BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002790
(881 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/689 (66%), Positives = 562/689 (81%), Gaps = 7/689 (1%)
Query: 12 FSPSNPSRPFSIITY--NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARV 69
F P N SR SII + NN +LD F+ LLQQC H +Q+H+Q+IVTG++ SAFLAARV
Sbjct: 852 FLP-NLSRSISIIHHQPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARV 910
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL 129
+S+YA FG + DA+ VFE +P +C S+ LLWNSILR NV++G E AL++Y +MRKLGV
Sbjct: 911 VSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVS 970
Query: 130 GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD 189
DGFTFPLVIRAC MGS + S VH HV++MGFQ N+H+ NEL+GMY K+G+M D
Sbjct: 971 ADGFTFPLVIRACALMGSRKLCRS----VHGHVVEMGFQWNLHVGNELMGMYGKIGRMDD 1026
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
+ K+F+++ V++ +SWN M SG+ALN+DC GA E+F+ M GLEPN VTWTSLLSSHAR
Sbjct: 1027 ARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHAR 1086
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFV 309
CG+ ETM+LF MR RGI AEA+AVVLSV DLAA GKVIHG+V+KGGFE+Y+FV
Sbjct: 1087 CGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFV 1146
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
KN+LIC+YGKHG+V A+ LF EI+ KNIVSWNALI+SYA+ G CDEA +F QLEK D
Sbjct: 1147 KNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDE 1206
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
M RPNV+SWSAVIG FAS G+GEEAL+LFR+MQLAKV ANSVTI+ +LSVCAE AAL+
Sbjct: 1207 YPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALH 1266
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
+GREIHGHVVR M+ NILV NGL+NMY K G +EG+LVFE+IE KDLI+WN+M++GYG
Sbjct: 1267 LGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYG 1326
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
++GLGENA+ TF++MI+ GF+PDGV FVAVLSACSHAGLV EGR +FD M++EFR+EPQM
Sbjct: 1327 IHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQM 1386
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
EHYACMVDLLGRAGLLQEAS +VK+MP+EPNA VWG LLNSCRMHKNT+VAE ASQIF
Sbjct: 1387 EHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFN 1446
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
L +E GSYMLLSNIYAASGRWED+AKVRISAKTKGLKK GQSWI+VK+K++MFS+GN+
Sbjct: 1447 LNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNT 1506
Query: 670 LQSDLKNVCEVLEELALQMENKGCVPDND 698
++L+ V +L++L LQME +G +PD D
Sbjct: 1507 QHAELEEVYRILKDLGLQMEVEGYIPDID 1535
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 72/142 (50%), Gaps = 35/142 (24%)
Query: 710 VKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRSTNGQLMKNKLKLGLVVFNLSLKLF 769
V R QRIR I R GFR L LLL + GQ+M++K++L L V +L+L++
Sbjct: 1626 VIRTQRIR---INGNGRW-GFRYAGL---LLLVGGAAYGQVMEDKVELRLGVLDLALEVT 1678
Query: 770 NDAVTATNRVISSDIRLENDSPHGLVLLRGLKVFDNFCNVTDTKQFMSVEELALAIMREI 829
+D V + V +D+RLEND VEELALA +R+I
Sbjct: 1679 DDTVATADGVGGADVRLEND----------------------------VEELALATVRKI 1710
Query: 830 RGENAVRSALPALVFTCSTSLG 851
RGENAVR A LVF SLG
Sbjct: 1711 RGENAVRGAFSTLVFASLASLG 1732
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 946 bits (2445), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/689 (66%), Positives = 562/689 (81%), Gaps = 7/689 (1%)
Query: 12 FSPSNPSRPFSIITY--NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARV 69
F P N SR SII + NN +LD F+ LLQQC H +Q+H+Q+IVTG++ SAFLAARV
Sbjct: 14 FLP-NLSRSISIIHHQPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARV 72
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL 129
+S+YA FG + DA+ VFE +P +C S+ LLWNSILR NV++G E AL++Y +MRKLGV
Sbjct: 73 VSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVS 132
Query: 130 GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD 189
DGFTFPLVIRAC MGS + S VH HV++MGFQ N+H+ NEL+GMY K+G+M D
Sbjct: 133 ADGFTFPLVIRACALMGSRKLCRS----VHGHVVEMGFQWNLHVGNELMGMYGKIGRMDD 188
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
+ K+F+++ V++ +SWN M SG+ALN+DC GA E+F+ M GLEPN VTWTSLLSSHAR
Sbjct: 189 ARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHAR 248
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFV 309
CG+ ETM+LF MR RGI AEA+AVVLSV DLAA GKVIHG+V+KGGFE+Y+FV
Sbjct: 249 CGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFV 308
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
KN+LIC+YGKHG+V A+ LF EI+ KNIVSWNALI+SYA+ G CDEA +F QLEK D
Sbjct: 309 KNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDE 368
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
M RPNV+SWSAVIG FAS G+GEEAL+LFR+MQLAKV ANSVTI+ +LSVCAE AAL+
Sbjct: 369 YPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALH 428
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
+GREIHGHVVR M+ NILV NGL+NMY K G +EG+LVFE+IE KDLI+WN+M++GYG
Sbjct: 429 LGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYG 488
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
++GLGENA+ TF++MI+ GF+PDGV FVAVLSACSHAGLV EGR +FD M++EFR+EPQM
Sbjct: 489 IHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQM 548
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
EHYACMVDLLGRAGLLQEAS +VK+MP+EPNA VWG LLNSCRMHKNT+VAE ASQIF
Sbjct: 549 EHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFN 608
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
L +E GSYMLLSNIYAASGRWED+AKVRISAKTKGLKK GQSWI+VK+K++MFS+GN+
Sbjct: 609 LNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNT 668
Query: 670 LQSDLKNVCEVLEELALQMENKGCVPDND 698
++L+ V +L++L LQME +G +PD D
Sbjct: 669 QHAELEEVYRILKDLGLQMEVEGYIPDID 697
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 95/152 (62%), Gaps = 9/152 (5%)
Query: 710 VKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRSTNGQLMKNKLKLGLVVFNLSLKLF 769
V R QRIR I R GFR L LLL + GQ+M++K++L L V +L+L++
Sbjct: 799 VIRTQRIR---INGNGRW-GFRYAGL---LLLVGGAAYGQVMEDKVELRLGVLDLALEVT 851
Query: 770 NDAVTATNRVISSDIRLENDSPHGLVLLRGLKVFDNFCNVTDTKQFMSVEELALAIMREI 829
+D V + V +D+RLEND HGLVL+R ++V D+ +V D KQFM+VEELALA +R+I
Sbjct: 852 DDTVATADGVGGADVRLENDGAHGLVLVRRVEVADDLGDVADPKQFMAVEELALATVRKI 911
Query: 830 RGENAVRSALPALVFTCSTSLGCAIATNSRNT 861
RGENAVR A LVF SLG TN N
Sbjct: 912 RGENAVRGAFSTLVFASLASLGT--VTNPWNA 941
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 945 bits (2442), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/689 (66%), Positives = 562/689 (81%), Gaps = 7/689 (1%)
Query: 12 FSPSNPSRPFSIITY--NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARV 69
F P N SR SII + NN +LD F+ LLQQC H +Q+H+Q+IVTG++ SAFLAARV
Sbjct: 14 FLP-NLSRSISIIHHQPNNDVLDFFNDLLQQCSKSHLSQQIHSQIIVTGSHRSAFLAARV 72
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL 129
+S+YA FG + DA+ VFE +P +C S+ LLWNSILR NV++G E AL++Y +MRKLGV
Sbjct: 73 VSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVS 132
Query: 130 GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD 189
DGFTFPLVIRAC MGS + S VH HV++MGFQ N+H+ NEL+GMY K+G+M D
Sbjct: 133 ADGFTFPLVIRACALMGSRKLCRS----VHGHVVEMGFQWNLHVGNELMGMYGKIGRMDD 188
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
+ K+F+++ V++ +SWN M SG+ALN+DC GA E+F+ M GLEPN VTWTSLLSSHAR
Sbjct: 189 ARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHAR 248
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFV 309
CG+ ETM+LF MR RGI AEA+AVVLSV DLAA GKVIHG+V+KGGFE+Y+FV
Sbjct: 249 CGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFV 308
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
KN+LIC+YGKHG+V A+ LF EI+ KNIVSWNALI+SYA+ G CDEA +F QLEK D
Sbjct: 309 KNSLICLYGKHGNVNAARILFLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDE 368
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
M RPNV+SWSAVIG FAS G+GEEAL+LFR+MQLAKV ANSVTI+ +LSVCAE AAL+
Sbjct: 369 YPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALH 428
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
+GREIHGHVVR M+ NILV NGL+NMY K G +EG+LVFE+IE KDLI+WN+M++GYG
Sbjct: 429 LGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYG 488
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
++GLGENA+ TF++MI+ GF+PDGV FVAVLSACSHAGLV EGR +FD M++EFR+EPQM
Sbjct: 489 IHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQM 548
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
EHYACMVDLLGRAGLLQEAS +VK+MP+EPNA VWG LLNSCRMHKNT+VAE ASQIF
Sbjct: 549 EHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFN 608
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
L +E GSYMLLSNIYAASGRWED+AKVRISAKTKGLKK GQSWI+VK+K++MFS+GN+
Sbjct: 609 LNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNT 668
Query: 670 LQSDLKNVCEVLEELALQMENKGCVPDND 698
++L+ V +L++L LQME +G +PD D
Sbjct: 669 QHAELEEVYRILKDLGLQMEVEGYIPDID 697
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/683 (61%), Positives = 535/683 (78%), Gaps = 8/683 (1%)
Query: 19 RPFSIITY--NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARF 76
+P +I++ N+ L+ F Q+C T+ Q +Q+H+QL++T A+ FLAAR++++YARF
Sbjct: 17 QPIFLISHVHNDELIYSFHAFFQRCFTLQQARQLHSQLVLTTAHRLPFLAARLIAVYARF 76
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
L AR VF+ P + LLWNSI+R NVS+G +++AL+LYV+MRKLG L DGFT P
Sbjct: 77 AFLSHARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQHALELYVEMRKLGFLPDGFTLP 136
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
LVIRAC +GS +IVH H LQMGF+ ++H+VNEL+GMY K+G+M D+ +LFD
Sbjct: 137 LVIRACSSLGSS----YLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQLFDG 192
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
+ V++ +SWN M SG+ALN D GA +FKRMELEGL+PN VTWTSLLSSHARCG +ET
Sbjct: 193 MFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDET 252
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
++LF +MR RGIE+GAEA+AVVLSVCAD+A GK IHG+V+KGG+EDY+FVKNALI
Sbjct: 253 LELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGT 312
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG--SMER 374
YGKH + A +F EI+ KN+VSWNALI+SYAE+GLCDEA F +EK D S+ R
Sbjct: 313 YGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVR 372
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
PNVISWSAVI FA GRGE++L+LFR+MQLAKV+AN VTIS +LSVCAE AALN+GRE+
Sbjct: 373 PNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGREL 432
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
HG+ +R M+ NILV NGL+NMYMKCG +EGHLVF+ IE +DLI+WNS+I GYGM+GLG
Sbjct: 433 HGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLG 492
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
ENAL TF EMI A KPD + FVA+LSACSHAGLV GR +FD MV EFRIEP +EHYAC
Sbjct: 493 ENALRTFNEMIRARMKPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYAC 552
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
MVDLLGRAGLL+EA+DIV+NMP+EPN YVWG LLNSCRM+K+ D+ E ASQI L ++
Sbjct: 553 MVDLLGRAGLLKEATDIVRNMPIEPNEYVWGALLNSCRMYKDMDIVEETASQILTLKSKI 612
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
TGS+MLLSNIYAA+GRW+D+A+VR+SA+TKGLKK+ GQSWIEV++K++ FS+GN + L
Sbjct: 613 TGSFMLLSNIYAANGRWDDSARVRVSARTKGLKKIPGQSWIEVRKKVYTFSAGNLVHFGL 672
Query: 675 KNVCEVLEELALQMENKGCVPDN 697
+++ +LEEL L M ++ D+
Sbjct: 673 EDIYVILEELNLHMASENYKLDS 695
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 99/257 (38%), Gaps = 56/257 (21%)
Query: 390 NGRGEEALDLFRKMQ---LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
N E LF + Q L V N I + L R++H +V + ++
Sbjct: 3 NAASERFRSLFSRFQPIFLISHVHNDELIYSFHAFFQRCFTLQQARQLHSQLVLTTAHRL 62
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD---LITWNSMISGYGMNGLGENALATFEE 503
+ L+ +Y + L VF+ I + L+ WNS+I +G ++AL + E
Sbjct: 63 PFLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRANVSHGYHQHALELYVE 122
Query: 504 MIEAGFKPDGVAFVAVLSACS----------------------HAGLVNE---------- 531
M + GF PDG V+ ACS H +VNE
Sbjct: 123 MRKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGR 182
Query: 532 ---GRRIFD-MMVREF-RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME---PNAYV 583
R++FD M VR + YA D LG AS + K M +E PN+
Sbjct: 183 MEDARQLFDGMFVRSIVSWNTMVSGYALNRDSLG-------ASRVFKRMELEGLQPNSVT 235
Query: 584 WGTLLNS---CRMHKNT 597
W +LL+S C ++ T
Sbjct: 236 WTSLLSSHARCGLYDET 252
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 857 bits (2213), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/670 (60%), Positives = 533/670 (79%), Gaps = 4/670 (0%)
Query: 21 FSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLF 80
FS ITY+ L D FDHLL+QC I KQVH+ +VTGA SAF++AR++SIY+R+G +
Sbjct: 28 FSSITYDEDLPDFFDHLLRQCNGIQHSKQVHSATVVTGAYCSAFVSARLVSIYSRYGLVS 87
Query: 81 DARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR 140
DAR VF +APF+C S+ LLWNSI+R NV +G AL+LY KMR GVLGDGFTFPL++R
Sbjct: 88 DARKVFGSAPFECYSNFLLWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLR 147
Query: 141 ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
A +G+F + + +H HV+Q GFQ ++H+ NELIGMYAK+ +M D+ K+FDK+R+K
Sbjct: 148 ASSNLGAF----NMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRIK 203
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
+ +SWN M SG+A N+D +GA +F +MELEG+EPN VTWTSLLSSHARCG LEETM LF
Sbjct: 204 SVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLF 263
Query: 261 DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
MR +G+ AE +AVVLSVCADLA + G++IHG+++KGGF DY+F KNALI +YGK
Sbjct: 264 CKMRMKGVGPTAEMLAVVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKG 323
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
G V A+ LF E++ KN+VSWNALI+S+AE+G+ D+A+E+ SQLEK++ +PNVI+W
Sbjct: 324 GGVGDAEKLFHEMKVKNLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITW 383
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
SA+I FAS G GEE+L++FRKMQLA V ANSVTI+ +LS+CA AALN+GRE+HGHV+R
Sbjct: 384 SAIICGFASKGLGEESLEVFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIR 443
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
M+ N+LV NGL+NMY KCG + G +VFE++E +D I+WNSMI+GYG +GLG++ALAT
Sbjct: 444 ARMDDNVLVGNGLINMYTKCGSFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALAT 503
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F MI++G++PDGV F+A LSACSHAGLV EG +F M + F+IEP++EHYACMVDLLG
Sbjct: 504 FNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLFSQMRQNFKIEPEIEHYACMVDLLG 563
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML 620
RAGL++EAS+I+K MPMEPNAY+W +LLNSCRMHK+TD+AE A++I L ++ TGS+ML
Sbjct: 564 RAGLVEEASNIIKGMPMEPNAYIWSSLLNSCRMHKDTDLAEEAAAKISNLNSKITGSHML 623
Query: 621 LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEV 680
LSNI+AAS RWED+A+VRISA+ KGLKKV G SWIEVK+K++MF +G ++ L+ V E+
Sbjct: 624 LSNIFAASCRWEDSARVRISARAKGLKKVPGWSWIEVKKKVYMFKAGYTISEGLEKVDEI 683
Query: 681 LEELALQMEN 690
L +LA Q+EN
Sbjct: 684 LHDLAFQIEN 693
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/579 (66%), Positives = 482/579 (83%), Gaps = 5/579 (0%)
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
+MRK+G LGDGFTFPLVIRAC +MGSF G+ +H HVL+MGFQ ++H+ NELIGMY
Sbjct: 32 RMRKIGTLGDGFTFPLVIRACAYMGSF----ILGKTIHGHVLEMGFQSHLHVGNELIGMY 87
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
AK+G+M D+ LFD++ V++YISWN M S +A N+DC+GALE+F+RME EG+EPN VTWT
Sbjct: 88 AKLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWT 147
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
SL+SS+AR G EE M+LF +MR +G+EV EA+AVV+S+CADL A K+IH + +KG
Sbjct: 148 SLISSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKG 207
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
GFE+Y FVK+ALICVYGKHGDV A NLF E++ K++ SWNALITS+AEAGLCDEA+E+F
Sbjct: 208 GFEEYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIF 267
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
SQLE+ RPNV+SWSA+I FAS GR +EAL+LFR+MQ AK++AN+VTIS +LS+
Sbjct: 268 SQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSL 327
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
CAE AAL++GREIHGHVVR M NILV NGL+NMY KCGCL+EGH++FE+ E+KDLI+W
Sbjct: 328 CAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISW 387
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
NSMI+GYGM+GLG NAL TF++MI+ GFKPDGV FVAVLS+CSH+GLV+EGRR+FD M++
Sbjct: 388 NSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLK 447
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
++RIEPQMEHYACMVDLLGRAGLL+EAS+IVKNMP+ PNA VWG LLNSCRMH NT++AE
Sbjct: 448 KYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGALLNSCRMHNNTEIAE 507
Query: 602 AMASQIFGLI-TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
AS +F L ETTG+YMLLSNIYAASGRWED+A+VR SAKTKGLKK GQSWI+V++
Sbjct: 508 ETASHLFNLSHRETTGTYMLLSNIYAASGRWEDSARVRTSAKTKGLKKNPGQSWIKVEKN 567
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDI 699
++ FS+GN++Q + + E+LEEL QME +G V D DI
Sbjct: 568 VYTFSAGNNMQRGFEQIFEILEELTFQMEREGTVHDTDI 606
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 203/392 (51%), Gaps = 44/392 (11%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP----------------- 90
K +H ++ G + + ++ +YA+ GR+ DAR++F+
Sbjct: 62 KTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLFDRMSVRSYISWNTMVSAYAFN 121
Query: 91 FDC---------------KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
+DC + + + W S++ +G +E A++L+ MR GV G
Sbjct: 122 YDCNGALEIFQRMESEGMEPNLVTWTSLISSYARSGWHEEAMELFGLMRMKGVEVSGEAL 181
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
+VI C +G+ F +I+H + ++ GF+ + + LI +Y K G ++ ++ LF
Sbjct: 182 AVVISICADLGA----FVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFL 237
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG----LEPNFVTWTSLLSSHARCG 251
+++ K+ SWN + + A CD ALE+F ++E G L PN V+W++++ A G
Sbjct: 238 EMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKG 297
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
R +E ++LF M+ I A I+ VLS+CA+LAA H+G+ IHG V++ + + V N
Sbjct: 298 REKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGN 357
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
L+ +Y K G +K +F + E K+++SWN++IT Y GL A+E F Q+ KL
Sbjct: 358 GLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGF-- 415
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+P+ +++ AV+ + + +G E LF +M
Sbjct: 416 --KPDGVTFVAVLSSCSHSGLVHEGRRLFDQM 445
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 1/171 (0%)
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
R+M+ + + T ++ CA + +G+ IHGHV+ + ++ V N L+ MY K
Sbjct: 31 RRMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKL 90
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
G + + +F+++ + I+WN+M+S Y N AL F+ M G +P+ V + +++
Sbjct: 91 GRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLI 150
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
S+ + +G E +F +M R +E E A ++ + G A I
Sbjct: 151 SSYARSGWHEEAMELFGLM-RMKGVEVSGEALAVVISICADLGAFVRAKII 200
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
L + +H +++H ++ + + ++++YA+ G L + +FE +
Sbjct: 327 LCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTE---RKD 383
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+ WNS++ +GL NAL+ + +M KLG DG TF V+ +C G
Sbjct: 384 LISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSG 433
>gi|15220808|ref|NP_173207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75175206|sp|Q9LNP2.1|PPR47_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g17630
gi|8778465|gb|AAF79473.1|AC022492_17 F1L3.33 [Arabidopsis thaliana]
gi|332191495|gb|AEE29616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 731
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/699 (53%), Positives = 500/699 (71%), Gaps = 13/699 (1%)
Query: 13 SPSNPS-RPFSIITYNN--SLLDCFDHLLQQCKTIHQLKQVHNQLIVTG-ANASAFLAAR 68
SP S + +T NN SL FDHLL C T Q +QVH Q++++ S LAA
Sbjct: 35 SPDTVSVSSYYSLTSNNDQSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAAN 94
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S+YAR G L DARNVFET S LWNSIL+ NVS+GLYENAL+LY MR+ G+
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
GDG+ PL++RAC+++G RF + H V+Q+G + N+H+VNEL+ +Y K G+M
Sbjct: 155 TGDGYILPLILRACRYLG----RFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMG 210
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
D++ LF ++ V+N +SWN+M GF+ +DC+ A+++F+ M+ E +P+ VTWTS+LS H+
Sbjct: 211 DAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHS 270
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+CG+ E+ + F +MR G V EA+AV SVCA+L A + + +HG+VIKGGFE+Y+
Sbjct: 271 QCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLP 330
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
+NALI VYGK G VK A++LF +I K I SWN+LITS+ +AG DEA+ +FS+LE+++
Sbjct: 331 SRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMN 390
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
+ NV++W++VI GRG+++L+ FR+MQ +KV+ANSVTI +LS+CAE AL
Sbjct: 391 HVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPAL 450
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
N+GREIHGHV+R SM++NILVQN L+NMY KCG L EG LVFE I KDLI+WNS+I GY
Sbjct: 451 NLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGY 510
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
GM+G E AL+ F+ MI +GF PDG+A VAVLSACSHAGLV +GR IF M + F +EPQ
Sbjct: 511 GMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQ 570
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
EHYAC+VDLLGR G L+EAS+IVKNMPMEP V G LLNSCRMHKN D+AE +ASQ+
Sbjct: 571 QEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLS 630
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L E TGSYMLLSNIY+A GRWE++A VR AK K LKKV+G SWIEVK+K + FSSG+
Sbjct: 631 VLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGS 690
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVPD-----NDIILW 702
+QS+ + + VLE+L M KG D +D+ LW
Sbjct: 691 IVQSEFETIYPVLEDLVSHMLKKGPTHDGNNYEDDLDLW 729
>gi|297844718|ref|XP_002890240.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336082|gb|EFH66499.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/683 (53%), Positives = 490/683 (71%), Gaps = 6/683 (0%)
Query: 18 SRPFSIITYNN-SLLDCFDHLLQQCKTIHQLKQVHNQLIVTGA-NASAFLAARVLSIYAR 75
S +S+ T N+ SL DHLL+ C T Q KQVH Q++V+ S LAA +S+Y+R
Sbjct: 42 SSYYSLTTNNDQSLFHNLDHLLRLCLTAQQCKQVHAQVLVSDYIYRSGSLAANFVSVYSR 101
Query: 76 FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
G L DARNVFET S LWNSIL+ NVS+GLYENA +LY MR+ G+ GDGF
Sbjct: 102 LGLLLDARNVFETVSLVLWSDLRLWNSILKANVSHGLYENAFELYRGMRERGLTGDGFIL 161
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
PL++RAC+++G RF + H+ V+Q+G + N+H+ NEL+ +Y K ++ D++ LF
Sbjct: 162 PLILRACRYLG----RFGLCRAFHSQVIQIGLKENLHVANELLTLYPKAARIGDAYNLFV 217
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ V+N +SWN+M GF+ FDC+ A+++F+ M+ E +P+ VTWTSLLS H++CG+ E+
Sbjct: 218 EMPVRNRMSWNVMIKGFSQEFDCESAVKIFEWMQREDFKPDEVTWTSLLSCHSQCGKFED 277
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
+ F +MR V EA+AV SVCA+L A + +HGFVIKGGFE+ + +NALI
Sbjct: 278 VIKYFHVMRMSASAVSGEALAVFFSVCAELGALSIADKVHGFVIKGGFEECLPSRNALIH 337
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
VYGK G VK A+ LF +I K I SWN+LITS+ +AG DEA+ +F++LE++D +
Sbjct: 338 VYGKQGKVKDAEQLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFTELEEMDDVCNVKA 397
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH 435
NV++W++VI GRG+ +L+ FR+MQ +KV++NSVTI +LS+CAE ALN+GREIH
Sbjct: 398 NVVTWTSVIKGCNVQGRGDYSLEYFRRMQFSKVLSNSVTICCILSICAELPALNLGREIH 457
Query: 436 GHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
GHV+R SM+ NILVQN L+NMY KCG L EG LVFE I KDLI+WNS+I GYGM+G GE
Sbjct: 458 GHVIRTSMSDNILVQNALVNMYTKCGLLREGSLVFEAIRDKDLISWNSIIKGYGMHGFGE 517
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
AL+ F+ MI++G PDG+A VAVLSACSHAGLV +GR+IF M + F +EPQ EHYAC+
Sbjct: 518 KALSMFDRMIKSGCHPDGIALVAVLSACSHAGLVEKGRKIFYSMSKRFGLEPQQEHYACI 577
Query: 556 VDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETT 615
VDLLGR G L+EAS+IVKNMPMEP V G LLNSCRMHKN D+AE +ASQ+ L E T
Sbjct: 578 VDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNMDIAEIIASQLRVLEPERT 637
Query: 616 GSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLK 675
GSYMLLSNIY+A GRWE++AKVR AK K LKKV+G SWIE+K+KI+ FSSG+ +QS+
Sbjct: 638 GSYMLLSNIYSAGGRWEESAKVRALAKKKDLKKVSGSSWIELKKKIYKFSSGSIVQSEFA 697
Query: 676 NVCEVLEELALQMENKGCVPDND 698
++ VLE+L M +G D +
Sbjct: 698 SIYPVLEDLVSHMVKEGPTHDGN 720
>gi|330689867|gb|AEC33263.1| putative pentatricopeptide protein [Triticum aestivum]
Length = 644
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 273/626 (43%), Positives = 399/626 (63%), Gaps = 23/626 (3%)
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG-VLGDGFTFPLVIRACK 143
+ + P C ++ WN +LR ++ + AL LY +MR L L + +T PL +RA
Sbjct: 31 IRDLPPTTC---AVPWNRLLRAHICRSRPDLALALYRRMRALSPTLPNSYTLPLALRAAT 87
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN-Y 202
+H H L +G + + +L+ YA+ G+ ++ +FD + K
Sbjct: 88 S--------PIASAIHAHALHLGLHAHPDVAGQLLAAYARHGRADEAHHVFDAMPSKRAT 139
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLE-PNFVTWTSLLSSHARCGRLEETMDLFD 261
+SWN + S +++ D + A+ F RM G P+ VTWT+LLS+HARCG+ ++LF
Sbjct: 140 MSWNTLISAYSVCCDPNNAMATFARMAAAGEALPDAVTWTTLLSAHARCGKHPVVLELFG 199
Query: 262 MMRKRGIEVGAEAIAVVLSVCA---DLAADHMGKVIHGF-VIKGGFEDYVFVKNALICVY 317
M + G E AE++AV LS C DLA G+ IHG+ V KG Y+FV N+L+C+Y
Sbjct: 200 DMHRSGCEGNAESVAVALSACPYAGDLALAK-GRAIHGYGVAKGVVRGYLFVTNSLVCMY 258
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
GK G + A+ +F E E+N V+WNALITSYA AG+CDEA+ V ++E+ G M PNV
Sbjct: 259 GKLGKMDDAREVFREAGERNTVTWNALITSYAAAGMCDEALNVLVRMEQR--GGMVAPNV 316
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
+SWSAVIG FAS+G E AL+LFR+MQ + N VT++ +LS C E A+ +GRE+H
Sbjct: 317 MSWSAVIGGFASSGDNERALELFRRMQQQWLSPNVVTLATVLSACTEQLAVRLGREVHAD 376
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
+R ++++ LV NGL+NMY KCG + + VF+ ++ +DL++WNSM++GYGM+GL ++A
Sbjct: 377 AIRSMVDRHSLVANGLINMYAKCGRVADARTVFDGMKSRDLVSWNSMLAGYGMHGLCDDA 436
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
LA F +M EA PDGV FVAVLSACSHAG V+EGRR+FD M+ E +I P MEHY CMVD
Sbjct: 437 LAVFTDMAEAKVDPDGVTFVAVLSACSHAGRVSEGRRLFDQMILEHKISPSMEHYTCMVD 496
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
LLGRAGLL+EAS+ ++ MPM + VWG LLNSCR+H + +AEA ++ TTG+
Sbjct: 497 LLGRAGLLKEASEFIETMPMGADLCVWGALLNSCRIHGDAAMAEATIAKALQAGVVTTGN 556
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS--DLK 675
+ L++N+YAA G W+D+ +VR+ + GL+K GQSW+EVK K+ F +G+ S +
Sbjct: 557 HTLITNLYAACGMWDDSKRVRVMTREAGLRKNPGQSWVEVKNKVFAFMAGSVPPSMPRAE 616
Query: 676 NVCEVLEELALQMENKGCVPDNDIIL 701
+V VL++L +M+++ + D I+
Sbjct: 617 DVFRVLDDLYREMDDQRRAIEEDHIV 642
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/535 (23%), Positives = 243/535 (45%), Gaps = 88/535 (16%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPF------------------ 91
+H + G +A +A ++L+ YAR GR +A +VF+ P
Sbjct: 94 IHAHALHLGLHAHPDVAGQLLAAYARHGRADEAHHVFDAMPSKRATMSWNTLISAYSVCC 153
Query: 92 ----------------DCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
+ ++ W ++L + G + L+L+ M + G G+ +
Sbjct: 154 DPNNAMATFARMAAAGEALPDAVTWTTLLSAHARCGKHPVVLELFGDMHRSGCEGNAESV 213
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMG-FQGNVHIVNELIGMYAKMGQMSDSFKLF 194
+ + AC + G + G+ +H + + G +G + + N L+ MY K+G+M D+ ++F
Sbjct: 214 AVALSACPYAGD--LALAKGRAIHGYGVAKGVVRGYLFVTNSLVCMYGKLGKMDDAREVF 271
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG--LEPNFVTWTSLLSSHARCGR 252
+ +N ++WN + + +A CD AL + RME G + PN ++W++++ A G
Sbjct: 272 REAGERNTVTWNALITSYAAAGMCDEALNVLVRMEQRGGMVAPNVMSWSAVIGGFASSGD 331
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
E ++LF M+++ + +A VLS C + A +G+ +H I+ + + V N
Sbjct: 332 NERALELFRRMQQQWLSPNVVTLATVLSACTEQLAVRLGREVHADAIRSMVDRHSLVANG 391
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL--EKLDGG 370
LI +Y K G V A+ +F ++ +++VSWN+++ Y GLCD+A+ VF+ + K+D
Sbjct: 392 LINMYAKCGRVADARTVFDGMKSRDLVSWNSMLAGYGMHGLCDDALAVFTDMAEAKVD-- 449
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
P+ +++ AV+ A + GR E LF +M L
Sbjct: 450 ----PDGVTFVAVLSACSHAGRVSEGRRLFDQMILE------------------------ 481
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE-KKDLITWNSMISGYG 489
H + SM ++++ + G L+E E + DL W ++++
Sbjct: 482 ------HKISPSMEHYTC----MVDLLGRAGLLKEASEFIETMPMGADLCVWGALLNSCR 531
Query: 490 MNGLGENALATFEEMIEAGFKPDG--VAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
++G A AT + ++AG G + +AC G+ ++ +R+ +M RE
Sbjct: 532 IHGDAAMAEATIAKALQAGVVTTGNHTLITNLYAAC---GMWDDSKRV-RVMTRE 582
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 117/254 (46%), Gaps = 23/254 (9%)
Query: 22 SIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFD 81
+++T L C + L + ++VH I + + + +A ++++YA+ GR+ D
Sbjct: 350 NVVTLATVLSACTEQL-----AVRLGREVHADAIRSMVDRHSLVANGLINMYAKCGRVAD 404
Query: 82 ARNVFETAPFDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR 140
AR VF+ KS L+ WNS+L +GL ++AL ++ M + V DG TF V+
Sbjct: 405 ARTVFD----GMKSRDLVSWNSMLAGYGMHGLCDDALAVFTDMAEAKVDPDGVTFVAVLS 460
Query: 141 ACKFMGSF-RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV 199
AC G R F Q++ H + + +V +L+G + G + ++ + + + +
Sbjct: 461 ACSHAGRVSEGRRLFDQMILEHKISPSMEHYTCMV-DLLG---RAGLLKEASEFIETMPM 516
Query: 200 -KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT---WTSLLSSHARCGRLEE 255
+ W + + ++ D A + L+ VT T + + +A CG ++
Sbjct: 517 GADLCVWGALLNSCRIHGDAAMAEATIAK----ALQAGVVTTGNHTLITNLYAACGMWDD 572
Query: 256 TMDLFDMMRKRGIE 269
+ + M R+ G+
Sbjct: 573 SKRVRVMTREAGLR 586
>gi|414875841|tpg|DAA52972.1| TPA: hypothetical protein ZEAMMB73_038558 [Zea mays]
Length = 641
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/611 (44%), Positives = 400/611 (65%), Gaps = 18/611 (2%)
Query: 90 PFDCKS---SSLLWNSILRVNVSNGLYENALKLYVKMRKLG-VLGDGFTFPLVIRACKFM 145
P C S++ WN +LR +++ AL LY MR L L + +T PL +RA
Sbjct: 26 PIRCHPPTDSAVPWNKLLRDHIAGSRPGLALALYRLMRALSPALPNSYTLPLALRAAP-- 83
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYIS 204
S+R +VH H L +G + + +++ YA++G+ +++ +FD + ++ + +S
Sbjct: 84 -SWRL----AAVVHGHALHLGLHTHPDVAGQVLAAYARLGRAAEARCVFDALPLRRSTLS 138
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
WN + S ++ D D A F RM G P+ VTWT+LLS+HARCGR E + L M
Sbjct: 139 WNTLISAYSAGCDPDAAWVAFARMVAAGARPDAVTWTALLSAHARCGRHPEALRLLGAMH 198
Query: 265 KRGIEVGAEAIAVVLSVC--ADLAADHMGKVIHGF-VIKGGFEDYVFVKNALICVYGKHG 321
+ G E AEA+AV LS C A A G+ IH + +KG Y+FV N+L+C+YGK G
Sbjct: 199 RSGCEGNAEAVAVALSACPYAGGPALGRGRSIHAYGFVKGVVHGYLFVTNSLVCMYGKLG 258
Query: 322 DVKVAQNLFSEI-EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
+++ A+ +F + +KN V+WNALITSYA AGLC +A+ V +Q+E+ G M PNV+SW
Sbjct: 259 EMEEAEKVFWDAGAKKNAVTWNALITSYAAAGLCGKALGVLAQMEQC--GGMVAPNVVSW 316
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
SAVIG FAS+G E+AL L R+MQ ++ N+VT++ +LS C + AL +G+E+HGH ++
Sbjct: 317 SAVIGGFASSGDMEQALQLCRQMQQQWLLPNAVTLATVLSACTQLLALRLGQEVHGHTIK 376
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
+++++ LVQNGL+N Y KCG + VF+ ++ +DLI+WNSMI YG +G+ + ALA
Sbjct: 377 AALDRHSLVQNGLVNTYGKCGKVATARKVFDGMKSRDLISWNSMIGSYGAHGMCDEALAM 436
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F+++ A +PDGV FVAVLSACSH G V EGRR+FD MVRE +I P MEHY CMVDLLG
Sbjct: 437 FQDLTRALIEPDGVTFVAVLSACSHTGRVAEGRRLFDQMVREHKISPTMEHYTCMVDLLG 496
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML 620
RAGLL+ A +++ MPM+P+ VWG LLNSCR+H + +AEA +++ T TTG+ L
Sbjct: 497 RAGLLRGACELIDTMPMKPDLCVWGALLNSCRIHGDAALAEAAMAKVLQAETATTGNRTL 556
Query: 621 LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEV 680
++N+YAA G W+D+ +VR++ K GL+K GQSWIEV+ K+ F++ ++ S+ + V V
Sbjct: 557 ITNLYAACGMWDDSKRVRMTMKEAGLRKNPGQSWIEVRNKVFAFTAWSAPPSEAEEVFRV 616
Query: 681 LEELALQMENK 691
L++L +M+++
Sbjct: 617 LDDLYGEMKDE 627
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 190/391 (48%), Gaps = 43/391 (10%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPF------------------ 91
VH + G + +A +VL+ YAR GR +AR VF+ P
Sbjct: 91 VHGHALHLGLHTHPDVAGQVLAAYARLGRAAEARCVFDALPLRRSTLSWNTLISAYSAGC 150
Query: 92 ---------------DCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
+ ++ W ++L + G + AL+L M + G G+
Sbjct: 151 DPDAAWVAFARMVAAGARPDAVTWTALLSAHARCGRHPEALRLLGAMHRSGCEGNAEAVA 210
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMG-FQGNVHIVNELIGMYAKMGQMSDSFKLF- 194
+ + AC + G G+ +H + G G + + N L+ MY K+G+M ++ K+F
Sbjct: 211 VALSACPYAGG--PALGRGRSIHAYGFVKGVVHGYLFVTNSLVCMYGKLGEMEEAEKVFW 268
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG--LEPNFVTWTSLLSSHARCGR 252
D KN ++WN + + +A C AL + +ME G + PN V+W++++ A G
Sbjct: 269 DAGAKKNAVTWNALITSYAAAGLCGKALGVLAQMEQCGGMVAPNVVSWSAVIGGFASSGD 328
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
+E+ + L M+++ + A +A VLS C L A +G+ +HG IK + + V+N
Sbjct: 329 MEQALQLCRQMQQQWLLPNAVTLATVLSACTQLLALRLGQEVHGHTIKAALDRHSLVQNG 388
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
L+ YGK G V A+ +F ++ ++++SWN++I SY G+CDEA+ +F L + ++
Sbjct: 389 LVNTYGKCGKVATARKVFDGMKSRDLISWNSMIGSYGAHGMCDEALAMFQDLTR----AL 444
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
P+ +++ AV+ A + GR E LF +M
Sbjct: 445 IEPDGVTFVAVLSACSHTGRVAEGRRLFDQM 475
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 87/187 (46%), Gaps = 14/187 (7%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C + L+ +VH I + + + +++ Y + G++ AR VF+
Sbjct: 354 VLSACTQLLALRLGQEVHGHTIKAALDRHSLVQNGLVNTYGKCGKVATARKVFD----GM 409
Query: 94 KSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFR 151
KS L+ WNS++ ++G+ + AL ++ + + + DG TF V+ AC G R
Sbjct: 410 KSRDLISWNSMIGSYGAHGMCDEALAMFQDLTRALIEPDGVTFVAVLSACSHTGRVAEGR 469
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFS 210
F Q+V H + + +V +L+G + G + + +L D + +K + W + +
Sbjct: 470 RLFDQMVREHKISPTMEHYTCMV-DLLG---RAGLLRGACELIDTMPMKPDLCVWGALLN 525
Query: 211 GFALNFD 217
++ D
Sbjct: 526 SCRIHGD 532
>gi|297596280|ref|NP_001042300.2| Os01g0197500 [Oryza sativa Japonica Group]
gi|255672971|dbj|BAF04214.2| Os01g0197500 [Oryza sativa Japonica Group]
Length = 906
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 268/605 (44%), Positives = 398/605 (65%), Gaps = 18/605 (2%)
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLG-VLGDGFTFPLVIRACKFMGSFRFRFS 153
+S++ WN +LR ++ + AL LY +MR L L + +T PL +RA S R
Sbjct: 310 TSAVPWNRLLRAHLGRSRGDLALALYRRMRALSPALPNSYTLPLALRAA---ASPRV--- 363
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV-KNYISWNMMFSGF 212
VH H L +G + +++ Y+++G+ +D+ ++FD + + WN + S +
Sbjct: 364 -ASAVHAHALHLGLHAQHDVAGQILAAYSRLGRAADARRVFDAMPPGRTTFHWNALISAY 422
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
+ D D A + F RM G P+ VTWT+LLS+HAR G+ + + LF M++ G E A
Sbjct: 423 SSGCDPDAARDAFARMAAAGARPDAVTWTALLSAHARSGKHADVLQLFGEMQRSGCEGNA 482
Query: 273 EAIAVVLSVCA---DLAADHMGKVIHGF-VIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
E++AV LS C DLA GK IHG V+KG Y+FV N+LIC+YGK G++ A+
Sbjct: 483 ESMAVALSACPYAGDLALAK-GKAIHGCGVVKGLMHGYLFVTNSLICMYGKLGEMDDAKK 541
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
F + KN V+WN LITSYA A LCD+A++V +Q+E++ GG++ PNV+SWSAVIG FA
Sbjct: 542 AFRDATAKNTVTWNTLITSYAAARLCDKALDVLAQMEQI-GGTVA-PNVVSWSAVIGGFA 599
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
S+G + AL+LFR+MQ + N VT++ +LS C + AL +GRE+HGH ++ ++++ L
Sbjct: 600 SSGDTDRALELFRRMQQQWLSPNVVTMATVLSACVDLLALRLGRELHGHAMKAELDRHSL 659
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
V+NGL+NMY KCG + VF+ ++ +DLI+WNSM++GYGM+GL + ALA F +M A
Sbjct: 660 VENGLINMYAKCGKVSGARKVFDGMKTRDLISWNSMLAGYGMHGLCDEALALFTDMAGAT 719
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+PDGV FVAVLSAC HAG V EGRR+FD MVR +I P MEHY CMV LLGRAGLL++A
Sbjct: 720 VEPDGVTFVAVLSACGHAGRVTEGRRLFDRMVRAHKISPSMEHYTCMVYLLGRAGLLRDA 779
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
S++V+ MP+ P+ VWG LLNSCR+H + +AEA + + ++TG++ML++N+YA
Sbjct: 780 SELVETMPVRPDLCVWGALLNSCRIHGDAAMAEATIANVLQSEDQSTGNHMLITNLYAMC 839
Query: 629 GRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ--SDLKNVCEVLEELAL 686
G W+++ KVR+ K GL+K GQSWIEV K+ F++G++ + ++V +L++L
Sbjct: 840 GMWDESKKVRVMTKEAGLRKNPGQSWIEVDNKVVAFAAGSAPPNLTGAEDVFGMLDDLYA 899
Query: 687 QMENK 691
+ME++
Sbjct: 900 EMEDE 904
Score = 192 bits (489), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 201/400 (50%), Gaps = 42/400 (10%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP------------------- 90
VH + G +A +A ++L+ Y+R GR DAR VF+ P
Sbjct: 367 VHAHALHLGLHAQHDVAGQILAAYSRLGRAADARRVFDAMPPGRTTFHWNALISAYSSGC 426
Query: 91 --------------FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
+ ++ W ++L + +G + + L+L+ +M++ G G+ +
Sbjct: 427 DPDAARDAFARMAAAGARPDAVTWTALLSAHARSGKHADVLQLFGEMQRSGCEGNAESMA 486
Query: 137 LVIRACKFMGSFRFRFSFGQIVHN-HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
+ + AC + G + G+ +H V++ G + + N LI MY K+G+M D+ K F
Sbjct: 487 VALSACPYAGD--LALAKGKAIHGCGVVKGLMHGYLFVTNSLICMYGKLGEMDDAKKAFR 544
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG--LEPNFVTWTSLLSSHARCGRL 253
KN ++WN + + +A CD AL++ +ME G + PN V+W++++ A G
Sbjct: 545 DATAKNTVTWNTLITSYAAARLCDKALDVLAQMEQIGGTVAPNVVSWSAVIGGFASSGDT 604
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
+ ++LF M+++ + +A VLS C DL A +G+ +HG +K + + V+N L
Sbjct: 605 DRALELFRRMQQQWLSPNVVTMATVLSACVDLLALRLGRELHGHAMKAELDRHSLVENGL 664
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
I +Y K G V A+ +F ++ ++++SWN+++ Y GLCDEA+ +F+ + G+
Sbjct: 665 INMYAKCGKVSGARKVFDGMKTRDLISWNSMLAGYGMHGLCDEALALFTDM----AGATV 720
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
P+ +++ AV+ A GR E LF +M A ++ S+
Sbjct: 721 EPDGVTFVAVLSACGHAGRVTEGRRLFDRMVRAHKISPSM 760
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 22 SIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFD 81
+++T L C D L + +++H + + + + ++++YA+ G++
Sbjct: 622 NVVTMATVLSACVDLL-----ALRLGRELHGHAMKAELDRHSLVENGLINMYAKCGKVSG 676
Query: 82 ARNVFETAPFDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR 140
AR VF+ K+ L+ WNS+L +GL + AL L+ M V DG TF V+
Sbjct: 677 ARKVFD----GMKTRDLISWNSMLAGYGMHGLCDEALALFTDMAGATVEPDGVTFVAVLS 732
Query: 141 ACKFMGSF-RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV 199
AC G R F ++V H + + +V L+G + G + D+ +L + + V
Sbjct: 733 ACGHAGRVTEGRRLFDRMVRAHKISPSMEHYTCMV-YLLG---RAGLLRDASELVETMPV 788
Query: 200 K-NYISWNMMFSGFALNFD 217
+ + W + + ++ D
Sbjct: 789 RPDLCVWGALLNSCRIHGD 807
>gi|125524780|gb|EAY72894.1| hypothetical protein OsI_00769 [Oryza sativa Indica Group]
Length = 569
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 261/577 (45%), Positives = 382/577 (66%), Gaps = 18/577 (3%)
Query: 123 MRKLG-VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
MR L L + +T PL +RA S R VH H L +G + +++ Y
Sbjct: 1 MRALSPALPNSYTLPLALRAA---ASPRV----ASAVHAHALHLGLHAQHDVAGQILAAY 53
Query: 182 AKMGQMSDSFKLFDKVRV-KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
+++G+ +D+ ++FD + + WN + S ++ D D A + F RM G P+ VTW
Sbjct: 54 SRLGRAADARRVFDAMPPGRTTFHWNALISAYSSGCDPDAARDAFARMAAAGTRPDAVTW 113
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC---ADLAADHMGKVIHGF 297
T+LLS+HAR G+ + + LF M++ G E AE++AV LS C DLA GK IHG
Sbjct: 114 TALLSAHARSGKHADVLQLFGEMQRSGCEGNAESMAVALSACPYAGDLALAK-GKAIHGC 172
Query: 298 -VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
V+KG Y+FV N+LIC+YGK G++ A+ F + KN V+WN LITSYA AGLCDE
Sbjct: 173 GVVKGLMHGYLFVTNSLICMYGKLGEMDDAKKAFRDATAKNTVTWNTLITSYAAAGLCDE 232
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
A++V +Q+E++ GG++ PNV+SWSAVIG FAS+G + AL+LFR+MQ + N VT++
Sbjct: 233 ALDVLAQMEQI-GGTVA-PNVVSWSAVIGGFASSGDTDRALELFRRMQQQWLSPNVVTMA 290
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
+LS C + AL +GRE+HGH ++ ++++ LV+NGL+NMY KCG + VF+ ++ +
Sbjct: 291 TVLSACVDLLALRLGRELHGHAMKAELDRHSLVENGLINMYAKCGKVSGARKVFDGMKTR 350
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
DLI+WNSM++GYGM+GL + ALA F +M A +PDGV FVAVLSAC HAG V EGRR+F
Sbjct: 351 DLISWNSMLAGYGMHGLCDEALALFTDMAGATVEPDGVTFVAVLSACGHAGRVTEGRRLF 410
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
D MVR +I P MEHY CMV LLGRAGLL++AS++V+ MP+ P+ VWG LLNSCR+H +
Sbjct: 411 DRMVRAHKISPSMEHYTCMVYLLGRAGLLRDASELVETMPVRPDLCVWGALLNSCRIHGD 470
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
+AEA + + ++TG++ML++N+YA G W+++ KVR+ K GL+K GQSWIE
Sbjct: 471 AAMAEATIANVLQSEDQSTGNHMLITNLYAMCGMWDESKKVRVMTKEAGLRKNPGQSWIE 530
Query: 657 VKRKIHMFSSGNSLQ--SDLKNVCEVLEELALQMENK 691
V K+ F++G++ + ++V +L++L +ME++
Sbjct: 531 VDNKVVAFAAGSAPPNLTGAEDVFGMLDDLYAEMEDE 567
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 200/400 (50%), Gaps = 42/400 (10%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP------------------- 90
VH + G +A +A ++L+ Y+R GR DAR VF+ P
Sbjct: 30 VHAHALHLGLHAQHDVAGQILAAYSRLGRAADARRVFDAMPPGRTTFHWNALISAYSSGC 89
Query: 91 --------------FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
+ ++ W ++L + +G + + L+L+ +M++ G G+ +
Sbjct: 90 DPDAARDAFARMAAAGTRPDAVTWTALLSAHARSGKHADVLQLFGEMQRSGCEGNAESMA 149
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGF-QGNVHIVNELIGMYAKMGQMSDSFKLFD 195
+ + AC + G + G+ +H + G G + + N LI MY K+G+M D+ K F
Sbjct: 150 VALSACPYAGD--LALAKGKAIHGCGVVKGLMHGYLFVTNSLICMYGKLGEMDDAKKAFR 207
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG--LEPNFVTWTSLLSSHARCGRL 253
KN ++WN + + +A CD AL++ +ME G + PN V+W++++ A G
Sbjct: 208 DATAKNTVTWNTLITSYAAAGLCDEALDVLAQMEQIGGTVAPNVVSWSAVIGGFASSGDT 267
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
+ ++LF M+++ + +A VLS C DL A +G+ +HG +K + + V+N L
Sbjct: 268 DRALELFRRMQQQWLSPNVVTMATVLSACVDLLALRLGRELHGHAMKAELDRHSLVENGL 327
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
I +Y K G V A+ +F ++ ++++SWN+++ Y GLCDEA+ +F+ + G+
Sbjct: 328 INMYAKCGKVSGARKVFDGMKTRDLISWNSMLAGYGMHGLCDEALALFTDM----AGATV 383
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
P+ +++ AV+ A GR E LF +M A ++ S+
Sbjct: 384 EPDGVTFVAVLSACGHAGRVTEGRRLFDRMVRAHKISPSM 423
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 25/272 (9%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
W++++ S+G + AL+L+ +M++ + + T V+ AC + + R G+ +H
Sbjct: 254 WSAVIGGFASSGDTDRALELFRRMQQQWLSPNVVTMATVLSACVDLLALR----LGRELH 309
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
H ++ + + N LI MYAK G++S + K+FD ++ ++ ISWN M +G+ ++ CD
Sbjct: 310 GHAMKAELDRHSLVENGLINMYAKCGKVSGARKVFDGMKTRDLISWNSMLAGYGMHGLCD 369
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVV 278
AL LF M +EP+ VT+ ++LS+ GR+ E LFD M+R I E +
Sbjct: 370 EALALFTDMAGATVEPDGVTFVAVLSACGHAGRVTEGRRLFDRMVRAHKISPSMEHYTCM 429
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK-------HGDVKVAQNLFS 331
+ + +G+ G + +CV+G HGD +A+ +
Sbjct: 430 VYL--------LGRA--GLLRDASELVETMPVRPDLCVWGALLNSCRIHGDAAMAEATIA 479
Query: 332 EI--EEKNIVSWNALITS-YAEAGLCDEAVEV 360
+ E + LIT+ YA G+ DE+ +V
Sbjct: 480 NVLQSEDQSTGNHMLITNLYAMCGMWDESKKV 511
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 22 SIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFD 81
+++T L C D L + +++H + + + + ++++YA+ G++
Sbjct: 285 NVVTMATVLSACVDLL-----ALRLGRELHGHAMKAELDRHSLVENGLINMYAKCGKVSG 339
Query: 82 ARNVFETAPFDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR 140
AR VF+ K+ L+ WNS+L +GL + AL L+ M V DG TF V+
Sbjct: 340 ARKVFD----GMKTRDLISWNSMLAGYGMHGLCDEALALFTDMAGATVEPDGVTFVAVLS 395
Query: 141 ACKFMGSF-RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV 199
AC G R F ++V H + + +V L+G + G + D+ +L + + V
Sbjct: 396 ACGHAGRVTEGRRLFDRMVRAHKISPSMEHYTCMVY-LLG---RAGLLRDASELVETMPV 451
Query: 200 K-NYISWNMMFSGFALNFD 217
+ + W + + ++ D
Sbjct: 452 RPDLCVWGALLNSCRIHGD 470
>gi|56201767|dbj|BAD73217.1| hypothetical protein [Oryza sativa Japonica Group]
gi|56201874|dbj|BAD73324.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125569384|gb|EAZ10899.1| hypothetical protein OsJ_00742 [Oryza sativa Japonica Group]
Length = 569
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 259/577 (44%), Positives = 381/577 (66%), Gaps = 18/577 (3%)
Query: 123 MRKLG-VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
MR L L + +T PL +RA S R VH H L +G + +++ Y
Sbjct: 1 MRALSPALPNSYTLPLALRAA---ASPRV----ASAVHAHALHLGLHAQHDVAGQILAAY 53
Query: 182 AKMGQMSDSFKLFDKVRV-KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
+++G+ +D+ ++FD + + WN + S ++ D D A + F RM G P+ VTW
Sbjct: 54 SRLGRAADARRVFDAMPPGRTTFHWNALISAYSSGCDPDAARDAFARMAAAGARPDAVTW 113
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC---ADLAADHMGKVIHGF 297
T+LLS+HAR G+ + + LF M++ G E AE++AV LS C DLA GK IHG
Sbjct: 114 TALLSAHARSGKHADVLQLFGEMQRSGCEGNAESMAVALSACPYAGDLALAK-GKAIHGC 172
Query: 298 -VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
V+KG Y+FV N+LIC+YGK G++ A+ F + KN V+WN LITSYA A LCD+
Sbjct: 173 GVVKGLMHGYLFVTNSLICMYGKLGEMDDAKKAFRDATAKNTVTWNTLITSYAAARLCDK 232
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
A++V +Q+E++ GG++ PNV+SWSAVIG FAS+G + AL+LFR+MQ + N VT++
Sbjct: 233 ALDVLAQMEQI-GGTVA-PNVVSWSAVIGGFASSGDTDRALELFRRMQQQWLSPNVVTMA 290
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
+LS C + AL +GRE+HGH ++ ++++ LV+NGL+NMY KCG + VF+ ++ +
Sbjct: 291 TVLSACVDLLALRLGRELHGHAMKAELDRHSLVENGLINMYAKCGKVSGARKVFDGMKTR 350
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
DLI+WNSM++GYGM+GL + ALA F +M A +PDGV FVAVLSAC HAG V EGRR+F
Sbjct: 351 DLISWNSMLAGYGMHGLCDEALALFTDMAGATVEPDGVTFVAVLSACGHAGRVTEGRRLF 410
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
D MVR +I P MEHY CMV LLGRAGLL++AS++V+ MP+ P+ VWG LLNSCR+H +
Sbjct: 411 DRMVRAHKISPSMEHYTCMVYLLGRAGLLRDASELVETMPVRPDLCVWGALLNSCRIHGD 470
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
+AEA + + ++TG++ML++N+YA G W+++ KVR+ K GL+K GQSWIE
Sbjct: 471 AAMAEATIANVLQSEDQSTGNHMLITNLYAMCGMWDESKKVRVMTKEAGLRKNPGQSWIE 530
Query: 657 VKRKIHMFSSGNSLQ--SDLKNVCEVLEELALQMENK 691
V K+ F++G++ + ++V +L++L +ME++
Sbjct: 531 VDNKVVAFAAGSAPPNLTGAEDVFGMLDDLYAEMEDE 567
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 201/400 (50%), Gaps = 42/400 (10%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP------------------- 90
VH + G +A +A ++L+ Y+R GR DAR VF+ P
Sbjct: 30 VHAHALHLGLHAQHDVAGQILAAYSRLGRAADARRVFDAMPPGRTTFHWNALISAYSSGC 89
Query: 91 --------------FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
+ ++ W ++L + +G + + L+L+ +M++ G G+ +
Sbjct: 90 DPDAARDAFARMAAAGARPDAVTWTALLSAHARSGKHADVLQLFGEMQRSGCEGNAESMA 149
Query: 137 LVIRACKFMGSFRFRFSFGQIVHN-HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
+ + AC + G + G+ +H V++ G + + N LI MY K+G+M D+ K F
Sbjct: 150 VALSACPYAGD--LALAKGKAIHGCGVVKGLMHGYLFVTNSLICMYGKLGEMDDAKKAFR 207
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG--LEPNFVTWTSLLSSHARCGRL 253
KN ++WN + + +A CD AL++ +ME G + PN V+W++++ A G
Sbjct: 208 DATAKNTVTWNTLITSYAAARLCDKALDVLAQMEQIGGTVAPNVVSWSAVIGGFASSGDT 267
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
+ ++LF M+++ + +A VLS C DL A +G+ +HG +K + + V+N L
Sbjct: 268 DRALELFRRMQQQWLSPNVVTMATVLSACVDLLALRLGRELHGHAMKAELDRHSLVENGL 327
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
I +Y K G V A+ +F ++ ++++SWN+++ Y GLCDEA+ +F+ + G+
Sbjct: 328 INMYAKCGKVSGARKVFDGMKTRDLISWNSMLAGYGMHGLCDEALALFTDM----AGATV 383
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
P+ +++ AV+ A GR E LF +M A ++ S+
Sbjct: 384 EPDGVTFVAVLSACGHAGRVTEGRRLFDRMVRAHKISPSM 423
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 25/272 (9%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
W++++ S+G + AL+L+ +M++ + + T V+ AC + + R G+ +H
Sbjct: 254 WSAVIGGFASSGDTDRALELFRRMQQQWLSPNVVTMATVLSACVDLLALR----LGRELH 309
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
H ++ + + N LI MYAK G++S + K+FD ++ ++ ISWN M +G+ ++ CD
Sbjct: 310 GHAMKAELDRHSLVENGLINMYAKCGKVSGARKVFDGMKTRDLISWNSMLAGYGMHGLCD 369
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVV 278
AL LF M +EP+ VT+ ++LS+ GR+ E LFD M+R I E +
Sbjct: 370 EALALFTDMAGATVEPDGVTFVAVLSACGHAGRVTEGRRLFDRMVRAHKISPSMEHYTCM 429
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK-------HGDVKVAQNLFS 331
+ + +G+ G + +CV+G HGD +A+ +
Sbjct: 430 VYL--------LGRA--GLLRDASELVETMPVRPDLCVWGALLNSCRIHGDAAMAEATIA 479
Query: 332 EI--EEKNIVSWNALITS-YAEAGLCDEAVEV 360
+ E + LIT+ YA G+ DE+ +V
Sbjct: 480 NVLQSEDQSTGNHMLITNLYAMCGMWDESKKV 511
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 22 SIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFD 81
+++T L C D L + +++H + + + + ++++YA+ G++
Sbjct: 285 NVVTMATVLSACVDLL-----ALRLGRELHGHAMKAELDRHSLVENGLINMYAKCGKVSG 339
Query: 82 ARNVFETAPFDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR 140
AR VF+ K+ L+ WNS+L +GL + AL L+ M V DG TF V+
Sbjct: 340 ARKVFD----GMKTRDLISWNSMLAGYGMHGLCDEALALFTDMAGATVEPDGVTFVAVLS 395
Query: 141 ACKFMGSF-RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV 199
AC G R F ++V H + + +V L+G + G + D+ +L + + V
Sbjct: 396 ACGHAGRVTEGRRLFDRMVRAHKISPSMEHYTCMVY-LLG---RAGLLRDASELVETMPV 451
Query: 200 K-NYISWNMMFSGFALNFD 217
+ + W + + ++ D
Sbjct: 452 RPDLCVWGALLNSCRIHGD 470
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/686 (33%), Positives = 392/686 (57%), Gaps = 50/686 (7%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLF 80
+T + ++ + +LQ+C+ ++ L+ QVH QL+V G + FL +R+L +Y + G +
Sbjct: 3 LTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVE 62
Query: 81 DARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR 140
DAR +F+ + + W +I+ + G YE +KL+ M GV D F FP V +
Sbjct: 63 DARRMFDKMS---ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFK 119
Query: 141 ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
AC + ++R G+ V++++L +GF+GN + ++ M+ K G+M + + F+++ K
Sbjct: 120 ACSELKNYRV----GKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK 175
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
+ WN+M SG+ G ++ +++F
Sbjct: 176 DVFMWNIMVSGYTSK-----------------------------------GEFKKALNVF 200
Query: 261 DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK-GGFEDYVFVKNALICVYGK 319
M G++ + IA +S C +L+ G+ IHG+ IK + + V N+L+ Y K
Sbjct: 201 RKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAK 260
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNAL--ITSYAEAGLCDEAVEVFSQLEKLDG--GSMERP 375
V+VA+ F I++ ++VSWNA+ +T + + G A+E F ++ +
Sbjct: 261 CRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTR 320
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH 435
+V+ W+++I A A +GR ALDL R+M L+ V N+VT+ L C++ AAL G+EIH
Sbjct: 321 DVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIH 380
Query: 436 GHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
++R ++ + N L++MY +CG +++ +F+ + ++DL++WN MIS YGM+G G
Sbjct: 381 QFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGM 440
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
+A+ F++ G KP+ + F +LSACSH+GL+ EG + F MM E+ ++P +E YACM
Sbjct: 441 DAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACM 500
Query: 556 VDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETT 615
VDLL RAG E + ++ MP EPNA VWG+LL +CR+H N D+AE A +F L +++
Sbjct: 501 VDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSS 560
Query: 616 GSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLK 675
G+Y+L++NIY+A+GRWEDAAK+R K +G+ K G SWIEVKRK+H F G++ ++
Sbjct: 561 GNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLME 620
Query: 676 NVCEVLEELALQMENKGCVPDNDIIL 701
+ +E L ++ G VPD + +L
Sbjct: 621 QISAKMESLYFDIKEIGYVPDTNFVL 646
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 237/690 (34%), Positives = 383/690 (55%), Gaps = 44/690 (6%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVL--SIYARFGRLFDARNVFETAPFDCKS 95
L C + Q ++ +Q+I+TG + F A+R+L S + F L + +F+ S
Sbjct: 48 LHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIE---NS 104
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ +WN+++R + + E AL LY M K V D +T+PLV++AC + R G
Sbjct: 105 NGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQAC----AVRLLEFGG 160
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ +H+HVL++GF +V++ N LI MYA G M D+ KLFD+ V + +SWN + +G+
Sbjct: 161 KEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKK 220
Query: 216 FDCDGALELFKRMELEGL---------------------------EPNFVTWTSLLSSHA 248
D + A +F +M + E + V+W++L+S +
Sbjct: 221 GDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYE 280
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ G EE + +F M G+ + + VLS CA L+ GK+IHG VI+ G E YV
Sbjct: 281 QNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVN 340
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
++NALI +Y G++ AQ LF+ + +SWN++I+ + G ++A +F
Sbjct: 341 LQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFD------ 394
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
M +++SWSAVI +A + E L LF +MQL ++ + + ++S C AAL
Sbjct: 395 --VMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAAL 452
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+ G+ +H ++ + + N+++ LL+MYMKCGC+E VF +E+K + +WN++I G
Sbjct: 453 DQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGL 512
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
+NGL E +L F EM G P+ + F+ VL AC H GLV+EGR F M+ + IEP
Sbjct: 513 AVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPN 572
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
++HY CMVDLLGRAGLL EA ++++MPM P+ WG LL +C+ H +T++ E + ++
Sbjct: 573 VKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLI 632
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L + G ++LLSNI+A+ G WED +VR K +G+ K G S IE +H F +G+
Sbjct: 633 ELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGD 692
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVPDND 698
+ V +L E+A +++ +G PD +
Sbjct: 693 KTHPWINKVEGMLNEMAKRLKMEGYAPDTN 722
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 235/698 (33%), Positives = 388/698 (55%), Gaps = 61/698 (8%)
Query: 11 QFSP-SNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARV 69
F P S+P P+ ++ + SL LL CK+ LKQ+H+Q+I TG + + F +++
Sbjct: 18 HFQPTSDP--PYKLLQNHPSLT-----LLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKL 70
Query: 70 LSIYA--RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG 127
+ A FG L A +FE+ + + +WN+++R N + A+ YV+M G
Sbjct: 71 IEFCAISPFGNLSYALLLFESIE---QPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCG 127
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
V + +TFP ++++C +G+ + G+ +H HVL++G + + + LI MYA+ G++
Sbjct: 128 VEPNSYTFPFLLKSCAKVGATQE----GKQIHGHVLKLGLESDPFVHTSLINMYAQNGEL 183
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
+ +F K +++ +S+ + +G+ L D A LF+ + + + V+W ++++ +
Sbjct: 184 GYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVR----DAVSWNAMIAGY 239
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
A+ GR EE + F M++ + + VLS CA + +G + ++ G +
Sbjct: 240 AQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNL 299
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
+ NALI +Y K GD+ A++LF G+C++
Sbjct: 300 RLVNALIDMYSKCGDLDKARDLFE--------------------GICEK----------- 328
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
++ISW+ +IG ++ +EAL LFRKMQ + V N VT +L CA A
Sbjct: 329 --------DIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGA 380
Query: 428 LNIGREIHGHVVRVSMN-KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
L++G+ IH ++ + + N + L++MY KCG +E VF ++ K L +WN+MIS
Sbjct: 381 LDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMIS 440
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
G M+G AL F +M + GF+PD + FV VLSACSHAGLV GR+ F MV ++ I
Sbjct: 441 GLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDIS 500
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
P+++HY CM+DLLGRAGL EA ++KNM M+P+ +WG+LL +CR+H N ++ E A
Sbjct: 501 PKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKH 560
Query: 607 IFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSS 666
+F L E G+Y+LLSNIYA +GRW+D A++R KG+KKV G S IEV +H F
Sbjct: 561 LFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLV 620
Query: 667 GNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G+ + +++ ++L+E+ +E G VPD +L++M
Sbjct: 621 GDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDM 658
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 227/687 (33%), Positives = 376/687 (54%), Gaps = 38/687 (5%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
++H LI G + +L +++ Y R L A VF P +LLWN + +N+
Sbjct: 154 EIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMP---NPEALLWNEAIILNL 210
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+ + ++L+ KM+ + + T V++AC MG+ + + +H +V + G
Sbjct: 211 QSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGAL----NAAKQIHGYVFRFGLD 266
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+V + N LI MY+K G++ + ++FD + +N SWN M S +A + A LF +
Sbjct: 267 SDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYEL 326
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E ++P+ VTW LLS H G EE +++ M+ G + + ++ VL ++L
Sbjct: 327 ESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFL 386
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+MGK HG+V++ GF+ V+V +LI +Y K+ + AQ +F ++ +NI +WN+L++ Y
Sbjct: 387 NMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGY 446
Query: 349 AEAGLCDEAVEVFSQLEK-------------LDGGSME------------------RPNV 377
+ G+ ++A+ + +Q+EK + G +M PNV
Sbjct: 447 SFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNV 506
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
+SW+A+I + G ++L F +MQ V+ NS +I+ LL CA + L G+EIH
Sbjct: 507 VSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCL 566
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
+R +++ V L++MY K L+ H VF +I+ K L +WN MI G+ + GLG+ A
Sbjct: 567 SIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEA 626
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
++ F EM + G PD + F A+LSAC ++GL+ EG + FD M+ ++RI P++EHY CMVD
Sbjct: 627 ISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVD 686
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
LLGRAG L EA D++ MP++P+A +WG LL SCR+HKN AE A +F L + +
Sbjct: 687 LLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSAN 746
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
Y+L+ N+Y+ RWED +R G++ SWI++ +++H+FSS D +
Sbjct: 747 YILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKI 806
Query: 678 CEVLEELALQMENKGCVPDNDIILWEM 704
L +L +M+ G VPD + + M
Sbjct: 807 YFELYQLVSEMKKLGYVPDVNCVYQNM 833
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/554 (24%), Positives = 260/554 (46%), Gaps = 52/554 (9%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAAR-VLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
++ +K +H Q+I + AA+ ++S Y FG + A VF + L WN
Sbjct: 45 SLTSVKMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVG---LPRNYLKWN 101
Query: 102 SILR-VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
S + S G L+++ ++ GV+ D + + ++ C + G +H
Sbjct: 102 SFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRV----MDIWLGMEIHG 157
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
+++ GF +V++ L+ Y + W + +
Sbjct: 158 CLIKRGFDLDVYLRCALMNFYGR--------------------CWGL-----------EK 186
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
A ++F M P + W + + + +L++ ++LF M+ ++ I VL
Sbjct: 187 ANQVFHEMP----NPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQ 242
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
C + A + K IHG+V + G + V + N LI +Y K+G +++A+ +F +E +N S
Sbjct: 243 ACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSS 302
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
WN++I+SYA G ++A +F +LE D +P++++W+ ++ +G EE L++
Sbjct: 303 WNSMISSYAALGFLNDAWSLFYELESSD----MKPDIVTWNCLLSGHFLHGYKEEVLNIL 358
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
++MQ NS +++ +L +E LN+G+E HG+V+R + ++ V L++MY+K
Sbjct: 359 QRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKN 418
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
L VF+ ++ +++ WNS++SGY G+ E+AL +M + G KPD V + ++
Sbjct: 419 HSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMI 478
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME-- 578
S + G E + + + P + + ++ +AG +++ M E
Sbjct: 479 SGYAMWGCGKEALAVLH-QTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGV 537
Query: 579 -PNAYVWGTLLNSC 591
PN+ LL +C
Sbjct: 538 MPNSASITCLLRAC 551
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 197/437 (45%), Gaps = 78/437 (17%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF------- 86
+LQ C + L KQ+H + G ++ L ++S+Y++ G+L AR VF
Sbjct: 240 VLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRN 299
Query: 87 -------------------------ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYV 121
E D K + WN +L + +G E L +
Sbjct: 300 TSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQ 359
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
+M+ G + + V++A +G + G+ H +VL+ GF +V++ LI MY
Sbjct: 360 RMQGEGFKPNSSSMTSVLQAISELGF----LNMGKETHGYVLRNGFDCDVYVGTSLIDMY 415
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELE---------- 231
K ++ + +FD ++ +N +WN + SG++ + AL L +ME E
Sbjct: 416 VKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWN 475
Query: 232 -------------------------GLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
GL PN V+WT+L+S ++ G +++ F M++
Sbjct: 476 GMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQE 535
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
G+ + +I +L CA L+ GK IH I+ GF + VFV ALI +Y K +K A
Sbjct: 536 GVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNA 595
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+F I+ K + SWN +I +A GL EA+ VF++++K+ G P+ I+++A++ A
Sbjct: 596 HKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVG----PDAITFTALLSA 651
Query: 387 FASNGRGEEALDLFRKM 403
++G E F M
Sbjct: 652 CKNSGLIGEGWKYFDSM 668
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 27 NNSLLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
N++ + C LL+ C ++ L K++H I G F+A ++ +Y++ L +A
Sbjct: 540 NSASITC---LLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAH 596
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
VF +S WN ++ GL + A+ ++ +M+K+GV D TF ++ ACK
Sbjct: 597 KVFRRIQNKTLAS---WNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACK 653
Query: 144 FMG 146
G
Sbjct: 654 NSG 656
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/656 (33%), Positives = 371/656 (56%), Gaps = 11/656 (1%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
Q H +++ +GA +++A++++ Y+ + DA + ++ P + ++S++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIP---DPTVYSFSSLIYALT 92
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
L+ ++ ++ +M G++ D P + + C + +F+ G+ +H G
Sbjct: 93 KAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKA----GKQIHCVACVSGLD 148
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+ + L MY + G+M D+ K+FD++ K+ ++ + + G+A + + + M
Sbjct: 149 MDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEM 208
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E G+EPN V+W +LS R G +E + +F M G ++ VL D
Sbjct: 209 EKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENL 268
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+MG+ IHG+VIK G V +A++ +YGK G V LF E E NA IT
Sbjct: 269 NMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGL 328
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+ GL D+A+E+F ++ ME NV+SW+++I A NG+ EAL+LFR+MQ+A V
Sbjct: 329 SRNGLVDKALEMFGLFKE---QKMEL-NVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
N VTI +L C AAL GR HG VRV + ++ V + L++MY KCG ++ +
Sbjct: 385 KPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQI 444
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
VF + K+L+ WNS+++GY M+G + ++ FE ++ KPD ++F ++LSAC GL
Sbjct: 445 VFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGL 504
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+EG + F+MM E+ I+P++EHY+CMV+LLGRAG LQEA D++K +P EP++ VWG LL
Sbjct: 505 TDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALL 564
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
NSCR+ N D+AE A ++F L E G+Y+L+SNIYAA G W + +R ++ GLKK
Sbjct: 565 NSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKK 624
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G SWI+VK K++ + + + + E ++E++ +M G P+ D L ++
Sbjct: 625 NPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDV 680
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/712 (33%), Positives = 392/712 (55%), Gaps = 47/712 (6%)
Query: 18 SRPFSIITYN---NSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVL--SI 72
S+PF I T+ L + LQ+C+ I Q Q+ +Q+I++G +F A+R+L S
Sbjct: 10 SKPFKIPTFTLKPTLTLPILETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFST 69
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
F + + +F + + N++++ + A+ +Y M + V D
Sbjct: 70 ELPFININQSYQIFSHIE---NPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADN 126
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
+T+P++ ++C S R G+ + +HVL++GF +V+I N LI MYA G +SD+ K
Sbjct: 127 YTYPILFQSC----SIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARK 182
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL------------------- 233
+FD V + +SWN M +G+ L + + A +++ RM +
Sbjct: 183 VFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEA 242
Query: 234 --------EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
+ + V+W++L+S + + EE + LF M GI V + VLS C+ L
Sbjct: 243 CKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRL 302
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
GK++HG V+K G E YV ++NALI +Y +V AQ LFSE + +SWN++I
Sbjct: 303 LVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMI 362
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+ Y + G ++A +F SM + +SWSA+I +A R E L LF++MQ+
Sbjct: 363 SGYVKCGEIEKARALFD--------SMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQI 414
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
+ + ++S C AAL+ G+ IH ++ + + NI++ L+NMYMK GC+E+
Sbjct: 415 EGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVED 474
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
VF+ +E+K + TWN++I G MNGL + +L TF EM E G P+ + FVAVL AC H
Sbjct: 475 ALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRH 534
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
GLV+EG R F+ M++E +I P ++HY CMVDLLGRAG+L+EA +++++MPM P+ WG
Sbjct: 535 MGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWG 594
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
LL +C+ + + + E + ++ L + G +LLSNIYA+ G W D +VR + G
Sbjct: 595 ALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHG 654
Query: 646 LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
+ K G S IE ++H F +G+ +++ +L+E+A +++ +G PD
Sbjct: 655 VVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDT 706
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/656 (33%), Positives = 371/656 (56%), Gaps = 11/656 (1%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
Q H +++ +GA +++A++++ Y+ + DA V ++ P + ++S++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIP---DPTIYSFSSLIYALT 92
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
L+ ++ ++ +M G++ D P + + C + +F+ G+ +H G
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKV----GKQIHCVSCVSGLD 148
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+ + + MY + G+M D+ K+FD++ K+ ++ + + +A + + + M
Sbjct: 149 MDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM 208
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E G+E N V+W +LS R G +E + +F + G ++ VL D
Sbjct: 209 ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML 268
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+MG++IHG+VIK G V +A+I +YGK G V +LF++ E NA IT
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+ GL D+A+E+F E +ME NV+SW+++I A NG+ EAL+LFR+MQ+A V
Sbjct: 329 SRNGLVDKALEMF---ELFKEQTMEL-NVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
N VTI +L C AAL GR HG VRV + N+ V + L++MY KCG + +
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
VF + K+L+ WNS+++G+ M+G + ++ FE ++ KPD ++F ++LSAC GL
Sbjct: 445 VFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGL 504
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+EG + F MM E+ I+P++EHY+CMV+LLGRAG LQEA D++K MP EP++ VWG LL
Sbjct: 505 TDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
NSCR+ N D+AE A ++F L E G+Y+LLSNIYAA G W + +R ++ GLKK
Sbjct: 565 NSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKK 624
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G SWI+VK +++ +G+ + + E ++E++ +M G P+ D L ++
Sbjct: 625 NPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDV 680
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/653 (34%), Positives = 369/653 (56%), Gaps = 11/653 (1%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
Q H +++ +GA +++A++++ Y+ + DA V ++ P + ++S++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIP---DPTIYSFSSLIYALT 92
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
L+ ++ ++ +M G++ D P + + C + +F+ G+ +H G
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKV----GKQIHCVSCVSGLD 148
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+ + + MY + G+M D+ K+FD++ K+ ++ + + +A + + + M
Sbjct: 149 MDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM 208
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E G+E N V+W +LS R G +E + +F + G ++ VL D
Sbjct: 209 ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML 268
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+MG++IHG+VIK G V +A+I +YGK G V +LF++ E NA IT
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+ GL D+A+E+F E +ME NV+SW+++I A NG+ EAL+LFR+MQ+A V
Sbjct: 329 SRNGLVDKALEMF---ELFKEQTMEL-NVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
N VTI +L C AAL GR HG VRV + N+ V + L++MY KCG + +
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
VF + K+L+ WNS+++G+ M+G + ++ FE ++ KPD ++F ++LSAC GL
Sbjct: 445 VFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGL 504
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+EG + F MM E+ I+P++EHY+CMV+LLGRAG LQEA D++K MP EP++ VWG LL
Sbjct: 505 TDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
NSCR+ N D+AE A ++F L E G+Y+LLSNIYAA G W + +R ++ GLKK
Sbjct: 565 NSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKK 624
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
G SWI+VK +++ +G+ + + E ++E++ +M G P+ D L
Sbjct: 625 NPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFAL 677
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 225/641 (35%), Positives = 361/641 (56%), Gaps = 71/641 (11%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAF-LAARVLSIYARFGRLFDARNVFETA 89
+D LLQ C K++ K +H +I T L +++SIY + G L +AR VF+
Sbjct: 67 YDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEM 126
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC---KFMG 146
P + + W +++ + + AL + +M+ +G+ + FTF ++ AC + +G
Sbjct: 127 PV---KNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLG 183
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
F H+ +++ GF+ NV + N L+ MYAK G + + +LFDK+ ++ +SWN
Sbjct: 184 EF----------HDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWN 233
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
M +G+ N + AL+LF+ + + + +TW ++++ +A+CG +E ++LF+ M
Sbjct: 234 AMIAGYVQNGLIEDALKLFQEIP----KRDVITWNTMMAGYAQCGDVENAVELFEKMP-- 287
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
E + N +I Y ++G VK A
Sbjct: 288 -------------------------------------EQNLVSWNTMIAGYVQNGSVKEA 310
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
LF + E+N++SWNA+I+ +A+ G +EA+++F +M NV+SW+A+I
Sbjct: 311 FKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFK--------TMPECNVVSWNAMIAG 362
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
++ NG+ E AL LF +MQ+ + N+ T + +L CA A L G E H V+R +
Sbjct: 363 YSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSD 422
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+LV N L+ MY KCG +E+ VF+++ ++D + ++MI GY +NG + +L FE+M
Sbjct: 423 VLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQF 482
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
G KPD V FV VLSAC HAGLV+EGR+ FD+M R + I P MEHY CM+DLLGRAG
Sbjct: 483 TGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFD 542
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
EA+D++ MP++P+A +WG+LL++CR H N D+ E +A + L + Y+LLSNIYA
Sbjct: 543 EANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYA 602
Query: 627 ASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG 667
A+GRW+D VR K + +KK G SWI +K+++H F G
Sbjct: 603 AAGRWDDIGSVRNRMKDRKVKKKLGCSWIVIKKQVHAFLVG 643
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 106/214 (49%), Gaps = 9/214 (4%)
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
++ + GR EAL + + M + +S T LL C + +L + +H H+++
Sbjct: 33 DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92
Query: 441 VSMN-KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
++I + N L+++Y+K G L E VF+++ K++++W +MI+ Y + G+ AL
Sbjct: 93 TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALG 152
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
F EM + G +P+ F ++L AC+ ++ E F + + E + +VD+
Sbjct: 153 FFYEMQDVGIQPNHFTFASILPACTDLEVLGE----FHDEIVKGGFESNVFVGNGLVDMY 208
Query: 560 GRAGLLQEASDIVKNMPMEP----NAYVWGTLLN 589
+ G ++ A ++ MP NA + G + N
Sbjct: 209 AKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQN 242
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 232/674 (34%), Positives = 370/674 (54%), Gaps = 13/674 (1%)
Query: 36 HLLQQC-----KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
H L QC ++ Q +Q H ++ + L +LS YA L + +
Sbjct: 3 HALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSS 62
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ ++S++ + + + L + + L ++ D F P I++C S R
Sbjct: 63 HLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSC---ASLR- 118
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
GQ +H GF + + + L MY K ++ D+ KLFD++ ++ + W+ M +
Sbjct: 119 ALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIA 178
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
G++ + A ELF M G+EPN V+W +L+ G +E + +F MM +G
Sbjct: 179 GYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWP 238
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
++ VL L +G +HG+VIK G FV +A++ +YGK G VK +F
Sbjct: 239 DGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVF 298
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
E+EE I S NA +T + G+ D A+EVF+ K ME NV++W+++I + + N
Sbjct: 299 DEVEEMEIGSLNAFLTGLSRNGMVDTALEVFN---KFKDQKMEL-NVVTWTSIIASCSQN 354
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
G+ EAL+LFR MQ V N+VTI L+ C +AL G+EIH +R + ++ V
Sbjct: 355 GKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVG 414
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
+ L++MY KCG ++ F+++ +L++WN+++ GY M+G + + F M+++G K
Sbjct: 415 SALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQK 474
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
PD V F VLSAC+ GL EG R ++ M E IEP+MEHYAC+V LL R G L+EA
Sbjct: 475 PDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYS 534
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
I+K MP EP+A VWG LL+SCR+H N + E A ++F L G+Y+LLSNIYA+ G
Sbjct: 535 IIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGL 594
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
W++ ++R K+KGL+K G SWIEV K+HM +G+ +K++ E L++L +QM+
Sbjct: 595 WDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQMKK 654
Query: 691 KGCVPDNDIILWEM 704
G +P + +L ++
Sbjct: 655 SGYLPKTNFVLQDV 668
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/681 (34%), Positives = 377/681 (55%), Gaps = 16/681 (2%)
Query: 29 SLLDCFDHLLQQC-----KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
+LLD H + C ++ Q +Q H ++ TG LA ++LS YA DA
Sbjct: 9 ALLDSVQHTILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADAT 68
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
V + P + + +++++ + +AL + +M G++ D P ++AC
Sbjct: 69 LVLDLVP---EPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACA 125
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
+ + + + VH GF + + + L+ MY K Q+ D+ ++FD++ + +
Sbjct: 126 GLSALKP----ARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVV 181
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
SW+ + + +A D A LF M G++PN ++W +++ G E + +F M
Sbjct: 182 SWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM 241
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
RG E I+ VL DL MG +IHG+VIK G V +ALI +YGK
Sbjct: 242 HLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCT 301
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
+F +++ ++ S NA I + G + ++ +F QL+ D G ME NV+SW+++
Sbjct: 302 SEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLK--DQG-MEL-NVVSWTSM 357
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
I + NGR EAL+LFR+MQ+A V NSVTI LL C AAL G+ H +R +
Sbjct: 358 IACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGI 417
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
+ ++ V + L++MY KCG ++ + F+ I K+L+ WN++I+GY M+G + A+ F+
Sbjct: 418 STDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDL 477
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M +G KPD ++F VLSACS +GL EG F+ M ++ IE ++EHYACMV LL RAG
Sbjct: 478 MQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAG 537
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
L++A +++ MP+ P+A VWG LL+SCR+H N + E A ++F L G+Y+LLSN
Sbjct: 538 KLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSN 597
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
IYA+ G W + +VR K KGL+K G SWIEVK K+HM +G+ + + E L++
Sbjct: 598 IYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIENLDK 657
Query: 684 LALQMENKGCVPDNDIILWEM 704
L+++M+ G P+ + +L ++
Sbjct: 658 LSMEMKKLGYFPEINFVLQDV 678
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/681 (34%), Positives = 377/681 (55%), Gaps = 16/681 (2%)
Query: 29 SLLDCFDHLLQQC-----KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
+LLD H + C ++ Q +Q H ++ TG LA ++LS YA DA
Sbjct: 9 ALLDSVQHTIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADAT 68
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
V + P + + +++++ + +AL + +M G++ D P ++AC
Sbjct: 69 LVLDLVP---EPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACA 125
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
+ + + + VH GF + + + L+ MY K Q+ D+ ++FD++ + +
Sbjct: 126 GLSALKP----ARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVV 181
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
SW+ + + +A D A LF M G++PN ++W +++ G E + +F M
Sbjct: 182 SWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM 241
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
RG E I+ VL DL MG +IHG+VIK G V +ALI +YGK
Sbjct: 242 HLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCT 301
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
+F +++ ++ S NA I + G + ++ +F QL+ D G ME NV+SW+++
Sbjct: 302 SEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLK--DQG-MEL-NVVSWTSM 357
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
I + NGR EAL+LFR+MQ+A V NSVTI LL C AAL G+ H +R +
Sbjct: 358 IACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGI 417
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
+ ++ V + L++MY KCG ++ + F+ I K+L+ WN++I+GY M+G + A+ F+
Sbjct: 418 STDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDL 477
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M +G KPD ++F VLSACS +GL EG F+ M ++ IE ++EHYACMV LL RAG
Sbjct: 478 MQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAG 537
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
L++A +++ MP+ P+A VWG LL+SCR+H N + E A ++F L G+Y+LLSN
Sbjct: 538 KLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSN 597
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
IYA+ G W + +VR K KGL+K G SWIEVK K+HM +G+ + + E L++
Sbjct: 598 IYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDK 657
Query: 684 LALQMENKGCVPDNDIILWEM 704
L+++M+ G P+ + +L ++
Sbjct: 658 LSMEMKKLGYFPEINFVLQDV 678
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/656 (33%), Positives = 369/656 (56%), Gaps = 22/656 (3%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
++H LI G + +L +++ Y R L A VF P +LLWN + +N+
Sbjct: 695 EIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMP---NPEALLWNEAIILNL 751
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+ + ++L+ KM+ + + T V++AC MG+ + + +H +V + G
Sbjct: 752 QSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGAL----NAAKQIHGYVFRFGLD 807
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+V + N LI MY+K G++ + ++FD + +N SWN M S +A + A LF +
Sbjct: 808 SDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYEL 867
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E ++P+ VTW LLS H G EE +++ M+ G + + ++ VL ++L
Sbjct: 868 ESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFL 927
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+MGK HG+V++ GF+ V+V +LI +Y K+ + AQ +F ++ +NI +WN+L++ Y
Sbjct: 928 NMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGY 987
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+ G+ ++A+ + +Q+EK +G +P++++W+ +I +A G +A
Sbjct: 988 SFKGMFEDALRLLNQMEK-EGI---KPDLVTWNGMISGYAMWGCARKAF----------- 1032
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+ NS +I+ LL CA + L G+EIH +R +++ V L++MY K L+ H
Sbjct: 1033 MPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHK 1092
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
VF +I+ K L +WN MI G+ + GLG+ A++ F EM + G PD + F A+LSAC ++GL
Sbjct: 1093 VFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGL 1152
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ EG + FD M+ ++RI P++EHY CMVDLLGRAG L EA D++ MP++P+A +WG LL
Sbjct: 1153 IGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALL 1212
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
SCR+HKN AE A +F L + +Y+L+ N+Y+ RWED +R G++
Sbjct: 1213 GSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRN 1272
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
SWI++ +++H+FSS D + L +L +M+ G VPD + + M
Sbjct: 1273 RQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNM 1328
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/535 (23%), Positives = 248/535 (46%), Gaps = 72/535 (13%)
Query: 66 AARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR-VNVSNGLYENALKLYVKMR 124
A ++S Y FG + A VF + L WNS + S G L+++ ++
Sbjct: 610 AKNLISSYLGFGDFWSAAMVFYVG---LPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELH 666
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
GV+ D + + ++ C + G +H +++ GF +V++ L+ Y +
Sbjct: 667 GKGVVFDSEVYSVALKTCTRV----MDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGR- 721
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
W + + A ++F M P + W +
Sbjct: 722 -------------------CWGL-----------EKANQVFHEMP----NPEALLWNEAI 747
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
+ + +L++ ++LF M+ ++ I VL C + A + K IHG+V + G +
Sbjct: 748 ILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLD 807
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
V + N LI +Y K+G +++A+ +F +E +N SWN++I+SYA G ++A +F +L
Sbjct: 808 SDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYEL 867
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
E D +P++++W+ ++ +G EE L++ ++MQ NS +++ +L +E
Sbjct: 868 ESSD----MKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISE 923
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
LN+G+E HG+V+R + ++ V L++MY+K L VF+ ++ +++ WNS+
Sbjct: 924 LGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSL 983
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAF------------------------VAVL 520
+SGY G+ E+AL +M + G KPD V + +L
Sbjct: 984 VSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLL 1043
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
AC+ L+ +G+ I + +R IE A ++D+ ++ L+ A + + +
Sbjct: 1044 RACASLSLLQKGKEIHCLSIRNGFIEDVFVATA-LIDMYSKSSSLKNAHKVFRRI 1097
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 188/402 (46%), Gaps = 54/402 (13%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF------- 86
+LQ C + L KQ+H + G ++ L ++S+Y++ G+L AR VF
Sbjct: 781 VLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRN 840
Query: 87 -------------------------ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYV 121
E D K + WN +L + +G E L +
Sbjct: 841 TSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQ 900
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
+M+ G + + V++A +G + G+ H +VL+ GF +V++ LI MY
Sbjct: 901 RMQGEGFKPNSSSMTSVLQAISELGF----LNMGKETHGYVLRNGFDCDVYVGTSLIDMY 956
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
K + + +FD ++ +N +WN + SG++ + AL L +ME EG++P+ VTW
Sbjct: 957 VKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWN 1016
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
++S +A G ++ + +I +L CA L+ GK IH I+
Sbjct: 1017 GMISGYAMWG-----------CARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRN 1065
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
GF + VFV ALI +Y K +K A +F I+ K + SWN +I +A GL EA+ VF
Sbjct: 1066 GFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVF 1125
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
++++K+ G P+ I+++A++ A ++G E F M
Sbjct: 1126 NEMQKVGVG----PDAITFTALLSACKNSGLIGEGWKYFDSM 1163
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 192/422 (45%), Gaps = 51/422 (12%)
Query: 232 GLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
GL N++ W S + + G L +++F + +G+ +E +V L C + +
Sbjct: 633 GLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWL 692
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
G IHG +IK GF+ V+++ AL+ YG+ ++ A +F E+ + WN
Sbjct: 693 GMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWN-------- 744
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
EA+ + Q EKL G ++LFRKMQ + + A
Sbjct: 745 -----EAIILNLQSEKLQKG--------------------------VELFRKMQFSFLKA 773
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
+ TI +L C + ALN ++IHG+V R ++ ++ + N L++MY K G LE VF
Sbjct: 774 ETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVF 833
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
+ +E ++ +WNSMIS Y G +A + F E+ + KPD V + +LS G
Sbjct: 834 DSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKE 893
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL---QEASDIVKNMPMEPNAYVWGTL 587
E I M E +P ++ + G L +E V + + YV +L
Sbjct: 894 EVLNILQRMQGE-GFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSL 952
Query: 588 LNSCRMH-KNTDVAEAMASQIF-GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
++ M+ KN + A A +F + ++ L + Y+ G +EDA ++ + +G
Sbjct: 953 ID---MYVKNHSLXSAQA--VFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEG 1007
Query: 646 LK 647
+K
Sbjct: 1008 IK 1009
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 27 NNSLLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
N++ + C LL+ C ++ L K++H I G F+A ++ +Y++ L +A
Sbjct: 1035 NSASITC---LLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAH 1091
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
VF +S WN ++ GL + A+ ++ +M+K+GV D TF ++ ACK
Sbjct: 1092 KVFRRIQNKTLAS---WNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACK 1148
Query: 144 FMG 146
G
Sbjct: 1149 NSG 1151
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 232/696 (33%), Positives = 381/696 (54%), Gaps = 62/696 (8%)
Query: 15 SNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA 74
S+PS P+ ++ + SL LL CKT+ LKQ+H+Q+I TG + + F ++++ A
Sbjct: 17 SDPSPPYKLVHDHPSLT-----LLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCA 71
Query: 75 --RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
G L A ++F+T + ++WN ++R S+ AL+ YV M G +
Sbjct: 72 VSPHGDLSYALSLFKTIR---NPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNE 128
Query: 133 FTFPLVIRAC-KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
+TFP + ++C K G+ G+ VH HVL++G + N + LI MYA+ G++ ++
Sbjct: 129 YTFPSIFKSCTKIRGAHE-----GKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNAR 183
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
+FDK +++ +S+ + +G+A D A ELF + + + V+W +++S +A+ G
Sbjct: 184 LVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVR----DVVSWNAMISGYAQSG 239
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD-HMGKVIHGFVIKGGFEDYVFVK 310
R+EE M F+ MR+ + + VLS CA + +G + ++ G + +
Sbjct: 240 RVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLV 299
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
N LI +Y K GD+ +EA +F +++
Sbjct: 300 NGLIDMYVKCGDL-------------------------------EEASNLFEKIQD---- 324
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
NV+SW+ +IG + +EAL LFR+M + + N VT +L CA AL++
Sbjct: 325 ----KNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDL 380
Query: 431 GREIHGHVVR--VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
G+ +H +V + SM + + L++MY KCG L +F+ + K L TWN+MISG+
Sbjct: 381 GKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGF 440
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
M+G + AL F M GF PD + FV VL+AC HAGL++ GRR F M++++++ P+
Sbjct: 441 AMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPK 500
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
+ HY CM+DL GRAGL EA +VKNM M+P+ +W +LL +CR+H+ ++AE++A +F
Sbjct: 501 LPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLF 560
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L E +Y+LLSNIYA +GRWED AK+R +KKV G S IEV +H F G+
Sbjct: 561 ELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGD 620
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ + ++L+E+ +++E G VPD +L++M
Sbjct: 621 KVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDM 656
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 227/701 (32%), Positives = 394/701 (56%), Gaps = 46/701 (6%)
Query: 62 SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYV 121
+ F +LS YA+ G+L A VF+ P S+ W +I+ G +E+A+K++V
Sbjct: 40 TTFSWNTILSGYAKQGKLEKAHQVFDLIPV---RDSVSWTTIIVGYNQMGRFEDAIKIFV 96
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
M K VL FT V+ +C GS G+ VH+ V+++G V + N L+ MY
Sbjct: 97 DMVKDKVLPTQFTLTNVLASCAATGSR----GIGKKVHSFVVKLGLHACVPVANSLLNMY 152
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC---DGALELFKRMELEGLEPNFV 238
AK G + + +FD+++++N SWN M S L+ +C D AL F+ + E + V
Sbjct: 153 AKTGDLKMAKVVFDRMKLRNTSSWNAMIS---LHMNCGRVDLALAQFELLS----ERDIV 205
Query: 239 TWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
+W S+++ + G E + F +++ ++ ++A LS CA+L GK IHG+
Sbjct: 206 SWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGY 265
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE--IEEKNIVSWNALITSYAEAGLCD 355
+++ F+ V NALI +Y K G V++A+ + + I + +++++ AL+ Y + G
Sbjct: 266 IVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDIT 325
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
A ++F+ S++ P+V++W+A+I + NG +A+++F+ M NS T+
Sbjct: 326 PARQIFN--------SLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTL 377
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI-E 474
+ +LS + +LN G++IH +R + V N L MY K G + VF + +
Sbjct: 378 AAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQ 437
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
+D ++W SMI +GLGE A+ FE+M+ G KPD + +V VLSAC+H GLV +GR
Sbjct: 438 NRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRS 497
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
FD+M +I+P + HYACMVDL GRAGLLQEA V+NMPMEP+ WG+LL+SC+++
Sbjct: 498 YFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVY 557
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
KN D+A+ A ++ + +G+Y L+N+Y++ G+W+DAAK+R K +G+KK G SW
Sbjct: 558 KNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSW 617
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQ 714
++++ K H+F + L + ++++++ +++ G PD + +L ++
Sbjct: 618 VQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDL---------- 667
Query: 715 RIRADNIKSKHRIVGFRNLKLGLR--LLLSLRSTNGQLMKN 753
++ K +I+ + + KL + ++ + +T ++MKN
Sbjct: 668 -----EVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKN 703
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 146/580 (25%), Positives = 272/580 (46%), Gaps = 72/580 (12%)
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
++++G +V+++N L+ +YAK G D+ LF+++ VK SWN + SG+A + A
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
++F + + + V+WT+++ + + GR E+ + +F M K + + VL+
Sbjct: 61 HQVFDLIPVR----DSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLAS 116
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
CA + +GK +H FV+K G V V N+L+ +Y K GD+K+A+ +F ++ +N SW
Sbjct: 117 CAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSW 176
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
NA+I+ + G D A+ F L + D ++SW+++I +G EAL F
Sbjct: 177 NAMISLHMNCGRVDLALAQFELLSERD--------IVSWNSMIAGCNQHGFDNEALQFFS 228
Query: 402 K-MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR-------------------- 440
++ + + +++ LS CA L+ G++IHG++VR
Sbjct: 229 SILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKS 288
Query: 441 --VSMNKNILVQNG-----------LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
V + + I+ Q+G LLN Y+K G + +F ++ D++ W +MI G
Sbjct: 289 GGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVG 348
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR-IE 546
Y NGL +A+ F+ M+ G +P+ A+LSA S +N G++I +R +
Sbjct: 349 YVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALS 408
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
P + + + + +AG + A + + + W +++ + H + A + Q
Sbjct: 409 PSVGN--ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQ 466
Query: 607 IFGL-ITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFS 665
+ L I +Y+ + +SA T G G+S+ ++ + +H
Sbjct: 467 MLTLGIKPDHITYVGV-----------------LSACTHGGLVEQGRSYFDLMKNVHKID 509
Query: 666 ---SGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILW 702
S + DL +L+E +EN P D+I W
Sbjct: 510 PTLSHYACMVDLFGRAGLLQEAYKFVENMPMEP--DVIAW 547
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 172/385 (44%), Gaps = 56/385 (14%)
Query: 38 LQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET---APF 91
L C + +L KQ+H ++ T +AS + ++S+YA+ G + AR + E +
Sbjct: 247 LSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDL 306
Query: 92 DCKSSSLL---------------------------WNSILRVNVSNGLYENALKLYVKMR 124
D + + L W +++ V NGL +A++++ M
Sbjct: 307 DVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMV 366
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
G + FT ++ A + S + G+ +H ++ G + + N L MYAK
Sbjct: 367 SEGPRPNSFTLAAMLSASSSVTS----LNHGKQIHASAIRSGEALSPSVGNALTTMYAKA 422
Query: 185 GQMSDSFKLFDKVRV-KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
G ++ + K+F+ +R ++ +SW M A + + A+ELF++M G++P+ +T+ +
Sbjct: 423 GSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGV 482
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV-----IHGFV 298
LS+ G +E+ FD+M+ I LS A + D G+ + FV
Sbjct: 483 LSACTHGGLVEQGRSYFDLMKN------VHKIDPTLSHYACM-VDLFGRAGLLQEAYKFV 535
Query: 299 IKGGFEDYVFVKNALI--CVYGKHGDV-KVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
E V +L+ C K+ D+ KVA IE N +++AL Y+ G D
Sbjct: 536 ENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWD 595
Query: 356 EAVEVFSQLEKLDGGSMERPNVISW 380
+A ++ +L K G +++ +SW
Sbjct: 596 DAAKI-RKLMKARG--VKKEQGLSW 617
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/683 (32%), Positives = 378/683 (55%), Gaps = 55/683 (8%)
Query: 28 NSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
+L L T QL ++H+ +I G + S +A++++ YA F + +VF
Sbjct: 13 QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 72
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
A ++ LWNSI+R NGL+ AL LY + +++ + D +TFP VI AC +
Sbjct: 73 LA--SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGL-- 128
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
F + +H+ VL MGF +++I N LI MY + + + K+F+++ +++ +SWN
Sbjct: 129 --LDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNS 186
Query: 208 MFSGFALNFDCDGALELFKR-----MEL-EGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
+ SG+ N + ALE++ + ME+ +P+ +T TS+L + G LE
Sbjct: 187 LISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLE------- 239
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
GK +H ++I G+E N LI +Y K G
Sbjct: 240 ----------------------------FGKYVHDYMITSGYECDTTASNILINMYAKCG 271
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
++ +Q +FS ++ K+ VSWN++I Y + G ++++VF ++ D +I+W+
Sbjct: 272 NLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARD--------IITWN 323
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
+I + + L + +M+ V + T+ +L VC+ AA G+EIHG + ++
Sbjct: 324 TIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKL 383
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
+ ++ V N L+ MY KCG L VF+ ++ KD++TW ++IS GM G G+ A+ F
Sbjct: 384 GLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAF 443
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
EM AG PD VAFVA++ ACSH+GLV EG F M ++++IEP++EHYAC+VDLL R
Sbjct: 444 GEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSR 503
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLL 621
+ LL +A D + +MP++P++ +WG LL++CRM +T++AE ++ +I L + TG Y+L+
Sbjct: 504 SALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLV 563
Query: 622 SNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVL 681
SNIYAA G+W+ +R S K +GLKK G SW+E++ K+++F +G + V ++L
Sbjct: 564 SNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLL 623
Query: 682 EELALQMENKGCVPDNDIILWEM 704
LA M +G + + +L ++
Sbjct: 624 GMLAGLMAKEGYIANLQFVLHDI 646
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 226/702 (32%), Positives = 382/702 (54%), Gaps = 62/702 (8%)
Query: 9 PHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAAR 68
P F PS+ P+ + + SL LL CKT+ L+ +H Q+I TG + + + ++
Sbjct: 16 PFHFLPSSSDPPYDSLRNHPSL-----SLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSK 70
Query: 69 VLS---IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
+L I F L A +VFET + + L+WN++ R + + +ALKLYV M
Sbjct: 71 LLELCVISPHFDGLPYAISVFETIQ---EPNLLIWNTMFRGHALSSDPVSALKLYVCMIS 127
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
LG+L + +TFP ++++C +F+ GQ +H HVL++G+ ++ + LI +Y + G
Sbjct: 128 LGLLPNSYTFPFLLKSCAKSKAFKE----GQQIHGHVLKLGYDLDLFVHTSLISVYVQNG 183
Query: 186 QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
++ D+ K+FD+ ++ +S+ + G+A + A +LF + ++ + V+W +++S
Sbjct: 184 RLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVK----DVVSWNAMIS 239
Query: 246 SHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
+A G +E ++LF M K I + V+S CA + +G+ +H ++ GF
Sbjct: 240 GYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGS 299
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
+ + N+L+ +Y K G+++ A LF + K+
Sbjct: 300 NLKIVNSLMDLYSKCGELETACGLFEGLLYKD---------------------------- 331
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
VISW+ +IG + +EAL LF++M + N VT+ +L CA
Sbjct: 332 -----------VISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHL 380
Query: 426 AALNIGREIHGHV---VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A++IGR IH ++ ++ + N + L + L++MY KCG +E H VF I K L +WN
Sbjct: 381 GAIDIGRWIHVYIDKRLKSATNASSL-RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 439
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
+MI G+ M+G + A F M + G +PD + FV +LSACS +G+++ GR IF M ++
Sbjct: 440 AMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQD 499
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
++I P++EHY CM+DLLG +GL +EA +++ NM MEP+ +W +LL +C++ N ++ E+
Sbjct: 500 YKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGES 559
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
A + + E G Y+LLSNIYA +GRW + AK+R KG+KKV G S IE+ +H
Sbjct: 560 FAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVH 619
Query: 663 MFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
F G+ + + +LEE+ + +E G VPD +L EM
Sbjct: 620 EFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEM 661
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/665 (33%), Positives = 380/665 (57%), Gaps = 35/665 (5%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAA-RVLSIYARFGRLFDARNV 85
N+SL+ LL+QC+++ L +H L+++G+ AS+ L ++L +Y++FG + A +
Sbjct: 2 NHSLIS---KLLKQCRSLKTLTTIHAHLLISGSIASSDLTLNKLLRLYSKFGAVSYAHKL 58
Query: 86 FETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
F+ P + +S LW +++ N YENA ++KM + ++ FT V++A +
Sbjct: 59 FDETP---EPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVSRL 115
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
G R G +V+ ++ G++ ++ + N +I ++ + G+M + ++FD++ ++ +SW
Sbjct: 116 G----RIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSW 171
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
N M +G+ N D A +LF RME E N ++WTS++ + + G L E LF+ M +
Sbjct: 172 NSMITGYGNNGRVDIARKLFDRME----ERNVISWTSMIQGYVKAGDLLEARVLFERMPE 227
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKV--IHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
+ + ++ +SV +AA ++ ++ IH V N +I K G++
Sbjct: 228 KDLASWKVMVSAYMSVGNLVAARNLFELMPIHD----------VGTWNLMISGCCKAGEM 277
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
A+ F ++E+N+ SW +I Y + G D A VF Q M N+++WS +
Sbjct: 278 DAAKEFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFDQ--------MPEKNLVAWSTM 329
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
IG +A G +L L++ + + + G++S C++ + + V S+
Sbjct: 330 IGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQLGVPDTAESVICDFVGPSL 389
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
N+ V L++MY KCG +E VFE +++KDL ++++I+ + +GL E+A++ F E
Sbjct: 390 FPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSEDAISLFSE 449
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M +A KPDGVAF+ VL+AC+H GLV EGRR+F M+ E+ I+P +HYACMVD+LGRAG
Sbjct: 450 MQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAG 509
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
L+EA ++ +MP+ PNA VWG LL++CR+H N +AEA A+++F + +G+Y+LL N
Sbjct: 510 CLEEAHSLICSMPVAPNATVWGALLSACRVHLNVQLAEAAATELFQIEPNNSGNYVLLFN 569
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
IYA +G+W+D +KVR + ++K G SWIE+ IH F G+ D + + +LE
Sbjct: 570 IYADAGQWDDFSKVRAMIRENRVRKNRGSSWIELGSVIHEFVMGDKSHFDSERIFFMLEL 629
Query: 684 LALQM 688
L M
Sbjct: 630 LCKDM 634
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/647 (33%), Positives = 363/647 (56%), Gaps = 23/647 (3%)
Query: 59 ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
A +AF +LS+YA+ GRL DAR VF P + ++ W ++ G + +A+K
Sbjct: 93 ARRNAFTWNSLLSMYAKSGRLADARVVFAQMP---ERDAVSWTVMVVGLNRAGRFWDAVK 149
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
++ M G+ F V+ +C + G+ VH+ V+++G V + N ++
Sbjct: 150 TFLDMVGEGLAPSQFMLTNVLSSCAATEAR----GIGRKVHSFVIKLGLSSCVPVANSVL 205
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
MY K G + +F++++V++ SWN M S + D AL +F+ ME E + V
Sbjct: 206 YMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENME----ERSIV 261
Query: 239 TWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
+W ++++ + + G + + F M+ +E + VLS CA+L MGK +H +
Sbjct: 262 SWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSY 321
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE--IEEKNIVSWNALITSYAEAGLCD 355
+++ G + NALI Y K G V+ A+ + + + + N++S+ AL+ Y + G
Sbjct: 322 ILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTK 381
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
+A EVF + D VI+W+A+I + NG+ +EA++LFR M + NS T+
Sbjct: 382 QAREVFDVMNNRD--------VIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTL 433
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI-E 474
+ +LS CA A L G++IH +R +++ V N ++ +Y + G + VF+QI
Sbjct: 434 AAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICW 493
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
+K+ +TW SMI +GLGE A+ FEEM+ G KPD V ++ V SAC+HAG +++G+R
Sbjct: 494 RKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKR 553
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
++ M+ E I P+M HYACMVDLL RAGLL EA + ++ MP+ P+ VWG+LL +CR+
Sbjct: 554 YYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVR 613
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
KN D+AE A ++ + + +G+Y L+N+Y+A GRW DAA++ K K +KK G SW
Sbjct: 614 KNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSW 673
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
V+ K+H+F + + L +C+ E+ +++ G VPD + +L
Sbjct: 674 THVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFVPDLNSVL 720
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 228/482 (47%), Gaps = 53/482 (10%)
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF----KLFDKVRV--KNYISWN 206
S G+ +H H ++ G + ++ N L+ YA+ G F +LFD + +N +WN
Sbjct: 42 SAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWN 101
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
+ S +A + A +F +M E + V+WT ++ R GR + + F M
Sbjct: 102 SLLSMYAKSGRLADARVVFAQMP----ERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGE 157
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
G+ + VLS CA A +G+ +H FVIK G V V N+++ +YGK GD + A
Sbjct: 158 GLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETA 217
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+ +F ++ ++ SWNA+++ Y G D A+ +F +ME +++SW+A+I
Sbjct: 218 RAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFE--------NMEERSIVSWNAIIAG 269
Query: 387 FASNGRGEEALDLFRKMQLAKVV-ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
+ NG + AL F +M A + + T++ +LS CA L +G+++H +++R M
Sbjct: 270 YNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPY 329
Query: 446 NILVQNGLLNMYMKCGCLE-----------------------EGHL----------VFEQ 472
+ + N L++ Y K G +E EG++ VF+
Sbjct: 330 SSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDV 389
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+ +D+I W +MI GY NG + A+ F MI +G +P+ AVLSAC+ + G
Sbjct: 390 MNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYG 449
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
++I +R + E + ++ + R+G + A + + W +++ +
Sbjct: 450 KQIHCRAIRSLQ-EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALA 508
Query: 593 MH 594
H
Sbjct: 509 QH 510
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 139/311 (44%), Gaps = 41/311 (13%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C ++ L KQ+H + I + S ++ ++++YAR G + AR VF+ +
Sbjct: 436 VLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICW-- 493
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRF 152
+ ++ W S++ +GL E A+ L+ +M ++GV D T+ V AC G + +
Sbjct: 494 RKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKR 553
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV-KNYISWNMMFSG 211
+ Q+++ H G + ++ + A+ G ++++ + ++ V + + W + +
Sbjct: 554 YYEQMLNEH----GIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 609
Query: 212 FALNFDCDGALELFKRMELEGLEP-NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI-- 268
+ + D L +L ++P N +++L + ++ CGR + ++ + + + +
Sbjct: 610 CRVRKNAD--LAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDAARIWKLRKDKAVKK 667
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
E G + H+ +H F G +D + + IC K A
Sbjct: 668 ETG-------------FSWTHVQSKVHVF----GADDVLHPQRDAIC--------KKAAE 702
Query: 329 LFSEIEEKNIV 339
++ EI++ V
Sbjct: 703 MWEEIKKAGFV 713
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 37/161 (22%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSM---------------------------------- 443
LL + + + GR IH H V+ +
Sbjct: 31 LLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDI 90
Query: 444 ---NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
+N N LL+MY K G L + +VF Q+ ++D ++W M+ G G +A+ T
Sbjct: 91 PYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKT 150
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
F +M+ G P VLS+C+ GR++ +++
Sbjct: 151 FLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIK 191
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 225/667 (33%), Positives = 366/667 (54%), Gaps = 39/667 (5%)
Query: 29 SLLD------CFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDA 82
SLLD + LL+ C+T++ KQVH + TG + F+ ++L +Y RFG L DA
Sbjct: 54 SLLDKQIDSSTYASLLESCRTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDA 113
Query: 83 RNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
VF P + + W +IL V+V +G +E AL L+ K++ + + F FP+V++ C
Sbjct: 114 NLVFVKMP---QRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLC 170
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
G R VL++G Q +H V + + M + K+F VKN
Sbjct: 171 ---GGLR------------VLELGRQ--LHGV-----VIKRCADMGSALKIFSGFSVKNV 208
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-D 261
+S+N M G+ N + + A ELF +MEL G + ++W S++S +A +E + +F D
Sbjct: 209 VSYNTMIVGYCENGNVEKAKELFDQMELVG--KDTISWNSMISGYADNLLFDEALSMFRD 266
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
++ + GIE + + VL+ CAD+A+ GK +H + G FV AL+ +Y K
Sbjct: 267 LLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCE 326
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
D+K AQ F + E++ +WN LI+ YA C++ + + ++K+ G E PNV +W+
Sbjct: 327 DLKAAQLAFDGVTERDTATWNVLISGYA---CCNQLENIQNLIQKMKGDGFE-PNVYTWN 382
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
+I NG E AL LF +MQ + + + T+ +L CA A + G+++H H +R
Sbjct: 383 GIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQ 442
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
++ + L++MY KCG ++ V+ +I +L++ N+M++ Y M+G G+ +A F
Sbjct: 443 GYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALF 502
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
M+ GF+PD V F++VLS+C HAG V G FD+M + + P ++HY C+VDLL R
Sbjct: 503 RNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTY-YNVTPSLKHYTCIVDLLSR 561
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLL 621
AG L EA ++VK +P +P++ +WG LL C + N ++ E A + L TG+Y+LL
Sbjct: 562 AGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLL 621
Query: 622 SNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVL 681
+N+YA +GRW D + R K +G+ K G SWIE + IH+F S + +++ L
Sbjct: 622 ANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTL 681
Query: 682 EELALQM 688
+ L M
Sbjct: 682 DNLNTHM 688
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 235/689 (34%), Positives = 384/689 (55%), Gaps = 36/689 (5%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS YA+ GRL +A VFE P + S+ W +++ G +ENA+ ++ +M V
Sbjct: 85 ILSGYAKGGRLEEAHRVFEEMP---EPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDV 141
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
FT V+ +C + G+ VH+ V++ G + + N L+ MYAK G
Sbjct: 142 PPTQFTLTNVLASCAAVECL----GIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPV 197
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ +FD++++K+ SWN M S + D A F++M +E + V+W +++S +
Sbjct: 198 TAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQM----IERDVVSWNAMISGYN 253
Query: 249 RCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
+ G E +D+F M+ + +A LS CA+L +GK IH +I+ F+ +
Sbjct: 254 QHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFG 313
Query: 308 FVKNALICVYGKHGDVKVAQNLFSE--IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
V NALI +Y K G V++AQ + + I +++++ AL+ Y + G + A +F L
Sbjct: 314 AVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLR 373
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
D V++W+A+I + NG ++A++LFR M N+ T++ +LSV +
Sbjct: 374 VRD--------VVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSL 425
Query: 426 AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE-KKDLITWNSM 484
A+L+ GR+IH R ++ V N L+ MY K G + + VF I K+D ITW SM
Sbjct: 426 ASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSM 485
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I +GLGE AL FE M+E G KPD + +V VLSAC+H GLV +GR +++M +
Sbjct: 486 IIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHK 545
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
I P HYACM+DL GRAGLLQEA ++NMP+EP+ WG+LL SC++HKN ++AE A
Sbjct: 546 IIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAA 605
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
++ + E +G+Y L+N+Y+A G+WE+AA +R S K KG+KK G SW+++K K+H+F
Sbjct: 606 ERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIF 665
Query: 665 SSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSK 724
+ L + E++ ++ +++ G VPD + +L ++ ++ +K + I S
Sbjct: 666 GVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDL--EEELK-------EQILSH 716
Query: 725 HRIVGFRNLKLGLRLLLSLRSTNGQLMKN 753
H L + L+ + +T ++MKN
Sbjct: 717 HS----EKLAIAFGLICTPENTTLRIMKN 741
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 243/483 (50%), Gaps = 48/483 (9%)
Query: 147 SFRFRFSF-GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
S +F+ F G+ +H +++ G V ++N L+ YAK G + D+ ++FD++ VK+ SW
Sbjct: 23 SLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSW 82
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
N++ SG+A G LE R+ E EP+ V+WT+++ + + G+ E + +F M
Sbjct: 83 NIILSGYAKG----GRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVS 138
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
+ + VL+ CA + +G+ +H FV+K G Y+ V N+L+ +Y K GD
Sbjct: 139 DDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVT 198
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A+ +F ++ K+ SWN +I+S+ ++GL D A F Q+ +ER +V+SW+A+I
Sbjct: 199 AKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQM-------IER-DVVSWNAMIS 250
Query: 386 AFASNGRGEEALDLFRKMQL-AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
+ +G EALD+F KM + + + T++ LS CA L +G++IH H++R +
Sbjct: 251 GYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFD 310
Query: 445 KNILVQNGLLNMYMKCGCLE-----------------------EGHL----------VFE 471
V N L++MY K G +E +G++ +F+
Sbjct: 311 TFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFD 370
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
+ +D++ W +MI GY NG ++A+ F MI+ G KP+ +LS S ++
Sbjct: 371 SLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDH 430
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
GR+I R + ++ + ++G + +A + + + + W +++ +
Sbjct: 431 GRQIHASATRSGNAS-SVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIAL 489
Query: 592 RMH 594
H
Sbjct: 490 AQH 492
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
K++ N +L+ Y K G LEE H VFE++ + D ++W +MI GY G ENA+ F EM
Sbjct: 77 KSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREM 136
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+ P VL++C+ + GR++ +V+ + + ++++ ++G
Sbjct: 137 VSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKH-GLSSYISVANSLLNMYAKSGD 195
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
A + M ++ + W T+++S D+A+ Q+
Sbjct: 196 PVTAKIVFDRMKLKSTS-SWNTMISSHMQSGLVDLAQVQFEQM 237
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 112/224 (50%), Gaps = 9/224 (4%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+Q+H +G +S ++ ++++YA+ G + DAR VF + K ++ W S++
Sbjct: 432 RQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHW--KRDTITWTSMIIAL 489
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+GL E AL L+ +M + G+ D T+ V+ AC +G S+ ++ N +
Sbjct: 490 AQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPT 549
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELFK 226
+ +I ++ + G + ++ + + ++ + I+W + + ++ + + A +
Sbjct: 550 PSHYAC---MIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAE 606
Query: 227 RMELEGLEP-NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
R+ L +EP N +++L + ++ CG+ E ++ M+ +G++
Sbjct: 607 RLLL--IEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVK 648
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/737 (30%), Positives = 372/737 (50%), Gaps = 116/737 (15%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L C + + + ++++N ++ G + F+ +++++ + G + DA VF+ P
Sbjct: 214 FVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLP 273
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ W S++ +G ++ A L+ +M + GV D F ++RAC +
Sbjct: 274 ---TRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ VH + ++G+ +++ ++ MY K G M D+ ++FD V+ +N +SW M +
Sbjct: 331 ----GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIA 386
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTW------------------------------ 240
GFA + D A F +M G+EPN VT+
Sbjct: 387 GFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGS 446
Query: 241 -----TSLLSSHARCGRLEETMDLFDMMRKR----------------------------- 266
T+LLS +A+CG L++ +F+ + K+
Sbjct: 447 DDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALL 506
Query: 267 --GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
GI+ + +L+VC + +GK +H ++K G E + V NAL+ ++ GD+
Sbjct: 507 KEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLM 566
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A+NLF++ M + +++SW+ +I
Sbjct: 567 SAKNLFND---------------------------------------MPKRDLVSWNTII 587
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
F +G+ + A D F+ MQ + + + +T +GLL+ CA AL GR +H + + +
Sbjct: 588 AGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFD 647
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
++LV GL++MY KCG +E+ H VF ++ KK++ +W SMI+GY +G G+ AL F +M
Sbjct: 648 CDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQM 707
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+ G KPD + FV LSAC+HAGL+ EG F M +EF IEP+MEHY CMVDL GRAGL
Sbjct: 708 QQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGL 766
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNI 624
L EA + + M +EP++ VWG LL +C++H N ++AE A + L G +++LSNI
Sbjct: 767 LNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNI 826
Query: 625 YAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
YAA+G W++ AK+R +G+ K GQSWIEV K+H F S + + + LE L
Sbjct: 827 YAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERL 886
Query: 685 ALQMENKGCVPDNDIIL 701
++M G VPD +L
Sbjct: 887 HMEMRQLGYVPDTRYVL 903
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 141/571 (24%), Positives = 271/571 (47%), Gaps = 88/571 (15%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ LLQ C K + ++++N + +G F+ ++++YA+ G A+ +F+
Sbjct: 113 YSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFD--- 169
Query: 91 FDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
D + + WN +L V +GLYE A KL+ +M + V D TF ++ AC +
Sbjct: 170 -DMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNV- 227
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+ ++N +L+ G+ ++ + LI M+ K G + D+ K+FD + ++
Sbjct: 228 ---DKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRD-------- 276
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
VTWTS+++ AR GR ++ +LF M + G++
Sbjct: 277 ---------------------------LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
A +L C A GK +H + + G++ ++V A++ +Y K G ++ A +
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEV 369
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
F ++ +N+VSW A+I +A+ G DEA F+++ ++ G PN +++ +++GA
Sbjct: 370 FDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKM--IESGI--EPNRVTFMSILGA--- 422
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
C+ +AL G++I H++ + V
Sbjct: 423 --------------------------------CSSPSALKRGQQIQDHIIEAGYGSDDRV 450
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
+ LL+MY KCG L++ H VFE+I K++++ WN+MI+ Y + +NALATF+ +++ G
Sbjct: 451 RTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGI 510
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
KP+ F ++L+ C + + G+ + ++ + +E + +V + G L A
Sbjct: 511 KPNSSTFTSILNVCKSSDSLELGKWVH-FLIMKAGLESDLHVSNALVSMFVNCGDLMSAK 569
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
++ +MP + + W T++ H VA
Sbjct: 570 NLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 172/359 (47%), Gaps = 41/359 (11%)
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
++L+ ++ G+ E M + + + I++ + + +L +C G+ I+ + K
Sbjct: 80 AVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKS 139
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
G + +F+ N LI +Y K G+ A+ +F ++ EK++ SWN L+ Y + GL +EA ++
Sbjct: 140 GVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLH 199
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
Q M V + T +L+
Sbjct: 200 EQ---------------------------------------MVQDSVKPDKRTFVSMLNA 220
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
CA++ ++ GRE++ +++ + ++ V L+NM++KCG + + VF+ + +DL+TW
Sbjct: 221 CADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTW 280
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
SMI+G +G + A F+ M E G +PD VAFV++L AC+H + +G+++ M +
Sbjct: 281 TSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARM-K 339
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
E + ++ ++ + + G +++A ++ ++ N W ++ H D A
Sbjct: 340 EVGWDTEIYVGTAILSMYTKCGSMEDALEVF-DLVKGRNVVSWTAMIAGFAQHGRIDEA 397
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 138/292 (47%), Gaps = 36/292 (12%)
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+AV+ + G+ EA+ + ++ + + T S LL +C + L G I+ H+ +
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
+ +I + N L+NMY KCG +F+ + +KD+ +WN ++ GY +GL E A
Sbjct: 139 SGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE------------------ 542
E+M++ KPD FV++L+AC+ A V++GR +++++++
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 543 ----------FRIEPQME--HYACMVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTL 587
F P + + M+ L R G ++A ++ + M E P+ + +L
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 588 LNSCRMHKNTDVAEAMASQI--FGLITETTGSYMLLSNIYAASGRWEDAAKV 637
L +C + + + + +++ G TE +LS +Y G EDA +V
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILS-MYTKCGSMEDALEV 369
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 225/737 (30%), Positives = 372/737 (50%), Gaps = 116/737 (15%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L C + + + ++++N ++ G + F+ +++++ + G + DA VF+ P
Sbjct: 214 FVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLP 273
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ W S++ +G ++ A L+ +M + GV D F ++RAC +
Sbjct: 274 ---TRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQ 330
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ VH + ++G+ +++ ++ MY K G M D+ ++FD V+ +N +SW M +
Sbjct: 331 ----GKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIA 386
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTW------------------------------ 240
GFA + D A F +M G+EPN VT+
Sbjct: 387 GFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGS 446
Query: 241 -----TSLLSSHARCGRLEETMDLFDMMRKR----------------------------- 266
T+LLS +A+CG L++ +F+ + K+
Sbjct: 447 DDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALL 506
Query: 267 --GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
GI+ + +L+VC + +GK +H ++K G E + V NAL+ ++ GD+
Sbjct: 507 KEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLM 566
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A+NLF++ M + +++SW+ +I
Sbjct: 567 SAKNLFND---------------------------------------MPKRDLVSWNTII 587
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
F +G+ + A D F+ MQ + + + +T +GLL+ CA AL GR +H + + +
Sbjct: 588 AGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFD 647
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
++LV GL++MY KCG +E+ H VF ++ KK++ +W SMI+GY +G G+ AL F +M
Sbjct: 648 CDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQM 707
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+ G KPD + FV LSAC+HAGL+ EG F M +EF IEP+MEHY CMVDL GRAGL
Sbjct: 708 QQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGL 766
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNI 624
L EA + + M +EP++ VWG LL +C++H N ++AE A + L G +++LSNI
Sbjct: 767 LNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNI 826
Query: 625 YAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
YAA+G W++ AK+R +G+ K GQSWIEV K+H F S + + + LE L
Sbjct: 827 YAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERL 886
Query: 685 ALQMENKGCVPDNDIIL 701
++M G VPD +L
Sbjct: 887 HMEMRQLGYVPDTRYVL 903
Score = 183 bits (464), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/512 (23%), Positives = 235/512 (45%), Gaps = 107/512 (20%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ ++NH+ + G Q ++ + N LI MYAK G + ++FD +R K+ SWN++ G+
Sbjct: 129 GERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQ 188
Query: 215 NFDCDGALELFKRMELEGLEPN---FVT-------------------------W------ 240
+ + A +L ++M + ++P+ FV+ W
Sbjct: 189 HGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFV 248
Query: 241 -TSLLSSHARCG-------------------------------RLEETMDLFDMMRKRGI 268
T+L++ H +CG R ++ +LF M + G+
Sbjct: 249 GTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV 308
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
+ A +L C A GK +H + + G++ ++V A++ +Y K G ++ A
Sbjct: 309 QPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALE 368
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+F ++ +N+VSW A+I +A+ G DEA F+++ ++ G PN +++ +++GA
Sbjct: 369 VFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKM--IESGI--EPNRVTFMSILGA-- 422
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
C+ +AL G++I H++ +
Sbjct: 423 ---------------------------------CSSPSALKRGQQIQDHIIEAGYGSDDR 449
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
V+ LL+MY KCG L++ H VFE+I K++++ WN+MI+ Y + +NALATF+ +++ G
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEG 509
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
KP+ F ++L+ C + + G+ + ++ + +E + +V + G L A
Sbjct: 510 IKPNSSTFTSILNVCKSSDSLELGKWVH-FLIMKAGLESDLHVSNALVSMFVNCGDLMSA 568
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
++ +MP + + W T++ H VA
Sbjct: 569 KNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVA 599
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 173/359 (48%), Gaps = 41/359 (11%)
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
++L+ ++ G+ E M + + + I++ + + +L +C G+ I+ + K
Sbjct: 80 AVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKS 139
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
G + +F++N LI +Y K G+ A+ +F ++ EK++ SWN L+ Y + GL +EA ++
Sbjct: 140 GVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLH 199
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
Q M V + T +L+
Sbjct: 200 EQ---------------------------------------MVQDSVKPDKRTFVSMLNA 220
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
CA++ ++ GRE++ +++ + ++ V L+NM++KCG + + VF+ + +DL+TW
Sbjct: 221 CADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTW 280
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
SMI+G +G + A F+ M E G +PD VAFV++L AC+H + +G+++ M +
Sbjct: 281 TSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARM-K 339
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
E + ++ ++ + + G +++A ++ ++ N W ++ H D A
Sbjct: 340 EVGWDTEIYVGTAILSMYTKCGSMEDALEVF-DLVKGRNVVSWTAMIAGFAQHGRIDEA 397
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 139/292 (47%), Gaps = 36/292 (12%)
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+AV+ + G+ EA+ + ++ + + T S LL +C + L G I+ H+ +
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
+ +I ++N L+NMY KCG +F+ + +KD+ +WN ++ GY +GL E A
Sbjct: 139 SGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE------------------ 542
E+M++ KPD FV++L+AC+ A V++GR +++++++
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 543 ----------FRIEPQME--HYACMVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTL 587
F P + + M+ L R G ++A ++ + M E P+ + +L
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 588 LNSCRMHKNTDVAEAMASQI--FGLITETTGSYMLLSNIYAASGRWEDAAKV 637
L +C + + + + +++ G TE +LS +Y G EDA +V
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILS-MYTKCGSMEDALEV 369
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/647 (34%), Positives = 362/647 (55%), Gaps = 23/647 (3%)
Query: 59 ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
A +AF +LS+YA+ GRL DA VF P ++ W ++ +G + +A+K
Sbjct: 277 ARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMP---DRDAVSWTIMIVGLNRSGRFWDAVK 333
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
++ M G FT V+ +C M + G+ VH V+++G V + N ++
Sbjct: 334 TFLDMVSEGFAPSQFTLTNVLSSCAAMEAC----GVGRKVHPFVVKLGLSSCVPVANSVL 389
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
MY K G + +F++++V++ SWN+M S + + A+ +F+ M +E + V
Sbjct: 390 YMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENM----VERSIV 445
Query: 239 TWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
+W ++++ + + G + F M+ +E A + VLS CA+L MGK +H +
Sbjct: 446 SWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSY 505
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE--IEEKNIVSWNALITSYAEAGLCD 355
+++ G + NALI Y K G V+ A+ + + + + N++S+ AL+ Y + G
Sbjct: 506 ILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTK 565
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
+A E+F + D VI+W+A+I + NG+ +EA++LFR M L NS T+
Sbjct: 566 QAREIFDIMNNRD--------VIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTL 617
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI-E 474
+ +LS CA A L+ G++IH +R +++ V N ++ +Y + G + VF+QI
Sbjct: 618 AAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICW 677
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
+K+ ITW SMI +GLGE A+ FEEM+ G KPD + +V VLSAC+HAG V++G+R
Sbjct: 678 RKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKR 737
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
++ M E I PQM HYACMVDL RAGLL EA + ++ MP+ P+ VWG+LL +CR+
Sbjct: 738 YYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVR 797
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
KN D+AE A ++ + +G+Y L+N+Y+A GRW DAA++ K KG+KK G SW
Sbjct: 798 KNADLAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSW 857
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
V+ K+H+F + + L ++ E+ +++ G VPD + +L
Sbjct: 858 THVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVL 904
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 227/482 (47%), Gaps = 53/482 (10%)
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK----LFDKVRV--KNYISWN 206
S G+ +H H ++ G + ++ N L+ YA +G F+ LFD + +N +WN
Sbjct: 226 SAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIPYARRNAFTWN 285
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
+ S +A + A +F M + + V+WT ++ R GR + + F M
Sbjct: 286 SLLSLYAKSGRLPDAHVVFAEMP----DRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSE 341
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
G + VLS CA + A +G+ +H FV+K G V V N+++ +YGK GD + A
Sbjct: 342 GFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETA 401
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+ +F ++ +++ SWN +++ Y G + AV +F + +ER +++SW+ +I
Sbjct: 402 RAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENM-------VER-SIVSWNTIIAG 453
Query: 387 FASNGRGEEALDLFRKMQLAKVV-ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
+ NG AL F +M A + ++ T++ +LS CA L +G+++H +++R M
Sbjct: 454 YNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPC 513
Query: 446 NILVQNGLLNMYMKCGCLE-----------------------EGHL----------VFEQ 472
+ + N L++ Y K G +E EG++ +F+
Sbjct: 514 SSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDI 573
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+ +D+I W +MI GY NG + A+ F MI G +P+ AVLSAC+ ++ G
Sbjct: 574 MNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYG 633
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
++I +R + E + ++ + R+G + A + + W +++ +
Sbjct: 634 KQIHCKAIRSLQ-EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMA 692
Query: 593 MH 594
H
Sbjct: 693 QH 694
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 234/546 (42%), Gaps = 94/546 (17%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS-----SLL--- 99
++VH ++ G ++ +A VL +Y + G AR VFE SS SL
Sbjct: 367 RKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQ 426
Query: 100 --------------------WNSILRVNVSNGLYENALKLYVKMRKLGVL-GDGFTFPLV 138
WN+I+ NGL ALK + +M + D FT V
Sbjct: 427 GRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSV 486
Query: 139 IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR 198
+ AC + + G+ +H+++L+ G + I+N LI YAK G + + ++ D+
Sbjct: 487 LSACANLRMLK----MGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAV 542
Query: 199 VK--NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
V N IS+ + G+ D A E+F M + + WT+++ + + G+ +E
Sbjct: 543 VADLNVISFTALLEGYVKLGDTKQAREIFDIMN----NRDVIAWTAMIVGYHQNGQNDEA 598
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
M+LF M G E + +A VLS CA LA GK IH I+ E V V NA+I V
Sbjct: 599 MELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITV 658
Query: 317 YGKHGDVKVAQNLFSEI-EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
Y + G V +A+ +F +I K ++W ++I + A+ GL ++AV +F ++ ++ +P
Sbjct: 659 YARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVG----VKP 714
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKM-------------------------------- 403
+ I++ V+ A A G ++ + +M
Sbjct: 715 DHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEF 774
Query: 404 -QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
Q V ++V LL+ C ++ G ++ + + N + L N+Y CG
Sbjct: 775 IQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPH-NSGAYSALANVYSACGR 833
Query: 463 LEEGHLVF-----EQIEKKDLITWNSM---ISGYGM--------NGLGENALATFEEMIE 506
+ ++ + ++K+ +W + + +G + + A +EE+ +
Sbjct: 834 WNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSIYRKAAEMWEEIKK 893
Query: 507 AGFKPD 512
AGF PD
Sbjct: 894 AGFVPD 899
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 143/304 (47%), Gaps = 46/304 (15%)
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG----KHGDVKVAQNLFS 331
A +L +C G+ IH +K G ++ N L+ Y G + A+ LF
Sbjct: 213 ARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFD 272
Query: 332 EIE--EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
+I +N +WN+L++ YA++G +A VF+++ D +SW+ +I
Sbjct: 273 DIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDA--------VSWTIMIVGLNR 324
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
+GR +A+ F M + T++ +LS CA A +GR++H VV++ ++ + V
Sbjct: 325 SGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPV 384
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIE-------------------------------KKDL 478
N +L MY KCG E VFE+++ ++ +
Sbjct: 385 ANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSI 444
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEA-GFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
++WN++I+GY NGL AL F M+ A +PD +VLSAC++ ++ G+++
Sbjct: 445 VSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHS 504
Query: 538 MMVR 541
++R
Sbjct: 505 YILR 508
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 117/241 (48%), Gaps = 18/241 (7%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C ++ L KQ+H + I + S ++ ++++YAR G + AR VF+ +
Sbjct: 620 VLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICW-- 677
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK---FMGSFRF 150
+ ++ W S++ +GL E A+ L+ +M ++GV D T+ V+ AC F+ +
Sbjct: 678 RKETITWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKR 737
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV-KNYISWNMMF 209
+ Q H V QM ++ ++A+ G ++++ + ++ V + + W +
Sbjct: 738 YYEQMQNEHGIVPQMSHYAC------MVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLL 791
Query: 210 SGFALNFDCDGALELFKRMELEGLEP-NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+ + + D L +L ++P N +++L + ++ CGR + ++ + + +G+
Sbjct: 792 AACRVRKNAD--LAELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGV 849
Query: 269 E 269
+
Sbjct: 850 K 850
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/678 (32%), Positives = 374/678 (55%), Gaps = 45/678 (6%)
Query: 54 LIVTGANASAFLAARVL--SIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNG 111
+++TG + A+R++ S + F + R +F F ++ +WN ++R +
Sbjct: 1 MLLTGFIRETYAASRLIKFSTHFPFIHIDYTRRIFN---FIENTNCFMWNMMIRAYIQTN 57
Query: 112 LYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNV 171
A LY M + D +T+PL+I+AC S R + VHNHVL++GF +V
Sbjct: 58 SPHFAFTLYKSMLSNYLGADNYTYPLLIQAC----SIRRSEWEAKQVHNHVLKLGFDSDV 113
Query: 172 HIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL- 230
++ N LI ++ M+D+ ++F++ V + +SWN + +G+ + + A ++ +M
Sbjct: 114 YVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPER 173
Query: 231 --------------------------EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
E LE + VTW++L++ + EE + F M
Sbjct: 174 SIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMH 233
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
K G+ V LS CA+L +MGK+IH +K G E Y+ ++NALI +Y K GD+
Sbjct: 234 KIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIM 293
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
VA+ LF E +++SWN++I+ Y + L D A +F SM +V+SWS++I
Sbjct: 294 VARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFD--------SMPEKDVVSWSSMI 345
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
+A N +E L LF++MQ++ + T+ ++S CA AAL G+ +H ++ R +
Sbjct: 346 SGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLT 405
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
N+++ L++MYMKCGC+E VF + +K + TWN++I G MNGL E++L F M
Sbjct: 406 INVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNM 465
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+ P+ + F+ VL AC H GLV+EG+ F M+ + +I+P ++HY CMVDLLGRAG
Sbjct: 466 KKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGK 525
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNI 624
LQEA +++ MPM P+ WG LL +C+ H ++++ + ++ L + G ++LLSNI
Sbjct: 526 LQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNI 585
Query: 625 YAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
YA+ G+W+D ++R + K+ G S IE IH F +G+ D+ + ++L E+
Sbjct: 586 YASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEM 645
Query: 685 ALQMENKGCVPD-NDIIL 701
A++++ +G PD N+++L
Sbjct: 646 AMKLKLEGYTPDINEVLL 663
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 134/548 (24%), Positives = 234/548 (42%), Gaps = 111/548 (20%)
Query: 37 LLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFD 92
L+Q C ++ + KQVHN ++ G ++ ++ +++ ++ + DA VF E++ D
Sbjct: 84 LIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLD 143
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF------PLVIRACK--- 143
S+ WNSIL + G E A +Y +M + ++ LV+ ACK
Sbjct: 144 ----SVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFD 199
Query: 144 -----------------------------FMGSFRFRFSFGQIV---------------- 158
F+G + ++V
Sbjct: 200 EMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNM 259
Query: 159 ----HNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
H+ L++G + +++ N LI MY+K G + + KLFD+ + + ISWN M SG+
Sbjct: 260 GKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLK 319
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
D A +F M E + V+W+S++S +A+ +ET+ LF M+ G +
Sbjct: 320 CNLVDNAKAIFDSMP----EKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETT 375
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ V+S CA LAA GK +H ++ + G V + LI +Y K G V+ A +F +
Sbjct: 376 LVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMI 435
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
EK I +WNALI A GL + ++++FS ++K PN I++ V+GA G +
Sbjct: 436 EKGISTWNALILGLAMNGLVESSLDMFSNMKKCH----VTPNEITFMGVLGACRHMGLVD 491
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
E F M IH H ++ N+ ++
Sbjct: 492 EGQHHFYSM------------------------------IHDHKIQ----PNVKHYGCMV 517
Query: 455 NMYMKCGCLEEGHLVFEQIE-KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++ + G L+E + ++ D+ TW +++ +G E ++IE +PD
Sbjct: 518 DLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE--LQPDH 575
Query: 514 VAFVAVLS 521
F +LS
Sbjct: 576 DGFHVLLS 583
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/712 (32%), Positives = 379/712 (53%), Gaps = 59/712 (8%)
Query: 32 DCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARF----GRLFDARN 84
D + LLQ C+T + +H + + G ASA+L +LS Y G L DAR
Sbjct: 27 DHYARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARR 86
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK------------------- 125
+F+ P + + WNS+L + +G +A ++ +M +
Sbjct: 87 LFDEIPL-ARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRF 145
Query: 126 -------LGVLGDGFT---FPL--VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHI 173
L + DGFT F L V+ +C + + G+ VH+ V+++G V +
Sbjct: 146 GEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAG----AVGRKVHSFVVKLGLGSCVPV 201
Query: 174 VNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL 233
N ++ MY K G + +F+++ V++ SWN M S D A LF+ M
Sbjct: 202 ANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMP---- 257
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
+ + V+W ++++ + + G + + LF M+ + + I VLS CA+L +GK
Sbjct: 258 DRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGK 317
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK--NIVSWNALITSYAE 350
+H ++++ V NALI Y K G V+ A+ + + E N++S+ AL+ Y +
Sbjct: 318 QVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVK 377
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
G + A E+F G M +V++W+A+I + NGR +EA+DLFR M
Sbjct: 378 IGDMESAREMF--------GVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEP 429
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
NS T++ +LSVCA A L+ G++IH +R + ++ V N ++ MY + G +F
Sbjct: 430 NSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMF 489
Query: 471 EQI-EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
+Q+ +K+ ITW SMI +G GE A+ FEEM+ AG +PD + +V VLSACSHAG V
Sbjct: 490 DQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFV 549
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
NEG+R +D + E +I P+M HYACMVDLL RAGL EA + ++ MP+EP+A WG+LL+
Sbjct: 550 NEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLS 609
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
+CR+HKN ++AE A ++ + +G+Y ++N+Y+A GRW DAA++ + K K ++K
Sbjct: 610 ACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKE 669
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
G SW ++ KIH+F + + + V + + +++ G VPD +L
Sbjct: 670 TGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVL 721
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/676 (32%), Positives = 364/676 (53%), Gaps = 58/676 (8%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
K++ Q KQ+H +I G + ++++ Y F L DA + E + L WN
Sbjct: 107 KSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNI---LHPLPWN 163
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
++ V NGL+ AL Y +M G+ D FT+P V++AC + +FG+ +H
Sbjct: 164 LLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKAC----GEKLDIAFGKKLHAS 219
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
+ N+ + N L+ MYAK G++S + LF+ + ++ +SWN M SG+A A
Sbjct: 220 INASCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEA 279
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
ELF +M +EG+E N +TW ++ + G EE ++L MR GI++ + A + L
Sbjct: 280 FELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGA 339
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
C+ + A +G+ IHG I+ ++ VKNALI +Y + ++ A NLF
Sbjct: 340 CSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQ---------- 389
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
S N+I+W++++ + R EEA LFR
Sbjct: 390 -----------------------------STRTKNIITWNSMLSGYTHMDRSEEASFLFR 420
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN-ILVQNGLLNMYMKC 460
+M L+ + N VTI+ +L +CA A L G+E H +++R + K+ +L+ N L++MY +
Sbjct: 421 EMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARS 480
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
G + E +F+ I ++D +T+ S+I+GYG+ G G AL F+EM + KPD V VAVL
Sbjct: 481 GKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVL 540
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
SACSH+GLV EG ++F++M + I P++EH+ACMVDL GRAGLL +A +++ MP P+
Sbjct: 541 SACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPS 600
Query: 581 AYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRIS 640
+ +W TLL +CR+H N ++ E A ++ + E +G Y+L++N+YAA+G W AKVR
Sbjct: 601 SAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMYAAAGCWSKLAKVRTY 660
Query: 641 AKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
+ G++K G +W++V F ++ + + + +LE L M++
Sbjct: 661 MRDLGVRKAPGCAWVDVGSGFFPFLVDDTSKPHVNKLYPLLEGLTELMKDA--------- 711
Query: 701 LWEMMGKKNVKRIQRI 716
E +GK+NV + +
Sbjct: 712 --EYVGKENVGSVDDV 725
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 229/708 (32%), Positives = 379/708 (53%), Gaps = 89/708 (12%)
Query: 4 SLLHQPH--QFSP-SNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGAN 60
SL+ P F P S+P P+ ++ + SL LL CK+ LKQ+H+Q+I TG +
Sbjct: 9 SLVMPPPTLHFQPTSDP--PYKLLQNHPSLT-----LLSTCKSFQNLKQIHSQIIKTGLH 61
Query: 61 ASAFLAARVLSIYA--RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
+ F ++++ A FG L A +FE+ + + +WN+++R N + A+
Sbjct: 62 NTQFALSKLIEFCAISPFGNLSYALLLFESIE---QPNQFIWNTMIRGNSLSSSPVGAID 118
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
YV+M GV + +TFP ++++C +G+ + G+ +H HVL++G + + + LI
Sbjct: 119 FYVRMLLCGVEPNSYTFPFLLKSCAKVGATQE----GKQIHGHVLKLGLESDPFVHTSLI 174
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
MYA+ G++ + +F K +++ +S+ + +G+ L D A LF+ + + + V
Sbjct: 175 NMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVR----DAV 230
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
+W ++++ +A+ GR EE + F M++ + + VLS CA + +G + ++
Sbjct: 231 SWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWI 290
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
G + + NALI +Y K GD+ A++LF G+C++
Sbjct: 291 EDHGLGSNLRLVNALIDMYSKCGDLDKARDLFE--------------------GICEK-- 328
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
++ISW+ +IG ++ +EAL LFRKMQ + V N VT +
Sbjct: 329 -----------------DIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSI 371
Query: 419 LSVCAESAALNIGREIHGHVVRVSMN-KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
L CA AL++G+ IH ++ + + N + L++MY KCG +E VF ++ K
Sbjct: 372 LPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKS 431
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
L +WN+MISG M+G AL F +M + GF+PD + FV VLSACSHAGLV GR+ F
Sbjct: 432 LGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFS 491
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNT 597
MV ++ I P+++HY CM+DLLGRAGL EA ++KNM M+P+ +WG+LL +CR+H N
Sbjct: 492 SMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNV 551
Query: 598 DVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
++ E A +F L E G+Y+LLSNIYA +GRW+D A++R KG+KK
Sbjct: 552 ELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKX-------- 603
Query: 658 KRKIHMFSSGNSLQSDLKNVCEVLEELALQM-ENKGCVPDNDIILWEM 704
+++ ++L+E+ E G VPD +L++M
Sbjct: 604 -----------------QDIYKMLDEIDQSFGERPGXVPDTSEVLYDM 634
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 232/712 (32%), Positives = 378/712 (53%), Gaps = 59/712 (8%)
Query: 32 DCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARF----GRLFDARN 84
D + LLQ C+T + +H + + G ASA+L +LS Y G L DAR
Sbjct: 27 DHYARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARR 86
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK------------------- 125
+F+ P + + WNS+L + +G +A ++ +M +
Sbjct: 87 LFDEIPL-ARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRF 145
Query: 126 -------LGVLGDGFT---FPL--VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHI 173
L + DGFT F L V+ +C + + G+ VH+ V+++G V +
Sbjct: 146 GEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAG----AVGRKVHSFVVKLGLGSCVPV 201
Query: 174 VNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL 233
N ++ MY K G + +F+++ V++ SWN M S D A LF+ M +
Sbjct: 202 ANSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSI 261
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
V+W ++++ + + G + + LF M+ + + I VLS CA+L +GK
Sbjct: 262 ----VSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGK 317
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK--NIVSWNALITSYAE 350
+H ++++ V NALI Y K G V+ A+ + + E N++S+ AL+ Y +
Sbjct: 318 QVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVK 377
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
G + A E+F G M +V++W+A+I + NGR +EA+DLFR M
Sbjct: 378 IGDMESAREMF--------GVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEP 429
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
NS T++ +LSVCA A L+ G++IH +R + ++ V N ++ MY + G +F
Sbjct: 430 NSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMF 489
Query: 471 EQI-EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
+Q+ +K+ ITW SMI +G GE A+ FEEM+ AG +PD + +V VLSACSHAG V
Sbjct: 490 DQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFV 549
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
NEG+R +D + E +I P+M HYACMVDLL RAGL EA + ++ MP+EP+A WG+LL+
Sbjct: 550 NEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLS 609
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
+CR+HKN ++AE A ++ + +G+Y ++N+Y+A GRW DAA++ + K K ++K
Sbjct: 610 ACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKE 669
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
G SW ++ KIH+F + + + V + + +++ G VPD +L
Sbjct: 670 TGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVL 721
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/663 (33%), Positives = 376/663 (56%), Gaps = 28/663 (4%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASA-FLAARVLSIYARFGRLFDARNVFETAPFDCK 94
H++ CKT+ LK +H +L++ + AS+ F+ ++L +Y+RFG A VF+ +
Sbjct: 7 HIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEI---TQ 63
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
++ LW S++ V N Y+ A L+++MR+ + FT V++A + RF
Sbjct: 64 PNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLT----RFKG 119
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
GQ V+ VL+ GF ++ + N ++ ++ + ++ + + FD++ K+ +SWNMM SG+
Sbjct: 120 GQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGN 179
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
N D A + F RM E N V+WTS++ + + G + E LFD M + + +
Sbjct: 180 NDRVDIARKFFDRMP----ERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLA----S 231
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
V++S D+ ++I G K D N +I + K G+++ A++ F +
Sbjct: 232 WNVMVSGYMDIGDCVNARIIFG---KMPIHD-TGSWNIMISGFCKAGELESAKDFFDRMP 287
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
KN++SW ++ Y + G + A +F Q M N+++WS +IG +A NG+
Sbjct: 288 NKNVISWGIMLDGYIKNGDTNGARCLFDQ--------MPMKNLVTWSTMIGGYARNGQPL 339
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
+AL+LF + + + + I G++S C++ ++ I + V S+ ++ V L+
Sbjct: 340 KALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLI 399
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCG +E+ +FE KDL+ +++MI+ +GLG +A+ F++M A KPD V
Sbjct: 400 DMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSV 459
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F+ VL+AC+H GLV+EGR+ F M EF I+P +HYAC+VDLLGR G L+EA ++++N
Sbjct: 460 TFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRN 519
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP+ P++ VWG LL +CR+H N +AE A+++F + + +G+Y+LLSNIYAA+GRW
Sbjct: 520 MPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSV 579
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
AKVR + ++K G SWIE+ +H F G+ +D ++ +L L M+ G +
Sbjct: 580 AKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHTDSDSISLILYLLCEDMKLSGYL 639
Query: 695 PDN 697
D+
Sbjct: 640 IDS 642
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/739 (31%), Positives = 377/739 (51%), Gaps = 113/739 (15%)
Query: 20 PFSIITYNNSLLDCFDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARF 76
P NN L HLL+ C K++ + K++H + +NA + + ++ +Y
Sbjct: 2 PLRFEVKNNYL-----HLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSC 56
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
++ AR +F+ P S +LWN I+R NG ++ A+ LY M LGV + +T+P
Sbjct: 57 NQVVLARRLFDEIP---NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYP 113
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
V++AC S G +H+H G + +V + L+ YAK G + ++ +LF
Sbjct: 114 FVLKAC----SGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSS 169
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
+ ++ ++WN M +G +L CD A++L +M+ EG+ PN
Sbjct: 170 MSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPN-------------------- 209
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
+ I VL + A GK +HG+ ++ F++ V V L+ +
Sbjct: 210 ---------------SSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDM 254
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG------- 369
Y K + A+ +F + +N VSW+A+I Y + EA+E+F Q+ D
Sbjct: 255 YAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVT 314
Query: 370 -GSMERP------------------------NVISWSAVIGAFASNGRGEEALDLFRKM- 403
GS+ R +++ + ++ +A G ++A+ F +M
Sbjct: 315 LGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMN 374
Query: 404 ------------------------------QLAKVVANSVTISGLLSVCAESAALNIGRE 433
QL+ + + T+ G+L C+ AAL G
Sbjct: 375 PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 434
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
HG+++ + L+ N L++MY KCG + VF ++++ D+++WN+MI GYG++GL
Sbjct: 435 SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGL 494
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
G AL F +++ G KPD + F+ +LS+CSH+GLV EGR FD M R+F I P+MEH
Sbjct: 495 GMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI 554
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
CMVD+LGRAGL+ EA ++NMP EP+ +W LL++CR+HKN ++ E ++ +I L E
Sbjct: 555 CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPE 614
Query: 614 TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSD 673
+TG+++LLSNIY+A+GRW+DAA +RI+ K GLKK+ G SWIE+ +H F G+
Sbjct: 615 STGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQ 674
Query: 674 LKNVCEVLEELALQMENKG 692
L + LEEL ++M+ G
Sbjct: 675 LSQINRKLEELLVEMKRLG 693
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 397 bits (1021), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/670 (31%), Positives = 368/670 (54%), Gaps = 52/670 (7%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYAR--FGRLFDARNVFETAPFDCK 94
L++ CK++ QLKQ+H+Q I TG ++ + A++++ + G + AR VF+T P
Sbjct: 25 LIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMP---G 81
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
+ +WN++++ G +A+ +Y +M + GV+ D +T+P +++ +F +
Sbjct: 82 PNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLK--RFTRDTAVKC-- 137
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ +H+H++++GF NV + N LI +Y+ G++S + +FD+
Sbjct: 138 GRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDR------------------ 179
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
+ + VTW ++S + R + +E+M LFD M + + +
Sbjct: 180 -----------------SSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSIT 222
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ VLS C+ L ++GK +H +V E ++NALI +Y GD+ A +F ++
Sbjct: 223 LVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMK 282
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
++++SW A++T + G A F ++ + D +SW+A+I + R +
Sbjct: 283 SRDVISWTAIVTGFTNLGQVGLARNYFDKMPERD--------FVSWTAMIDGYLQVNRFK 334
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
E L LFR+MQ A + + T+ +L+ CA AL +G I ++ + + + V N L+
Sbjct: 335 EVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALI 394
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY CG +E+ +F + +D I+W ++I G +NG GE AL F +M++A PD V
Sbjct: 395 DMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEV 454
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
+ VL AC+H+G+V++G++ F M + IEP + HY CMVDLLGRAG L+EA +++KN
Sbjct: 455 TCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKN 514
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP++PN+ VWG+LL +CR+H++ ++AE A QI L E Y+LL NIYAA RWE
Sbjct: 515 MPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKL 574
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
+VR +G+KK G S IE+ +H F +G+ + K + L+E+++ ++ G
Sbjct: 575 HEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYS 634
Query: 695 PDNDIILWEM 704
PD + ++
Sbjct: 635 PDTSEVFLDI 644
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 233/730 (31%), Positives = 377/730 (51%), Gaps = 116/730 (15%)
Query: 31 LDCFDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
L+ + +LQ C K++ K+VH+ +I G + L A+++ +Y G L R +F+
Sbjct: 94 LNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFD 153
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
D LWN ++ G + ++ L+ KM+KLGV+G+ +TF V++ +G
Sbjct: 154 KIMND---KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALG- 209
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
+ + VH +VL++GF N +VN LI Y K G + + LFD++ + +SWN
Sbjct: 210 ---KVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNS 266
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS------------------------- 242
M +G +N LE+F +M + G+E + T S
Sbjct: 267 MINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKAC 326
Query: 243 ----------LLSSHARCGRLEETMDLF-------------------------------D 261
LL +++CG L ++F D
Sbjct: 327 FSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFD 386
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
M+ +G+ + ++ CA ++ G+ +H +VIK G + V NALI +Y K G
Sbjct: 387 EMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCG 446
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
V+ A+ +FS+I K+IVSWN +I Y++ L +EA+E+F ++K
Sbjct: 447 SVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK--------------- 491
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
+ + +T++ +L CA AAL+ GREIHGH++R
Sbjct: 492 -------------------------QFKPDDITMACVLPACAGLAALDKGREIHGHILRR 526
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
++ V L++MY KCG L L+F+ I KKDLI+W MI+GYGM+G G A++TF
Sbjct: 527 GYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTF 586
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
EM AG +PD +F A+L+ACSH+GL+NEG + F+ M E +EP++EHYAC+VDLL R
Sbjct: 587 NEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLAR 646
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLL 621
G L +A +++MP++P+ +WG LL+ CR+H + +AE +A IF L + T Y++L
Sbjct: 647 MGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVL 706
Query: 622 SNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVL 681
+N+YA + +WE+ K+R + +G K+ G SWIEV K ++F +GNS K + +L
Sbjct: 707 ANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLL 766
Query: 682 EELALQMENK 691
+L +QM+N+
Sbjct: 767 SKLTMQMQNE 776
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 98/211 (46%), Gaps = 4/211 (1%)
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+A I F G A++L K + ++ NS +L +CAE +L G+ +H ++
Sbjct: 65 NAKINKFCEMGDLRNAIELLTKSKSYELGLNSYC--SVLQLCAEKKSLEDGKRVHSVIIS 122
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
++ + + L+ MY+ CG L +G +F++I + WN ++S Y G +++
Sbjct: 123 NGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSL 182
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F++M + G + F VL + G V E +R+ +++ ++
Sbjct: 183 FKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLK-LGFGSNTAVVNSLIAAYF 241
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
+ G ++ A ++ + EP+ W +++N C
Sbjct: 242 KFGGVESAHNLFDELS-EPDVVSWNSMINGC 271
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/664 (32%), Positives = 375/664 (56%), Gaps = 60/664 (9%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
K+ Q KQ+H Q++ T + + L+ +LSIY+ L D+ +F + P ++L W
Sbjct: 19 KSKSQAKQLHAQILRTSLPSPSLLST-ILSIYSNLNLLHDSLLIFNSLP--SPPTTLAWK 75
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
SI+R S+GL+ ++L +++M G D FP V+++C M RF G+ VH
Sbjct: 76 SIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRF----GESVHGC 131
Query: 162 VLQMGFQGNVHIVNELIGMYAK---MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
++++G +++ N L+ MY+K + +++ K+FD+ + + S S +
Sbjct: 132 IIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYL----- 186
Query: 219 DGAL-ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
G+L ++F+ M + + V+W +++S +A+ G E+ + + M + + ++
Sbjct: 187 -GSLRKVFEMMP----KRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSS 241
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
VL + A+ GK IHG+ I+ G++ VF+ ++LI +Y K V
Sbjct: 242 VLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRV-------------- 287
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
D++ VF L + DG ISW+++I NG +E L
Sbjct: 288 -----------------DDSCRVFYMLPQHDG--------ISWNSIIAGCVQNGMFDEGL 322
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
F++M +AK+ N V+ S ++ CA L++G+++HG+++R + N+ + + L++MY
Sbjct: 323 KFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMY 382
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG + +F+++E D+++W +MI GY ++G +A++ F+ M G KP+ VAF+
Sbjct: 383 AKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFM 442
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
AVL+ACSHAGLV+E + F+ M +++RI P +EHYA + DLLGR G L+EA + + +M +
Sbjct: 443 AVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHI 502
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
EP VW TLL +CR+HKN ++AE ++ ++F + + G+Y+LLSNIY+A+GRW+DA K+
Sbjct: 503 EPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKL 562
Query: 638 RISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
RI+ + KG+KK SWIE+K K+H F +G+ + E L+ L QME +G V D
Sbjct: 563 RIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDT 622
Query: 698 DIIL 701
+L
Sbjct: 623 TEVL 626
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/627 (34%), Positives = 347/627 (55%), Gaps = 14/627 (2%)
Query: 113 YENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVH 172
+ + ++++ M G++ D P VI+ C + + + G+ +H L G +
Sbjct: 55 FGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQT----GKQMHCFALVSGLGLDSV 110
Query: 173 IVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG 232
+++ L+ MY + + D+ +FDK+ ++ + + S FA ELF + G
Sbjct: 111 VLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLG 170
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
+E N V+W ++S R G + + +F M G++ +++ VL DL MG
Sbjct: 171 VELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGI 230
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
IH +VIK G FV +ALI +YGK +F+E++E ++ + NAL+T + G
Sbjct: 231 QIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNG 290
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
L D A+EVF Q + +D NV+SW+++I + + NG+ EAL+LFR+MQ+ V NS
Sbjct: 291 LVDNALEVFKQFKGMD------LNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNS 344
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
VTI LL C AAL G+ H +R + ++ V + L++MY KCG + L F+
Sbjct: 345 VTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDM 404
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+ ++L++WNS+++GY M+G A+ FE M G KPD V+F VLSAC+ GL EG
Sbjct: 405 MPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEG 464
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
FD M R +E +MEHY+CMV LLGR+G L+EA ++K MP EP++ VWG LL+SCR
Sbjct: 465 WFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCR 524
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
+H D+ E A ++F L G+Y+LLSNIYA+ W + VR +++GLKK G
Sbjct: 525 VHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGY 584
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKR 712
SWIE+K K+HM +G+S + + E L +L ++M+ G VP D +L ++ +
Sbjct: 585 SWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDK--- 641
Query: 713 IQRIRADNIKSKHRIVGFRNLKLGLRL 739
++I + + ++G N K G L
Sbjct: 642 -EQILCGHSEKLAVVLGLLNTKPGFPL 667
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 198/402 (49%), Gaps = 45/402 (11%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD- 92
+++ C + L KQ+H +V+G + + + +L +Y +F L DARNVF+ P
Sbjct: 80 VIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPG 139
Query: 93 -CKSSSLL------------------------------WNSILRVNVSNGLYENALKLYV 121
SS+L+ WN ++ +G Y +A+ ++
Sbjct: 140 VVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQ 199
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
M G+ DG + V+ A +G G +H +V++ G + +V+ LI MY
Sbjct: 200 NMHLEGLKPDGTSVSSVLPA---VGDLDMPL-MGIQIHCYVIKQGLGPDKFVVSALIDMY 255
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
K S+ +F+++ + + N + +G + N D ALE+FK + +G++ N V+WT
Sbjct: 256 GKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFK--QFKGMDLNVVSWT 313
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
S+++S ++ G+ E ++LF M+ G++ + I +L C ++AA GK H F ++
Sbjct: 314 SMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRN 373
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
G + V+V +ALI +Y K G + ++ F + +N+VSWN+L+ YA G EA+ +F
Sbjct: 374 GIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIF 433
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+++ ++P+ +S++ V+ A G EE F M
Sbjct: 434 ELMQRCG----QKPDHVSFTCVLSACTQGGLTEEGWFYFDSM 471
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
IS I F+ + +F M +V +S + ++ CA +AL G+++H
Sbjct: 40 ISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCF 99
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK--------------------- 476
+ + + +V + LL+MY++ L++ VF+++ +
Sbjct: 100 ALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKET 159
Query: 477 --------------DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
+L++WN MISG+ +G +A+ F+ M G KPDG + +VL A
Sbjct: 160 KELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPA 219
Query: 523 CSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
+ G +I ++++ + P + ++D+ G+ E S + M
Sbjct: 220 VGDLDMPLMGIQIHCYVIKQ-GLGPDKFVVSALIDMYGKCACASEMSGVFNEM 271
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/639 (33%), Positives = 353/639 (55%), Gaps = 46/639 (7%)
Query: 69 VLSIYARFGRLFDARNVF-ETAPF-DCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL 126
++S YA+ G+ +A F E D K + + W +++ + NG AL ++ KM
Sbjct: 297 IISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356
Query: 127 GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG-FQGNVHIVNELIGMYAKMG 185
GV + T + AC + R G+ +H + +++ ++ + N L+ YAK
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRH----GREIHGYCIKVEELDSDLLVGNSLVDYYAKCR 412
Query: 186 QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
+ + + F ++ + +SWN M +G+AL + A+EL M+ +G+EP+ +TW L++
Sbjct: 413 SVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVT 472
Query: 246 SHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
+ G + ++ F M G++ I+ L+ C + +GK IHG+V++ E
Sbjct: 473 GFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIEL 532
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
V +ALI +Y ++VA VFS+L
Sbjct: 533 STGVGSALISMYSGCDSLEVA-------------------------------CSVFSELS 561
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
D V+ W+++I A A +GR ALDL R+M L+ V N+VT+ L C++
Sbjct: 562 TRD--------VVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKL 613
Query: 426 AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMI 485
AAL G+EIH ++R ++ + N L++MY +CG +++ +F+ + ++DL++WN MI
Sbjct: 614 AALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMI 673
Query: 486 SGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRI 545
S YGM+G G +A+ F++ G KP+ + F +LSACSH+GL+ EG + F MM E+ +
Sbjct: 674 SVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAM 733
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMAS 605
+P +E YACMVDLL RAG E + ++ MP EPNA VWG+LL +CR+H N D+AE A
Sbjct: 734 DPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAAR 793
Query: 606 QIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFS 665
+F L +++G+Y+L++NIY+A+GRWEDAAK+R K +G+ K G SWIEVKRK+H F
Sbjct: 794 YLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFV 853
Query: 666 SGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G++ ++ + +E L ++ G VPD + +L ++
Sbjct: 854 VGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDV 892
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 176/611 (28%), Positives = 318/611 (52%), Gaps = 53/611 (8%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLF 80
+T + ++ + +LQ+C+ ++ L+ QVH QL+V G + FL +R+L +Y + G +
Sbjct: 82 LTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVE 141
Query: 81 DARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR 140
DAR +F+ + + W +I+ + G YE +KL+ M GV D F FP V +
Sbjct: 142 DARRMFDKMS---ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFK 198
Query: 141 ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
AC + ++R G+ V++++L +GF+GN + ++ M+ K G+M + + F+++ K
Sbjct: 199 ACSELKNYRV----GKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK 254
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE------ 254
+ WN+M SG+ + AL+ M+L G++P+ VTW +++S +A+ G+ E
Sbjct: 255 DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYF 314
Query: 255 ------------------------------ETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
E + +F M G++ + IA +S C +
Sbjct: 315 LEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTN 374
Query: 285 LAADHMGKVIHGFVIK-GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
L+ G+ IHG+ IK + + V N+L+ Y K V+VA+ F I++ ++VSWNA
Sbjct: 375 LSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNA 434
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
++ YA G +EA+E+ S++ K G P++I+W+ ++ F G G+ AL+ F++M
Sbjct: 435 MLAGYALRGSHEEAIELLSEM-KFQG---IEPDIITWNGLVTGFTQYGDGKAALEFFQRM 490
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
+ N+ TISG L+ C + L +G+EIHG+V+R + + V + L++MY C L
Sbjct: 491 HSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSL 550
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
E VF ++ +D++ WNS+IS +G NAL EM + + + V V+ L AC
Sbjct: 551 EVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPAC 610
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
S + +G+ I ++R ++ ++D+ GR G +Q++ I MP + +
Sbjct: 611 SKLAALRQGKEIHQFIIR-CGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVS 668
Query: 584 WGTLLNSCRMH 594
W +++ MH
Sbjct: 669 WNVMISVYGMH 679
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 117/512 (22%), Positives = 216/512 (42%), Gaps = 96/512 (18%)
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
E A +L C L +G +H ++ G + F+ + L+ VY + G V+ A+ +F +
Sbjct: 90 EIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDK 149
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ E+N+ SW A++ Y GL G
Sbjct: 150 MSERNVFSWTAIMEMY--CGL-------------------------------------GD 170
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
EE + LF M V + + C+E +G++++ +++ + N V+
Sbjct: 171 YEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGS 230
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
+L+M++KCG ++ FE+IE KD+ WN M+SGY G + AL +M +G KPD
Sbjct: 231 ILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPD 290
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMM--VREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
V + A++S + +G E + F M +++F+ P + + ++ + G EA
Sbjct: 291 QVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFK--PNVVSWTALIAGSEQNGYDFEALS 348
Query: 571 IVKNMPME---PNAYVWGTLLNSCRMHKNTDVAEAMASQIFG--LITETTGSYMLLSNI- 624
+ + M +E PN+ + +++C N + +I G + E S +L+ N
Sbjct: 349 VFRKMVLEGVKPNSITIASAVSAC---TNLSLLRH-GREIHGYCIKVEELDSDLLVGNSL 404
Query: 625 --YAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLE 682
Y A R + A+ + +K+ SW + +G +L+ + E+L
Sbjct: 405 VDYYAKCRSVEVARRKFGM----IKQTDLVSW-------NAMLAGYALRGSHEEAIELLS 453
Query: 683 ELALQMENKGCVPDNDIILWEMM---------GKKNVKRIQRIRADNIKSKHRIVG---- 729
E+ Q G P DII W + GK ++ QR+ + + +
Sbjct: 454 EMKFQ----GIEP--DIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALA 507
Query: 730 ----FRNLKLGLRLLLSLRSTNGQLMKNKLKL 757
RNLKLG + +G +++N ++L
Sbjct: 508 ACGQVRNLKLG-------KEIHGYVLRNHIEL 532
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 112/254 (44%), Gaps = 5/254 (1%)
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
G+ NG A L M L + +L C + L +G ++H +V ++
Sbjct: 62 GSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVD 121
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
+ + LL +Y + GC+E+ +F+++ ++++ +W +++ Y G E + F M
Sbjct: 122 VCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLM 181
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+ G +PD F V ACS G+ ++D M+ E ++D+ + G
Sbjct: 182 VNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYML-SIGFEGNSCVKGSILDMFIKCGR 240
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMAS--QIFGLITETTGSYMLLS 622
+ A + + + + ++W +++ A S ++ G+ + ++S
Sbjct: 241 MDIARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIIS 299
Query: 623 NIYAASGRWEDAAK 636
YA SG++E+A+K
Sbjct: 300 G-YAQSGQFEEASK 312
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/739 (31%), Positives = 376/739 (50%), Gaps = 113/739 (15%)
Query: 20 PFSIITYNNSLLDCFDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARF 76
P NN L HLL+ C K++ + K++H + +NA + + ++ +Y
Sbjct: 2 PLRXEVKNNYL-----HLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSC 56
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
++ AR +F+ P S +LWN I+R NG ++ A+ LY M LGV + +T+P
Sbjct: 57 NQVVLARRLFDEIP---NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYP 113
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
V++AC S G +H+H G + +V + L+ YAK G + ++ +LF
Sbjct: 114 FVLKAC----SGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSS 169
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
+ ++ ++WN M +G +L CD A++L +M+ EG+ PN
Sbjct: 170 MSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPN-------------------- 209
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
+ I VL + A GK +HG+ ++ F++ V V L+ +
Sbjct: 210 ---------------SSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDM 254
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG------- 369
Y K + A+ +F + +N VSW+A+I Y + EA+E+F Q+ D
Sbjct: 255 YAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVT 314
Query: 370 -GSMERP------------------------NVISWSAVIGAFASNGRGEEALDLFRKM- 403
GS+ R +++ + ++ +A G ++A+ F M
Sbjct: 315 LGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMN 374
Query: 404 ------------------------------QLAKVVANSVTISGLLSVCAESAALNIGRE 433
QL+ + + T+ G+L C+ AAL G
Sbjct: 375 PKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFC 434
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
HG+++ + L+ N L++MY KCG + VF ++++ D+++WN+MI GYG++GL
Sbjct: 435 SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGL 494
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
G AL F +++ G KPD + F+ +LS+CSH+GLV EGR FD M R+F I P+MEH
Sbjct: 495 GMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI 554
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
CMVD+LGRAGL+ EA ++NMP EP+ +W LL++CR+HKN ++ E ++ +I L E
Sbjct: 555 CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPE 614
Query: 614 TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSD 673
+TG+++LLSNIY+A+GRW+DAA +RI+ K GLKK+ G SWIE+ +H F G+
Sbjct: 615 STGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQ 674
Query: 674 LKNVCEVLEELALQMENKG 692
L + LEEL ++M+ G
Sbjct: 675 LSQINRKLEELLVEMKRLG 693
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/703 (31%), Positives = 366/703 (52%), Gaps = 65/703 (9%)
Query: 4 SLLHQPHQFSPSNPSRPFSIITYNNSLLDCFD-------HLLQQCKTIHQLKQVHNQLIV 56
+LLH H P + + I +S L F LL+ C+++ QL+QVH Q I
Sbjct: 9 TLLHHRHVKKP----KQMTTIAATSSALKSFSPPTHPLISLLETCESMDQLQQVHCQAIK 64
Query: 57 TGANASAFLAARVLSIYA--RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYE 114
G NA+ L RV++ +G AR +F+ P + + +WN+++R +
Sbjct: 65 KGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIP---EPNLFIWNTMIRGYSRLDFPQ 121
Query: 115 NALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR-FRFSFGQIVHNHVLQMGFQGNVHI 173
+ LY++M + GV D +TFP + F G R +G+ +H HVL+ G Q NV +
Sbjct: 122 LGVSLYLEMLRRGVKPDRYTFPFL-----FKGFTRDIALEYGRQLHGHVLKHGLQYNVFV 176
Query: 174 VNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL 233
L+ MY GQ+ + +FD + I+WNM
Sbjct: 177 HTALVQMYLLCGQLDTARGVFDVCPKADVITWNM-------------------------- 210
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
++S++ + G+ EE+ LF +M + + + +VLS C+ L GK
Sbjct: 211 ---------IISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKK 261
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
+H +V E + ++NA+I +Y G++ A +F + ++I+SW +++ + G
Sbjct: 262 VHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGE 321
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
D A F ++ + D +SW+A+I + + R +EAL+LFR MQ V +
Sbjct: 322 IDVARNYFDKMPEKD--------YVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEF 373
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
T+ +L+ CA AL +G I ++ R + ++ V+N L++MY KCG +++ +F ++
Sbjct: 374 TMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREM 433
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
++D TW +MI G +NG GE AL F M++A PD + ++ VLSAC+H GLV++GR
Sbjct: 434 SQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGR 493
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRM 593
+ F M + IEP + HY C+VDLL RAG L+EA ++++NMP++ N+ VWG LL CR+
Sbjct: 494 KYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRV 553
Query: 594 HKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
++ +D+AE + QI L + Y+LL NIYAA RW D ++R KG+KK G S
Sbjct: 554 YRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCS 613
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
IE+ ++H F +G+ KN+ L+++ ++ G PD
Sbjct: 614 LIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPD 656
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/689 (32%), Positives = 384/689 (55%), Gaps = 36/689 (5%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS +A+ G L AR VF+ P + S+ W +++ GL+++A+ +++M G+
Sbjct: 85 ILSAHAKAGNLDSARRVFDEIP---QPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGI 141
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
FTF V+ +C + G+ VH+ V+++G G V + N L+ MYAK G
Sbjct: 142 SPTQFTFTNVLASCAAAQAL----DVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSV 197
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ +FD++R+K+ +WN M S D AL LF +M +P+ V+W S+++ +
Sbjct: 198 MAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMT----DPDIVSWNSIITGYC 253
Query: 249 RCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
G ++ F M++ ++ + VLS CA+ + +GK IH +++ +
Sbjct: 254 HQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAG 313
Query: 308 FVKNALICVYGKHGDVKVAQNL--FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
V NALI +Y K G V+VA + + N++++ +L+ Y + G D A +F L+
Sbjct: 314 AVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLK 373
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
D V++W+A+I +A NG +AL LFR M N+ T++ +LSV +
Sbjct: 374 HRD--------VVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSL 425
Query: 426 AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI-EKKDLITWNSM 484
A+L+ G+++H +R+ ++ V N L+ MY + G +++ +F I +D +TW SM
Sbjct: 426 ASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSM 485
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I +GLG A+ FE+M+ KPD + +V VLSAC+H GLV +G+ F++M
Sbjct: 486 ILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHN 545
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
IEP HYACM+DLLGRAGLL+EA + ++NMP+EP+ WG+LL+SCR+HK D+A+ A
Sbjct: 546 IEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAA 605
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
++ + +G+Y+ L+N +A G+WEDAAKVR S K K +KK G SW+++K K+H+F
Sbjct: 606 EKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIF 665
Query: 665 SSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSK 724
++L + ++ ++ +++ G +PD + +L ++ ++ VK Q +R + K
Sbjct: 666 GVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDL--EQEVKE-QILRHHSEK-- 720
Query: 725 HRIVGFRNLKLGLRLLLSLRSTNGQLMKN 753
L + L+ + + T ++MKN
Sbjct: 721 --------LAIAFALINTPKHTTVRIMKN 741
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 227/476 (47%), Gaps = 48/476 (10%)
Query: 154 FGQIVHNHVLQMGFQG-NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H +++ G + V + N L+ +Y K G SD+ +LFD++ +K SWN + S
Sbjct: 30 IGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAH 89
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
A + D A +F + +P+ V+WT+++ + G + + F M GI
Sbjct: 90 AKAGNLDSARRVFDEIP----QPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQ 145
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
VL+ CA A +GK +H FV+K G V V N+L+ +Y K GD +A+ +F
Sbjct: 146 FTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDR 205
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ K+ +WN +I+ + + D A+ +F Q M P+++SW+++I + G
Sbjct: 206 MRLKDTSTWNTMISMHMQFCQFDLALALFDQ--------MTDPDIVSWNSIITGYCHQGY 257
Query: 393 GEEALDLFRKM-QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
AL+ F M + + + + T+ +LS CA +L +G++IH H+VR ++ V N
Sbjct: 258 DIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGN 317
Query: 452 GLLNMYMKCGCLEEGH---------------------------------LVFEQIEKKDL 478
L++MY K G +E H +F+ ++ +D+
Sbjct: 318 ALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDV 377
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
+ W +MI GY NGL +AL F MI G KP+ AVLS S ++ G+++ +
Sbjct: 378 VAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAV 437
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+R + A ++ + R+G +++A I ++ + W +++ S H
Sbjct: 438 AIRLEEVSSVSVGNA-LITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQH 492
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 188/406 (46%), Gaps = 47/406 (11%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET-- 88
F ++L C L K+VH+ ++ G + +A +L++YA+ G A+ VF+
Sbjct: 148 FTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMR 207
Query: 89 ------------------------APFDCKSSS--LLWNSILRVNVSNGLYENALKLYVK 122
A FD + + WNSI+ G AL+ +
Sbjct: 208 LKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSF 267
Query: 123 MRKLGVL-GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
M K L D FT V+ AC + R G+ +H H+++ + N LI MY
Sbjct: 268 MLKSSSLKPDKFTLGSVLSAC----ANRESLKLGKQIHAHIVRADVDIAGAVGNALISMY 323
Query: 182 AKMGQMSDSFKLFDKVRVK--NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
AK G + + ++ + N I++ + G+ D D A +F ++ + V
Sbjct: 324 AKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLK----HRDVVA 379
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
WT+++ +A+ G + + + LF +M + G + +A VLSV + LA+ GK +H I
Sbjct: 380 WTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAI 439
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI-EEKNIVSWNALITSYAEAGLCDEAV 358
+ V V NALI +Y + G +K A+ +F+ I ++ ++W ++I S A+ GL +EA+
Sbjct: 440 RLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAI 499
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
E+F ++ +++ +P+ I++ V+ A G E+ F M+
Sbjct: 500 ELFEKMLRIN----LKPDHITYVGVLSACTHVGLVEQGKSYFNLMK 541
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 110/253 (43%), Gaps = 25/253 (9%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
NN L ++ ++ KQ+H I +S + ++++Y+R G + DAR +F
Sbjct: 411 NNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIF 470
Query: 87 ETAPFDCK-SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
C +L W S++ +GL A++L+ KM ++ + D T+ V+ AC +
Sbjct: 471 NHI---CSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHV 527
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM-------GQMSDSFKLFDKVR 198
G +V NVH + YA M G + +++ +
Sbjct: 528 G----------LVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMP 577
Query: 199 VK-NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV-TWTSLLSSHARCGRLEET 256
++ + ++W + S ++ D A +++ L ++PN + +L ++ + CG+ E+
Sbjct: 578 IEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLL--IDPNNSGAYLALANTLSACGKWEDA 635
Query: 257 MDLFDMMRKRGIE 269
+ M+ + ++
Sbjct: 636 AKVRKSMKDKAVK 648
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 221/633 (34%), Positives = 339/633 (53%), Gaps = 97/633 (15%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS YA+ G + DAR VF+ P + + + WN++L V N E A L+
Sbjct: 158 ILSGYAQNGCVDDARRVFDRMP---EKNDVSWNALLSAYVQNSKLEEACVLF-------- 206
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
G + LV C L+G + K ++
Sbjct: 207 -GSRENWALVSWNC----------------------------------LLGGFVKKKKIV 231
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
++ + FD ++V++ +SWN + +G+A N + D A +LF + + TWT+++S +
Sbjct: 232 EARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVH----DVFTWTAMVSGYI 287
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ +EE +LFD M +R EV
Sbjct: 288 QNRMVEEARELFDRMPERN-EVSW------------------------------------ 310
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
NA++ Y + V++A+ LF + +N+ +WN +IT YA+ G EA +F ++ K D
Sbjct: 311 --NAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD 368
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
+SW+A+I ++ +G EAL LF M+ N + S LS CA+ AL
Sbjct: 369 --------PVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVAL 420
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+G+++HG +V+ V N LL MY KCG +EE + +F+++ KD+++WN+MI+GY
Sbjct: 421 ELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 480
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
+G GE AL FE M G KPD VAVLSACSH GLV++GR+ F M +++ + P
Sbjct: 481 SRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPN 540
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
+HYACMVDLLGRAGLL+EA +++KNMP EP+A +WGTLL + R+H NT++AE A +IF
Sbjct: 541 SQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIF 600
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
+ E +G Y+LLSN+YA+SGRW D K+R+ + KG+KKV G SWIE++ K H FS G+
Sbjct: 601 AMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGD 660
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ + LE+L L+M+ G V ++L
Sbjct: 661 EFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVL 693
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 207/426 (48%), Gaps = 42/426 (9%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N +I Y + G+ + LFD++ ++ +SWN+M G+ N + A ELF+RM E
Sbjct: 94 NAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMP----E 149
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
+ +W ++LS +A+ G +++ +FD M ++ +V A+ LS A K+
Sbjct: 150 RDVCSWNTILSGYAQNGCVDDARRVFDRMPEKN-DVSWNAL---LS-----AYVQNSKLE 200
Query: 295 HGFVIKGGFEDYVFVK-NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
V+ G E++ V N L+ + K + A+ F ++ +++VSWN +IT YA+ G
Sbjct: 201 EACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGE 260
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
DEA ++F + D V +W+A++ + N EEA +LF +M N V
Sbjct: 261 IDEARQLFDESPVHD--------VFTWTAMVSGYIQNRMVEEARELFDRMP----ERNEV 308
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
+ + +L+ + + + +E+ V +N+ N ++ Y +CG + E +F+++
Sbjct: 309 SWNAMLAGYVQGERVEMAKEL----FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKM 364
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
K+D ++W +MI+GY +G AL F M G + + +F + LS C+ + G+
Sbjct: 365 PKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGK 424
Query: 534 RIFDMMVREFRIEPQMEHYACMVD-----LLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
++ +V+ C V + + G ++EA+D+ K M + + W T++
Sbjct: 425 QLHGRLVK------GGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMI 477
Query: 589 NSCRMH 594
H
Sbjct: 478 AGYSRH 483
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/532 (23%), Positives = 214/532 (40%), Gaps = 131/532 (24%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y R L AR +FE P + WN+IL NG ++A +++ +M + +
Sbjct: 131 YVRNRNLGKARELFERMP---ERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKNDVSWN 187
Query: 133 FTFPLVIR------ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIV------------ 174
++ AC GS R ++ + N +L GF IV
Sbjct: 188 ALLSAYVQNSKLEEACVLFGS---RENWALVSWNCLLG-GFVKKKKIVEARQFFDSMKVR 243
Query: 175 -----NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM- 228
N +I YA+ G++ ++ +LFD+ V + +W M SG+ N + A ELF RM
Sbjct: 244 DVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRMP 303
Query: 229 ------------------------ELEGLEP--NFVTWTSLLSSHARCGRLEETMDLFDM 262
EL + P N TW ++++ +A+CG++ E +LFD
Sbjct: 304 ERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDK 363
Query: 263 MRKR-------------------------------GIEVGAEAIAVVLSVCADLAADHMG 291
M KR G + + + LS CAD+ A +G
Sbjct: 364 MPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELG 423
Query: 292 KVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEA 351
K +HG ++KGG+E FV NAL+ +Y K G ++ A +LF E+ K+IVSWN +I Y+
Sbjct: 424 KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRH 483
Query: 352 GLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVAN 411
G +EA L F M+ + +
Sbjct: 484 GFGEEA---------------------------------------LRFFESMKREGLKPD 504
Query: 412 SVTISGLLSVCAESAALNIGRE-IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
T+ +LS C+ + ++ GR+ H + N ++++ + G LEE H +
Sbjct: 505 DATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLM 564
Query: 471 EQIE-KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
+ + + D W +++ ++G E A +++ +P+ +LS
Sbjct: 565 KNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIF--AMEPENSGMYVLLS 614
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 129/281 (45%), Gaps = 49/281 (17%)
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
+ +I WN I+SY G C EA+ VF + M R + +S++A+I + NG E
Sbjct: 56 DSDIKEWNVAISSYMRTGRCSEALRVFKR--------MPRWSSVSYNAMISGYLRNGEFE 107
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
A LF +M +V+ +V I G + + L RE+ + +++ N +L
Sbjct: 108 LARMLFDEMPERDLVSWNVMIKGYV----RNRNLGKARELFERMP----ERDVCSWNTIL 159
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF------------- 501
+ Y + GC+++ VF+++ +K+ ++WN+++S Y N E A F
Sbjct: 160 SGYAQNGCVDDARRVFDRMPEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNC 219
Query: 502 --------EEMIEAG--FKP----DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
++++EA F D V++ +++ + G ++E R++FD E +
Sbjct: 220 LLGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFD----ESPVHD 275
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ MV + +++EA ++ MP E N W +L
Sbjct: 276 VFT-WTAMVSGYIQNRMVEEARELFDRMP-ERNEVSWNAML 314
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
S + +I N ++ YM+ G E VF+++ + +++N+MISGY NG E A F
Sbjct: 54 SGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLF 113
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
+EM E D V++ ++ + + R +F+ M E + + ++ +
Sbjct: 114 DEMPER----DLVSWNVMIKGYVRNRNLGKARELFERMP-----ERDVCSWNTILSGYAQ 164
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
G + +A + MP E N W LL++
Sbjct: 165 NGCVDDARRVFDRMP-EKNDVSWNALLSA 192
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/643 (34%), Positives = 344/643 (53%), Gaps = 82/643 (12%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFD-ARNVFETAPFD 92
F++LL C ++ L ++H ++ G + L+ +++ D AR +F+ P
Sbjct: 32 FNYLLNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMP-- 89
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
K LWN+++R G E AL LY M G+ D +TFP V+R+C + + R
Sbjct: 90 -KRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALRE-- 146
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ VH ++++ GF +V + + L+ MY++ G+ +F ++ V+N +S
Sbjct: 147 --GKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVS-------- 196
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
WT++++ + + +E + +F M G + A
Sbjct: 197 ---------------------------WTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNA 229
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ VL CA L ++GK+IHG+ IK G + V + NALI +YGK G+V+ A++LF
Sbjct: 230 VTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLF-- 287
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
DG M N++SW+A+I A+ N
Sbjct: 288 -----------------------------------DG--MVVQNLVSWNAMIAAYEQNNA 310
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
G A+ LFR+MQ KV + +T+ ++S CA ALN GR +H V R + N+ + N
Sbjct: 311 GANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNA 370
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++MY KCG ++ VFE++ + +++W SMI +G GE+AL F M + G KP+
Sbjct: 371 LIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPN 430
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
F AV +AC H+GLV EGR+ F+ M+R++ I P +EH ACMVDLLGRAG L EA + +
Sbjct: 431 SFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFI 490
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
MP+EP+ VWG LL SCR+H N ++AE +A ++F L +T Y+L+SNIYA +GRWE
Sbjct: 491 DKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWE 550
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLK 675
DAA++R + + LKK+ G S +EV R+ H F SG+ QS L+
Sbjct: 551 DAARLRKLMEERELKKIPGHSLVEVNRRFHTFLSGSRSQSSLR 593
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/730 (31%), Positives = 376/730 (51%), Gaps = 116/730 (15%)
Query: 31 LDCFDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
L+ + +LQ C K++ K+VH+ +I G + L A+++ +Y G L R +F+
Sbjct: 369 LNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFD 428
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
D LWN ++ G + ++ L+ KM+KLGV+G+ +TF V++ +G
Sbjct: 429 KIMND---KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALG- 484
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
+ + VH +VL++GF N +VN LI Y K G + + LFD++ + +SWN
Sbjct: 485 ---KVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNS 541
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVT-------WT------------------- 241
M +G +N LE+F +M + G+E + T W
Sbjct: 542 MINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKAC 601
Query: 242 ---------SLLSSHARCGRLEETMDLFDMM----------------------------- 263
+LL +++CG L ++F M
Sbjct: 602 FSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFD 661
Query: 264 --RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
+ +G+ + ++ CA ++ G+ +H +VIK G + V NALI +Y K G
Sbjct: 662 EMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCG 721
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
V+ A+ +FS+I K+IVSWN +I Y++ L +EA+E+F ++K
Sbjct: 722 SVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK--------------- 766
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
+ + +T++ +L CA AAL+ GREIHGH++R
Sbjct: 767 -------------------------QFKPDDITMACVLPACAGLAALDKGREIHGHILRR 801
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
++ V L++MY KCG L L+F+ I KKDLI+W MI+GYGM+G G A++TF
Sbjct: 802 GYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTF 861
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
EM AG +PD +F +L+ACSH+GL+NEG + F+ M E +EP++EHYAC+VDLL R
Sbjct: 862 NEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLAR 921
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLL 621
G L +A +++MP++P+ +WG LL+ CR+H + +AE +A IF L + T Y++L
Sbjct: 922 MGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVL 981
Query: 622 SNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVL 681
+N+YA + +WE+ K+R + +G K+ G SWIEV K ++F +GNS K + +L
Sbjct: 982 ANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLL 1041
Query: 682 EELALQMENK 691
+L +QM+N+
Sbjct: 1042 RKLTMQMQNE 1051
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 204/439 (46%), Gaps = 42/439 (9%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
H ++ + + VH+ +I G ++ + ++++YA+ G + +AR VF P
Sbjct: 680 HACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV---K 736
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ WN+++ N L AL+L++ M+K D T V+ AC + + G
Sbjct: 737 DIVSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACVLPACAGLAAL----DKG 791
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ +H H+L+ G+ ++H+ L+ MYAK G + + LFD + K+ ISW +M +G+ ++
Sbjct: 792 REIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMH 851
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEA 274
+ A+ F M + G+EP+ +++ +L++ + G L E F+ MR G+E E
Sbjct: 852 GFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEH 911
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV----KVAQNLF 330
A V+ + A + ++ K + F+ + + L+ H DV KVA+++F
Sbjct: 912 YACVVDLLARMG--NLSKA-YKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIF 968
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF--- 387
E+E N + L YAEA +E ++ +++K G + P SW V G F
Sbjct: 969 -ELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKR--GFKQNPGC-SWIEVGGKFNIF 1024
Query: 388 -ASNGRGEEA--LD-LFRKMQLA-----------KVVANSVTISGLLSVCAESA----AL 428
A N + +A +D L RK+ + V+ N + + C S A
Sbjct: 1025 VAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAF 1084
Query: 429 NIGREIHGHVVRVSMNKNI 447
I G VRVS N+ +
Sbjct: 1085 GILNLPPGRTVRVSKNQRV 1103
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 113/488 (23%), Positives = 202/488 (41%), Gaps = 82/488 (16%)
Query: 233 LEPNFVTWTSLLSSH--ARCGRLEETMDLFD----MMRKRGIEVGAEAIAVVLSVCADLA 286
+ P+F T ++ + A+ + E DL + + + + E+G + VL +CA+
Sbjct: 324 VSPSFTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLNSYCSVLQLCAEKK 383
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
+ GK +H +I G + L+ +Y GD+ + +F +I + WN L++
Sbjct: 384 SLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMS 443
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
YA+ IG F E++ LF+KMQ
Sbjct: 444 EYAK---------------------------------IGNF------RESVSLFKKMQKL 464
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
VV N T + +L A + + +HG+V+++ N V N L+ Y K G +E
Sbjct: 465 GVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESA 524
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
H +F+++ + D+++WNSMI+G +NG N L F +M+ G + D V+VL A ++
Sbjct: 525 HNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANI 584
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
G ++ GR + V+ E ++ ++D+ + G L A+++ M + W +
Sbjct: 585 GNLSLGRALHGFGVKACFSE-EVVFSNTLLDMYSKCGNLNGATEVFVKMG-DTTIVSWTS 642
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
+ + V E + S GL E S + +IY T +
Sbjct: 643 TIAAY-------VREGLYSDAIGLFDEMQ-SKGVRPDIYTV---------------TSIV 679
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV---------CEVLEELALQMENKGCVPDN 697
A S ++ R +H + N + S+L C +EE L +P
Sbjct: 680 HACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSK---IPVK 736
Query: 698 DIILWEMM 705
DI+ W M
Sbjct: 737 DIVSWNTM 744
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/634 (33%), Positives = 351/634 (55%), Gaps = 23/634 (3%)
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
++A+ GRL DAR VF P + ++ W ++ G + A+K + M G
Sbjct: 1 MFAKSGRLADARGVFAEMP---ERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPT 57
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
FT V+ +C + + G+ VH+ V+++G V + N ++ MY K G +
Sbjct: 58 QFTLTNVLSSCAVTQAG----AVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETAT 113
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
+F+++ V++ SWN M S D A LF+ M + + V+W ++++ + + G
Sbjct: 114 TVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMP----DRSIVSWNAMIAGYNQNG 169
Query: 252 RLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
+ + LF M+ + + I VLS CA+L +GK +H ++++ V
Sbjct: 170 LDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVT 229
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEK--NIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
NALI Y K G V+ A+ + + E N++S+ AL+ Y + G + A E+F
Sbjct: 230 NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMF------- 282
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
G M +V++W+A+I + NGR +EA+DLFR M NS T++ +LSVCA A L
Sbjct: 283 -GVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACL 341
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI-EKKDLITWNSMISG 487
+ G++IH +R + ++ V N ++ MY + G +F+Q+ +K+ ITW SMI
Sbjct: 342 DYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVA 401
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
+G GE A+ FEEM+ AG +PD + +V VLSACSHAG VNEG+R +D + E +I P
Sbjct: 402 LAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAP 461
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
+M HYACMVDLL RAGL EA + ++ MP+EP+A WG+LL++CR+HKN ++AE A ++
Sbjct: 462 EMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKL 521
Query: 608 FGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG 667
+ +G+Y ++N+Y+A GRW DAA++ + K K ++K G SW ++ KIH+F +
Sbjct: 522 LSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGAD 581
Query: 668 NSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ + V + + +++ G VPD +L
Sbjct: 582 DVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVL 615
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 108/224 (48%), Gaps = 11/224 (4%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H + I + S+ ++ ++++YAR G AR +F+ + + ++ W S++
Sbjct: 345 KQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCW--RKETITWTSMIVAL 402
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRFSFGQIVHNHVLQMG 166
+G E A+ L+ +M + GV D T+ V+ AC G + + QI + H +
Sbjct: 403 AQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPE 462
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELF 225
+V+ L A+ G S++ + ++ V+ + I+W + S ++ + + L
Sbjct: 463 MSHYACMVDLL----ARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAE--LAEL 516
Query: 226 KRMELEGLEPNFV-TWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+L ++PN ++++ + ++ CGR + ++ +++ +
Sbjct: 517 AAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAV 560
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 236/756 (31%), Positives = 399/756 (52%), Gaps = 75/756 (9%)
Query: 6 LHQPHQFSPSNPSRPFSIITYNNSLLDCFDH----LLQQCKTIHQLKQVHNQLIVTGANA 61
L + H NP+ IT NN +H L+ QC QLKQ+H Q++ TG
Sbjct: 11 LPRSHSLPTPNPNS----ITLNNDRYFA-NHPTLSLIDQCSETKQLKQIHAQMLRTGLFF 65
Query: 62 SAFLAARVLSIYA--RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKL 119
F A+R+++ A F L A+ VF+ P + WN+++R S+ +L +
Sbjct: 66 DPFSASRLITAAALSPFPSLDYAQQVFDQIP---HPNLYTWNTLIRAYASSSNPHQSLLI 122
Query: 120 YVKM-RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
+++M + D FTFP +I+A + F+ G+ H V+++ +V I+N LI
Sbjct: 123 FLRMLHQSPDFPDKFTFPFLIKAASELEEL---FT-GKAFHGMVIKVLLGSDVFILNSLI 178
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
YAK G++ +++F + ++ +SWN
Sbjct: 179 HFYAKCGELGLGYRVFVNIPRRDVVSWN-------------------------------- 206
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
S++++ + G EE ++LF M + ++ + VLS CA + G+ +H ++
Sbjct: 207 ---SMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYI 263
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
+ + + + NA++ +Y K G V+ A+ LF ++ EK+IVSW ++ YA+ G D A
Sbjct: 264 ERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQ 323
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV-ANSVTISG 417
+F +M ++ +W+A+I A+ G+ +EAL+LF ++QL+K + VT+
Sbjct: 324 GIFD--------AMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVS 375
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
LS CA+ A+++G IH ++ + M N + L++MY KCG L++ +VF +E+KD
Sbjct: 376 TLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKD 435
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+ W++MI+G M+G G++A+A F +M E KP+ V F +L ACSH GLV EGR F+
Sbjct: 436 VFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFN 495
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNT 597
M + + P ++HYACMVD+LGRAGLL+EA ++++ MPM P A VWG LL +C +H+N
Sbjct: 496 QMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENV 555
Query: 598 DVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
+AE SQ+ L G+Y+LLSNIYA +G+W+ + +R + GLKK G S IEV
Sbjct: 556 VLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEV 615
Query: 658 KRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIR 717
+H F G++ K + L+E+ ++E G VP+ +L Q +
Sbjct: 616 DGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLL------------QLVE 663
Query: 718 ADNIKSKHRIVGFRNLKLGLRLLLSLRSTNGQLMKN 753
+++K + + L + L+ + +S +++KN
Sbjct: 664 EEDVKEQALFLHSEKLAIAFGLISTGQSQPIRIVKN 699
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/634 (33%), Positives = 340/634 (53%), Gaps = 68/634 (10%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+L+ YAR RL DAR +F++ P + + WN++L V +G + A ++ +M
Sbjct: 101 MLTGYARNRRLRDARMLFDSMP---EKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHKNS 157
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ +R+ + + R + + + N L+G Y K +
Sbjct: 158 ISWNGLLAAYVRSGRLEEARR------------LFESKSDWELISCNCLMGGYVKRNMLG 205
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
D+ +LFD++ V++ ISWN M SG+A + D A LF+ + + TWT+++ ++
Sbjct: 206 DARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVR----DVFTWTAMVYAYV 261
Query: 249 RCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
+ G L+E +FD M +KR +
Sbjct: 262 QDGMLDEARRVFDEMPQKREMSY------------------------------------- 284
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
N +I Y ++ + + + LF E+ NI SWN +I+ Y + G +A +F + +
Sbjct: 285 ---NVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQR 341
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
D +SW+A+I +A NG EEA+++ +M+ N T LS CA+ AA
Sbjct: 342 DS--------VSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAA 393
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L +G+++HG VVR K LV N L+ MY KCGC++E + VF+ ++ KD+++WN+M++G
Sbjct: 394 LELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAG 453
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
Y +G G AL FE MI AG KPD + V VLSACSH GL + G F M +++ I P
Sbjct: 454 YARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITP 513
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
+HYACM+DLLGRAG L+EA ++++NMP EP+A WG LL + R+H N ++ E A +
Sbjct: 514 NSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMV 573
Query: 608 FGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG 667
F + +G Y+LLSN+YAASGRW D +K+R+ + G++K G SW+EV+ KIH F+ G
Sbjct: 574 FKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVG 633
Query: 668 NSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ + + LEEL L+M+++G V ++L
Sbjct: 634 DCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVL 667
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 215/498 (43%), Gaps = 103/498 (20%)
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCADLAADHMGK 292
+P+ V T +S+H R G + + +FD M R + A + + LA D K
Sbjct: 30 DPHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDK 89
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+ H +D +F N ++ Y ++ ++ A+ LF + EK++VSWNA+++ Y +G
Sbjct: 90 MPH--------KD-LFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSG 140
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
DEA +VF + M N ISW+ ++ A+ +GR EEA LF
Sbjct: 141 HVDEARDVFDR--------MPHKNSISWNGLLAAYVRSGRLEEARRLF------------ 180
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
ES + + ++ N L+ Y+K L + +F+Q
Sbjct: 181 -----------ESKS----------------DWELISCNCLMGGYVKRNMLGDARQLFDQ 213
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP--DGVAFVAVLSACSHAGLVN 530
I +DLI+WN+MISGY +G A FEE P D + A++ A G+++
Sbjct: 214 IPVRDLISWNTMISGYAQDGDLSQARRLFEE------SPVRDVFTWTAMVYAYVQDGMLD 267
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
E RR+FD M ++ + Y M+ + + ++ + MP PN W +++
Sbjct: 268 EARRVFDEMPQKREMS-----YNVMIAGYAQYKRMDMGRELFEEMPF-PNIGSWNIMISG 321
Query: 591 -CRMHKNTDVAEAMASQIFGLITETTG-SYMLLSNIYAASGRWEDAAKVRISAKTKG--- 645
C +N D+A+ A +F ++ + S+ + YA +G +E+A + + K G
Sbjct: 322 YC---QNGDLAQ--ARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESL 376
Query: 646 --------LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD- 696
L A + +E+ +++H G +++ + C V L GC+ +
Sbjct: 377 NRSTFCCALSACADIAALELGKQVH----GQVVRTGYEKGCLVGNALVGMYCKCGCIDEA 432
Query: 697 ---------NDIILWEMM 705
DI+ W M
Sbjct: 433 YDVFQGVQHKDIVSWNTM 450
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
E P+ + + I NG + AL +F M L V+ + ISG L +A ++ R
Sbjct: 29 EDPHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYL----RNAKFSLAR 84
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
++ + +K++ N +L Y + L + ++F+ + +KD+++WN+M+SGY +G
Sbjct: 85 DLFDKMP----HKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSG 140
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
+ A F+ M + +++ +L+A +G + E RR+F E + + ++
Sbjct: 141 HVDEARDVFDRMPHK----NSISWNGLLAAYVRSGRLEEARRLF-----ESKSDWELISC 191
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
C++ + +L +A + +P+ + W T+++
Sbjct: 192 NCLMGGYVKRNMLGDARQLFDQIPVR-DLISWNTMIS 227
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 38 LQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCK 94
L C I L KQVH Q++ TG + ++ +Y + G + +A +VF+
Sbjct: 385 LSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQ---H 441
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+ WN++L +G AL ++ M GV D T V+ AC G
Sbjct: 442 KDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTG 493
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 237/735 (32%), Positives = 377/735 (51%), Gaps = 117/735 (15%)
Query: 31 LDCFDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
L+ + +LQ C K + + K VH+ + G L A+++ +Y G L + R +F+
Sbjct: 451 LNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFD 510
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
D K LWN ++ G Y ++ L+ KM+KLG+ G+ +TF +++ +G
Sbjct: 511 HILSDNKV--FLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLG- 567
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
R + +H V ++GF +VN LI Y K G++ + KLFD++ ++ +SWN
Sbjct: 568 ---RVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNS 624
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
M SG +N ALE F +M +
Sbjct: 625 MISGCVMNGFSHSALEFFVQMLI------------------------------------- 647
Query: 268 IEVGAEAIAVVLSV--CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
+ VG + +V SV CA++ + +G+ +HG +K F V N L+ +Y K G++
Sbjct: 648 LRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLND 707
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A F ++ +K +VSW +LI +Y GL D+A+ +F ++E G S P+V S ++V+
Sbjct: 708 AIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMES-KGVS---PDVYSMTSVLH 763
Query: 386 A-----------------------------------FASNGRGEEALDLFRKMQLAKVVA 410
A +A G EEA +F ++ + +V+
Sbjct: 764 ACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVS 823
Query: 411 ------------------------------NSVTISGLLSVCAESAALNIGREIHGHVVR 440
+ +T++ LL C AAL IGR IHG ++R
Sbjct: 824 WNTMIGGYSKNSLPNEALKLFAEMQKESRPDGITMACLLPACGSLAALEIGRGIHGCILR 883
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
+ + V N L++MY+KCG L L+F+ I +KDLITW MISG GM+GLG A+AT
Sbjct: 884 NGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIAT 943
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F++M AG KPD + F ++L ACSH+GL+NEG F+ M+ E +EP++EHYACMVDLL
Sbjct: 944 FQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLA 1003
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML 620
R G L +A ++++ MP++P+A +WG LL CR+H + ++AE +A +F L + G Y+L
Sbjct: 1004 RTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVL 1063
Query: 621 LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEV 680
L+NIYA + +WE+ K+R +GLKK G SWIEV+ K F S ++ K++ +
Sbjct: 1064 LANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSL 1123
Query: 681 LEELALQMENKGCVP 695
L L ++M+N+G P
Sbjct: 1124 LNNLRIKMKNEGHSP 1138
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 177/401 (44%), Gaps = 67/401 (16%)
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
G L ++L M +K E+ A + +L +CA+ GK++H + G +
Sbjct: 432 GDLRNAVELLRMSQKS--ELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLG 489
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKN-IVSWNALITSYAEAGLCDEAVEVFSQLEKL-- 367
L+ +Y G ++ + +F I N + WN +++ YA+ G E++ +F +++KL
Sbjct: 490 AKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGI 549
Query: 368 DGGSMERPNVISWSAVIG-----------------------------AFASNGRGEEALD 398
G S ++ A +G + +G + A
Sbjct: 550 TGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHK 609
Query: 399 LFRKMQLAKVVANSVTISGLL-------------------------------SVCAESAA 427
LF ++ VV+ + ISG + + CA +
Sbjct: 610 LFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGS 669
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L++GR +HG V+ ++ ++ N LL+MY KCG L + FE++ +K +++W S+I+
Sbjct: 670 LSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAA 729
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
Y GL ++A+ F EM G PD + +VL AC+ +++GR + + +R+ +
Sbjct: 730 YVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHN-YIRKNNMAL 788
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ ++D+ + G ++EA + +P++ + W T++
Sbjct: 789 CLPVSNALMDMYAKCGSMEEAYLVFSQIPVK-DIVSWNTMI 828
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 230/697 (32%), Positives = 375/697 (53%), Gaps = 37/697 (5%)
Query: 53 QLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGL 112
QL N A +++ Y G L R +F P + S + +N+++ NG
Sbjct: 69 QLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDS-VFYNAMITGYAHNGD 127
Query: 113 YENALKLYVKMRKLGVLGDGFTFPLVIRA-CKFMGSFRFRFSFGQIVHNHVLQMGFQG-N 170
+AL+L+ MR+ D FTF V+ A F+G+ + GQ+ H V++ G +
Sbjct: 128 GHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQ---QCGQM-HCAVVKTGMGCVS 183
Query: 171 VHIVNELIGMYAKMGQ--------MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
++N L+ +Y K M + KLFD++ ++ ++W M +G+ N D +GA
Sbjct: 184 SSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAR 243
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC 282
E+F+ M +E W +++S + CG +E + L MR GI+ ++S C
Sbjct: 244 EVFEAM----VENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISAC 299
Query: 283 ADLAADHMGKVIHGFVIKGGF-EDYVF---VKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
A++ + MGK +H +++K ++ F V NALI +Y K+ V A+ +F + +NI
Sbjct: 300 ANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNI 359
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
++WNA+++ Y AG +EA F + M N+++ + +I A NG G+E L
Sbjct: 360 ITWNAILSGYVNAGRMEEAKSFFEE--------MPVKNLLTLTVMISGLAQNGFGDEGLK 411
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
LF++M+L +G L+ C+ AL GR++H +V + ++ V N +++MY
Sbjct: 412 LFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYA 471
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
KCG +E VF + DL++WNSMI+ G +G G A+ F++M++ G PD + F+
Sbjct: 472 KCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLT 531
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
VL+ACSHAGLV +GR F+ M+ + I P +HYA MVDL RAG+ A ++ +MP +
Sbjct: 532 VLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSK 591
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
P A VW LL CR+H N D+ A Q+F L+ + G+Y+LLSNIYA GRW D AKVR
Sbjct: 592 PGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVR 651
Query: 639 ISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
+ + ++K SWIEV+ K+H+F + + ++ +V LE+L L+M+ G +PD
Sbjct: 652 KLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTK 711
Query: 699 IILWEMMGKKNVKRIQRIRADNIKSKHRIVGFRNLKL 735
+L +M + Q+ A + S+ VGF +KL
Sbjct: 712 FVLHDM------EYEQKEHALSTHSEKLAVGFGIMKL 742
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/502 (24%), Positives = 211/502 (42%), Gaps = 120/502 (23%)
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR------------- 198
FS + VH H++ GF+ H +N L+ MY K + + +LF+++
Sbjct: 29 FSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITA 88
Query: 199 --------------------VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
+++ + +N M +G+A N D ALELF+ M + P+
Sbjct: 89 YCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDF 148
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
T+TS+LS A+VL V + M H V
Sbjct: 149 TFTSVLS------------------------------ALVLFVGNEQQCGQM----HCAV 174
Query: 299 IKGGFEDY-VFVKNALICVYGKHGD--------VKVAQNLFSEIEEKNIVSWNALITSYA 349
+K G V NAL+ VY K + A+ LF E+ +++ ++W +IT Y
Sbjct: 175 VKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYV 234
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+ A EVF + + G +W+A+I + G +EAL L RKM+ +
Sbjct: 235 RNDDLNGAREVFEAMVENLGA--------AWNAMISGYVHCGCFQEALTLCRKMRFLGIQ 286
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN------------------------- 444
+ +T + ++S CA + +G+++H ++++ +N
Sbjct: 287 FDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDE 346
Query: 445 ----------KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
+NI+ N +L+ Y+ G +EE FE++ K+L+T MISG NG G
Sbjct: 347 ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFG 406
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
+ L F++M GF+P AF L+ACS G + GR++ +V E +
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLV-HLGYESSLSVGNA 465
Query: 555 MVDLLGRAGLLQEASDIVKNMP 576
M+ + + G+++ A + MP
Sbjct: 466 MISMYAKCGVVEAAESVFVTMP 487
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 168/393 (42%), Gaps = 71/393 (18%)
Query: 268 IEVGAEAIAVVLSVCA--DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
I + A A L +C+ D A+ + + +H +I GF+ N L+ +Y K +V
Sbjct: 7 IRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVY 66
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A+ LF EI + ++ LIT+Y G + E+F +G + + + ++A+I
Sbjct: 67 ARQLFEEIPNPDAIARTTLITAYCALGNLELGREIF------NGTPLYMRDSVFYNAMIT 120
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE-----IHGHVVR 440
+A NG G AL+LFR M+ + T + +LS + L +G E +H VV+
Sbjct: 121 GYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLS----ALVLFVGNEQQCGQMHCAVVK 176
Query: 441 VSMN-KNILVQNGLLNMYMK--------CGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
M + V N LL++Y+K C + +F+++ K+D +TW +MI+GY N
Sbjct: 177 TGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRN 236
Query: 492 GLGENALATFEEMIE-------------------------------AGFKPDGVAFVAVL 520
A FE M+E G + D + + ++
Sbjct: 237 DDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTII 296
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC------MVDLLGRAGLLQEASDIVKN 574
SAC++ G G+++ +++ E H C ++ L + + EA I
Sbjct: 297 SACANVGSFQMGKQMHAYILKN---ELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYA 353
Query: 575 MPMEPNAYVWGTLL----NSCRMHKNTDVAEAM 603
MP+ N W +L N+ RM + E M
Sbjct: 354 MPVR-NIITWNAILSGYVNAGRMEEAKSFFEEM 385
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 23/245 (9%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L C + L +Q+H QL+ G +S + ++S+YA+ G + A +VF T P
Sbjct: 428 FAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP 487
Query: 91 FDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF- 148
S L+ WNS++ +G A++L+ +M K GV D TF V+ AC G
Sbjct: 488 ----SVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVE 543
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNM 207
+ R F ++ ++ G ++ ++ + G S + + D + K W
Sbjct: 544 KGRHYFNSMLESY----GITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEA 599
Query: 208 MFSGFALNFDCD----GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
+ +G ++ + D A +LFK M N T+ L + +A GR + + +M
Sbjct: 600 LLAGCRIHGNMDLGIEAAEQLFKLM-----PQNDGTYVLLSNIYADVGRWNDVAKVRKLM 654
Query: 264 RKRGI 268
R + +
Sbjct: 655 RDQAV 659
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/663 (31%), Positives = 353/663 (53%), Gaps = 54/663 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA--RFGRLFDARNVFETAPFDCK 94
LL+ C+++ QL+QVH Q I G NA+ L RV++ +G AR +F+ P +
Sbjct: 24 LLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIP---E 80
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR-FRFS 153
+ +WN+++R + + LY++M + GV D +TFP + F G R
Sbjct: 81 PNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFL-----FKGFTRDIALE 135
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
+G+ +H HVL+ G Q NV + L+ MY GQ+ + +FD + I+WNM
Sbjct: 136 YGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNM------ 189
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
++S++ + G+ EE+ LF +M + +
Sbjct: 190 -----------------------------IISAYNKVGKFEESRRLFLVMEDKQVLPTTV 220
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ +VLS C+ L GK +H +V E + ++NA+I +Y G++ A +F +
Sbjct: 221 TLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 280
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
++I+SW +++ + G D A F ++ + D +SW+A+I + + R
Sbjct: 281 NNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKD--------YVSWTAMIDGYIRSNRF 332
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
+EAL+LFR MQ V + T+ +L+ CA AL +G I ++ R + ++ V+N L
Sbjct: 333 KEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNAL 392
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY KCG +++ +F ++ ++D TW +MI G +NG GE AL F M++A PD
Sbjct: 393 IDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDE 452
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
+ ++ VLSAC+H GLV++GR+ F M + IEP + HY C+VDLL RAG L+EA ++++
Sbjct: 453 ITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIE 512
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
NMP++ N+ VWG LL CR+++ +D+AE + QI L + Y+LL NIYAA RW D
Sbjct: 513 NMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWND 572
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
++R KG+KK G S IE+ ++H F +G+ KN+ L+++ ++ G
Sbjct: 573 LRELRQMMMDKGIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGY 632
Query: 694 VPD 696
PD
Sbjct: 633 SPD 635
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM--YMKCGCLEEGHLV 469
S L+S+ +++ +++H ++ +N N ++QN ++ + G + +
Sbjct: 15 SPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRL 74
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F++I + +L WN+MI GY + ++ + EM+ G KPD F + + +
Sbjct: 75 FDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIAL 134
Query: 530 NEGRRI 535
GR++
Sbjct: 135 EYGRQL 140
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/649 (32%), Positives = 350/649 (53%), Gaps = 29/649 (4%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+++ Y+ G L AR +F P D + + + +N+++ +A++L+ MR
Sbjct: 85 LITAYSALGNLKMAREIFNETPLDMRDT-VFYNAMITGYSHMNDGHSAIELFRAMRWANF 143
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ-- 186
D FTF V+ A + F GQ+ H V++ G + ++N L+ +Y K
Sbjct: 144 QPDDFTFASVLSASTLI--FYDERQCGQM-HGTVVKFGIEIFPAVLNALLSVYVKCASSP 200
Query: 187 -------MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
M+ + KLFD++ +N W + +G+ N D GA E+ M E +
Sbjct: 201 LVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMT----EQPGIA 256
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
W +++S + G E+ + LF MR G++V V+S CAD +GK +H +++
Sbjct: 257 WNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYIL 316
Query: 300 KGGF---EDYVF-VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
K D++ V N LI +Y K+G V A+ +F E+ K+I++WN L++ Y AG +
Sbjct: 317 KNELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRME 376
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
EA F+Q M N+++W+ +I A NG GE+AL LF +M+L N
Sbjct: 377 EAKSFFAQ--------MPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAF 428
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
+G ++ C+ AL GR++H +V + + + V N ++ MY +CG +E +F +
Sbjct: 429 AGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPF 488
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
D ++WNSMI+ G +G G A+ +E+M++ G PD F+ VLSACSHAGLV EG R
Sbjct: 489 VDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRY 548
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
F+ M+ + I P +HYA M+DL RAG +A +++ +MP E A +W LL CR H
Sbjct: 549 FNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHG 608
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
N D+ A ++F LI + G+Y+LLSN+YA+ GRW D A+ R + +G+KK SW
Sbjct: 609 NMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWT 668
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
EV+ K+H+F +++ ++ ++ LE+L L+M+ G +PD +L +M
Sbjct: 669 EVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPDTKYVLHDM 717
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 131/490 (26%), Positives = 228/490 (46%), Gaps = 61/490 (12%)
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
+S + VH HV+ GF+ HIVN LI +Y K + KLFD++ + I+ + +
Sbjct: 29 YSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLITA 88
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
++ + A E+F L+ + F + ++++ ++ ++LF MR +
Sbjct: 89 YSALGNLKMAREIFNETPLDMRDTVF--YNAMITGYSHMNDGHSAIELFRAMRWANFQPD 146
Query: 272 AEAIAVVLSVCADLAAD--HMGKVIHGFVIKGGFEDYVFVKNALICVYGK---------H 320
A VLS + D G+ +HG V+K G E + V NAL+ VY K
Sbjct: 147 DFTFASVLSASTLIFYDERQCGQ-MHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSS 205
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
+ A+ LF E+ ++N W LIT Y G A E+ + + G I+W
Sbjct: 206 SLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPG--------IAW 257
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+A+I + +G E+AL LFRKM+L V + T + ++S CA+ +G+++H ++++
Sbjct: 258 NAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILK 317
Query: 441 VSMN-----------------------------------KNILVQNGLLNMYMKCGCLEE 465
+N K+I+ N LL+ Y+ G +EE
Sbjct: 318 NELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEE 377
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
F Q+ +K+L+TW MISG NG GE AL F +M G++P+ AF ++ACS
Sbjct: 378 AKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSV 437
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP-MEPNAYVW 584
G + GR++ +V + + M+ + R G+++ A + MP ++P + W
Sbjct: 438 LGALENGRQLHAQIV-HLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVS--W 494
Query: 585 GTLLNSCRMH 594
+++ + H
Sbjct: 495 NSMIAALGQH 504
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 170/370 (45%), Gaps = 63/370 (17%)
Query: 279 LSVCA--DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
L++C +L++ + + +HG VI GF+ + N LI +Y K D A+ LF EI +
Sbjct: 18 LNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQP 77
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
++++ LIT+Y+ G A E+F++ ++ + + ++A+I ++ G A
Sbjct: 78 DVIARTTLITAYSALGNLKMAREIFNET------PLDMRDTVFYNAMITGYSHMNDGHSA 131
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR---EIHGHVVRVSMNKNILVQNGL 453
++LFR M+ A + T + +LS A + R ++HG VV+ + V N L
Sbjct: 132 IELFRAMRWANFQPDDFTFASVLS--ASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNAL 189
Query: 454 LNMYMKC-----------------------------------GCLEEGHL-----VFEQI 473
L++Y+KC G + G L + + +
Sbjct: 190 LSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTM 249
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
++ I WN+MISGY +GL E+AL F +M G + D + +V+SAC+ G G+
Sbjct: 250 TEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGK 309
Query: 534 RIFDMMVREFRIEPQMEHYA----CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL- 588
++ +++ + P + ++ L + G + A I MP++ + W TLL
Sbjct: 310 QVHAYILKN-ELNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVK-DIITWNTLLS 367
Query: 589 ---NSCRMHK 595
N+ RM +
Sbjct: 368 GYVNAGRMEE 377
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 110/225 (48%), Gaps = 12/225 (5%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+Q+H Q++ G +++ + ++++YAR G + AR +F T PF + WNS++
Sbjct: 445 RQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPF---VDPVSWNSMIAAL 501
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF--RFSFGQIVHNHVLQM 165
+G A++LY +M K G+L D TF V+ AC G R+ F ++ N+ +
Sbjct: 502 GQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRY-FNSMLENYGIA- 559
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMMFSGFALNFDCDGALEL 224
G H +I ++ + G+ SD+ + D + + W + +G + + D +E
Sbjct: 560 --PGEDHYA-RMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEA 616
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+++ + + + T+ L + +A GR + +MR RG++
Sbjct: 617 AEKL-FKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVK 660
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 227/699 (32%), Positives = 375/699 (53%), Gaps = 58/699 (8%)
Query: 10 HQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARV 69
H S+P P+ I+ + L +LL++CK I+ KQ+H+ +I TG N + F+ +++
Sbjct: 14 HFLPASDP--PYKILEQHPYL-----NLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKL 66
Query: 70 LSIYA--RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG 127
+ A G L A ++FE K + +WNS++R + ++L L+ +M G
Sbjct: 67 IHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYG 126
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
V + TFP + ++C + G+ +H H L++ N H+ +I MYA +G+M
Sbjct: 127 VQPNSHTFPFLFKSCTKAKATHE----GKQLHAHALKLALHFNPHVHTSVIHMYASVGEM 182
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
+ +FDK +++ +S+ + +G+ D A LF + ++ + V+W +++S +
Sbjct: 183 DFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVK----DVVSWNAMISGY 238
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
+ GR EE + F M++ + + VVLS C + +GK I +V GF
Sbjct: 239 VQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFG--- 295
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
N+ NALI Y + G D A E+F +E+
Sbjct: 296 ----------------------------SNLQLTNALIDMYCKCGETDIARELFDGIEEK 327
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
D VISW+ +IG ++ EEAL LF M + V N VT G+L CA A
Sbjct: 328 D--------VISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGA 379
Query: 428 LNIGREIHGHVVRVSMNK-NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
L++G+ +H ++ + N N + L++MY KCGC+E VF + ++L +WN+M+S
Sbjct: 380 LDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLS 439
Query: 487 GYGMNGLGENALATFEEMIEAG-FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRI 545
G+ M+G E ALA F EM+ G F+PD + FV VLSAC+ AGLV+ G + F M++++ I
Sbjct: 440 GFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGI 499
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMAS 605
P+++HY CM+DLL RA +EA ++KNM MEP+ +WG+LL++C+ H + E +A
Sbjct: 500 SPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAE 559
Query: 606 QIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFS 665
++F L E G+++LLSNIYA +GRW+D A++R KG+KKV G + IE+ +H F
Sbjct: 560 RLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFL 619
Query: 666 SGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G+ + N+ ++L E+ +E G VP+ +L++M
Sbjct: 620 VGDKFHPECNNIYKMLNEVDKLLEENGFVPNTSEVLYDM 658
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 229/697 (32%), Positives = 375/697 (53%), Gaps = 37/697 (5%)
Query: 53 QLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGL 112
QL N A +++ Y G L R +F P + S + +N+++ NG
Sbjct: 69 QLFEEIPNPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDS-VFYNAMITGYAHNGD 127
Query: 113 YENALKLYVKMRKLGVLGDGFTFPLVIRA-CKFMGSFRFRFSFGQIVHNHVLQMGFQG-N 170
+AL+L+ MR+ D FTF V+ A F+G+ + GQ+ H V++ G +
Sbjct: 128 GHSALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQ---QCGQM-HCAVVKTGMGCVS 183
Query: 171 VHIVNELIGMYAKMGQ--------MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
++N L+ +Y K M + KLFD++ ++ ++W M +G+ N D +GA
Sbjct: 184 SSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAR 243
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC 282
E+F+ M +E W +++S + CG +E + L MR GI+ ++S C
Sbjct: 244 EVFEAM----VENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISAC 299
Query: 283 ADLAADHMGKVIHGFVIKGGF-EDYVF---VKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
A++ + MGK +H +++K ++ F V NALI +Y K+ V A+ +F + +NI
Sbjct: 300 ANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNI 359
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
++WNA+++ Y AG +EA F + M N+++ + +I A NG G+E L
Sbjct: 360 ITWNAILSGYVNAGRMEEAKSFFEE--------MPVKNLLTLTVMISGLAQNGFGDEGLK 411
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
LF++M+L +G L+ C+ AL GR++H +V + ++ V N +++MY
Sbjct: 412 LFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYA 471
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
KCG +E VF + DL++WNSMI+ G +G G A+ F++M++ G PD + F+
Sbjct: 472 KCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLT 531
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
VL+ACSHAGLV +GR F+ M+ + I P +HYA MVDL RAG+ A ++ +MP +
Sbjct: 532 VLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSK 591
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
P A VW LL CR+H N D+ A Q+F L+ + G+Y+LLSNIYA GRW + AKVR
Sbjct: 592 PGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVR 651
Query: 639 ISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
+ + ++K SWIEV+ K+H+F + + ++ +V LE+L L+M+ G +PD
Sbjct: 652 KLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPDTK 711
Query: 699 IILWEMMGKKNVKRIQRIRADNIKSKHRIVGFRNLKL 735
+L +M + Q+ A + S+ VGF +KL
Sbjct: 712 FVLHDM------EYEQKEHALSTHSEKLAVGFGIMKL 742
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 122/502 (24%), Positives = 211/502 (42%), Gaps = 120/502 (23%)
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR------------- 198
FS + VH H++ GF+ H +N L+ MY K + + +LF+++
Sbjct: 29 FSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLITA 88
Query: 199 --------------------VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
+++ + +N M +G+A N D ALELF+ M + P+
Sbjct: 89 YCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDF 148
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
T+TS+LS A+VL V + M H V
Sbjct: 149 TFTSVLS------------------------------ALVLFVGNEQQCGQM----HCAV 174
Query: 299 IKGGFEDY-VFVKNALICVYGKHGD--------VKVAQNLFSEIEEKNIVSWNALITSYA 349
+K G V NAL+ VY K + A+ LF E+ +++ ++W +IT Y
Sbjct: 175 VKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYV 234
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+ A EVF + + G +W+A+I + G +EAL L RKM+ +
Sbjct: 235 RNDDLNGAREVFEAMVENLGA--------AWNAMISGYVHCGCFQEALTLCRKMRFLGIQ 286
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN------------------------- 444
+ +T + ++S CA + +G+++H ++++ +N
Sbjct: 287 FDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDE 346
Query: 445 ----------KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
+NI+ N +L+ Y+ G +EE FE++ K+L+T MISG NG G
Sbjct: 347 ARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFG 406
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
+ L F++M GF+P AF L+ACS G + GR++ +V E +
Sbjct: 407 DEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLV-HLGYESSLSVGNA 465
Query: 555 MVDLLGRAGLLQEASDIVKNMP 576
M+ + + G+++ A + MP
Sbjct: 466 MISMYAKCGVVEAAESVFVTMP 487
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 168/393 (42%), Gaps = 71/393 (18%)
Query: 268 IEVGAEAIAVVLSVCA--DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
I + A A L +C+ D A+ + + +H +I GF+ N L+ +Y K ++
Sbjct: 7 IRLLANRYAEKLQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVY 66
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A+ LF EI + ++ LIT+Y G + E+F +G + + + ++A+I
Sbjct: 67 ARQLFEEIPNPDAIARTTLITAYCALGNLELGREIF------NGTPLYMRDSVFYNAMIT 120
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE-----IHGHVVR 440
+A NG G AL+LFR M+ + T + +LS + L +G E +H VV+
Sbjct: 121 GYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLS----ALVLFVGNEQQCGQMHCAVVK 176
Query: 441 VSMN-KNILVQNGLLNMYMK--------CGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
M + V N LL++Y+K C + +F+++ K+D +TW +MI+GY N
Sbjct: 177 TGMGCVSSSVLNALLSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRN 236
Query: 492 GLGENALATFEEMIE-------------------------------AGFKPDGVAFVAVL 520
A FE M+E G + D + + ++
Sbjct: 237 DDLNGAREVFEAMVENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTII 296
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC------MVDLLGRAGLLQEASDIVKN 574
SAC++ G G+++ +++ E H C ++ L + + EA I
Sbjct: 297 SACANVGSFQMGKQVHAYILKN---ELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYA 353
Query: 575 MPMEPNAYVWGTLL----NSCRMHKNTDVAEAM 603
MP+ N W +L N+ RM + E M
Sbjct: 354 MPVR-NIITWNAILSGYVNAGRMEEAKSFFEEM 385
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 23/245 (9%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L C + L +Q+H QL+ G +S + ++S+YA+ G + A +VF T P
Sbjct: 428 FAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMP 487
Query: 91 FDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF- 148
S L+ WNS++ +G A++L+ +M K GV D TF V+ AC G
Sbjct: 488 ----SVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVE 543
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNM 207
+ R F ++ ++ G ++ ++ + G S + + D + K W
Sbjct: 544 KGRHYFNSMLESY----GITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEA 599
Query: 208 MFSGFALNFDCD----GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
+ +G ++ + D A +LFK M N T+ L + +A GR E + +M
Sbjct: 600 LLAGCRIHGNMDLGIEAAEQLFKLM-----PQNDGTYVLLSNIYADVGRWNEVAKVRKLM 654
Query: 264 RKRGI 268
R + +
Sbjct: 655 RDQAV 659
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 228/684 (33%), Positives = 368/684 (53%), Gaps = 57/684 (8%)
Query: 34 FDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C I L+ VH + G ++ F+ ++++Y R G L DA +F+
Sbjct: 130 FPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVL 189
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKM---RKLGVLGDGFTFPLVIRACKFMGS 147
+ WNSIL V G AL++ +M L + D T ++ AC +
Sbjct: 190 ERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASV-- 247
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
F G+ VH ++ G +V + N L+ MYAK +M+++ K+F+ ++ K+ +SWN
Sbjct: 248 --FALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNA 305
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
M +G++ D AL LFK M+ E ++ + +TW+++++ +A+ G E +D+F M+ G
Sbjct: 306 MVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYG 365
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF-------EDYVFVKNALICVYGKH 320
+E +A +LS CA + A GK H +VIK ED + V N LI +Y K
Sbjct: 366 LEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKC 425
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
+VA+++F IE K+ NV++W
Sbjct: 426 KSYRVARSIFDSIEGKD-------------------------------------KNVVTW 448
Query: 381 SAVIGAFASNGRGEEALDLFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREIHGHV 438
+ +IG +A +G +AL LF ++ Q + N+ T+S L CA L +GR++H +
Sbjct: 449 TVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYA 508
Query: 439 VRVSMNKNIL-VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
+R +L V N L++MY K G ++ VF+ ++ +++++W S+++GYGM+G GE A
Sbjct: 509 LRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEA 568
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
L F++M + GF DG+ F+ VL ACSH+G+V++G F MV+ F I P EHYACMVD
Sbjct: 569 LHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVD 628
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
LLGRAG L EA +++KNM MEP A VW LL++ R+H N ++ E AS++ L E GS
Sbjct: 629 LLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGS 688
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
Y LLSN+YA + RW+D A++R K G++K G SWI+ K+ F G+ + + +
Sbjct: 689 YTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDRSHPESEQI 748
Query: 678 CEVLEELALQMENKGCVPDNDIIL 701
+L +L ++++ G VP L
Sbjct: 749 YNLLLDLIKRIKDMGYVPQTSFAL 772
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 184/619 (29%), Positives = 307/619 (49%), Gaps = 78/619 (12%)
Query: 6 LHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFL 65
+H F+ S P+ P +I+ LL+QCKT+ K H Q+ V G +
Sbjct: 18 VHFYSTFTTSPPTIP--LIS-----------LLRQCKTLINAKLAHQQIFVHGFTE---M 61
Query: 66 AARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
+ + Y G +A ++ + S+ WN+++R +V GL ++ L Y +M++
Sbjct: 62 FSYAVGAYIECGASAEAVSLLQRL-IPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQR 120
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
LG L D +TFP V++AC + S R G VH V G NV I N ++ MY + G
Sbjct: 121 LGWLPDHYTFPFVLKACGEIPSLR----HGASVHAIVCANGLGSNVFICNSIVAMYGRCG 176
Query: 186 QMSDSFKLFDKV---RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
+ D+ ++FD+V ++++ +SWN S
Sbjct: 177 ALDDAHQMFDEVLERKIEDIVSWN-----------------------------------S 201
Query: 243 LLSSHARCGRLEETMDL-FDMMRKRGIEVGAEAIAVV--LSVCADLAADHMGKVIHGFVI 299
+L+++ + G+ + + F M +++ +AI +V L CA + A GK +HGF +
Sbjct: 202 ILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSV 261
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
+ G D VFV NAL+ +Y K + A +F I++K++VSWNA++T Y++ G D A+
Sbjct: 262 RNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALS 321
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
+F +++ D + +VI+WSAVI +A G G EALD+FR+MQL + N VT++ LL
Sbjct: 322 LFKMMQEED----IKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLL 377
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKN-------ILVQNGLLNMYMKCGCLEEGHLVFEQ 472
S CA AL G++ H +V++ +N N +LV NGL++MY KC +F+
Sbjct: 378 SGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDS 437
Query: 473 IEKKD--LITWNSMISGYGMNGLGENALATFEEMI--EAGFKPDGVAFVAVLSACSHAGL 528
IE KD ++TW MI GY +G +AL F ++ + KP+ L AC+ G
Sbjct: 438 IEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGE 497
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ GR++ +R + C++D+ ++G + A + NM + N W +L+
Sbjct: 498 LRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLR-NVVSWTSLM 556
Query: 589 NSCRMHKNTDVAEAMASQI 607
MH + A + Q+
Sbjct: 557 TGYGMHGRGEEALHLFDQM 575
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 195/424 (45%), Gaps = 54/424 (12%)
Query: 230 LEGLEPNFVT---WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
L+ L P+ T W +L+ + G L++T+ + M++ G VL C ++
Sbjct: 82 LQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIP 141
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK---NIVSWNA 343
+ G +H V G VF+ N+++ +YG+ G + A +F E+ E+ +IVSWN+
Sbjct: 142 SLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNS 201
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
++ +Y + G A+ + A +
Sbjct: 202 ILAAYVQGGQSRTALRI-----------------------------------AFRMGNHY 226
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
L K+ +++T+ +L CA AL G+++HG VR + ++ V N L++MY KC +
Sbjct: 227 SL-KLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKM 285
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
E + VFE I+KKD+++WN+M++GY G ++AL+ F+ M E K D + + AV++
Sbjct: 286 NEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGY 345
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL----QEASDIVKNM---- 575
+ G E +F M + + +EP + A ++ G L Q + ++KN+
Sbjct: 346 AQKGHGFEALDVFRQM-QLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLN 404
Query: 576 --PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
E + V L++ K+ VA ++ I G + ++ ++ YA G D
Sbjct: 405 WNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGK-DKNVVTWTVMIGGYAQHGEAND 463
Query: 634 AAKV 637
A K+
Sbjct: 464 ALKL 467
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 218/679 (32%), Positives = 350/679 (51%), Gaps = 109/679 (16%)
Query: 92 DCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR 151
D ++++++W + V NG + AL+LY +M++ G+ D F VI+AC +
Sbjct: 80 DIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQA- 138
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
G+ VH ++ GF+ +V + L MY K G + ++ ++FD++ ++ +SWN + +G
Sbjct: 139 ---GRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAG 195
Query: 212 FALNFDCDGALELFKRMEL-----------------------------------EGLEPN 236
++ N AL LF M++ G+E +
Sbjct: 196 YSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESD 255
Query: 237 FVTWTSLLSSHARCGRL-------------------------------EETMDLFDMMRK 265
+ L++ +A+CG + E + F+ M+
Sbjct: 256 VLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQV 315
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
RGI+ + + VL CA L A G+ IHG+ I+ GFE
Sbjct: 316 RGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFES-------------------- 355
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
N V NAL+ YA+ G + A ++F + M + NV++W+A+I
Sbjct: 356 -----------NDVVGNALVNMYAKCGNVNSAYKLFER--------MPKKNVVAWNAIIS 396
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
++ +G EAL LF +MQ + +S I +L CA AL G++IHG+ +R
Sbjct: 397 GYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFES 456
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
N++V GL+++Y KCG + +FE++ ++D+++W +MI YG++G GE+ALA F +M
Sbjct: 457 NVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQ 516
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
E G K D +AF A+L+ACSHAGLV++G + F M ++ + P++EHYAC+VDLLGRAG L
Sbjct: 517 ETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHL 576
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
EA+ I+KNM +EP+A VWG LL +CR+H N ++ E A +F L + G Y+LLSNIY
Sbjct: 577 DEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIY 636
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A + RWED AK+R K KG+KK G S + V R + F G+ + + +LE L
Sbjct: 637 AEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILY 696
Query: 686 LQMENKGCVPDNDIILWEM 704
QM G VP+ ++ L ++
Sbjct: 697 EQMRKAGYVPNTNLALQDV 715
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 187/376 (49%), Gaps = 50/376 (13%)
Query: 29 SLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
S++ HLL + Q KQ+H I +G + + ++++YA+ G + A +FE
Sbjct: 226 SVMPVCAHLL----ALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFER 281
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
P +S WN+I+ N + AL + +M+ G+ + T V+ AC +
Sbjct: 282 MPIRDVAS---WNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHL--- 335
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
F GQ +H + ++ GF+ N + N L+ MYAK G ++ ++KLF+++ KN ++WN +
Sbjct: 336 -FALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAI 394
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
SG++ + AL LF M+ +G++P D F
Sbjct: 395 ISGYSQHGHPHEALALFIEMQAQGIKP----------------------DSF-------- 424
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
AI VL CA A GK IHG+ I+ GFE V V L+ +Y K G+V AQ
Sbjct: 425 -----AIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQK 479
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
LF + E+++VSW +I +Y G ++A+ +FS++++ G ++ I+++A++ A +
Sbjct: 480 LFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQE-TGTKLDH---IAFTAILTACS 535
Query: 389 SNGRGEEALDLFRKMQ 404
G ++ L F+ M+
Sbjct: 536 HAGLVDQGLQYFQCMK 551
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 166/338 (49%), Gaps = 22/338 (6%)
Query: 19 RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGR 78
+P SI S+L HL + Q +Q+H I +G ++ + ++++YA+ G
Sbjct: 319 KPNSITMV--SVLPACAHLF----ALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGN 372
Query: 79 LFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLV 138
+ A +FE P K + + WN+I+ +G AL L+++M+ G+ D F V
Sbjct: 373 VNSAYKLFERMP---KKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSV 429
Query: 139 IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR 198
+ AC G+ +H + ++ GF+ NV + L+ +YAK G ++ + KLF+++
Sbjct: 430 LPACAHF----LALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP 485
Query: 199 VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD 258
++ +SW M + ++ + AL LF +M+ G + + + +T++L++ + G +++ +
Sbjct: 486 EQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ 545
Query: 259 LFDMMRK-RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
F M+ G+ E A ++ + A H+ + +G + E V AL+
Sbjct: 546 YFQCMKSDYGLAPKLEHYACLVDLLGR--AGHLDEA-NGIIKNMSLEPDANVWGALLGAC 602
Query: 318 GKHGDVKV----AQNLFSEIEEKNIVSWNALITSYAEA 351
H ++++ A++LF E++ N + L YAEA
Sbjct: 603 RIHCNIELGEQAAKHLF-ELDPDNAGYYVLLSNIYAEA 639
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/614 (34%), Positives = 346/614 (56%), Gaps = 40/614 (6%)
Query: 116 ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVN 175
A LY M + D +T+PL+I+AC S R + VHNHVL++GF +V++ N
Sbjct: 197 AFTLYKSMLSNYLGADNYTYPLLIQAC----SIRRSEWEAKQVHNHVLKLGFDSDVYVRN 252
Query: 176 ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL----- 230
LI ++ M+D+ ++F++ V + +SWN + +G+ + + A ++ +M
Sbjct: 253 TLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIA 312
Query: 231 ----------------------EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
E LE + VTW++L++ + EE + F M K G+
Sbjct: 313 SNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGV 372
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
V LS CA+L +MGK+IH +K G E Y+ ++NALI +Y K GD+ VA+
Sbjct: 373 MVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARK 432
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
LF E +++SWN++I+ Y + L D A +F SM +V+SWS++I +A
Sbjct: 433 LFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFD--------SMPEKDVVSWSSMISGYA 484
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
N +E L LF++MQ++ + T+ ++S CA AAL G+ +H ++ R + N++
Sbjct: 485 QNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVI 544
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
+ L++MYMKCGC+E VF + +K + TWN++I G MNGL E++L F M +
Sbjct: 545 LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH 604
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
P+ + F+ VL AC H GLV+EG+ F M+ + +I+P ++HY CMVDLLGRAG LQEA
Sbjct: 605 VTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEA 664
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
+++ MPM P+ WG LL +C+ H ++++ + ++ L + G ++LLSNIYA+
Sbjct: 665 EELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASK 724
Query: 629 GRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
G+W+D ++R + K+ G S IE IH F +G+ D+ + ++L E+A+++
Sbjct: 725 GKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKL 784
Query: 689 ENKGCVPD-NDIIL 701
+ +G PD N+++L
Sbjct: 785 KLEGYTPDINEVLL 798
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 200/423 (47%), Gaps = 49/423 (11%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
W++++ N +YE A++ +V M K+GV+ D + AC + + G+++H
Sbjct: 344 WSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANL----LVVNMGKLIH 399
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+ L++G + +++ N LI MY+K G + + KLFD+ + + ISWN M SG+ D
Sbjct: 400 SLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVD 459
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
A +F M E + V+W+S++S +A+ +ET+ LF M+ G + + V+
Sbjct: 460 NAKAIFDSMP----EKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVI 515
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
S CA LAA GK +H ++ + G V + LI +Y K G V+ A +F + EK I
Sbjct: 516 SACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGIS 575
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
+WNALI A GL + ++++FS ++K PN I++ V+GA G +E
Sbjct: 576 TWNALILGLAMNGLVESSLDMFSNMKKCH----VTPNEITFMGVLGACRHMGLVDEGQHH 631
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
F M IH H ++ N+ ++++ +
Sbjct: 632 FYSM------------------------------IHDHKIQ----PNVKHYGCMVDLLGR 657
Query: 460 CGCLEEGHLVFEQIE-KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
G L+E + ++ D+ TW +++ +G E ++IE +PD F
Sbjct: 658 AGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIE--LQPDHDGFHV 715
Query: 519 VLS 521
+LS
Sbjct: 716 LLS 718
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 91/201 (45%), Gaps = 13/201 (6%)
Query: 372 MERPNVISWS----AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
M P +W A A+ A L++ M + A++ T L+ C+ +
Sbjct: 169 MRYPQANTWKMPAKASRRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRS 228
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
+++H HV+++ + ++ V+N L+N + C + + VF + D ++WNS+++G
Sbjct: 229 EWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAG 288
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
Y G E A + +M E +A +++ GLV E ++FD M +E
Sbjct: 289 YIEIGNVEEAKHIYHQMPERSI----IASNSMIVLFGMRGLVVEACKLFDEM-----LEK 339
Query: 548 QMEHYACMVDLLGRAGLLQEA 568
M ++ ++ + + +EA
Sbjct: 340 DMVTWSALIACFQQNEMYEEA 360
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 108/228 (47%), Gaps = 12/228 (5%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
+ Q K VH + G + L ++ +Y + G + A VF S+ WN++
Sbjct: 524 LEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGIST---WNAL 580
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRFSFGQIVHNHV 162
+ NGL E++L ++ M+K V + TF V+ AC+ MG + F ++H+H
Sbjct: 581 ILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHK 640
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV-KNYISWNMMFSGFALNFDCDGA 221
+ Q NV ++ + + G++ ++ +L +++ + + +W + + D +
Sbjct: 641 I----QPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMG 696
Query: 222 LELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGI 268
+ ++ L L+P+ + LLS+ +A G+ ++ +++ MM K +
Sbjct: 697 RRVGRK--LIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRV 742
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/700 (31%), Positives = 390/700 (55%), Gaps = 65/700 (9%)
Query: 10 HQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARV 69
H S+P P+ ++ + SL LL +C++I KQ+H +I TG + + F +++
Sbjct: 15 HVLPSSDP--PYRVLQEHPSL-----KLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKL 67
Query: 70 L--SIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR---VNVSNGLYENALKLYVKMR 124
+ S +R G + A ++F + + + +WNS++R +++S L AL +V+M
Sbjct: 68 IEFSAVSRSGDISYAISLFNSIE---EPNLFIWNSMIRGLSMSLSPAL---ALVFFVRMI 121
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
GV + +TFP ++++C + S G+ +H HVL++GF +V I LI MYA+
Sbjct: 122 YSGVEPNSYTFPFLLKSCAKLASAHE----GKQIHAHVLKLGFVSDVFIHTSLINMYAQS 177
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G+M+++ +FD+ ++ IS+ + +G+AL D A +LF M ++ + V+W +++
Sbjct: 178 GEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVK----DVVSWNAMI 233
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
+ +A+ GR +E + LF+ MRK + I VLS CA A +G + ++ G
Sbjct: 234 AGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLC 293
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
+ + NALI +Y K GD++ A+ LF ++ E++++SWN +I Y +C
Sbjct: 294 SNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTH--MCSY-------- 343
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
+EAL LFR+M + V +T +L CA
Sbjct: 344 -----------------------------KEALALFREMLASGVEPTEITFLSILPSCAH 374
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
A+++G+ IH ++ + + + + L+++Y KCG + VF+ ++ K L +WN+M
Sbjct: 375 LGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAM 434
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I G M+G + A F +M G +P+ + FV +LSAC HAGLV+ G++ F MV++++
Sbjct: 435 ICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYK 494
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
I P+ +HY CM+DLLGRAGL +EA +++NM ++P+ +WG+LL +CR H ++ E +A
Sbjct: 495 ISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVA 554
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
++F L + G+Y+LLSNIYA +G+W+D A++R +G+KKV G + IEV +H F
Sbjct: 555 ERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEF 614
Query: 665 SSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G+ + +++ +LEE+ Q++ G V D +L++M
Sbjct: 615 LVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDM 654
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/640 (34%), Positives = 336/640 (52%), Gaps = 80/640 (12%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+L+ Y R RL +A +F+ P K + WN++L NG + A +++ KM
Sbjct: 114 MLTGYVRNRRLGEAHKLFDLMP---KKDVVSWNAMLSGYAQNGFVDEAREVFNKM----- 165
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG-----FQGNVHIV--NELIGMY 181
S + VHN L+ Q N ++ N L+G Y
Sbjct: 166 --------------PHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGY 211
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
K + D+ +LFD++ V++ ISWN M SG+A D A LF + + TWT
Sbjct: 212 VKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIR----DVFTWT 267
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
+++S + + G ++E FD M + E+
Sbjct: 268 AMVSGYVQNGMVDEARKYFDEMPVKN-EISY----------------------------- 297
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
NA++ Y ++ + +A LF + +NI SWN +IT Y + G +A ++F
Sbjct: 298 ---------NAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLF 348
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
+ + D +SW+A+I +A NG EEAL++F +M+ +N T S LS
Sbjct: 349 DMMPQRD--------CVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALST 400
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
CA+ AAL +G+++HG VV+ V N LL MY KCG +E + VFE IE+KD+++W
Sbjct: 401 CADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSW 460
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
N+MI+GY +G G AL FE M +AG KPD + V VLSACSH+GL++ G F M R
Sbjct: 461 NTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDR 520
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
++ ++P +HY CM+DLLGRAG L+EA ++++NMP +P A WG LL + R+H NT++ E
Sbjct: 521 DYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGE 580
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI 661
A +F + + +G Y+LLSN+YAASGRW D K+R + G++KV G SW+EV+ KI
Sbjct: 581 KAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKI 640
Query: 662 HMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
H FS G+ + + LEEL L+M +G V ++L
Sbjct: 641 HTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVL 680
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 183/421 (43%), Gaps = 86/421 (20%)
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMM-RKRGIEVGAEAIAVVLSVCADLAADHMGK 292
+P+ VTW +SSH R G + + +F+ M R+ + A + + LA D K
Sbjct: 43 DPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDK 102
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+ E +F N ++ Y ++ + A LF + +K++VSWNA+++ YA+ G
Sbjct: 103 MP---------ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNG 153
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
DEA EVF++ M N ISW+ ++ A+ NGR +EA LF
Sbjct: 154 FVDEAREVFNK--------MPHRNSISWNGLLAAYVHNGRLKEARRLFESQS-------- 197
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
N ++ N L+ Y+K L + +F++
Sbjct: 198 -------------------------------NWELISWNCLMGGYVKRNMLGDARQLFDR 226
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP--DGVAFVAVLSACSHAGLVN 530
+ +D+I+WN+MISGY G A F E P D + A++S G+V+
Sbjct: 227 MPVRDVISWNTMISGYAQVGDLSQAKRLFNE------SPIRDVFTWTAMVSGYVQNGMVD 280
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE-----ASDIVKNMPMEPNAYVWG 585
E R+ FD M + I Y M+ AG +Q A ++ + MP N W
Sbjct: 281 EARKYFDEMPVKNEIS-----YNAML-----AGYVQYKKMVIAGELFEAMPCR-NISSWN 329
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTG-SYMLLSNIYAASGRWEDAAKVRISAKTK 644
T++ +N +A+ A ++F ++ + S+ + + YA +G +E+A + + K
Sbjct: 330 TMITG--YGQNGGIAQ--ARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRD 385
Query: 645 G 645
G
Sbjct: 386 G 386
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 125/280 (44%), Gaps = 61/280 (21%)
Query: 314 ICVYGKHGDVKVAQNLFS----EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
+C + + + N +S + ++ +IV+WN I+S+ G CD A+ VF+
Sbjct: 18 LCTNNYYRSKRRSTNSYSPSSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFN------- 70
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
SM R + +S++A+I + N + A DLF KM
Sbjct: 71 -SMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP------------------------- 104
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
+++ N +L Y++ L E H +F+ + KKD+++WN+M+SGY
Sbjct: 105 --------------ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYA 150
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
NG + A F +M + +++ +L+A H G + E RR+F E + ++
Sbjct: 151 QNGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRLF-----ESQSNWEL 201
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ C++ + +L +A + MP+ + W T+++
Sbjct: 202 ISWNCLMGGYVKRNMLGDARQLFDRMPVR-DVISWNTMIS 240
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 54/123 (43%), Gaps = 9/123 (7%)
Query: 27 NNSLLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
N S C L C I L KQVH Q++ G F+ +L +Y + G +A
Sbjct: 390 NRSTFSC---ALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEAN 446
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
+VFE + + WN+++ +G AL L+ M+K GV D T V+ AC
Sbjct: 447 DVFEGIE---EKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACS 503
Query: 144 FMG 146
G
Sbjct: 504 HSG 506
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 226/660 (34%), Positives = 364/660 (55%), Gaps = 58/660 (8%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+S Y R GR +A VF+ P + SS+ +N ++ + NG +E A KL+ +M +
Sbjct: 70 AISSYMRTGRCNEALRVFKRMP---RWSSVSYNGMISGYLRNGEFELARKLFDEMPER-- 124
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D ++ ++I+ G R R + G+ + ++ + +V N ++ YA+ G +
Sbjct: 125 --DLVSWNVMIK-----GYVRNR-NLGKA--RELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP------------- 235
D+ +FD++ KN +SWN + S + N + A LFK E L
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 236 --------------NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
+ V+W ++++ +A+ G+++E LFD E + + ++
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD-------ESPVQDVFTWTAM 287
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
+ + M + K + V NA++ Y + +++A+ LF + +N+ +W
Sbjct: 288 VSGYIQNRMVEEARELFDKMPERNEV-SWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW 346
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
N +IT YA+ G EA +F ++ K D +SW+A+I ++ +G EAL LF
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRD--------PVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+M+ N + S LS CA+ AL +G+++HG +V+ V N LL MY KCG
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
+EE + +F+++ KD+++WN+MI+GY +G GE AL FE M G KPD VAVLS
Sbjct: 459 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
ACSH GLV++GR+ F M +++ + P +HYACMVDLLGRAGLL++A +++KNMP EP+A
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDA 578
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISA 641
+WGTLL + R+H NT++AE A +IF + E +G Y+LLSN+YA+SGRW D K+R+
Sbjct: 579 AIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRM 638
Query: 642 KTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ KG+KKV G SWIE++ K H FS G+ + + LEEL L+M+ G V ++L
Sbjct: 639 RDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVL 698
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 199/449 (44%), Gaps = 74/449 (16%)
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNF--VTWTSLLSSHARCGRLEETMDLFDM 262
WN+ S + C+ AL +FKRM P + V++ ++S + R G E LFD
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRM------PRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
M +R + ++ + + + ++GK F I E V N ++ Y ++G
Sbjct: 121 MPERDL------VSWNVMIKGYVRNRNLGKARELFEIMP--ERDVCSWNTMLSGYAQNGC 172
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK--------LDGG---- 370
V A+++F + EKN VSWNAL+++Y + +EA +F E L GG
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 371 -----------SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG-- 417
SM +V+SW+ +I +A +G+ +EA LF + + V + +SG
Sbjct: 233 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYI 292
Query: 418 ----------LLSVCAESAALNIGREIHGHVV--RVSMNK---------NILVQNGLLNM 456
L E ++ + G+V R+ M K N+ N ++
Sbjct: 293 QNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITG 352
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y +CG + E +F+++ K+D ++W +MI+GY +G AL F +M G + + +F
Sbjct: 353 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD-----LLGRAGLLQEASDI 571
+ LS C+ + G+++ +V+ C V + + G ++EA+D+
Sbjct: 413 SSALSTCADVVALELGKQLHGRLVK------GGYETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
K M + + W T++ H +VA
Sbjct: 467 FKEMAGK-DIVSWNTMIAGYSRHGFGEVA 494
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 131/281 (46%), Gaps = 49/281 (17%)
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
+ +I WN I+SY G C+EA+ VF + M R + +S++ +I + NG E
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKR--------MPRWSSVSYNGMISGYLRNGEFE 112
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
A LF +M +V+ +V I G + + L RE+ + +++ N +L
Sbjct: 113 LARKLFDEMPERDLVSWNVMIKGYV----RNRNLGKAREL----FEIMPERDVCSWNTML 164
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF------------- 501
+ Y + GC+++ VF+++ +K+ ++WN+++S Y N E A F
Sbjct: 165 SGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNC 224
Query: 502 --------EEMIEAG--FKP----DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
++++EA F D V++ +++ + +G ++E R++FD E ++
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD----ESPVQD 280
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ MV + +++EA ++ MP E N W +L
Sbjct: 281 VFT-WTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAML 319
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 228/702 (32%), Positives = 380/702 (54%), Gaps = 62/702 (8%)
Query: 9 PHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAAR 68
P F PS+ P+ I + SL LL CKT+ L+ +H Q+I G + + + ++
Sbjct: 16 PFHFLPSSSDPPYDSIRNHPSL-----SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSK 70
Query: 69 VLS---IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
++ + F L A +VF+T + + L+WN++ R + + +ALKLYV M
Sbjct: 71 LIEFCILSPHFEGLPYAISVFKTIQ---EPNLLIWNTMFRGHALSSDPVSALKLYVCMIS 127
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
LG+L + +TFP V+++C +F+ GQ +H HVL++G ++++ LI MY + G
Sbjct: 128 LGLLPNSYTFPFVLKSCAKSKAFKE----GQQIHGHVLKLGCDLDLYVHTSLISMYVQNG 183
Query: 186 QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
++ D+ K+FDK ++ +S+ + G+A + A +LF + ++ + V+W +++S
Sbjct: 184 RLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMIS 239
Query: 246 SHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
+A G +E ++LF M K + + V+S CA + +G+ +H ++ GF
Sbjct: 240 GYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFG- 298
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
N+ NALI Y++ G + A +F +L
Sbjct: 299 ------------------------------SNLKIVNALIDLYSKCGELETACGLFERLP 328
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
D VISW+ +IG + +EAL LF++M + N VT+ +L CA
Sbjct: 329 YKD--------VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380
Query: 426 AALNIGREIHGHV---VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A++IGR IH ++ ++ N + L + L++MY KCG +E H VF I K L +WN
Sbjct: 381 GAIDIGRWIHVYIDKRLKGVTNASSL-RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 439
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
+MI G+ M+G + + F M + G +PD + FV +LSACSH+G+++ GR IF M ++
Sbjct: 440 AMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD 499
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
+++ P++EHY CM+DLLG +GL +EA +++ M MEP+ +W +LL +C+MH N ++ E+
Sbjct: 500 YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGES 559
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
A + + E GSY+LLSNIYA++GRW + AK R KG+KKV G S IE+ +H
Sbjct: 560 FAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVH 619
Query: 663 MFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
F G+ + + +LEE+ + +E G VPD +L EM
Sbjct: 620 EFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEM 661
>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
Length = 1305
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/683 (32%), Positives = 367/683 (53%), Gaps = 39/683 (5%)
Query: 50 VHNQLIVTG-ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
+H LI G N+ + + ++ Y R L A +F+ P K L WN I+ VN+
Sbjct: 546 IHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKIFDEMP---KRDDLAWNEIVMVNL 602
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+G +E A+KL+ MR G T +++ C S + F+ G+ +H +VL++GF+
Sbjct: 603 QSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVC----SNKEGFAQGRQIHGYVLRLGFE 658
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
NV + N LI MY++ G++ S K+F+ + +N SWN + S + D A+ L M
Sbjct: 659 SNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEM 718
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E GL+P+ VTW SLLS +A + + + ++ G++ +I+ +L +
Sbjct: 719 ETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLV 778
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+GK IHG+VI+ V+V+ LI +Y K G + A+ +F ++EKNIV+WN+LI+
Sbjct: 779 KLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGL 838
Query: 349 AEAGLCDEAVEVFSQLEK-------------LDG--------------GSMER----PNV 377
+ GL EA + S++EK + G G M++ PNV
Sbjct: 839 SYTGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVEPNV 898
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
+SW+A++ + NG L +F KMQ V NS TIS LL + + L G+E+H
Sbjct: 899 VSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSF 958
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
++ ++ ++ V L++MY K G L+ +F I+ K L +WN MI GY M GE
Sbjct: 959 CLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEG 1018
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
+A F M+EAG +PD + F +VLS C ++GLV EG + FD+M + + P +EH +CMV+
Sbjct: 1019 IAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIEHCSCMVE 1078
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
LLGR+G L EA D ++ MP++P+A +WG L+SC++H++ ++AE ++ L + +
Sbjct: 1079 LLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSAN 1138
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
YM++ N+Y+ RW D ++R S ++ SWI++ + +H+F + D +
Sbjct: 1139 YMMMINLYSNLNRWGDVERIRNSMSNNRVRVQDLWSWIQIDQTVHIFYAEGKAHPDEGEI 1198
Query: 678 CEVLEELALQMENKGCVPDNDII 700
L +L +M+ G +PD I
Sbjct: 1199 YFELYKLVSEMKKSGYMPDTRCI 1221
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 188/438 (42%), Gaps = 81/438 (18%)
Query: 37 LLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF------- 86
LLQ C Q +Q+H ++ G ++ + ++ +Y+R G+L +R VF
Sbjct: 632 LLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRN 691
Query: 87 -------------------------ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYV 121
E K + WNS+L S L +A+ +
Sbjct: 692 LSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLK 751
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
+++ G+ + + +++A G + G+ +H +V++ +V++ LI MY
Sbjct: 752 RIQIAGLKPNTSSISSLLQAVYEPGLVK----LGKAIHGYVIRNQLWYDVYVETTLIDMY 807
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
K G + + +FD + KN ++WN + SG + A L RME EG++ N VTW
Sbjct: 808 IKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWN 867
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD----------------- 284
SL+S +A G+ E+ + + M+K G+E + +LS C+
Sbjct: 868 SLVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNGLKIFLKMQEE 927
Query: 285 ------------------LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
L+ + GK +H F +K V AL+ +Y K GD++ A
Sbjct: 928 GVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSA 987
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+F I+ K + SWN +I YA +E + VF+ + L+ G P+ I++++V+
Sbjct: 988 AEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFNAM--LEAGI--EPDAITFTSVLSV 1043
Query: 387 FASNG---RGEEALDLFR 401
++G G + DL R
Sbjct: 1044 CKNSGLVREGWKYFDLMR 1061
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 122/508 (24%), Positives = 216/508 (42%), Gaps = 93/508 (18%)
Query: 232 GLEPNFVTWTSLLSSHARCG-RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
G N V+W L G + ++ F ++ +G+ +A+V +CA L +
Sbjct: 483 GFPRNQVSWRDFLEKAEDFGVEKYKVLEEFVRLQNKGVNFDEVVLAMVFRICAVLMYRFL 542
Query: 291 GKVIHGFVIKGGFEDY-VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
G IHG +IK G ++ V +AL+ YG+ + +A +F E+ +++ ++WN ++
Sbjct: 543 GFTIHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNL 602
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
++G +W E+A+ LFR M+ +
Sbjct: 603 QSG--------------------------NW-------------EKAVKLFRVMRFSGAK 623
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
A T+ LL VC+ GR+IHG+V+R+ N+ + N L+ MY + G LE V
Sbjct: 624 AYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKV 683
Query: 470 F-------------------------------EQIE----KKDLITWNSMISGYGMNGLG 494
F +++E K D++TWNS++SGY L
Sbjct: 684 FNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALS 743
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR-EFRIEPQMEHYA 553
+A+A + + AG KP+ + ++L A GLV G+ I ++R + + +E
Sbjct: 744 RDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVE--T 801
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL-IT 612
++D+ + G L A +V +M E N W +L++ AEA+ S++ I
Sbjct: 802 TLIDMYIKTGYLPYAR-MVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIK 860
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
++ L + YA G+ E A V K G++ SW + SG S
Sbjct: 861 SNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVEPNV-VSWTAI-------LSGCSKNG 912
Query: 673 DLKNVCEVLEELALQMENKGCVPDNDII 700
+ N ++ L+M+ +G P++ I
Sbjct: 913 NFGNGLKIF----LKMQEEGVSPNSATI 936
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
++ N++ + +L ++ K+VH+ + A +A ++ +YA+ G L A
Sbjct: 929 VSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAA 988
Query: 84 NVFETAPFDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
+F + K+ L WN ++ E + ++ M + G+ D TF V+ C
Sbjct: 989 EIF----WGIKNKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAITFTSVLSVC 1044
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-N 201
K G R + + ++ +H G + + ++ + + G + +++ + +K +
Sbjct: 1045 KNSGLVREGWKYFDLMRSHY---GVIPTIEHCSCMVELLGRSGYLDEAWDFIRTMPLKPD 1101
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEP----NFVTWTSLLSSHARCGRLE 254
W S ++ D + A +KR+++ LEP N++ +L S+ R G +E
Sbjct: 1102 ATIWGAFLSSCKIHRDLELAEIAWKRLQV--LEPHNSANYMMMINLYSNLNRWGDVE 1156
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 229/728 (31%), Positives = 370/728 (50%), Gaps = 109/728 (14%)
Query: 34 FDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++ C I L+ VH + G + ++ ++ +Y+RF L +AR VFE
Sbjct: 124 FPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMS 183
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
S+ WNS++ SNG +E+AL +Y K R G++ D FT V+ AC + + +
Sbjct: 184 ---NRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKE 240
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G VH + ++G G+V I N L+ MY K ++ ++ ++F K+ VK+
Sbjct: 241 ----GVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDS-------- 288
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIE 269
VTW +++ +A+ GR E ++ LF DM+ G
Sbjct: 289 ---------------------------VTWNTMICGYAQLGRHEASVKLFMDMID--GFV 319
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
+I + C +GK +H ++I GFE N LI +Y K GD+ AQ +
Sbjct: 320 PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEV 379
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVE---------------------VFSQLEKLD 368
F + K+ V+WN+LI Y ++G E +E +FSQL ++
Sbjct: 380 FDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADIN 439
Query: 369 GGS----------------------------------------MERPNVISWSAVIGAFA 388
G M ++ISW+ VI +
Sbjct: 440 QGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSV 499
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
+ +M+ ++ + T+ G+L +C+ A G+EIHG++ + N+
Sbjct: 500 HFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVP 559
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
+ N L+ MY KCG LE VF+ +++KD++TW ++IS +GM G G+ AL F++M +G
Sbjct: 560 IGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSG 619
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
PD VAF+A + ACSH+G+V EG R FD M ++ +EP+MEHYAC+VDLL R+GLL +A
Sbjct: 620 VLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQA 679
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
+ + +MPM+P+A +WG LL++CR NT++A+ ++ +I L ++ TG Y+L+SNIYA
Sbjct: 680 EEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATL 739
Query: 629 GRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
G+W+ VR S KTKGLKK G SWIE+++++++F +G+ V ++LE L M
Sbjct: 740 GKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLM 799
Query: 689 ENKGCVPD 696
+G V D
Sbjct: 800 AKEGYVAD 807
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/554 (26%), Positives = 264/554 (47%), Gaps = 86/554 (15%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET-APFDCKSS 96
L K QL+ VH+ +I +G + S + +++S YA+ + +VF + +P ++
Sbjct: 29 LSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP---TNN 85
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
LWNSI+R NGL+ AL Y +MR+ + D FTFP VI +C + G
Sbjct: 86 VYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARI----LDLELGC 141
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
IVH H ++MGF+ +++I N LI MY++ + ++ +F+++ ++ +SWN + SG+ N
Sbjct: 142 IVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNG 201
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
+ AL+++ + + G+ P+ T +S
Sbjct: 202 FWEDALDMYHKFRMTGMVPDCFTMSS---------------------------------- 227
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
VL C L A G +HG + K G V + N L+ +Y K ++ A+ +FS++ K
Sbjct: 228 -VLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVK 286
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
+ V+WN +I YA+ G + +V++F ++ +DG
Sbjct: 287 DSVTWNTMICGYAQLGRHEASVKLF--MDMIDG--------------------------- 317
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
V + ++I+ + C +S L +G+ +H +++ + + N L++M
Sbjct: 318 -----------FVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDM 366
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCG L VF+ + KD +TWNS+I+GY +G + L +F +M++ KPD V F
Sbjct: 367 YAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTF 425
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
V +LS S +N+GR I +++ F E ++ ++D+ + G + + + M
Sbjct: 426 VLLLSIFSQLADINQGRGIHCDVIK-FGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMS 484
Query: 577 MEPNAYVWGTLLNS 590
+ W T++ S
Sbjct: 485 AH-DIISWNTVIAS 497
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 222/670 (33%), Positives = 351/670 (52%), Gaps = 58/670 (8%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA---- 89
LL C + L +Q+H +I G L ++++ Y+ F L DA + E +
Sbjct: 106 LLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILH 165
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
PF WN ++ V NG + AL Y +M K G+ D FT+P V++AC
Sbjct: 166 PFP-------WNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKAC----GEE 214
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
FG+ VH + + ++ + N LI MY K G++ + LFDK+ ++ +SWN M
Sbjct: 215 LDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMI 274
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
S +A + A ELF M E +E N + W ++ + R G + ++L MRK G
Sbjct: 275 SVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSH 334
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
+ + A+ + L C+ + +GK IH F I+ F + VKNALI +Y + D+K A L
Sbjct: 335 LDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLL 394
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
F QL ME ++I+W+++I
Sbjct: 395 F--------------------------------QL-------MEAKSLITWNSIISGCCH 415
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR-VSMNKNIL 448
R EEA L R+M L + N VTI+ +L +CA A L G+E H ++ R ++L
Sbjct: 416 MDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLL 475
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
+ N L++MY + G + E VF+ + ++D +T+ SMI+GYGM G G+ AL FEEM
Sbjct: 476 LWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQ 535
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
KPD + +AVLSACSH+GLV +G+ +F+ M + + P +EH+ACM DL GRAGLL +A
Sbjct: 536 IKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKA 595
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
+I++NMP +P +W TL+ +CR+H+NT++ E A ++ + E G Y+L++N+YAA+
Sbjct: 596 KEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAA 655
Query: 629 GRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
G W AKVRI + G++K G +W++V F ++ ++ + +LE L + M
Sbjct: 656 GCWNKLAKVRIFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVM 715
Query: 689 ENKGCVPDND 698
+ G + D
Sbjct: 716 KEAGYISSED 725
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 121/306 (39%), Gaps = 80/306 (26%)
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
I+ +LS C D+ + G+ +HG +I GFE + + L+ Y + A +
Sbjct: 102 PISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVI---T 158
Query: 334 EEKNIV---SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
E NI+ WN LI+SY G C +A+ + Q+ K RP+ ++ +V+ A
Sbjct: 159 ENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVK----KGIRPDNFTYPSVLKA---- 210
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
C E L G+E+H + + +++V
Sbjct: 211 -------------------------------CGEELDLGFGKEVHESINASRIKWSLIVH 239
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS------------------------ 486
N L++MY KCG + +F++I ++D ++WNSMIS
Sbjct: 240 NALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIE 299
Query: 487 -----------GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
GY G + AL +M + G D VA + L ACSH G G+ I
Sbjct: 300 LNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEI 359
Query: 536 FDMMVR 541
+R
Sbjct: 360 HSFAIR 365
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 103/200 (51%), Gaps = 9/200 (4%)
Query: 397 LDLFRKMQLAKVVANSVT-------ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
LD F+ + L ++ A+S + IS LLS C + +L GR++HGH++ + ++ ++
Sbjct: 78 LDAFKTVSLIRLHASSASQDLIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPIL 137
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
L+ Y L + H++ E WN +IS Y NG + AL+ +++M++ G
Sbjct: 138 VPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGI 197
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
+PD + +VL AC + G+ + + + RI+ + + ++ + G+ G + A
Sbjct: 198 RPDNFTYPSVLKACGEELDLGFGKEVHE-SINASRIKWSLIVHNALISMYGKCGKVGIAR 256
Query: 570 DIVKNMPMEPNAYVWGTLLN 589
D+ +P E +A W ++++
Sbjct: 257 DLFDKIP-ERDAVSWNSMIS 275
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 229/728 (31%), Positives = 370/728 (50%), Gaps = 109/728 (14%)
Query: 34 FDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++ C I L+ VH + G + ++ ++ +Y+RF L +AR VFE
Sbjct: 124 FPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMS 183
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
S+ WNS++ SNG +E+AL +Y K R G++ D FT V+ AC + + +
Sbjct: 184 ---NRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKE 240
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G VH + ++G G+V I N L+ MY K ++ ++ ++F K+ VK+
Sbjct: 241 ----GVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDS-------- 288
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIE 269
VTW +++ +A+ GR E ++ LF DM+ G
Sbjct: 289 ---------------------------VTWNTMICGYAQLGRHEASVKLFMDMID--GFV 319
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
+I + C +GK +H ++I GFE N LI +Y K GD+ AQ +
Sbjct: 320 PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEV 379
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVE---------------------VFSQLEKLD 368
F + K+ V+WN+LI Y ++G E +E +FSQL ++
Sbjct: 380 FDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFSQLADIN 439
Query: 369 GGS----------------------------------------MERPNVISWSAVIGAFA 388
G M ++ISW+ VI +
Sbjct: 440 QGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSV 499
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
+ +M+ ++ + T+ G+L +C+ A G+EIHG++ + N+
Sbjct: 500 HFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVP 559
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
+ N L+ MY KCG LE VF+ +++KD++TW ++IS +GM G G+ AL F++M +G
Sbjct: 560 IGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSG 619
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
PD VAF+A + ACSH+G+V EG R FD M ++ +EP+MEHYAC+VDLL R+GLL +A
Sbjct: 620 VLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQA 679
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
+ + +MPM+P+A +WG LL++CR NT++A+ ++ +I L ++ TG Y+L+SNIYA
Sbjct: 680 EEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATL 739
Query: 629 GRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
G+W+ VR S KTKGLKK G SWIE+++++++F +G+ V ++LE L M
Sbjct: 740 GKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLM 799
Query: 689 ENKGCVPD 696
+G V D
Sbjct: 800 AKEGYVAD 807
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 145/554 (26%), Positives = 264/554 (47%), Gaps = 86/554 (15%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET-APFDCKSS 96
L K QL+ VH+ +I +G + S + +++S YA+ + +VF + +P ++
Sbjct: 29 LSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP---TNN 85
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
LWNSI+R NGL+ AL Y +MR+ + D FTFP VI +C + G
Sbjct: 86 VYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARI----LDLELGC 141
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
IVH H ++MGF+ +++I N LI MY++ + ++ +F+++ ++ +SWN + SG+ N
Sbjct: 142 IVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNG 201
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
+ AL+++ + + G+ P+ T +S
Sbjct: 202 FWEDALDMYHKFRMTGMVPDCFTMSS---------------------------------- 227
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
VL C L A G +HG + K G V + N L+ +Y K ++ A+ +FS++ K
Sbjct: 228 -VLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVK 286
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
+ V+WN +I YA+ G + +V++F ++ +DG
Sbjct: 287 DSVTWNTMICGYAQLGRHEASVKLF--MDMIDG--------------------------- 317
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
V + ++I+ + C +S L +G+ +H +++ + + N L++M
Sbjct: 318 -----------FVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDM 366
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCG L VF+ + KD +TWNS+I+GY +G + L +F +M++ KPD V F
Sbjct: 367 YAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTF 425
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
V +LS S +N+GR I +++ F E ++ ++D+ + G + + + M
Sbjct: 426 VLLLSIFSQLADINQGRGIHCDVIK-FGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMS 484
Query: 577 MEPNAYVWGTLLNS 590
+ W T++ S
Sbjct: 485 AH-DIISWNTVIAS 497
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/651 (33%), Positives = 354/651 (54%), Gaps = 25/651 (3%)
Query: 56 VTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSN-GLYE 114
+ A + F +LS+YA+ GRL DAR VF P + + W +++ V ++ G +
Sbjct: 89 IPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMP---ERDPVSW-TVMVVGLNRVGRFG 144
Query: 115 NALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIV 174
A+K+++ M G+ FT V+ +C + G+ VH+ V+++G V +
Sbjct: 145 EAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEAR----GVGRKVHSFVVKLGLSSCVPVA 200
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N ++ MY K G + +F+++ ++ SWN M S A D AL LF+ M +
Sbjct: 201 NSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMP----D 256
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE-AIAVVLSVCADLAADHMGKV 293
V+W ++++ + + G + + F M E I VLS CA+L +GK
Sbjct: 257 RTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQ 316
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE--IEEKNIVSWNALITSYAEA 351
+H ++++ V NALI +Y K G V+ A+ + + + + N++S+ AL+ Y +
Sbjct: 317 VHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKL 376
Query: 352 GLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVAN 411
G A E+F + D V++W+A+I + NG +EA++LFR M + N
Sbjct: 377 GDMKHAREMFDVMSNRD--------VVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPN 428
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
S T++ +LSVCA A L G++IH +R ++ V N ++ MY + G L VF+
Sbjct: 429 SYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFD 488
Query: 472 QIE-KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
++ +K+ +TW SMI +GLGE+A+ FEEM+ G KPD + FV VLSAC+H G V+
Sbjct: 489 RVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVD 548
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
EG+R F + + I P+M HYACMVDLL RAGL EA + ++ MP+EP+A WG+LL++
Sbjct: 549 EGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSA 608
Query: 591 CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVA 650
CR+HKN D+AE A ++ + +G+Y LSN+Y+A GRW DAAK+ K K +KK
Sbjct: 609 CRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKET 668
Query: 651 GQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
G SW + ++H+F + + L V ++ ++ G VPD +L
Sbjct: 669 GFSWTHIGNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVL 719
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 197/431 (45%), Gaps = 74/431 (17%)
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG------IEVG-------AEAI 275
E+ + N TW SLLS +A+ GRL + +F M +R + VG EAI
Sbjct: 88 EIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAI 147
Query: 276 AV------------------VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
+ VLS CA A +G+ +H FV+K G V V N+++ +Y
Sbjct: 148 KMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMY 207
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
GK GD + A+ +F + E+++ SWNA+++ A G D A+ +F +M +
Sbjct: 208 GKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFE--------NMPDRTI 259
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKM-QLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
+SW+AVI + NG +AL F +M + + + TI+ +LS CA ++IG+++H
Sbjct: 260 VSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHA 319
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLE-----------------------EGHL----- 468
+++R M V N L++MY K G +E EG++
Sbjct: 320 YILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDM 379
Query: 469 -----VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
+F+ + +D++ W +MI GY NG + A+ F MI +G +P+ AVLS C
Sbjct: 380 KHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVC 439
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
+ + G++I +R + E +V + R+G L A + +
Sbjct: 440 ASLACLEYGKQIHCKAIRSLQ-EQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVT 498
Query: 584 WGTLLNSCRMH 594
W +++ + H
Sbjct: 499 WTSMIVALAQH 509
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 162/341 (47%), Gaps = 48/341 (14%)
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV-----KVAQNLF 330
A +L C A G+ IH +K G ++ N L+ Y + A+ LF
Sbjct: 27 ARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLF 86
Query: 331 SEIE--EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
EI ++N+ +WN+L++ YA++G +A VF+++ + D +SW+ ++
Sbjct: 87 DEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDP--------VSWTVMVVGLN 138
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
GR EA+ +F M + T++ +LS CA + A +GR++H VV++ ++ +
Sbjct: 139 RVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVP 198
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS---------------------- 486
V N +LNMY KCG E VFE++ ++ + +WN+M+S
Sbjct: 199 VANSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRT 258
Query: 487 ---------GYGMNGLGENALATFEEMIE-AGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
GY NGL AL F M+ + PD +VLSAC++ G+V+ G+++
Sbjct: 259 IVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVH 318
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
++R R+ + ++ + ++G ++ A +++ M
Sbjct: 319 AYILRS-RMPYIGQVTNALISMYAKSGSVENARGVMQQAVM 358
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 112/225 (49%), Gaps = 11/225 (4%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H + I + S+ ++ ++++YAR G L AR VF+ + + ++ W S++
Sbjct: 449 KQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHW--RKETVTWTSMIVAL 506
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRFSFGQIVHNHVLQMG 166
+GL E+A+ L+ +M ++GV D TF V+ AC +G + F Q+ H G
Sbjct: 507 AQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKH----G 562
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELF 225
+ ++ + A+ G S++ + ++ V+ + I+W + S ++ + D L
Sbjct: 563 IVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNAD--LAEL 620
Query: 226 KRMELEGLEP-NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+L ++P N +++L + ++ CGR + ++ + + ++
Sbjct: 621 AAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVK 665
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 235/706 (33%), Positives = 381/706 (53%), Gaps = 57/706 (8%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F+ L K +H L+V G S F++ R++++YA G + +R F+ P
Sbjct: 122 FNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP--- 178
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG-VLGDGFTFPLVIRACKFMGSFRFRF 152
+ WNS++ V NG + A+ + ++ + + D +TFP V++AC +
Sbjct: 179 QKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD----- 233
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H ++GFQ NV + LI MY++ G + LFD + ++ SWN M SG
Sbjct: 234 --GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGL 291
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM-------------DL 259
N + AL++ M LEG++ NFVT S+L + G + M DL
Sbjct: 292 IQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL 351
Query: 260 F------DMMRKRG-IEVGAEA-----IAVVLSVCADLAADHMGK---VIHGFVIK---G 301
F +M K G +E +A I V+S + +AA HGF +K
Sbjct: 352 FVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLN 411
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK-----NIVSWNALITSYAEAGLCDE 356
GF+ + +L + + D K ++++ I + ++V NA++ YA+ GL D
Sbjct: 412 GFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDS 471
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK-VVANSVTI 415
A +VF + D VISW+ +I +A NG EA+++++ M+ K ++ N T
Sbjct: 472 AHKVFEIIPVKD--------VISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTW 523
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
+L A AL G +IHG V++ +++ ++ V L+++Y KCG L + +F Q+ +
Sbjct: 524 VSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ 583
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
+ +TWN++IS +G++G E L F EM++ G KPD V FV++LSACSH+G V EG+
Sbjct: 584 ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWC 643
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
F +M +E+ I+P ++HY CMVDLLGRAG L+ A D +K+MP++P+A +WG LL +CR+H
Sbjct: 644 FRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHG 702
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
N ++ + + ++F + ++ G Y+LLSNIYA G+WE KVR A+ +GLKK G S I
Sbjct: 703 NIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTI 762
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
EV RK+ +F +GN K + E L L +M++ G +PD +L
Sbjct: 763 EVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVL 808
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 228/691 (32%), Positives = 370/691 (53%), Gaps = 55/691 (7%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAAR---VLSIYARFGRLFDARNVFETAPFDCK 94
LQ T ++ NQ T + A+ + ++ + R G+ A +F + P +
Sbjct: 21 LQTTTTANRKPSTRNQPKTTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMP---R 77
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF-RFS 153
SS+ WN+++ +SN + A +L+ KM D ++ ++I C + R R
Sbjct: 78 RSSISWNAMISGCLSNDKFYLARQLFEKMPTR----DLVSWNVMISGCVRYRNLRAARLL 133
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
F Q+ V+ N ++ YA+ G + ++ ++FD++ KN ISWN M + +
Sbjct: 134 FDQMPERDVVSW---------NAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYV 184
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
N G +E +R+ + ++W ++ + + RL + +FD M +R EV
Sbjct: 185 QN----GRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERD-EVSWN 239
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ + +L ++ ++ VF A++ Y ++G + A+ +F +
Sbjct: 240 TMISGYAQNGELLEAQ--RLFEESPVRD-----VFTWTAMVSGYVQNGMLDEARRVFDGM 292
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS---------------------- 371
EKN VSWNA+I Y + D+A E+F + + S
Sbjct: 293 PEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFD 352
Query: 372 -MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
M + + ISW+A+I +A +G GEEAL LF +M+ N T + LS CAE AAL +
Sbjct: 353 RMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALEL 412
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
G+++HG VV+ + V N LL MY KCG +++ ++VFE IE+K++++WN+MI+GY
Sbjct: 413 GKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYAR 472
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
+G G+ AL FE M + G PD V V VLSACSH GLV++G F M +++ I +
Sbjct: 473 HGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSK 532
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL 610
HY CM+DLLGRAG L +A +++KNMP EP+A WG LL + R+H NT++ E A IF +
Sbjct: 533 HYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEM 592
Query: 611 ITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSL 670
+ +G Y+LLSN+YAASGRW D ++R+ + +G+KKV G SW+EV+ KIH F+ G+S+
Sbjct: 593 EPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSV 652
Query: 671 QSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ + LEEL L+M+ +G V ++L
Sbjct: 653 HPERDRIYTFLEELDLKMKKEGYVSSTKLVL 683
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/683 (31%), Positives = 357/683 (52%), Gaps = 38/683 (5%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
+VH L+ G L+ ++++Y + + A VF+ P LWN+I+ N+
Sbjct: 152 EVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPL---QEDFLWNTIVMANL 208
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+ +E+AL+L +M+ T +++AC G R + G+ +H +V++ G
Sbjct: 209 RSERWEDALELSRRMQSASAKATDGTIVKLLQAC---GKLR-ALNEGKQIHGYVIRFGRV 264
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
N I N ++ MY++ ++ + +FD N SWN + S +A+N +GA +LF+ M
Sbjct: 265 SNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREM 324
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E ++P+ +TW SLLS H G E + ++ G + + +I L +L
Sbjct: 325 ESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYF 384
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
++GK IHG++++ E V+V +L+ +Y K+ ++ A+ +F + KNI +WN+LI+ Y
Sbjct: 385 NLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGY 444
Query: 349 AEAGLCDEAVEVFSQLEK-------------LDGGSME------------------RPNV 377
GL D A ++ Q+++ + G SM PNV
Sbjct: 445 TYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNV 504
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
+SW+A+I N +AL F +MQ V NS TIS LL CA + L G EIH
Sbjct: 505 VSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCF 564
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
++ +I + L++MY K G L+ H VF I++K L WN M+ GY + G GE
Sbjct: 565 SMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEV 624
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
F+ M + G +PD + F A+LS C ++GLV +G + FD M ++ I P +EHY+CMVD
Sbjct: 625 FTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVD 684
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
LLG+AG L EA D + MP + +A +WG +L +CR+HK+ +AE A +F L + +
Sbjct: 685 LLGKAGFLDEALDFIHAMPQKADASIWGAVLAACRLHKDIKIAEIAARNLFRLEPYNSAN 744
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
Y+L+ NIY+ RW D +++ S G+K SWI+V++ IH+FS+ + +
Sbjct: 745 YVLMMNIYSTFERWGDVERLKESMTAMGVKIPNVWSWIQVRQTIHVFSTEGKSHPEEGEI 804
Query: 678 CEVLEELALQMENKGCVPDNDII 700
L +L +++ G VPD + +
Sbjct: 805 YFDLYQLISEIKKLGYVPDTNCV 827
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/594 (25%), Positives = 273/594 (45%), Gaps = 58/594 (9%)
Query: 9 PHQFSPSNPS------RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANAS 62
P + SPS+ S + S +++ F H L +T++ ++++H Q+I +
Sbjct: 3 PRRHSPSSVSLGTSETQIVSSPQFSSPKFSPFFHPLGGIRTLNSVRELHAQMIKMPKKGN 62
Query: 63 -AFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS-NGLYENALKLY 120
+ ++ Y FG A VF + LLWNS L S G L+++
Sbjct: 63 LVTMDGSMMRNYLEFGDFESATKVFFVG---FARNYLLWNSFLEEFASFGGDSHEILEVF 119
Query: 121 VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
++ GV D +V++ C + G VH +L+ GFQ +VH+ LI +
Sbjct: 120 KELHDKGVKFDSKALTVVLKICLAL----MELWLGMEVHACLLKRGFQVDVHLSCALINL 175
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
Y K + + ++FD+ ++ WN
Sbjct: 176 YEKCLGIDRANQVFDETPLQEDFLWN---------------------------------- 201
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
+++ ++ R R E+ ++L M+ + I +L C L A + GK IHG+VI+
Sbjct: 202 -TIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIR 260
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G + N+++ +Y ++ +++A+ +F E+ N+ SWN++I+SYA G + A ++
Sbjct: 261 FGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDL 320
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
F ++E S +P++I+W++++ G E L R +Q A +S +I+ L
Sbjct: 321 FREME----SSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQ 376
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
E N+G+EIHG+++R + ++ V L++MY+K CLE+ +VF + K++
Sbjct: 377 AVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICA 436
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WNS+ISGY GL +NA +M E G K D V + +++S S +G E + + +
Sbjct: 437 WNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVIN-RI 495
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTLLNSC 591
+ + P + + M+ + +A M E PN+ TLL +C
Sbjct: 496 KSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRAC 549
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 132/520 (25%), Positives = 218/520 (41%), Gaps = 100/520 (19%)
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKL--FDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
G + +N + ++A+M +M L D ++NY+ + D + A ++F
Sbjct: 39 GGIRTLNSVRELHAQMIKMPKKGNLVTMDGSMMRNYLEFG----------DFESATKVF- 87
Query: 227 RMELEGLEPNFVTWTSLLSSHARCG-RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
G N++ W S L A G E +++F + +G++ ++A+ VVL +C L
Sbjct: 88 ---FVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVLKICLAL 144
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+G +H ++K GF+ V + ALI +Y K + A +F E + WN ++
Sbjct: 145 MELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIV 204
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
A L E R E+AL+L R+MQ
Sbjct: 205 M----ANLRSE-----------------------------------RWEDALELSRRMQS 225
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
A A TI LL C + ALN G++IHG+V+R N + N +++MY + LE
Sbjct: 226 ASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLEL 285
Query: 466 GHLVFEQIE-----------------------------------KKDLITWNSMISGYGM 490
VF+ E K D+ITWNS++SG+ +
Sbjct: 286 ARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLL 345
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
G EN L + AGFKPD + + L A G N G+ I ++R + + +
Sbjct: 346 QGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRS---KLEYD 402
Query: 551 HYAC--MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
Y C +VD+ + L++A ++V + N W +L++ D AE + Q+
Sbjct: 403 VYVCTSLVDMYIKNDCLEKA-EVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMK 461
Query: 609 --GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
G+ + L+S Y+ SG E+A V K+ GL
Sbjct: 462 EEGIKADLVTWNSLVSG-YSMSGCSEEALAVINRIKSLGL 500
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/707 (31%), Positives = 367/707 (51%), Gaps = 61/707 (8%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C T L + +H+ + G ++ + ++S+YAR G L AR +F T P
Sbjct: 391 VLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMP--- 447
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K + WN+I+ A+KLY +M+ GV TF ++ AC ++ S
Sbjct: 448 KRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAY----S 503
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+++H +L+ G + N H+ N L+ MY + G + ++ +F+ R ++ ISWN M +G A
Sbjct: 504 DGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHA 563
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTS------------------------------- 242
+ + A +LF M+ EGLEP+ +T+ S
Sbjct: 564 QHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVN 623
Query: 243 ----LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
L++ + RCG L++ ++F +R R + + ++ AD D + +
Sbjct: 624 LGNALINMYIRCGSLQDAYEVFHSLRHRNVM----SWTAMIGGFADQGEDRKAFELFWQM 679
Query: 299 IKGGFEDYVFVKNALI--CVYGKHGD--VKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
GF+ ++++ C+ D KV ++ + E + NALI++Y+++G
Sbjct: 680 QNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSM 739
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
+A +VF ++ D ++SW+ +I +A NG G AL +MQ VV N +
Sbjct: 740 TDARKVFDKMPNRD--------IMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFS 791
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
+L+ C+ +AL G+ +H +V+ M ++ V L++MY KCG LEE VF+
Sbjct: 792 FVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFT 851
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
+K+++TWN+MI+ Y +GL AL F M + G KPDG F ++LSAC+H+GLV EG R
Sbjct: 852 EKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNR 911
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
IF + + + P +EHY C+V LLGRAG QEA ++ MP P+A VW TLL +CR+H
Sbjct: 912 IFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIH 971
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
N +AE A+ L Y+LLSN+YAA+GRW+D AK+R + +G++K G+SW
Sbjct: 972 GNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSW 1031
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
IEV IH F + + + + E L+ L+L+ME G PD +L
Sbjct: 1032 IEVDNIIHEFIAADRSHPETAEIYEELKRLSLEMERAGYSPDTQYVL 1078
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 157/620 (25%), Positives = 285/620 (45%), Gaps = 75/620 (12%)
Query: 15 SNPSRPFSIITYNNSLLDCFDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLS 71
SN +P T + +D L+Q C +++ + K++H Q++ G FL+ +++
Sbjct: 70 SNAYQPRPTETNRAAYVD----LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLIN 125
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+Y + + DA VF P + + WNS++ G + A +L+ +M+ G +
Sbjct: 126 MYVKCRSVSDAHQVFLKMP---RRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPS 182
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
T+ ++ AC +G+ +H+ +++ G+Q + + N L+ MY K + +
Sbjct: 183 KITYISILTAC----CSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSAR 238
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
++F + ++ +S+N M +A + + LF +M EG+ P+ VT+ +LL +
Sbjct: 239 QVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPS 298
Query: 252 RLEETMDLFDMMRKRG----IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
L+E + + G I VG A+A + C D+A + + F + V
Sbjct: 299 MLDEGKRIHKLAVNEGLNSDIRVGT-ALATMFVRCGDVAG--AKQALEAFADRD-----V 350
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS--------------------------- 340
V NALI +HG + A + ++ +V
Sbjct: 351 VVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSH 410
Query: 341 ------------WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
N+LI+ YA G A E+F+ + K D +ISW+A+I +A
Sbjct: 411 ISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRD--------LISWNAIIAGYA 462
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
EA+ L+++MQ V VT LLS C S+A + G+ IH ++R + N
Sbjct: 463 RREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGH 522
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
+ N L+NMY +CG + E VFE +D+I+WNSMI+G+ +G E A F EM + G
Sbjct: 523 LANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEG 582
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+PD + F +VL C + + GR+I M++ E ++ + ++++ R G LQ+A
Sbjct: 583 LEPDKITFASVLVGCKNPEALELGRQIH-MLIIESGLQLDVNLGNALINMYIRCGSLQDA 641
Query: 569 SDIVKNMPMEPNAYVWGTLL 588
++ ++ N W ++
Sbjct: 642 YEVFHSL-RHRNVMSWTAMI 660
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 137/564 (24%), Positives = 260/564 (46%), Gaps = 101/564 (17%)
Query: 20 PFSIITYNNSLLDCF--DHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFG 77
P +TY N LLD F +L + K IH+L + G N+ + + +++ R G
Sbjct: 281 PPDKVTYIN-LLDAFTTPSMLDEGKRIHKLA------VNEGLNSDIRVGTALATMFVRCG 333
Query: 78 RLFDARNVFET-APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
+ A+ E A D +++N+++ +G YE A + Y +MR GV+ + T+
Sbjct: 334 DVAGAKQALEAFADRDV----VVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYL 389
Query: 137 LVIRAC---KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
V+ AC K +G+ G+++H+H+ ++G +V I N LI MYA+ G
Sbjct: 390 SVLNACSTSKALGA-------GELIHSHISEVGHSSDVQIGNSLISMYARCG-------- 434
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
D A ELF M + + ++W ++++ +AR
Sbjct: 435 -----------------------DLPRARELFNTMP----KRDLISWNAIIAGYARREDR 467
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
E M L+ M+ G++ G +LS C + +A GK+IH +++ G + + NAL
Sbjct: 468 GEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANAL 527
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ +Y + G + AQN+F G+
Sbjct: 528 MNMYRRCGSIMEAQNVFE--------------------------------------GTRA 549
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
R ++ISW+++I A +G E A LF +M+ + + +T + +L C AL +GR+
Sbjct: 550 R-DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQ 608
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
IH ++ + ++ + N L+NMY++CG L++ + VF + +++++W +MI G+ G
Sbjct: 609 IHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGE 668
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHY 552
A F +M GFKP F ++L AC + ++EG+++ ++ + ++ + +
Sbjct: 669 DRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGN- 727
Query: 553 ACMVDLLGRAGLLQEASDIVKNMP 576
++ ++G + +A + MP
Sbjct: 728 -ALISAYSKSGSMTDARKVFDKMP 750
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/477 (23%), Positives = 222/477 (46%), Gaps = 43/477 (9%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H +++ G ++ + N LI MY K +SD+ ++F K+ ++ ISWN + S +A
Sbjct: 104 IHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGF 163
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
A +LF+ M+ G P+ +T+ S+L++ LE + + + G +
Sbjct: 164 KKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNS 223
Query: 278 VLSV---CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+L++ C DL + V G + V N ++ +Y + V+ LF ++
Sbjct: 224 LLNMYGKCEDLPSARQ-------VFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMS 276
Query: 335 EKNI----VSWNALITSYAEAGLCDEAVEV----------------------FSQLEKLD 368
+ I V++ L+ ++ + DE + F + +
Sbjct: 277 SEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVA 336
Query: 369 GG-----SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
G + +V+ ++A+I A A +G EEA + + +M+ VV N T +L+ C+
Sbjct: 337 GAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACS 396
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
S AL G IH H+ V + ++ + N L++MY +CG L +F + K+DLI+WN+
Sbjct: 397 TSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNA 456
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
+I+GY A+ +++M G KP V F+ +LSAC+++ ++G+ I + ++R
Sbjct: 457 IIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS- 515
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
I+ ++++ R G + EA ++ + + W +++ H + + A
Sbjct: 516 GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR-DIISWNSMIAGHAQHGSYEAA 571
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 130/291 (44%), Gaps = 39/291 (13%)
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
R E DL + + R E A ++ C + K IH +++ G +F+ N
Sbjct: 62 RGSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSN 121
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
LI +Y K V A +F ++ ++++SWN+LI+ YA+ G +A +
Sbjct: 122 LLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQ------------ 169
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
LF +MQ A + + +T +L+ C A L G
Sbjct: 170 ---------------------------LFEEMQTAGFIPSKITYISILTACCSPAELEYG 202
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
++IH ++ ++ VQN LLNMY KC L VF I ++D++++N+M+ Y
Sbjct: 203 KKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQK 262
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
E + F +M G PD V ++ +L A + +++EG+RI + V E
Sbjct: 263 AYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNE 313
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 161/339 (47%), Gaps = 17/339 (5%)
Query: 34 FDHLLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + + + K+V ++ +G + ++S Y++ G + DAR VF+ P
Sbjct: 691 FSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMP 750
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ WN ++ NGL AL+ +M++ GV+ + F+F ++ AC +
Sbjct: 751 ---NRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEE 807
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ VH +++ QG+V + LI MYAK G + ++ ++FD KN ++WN M +
Sbjct: 808 ----GKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMIN 863
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGIE 269
+A + AL+ F M+ EG++P+ T+TS+LS+ G + E +F + + G+
Sbjct: 864 AYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLS 923
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
E ++ + + + + + F V L+ HG+V +A++
Sbjct: 924 PTIEHYGCLVGLLGRAGRFQEAETL---INQMPFPPDAAVWETLLGACRIHGNVALAEHA 980
Query: 330 FS---EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
+ ++ +N + L YA AG D+ ++ +E
Sbjct: 981 ANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVME 1019
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 94/181 (51%), Gaps = 3/181 (1%)
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
RG E DL Q N L+ C +L + IH +V + +I + N
Sbjct: 62 RGSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSN 121
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L+NMY+KC + + H VF ++ ++D+I+WNS+IS Y G + A FEEM AGF P
Sbjct: 122 LLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIP 181
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHYACMVDLLGRAGLLQEASD 570
+ ++++L+AC + G++I ++ ++ +P++++ ++++ G+ L A
Sbjct: 182 SKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQN--SLLNMYGKCEDLPSARQ 239
Query: 571 I 571
+
Sbjct: 240 V 240
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/694 (31%), Positives = 371/694 (53%), Gaps = 45/694 (6%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
D LLQ CK KQ+ +Q I+TG + A+R+++ + L
Sbjct: 6 LDSLLQSCKCPRHFKQLLSQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLR 65
Query: 94 KSSSLLWNSILRVNV--SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR 151
++ WN+I+R ++ N ++ AL Y D +T+P++++ C + R
Sbjct: 66 NPNTFTWNTIMRAHLYLQNSPHQ-ALLHYKLFLASHAKPDSYTYPILLQCC----AARVS 120
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
G+ +H H + GF G+V++ N L+ +YA G + + ++F++ V + +SWN + +G
Sbjct: 121 EFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAG 180
Query: 212 FALNFDCDGALELFKRME-----------------------------LEGLEPNFVTWTS 242
+ + + A +F+ M + G E + V+W++
Sbjct: 181 YVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSA 240
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
++S + + EE + LF M+ G+ V + LS C+ + MG+ +HG +K G
Sbjct: 241 MVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVG 300
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE-KNIVSWNALITSYAEAGLCDEAVEVF 361
EDYV +KNALI +Y G++ A+ +F + E +++SWN++I+ Y G +A +F
Sbjct: 301 VEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLF 360
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
SM +V+SWSA+I +A + EAL LF++MQL V + + +S
Sbjct: 361 Y--------SMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISA 412
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
C A L++G+ IH ++ R + N+++ L++MYMKCGC+E VF +E+K + TW
Sbjct: 413 CTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTW 472
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
N++I G MNG E +L F +M + G P+ + F+ VL AC H GLVN+GR F+ M+
Sbjct: 473 NAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIH 532
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
E +IE ++HY CMVDLLGRAGLL+EA +++ +MPM P+ WG LL +CR H++ ++ E
Sbjct: 533 EHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGE 592
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI 661
+ ++ L + G ++LLSNIYA+ G W + ++R G+ K G S IE +
Sbjct: 593 RLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTV 652
Query: 662 HMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
H F +G+ + ++ +L+ +A +++ +G VP
Sbjct: 653 HEFLAGDKTHPQINDIEHMLDVVAAKLKIEGYVP 686
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/673 (32%), Positives = 371/673 (55%), Gaps = 55/673 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLS---IYARFGRLFDARNVFETAPFDC 93
LL CKT+ L+ +H ++I TG + + + ++++ + F L A +VF++
Sbjct: 8 LLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQ--- 64
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + L+WN++ R + + +AL LYV M LG++ + +TFP +++AC +FR
Sbjct: 65 EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFRE--- 121
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
GQ +H HVL++G ++++ LI MY K G+ D+ K+FD+ ++ +S+ + G+A
Sbjct: 122 -GQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYA 180
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
N A ++F + ++ + V+W +L+S +A G +E ++LF M K ++
Sbjct: 181 SNGYIXSAQKMFDEIPVK----DVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDES 236
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ VLS CA A+ +G+ +H ++ GF + + NALI +Y K G+V+ A LF +
Sbjct: 237 TMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGL 296
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
K +VISW+ +IG +
Sbjct: 297 SYK---------------------------------------DVISWNTLIGGYTHMNLY 317
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR--VSMNKNILVQN 451
+EAL LF++M + N VT+ +L CA A++IGR IH ++ + ++ ++
Sbjct: 318 KEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRT 377
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++MY KCG +E VF+ + + L +WN+MI G+ M+G A F M + G +P
Sbjct: 378 SLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEP 437
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D + FV +LSACSH+G+++ GR IF M +++I P++EHY CM+DLLG +GL +EA ++
Sbjct: 438 DDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEM 497
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
+ +M M+P+ +W +LL +C+MH N ++ E+ A + + + +GSY+LLSNIYA +GRW
Sbjct: 498 INSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRW 557
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
+ AK R KG+KKV G S IE+ +H F G+ L + + +LEE+ + +E
Sbjct: 558 NEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLEEA 617
Query: 692 GCVPDNDIILWEM 704
G VPD +L EM
Sbjct: 618 GFVPDTSEVLQEM 630
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/670 (32%), Positives = 350/670 (52%), Gaps = 58/670 (8%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA---- 89
LL C + L +Q+H +I G L ++++ Y+ F L DA + E +
Sbjct: 180 LLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILH 239
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
PF WN ++ V NG + AL Y +M K G+ D FT+P V++AC
Sbjct: 240 PFP-------WNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKAC----GEE 288
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
FG+ VH + + ++ + N LI MY K G++ + LFDK+ ++ +SWN M
Sbjct: 289 LDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMI 348
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
S +A + A ELF M E +E N + W ++ + R G + ++L MRK G
Sbjct: 349 SVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSH 408
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
+ + A+ + L C+ + +GK IH F I+ F + VKN+LI +Y + D+K A L
Sbjct: 409 LDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLL 468
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
F +E K+ +ISW+++I
Sbjct: 469 FQLMEAKS---------------------------------------LISWNSIISGCCH 489
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR-VSMNKNIL 448
R EEA L R+M L+ + N VTI+ +L +CA A L G+E H ++ R ++L
Sbjct: 490 MDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLL 549
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
+ N L++MY + G + E VF+ + ++D +T+ SMI+GYGM G G+ AL FEEM
Sbjct: 550 LWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQ 609
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
KPD + +AVLSACSH+GLV +G+ +F+ M + + P +EH+ACM DL GRAGLL +A
Sbjct: 610 IKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKA 669
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
+I++NMP +P +W TL+ +CR+H+NT++ E A ++ + E G Y+L++N+YAA+
Sbjct: 670 KEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAA 729
Query: 629 GRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
G W AKVR + G++K G +W++V F ++ ++ + +LE L + +
Sbjct: 730 GCWNKLAKVRXFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMVI 789
Query: 689 ENKGCVPDND 698
+ G + D
Sbjct: 790 KEAGYISSED 799
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 121/306 (39%), Gaps = 80/306 (26%)
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
I+ +LS C D+ + G+ +HG +I GFE + + L+ Y + A +
Sbjct: 176 PISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVI---T 232
Query: 334 EEKNIV---SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
E NI+ WN LI+SY G C +A+ + Q+ K RP+ ++ +V+ A
Sbjct: 233 ENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVK----KGIRPDNFTYPSVLKA---- 284
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
C E L G+E+H + + +++V
Sbjct: 285 -------------------------------CGEELDLGFGKEVHESINASRIKWSLIVH 313
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS------------------------ 486
N L++MY KCG + +F++I ++D ++WNSMIS
Sbjct: 314 NALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIE 373
Query: 487 -----------GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
GY G + AL +M + G D VA + L ACSH G G+ I
Sbjct: 374 LNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGLGACSHIGDAKLGKEI 433
Query: 536 FDMMVR 541
+R
Sbjct: 434 HSFAIR 439
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 103/200 (51%), Gaps = 9/200 (4%)
Query: 397 LDLFRKMQLAKVVANSVT-------ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
LD F+ + L ++ A+S + IS LLS C + +L GR++HGH++ + ++ ++
Sbjct: 152 LDAFKTVSLIRLHASSASQDLIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPIL 211
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
L+ Y L + H++ E WN +IS Y NG + AL+ +++M++ G
Sbjct: 212 VPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGI 271
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
+PD + +VL AC + G+ + + + RI+ + + ++ + G+ G + A
Sbjct: 272 RPDNFTYPSVLKACGEELDLGFGKEVHE-SINASRIKWSLIVHNALISMYGKCGKVGIAR 330
Query: 570 DIVKNMPMEPNAYVWGTLLN 589
D+ +P E +A W ++++
Sbjct: 331 DLFDKIP-ERDAVSWNSMIS 349
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 233/691 (33%), Positives = 385/691 (55%), Gaps = 27/691 (3%)
Query: 62 SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYV 121
+AF VLS YA+ G + + F+ P + S+ W +++ + G Y A+++
Sbjct: 79 TAFSWNTVLSAYAKRGDMDSSCEFFDRLP---QRDSVSWTTMIVGYKNIGQYHKAIRIMG 135
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
+M + G+ FT V+ + + + R G+ VH+ ++++G +GNV + N L+ MY
Sbjct: 136 EMMREGIEPSQFTLTNVLAS---VAATRC-LETGKKVHSFIVKLGLRGNVSVSNSLLNMY 191
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
AK G + +FD++ VK+ SWN M + D A+ F++M E + VTW
Sbjct: 192 AKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMA----ERDIVTWN 247
Query: 242 SLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
S++S + + G +D+F M+R + +A VLS CA+L +G+ IH ++
Sbjct: 248 SMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVT 307
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN--IVSWNALITSYAEAGLCDEAV 358
GF+ V NALI +Y + G V+ A+ L + K+ I + AL+ Y + G +EA
Sbjct: 308 TGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAK 367
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
+F L+ D V++W+A+I + +G EA++LFR M + NS T++ +
Sbjct: 368 NIFDSLKDRD--------VVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAM 419
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE-KKD 477
LSV + A+L G++IHG V+ ++ V N L+ MY K G + F+ I ++D
Sbjct: 420 LSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERD 479
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
++W SMI +G E AL FE M+ G +PD + +V V SAC+HAGLVN+GR+ FD
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFD 539
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNT 597
MM +I P + HYACMVDL GRAGLLQEA + ++ MP+EP+ WG+LL++CR++KN
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNI 599
Query: 598 DVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
D+ + A ++ L E +G+Y L+N+Y+A G+WE+AAK+R S K +KK G SWIEV
Sbjct: 600 DLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEV 659
Query: 658 KRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVK-RIQRI 716
K K+H F + + + ++++ +++ G VPD +L ++ ++ VK +I R
Sbjct: 660 KHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHDL--EEEVKEQILRH 717
Query: 717 RADNIKSKHRIVGFRNLKLGLRLLLSLRSTN 747
++ + ++ + K LR++ +LR N
Sbjct: 718 HSEKLAIAFGLISTPD-KTTLRIMKNLRVCN 747
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/666 (33%), Positives = 360/666 (54%), Gaps = 55/666 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
LL+ ++ Q+ Q+H Q ++ G L +++ +++ + AR V + P +
Sbjct: 5 LLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTP---SPT 57
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
WNS++R +G +N+L LY+KM + FTFP V++AC +GS G+
Sbjct: 58 DFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLE----GE 113
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H HVL++GF ++ + N LI MY K ++ + +D + ++ +SWN + SG+
Sbjct: 114 QIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWG 173
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
+ A +LF+ M + N V WT++++ + + G E + LF M EV A
Sbjct: 174 QVEKARDLFEEMPMR---RNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAAT 230
Query: 277 VV--LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+V LS C+ L +G+ + F+ + ALI +Y K GDV
Sbjct: 231 MVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDV----------- 279
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
++A +F DG S + N+ SW+A+I G E
Sbjct: 280 --------------------EKAWRIF------DGVSCK--NLPSWNAIITGCVQGGLLE 311
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
EA+DL+R M+ V N +T+ +LS CA AL +GRE+H ++ R ++ N+++ L+
Sbjct: 312 EAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALV 371
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCG +++ L+F + +KD+ WN+MI G +G G ++LA F +M+ AG +P+ V
Sbjct: 372 DMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDV 431
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F+ VLSAC+H+GLV EGR F M + + P++EHYACMVDLLGRAG L+EA ++V+N
Sbjct: 432 TFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQN 491
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
M + P++ +WG LL++CR+H+N ++A+ ++ I G +LLSNIYA+SGRW+D
Sbjct: 492 MLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIGFCILLSNIYASSGRWKDV 551
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
A+VR K K +KK +G SW+EV +H F ++ + E L ++ +G V
Sbjct: 552 ARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVEDTTHLKSGEIYGAYEILVNHLKAEGYV 611
Query: 695 PDNDII 700
+ D I
Sbjct: 612 ANFDFI 617
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 34/202 (16%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
LLS+ + +L +IH ++ + +Q L+ + ++ V +Q
Sbjct: 2 LLSLLRTATSLTQIHQIHAQ----TLIHGLPLQTHLIPKLIDLHSIDYARFVLDQTPSPT 57
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI-- 535
+WNS+I Y ++G +N+L + +M+ + KP F VL ACS G V EG +I
Sbjct: 58 DFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHT 117
Query: 536 -----------------FDMMVREFRIEPQMEHYACM-----------VDLLGRAGLLQE 567
DM + FR++ + M + + G +++
Sbjct: 118 HVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEK 177
Query: 568 ASDIVKNMPMEPNAYVWGTLLN 589
A D+ + MPM N W ++N
Sbjct: 178 ARDLFEEMPMRRNVVCWTAMIN 199
>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 611
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/662 (32%), Positives = 344/662 (51%), Gaps = 92/662 (13%)
Query: 37 LLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+LQ C K++H KQ+H Q+ V+G F+ +++ +YA LF A+ +F+ P
Sbjct: 1 MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMP--- 57
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + W +I + +G+Y+ ++ Y M+ VL D + FP V+RAC + F
Sbjct: 58 QPNVYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQL----LWFE 113
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G +H V+ G + N+ + N LI MY K G + +F+++ ++ SWN M SG+
Sbjct: 114 GGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYV 173
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF------------- 260
N D A+EL M L+G EP+ VTW +L+ ++ + GR +E ++
Sbjct: 174 SNGLADLAVELLNCMRLDGFEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIEQPNIISWTT 233
Query: 261 -------------------DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
DM+ + + + + VL C + A GK IHG+ K
Sbjct: 234 LISSYSKIGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTK- 292
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN----ALITSYAEAGLCDEA 357
E N V ++ AL+T YA+ G +A
Sbjct: 293 --------------------------------METNTVFYSSAGAALLTMYAKCGRIQDA 320
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
+ VF ++K D +++W+A+I F G++A++ FR+MQ + + TIS
Sbjct: 321 INVFELMDKSD--------IVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTIST 372
Query: 418 LLSVCAESAALNIGREIHGHVVR-VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
+L VC L G IH +V + ++++ + V N +++MY KCGC+ + +F + K
Sbjct: 373 ILPVCD----LQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNK 428
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D+++WN+MI G+GM+G G+ AL +EMI +G P+ F +VLSACSH+GLV+EG R+F
Sbjct: 429 DVVSWNTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLF 488
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
M ++ I P+MEHY+C+VD+L RAG +A + MP+EP+ +WG LL +CR ++N
Sbjct: 489 RSMTEDYSITPRMEHYSCIVDMLARAGQFADAVTFIHKMPLEPDKSIWGALLAACRAYQN 548
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
D A Q+ + + G Y+ LSNIYA +GRW+DA +VR + KGL K +GQS IE
Sbjct: 549 LDFGRLAAEQLIRMEPKCAGHYVTLSNIYARAGRWDDAGRVRKEIEGKGLVKPSGQSLIE 608
Query: 657 VK 658
+
Sbjct: 609 TR 610
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 163/356 (45%), Gaps = 27/356 (7%)
Query: 31 LDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAF--LAARVLSIYARFGRLFDARNV 85
LDC +L C+ I L K++H N + A +L++YA+ GR+ DA NV
Sbjct: 264 LDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAINV 323
Query: 86 FETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
FE KS + WN+++ V L + A++ + +M+++ + D T ++ C
Sbjct: 324 FELMD---KSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTILPVCDL- 379
Query: 146 GSFRFRFSFGQIVHNHVLQ-MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
+G +H +V + + V + N +I MY K G + ++ +F + K+ +S
Sbjct: 380 -------QYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVS 432
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMM 263
WN M GF ++ AL+L K M L G+ PN T+TS+LS+ + G ++E LF M
Sbjct: 433 WNTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRSMT 492
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
I E + ++ + A A + F+ K E + AL+ + ++
Sbjct: 493 EDYSITPRMEHYSCIVDMLA--RAGQFADAV-TFIHKMPLEPDKSIWGALLAACRAYQNL 549
Query: 324 ---KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
++A +E K + L YA AG D+A V ++E G + +P+
Sbjct: 550 DFGRLAAEQLIRMEPKCAGHYVTLSNIYARAGRWDDAGRVRKEIE---GKGLVKPS 602
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 228/735 (31%), Positives = 381/735 (51%), Gaps = 117/735 (15%)
Query: 31 LDCFDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
L + +LQ C K+I ++V + + +G L +++ +Y + G L + R VF+
Sbjct: 150 LGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFD 209
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
+S LWN ++ +G Y ++ L+ +M +LG+ + +TF +++ +
Sbjct: 210 KLS---ESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVA- 265
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
R G+ VH + ++GF +VN LI Y ++ + KLFD++ ++ ISWN
Sbjct: 266 ---RVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNS 322
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWT-------------------------- 241
M SG+ N D +E+F +M + G++ + T
Sbjct: 323 MISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAA 382
Query: 242 ----------SLLSSHARCG------RLEETMD-------------------------LF 260
+LL +++CG R+ E MD LF
Sbjct: 383 TLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLF 442
Query: 261 DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
D M+ RG+ A+ +L+ CA GK++H ++ + E FV NAL +Y K
Sbjct: 443 DEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKC 502
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
G +K A ++FS +++K+++SWN +I Y + L +EA+ +F+++++ +P
Sbjct: 503 GSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQR-----ESKP----- 552
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+ T++ +L CA AAL+ GREIHG+ +R
Sbjct: 553 ------------------------------DGTTVACILPACASLAALDKGREIHGYALR 582
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
+++ V N +++MY+KCG L +F+ I KDL++W MI+GYGM+G G A+ T
Sbjct: 583 NGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINT 642
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F +M G +PD V+F+++L ACSH+GL++EG +IF++M +E +IEP +EHYACMVDLL
Sbjct: 643 FNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLA 702
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML 620
R G L +A +K MP++P+A +WG LL CR+H + +AE +A +IF L E TG Y+L
Sbjct: 703 RTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVL 762
Query: 621 LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEV 680
L+NIYA + +WE+ K+R +GLKK G SWIE+K KI++F +G+ + K + +
Sbjct: 763 LANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELL 822
Query: 681 LEELALQMENKGCVP 695
L+ L +M+ +G P
Sbjct: 823 LKRLRSKMKEEGYSP 837
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/694 (32%), Positives = 369/694 (53%), Gaps = 65/694 (9%)
Query: 4 SLLHQPHQF--SPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANA 61
S ++ P F P + S ++ T S ++C L+ CK++ QLKQ+ +Q+ G
Sbjct: 72 SPVYIPSFFFKPPFSSSSASNLQTNKKSCIEC----LRNCKSMDQLKQIQSQIFRIGLEG 127
Query: 62 SAFLAARVLSIYA--RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKL 119
++++ A G L A +F S ++N ++++ G+ L L
Sbjct: 128 DRDTINKLMAFCADSSLGNLRYAEKIFNYVQ---DPSLFVYNVMVKIYAKRGILRKVLLL 184
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
+ ++R+ G+ DGFT+P V++A + R G+ V +++ G + ++ N LI
Sbjct: 185 FQQLREDGLWPDGFTYPFVLKAIGCLRDVRQ----GEKVRGFIVKTGMDLDNYVYNSLID 240
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MY ++ + ++ KLFD++ ++ +SWN+M
Sbjct: 241 MYYELSNVENAKKLFDEMTTRDSVSWNVM------------------------------- 269
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV-VLSVCADLAADHMGKVIHGFV 298
+S + RC R E+ ++ F M++ G E EA V LS C L +G IH +V
Sbjct: 270 ----ISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYV 325
Query: 299 IKG-GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
K GF + NAL+ +Y K G + +A+N+F E+ KN++ W ++I+ Y G EA
Sbjct: 326 RKELGFT--TRIDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREA 383
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
++F + D V+ W+A+I + ++A+ LFR+MQ+ K+ + T+
Sbjct: 384 RDLFDKSPVRD--------VVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVT 435
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
LL+ CA+ AL G+ IHG++ + +++V L+ MY KCGC+++ +F ++E KD
Sbjct: 436 LLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKD 495
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+W S+I G MNG AL F EM G KPD + F+ VLSACSH GLV EGRR F+
Sbjct: 496 TASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFN 555
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV---WGTLLNSCRMH 594
M + RIEP++EHY C++DLLGRAGLL EA ++++ +P+E V +G LL++CR+H
Sbjct: 556 SMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIH 615
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
N D+ E +A ++ + + + + LL+NIYA+ RWEDA KVR K G+KK+ G S
Sbjct: 616 NNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSL 675
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
IEV +H F G+ ++ +C +L + Q+
Sbjct: 676 IEVDGIVHEFLVGDPSHPEMIEICSMLNRVTGQL 709
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/737 (29%), Positives = 372/737 (50%), Gaps = 116/737 (15%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++L C K + + ++ + ++ G + F+ +++++ + G + DA VF P
Sbjct: 208 FVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLP 267
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + W S++ + ++ A L+ M + GV D F +++AC +
Sbjct: 268 ---RRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQ 324
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ VH + ++G +++ L+ MY K G M D+ ++F+ V+ +N +SW M +
Sbjct: 325 ----GKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIA 380
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTW------------------------------ 240
GFA + + A F +M G+EPN VT+
Sbjct: 381 GFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYIT 440
Query: 241 -----TSLLSSHARCGRLEETMDLFDMMRKR----------------------------- 266
T+LLS +A+CG L + ++F+ + K+
Sbjct: 441 DDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALL 500
Query: 267 --GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
GI+ + +L+VC A +GK + +I+ GFE + ++NAL+ ++ GD+
Sbjct: 501 KEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLM 560
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A NLF+++ E+++ +SW+ +I
Sbjct: 561 SAMNLFNDMPERDL---------------------------------------VSWNTII 581
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
F +G + A D F+ MQ + V + +T +GLL+ CA AL GR +H + +++
Sbjct: 582 AGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALD 641
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
+++V GL++MY KCG +++ HLVF + KK++ +W SMI+GY +G G+ AL F +M
Sbjct: 642 CDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQM 701
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+ G KPD + FV LSAC+HAGL+ EG F+ M ++F IEP+MEHY CMVDL GRAGL
Sbjct: 702 QQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGL 760
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNI 624
L EA + + M ++P++ +WG LL +C++H + ++AE +A + L G Y++LSNI
Sbjct: 761 LHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNI 820
Query: 625 YAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
YAA+G W++ K+R +G+ K GQSWIEV ++H+F S + ++ + L L
Sbjct: 821 YAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRL 880
Query: 685 ALQMENKGCVPDNDIIL 701
++M+ G VPD +L
Sbjct: 881 HMEMKKLGYVPDTRYVL 897
Score = 179 bits (453), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 120/512 (23%), Positives = 225/512 (43%), Gaps = 107/512 (20%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ +HNH+ Q ++ + N LI MYAK G + + ++FD++ K+ SWN++ G+
Sbjct: 123 GERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQ 182
Query: 215 NFDCDGALELFKRMELEGLEPNFVTW---------------------------------- 240
+ + A L ++M +G++P+ T+
Sbjct: 183 HRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFV 242
Query: 241 -TSLLSSHARCGRLEETM-------------------------------DLFDMMRKRGI 268
T+L++ H +CG +++ + +LF +M + G+
Sbjct: 243 GTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGV 302
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
+ A +L C A GK +H + + G + ++V AL+ +Y K G ++ A
Sbjct: 303 QPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALE 362
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+F+ ++ +N+VSW A+I +A+ G +EA F+
Sbjct: 363 VFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFN-------------------------- 396
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
KM + + N VT +L C+ +AL GR+IH +++ +
Sbjct: 397 -------------KMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDR 443
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
V+ LL+MY KCG L + VFE+I K++++ WN+MI+ Y + +NA+ATF+ +++ G
Sbjct: 444 VRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEG 503
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
KPD F ++L+ C + G+ + +++R E + +V + G L A
Sbjct: 504 IKPDSSTFTSILNVCKSPDALELGKWVQSLIIRA-GFESDLHIRNALVSMFVNCGDLMSA 562
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
++ +MP E + W T++ H A
Sbjct: 563 MNLFNDMP-ERDLVSWNTIIAGFVQHGENQFA 593
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/680 (32%), Positives = 357/680 (52%), Gaps = 40/680 (5%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
+VH L+ G + L+ ++++Y ++ + A VF+ P LWN+I+ N+
Sbjct: 152 EVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPL---QEDFLWNTIVMANL 208
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+ +E+AL+L+ +M+ T +++AC G R + G+ +H +V++ G
Sbjct: 209 RSEKWEDALELFRRMQSASAKATDGTIVKLLQAC---GKLR-ALNEGKQIHGYVIRFGRV 264
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC-DGALELFKR 227
N I N ++ MY++ ++ + FD N SWN + S +A+N DC +GA +L +
Sbjct: 265 SNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVN-DCLNGAWDLLQE 323
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
ME G++P+ +TW SLLS H G E + F ++ G + + +I L L
Sbjct: 324 MESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGC 383
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
++GK IHG++++ E V+V +L+ Y K+ + A+ +F + KNI +WN+LI+
Sbjct: 384 FNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISG 443
Query: 348 YAEAGLCDEAVEVFSQLEK-------------LDGGSME------------------RPN 376
Y GL D A ++ +Q+++ + G SM PN
Sbjct: 444 YTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPN 503
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
V+SW+A+I N +AL F +MQ V NS TI LL CA S+ L IG EIH
Sbjct: 504 VVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHC 563
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
+R +I + L++MY K G L+ H VF I++K L WN M+ GY + G GE
Sbjct: 564 FSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEE 623
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
F+EM + G +PD + F A+LS C ++GLV +G + FD M ++ I P +EHY+CMV
Sbjct: 624 VFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMV 683
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
DLLG+AG L EA D + +P + +A +WG +L +CR+HK+ +AE A + L +
Sbjct: 684 DLLGKAGFLDEALDFIHAVPQKADASIWGAVLAACRLHKDIKIAEIAARNLLRLEPYNSA 743
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKN 676
+Y L+ NIY+ RW D +++ S G+K SWI+VK+ IH+FS+ +
Sbjct: 744 NYALMMNIYSTFDRWGDVERLKESMTALGVKIPNVWSWIQVKQTIHVFSTEGKSHPEEGE 803
Query: 677 VCEVLEELALQMENKGCVPD 696
+ L +L +++ G V D
Sbjct: 804 IYFELYQLISEIKKLGYVLD 823
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 147/594 (24%), Positives = 267/594 (44%), Gaps = 58/594 (9%)
Query: 9 PHQFSPSNPS------RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANAS 62
P SPS+ S + S ++ F H + +T++ ++++H Q+I +
Sbjct: 3 PRSHSPSSISLGMSEAQLVSSPQFSPPKFSPFFHPFGEIRTLNSVRELHAQIIKMPKKRN 62
Query: 63 -AFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS-NGLYENALKLY 120
+ ++ Y +FG A VF + LLWNS + S G L ++
Sbjct: 63 LVTMDGSMMRNYLQFGDFESATKVFFVG---FARNYLLWNSFIEEFASFGGDSHEILAVF 119
Query: 121 VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
++ GV D +V++ C + G VH +++ GF +VH+ LI +
Sbjct: 120 KELHDKGVKFDSKALTVVLKICLAL----MELWLGMEVHACLVKRGFHVDVHLSCALINL 175
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
Y K + + ++FD+ ++ WN + + + ALELF+RM+
Sbjct: 176 YEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRMQSA--------- 226
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
S+ A G I +L C L A + GK IHG+VI+
Sbjct: 227 ----SAKATDG----------------------TIVKLLQACGKLRALNEGKQIHGYVIR 260
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G + N+++ +Y ++ +++A+ F E+ N SWN++I+SYA + A ++
Sbjct: 261 FGRVSNTSICNSIVSMYSRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDL 320
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
++E S +P++I+W++++ G E L FR +Q A +S +I+ L
Sbjct: 321 LQEME----SSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQ 376
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
N+G+EIHG+++R + ++ V L++ Y+K CL++ +VF + K++
Sbjct: 377 AVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICA 436
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WNS+ISGY GL +NA +M E G KPD V + +++S S +G E + + +
Sbjct: 437 WNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVIN-RI 495
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTLLNSC 591
+ + P + + M+ + +A M E PN+ TLL +C
Sbjct: 496 KSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLLRAC 549
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 131/520 (25%), Positives = 219/520 (42%), Gaps = 100/520 (19%)
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKL--FDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
G + +N + ++A++ +M L D ++NY+ + D + A ++F
Sbjct: 39 GEIRTLNSVRELHAQIIKMPKKRNLVTMDGSMMRNYLQFG----------DFESATKVF- 87
Query: 227 RMELEGLEPNFVTWTSLLSSHARCG-RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
G N++ W S + A G E + +F + +G++ ++A+ VVL +C L
Sbjct: 88 ---FVGFARNYLLWNSFIEEFASFGGDSHEILAVFKELHDKGVKFDSKALTVVLKICLAL 144
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+G +H ++K GF V + ALI +Y K+ + A +F E + WN ++
Sbjct: 145 MELWLGMEVHACLVKRGFHVDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIV 204
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
A L E + E+AL+LFR+MQ
Sbjct: 205 M----ANLRSE-----------------------------------KWEDALELFRRMQS 225
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
A A TI LL C + ALN G++IHG+V+R N + N +++MY + LE
Sbjct: 226 ASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLEL 285
Query: 466 GHLVFEQIE-----------------------------------KKDLITWNSMISGYGM 490
+ F+ E K D+ITWNS++SG+ +
Sbjct: 286 ARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLL 345
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
G EN L F + AGFKPD + + L A G N G+ I ++R + + +
Sbjct: 346 QGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRS---KLEYD 402
Query: 551 HYAC--MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
Y C +VD + L +A ++V + N W +L++ D AE + +Q+
Sbjct: 403 VYVCTSLVDKYIKNDCLDKA-EVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMK 461
Query: 609 --GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
G+ + L+S Y+ SGR E+A V K+ GL
Sbjct: 462 EEGIKPDLVTWNSLVSG-YSMSGRSEEALAVINRIKSLGL 500
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/691 (31%), Positives = 358/691 (51%), Gaps = 74/691 (10%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
V++ Y R+ +AR +F+ P + +S+ W ++ V Y A ++VKM +
Sbjct: 301 VVTGYCHCYRMSEARELFDQMP---ERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVA 357
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D F +V+ A + S I ++ G++G+V + + ++ Y + G +
Sbjct: 358 RPDQSIFVVVLSAITGLDDLELIGSLRPIA----IKTGYEGDVVVGSAILNAYTRNGSLD 413
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL------------------ 230
+ F+ + +N SW M + FA D A++L++R+
Sbjct: 414 LAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGR 473
Query: 231 ---------EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA----- 276
E L PN V W ++++ + + G L+E DLF M + A IA
Sbjct: 474 IQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQN 533
Query: 277 --------------------------VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
LS CA++ +G+VIH IK G + +V
Sbjct: 534 EESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVM 593
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
N LI +Y K G+V+ ++F I K+ VSWN+LI+ +E + D+A VF ++ K D
Sbjct: 594 NGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRD-- 651
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
V+SW+A+I A+ G GE ALDLF M + N +T++ LLS C A+ +
Sbjct: 652 ------VVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKL 705
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
G + H + ++ + + V N L+ MY KCG E+G VFE++ + DLITWN+++ G
Sbjct: 706 GEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQ 764
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
NGLG+ A+ FE+M G PD ++F+ VL ACSHAGLV+EG F+ M +++ I P +
Sbjct: 765 NGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVY 824
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL 610
HY CMVDLLGRAG L EA +++NMP++P++ +W LL +CR+H+N ++ + +A ++F +
Sbjct: 825 HYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQM 884
Query: 611 ITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSL 670
+ +Y+LLSN++A+ G W+ A++R K +GL K G SWI+VK K+H F +G+
Sbjct: 885 TKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQVKNKLHCFVTGDRT 944
Query: 671 QSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
++ + L+E G +PD + +L
Sbjct: 945 HDQIEEIYSALKEYYGCFRATGYMPDTNFVL 975
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 146/553 (26%), Positives = 238/553 (43%), Gaps = 90/553 (16%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY-----VKMRKLGV 128
R GR+ +AR VF + + WNS++ NG + A L+ +R +
Sbjct: 182 GRLGRVEEARRVFNEM---IQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTI 238
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
L G+ I + V + + NV N +I Y + G +
Sbjct: 239 LLTGYAKEGRIEEAR-----------------EVFESMTERNVVSWNAMISGYVQNGDLK 281
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
++ KLFD++ KN SWN + +G+ + A ELF +M E N V+W ++S +
Sbjct: 282 NARKLFDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQMP----ERNSVSWMVMISGYV 337
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
E D+F M + VVLS L + + IK G+E V
Sbjct: 338 HISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVV 397
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS------ 362
V +A++ Y ++G + +A + F + E+N SW +I ++A+ G D+A++++
Sbjct: 398 VGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQT 457
Query: 363 -----------------QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
Q +L + PNV++W+A+I + NG +EA DLF+KM +
Sbjct: 458 VATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPV 517
Query: 406 AKVVANSVTISGL-------------------------------LSVCAESAALNIGREI 434
+ + I+G LS CA + IGR I
Sbjct: 518 KNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVI 577
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
H ++ N V NGL++MY KCG +E+G VF I KD ++WNS+ISG N +
Sbjct: 578 HSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYML 637
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF-DMMVREFRIEPQMEHYA 553
++A FE+M K D V++ A++SA AG +F DM+ R I+P
Sbjct: 638 DDARVVFEKMP----KRDVVSWTAIISAYVQAGHGEVALDLFLDMLAR--GIKPNQLTVT 691
Query: 554 CMVDLLGRAGLLQ 566
++ G G ++
Sbjct: 692 SLLSACGNLGAIK 704
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 156/338 (46%), Gaps = 35/338 (10%)
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
+ ++F N I G+ G V+ A+ +F+E+ ++++VSWN++I Y++ G DEA +F
Sbjct: 168 QTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFD- 226
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
+ N+ +W+ ++ +A GR EEA ++F M VV+ + ISG +
Sbjct: 227 -------AFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYV---- 275
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
++ L R++ + KN+ N ++ Y C + E +F+Q+ +++ ++W
Sbjct: 276 QNGDLKNARKLFDEMPE----KNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMV 331
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM--VR 541
MISGY A F +M +PD FV VLSA + G +++ +R
Sbjct: 332 MISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAIT-------GLDDLELIGSLR 384
Query: 542 EFRIEPQMEHY----ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNT 597
I+ E + +++ R G L A + MP E N Y W T++ +
Sbjct: 385 PIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMP-ERNEYSWTTMIAAFAQCGRL 443
Query: 598 DVAEAMASQIFGLITE-TTGSYMLLSNIYAASGRWEDA 634
D A Q++ + E T + + YA GR + A
Sbjct: 444 DD----AIQLYERVPEQTVATKTAMMTAYAQVGRIQKA 477
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 182/411 (44%), Gaps = 65/411 (15%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGR------------ 78
F L C I + + +H+ I TG ++++ ++S+YA+ G
Sbjct: 558 FTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIR 617
Query: 79 -------------------LFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKL 119
L DAR VFE P K + W +I+ V G E AL L
Sbjct: 618 VKDTVSWNSLISGLSENYMLDDARVVFEKMP---KRDVVSWTAIISAYVQAGHGEVALDL 674
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
++ M G+ + T ++ AC +G+ + G+ H + ++GF + + N LI
Sbjct: 675 FLDMLARGIKPNQLTVTSLLSACGNLGAIK----LGEQFHALIFKLGFDTFLFVGNSLIT 730
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MY K G D F +F+++ + I+WN + G A N A+++F++ME+EG+ P+ ++
Sbjct: 731 MYFKCG-YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMS 789
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL--AADHMGK---VI 294
+ +L + + G ++E F+ M ++ G + + DL A ++ + +I
Sbjct: 790 FLGVLCACSHAGLVDEGWAHFNSMTQK---YGIMPLVYHYTCMVDLLGRAGYLSEAEALI 846
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDV----KVAQNLFSEIEEKNIVSWNALITSYAE 350
+K D V + AL+ H +V +VA+ LF + K+ ++ L +A
Sbjct: 847 ENMPVK---PDSV-IWEALLGACRIHRNVELGQRVAERLFQMTKPKS-ATYVLLSNLFAS 901
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV---IGAFASNGRGEEALD 398
G+ D+ E+ ++ D G + P ISW V + F + R + ++
Sbjct: 902 QGMWDKVAEIRKLMK--DQGLTKEPG-ISWIQVKNKLHCFVTGDRTHDQIE 949
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 231/753 (30%), Positives = 382/753 (50%), Gaps = 115/753 (15%)
Query: 15 SNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA 74
+ P+ + + Y++ + DC D + + K +H Q+I G N A+L ++L +YA
Sbjct: 63 TKPASDVNPLPYSSLIQDCID-----SNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYA 117
Query: 75 RFGRLFD---ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
R G L D AR +FE P + + WN+++ Y A ++ +M K+GV D
Sbjct: 118 RSGCLDDLCYARKLFEEMP---ERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPD 174
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
FTF +R C G+ R R G+ VH+ ++ GF+G+ + N LI MYAK
Sbjct: 175 NFTFASALRVC---GALRSR-DGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCL 230
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME--LEGLEPNFVTWTSLLSSHAR 249
K+FD++ +N ++WN + S A + AL LF RM+ +G++P+ T+T+L
Sbjct: 231 KVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTL------ 284
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFV 309
L++CA+ D+ G+ IH +I+ + V
Sbjct: 285 -----------------------------LTLCANQRNDNQGRQIHAHLIRANITKNIIV 315
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
+ L+ +Y + G + A+ +F+ + E+N SWN++I Y + G EA+ +F Q++ L+G
Sbjct: 316 ETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQ-LNG 374
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC-----AE 424
+P+ S S+++ + S ++ +L +V N++ G+L V A+
Sbjct: 375 ---IKPDCFSLSSMLSSCVSLSDSQKGRELHN-----FIVRNTMEEEGILQVVLVDMYAK 426
Query: 425 SAALNIGREIHGHVVRVSMNK--------------------------------------- 445
+++ +++ ++ N
Sbjct: 427 CGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMV 486
Query: 446 ---NILV-QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
N+LV + L++MY KCG + + VF+ + K++++WN+MISGY +G + AL +
Sbjct: 487 TIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILY 546
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
EEM + G P+ V F+A+LSACSH GLV EG RIF M ++ IE + EHY CMVDLLGR
Sbjct: 547 EEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGR 606
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLL 621
AG L++A + V+ MP+EP WG LL +CR+HK+ D+ A ++F L + G Y+++
Sbjct: 607 AGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIM 666
Query: 622 SNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVL 681
SNIYAA+GRW++ +R K KG+KK G SWIE+ +I +F +G+ + + L
Sbjct: 667 SNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNL 726
Query: 682 EELALQMENKGCVPDNDIILWEMMGKKNVKRIQ 714
L LQ + G +PD IL +NVK I+
Sbjct: 727 RHLTLQSKGLGYIPDTSFIL------QNVKDIK 753
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 384 bits (987), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/708 (31%), Positives = 377/708 (53%), Gaps = 55/708 (7%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F H+LQ I + VH Q+I G + +L +++ YA+ G L A +VF+ P
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 91 F------------------------------DCKSSSLLWNSILRVNVSNGLYENALKLY 120
DC S W +I+ GL++NA+ ++
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVS--WTAIIVGYNQFGLFDNAIWMF 130
Query: 121 VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
KM V FT V+ +C + G+ +H+ V+++G V + L+ M
Sbjct: 131 AKMISERVPPSQFTVSNVLSSC----AANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNM 186
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
YAK G + +FD++ VKN +WN + S + + + A F++M + + V+W
Sbjct: 187 YAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMP----DRDIVSW 242
Query: 241 TSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
S++S +++ G E + +F M+ + ++ +A +LS CA+L ++GK IH +++
Sbjct: 243 NSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYIL 302
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLF--SEIEEKNIVSWNALITSYAEAGLCDEA 357
+ E V NALI +Y K G V++A+ + + NI+++ +L+ Y + G A
Sbjct: 303 RAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPA 362
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
E+F++L D V++W+A+I + NG +AL+LFR M NS T++
Sbjct: 363 REIFNKLRDRD--------VVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAA 414
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE-KK 476
+LSV + L G++IH ++ + V N L+ MY K G + VF+ KK
Sbjct: 415 MLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKK 474
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
++++W SMI +GLG+ A+ FE M+ G KPD + +V VLSAC+H GLV +GR+ +
Sbjct: 475 EIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYY 534
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
+MM IEP + HYACM+DL GRAGLLQEA +++MP+EP+ WG+LL SC++HKN
Sbjct: 535 NMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKN 594
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
D+A+ A ++ + +G+Y+ L+N+Y+A G+WE+AA+ R K +G++K G SWI
Sbjct: 595 ADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIH 654
Query: 657 VKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+K ++H F + + + +++ E+ +++ G +PD + +L ++
Sbjct: 655 IKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDL 702
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/311 (29%), Positives = 153/311 (49%), Gaps = 45/311 (14%)
Query: 268 IEVG-----AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
+EVG +E A +L + G+ +H +IK G V++ N L+ Y K G
Sbjct: 1 MEVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS 60
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
++ A ++F E+ K+ SWN LI+ YA+ G + + + ++ D +SW+A
Sbjct: 61 LRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDP--------VSWTA 112
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS 442
+I + G + A+ +F KM +V + T+S +LS CA + L+IGR+IH VV++
Sbjct: 113 IIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLG 172
Query: 443 MNKNILVQNGLLNMYMKCG--------------------------CLEEGHL-----VFE 471
+ + V LLNMY KCG ++ G FE
Sbjct: 173 LGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFE 232
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMI-EAGFKPDGVAFVAVLSACSHAGLVN 530
++ +D+++WNSMISGY G ALA F +M+ E KPD ++LSAC++ +N
Sbjct: 233 KMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLN 292
Query: 531 EGRRIFDMMVR 541
G++I ++R
Sbjct: 293 IGKQIHAYILR 303
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 232/716 (32%), Positives = 368/716 (51%), Gaps = 93/716 (12%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F LL C ++ + VH ++++T + F+ R++ +Y + L DAR +F+ P
Sbjct: 18 FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77
Query: 91 FDCKSSSLLWNSILRVNVSNGL-------------------------------YENALKL 119
+ ++ WNS++ V +G +E +L+
Sbjct: 78 ---QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEY 134
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
+VKM + L + ++F + AC + + G VH V + + +V++ + LI
Sbjct: 135 FVKMHREDFLLNEYSFGSALSACAGL----MDLNMGTQVHALVSKSRYSTDVYMGSALID 190
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MY+K G ++ + ++F + +N ++WN + + + N ALE+F RM GLEP+ VT
Sbjct: 191 MYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVT 250
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
+A V+S CA L A G IH V+
Sbjct: 251 -----------------------------------LASVVSACASLCALKEGLQIHARVV 275
Query: 300 KGG-FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
K F D + + NAL+ +Y K V A+ +F + +N+VS ++++ YA A A
Sbjct: 276 KTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAAR 335
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
+FS+ M + NV+SW+A+I + NG EEAL LFR ++ + T L
Sbjct: 336 FMFSK--------MTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNL 387
Query: 419 LSVCAESAALNIGREIHGHVVRVSM------NKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
LS CA A L +GR+ H HV++ +I V N L++MYMKCG +E+G VFE+
Sbjct: 388 LSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEK 447
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
++++D ++WN++I GY NG G AL F +M+ G KPD V + VL ACSHAGLV EG
Sbjct: 448 MKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEG 507
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
R F M E + P +HY CMVDLLGRAG L EA ++++ MP+ P+A VWG+LL +C+
Sbjct: 508 RHYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACK 566
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
+H N ++ + A ++ + +G Y+LLSN+YA GRW D +VR + +G+ K G
Sbjct: 567 VHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGC 626
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD-NDIILWEMMGK 707
SWIEV+ ++H+F + K + VL+ L QM+ G +PD ND ++ K
Sbjct: 627 SWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDANDFEAYDEQSK 682
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 126/247 (51%), Gaps = 21/247 (8%)
Query: 28 NSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
N+L+D + +C +++ ++V +++ + + + +S YAR + AR +F
Sbjct: 288 NALVDMY----AKCSKVNEARRVFDRMSIRNVVSETSM----VSGYARAASVKAARFMFS 339
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
+ + + WN+++ NG E AL+L+ +++ + +TF ++ AC +
Sbjct: 340 KMT---QRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLAD 396
Query: 148 FRFRFSFGQIVHNHVLQMGFQ------GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
G+ H HVL+ GF+ ++ + N LI MY K G + D ++F+K++ ++
Sbjct: 397 LLL----GRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERD 452
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
+SWN + G+A N AL++F++M + G +P+ VT +L + + G +EE F
Sbjct: 453 CVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFF 512
Query: 262 MMRKRGI 268
M + G+
Sbjct: 513 SMEEHGL 519
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 35/226 (15%)
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+ NS + LL C S + R +H ++ + I +QN L+++Y KC CL++
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 469 VFEQIEKK-------------------------------DLITWNSMISGYGMNGLGENA 497
+F+++ ++ D +WNSM+SG+ + E +
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
L F +M F + +F + LSAC+ +N G ++ +V + R + + ++D
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVH-ALVSKSRYSTDVYMGSALID 190
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+ + G + A ++ M +E N W +L+ +C +N +EA+
Sbjct: 191 MYSKCGSVACAEEVFSGM-IERNLVTWNSLI-TC-YEQNGPASEAL 233
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/708 (31%), Positives = 377/708 (53%), Gaps = 55/708 (7%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F H+LQ I + VH Q+I G + +L +++ YA+ G L A +VF+ P
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 91 F------------------------------DCKSSSLLWNSILRVNVSNGLYENALKLY 120
DC S W +I+ GL++NA+ ++
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVS--WTAIIVGYNQFGLFDNAIWMF 130
Query: 121 VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
KM V FT V+ +C + G+ +H+ V+++G V + L+ M
Sbjct: 131 AKMISERVPPSQFTVSNVLSSC----AANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNM 186
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
YAK G + +FD++ VKN +WN + S + + + A F++M + + V+W
Sbjct: 187 YAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMP----DRDIVSW 242
Query: 241 TSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
S++S +++ G E + +F M+ + ++ +A +LS CA+L ++GK IH +++
Sbjct: 243 NSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYIL 302
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLF--SEIEEKNIVSWNALITSYAEAGLCDEA 357
+ E V NALI +Y K G V++A+ + + NI+++ +L+ Y + G A
Sbjct: 303 RAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPA 362
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
E+F++L D V++W+A+I + NG +AL+LFR M NS T++
Sbjct: 363 REIFNKLRDRD--------VVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAA 414
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE-KK 476
+LSV + L G++IH ++ + V N L+ MY K G + VF+ KK
Sbjct: 415 MLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKK 474
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
++++W SMI +GLG+ A+ FE M+ G KPD + +V VLSAC+H GLV +GR+ +
Sbjct: 475 EIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYY 534
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
+MM IEP + HYACM+DL GRAGLLQEA +++MP+EP+ WG+LL SC++HKN
Sbjct: 535 NMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKN 594
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
D+A+ A ++ + +G+Y+ L+N+Y+A G+WE+AA+ R K +G++K G SWI
Sbjct: 595 ADLAKVAAERLLLIDPGNSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKEKGISWIH 654
Query: 657 VKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+K ++H F + + + +++ E+ +++ G +PD + +L ++
Sbjct: 655 IKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKMGFIPDTESVLHDL 702
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 152/311 (48%), Gaps = 45/311 (14%)
Query: 268 IEVG-----AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
+EVG +E A +L + G+ +H +IK G V++ N L+ Y K G
Sbjct: 1 MEVGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGS 60
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
++ A ++F E+ K+ SWN LI+ YA+ G + + + ++ D +SW+A
Sbjct: 61 LRFAHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDP--------VSWTA 112
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS 442
+I + G + A+ +F KM +V + T+S +LS CA + L+IGR+IH VV++
Sbjct: 113 IIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLG 172
Query: 443 MNKNILVQNGLLNMYMKCG--------------------------CLEEGHL-----VFE 471
+ + V LLNMY KCG ++ G FE
Sbjct: 173 LGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFE 232
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMI-EAGFKPDGVAFVAVLSACSHAGLVN 530
++ +D+++WNSMISGY G AL F +M+ E KPD ++LSAC++ +N
Sbjct: 233 KMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLN 292
Query: 531 EGRRIFDMMVR 541
G++I ++R
Sbjct: 293 IGKQIHAYILR 303
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 227/713 (31%), Positives = 369/713 (51%), Gaps = 67/713 (9%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C T L K +H+ + G ++ + ++S+YAR G L AR +F T P
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMP--- 392
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K + WN+I+ A++LY +M+ GV TF ++ AC ++ +
Sbjct: 393 KRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAY----A 448
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+++H +L+ G + N H+ N L+ MY + G + ++ +F+ + ++ ISWN M +G A
Sbjct: 449 DGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHA 508
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSS--------------------------- 246
+ + A +LF+ M+ E LEP+ +T+ S+LS
Sbjct: 509 QHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVN 568
Query: 247 --------HARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI---- 294
+ RCG L++ ++F ++ R + + ++ CAD D +
Sbjct: 569 LGNALINMYIRCGSLQDARNVFHSLQHRDVM----SWTAMIGGCADQGEDMKAIELFWQM 624
Query: 295 --HGF-VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEA 351
GF +K F + V + C+ G +A L S E V NALI++Y+++
Sbjct: 625 QNEGFRPVKSTFSSILKVCTSSACL--DEGKKVIAYILNSGYELDTGVG-NALISAYSKS 681
Query: 352 GLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVAN 411
G +A EVF ++ D ++SW+ +I +A NG G+ A++ +MQ VV N
Sbjct: 682 GSMTDAREVFDKMPSRD--------IVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPN 733
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
+ LL+ C+ +AL G+ +H +V+ + ++ V L++MY KCG E VF+
Sbjct: 734 KFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFD 793
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
I +K+++TWN+MI+ Y +GL AL F M + G KPDG F ++LSAC+HAGLV E
Sbjct: 794 NIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLE 853
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
G +IF M E+ + P +EHY C+V LLGRA QEA ++ MP P+A VW TLL +C
Sbjct: 854 GYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGAC 913
Query: 592 RMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
R+H N +AE A+ L Y+LLSN+YAA+GRW+D AK+R + +G++K G
Sbjct: 914 RIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPG 973
Query: 652 QSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+SWIEV IH F + + + + L+ L+++ME G PD +L ++
Sbjct: 974 RSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDL 1026
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 162/637 (25%), Positives = 289/637 (45%), Gaps = 75/637 (11%)
Query: 1 MRHSLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQC---KTIHQLKQVHNQLIVT 57
MR+ P + SN +P T + + LLQ C + + + K++H Q++
Sbjct: 1 MRNERHCGPDREDVSNTHQPRPTETERATYVA----LLQNCTRKRLLPEAKRIHAQMVEA 56
Query: 58 GANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENAL 117
FL+ ++++Y + + DA VF+ P + + WNS++ G + A
Sbjct: 57 WVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMP---RRDVISWNSLISCYAQQGFKKKAF 113
Query: 118 KLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNEL 177
+L+ +M+ G + + T+ ++ AC G+ +H+ +++ G+Q + + N L
Sbjct: 114 QLFEEMQNAGFIPNKITYISILTACYSPA----ELENGKKIHSQIIKAGYQRDPRVQNSL 169
Query: 178 IGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNF 237
+ MY K G + + ++F + ++ +S+N M +A L LF +M EG+ P+
Sbjct: 170 LSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDK 229
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRG----IEVGAEAIAVVLSVCADLAADHMGKV 293
VT+ +LL + L+E + + + G I VG A+ + C D+ +
Sbjct: 230 VTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGT-ALVTMCVRCGDVDSAKQ--- 285
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGD------------------------------- 322
KG + V V NALI +HG
Sbjct: 286 ----AFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACS 341
Query: 323 ----VKVAQNLFSEIEE----KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
++ + + S I E ++ NALI+ YA G +A E+F + K D
Sbjct: 342 TSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRD------ 395
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
+ISW+A+I +A EA+ L+++MQ V VT LLS CA S+A G+ I
Sbjct: 396 --LISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMI 453
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
H ++R + N + N L+NMY +CG L E VFE + +D+I+WNSMI+G+ +G
Sbjct: 454 HEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSY 513
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
E A F+EM +PD + F +VLS C + + G++I + E ++ +
Sbjct: 514 ETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHG-RITESGLQLDVNLGNA 572
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
++++ R G LQ+A ++ ++ + W ++ C
Sbjct: 573 LINMYIRCGSLQDARNVFHSL-QHRDVMSWTAMIGGC 608
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 137/557 (24%), Positives = 259/557 (46%), Gaps = 95/557 (17%)
Query: 24 ITYNNSLLDCF--DHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFD 81
+TY N LLD F +L + K IH+L + G N+ + ++++ R G +
Sbjct: 230 VTYIN-LLDAFTTPSMLDEGKRIHKLT------VEEGLNSDIRVGTALVTMCVRCGDVDS 282
Query: 82 ARNVFE-TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR 140
A+ F+ TA D +++N+++ +G A + Y +MR GV + T+ ++
Sbjct: 283 AKQAFKGTADRDV----VVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILN 338
Query: 141 ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
AC S G+++H+H+ + G +V I N LI MYA+ G
Sbjct: 339 AC----STSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCG--------------- 379
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
D A ELF M L ++W ++++ +AR E M L+
Sbjct: 380 ----------------DLPKARELFYTMPKRDL----ISWNAIIAGYARREDRGEAMRLY 419
Query: 261 DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
M+ G++ G +LS CA+ +A GK+IH +++ G + + NAL+ +Y +
Sbjct: 420 KQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRC 479
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
G + AQN+F G+ R +VISW
Sbjct: 480 GSLMEAQNVFE--------------------------------------GTQAR-DVISW 500
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+++I A +G E A LF++MQ ++ +++T + +LS C AL +G++IHG +
Sbjct: 501 NSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITE 560
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
+ ++ + N L+NMY++CG L++ VF ++ +D+++W +MI G G A+
Sbjct: 561 SGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIEL 620
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHYACMVDLL 559
F +M GF+P F ++L C+ + ++EG+++ ++ + ++ + + ++
Sbjct: 621 FWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGN--ALISAY 678
Query: 560 GRAGLLQEASDIVKNMP 576
++G + +A ++ MP
Sbjct: 679 SKSGSMTDAREVFDKMP 695
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 129/581 (22%), Positives = 248/581 (42%), Gaps = 136/581 (23%)
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
A ++FK M + ++W SL+S +A+ G ++ LF+ M+ G +L+
Sbjct: 81 AHQVFKEMPRR----DVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILT 136
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
C A GK IH +IK G++ V+N+L+ +YGK GD+ A+ +F+ I +++VS
Sbjct: 137 ACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVS 196
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
+N ++ YA+ E + +F Q+ +G S P+ +++ ++ AF + +E +
Sbjct: 197 YNTMLGLYAQKAYVKECLGLFGQMSS-EGIS---PDKVTYINLLDAFTTPSMLDEGKRI- 251
Query: 401 RKMQLAKVVANSVTI-SGLLSVCAESAALNIGREI---------------------HGHV 438
K+ + + + + + + + L+++C ++ ++ HGH
Sbjct: 252 HKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHN 311
Query: 439 VR------------VSMNK---------------------------------NILVQNGL 453
V V++N+ ++ + N L
Sbjct: 312 VEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNAL 371
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY +CG L + +F + K+DLI+WN++I+GY A+ +++M G KP
Sbjct: 372 ISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGR 431
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI-- 571
V F+ +LSAC+++ +G+ I + ++R I+ ++++ R G L EA ++
Sbjct: 432 VTFLHLLSACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFE 490
Query: 572 --------------------------------VKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
++N +EP+ + ++L+ C KN +
Sbjct: 491 GTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGC---KNPEA 547
Query: 600 AEAMASQIFGLITETTGSYML-----LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
E + QI G ITE+ + L N+Y G +DA V S + + + SW
Sbjct: 548 LE-LGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDV-----MSW 601
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
M D+K + EL QM+N+G P
Sbjct: 602 TA------MIGGCADQGEDMKAI-----ELFWQMQNEGFRP 631
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 120/233 (51%), Gaps = 10/233 (4%)
Query: 34 FDHLLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + + + K+V ++ +G + ++S Y++ G + DAR VF+ P
Sbjct: 636 FSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMP 695
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ WN I+ NGL + A++ +M++ V+ + F+F ++ AC +
Sbjct: 696 ---SRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEE 752
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ VH +++ QG+V + LI MYAK G ++ ++FD + KN ++WN M +
Sbjct: 753 ----GKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMIN 808
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
+A + AL F ME EG++P+ T+TS+LS+ G + E +F M
Sbjct: 809 AYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSM 861
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/625 (33%), Positives = 353/625 (56%), Gaps = 48/625 (7%)
Query: 71 SIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG 130
S+ A + +L+ + E + + WN ++ +G AL L V+M + GV
Sbjct: 209 SMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRL 268
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
D T+ + AC + F +G+ +H V++ Q + ++ + LI +YAK G ++
Sbjct: 269 DSTTYTSSLTACARL----FSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 324
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
++F+ ++ +N +SW ++ G +L ++C
Sbjct: 325 KRVFNSLQDRNSVSWTVLIGG-SLQYEC-------------------------------- 351
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
++++LF+ MR + + A+A ++S C + +G+ +H +K G + V
Sbjct: 352 --FSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVS 409
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
N+LI +Y K GD++ A+ +FS + E++IVSW ++IT+Y++ G +A E F DG
Sbjct: 410 NSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFF------DG- 462
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK-VVANSVTISGLLSVCAESAALN 429
M+ N I+W+A++GA+ +G E+ L ++ M K V + VT L CA+ A
Sbjct: 463 -MDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANK 521
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
+G +I GH V+ + N+ V N + MY KCG + E +F+ + KD+++WN+MI+GY
Sbjct: 522 LGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYS 581
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
+G+G+ A TF++M+ G KPD +++VAVLS CSH+GLV EG+ FDMM R I P +
Sbjct: 582 QHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGL 641
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
EH++CMVDLLGRAG L EA D++ MPM+P A VWG LL++C++H N ++AE A +F
Sbjct: 642 EHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFE 701
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
L + +GSYMLL+ IY+ +G+ +D+A+VR + KG+KK G SW+EV+ K+H+F + +
Sbjct: 702 LDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDV 761
Query: 670 LQSDLKNVCEVLEELALQMENKGCV 694
+ + L+EL ++ + G V
Sbjct: 762 SHPQVIAIRNKLDELMEKIAHLGYV 786
Score = 145 bits (367), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 207/455 (45%), Gaps = 20/455 (4%)
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD-K 196
+R+C G+ + + +H ++ +G V + N L+ Y G +SD+ +L
Sbjct: 10 ALRSCGSRGAL----AGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
++ N I+ N+M +G+A A ELF RM + +W +L+S + + R +
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP----RRDVASWNTLMSGYFQARRFLDG 121
Query: 257 MDLFDMMRKRGIEV-GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
++ F M + G + A V+ C L + + G K F V+ AL+
Sbjct: 122 LETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVD 181
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
++ + G V A LFS+IE I N+++ YA+ D A+E F + + D
Sbjct: 182 MFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERD------- 234
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH 435
V+SW+ +I A + +GR EAL L +M V +S T + L+ CA +L G+++H
Sbjct: 235 -VVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLH 293
Query: 436 GHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
V+R + V + L+ +Y KCG +E VF ++ ++ ++W +I G
Sbjct: 294 AKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFS 353
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
++ F +M D A ++S C + + GR++ + ++ + + +
Sbjct: 354 KSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS-L 412
Query: 556 VDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
+ L + G LQ A + +M E + W +++ +
Sbjct: 413 ISLYAKCGDLQNAEFVFSSMS-ERDIVSWTSMITA 446
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 187/380 (49%), Gaps = 21/380 (5%)
Query: 25 TYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
TY +SL C + ++ KQ+H ++I + ++A+ ++ +YA+ G +A+
Sbjct: 272 TYTSSLTAC-----ARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKR 326
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
VF + +S+ W ++ ++ + +++L+ +MR + D F +I C
Sbjct: 327 VFNSLQ---DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC-- 381
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
R G+ +H+ L+ G + + N LI +YAK G + ++ +F + ++ +S
Sbjct: 382 --FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVS 439
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MM 263
W M + ++ + A E F M+ N +TW ++L ++ + G E+ + ++ M+
Sbjct: 440 WTSMITAYSQIGNIIKAREFFDGMDTR----NAITWNAMLGAYIQHGAEEDGLKMYSAML 495
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
++ + + CAD+ A+ +G I G +K G V V NA I +Y K G +
Sbjct: 496 SQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRI 555
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
AQ LF + K++VSWNA+IT Y++ G+ +A + F + L G+ +P+ IS+ AV
Sbjct: 556 SEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDM--LSKGA--KPDYISYVAV 611
Query: 384 IGAFASNGRGEEALDLFRKM 403
+ + +G +E F M
Sbjct: 612 LSGCSHSGLVQEGKLYFDMM 631
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 163/321 (50%), Gaps = 20/321 (6%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM-RKLG 127
+++ Y++ G + AR F+ D +++ + WN++L + +G E+ LK+Y M +
Sbjct: 443 MITAYSQIGNIIKAREFFDG--MDTRNA-ITWNAMLGAYIQHGAEEDGLKMYSAMLSQKD 499
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
V D T+ + R C +G+ + G + H ++ G NV + N I MY+K G++
Sbjct: 500 VTPDWVTYVTLFRGCADIGANKL----GDQIIGHTVKAGLILNVSVANAAITMYSKCGRI 555
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
S++ KLFD + K+ +SWN M +G++ + A + F M +G +P+++++ ++LS
Sbjct: 556 SEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGC 615
Query: 248 ARCGRLEETMDLFDMM-RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY 306
+ G ++E FDMM R GI G E + ++ + A H+ + + K +
Sbjct: 616 SHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLG--RAGHLTEA-KDLIDKMPMKPT 672
Query: 307 VFVKNALICVYGKHGDVKVAQ----NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
V AL+ HG+ ++A+ ++F E++ + S+ L Y++AG D++ +V
Sbjct: 673 AEVWGALLSACKIHGNDELAELAAKHVF-ELDSPDSGSYMLLAKIYSDAGKSDDSAQVRK 731
Query: 363 QLEKLDGGSMERPNVISWSAV 383
+ D G + P SW V
Sbjct: 732 LMR--DKGIKKNPGY-SWMEV 749
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 169/390 (43%), Gaps = 56/390 (14%)
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF-S 331
+A+A L C A + +HG ++ G VF++N L+ Y G + A+ L +
Sbjct: 5 QALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRA 64
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+I+E N+++ N ++ YA+ G +A E+F + M R +V SW+ ++ +
Sbjct: 65 DIKEPNVITHNIMMNGYAKQGSLSDAEELFDR--------MPRRDVASWNTLMSGYFQAR 116
Query: 392 RGEEALDLFRKMQLA-KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
R + L+ F M + + N+ T ++ C + ++ G + + V+
Sbjct: 117 RFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE 176
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEK-------------------------------KDLI 479
L++M+++CG ++ +F QIE+ +D++
Sbjct: 177 TALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVV 236
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN MI+ +G AL EM G + D + + L+AC+ + G+++ +
Sbjct: 237 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKV 296
Query: 540 VREFRIEPQMEHY--ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK-- 595
+R PQ++ Y + +++L + G +EA + ++ + N+ W L+ ++
Sbjct: 297 IRSL---PQIDPYVASALIELYAKCGSFKEAKRVFNSL-QDRNSVSWTVLIGGSLQYECF 352
Query: 596 -------NTDVAEAMASQIFGLITETTGSY 618
N AE MA F L T +G +
Sbjct: 353 SKSVELFNQMRAELMAIDQFALATLISGCF 382
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 37/214 (17%)
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL----- 463
+A + ++ L C AL R +HG +V V + + +QN LL+ Y CG L
Sbjct: 1 MAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARR 60
Query: 464 ----------------------EEGHL-----VFEQIEKKDLITWNSMISGYGMNGLGEN 496
++G L +F+++ ++D+ +WN+++SGY +
Sbjct: 61 LLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLD 120
Query: 497 ALATFEEMIEAGFK-PDGVAFVAVLSACSHAGLVNEGRRIFDMMVR-EFRIEPQMEHYAC 554
L TF M +G P+ F V+ +C G ++ + + +F +P +E
Sbjct: 121 GLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TA 178
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+VD+ R G + AS + + P + ++L
Sbjct: 179 LVDMFVRCGYVDFASRLFSQIE-RPTIFCRNSML 211
>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01030, mitochondrial; Flags: Precursor
gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/683 (32%), Positives = 371/683 (54%), Gaps = 39/683 (5%)
Query: 50 VHNQLIVTG-ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
+H LI G N+ + + + Y R L A +F+ P K L WN I+ VN+
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMP---KRDDLAWNEIVMVNL 65
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+G +E A++L+ +M+ G T +++ C S + F+ G+ +H +VL++G +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVC----SNKEGFAEGRQIHGYVLRLGLE 121
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
NV + N LI MY++ G++ S K+F+ ++ +N SWN + S + D A+ L M
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E+ GL+P+ VTW SLLS +A G ++ + + M+ G++ +I+ +L A+
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+GK IHG++++ V+V+ LI +Y K G + A+ +F ++ KNIV+WN+L++
Sbjct: 242 KLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGL 301
Query: 349 AEAGLCDEAVEVFSQLEK--------------------------LD--GGSMER---PNV 377
+ A L +A + ++EK LD G E+ PNV
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNV 361
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
+SW+A+ + NG AL +F KMQ V N+ T+S LL + + L+ G+E+HG
Sbjct: 362 VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGF 421
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
+R ++ + V L++MY K G L+ +F I+ K L +WN M+ GY M G GE
Sbjct: 422 CLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEG 481
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
+A F M+EAG +PD + F +VLS C ++GLV EG + FD+M + I P +EH +CMVD
Sbjct: 482 IAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVD 541
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
LLGR+G L EA D ++ M ++P+A +WG L+SC++H++ ++AE ++ L + +
Sbjct: 542 LLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSAN 601
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
YM++ N+Y+ RWED ++R + ++ SWI++ + +H+F + D ++
Sbjct: 602 YMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDI 661
Query: 678 CEVLEELALQMENKGCVPDNDII 700
L +L +M+ G VPD I
Sbjct: 662 YFELYKLVSEMKKSGYVPDTSCI 684
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 195/438 (44%), Gaps = 78/438 (17%)
Query: 37 LLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF------- 86
LLQ C + +Q+H ++ G ++ + ++ +Y+R G+L +R VF
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
Query: 87 -------------------------ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYV 121
E K + WNS+L S GL ++A+ +
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLK 214
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
+M+ G+ + +++A G + G+ +H ++L+ +V++ LI MY
Sbjct: 215 RMQIAGLKPSTSSISSLLQAVAEPGHLK----LGKAIHGYILRNQLWYDVYVETTLIDMY 270
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
K G + + +FD + KN ++WN + SG + A L RME EG++P+ +TW
Sbjct: 271 IKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWN 330
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD----------------- 284
SL S +A G+ E+ +D+ M+++G+ + + S C+
Sbjct: 331 SLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
Query: 285 ------------------LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
L+ H GK +HGF ++ +V AL+ +YGK GD++ A
Sbjct: 391 GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSA 450
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+F I+ K++ SWN ++ YA G +E + FS + L+ G ME P+ I++++V+
Sbjct: 451 IEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVM--LEAG-ME-PDAITFTSVLSV 506
Query: 387 FASNGRGEEALDLFRKMQ 404
++G +E F M+
Sbjct: 507 CKNSGLVQEGWKYFDLMR 524
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 206/604 (34%), Positives = 335/604 (55%), Gaps = 46/604 (7%)
Query: 69 VLSIYARFGRLFDARNVF-ETAPF-DCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL 126
++S YA+ G+ +A F E D K + + W +++ + NG AL ++ KM
Sbjct: 297 IISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLE 356
Query: 127 GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG-FQGNVHIVNELIGMYAKMG 185
GV + T + AC + R G+ +H + +++ ++ + N L+ YAK
Sbjct: 357 GVKPNSITIASAVSACTNLSLLRH----GREIHGYCIKVEELDSDLLVGNSLVDYYAKCR 412
Query: 186 QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
+ + + F ++ + +SWN M +G+AL + A+EL M+ +G+EP+ +TW L++
Sbjct: 413 SVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVT 472
Query: 246 SHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
+ G + ++ F M G++ I+ L+ C + +GK IHG+V++ E
Sbjct: 473 GFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIEL 532
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
V +ALI +Y ++VA VFS+L
Sbjct: 533 STGVGSALISMYSGCDSLEVA-------------------------------CSVFSELS 561
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
D V+ W+++I A A +GR ALDL R+M L+ V N+VT+ L C++
Sbjct: 562 TRD--------VVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKL 613
Query: 426 AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMI 485
AAL G+EIH ++R ++ + N L++MY +CG +++ +F+ + ++DL++WN MI
Sbjct: 614 AALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMI 673
Query: 486 SGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRI 545
S YGM+G G +A+ F+ G KP+ + F +LSACSH+GL+ EG + F MM E+ +
Sbjct: 674 SVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAM 733
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMAS 605
+P +E YACMVDLL RAG E + ++ MP EPNA VWG+LL +CR+H N D+AE A
Sbjct: 734 DPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAAR 793
Query: 606 QIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFS 665
+F L +++G+Y+L++NIY+A+GRWEDAAK+R K +G+ K G SWIEVKRK+H F
Sbjct: 794 YLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFV 853
Query: 666 SGNS 669
G++
Sbjct: 854 VGDT 857
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 176/611 (28%), Positives = 318/611 (52%), Gaps = 53/611 (8%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLF 80
+T + ++ + +LQ+C+ ++ L+ QVH QL+V G + FL +R+L +Y + G +
Sbjct: 82 LTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVE 141
Query: 81 DARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR 140
DAR +F+ + + W +I+ + G YE +KL+ M GV D F FP V +
Sbjct: 142 DARRMFDKMS---ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFK 198
Query: 141 ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
AC + ++R G+ V++++L +GF+GN + ++ M+ K G+M + + F+++ K
Sbjct: 199 ACSELKNYRV----GKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFK 254
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE------ 254
+ WN+M SG+ + AL+ M+L G++P+ VTW +++S +A+ G+ E
Sbjct: 255 DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYF 314
Query: 255 ------------------------------ETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
E + +F M G++ + IA +S C +
Sbjct: 315 LEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTN 374
Query: 285 LAADHMGKVIHGFVIK-GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
L+ G+ IHG+ IK + + V N+L+ Y K V+VA+ F I++ ++VSWNA
Sbjct: 375 LSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNA 434
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
++ YA G +EA+E+ S++ K G P++I+W+ ++ F G G+ AL+ F++M
Sbjct: 435 MLAGYALRGSHEEAIELLSEM-KFQG---IEPDIITWNGLVTGFTQYGDGKAALEFFQRM 490
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
+ N+ TISG L+ C + L +G+EIHG+V+R + + V + L++MY C L
Sbjct: 491 HSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSL 550
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
E VF ++ +D++ WNS+IS +G NAL EM + + + V V+ L AC
Sbjct: 551 EVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPAC 610
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
S + +G+ I ++R ++ ++D+ GR G +Q++ I MP + +
Sbjct: 611 SKLAALRQGKEIHQFIIR-CGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP-QRDLVS 668
Query: 584 WGTLLNSCRMH 594
W +++ MH
Sbjct: 669 WNVMISVYGMH 679
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/512 (22%), Positives = 216/512 (42%), Gaps = 96/512 (18%)
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
E A +L C L +G +H ++ G + F+ + L+ VY + G V+ A+ +F +
Sbjct: 90 EIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDK 149
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ E+N+ SW A++ Y GL G
Sbjct: 150 MSERNVFSWTAIMEMY--CGL-------------------------------------GD 170
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
EE + LF M V + + C+E +G++++ +++ + N V+
Sbjct: 171 YEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGS 230
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
+L+M++KCG ++ FE+IE KD+ WN M+SGY G + AL +M +G KPD
Sbjct: 231 ILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPD 290
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMM--VREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
V + A++S + +G E + F M +++F+ P + + ++ + G EA
Sbjct: 291 QVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFK--PNVVSWTALIAGSEQNGYDFEALS 348
Query: 571 IVKNMPME---PNAYVWGTLLNSCRMHKNTDVAEAMASQIFG--LITETTGSYMLLSNI- 624
+ + M +E PN+ + +++C N + +I G + E S +L+ N
Sbjct: 349 VFRKMVLEGVKPNSITIASAVSAC---TNLSLLRH-GREIHGYCIKVEELDSDLLVGNSL 404
Query: 625 --YAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLE 682
Y A R + A+ + +K+ SW + +G +L+ + E+L
Sbjct: 405 VDYYAKCRSVEVARRKFGM----IKQTDLVSW-------NAMLAGYALRGSHEEAIELLS 453
Query: 683 ELALQMENKGCVPDNDIILWEMM---------GKKNVKRIQRIRADNIKSKHRIVG---- 729
E+ Q G P DII W + GK ++ QR+ + + +
Sbjct: 454 EMKFQ----GIEP--DIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALA 507
Query: 730 ----FRNLKLGLRLLLSLRSTNGQLMKNKLKL 757
RNLKLG + +G +++N ++L
Sbjct: 508 ACGQVRNLKLG-------KEIHGYVLRNHIEL 532
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 112/254 (44%), Gaps = 5/254 (1%)
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
G+ NG A L M L + +L C + L +G ++H +V ++
Sbjct: 62 GSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVD 121
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
+ + LL +Y + GC+E+ +F+++ ++++ +W +++ Y G E + F M
Sbjct: 122 VCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLM 181
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+ G +PD F V ACS G+ ++D M+ E ++D+ + G
Sbjct: 182 VNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYML-SIGFEGNSCVKGSILDMFIKCGR 240
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMAS--QIFGLITETTGSYMLLS 622
+ A + + + + ++W +++ A S ++ G+ + ++S
Sbjct: 241 MDIARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIIS 299
Query: 623 NIYAASGRWEDAAK 636
YA SG++E+A+K
Sbjct: 300 G-YAQSGQFEEASK 312
>gi|359480813|ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vitis vinifera]
Length = 634
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/671 (33%), Positives = 355/671 (52%), Gaps = 85/671 (12%)
Query: 22 SIITYNNSLLDCF--DHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARF 76
S+ T N +LL F +HLLQ C K +HQ KQ+H +I+ G + F+ +++ +YA
Sbjct: 12 SLPTSNPNLLSSFQLNHLLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADC 71
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
G L A+ +F+ + + W +IL NGL + ++ Y +M+ GVL D + FP
Sbjct: 72 GDLGSAQALFDKLS---QPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFP 128
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
V RAC + G VH V+ G + ++ + N LI MY+K G + ++FD+
Sbjct: 129 KVFRACGQL----LWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDE 184
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW---------------- 240
+ ++ +SWN M SG+ N + ++EL M + G EP+ VTW
Sbjct: 185 MVERDVLSWNSMISGYVCNGFLEFSVELLASMRIRGFEPDMVTWNTVMDAYCRMGLCDEA 244
Query: 241 ---------------TSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCAD 284
T+L+S ++R G E+++ +F +MM +R ++++ VL C
Sbjct: 245 WEIFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVSCRH 304
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
L A G+ IHG+ I+ + F K+A AL
Sbjct: 305 LGALVCGQEIHGYGIRS-VDSSSFYKSA----------------------------GAAL 335
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+T Y + +A+ VF +++ D V++W+A+I F G AL+ F KMQ
Sbjct: 336 LTMYVKCKRIQDALNVFELMDRFD--------VVTWNAMILGFVDLEMGHLALECFSKMQ 387
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
+ ++ N +TIS +L C L G+++H ++ + S + I V N L++MY KCGC+
Sbjct: 388 RSGIMNNQITISTVLPACD----LKSGKQVHAYITKNSFSSVIPVWNALIHMYSKCGCIG 443
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
+ +F + +DL++WN+MI G+GM+GLG+ AL +M + P+ V F + LSACS
Sbjct: 444 TAYSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVCPNSVTFTSALSACS 503
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
H+GLV+EG +F M R+F P MEH++C+VDLL RA L++A ++ MP++P+ ++W
Sbjct: 504 HSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLLARADRLEDAVGFIEKMPLKPSKHIW 563
Query: 585 GTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTK 644
LL +CR +N VA+ A Q+F L E G+Y+ LSNIYA +GRW+DA VR + +
Sbjct: 564 SALLAACRAQQNVSVAKLAAEQLFQLEPEHAGNYVTLSNIYARAGRWDDAVAVRKLMEDR 623
Query: 645 GLKKVAGQSWI 655
GL K +G SWI
Sbjct: 624 GLVKPSGYSWI 634
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/670 (31%), Positives = 356/670 (53%), Gaps = 52/670 (7%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARF--GRLFDARNVFETAPFDCK 94
LL++CK+++QLKQ+H+ I G ++ RV++ G++ AR VF+ P +
Sbjct: 13 LLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIP---Q 69
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
+ +WN++++ +N + +Y+ M + D FTFP +++ + +
Sbjct: 70 PTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGF----TRNMALQY 125
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+++ NH ++ GF N+ + I M++ +L D R
Sbjct: 126 GKVLLNHAVKHGFDSNLFVQKAFIHMFSLC-------RLVDLARKV-------------- 164
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
FD A E+ VTW +LS + R + +++ LF M KRG+ +
Sbjct: 165 -FDMGDAWEV-------------VTWNIMLSGYNRVKQFKKSKMLFIEMEKRGVSPNSVT 210
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ ++LS C+ L GK I+ ++ G E + ++N LI ++ G++ AQ++F ++
Sbjct: 211 LVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSVFDNMK 270
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
++++SW +++T +A G D A + F Q+ + D +SW+A+I + R
Sbjct: 271 NRDVISWTSIVTGFANIGQIDLARKYFDQIPERD--------YVSWTAMIDGYLRMNRFI 322
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
EAL LFR+MQ++ V + T+ +L+ CA AL +G + ++ + S+ + V N L+
Sbjct: 323 EALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALI 382
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCG + + VF+++ KD TW +MI G +NG GE ALA F MIEA PD +
Sbjct: 383 DMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEI 442
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
++ VL AC+HAG+V +G+ F M + I+P + HY CMVDLLGRAG L+EA +++ N
Sbjct: 443 TYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVN 502
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP++PN+ VWG+LL +CR+HKN +AE A QI L E Y+LL NIYAA RWE+
Sbjct: 503 MPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENL 562
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
+VR +G+KK G S +E+ ++ F +G+ K + LE + + G
Sbjct: 563 RQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKLENMMQDLIKAGYS 622
Query: 695 PDNDIILWEM 704
PD + ++
Sbjct: 623 PDTSEVFLDL 632
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 234/706 (33%), Positives = 379/706 (53%), Gaps = 57/706 (8%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F+ L K +H L+V G S F++ R++++YA G + +R F+ P
Sbjct: 122 FNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP--- 178
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG-VLGDGFTFPLVIRACKFMGSFRFRF 152
+ WNS++ V NG + A+ + ++ + + D +TFP V++AC +
Sbjct: 179 QKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD----- 233
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H ++GFQ NV + LI MY++ G + LFD + ++ SWN M SG
Sbjct: 234 --GRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGL 291
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM-------------DL 259
N + AL++ M LEG++ NFVT S+L + G + M DL
Sbjct: 292 IQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDL 351
Query: 260 F------DMMRKRG-IEVGAEA-----IAVVLSVCADLAADHMGK---VIHGFVIK---G 301
F +M K G +E +A I V+S + +AA HGF +K
Sbjct: 352 FVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLN 411
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK-----NIVSWNALITSYAEAGLCDE 356
GF+ + +L + + D K ++++ I + ++V NA++ YA+ GL D
Sbjct: 412 GFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDS 471
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK-VVANSVTI 415
A +VF + D VISW+ +I +A NG EA+++++ M+ K ++ N T
Sbjct: 472 AHKVFEIILVKD--------VISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTW 523
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
+L A AL G IHG V++ +++ ++ V L+++Y KCG L + +F Q+ +
Sbjct: 524 VSILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ 583
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
+ +TWN++IS +G++G E L F EM++ G KPD V FV++LSACSH+G V EG+
Sbjct: 584 ESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWC 643
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
F +M +E+ I+P ++HY CMVDLLGRAG L+ A +K+MP++P+A +WG LL +CR+H
Sbjct: 644 FRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHG 702
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
N ++ + + ++F + ++ G Y+LLSNIYA G+WE KVR A+ +GLKK G S I
Sbjct: 703 NIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTI 762
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
EV RK+ +F +GN K + E L L +M++ G +PD +L
Sbjct: 763 EVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVL 808
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 237/724 (32%), Positives = 378/724 (52%), Gaps = 112/724 (15%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTG------ANASAFLAARVLSIYARFGRLFDARNVFETA 89
H L+ +H+ + +H L+V G ++S+F A++++++Y FG L A F
Sbjct: 35 HRLKSPPNLHEARTLHALLLVLGFFQPTCPHSSSF-ASQLVNVYVNFGSLQHAFLTFRAL 93
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
P + WN+ILR V+ G + A+ Y M + GV D +T+PLV++AC + + +
Sbjct: 94 P---HKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQ 150
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+ VH + + NV++ +I M+AK G + D+ ++F+++ ++ SW +
Sbjct: 151 L----GRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALI 205
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
G N +C AL LF++M EGL P+ V S+L + CGRLE
Sbjct: 206 CGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPA---CGRLE--------------- 247
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
A + + L VCA ++ GFE ++V NA+I +Y K GD A +
Sbjct: 248 --AVKLGMALQVCA---------------VRSGFESDLYVSNAVIDMYCKCGDPLEAHRV 290
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDE-------------------AVEVFSQLEKLD-- 368
FS + ++VSW+ LI Y++ L E A V L KL+
Sbjct: 291 FSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELL 350
Query: 369 --GGSMER--------PNVISWSAVIGAFASNGRGEEALDL------------------- 399
G M +V+ SA+I +A+ G +EA +
Sbjct: 351 KQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGY 410
Query: 400 ------------FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
FR++ A+ N +T+ +L +C + AL G+EIHG+V + + N+
Sbjct: 411 NLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNV 470
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
V N L++MY KCG LE G VF+Q+ +++ T+N+MIS G +G GE LA +E+M E
Sbjct: 471 SVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEE 530
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
G +P+ V F+++LSACSHAGL++ G +++ M+ ++ IEP MEHY+CMVDL+GRAG L
Sbjct: 531 GNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDG 590
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A + MPM P+A V+G+LL +CR+H ++ E +A +I L + +G Y+LLSN+YA+
Sbjct: 591 AYKFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYAS 650
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
RWED +KVR K KGL+K G SWI+V I++F + ++ + E L L L
Sbjct: 651 GKRWEDMSKVRSMIKDKGLEKKPGSSWIQVGHCIYVFHATSAFHPAFAKIEETLNSLLLV 710
Query: 688 MENK 691
M+++
Sbjct: 711 MKSE 714
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/665 (32%), Positives = 357/665 (53%), Gaps = 82/665 (12%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
+ K+ Q KQ+H Q I T + S A+ V+SIY L +A VF+T L
Sbjct: 17 RIKSKSQAKQLHAQFIRT-QSLSHTSASIVISIYTNLKLLHEALLVFKTLE---SPPVLA 72
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
W S++R L+ AL +V+MR G D FP V+++C M RF G+ VH
Sbjct: 73 WKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRF----GESVH 128
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
++++G +++ N L+ MY+K+ + K+F+ + K+ +S+N + +G+A + +
Sbjct: 129 GFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYE 188
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
AL + + M L+P+ T +S+L E +D+
Sbjct: 189 DALRMVREMGTSDLKPDAFTLSSVLPI------FSEYVDVLK------------------ 224
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
GK IHG+VI+ G + V++ ++L+ +Y K +
Sbjct: 225 -----------GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARI---------------- 257
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
+++ VFS L + D ISW++++ + NGR EAL L
Sbjct: 258 ---------------EDSERVFSHLYRRDS--------ISWNSLVAGYVQNGRYNEALRL 294
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
FR+M AKV +V S ++ CA A L++G+++HG+V+R +NI + + L++MY K
Sbjct: 295 FRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSK 354
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
CG ++ +F+++ D ++W ++I G+ ++G G A++ FEEM G KP+ VAFVAV
Sbjct: 355 CGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAV 414
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
L+ACSH GLV+E F+ M + + + ++EHYA + DLLGRAG L+EA D + M +EP
Sbjct: 415 LTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEP 474
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRI 639
VW TLL+SC +HKN ++AE +A +IF + +E G+Y+L+ N+YA++GRW++ AK+R+
Sbjct: 475 TGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRL 534
Query: 640 SAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDI 699
+ KGL+K SWIE+K K H F SG+ + + E L+ + QME +G V D
Sbjct: 535 RVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSG 594
Query: 700 ILWEM 704
+L ++
Sbjct: 595 VLHDV 599
Score = 149 bits (375), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 187/380 (49%), Gaps = 56/380 (14%)
Query: 33 CFDH-----LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
C DH +L+ C + L+ VH ++ G + + ++++Y++ + R
Sbjct: 102 CPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRK 161
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA-CK 143
VFE P + + +N+++ +G+YE+AL++ +M + D FT V+ +
Sbjct: 162 VFELMP---RKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSE 218
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
++ + G+ +H +V++ G +V+I + L+ MYAK ++ DS ++F + ++ I
Sbjct: 219 YVDVLK-----GKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSI 273
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
SWN + +G+ N + AL LF++M + P
Sbjct: 274 SWNSLVAGYVQNGRYNEALRLFRQMVSAKVRP---------------------------- 305
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
GA A + V+ CA LA H+GK +HG+V++GGF +F+ +AL+ +Y K G++
Sbjct: 306 -------GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNI 358
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
+ A+ +F + + VSW A+I +A G EAV +F ++++ +PN +++ AV
Sbjct: 359 QAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKR----QGVKPNQVAFVAV 414
Query: 384 IGAFASNGRGEEALDLFRKM 403
+ A + G +EA F M
Sbjct: 415 LTACSHVGLVDEAWGYFNSM 434
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 200/418 (47%), Gaps = 30/418 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K++H +I G ++ ++ + ++ +YA+ R+ D+ VF + S+ WNS++
Sbjct: 226 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHL---YRRDSISWNSLVAGY 282
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
V NG Y AL+L+ +M V F VI AC + + G+ +H +VL+ GF
Sbjct: 283 VQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHL----GKQLHGYVLRGGF 338
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
N+ I + L+ MY+K G + + K+FD++ + + +SW + G AL+ A+ LF+
Sbjct: 339 GRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEE 398
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLA 286
M+ +G++PN V + ++L++ + G ++E F+ M K G+ E A V ADL
Sbjct: 399 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAV----ADLL 454
Query: 287 ADHMGKV--IHGFVIKGGFEDYVFVKNALICVYGKHGDV----KVAQNLFSEIEEKNIVS 340
GK+ + F+ K E V + L+ H ++ KVA+ +F+ I+ +N+ +
Sbjct: 455 G-RAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT-IDSENMGA 512
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV---IGAFASNGRGEEAL 397
+ + YA G E ++ ++ K G ++P SW + F S R ++
Sbjct: 513 YVLMCNMYASNGRWKEMAKLRLRVRK--KGLRKKP-ACSWIEMKNKTHGFVSGDRSHPSM 569
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
D R + K V + G V S L+ E H + ++ + V G++N
Sbjct: 570 D--RINEFLKAVMEQMEKEGY--VADTSGVLHDVDEEHKRELLFGHSERLAVAFGIIN 623
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/691 (31%), Positives = 380/691 (54%), Gaps = 50/691 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K +H++++ G + ++ ++ +Y RF L AR VFE P + WNS++
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPL---RDVVSWNSLISGY 191
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+NG + AL++Y + R LGV+ D +T V+RAC +GS G I+H + ++G
Sbjct: 192 NANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEE----GDIIHGLIEKIGI 247
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ +V + N L+ MY K + D ++FDK+ +++ +SWN M G++ + +++LF
Sbjct: 248 KKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFME 307
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV---CAD 284
M + +P+ +T TS+L + G LE + D M G E A +++++ C +
Sbjct: 308 M-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGN 366
Query: 285 LAADH-------------MGKVIHGFVIKGGFED----YVFVKN----------ALICVY 317
L A +I+ ++ G F++ + +K L+ +
Sbjct: 367 LLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMS 426
Query: 318 GKHGDVKVAQNLFSEIEE----KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ GD+ + + L ++ + NIV N L+ YA+ G ++++VF ++ D
Sbjct: 427 TQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARD----- 481
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
+I+W+ +I + + L + +M+ V + T+ +L VC+ AA G+E
Sbjct: 482 ---IITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE 538
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
IHG + ++ + ++ V N L+ MY KCG L VF+ ++ KD++TW ++IS GM G
Sbjct: 539 IHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGE 598
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
G+ A+ F EM AG PD VAFVA++ ACSH+GLV EG F M ++++IEP++EHYA
Sbjct: 599 GKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYA 658
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
C+VDLL R+ LL +A D + +MP++P++ +WG LL++CRM +T++AE ++ +I L +
Sbjct: 659 CVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPD 718
Query: 614 TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSD 673
TG Y+L+SNIYAA G+W+ +R S K +GLKK G SW+E++ K+++F +G
Sbjct: 719 DTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQ 778
Query: 674 LKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ V ++L LA M +G + + +L ++
Sbjct: 779 FEEVNKLLGMLAGLMAKEGYIANLQFVLHDI 809
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/581 (25%), Positives = 272/581 (46%), Gaps = 86/581 (14%)
Query: 28 NSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
+L L T QL ++H+ +I G + S +A++++ YA F + +VF
Sbjct: 13 QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 72
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
A ++ LWNSI+R NGL+ AL LY + +++ + D +TFP VI AC +
Sbjct: 73 LAS--PSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGL-- 128
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
F + +H+ VL MGF +++I N LI MY + + + K+F+++ +++ +SWN
Sbjct: 129 --LDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNS 186
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
+ SG+ N + ALE++ R G+ P+ T +S+L + G +EE
Sbjct: 187 LISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEE------------ 234
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
G +IHG + K G + V V N L+ +Y K + +
Sbjct: 235 -----------------------GDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGR 271
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+F ++ ++ VSWN +I Y++ GL +E++++F ++ + +P+++
Sbjct: 272 RIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-----NQFKPDLL--------- 317
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
TI+ +L C L G+ +H +++ +
Sbjct: 318 --------------------------TITSILQACGHLGDLEFGKYVHDYMITSGYECDT 351
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
N L+NMY KCG L VF ++ KD ++WNSMI+ Y NG + A+ F +M++
Sbjct: 352 TASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKT 410
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIF-DMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
KPD V +V +LS + G ++ G+ + D+ F + + +VD+ + G +
Sbjct: 411 DVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSN--TLVDMYAKCGEMG 468
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
++ + +NM + W T++ SC ++ ++ M S++
Sbjct: 469 DSLKVFENMKAR-DIITWNTIIASCVHSEDCNLGLRMISRM 508
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/691 (31%), Positives = 380/691 (54%), Gaps = 50/691 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K +H++++ G + ++ ++ +Y RF L AR VFE P + WNS++
Sbjct: 194 KSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPL---RDVVSWNSLISGY 250
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+NG + AL++Y + R LGV+ D +T V+RAC +GS G I+H + ++G
Sbjct: 251 NANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEE----GDIIHGLIEKIGI 306
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ +V + N L+ MY K + D ++FDK+ +++ +SWN M G++ + +++LF
Sbjct: 307 KKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFME 366
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV---CAD 284
M + +P+ +T TS+L + G LE + D M G E A +++++ C +
Sbjct: 367 M-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGN 425
Query: 285 LAADH-------------MGKVIHGFVIKGGFED----YVFVKN----------ALICVY 317
L A +I+ ++ G F++ + +K L+ +
Sbjct: 426 LLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMS 485
Query: 318 GKHGDVKVAQNLFSEIEE----KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ GD+ + + L ++ + NIV N L+ YA+ G ++++VF ++ D
Sbjct: 486 TQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARD----- 540
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
+I+W+ +I + + L + +M+ V + T+ +L VC+ AA G+E
Sbjct: 541 ---IITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE 597
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
IHG + ++ + ++ V N L+ MY KCG L VF+ ++ KD++TW ++IS GM G
Sbjct: 598 IHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGE 657
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
G+ A+ F EM AG PD VAFVA++ ACSH+GLV EG F M ++++IEP++EHYA
Sbjct: 658 GKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYA 717
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
C+VDLL R+ LL +A D + +MP++P++ +WG LL++CRM +T++A+ ++ +I L +
Sbjct: 718 CVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPD 777
Query: 614 TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSD 673
TG Y+L+SN+YAA G+W+ +R S K +GLKK G SW+E++ K+++F +G
Sbjct: 778 DTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQ 837
Query: 674 LKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ V ++L LA M +G + + +L ++
Sbjct: 838 FEEVNKLLGMLAGLMAKEGYIANLQFVLHDI 868
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 146/581 (25%), Positives = 270/581 (46%), Gaps = 86/581 (14%)
Query: 28 NSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
+L L T QL ++H+ +I G + S +A++++ YA F + +VF
Sbjct: 72 QTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFR 131
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
A ++ WNSI+R NGL+ AL LY + +++ + D +TFP VI AC +
Sbjct: 132 LA--SPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGL-- 187
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
F + +H+ VL MGF +++I N LI MY + + + K+F+++ +++ +SWN
Sbjct: 188 --LDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNS 245
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
+ SG+ N + ALE++ R G+ P+ T +S+L + G +EE
Sbjct: 246 LISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEE------------ 293
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
G +IHG + K G + V V N L+ +Y K + +
Sbjct: 294 -----------------------GDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGR 330
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+F ++ ++ VSWN +I Y++ GL +E++++F ++ + +P+++
Sbjct: 331 RIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-----NQFKPDLL--------- 376
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
TI+ +L C L G+ +H +++ +
Sbjct: 377 --------------------------TITSILQACGHLGDLEFGKYVHDYMITSGYECDT 410
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
N L+NMY KCG L VF ++ KD ++WNSMI+ Y NG + A+ F +M++
Sbjct: 411 TASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKT 469
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIF-DMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
KPD V +V +LS + G + G+ + D+ F + + +VD+ + G +
Sbjct: 470 DVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSN--TLVDMYAKCGEMG 527
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
++ + +NM + W T++ SC ++ ++ M S++
Sbjct: 528 DSLKVFENMKAR-DIITWNTIIASCVHSEDCNLGLRMISRM 567
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/588 (35%), Positives = 317/588 (53%), Gaps = 17/588 (2%)
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
G + + + L+ Y + G +D+ + D + + + W+ + + A + D +GA L
Sbjct: 50 GVSRDAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLL 109
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
+RM +G+EPN +TW L+S R GR + + M G A ++ LS D+
Sbjct: 110 ERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDV 169
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+G+ +HG+V+K G V ALI +YGK G +F E ++ S NAL+
Sbjct: 170 GDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMDVASCNALV 229
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+ EA+ +F + G +E NV+SW++++ NGR EA+DLFR+MQ
Sbjct: 230 AGLSRNAQVSEALRLFREFV---GRGIEL-NVVSWTSIVACCVQNGRDLEAVDLFREMQS 285
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
+ NSVTI +L A AAL GR H +R + +I V + L++MY KCG + +
Sbjct: 286 EGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRD 345
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
++FE + +++++WN+MI GY M+G ENA+ F M + KPD V F VL ACS
Sbjct: 346 ARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQ 405
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
AG EGR F+ M + I P+MEHYACMV LLGRAG L +A DI+ MP EP+ +WG
Sbjct: 406 AGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWG 465
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
+LL SCR+H N +AE A +F L E G+Y+LLSNIYA+ W+ ++R KT G
Sbjct: 466 SLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVG 525
Query: 646 LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMM 705
LKK G SWIE+K K+HM +G+S + + E L+ L ++M G P D +L +
Sbjct: 526 LKKEKGCSWIEIKNKVHMLLAGDSSHPMMAAITEKLKHLTMEMRRLGFAPSTDYVLHD-- 583
Query: 706 GKKNVKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRSTNGQLMKN 753
++ D+I S H L + L L+ + T Q++KN
Sbjct: 584 -------VEEQEKDDILSVHS----EKLAVALGLISTSHGTPLQVIKN 620
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 195/398 (48%), Gaps = 38/398 (9%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
L+ C + + +H V G + AF+A+ +L Y RFG DAR+V + P +
Sbjct: 30 LKSCSALRLARALHAAAAVAGVSRDAFVASSLLHAYLRFGATADARSVLDGMP---HRTV 86
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR-------- 149
+ W++++ + S+G E A L +MR GV + T+ ++ G R
Sbjct: 87 VGWSALIAAHASHGDAEGAWGLLERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVR 146
Query: 150 -----------------------FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ 186
+ G+ +H +V++ G + + + LI MY K G+
Sbjct: 147 MHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGR 206
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
+ ++FD+ + S N + +G + N AL LF+ G+E N V+WTS+++
Sbjct: 207 ADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVAC 266
Query: 247 HARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY 306
+ GR E +DLF M+ GIE + I VL A++AA G+ H F ++ GF
Sbjct: 267 CVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHD 326
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
++V +AL+ +Y K G V+ A+ +F + +N+VSWNA+I YA G + AV +F ++
Sbjct: 327 IYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAVRLFRSMQS 386
Query: 367 LDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
S E+P++++++ V+GA + G EE F +MQ
Sbjct: 387 ----SKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQ 420
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/625 (33%), Positives = 352/625 (56%), Gaps = 48/625 (7%)
Query: 71 SIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG 130
S+ A + +L+ + E + + WN ++ +G AL L V+M + GV
Sbjct: 209 SMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRL 268
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
D T+ + AC + F +G+ +H V++ Q + ++ + LI +YAK G ++
Sbjct: 269 DSTTYTSSLTACARL----FSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 324
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
++F+ ++ +N +SW ++ G +L ++C
Sbjct: 325 KRVFNSLQDRNSVSWTVLIGG-SLQYEC-------------------------------- 351
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
++++LF+ MR + + A+A ++S C + +G+ +H +K G + V
Sbjct: 352 --FSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVS 409
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
N+LI +Y K GD++ A+ +FS + E++IVSW ++IT+Y++ G +A E F DG
Sbjct: 410 NSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFF------DG- 462
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK-VVANSVTISGLLSVCAESAALN 429
M N I+W+A++GA+ +G E+ L ++ M K V + VT L CA+ A
Sbjct: 463 -MATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANK 521
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
+G +I GH V+ + N+ V N + MY KCG + E +F+ + KD+++WN+MI+GY
Sbjct: 522 LGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYS 581
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
+G+G+ A TF++M+ G KPD +++VAVLS CSH+GLV EG+ FDMM R I P +
Sbjct: 582 QHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGL 641
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
EH++CMVDLLGRAG L EA D++ MPM+P A VWG LL++C++H N ++AE A +F
Sbjct: 642 EHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFE 701
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
L + +GSYMLL+ IY+ +G+ +D+A+VR + KG+KK G SW+EV+ K+H+F + +
Sbjct: 702 LDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDV 761
Query: 670 LQSDLKNVCEVLEELALQMENKGCV 694
+ + ++EL ++ + G V
Sbjct: 762 SHPQVIAIRNKMDELMEKIAHLGYV 786
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 223/503 (44%), Gaps = 25/503 (4%)
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD-K 196
+R+C G+ + + +H ++ +G V + N L+ Y G +SD+ +L
Sbjct: 10 ALRSCGSRGAL----AGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
++ N I+ N+M +G+A A ELF RM + +W +L+S + + R +
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP----RRDVASWNTLMSGYFQARRFLDG 121
Query: 257 MDLFDMMRKRGIEV-GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
++ F M + G + A V+ C L + + G K F V+ AL+
Sbjct: 122 LETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVD 181
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
++ + G V A LFS+IE I N+++ YA+ D A+E F + + D
Sbjct: 182 MFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERD------- 234
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH 435
V+SW+ +I A + +GR EAL L +M V +S T + L+ CA +L G+++H
Sbjct: 235 -VVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLH 293
Query: 436 GHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
V+R + V + L+ +Y KCG +E VF ++ ++ ++W +I G
Sbjct: 294 AKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFS 353
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
++ F +M D A ++S C + + GR++ + ++ + + +
Sbjct: 354 KSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS-L 412
Query: 556 VDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF-GLITET 614
+ L + G LQ A + +M E + W +++ + N A + F G+ T
Sbjct: 413 ISLYAKCGDLQNAEFVFSSMS-ERDIVSWTSMITAYSQIGNI----IKAREFFDGMATRN 467
Query: 615 TGSYMLLSNIYAASGRWEDAAKV 637
++ + Y G ED K+
Sbjct: 468 AITWNAMLGAYIQHGAEEDGLKM 490
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 186/380 (48%), Gaps = 21/380 (5%)
Query: 25 TYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
TY +SL C + ++ KQ+H ++I + ++A+ ++ +YA+ G +A+
Sbjct: 272 TYTSSLTAC-----ARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKR 326
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
VF + +S+ W ++ ++ + +++L+ +MR + D F +I C
Sbjct: 327 VFNSLQ---DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC-- 381
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
R G+ +H+ L+ G + + N LI +YAK G + ++ +F + ++ +S
Sbjct: 382 --FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVS 439
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MM 263
W M + ++ + A E F M N +TW ++L ++ + G E+ + ++ M+
Sbjct: 440 WTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSAML 495
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
++ + + CAD+ A+ +G I G +K G V V NA I +Y K G +
Sbjct: 496 SQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRI 555
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
AQ LF + K++VSWNA+IT Y++ G+ +A + F + L G+ +P+ IS+ AV
Sbjct: 556 SEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDM--LSKGA--KPDYISYVAV 611
Query: 384 IGAFASNGRGEEALDLFRKM 403
+ + +G +E F M
Sbjct: 612 LSGCSHSGLVQEGKLYFDMM 631
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 178/370 (48%), Gaps = 45/370 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP----------------- 90
+Q+H+ + +G N + ++ ++S+YA+ G L +A VF +
Sbjct: 391 RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQI 450
Query: 91 ---------FDCKSS--SLLWNSILRVNVSNGLYENALKLYVKM-RKLGVLGDGFTFPLV 138
FD ++ ++ WN++L + +G E+ LK+Y M + V D T+ +
Sbjct: 451 GNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 510
Query: 139 IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR 198
R C +G+ + G + H ++ G NV + N I MY+K G++S++ KLFD +
Sbjct: 511 FRGCADIGANKL----GDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLN 566
Query: 199 VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD 258
K+ +SWN M +G++ + A + F M +G +P+++++ ++LS + G ++E
Sbjct: 567 GKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKL 626
Query: 259 LFDMM-RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
FDMM R GI G E + ++ + A H+ + + K + V AL+
Sbjct: 627 YFDMMTRVHGISPGLEHFSCMVDLLG--RAGHLTEA-KDLIDKMPMKPTAEVWGALLSAC 683
Query: 318 GKHGDVKVAQ----NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
HG+ ++A+ ++F E++ + S+ L Y++AG D++ +V + D G +
Sbjct: 684 KIHGNDELAELAAKHVF-ELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMR--DKGIKK 740
Query: 374 RPNVISWSAV 383
P SW V
Sbjct: 741 NPGY-SWMEV 749
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 169/390 (43%), Gaps = 56/390 (14%)
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF-S 331
+A+A L C A + +HG ++ G VF++N L+ Y G + A+ L +
Sbjct: 5 QALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRA 64
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+I+E N+++ N ++ YA+ G +A E+F + M R +V SW+ ++ +
Sbjct: 65 DIKEPNVITHNIMMNGYAKQGSLSDAEELFDR--------MPRRDVASWNTLMSGYFQAR 116
Query: 392 RGEEALDLFRKMQLA-KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
R + L+ F M + + N+ T ++ C + ++ G + + V+
Sbjct: 117 RFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE 176
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEK-------------------------------KDLI 479
L++M+++CG ++ +F QIE+ +D++
Sbjct: 177 TALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVV 236
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN MI+ +G AL EM G + D + + L+AC+ + G+++ +
Sbjct: 237 SWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKV 296
Query: 540 VREFRIEPQMEHY--ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK-- 595
+R PQ++ Y + +++L + G +EA + ++ + N+ W L+ ++
Sbjct: 297 IRSL---PQIDPYVASALIELYAKCGSFKEAKRVFNSL-QDRNSVSWTVLIGGSLQYECF 352
Query: 596 -------NTDVAEAMASQIFGLITETTGSY 618
N AE MA F L T +G +
Sbjct: 353 SKSVELFNQMRAELMAIDQFALATLISGCF 382
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 37/214 (17%)
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL----- 463
+A + ++ L C AL R +HG +V V + + +QN LL+ Y+ CG L
Sbjct: 1 MAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARR 60
Query: 464 ----------------------EEGHL-----VFEQIEKKDLITWNSMISGYGMNGLGEN 496
++G L +F+++ ++D+ +WN+++SGY +
Sbjct: 61 LLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLD 120
Query: 497 ALATFEEMIEAGFK-PDGVAFVAVLSACSHAGLVNEGRRIFDMMVR-EFRIEPQMEHYAC 554
L TF M +G P+ F V+ +C G ++ + + +F +P +E
Sbjct: 121 GLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TA 178
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+VD+ R G + AS + + P + ++L
Sbjct: 179 LVDMFVRCGYVDFASRLFSQIE-RPTIFCRNSML 211
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/625 (33%), Positives = 352/625 (56%), Gaps = 48/625 (7%)
Query: 71 SIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG 130
S+ A + +L+ + E + + WN ++ +G AL L V+M + GV
Sbjct: 199 SMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRL 258
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
D T+ + AC + F +G+ +H V++ Q + ++ + LI +YAK G ++
Sbjct: 259 DSTTYTSSLTACARL----FSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 314
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
++F+ ++ +N +SW ++ G +L ++C
Sbjct: 315 KRVFNSLQDRNSVSWTVLIGG-SLQYEC-------------------------------- 341
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
++++LF+ MR + + A+A ++S C + +G+ +H +K G + V
Sbjct: 342 --FSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVS 399
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
N+LI +Y K GD++ A+ +FS + E++IVSW ++IT+Y++ G +A E F DG
Sbjct: 400 NSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFF------DG- 452
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK-VVANSVTISGLLSVCAESAALN 429
M N I+W+A++GA+ +G E+ L ++ M K V + VT L CA+ A
Sbjct: 453 -MATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANK 511
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
+G +I GH V+ + N+ V N + MY KCG + E +F+ + KD+++WN+MI+GY
Sbjct: 512 LGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYS 571
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
+G+G+ A TF++M+ G KPD +++VAVLS CSH+GLV EG+ FDMM R I P +
Sbjct: 572 QHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGL 631
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
EH++CMVDLLGRAG L EA D++ MPM+P A VWG LL++C++H N ++AE A +F
Sbjct: 632 EHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFE 691
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
L + +GSYMLL+ IY+ +G+ +D+A+VR + KG+KK G SW+EV+ K+H+F + +
Sbjct: 692 LDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDV 751
Query: 670 LQSDLKNVCEVLEELALQMENKGCV 694
+ + ++EL ++ + G V
Sbjct: 752 SHPQVIAIRNKMDELMEKIAHLGYV 776
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 233/512 (45%), Gaps = 55/512 (10%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+ +H +L+ G ++ FL +L Y G L DAR + D K +++ ++I+
Sbjct: 40 RALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRA---DIKEPNVITHNIMMNG 96
Query: 108 VS-NGLYENALKLYVKMRKLGVLGDGFTFPLVIR-ACKFM--GSFRFRFSFGQIVHNHVL 163
+ G +A +L+ +M + V R A +M G+ R Q++
Sbjct: 97 YAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCRELAPQLL-GLFW 155
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
+ F G+ + L+ M+ + G + + +LF ++ N M +G+A + D A+E
Sbjct: 156 KFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIE 215
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
F+ M E + V+W ++++ ++ GR+ E + L M ++G+ + + L+ CA
Sbjct: 216 YFEDMA----ERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACA 271
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
L + GK +H VI+ + +V +ALI +Y K G K A+ +F+ ++++N VSW
Sbjct: 272 RLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTV 331
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
LI GGS++ ++++LF +M
Sbjct: 332 LI-----------------------GGSLQYECF----------------SKSVELFNQM 352
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
+ + + ++ L+S C L +GR++H ++ N+ I+V N L+++Y KCG L
Sbjct: 353 RAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDL 412
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
+ VF + ++D+++W SMI+ Y G A F+ M + + + A+L A
Sbjct: 413 QNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAY 468
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
G +G +++ M+ + + P Y +
Sbjct: 469 IQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 500
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 186/380 (48%), Gaps = 21/380 (5%)
Query: 25 TYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
TY +SL C + ++ KQ+H ++I + ++A+ ++ +YA+ G +A+
Sbjct: 262 TYTSSLTAC-----ARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKR 316
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
VF + +S+ W ++ ++ + +++L+ +MR + D F +I C
Sbjct: 317 VFNSLQ---DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGC-- 371
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
R G+ +H+ L+ G + + N LI +YAK G + ++ +F + ++ +S
Sbjct: 372 --FNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVS 429
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MM 263
W M + ++ + A E F M N +TW ++L ++ + G E+ + ++ M+
Sbjct: 430 WTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKMYSAML 485
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
++ + + CAD+ A+ +G I G +K G V V NA I +Y K G +
Sbjct: 486 SQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRI 545
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
AQ LF + K++VSWNA+IT Y++ G+ +A + F + L G+ +P+ IS+ AV
Sbjct: 546 SEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDM--LSKGA--KPDYISYVAV 601
Query: 384 IGAFASNGRGEEALDLFRKM 403
+ + +G +E F M
Sbjct: 602 LSGCSHSGLVQEGKLYFDMM 621
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/502 (23%), Positives = 216/502 (43%), Gaps = 49/502 (9%)
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD-K 196
+R+C G+ + + +H ++ +G V + N L+ Y G +SD+ +L
Sbjct: 26 ALRSCGSRGAL----AGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 81
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
++ N I+ N+M +G+A A ELF RM + +W +L+S
Sbjct: 82 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP----RRDVASWNTLMS----------- 126
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
D R G + A+ C +LA + G K F V+ AL+ +
Sbjct: 127 ----DTSRPAGSWMSCGALG-----CRELAPQLL-----GLFWKFDFWGDPDVETALVDM 172
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
+ + G V A LFS+IE I N+++ YA+ D A+E F + + D
Sbjct: 173 FVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERD-------- 224
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
V+SW+ +I A + +GR EAL L +M V +S T + L+ CA +L G+++H
Sbjct: 225 VVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHA 284
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
V+R + V + L+ +Y KCG +E VF ++ ++ ++W +I G
Sbjct: 285 KVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSK 344
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
++ F +M D A ++S C + + GR++ + ++ + + ++
Sbjct: 345 SVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS-LI 403
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF-GLITETT 615
L + G LQ A + +M E + W +++ + N A + F G+ T
Sbjct: 404 SLYAKCGDLQNAEFVFSSMS-ERDIVSWTSMITAYSQIGNI----IKAREFFDGMATRNA 458
Query: 616 GSYMLLSNIYAASGRWEDAAKV 637
++ + Y G ED K+
Sbjct: 459 ITWNAMLGAYIQHGAEEDGLKM 480
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 177/370 (47%), Gaps = 45/370 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP----------------- 90
+Q+H+ + +G N + ++ ++S+YA+ G L +A VF +
Sbjct: 381 RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQI 440
Query: 91 ---------FD--CKSSSLLWNSILRVNVSNGLYENALKLYVKM-RKLGVLGDGFTFPLV 138
FD +++ WN++L + +G E+ LK+Y M + V D T+ +
Sbjct: 441 GNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTL 500
Query: 139 IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR 198
R C +G+ + G + H ++ G NV + N I MY+K G++S++ KLFD +
Sbjct: 501 FRGCADIGANKL----GDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLN 556
Query: 199 VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD 258
K+ +SWN M +G++ + A + F M +G +P+++++ ++LS + G ++E
Sbjct: 557 GKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKL 616
Query: 259 LFDMM-RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
FDMM R GI G E + ++ + A H+ + + K + V AL+
Sbjct: 617 YFDMMTRVHGISPGLEHFSCMVDLLG--RAGHLTEA-KDLIDKMPMKPTAEVWGALLSAC 673
Query: 318 GKHGDVKVAQ----NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
HG+ ++A+ ++F E++ + S+ L Y++AG D++ +V + D G +
Sbjct: 674 KIHGNDELAELAAKHVF-ELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMR--DKGIKK 730
Query: 374 RPNVISWSAV 383
P SW V
Sbjct: 731 NPGY-SWMEV 739
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 159/365 (43%), Gaps = 32/365 (8%)
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF-S 331
+A+A L C A + +HG ++ G VF++N L+ Y G + A+ L +
Sbjct: 21 QALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRA 80
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS-------MERPNVISWSAVI 384
+I+E N+++ N ++ YA+ G +A E+F ++ + D S RP SW +
Sbjct: 81 DIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRP-AGSWMSC- 138
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
GA + L LF K + + L+ + ++ + + R
Sbjct: 139 GALGCRELAPQLLGLFWKFDF---WGDPDVETALVDMFVRCGYVDFASRLFSQIER---- 191
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
I +N +L Y K ++ FE + ++D+++WN MI+ +G AL EM
Sbjct: 192 PTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEM 251
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY--ACMVDLLGRA 562
G + D + + L+AC+ + G+++ ++R PQ++ Y + +++L +
Sbjct: 252 HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSL---PQIDPYVASALIELYAKC 308
Query: 563 GLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK---------NTDVAEAMASQIFGLITE 613
G +EA + ++ + N+ W L+ ++ N AE MA F L T
Sbjct: 309 GSFKEAKRVFNSL-QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATL 367
Query: 614 TTGSY 618
+G +
Sbjct: 368 ISGCF 372
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 20/177 (11%)
Query: 407 KVVANSVT--ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
+++ ++VT ++ L C AL R +HG +V V + + +QN LL+ Y+ CG L
Sbjct: 13 RLLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALS 72
Query: 465 EG-HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS-- 521
+ L+ I++ ++IT N M++GY G +L+ EE+ + + D ++ ++S
Sbjct: 73 DARRLLRADIKEPNVITHNIMMNGYAKQG----SLSDAEELFDRMPRRDVASWNTLMSDT 128
Query: 522 --------ACSHAGLVNEGRRIFDMMVR-EFRIEPQMEHYACMVDLLGRAGLLQEAS 569
+C G ++ + + +F +P +E +VD+ R G + AS
Sbjct: 129 SRPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVDMFVRCGYVDFAS 183
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 230/682 (33%), Positives = 367/682 (53%), Gaps = 55/682 (8%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C I + VH + +G + F+ ++S+Y R G +AR VF+
Sbjct: 129 FPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMR 188
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK-LGVLGDGFTFPLVIRACKFMGSFR 149
+ WNSI+ + G A+K++ +M + LG+ D + V+ AC +G++
Sbjct: 189 ERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAW- 247
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
S G+ VH + L+ G +V + N ++ MYAK G M ++ K+F++++VK+ +SWN M
Sbjct: 248 ---SRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMV 304
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+G++ D AL LF+++ E +E N VTW+++++ +A+ G E +D+F MR G E
Sbjct: 305 TGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSE 364
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE-------DYVFVKNALICVYGKHGD 322
+ +LS CA GK H IK D + V NALI +Y K
Sbjct: 365 PNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKS 424
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
K A+ +F I K+ +V++W+
Sbjct: 425 PKAARAMFDLIPPKD-------------------------------------RSVVTWTV 447
Query: 383 VIGAFASNGRGEEALDLFRKMQLAK--VVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+IG A +G EAL+LF +M V+ N+ TIS L CA AL GR+IH +V+R
Sbjct: 448 LIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLR 507
Query: 441 VSMNKNIL-VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
+L V N L++MY K G ++ +VF+ + +++ ++W S+++GYGM+G GE AL
Sbjct: 508 NRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQ 567
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
F EM + G PDGV FV VL ACSH+G+V++G F+ M ++F + P EHYACMVDLL
Sbjct: 568 IFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLL 627
Query: 560 GRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYM 619
RAG L EA ++++ MPM+P VW LL++CR++ N ++ E A+Q+ L + GSY
Sbjct: 628 SRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYT 687
Query: 620 LLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCE 679
LLSNIYA + W+D A++R K G+KK G SW++ ++ F +G+ + + +
Sbjct: 688 LLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYD 747
Query: 680 VLEELALQMENKGCVPDNDIIL 701
+L +L +++ G VPDN L
Sbjct: 748 LLRDLMQRIKALGYVPDNRFAL 769
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 188/612 (30%), Positives = 303/612 (49%), Gaps = 72/612 (11%)
Query: 17 PSRPFSIITY-----NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLS 71
P P +T +S D L QCK++ + +H QL+V G ++S
Sbjct: 10 PKPPLLFLTTFFFSTASSTTDLTSTLFHQCKSLASAELIHQQLLVQGLPHDP---THIIS 66
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+Y F A +V + WN ++R +V G E+ L+LY +M++LG D
Sbjct: 67 MYLTFNSPAKALSVLRRL-HPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPD 125
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
+TFP V++AC + SFR G VH V GF+ NV + N L+ MY + G ++
Sbjct: 126 HYTFPFVLKACGEIPSFR----CGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 181
Query: 192 KLFDKVR---VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
++FD++R V + +SWN + + + D A+++F+RM
Sbjct: 182 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERM-------------------- 221
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
T DL GI A ++ VL CA + A GK +HG+ ++ G + VF
Sbjct: 222 -------TEDL-------GIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 267
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V NA++ +Y K G ++ A +F ++ K++VSWNA++T Y++ G D+A+ +F EK+
Sbjct: 268 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLF---EKIR 324
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
+E NV++WSAVI +A G G EALD+FR+M+L N VT+ LLS CA + L
Sbjct: 325 EEKIEL-NVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTL 383
Query: 429 NIGREIHGHVVRVSMN-------KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD--LI 479
G+E H H ++ +N +++V N L++MY KC + +F+ I KD ++
Sbjct: 384 LHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVV 443
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAG--FKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
TW +I G +G AL F +M++ P+ L AC+ G + GR+I
Sbjct: 444 TWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHA 503
Query: 538 MMVREFRIEPQMEHYA-CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
++R R E M A C++D+ ++G + A + NM + N W +L+ MH
Sbjct: 504 YVLRN-RFESAMLFVANCLIDMYSKSGDVDAARVVFDNM-HQRNGVSWTSLMTGYGMHGR 561
Query: 597 TDVAEAMASQIF 608
+ EA+ QIF
Sbjct: 562 GE--EAL--QIF 569
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/646 (33%), Positives = 345/646 (53%), Gaps = 97/646 (15%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS YA+ G + +A+ +F+ P CK+S + WN +L V NG E+A +L+
Sbjct: 67 MLSGYAQNGYVKEAKEIFDEMP--CKNS-ISWNGMLAAYVQNGRIEDARRLFESKAD--- 120
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ L+ C ++G Y K ++
Sbjct: 121 ------WELISWNC----------------------------------MMGGYVKRNRLV 140
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
D+ +FD++ ++ +SWN M SG+A N + A LF+ + + TWT+++S +
Sbjct: 141 DARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVR----DVFTWTAMVSGYV 196
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ G L+E +FD M ++ SV
Sbjct: 197 QNGMLDEARRVFDGMPEKN------------SVSW------------------------- 219
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
NA+I Y + + A+ LF + +N+ SWN +IT YA+ G +A F ++ + D
Sbjct: 220 --NAIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRD 277
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
ISW+A+I +A +G GEEAL LF +M+ N T + LS CAE AAL
Sbjct: 278 S--------ISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAAL 329
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+G+++HG VV+ + V N LL MY KCG +++ ++VFE IE+K++++WN+MI+GY
Sbjct: 330 ELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGY 389
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
+G G+ AL FE M + G PD V V VLSACSH GLV++G F M +++ I
Sbjct: 390 ARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITAN 449
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
+HY CM+DLLGRAG L +A +++KNMP EP+A WG LL + R+H NT++ E A IF
Sbjct: 450 SKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIF 509
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
+ + +G Y+LLSN+YAASGRW D ++R+ + +G+KKV G SW+EV+ KIH F+ G+
Sbjct: 510 EMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGD 569
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQ 714
S+ + + LEEL L+M+ +G V ++L ++ ++ V ++
Sbjct: 570 SVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLK 615
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 186/410 (45%), Gaps = 84/410 (20%)
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
CV ++ +++ A+ LF ++ E+++VSWNA+++ YA+ G EA E+F + M
Sbjct: 40 CV--RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDE--------MPC 89
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
N ISW+ ++ A+ NGR E+A LF ES A
Sbjct: 90 KNSISWNGMLAAYVQNGRIEDARRLF-----------------------ESKA------- 119
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
+ ++ N ++ Y+K L + +F+++ ++D ++WN+MISGY NG
Sbjct: 120 ---------DWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGEL 170
Query: 495 ENALATFEEMIEAGFKP--DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
A FEE P D + A++S G+++E RR+FD M + + +
Sbjct: 171 LEAQRLFEE------SPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVS-----W 219
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
++ + + +A ++ + MP + N W T++ +N D+A+ A F +
Sbjct: 220 NAIIAGYVQCKRMDQARELFEAMPCQ-NVSSWNTMITG--YAQNGDIAQ--ARNFFDRMP 274
Query: 613 ETTG-SYMLLSNIYAASGRWEDAAKVRISAKTKG-----------LKKVAGQSWIEVKRK 660
+ S+ + YA SG E+A + + K G L A + +E+ ++
Sbjct: 275 QRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQ 334
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNV 710
+H G +++ L++ C V L + G + D+ I++E + +K V
Sbjct: 335 VH----GRVVKAGLESGCYVGNALLVMYCKCGNI-DDAYIVFEGIEEKEV 379
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 124/243 (51%), Gaps = 12/243 (4%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
QCK + Q +++ + N S++ +++ YA+ G + ARN F+ P + S+
Sbjct: 228 QCKRMDQARELFEAMPCQ--NVSSWNT--MITGYAQNGDIAQARNFFDRMP---QRDSIS 280
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
W +I+ +G E AL L+V+M++ G + TF + C + + G+ VH
Sbjct: 281 WAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAAL----ELGKQVH 336
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
V++ G + ++ N L+ MY K G + D++ +F+ + K +SWN M +G+A +
Sbjct: 337 GRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGK 396
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVV 278
AL LF+ M+ G+ P+ VT +LS+ + G +++ + F M + GI ++ +
Sbjct: 397 EALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCM 456
Query: 279 LSV 281
+ +
Sbjct: 457 IDL 459
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 46/277 (16%)
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD-- 368
NA++ Y ++G VK A+ +F E+ KN +SWN ++ +Y + G ++A +F +
Sbjct: 65 NAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELI 124
Query: 369 ------GGSMERPNV---------------ISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
GG ++R + +SW+ +I +A NG EA LF + +
Sbjct: 125 SWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRD 184
Query: 408 VVANSVTISG------------LLSVCAESAALNIGREIHGHVVRVSMN----------- 444
V + +SG + E +++ I G+V M+
Sbjct: 185 VFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPC 244
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
+N+ N ++ Y + G + + F+++ ++D I+W ++I+GY +G GE AL F EM
Sbjct: 245 QNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEM 304
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
G + + F + LS C+ + G+++ +V+
Sbjct: 305 KRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVK 341
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/658 (32%), Positives = 354/658 (53%), Gaps = 59/658 (8%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA--RFGRLFDARNVFETAPFDCKS 95
L+ CK++ QLKQ+ +Q+ G ++++ A G L A +F
Sbjct: 150 LRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQ---DP 206
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
S ++N ++++ G+ L L+ ++R+ G+ DGFT+P V++A + R G
Sbjct: 207 SLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQ----G 262
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ V +++ G + ++ N LI MY ++ + ++ KLFD++ ++ +SWN+M
Sbjct: 263 EKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVM------- 315
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
+S + RC R E+ ++ F M++ G E EA
Sbjct: 316 ----------------------------ISGYVRCRRFEDAINTFREMQQEGNEKPDEAT 347
Query: 276 AV-VLSVCADLAADHMGKVIHGFVIKG-GFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
V LS C L +G IH +V K GF + NAL+ +Y K G + +A+N+F E+
Sbjct: 348 VVSTLSACTALKNLELGDEIHNYVRKELGFT--TRIDNALLDMYAKCGCLNIARNIFDEM 405
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
KN++ W ++I+ Y G EA ++F + D V+ W+A+I +
Sbjct: 406 SMKNVICWTSMISGYINCGDLREARDLFDKSPVRD--------VVLWTAMINGYVQFHHF 457
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
++A+ LFR+MQ+ +V + T+ LL+ CA+ AL G+ IHG++ + +++V L
Sbjct: 458 DDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTAL 517
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
+ MY KCGC+++ +F ++E KD +W S+I G MNG AL F EM G KPD
Sbjct: 518 IEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDD 577
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
+ F+ VLSACSH GLV EGRR F+ M + RIEP++EHY C++DLLGRAGLL EA ++++
Sbjct: 578 ITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQ 637
Query: 574 NMPMEPNAYV---WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
+P+E V +G LL++CR+H N D+ E +A ++ + + + + LL+NIYA+ R
Sbjct: 638 EIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDR 697
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
WEDA KVR K G+KK+ G S IEV +H F G+ ++ +C +L + Q+
Sbjct: 698 WEDAKKVRRKMKELGVKKMPGCSLIEVDGIVHEFLVGDPSHPEMMEICSMLNRVTGQL 755
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 173/368 (47%), Gaps = 25/368 (6%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
+N+LLD + +C ++ + + +++ + + ++S Y G L +AR++F
Sbjct: 382 DNALLDMY----AKCGCLNIARNIFDEM----SMKNVICWTSMISGYINCGDLREARDLF 433
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+ +P +LW +++ V +++A+ L+ +M+ V D FT ++ C +G
Sbjct: 434 DKSPV---RDVVLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLG 490
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
+ G+ +H ++ + +V + LI MY+K G + S ++F ++ K+ SW
Sbjct: 491 AL----EQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWT 546
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK- 265
+ G A+N AL LF ME G +P+ +T+ +LS+ + G +EE F+ M+K
Sbjct: 547 SIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKV 606
Query: 266 RGIEVGAEAIAVVLSVCADLA-ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
IE E V+ + D ++I I+ E V + AL+ H +V
Sbjct: 607 HRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIE-NCEIVVPLYGALLSACRIHNNVD 665
Query: 325 VAQNLFSEIEEKNIVSWNALITS-----YAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
+ + L ++E NI S ++ I + YA ++A +V ++++L M ++I
Sbjct: 666 MGERLAKKLE--NIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIE 723
Query: 380 WSAVIGAF 387
++ F
Sbjct: 724 VDGIVHEF 731
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 214/661 (32%), Positives = 356/661 (53%), Gaps = 56/661 (8%)
Query: 50 VHNQLIVTGANASAFLAARVLS---IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
H Q++ TG + + + +++L + F L A +VFET + + L+WN++LR
Sbjct: 1 THAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQ---EPNLLIWNTMLRG 57
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
S+ + L++YV+M G + + +TFP ++++C +F G+ +H V+++G
Sbjct: 58 LASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEE----GRQIHAQVMKLG 113
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+ + + LI MYA+ G++ D+ K+FD ++ +S + +G+A D A ++F
Sbjct: 114 CELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFD 173
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
+ E + V+W ++++ + EE ++LF M + + + VLS CA
Sbjct: 174 XI----TERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSG 229
Query: 287 ADHMGKVIHGFVIKG-GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+ +G+ IH V GF + + NA I +Y K GDV++A LF + K+
Sbjct: 230 SIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKD-------- 281
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
V+SW+ +IG + +EAL LF++M
Sbjct: 282 -------------------------------VVSWNTLIGGYTHMNLYKEALLLFQEMLR 310
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVR--VSMNKNILVQNGLLNMYMKCGCL 463
+ N VT+ +L CA A++IGR IH ++ + + ++ L++MY KCG +
Sbjct: 311 SGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDI 370
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
E H VF + K L +WN+MI G+ M+G A F M + G +PD + V +LSAC
Sbjct: 371 EAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSAC 430
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
SH+GL++ GR IF + +++ I P++EHY CM+DLLG AGL +EA +I+ MPMEP+ +
Sbjct: 431 SHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVI 490
Query: 584 WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKT 643
W +LL +C+MH N ++AE+ A ++ + E +GSY+LLSNIYA +GRWED A++R
Sbjct: 491 WCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNG 550
Query: 644 KGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWE 703
KG+KKV G S IE+ +H F G+ L + + +LEE+ + +E G VPD +L E
Sbjct: 551 KGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQE 610
Query: 704 M 704
M
Sbjct: 611 M 611
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 148/607 (24%), Positives = 254/607 (41%), Gaps = 140/607 (23%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE-TA 89
F LL+ C KT + +Q+H Q++ G + ++S+YAR GRL DAR VF+ ++
Sbjct: 86 FPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSS 145
Query: 90 PFDCKSSSLL---------------------------WNSILRVNVSNGLYENALKLYVK 122
D S + L WN+++ V N YE AL+L+ +
Sbjct: 146 QRDVVSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKE 205
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M + V D T V+ AC GS +V +H GF ++ IVN IG+Y+
Sbjct: 206 MMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDH---HGFGSSLKIVNAFIGLYS 262
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K G + + LF+ + K+ +SWN + G+ AL LF+ M G PN VT S
Sbjct: 263 KCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLS 322
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK-- 300
VL CA L A +G+ IH ++ K
Sbjct: 323 -----------------------------------VLPACAHLGAIDIGRWIHVYIDKRL 347
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G + ++ +LI +Y K GD++ A +F+ + K++ SWNA+I +A G + A ++
Sbjct: 348 KGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDL 407
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
FS++ K NG + + +T+ GLLS
Sbjct: 408 FSRMRK-----------------------NG----------------IEPDDITLVGLLS 428
Query: 421 VCAESAALNIGREIHGHVVR-VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE-KKDL 478
C+ S L++GR I V + ++ + ++++ G +E + + + D
Sbjct: 429 ACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDG 488
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI--- 535
+ W S++ M+G E A + ++++E + G ++V + + + AG + RI
Sbjct: 489 VIWCSLLKACKMHGNLELAESFAQKLMEIEPENSG-SYVLLSNIYATAGRWEDVARIREV 547
Query: 536 ----------------FDMMVREF----RIEPQMEHYACMVD----LLGRAGLLQEASDI 571
D +V EF ++ PQ M++ LL AG + + S++
Sbjct: 548 LNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEV 607
Query: 572 VKNMPME 578
++ M E
Sbjct: 608 LQEMEEE 614
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 227/732 (31%), Positives = 374/732 (51%), Gaps = 86/732 (11%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP--------------- 90
Q+K++H ++I T N FL +++ Y + G L +ARNVF+ P
Sbjct: 23 QVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYS 82
Query: 91 -----------FDCKSSS--LLWNSILRVNVSNGLYENALKLYVKMRKLGVLG-DGFTFP 136
FD + + WNS+L NGL ++++Y M K G + + TF
Sbjct: 83 KLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFS 142
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
++ + S R G+ +H + + G+Q + + + L+ MYAK G ++D+ ++F++
Sbjct: 143 TML----ILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEE 198
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
+ KN + +N M +G A +LF M E + ++WT++++ + G +E
Sbjct: 199 IPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMP----EKDSISWTTIITGLTQNGLFKEA 254
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
+D F M G + VL+ C A GK IH ++I+ ++D +FV +AL+ +
Sbjct: 255 VDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDM 314
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
Y K +VK A+ +F ++ KN
Sbjct: 315 YCKCRNVKYAEAVFRKMRHKN--------------------------------------- 335
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
VISW+A++ + NG EEA+ +F MQ ++ + T+ ++S CA A+L G + HG
Sbjct: 336 VISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHG 395
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
+ + + V N L+ +Y KCG LE H +F +++ +D ++W +++SGY G
Sbjct: 396 QALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANE 455
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
++ FE M+ G PDGV FV VLSACS AGLV +G F+ MV+E RI P +HY CM+
Sbjct: 456 TISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMI 515
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
DLL RAG L+EA + + MP P+A W TLL+SCR++ N ++ + A + L +
Sbjct: 516 DLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPA 575
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKN 676
SY+LLS+IYAA G+W+D AK+R + G+KK G SWI+ K K+H+FS+ +
Sbjct: 576 SYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQ 635
Query: 677 VCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHRIVGFRNL--- 733
+ LE L L+M +G VPD +L +V++ ++I+ N S+ + F L
Sbjct: 636 IYAKLESLYLKMIEEGYVPDMSFVL------HDVEKSEKIKMLNHHSEKLAIAFGLLFIP 689
Query: 734 -KLGLRLLLSLR 744
L +R++ +LR
Sbjct: 690 DGLQIRVVKNLR 701
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 191/432 (44%), Gaps = 82/432 (18%)
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
L C + K +H +I+ F+ N LI YGK GD+K A+N+F I +
Sbjct: 9 TAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQ 68
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
N+ SWN L+++Y++ G + VF SM +V+SW++++ +A NG E
Sbjct: 69 PNLFSWNTLLSAYSKLGYLQDMQRVFD--------SMPNHDVVSWNSLLSGYAGNGLISE 120
Query: 396 ALDLFRKM-QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
++ ++ M + V N +T S +L + + +++GR+IHG + + + V + L+
Sbjct: 121 SVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLV 180
Query: 455 NMYMKCGCLEEGHLVFEQI-------------------------------EKKDLITWNS 483
+MY K G + + + +FE+I +KD I+W +
Sbjct: 181 DMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTT 240
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE- 542
+I+G NGL + A+ F+EM GF D F +VL+AC ++EG++I ++R
Sbjct: 241 IITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTD 300
Query: 543 ---------------------------FRIEPQMEH-----YACMVDLLGRAGLLQEASD 570
FR +M H + M+ G+ G +EA
Sbjct: 301 YQDNIFVGSALLDMYCKCRNVKYAEAVFR---KMRHKNVISWTAMLVGYGQNGYSEEAVR 357
Query: 571 IVKNM---PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF--GLITETTGSYMLLSNIY 625
I +M + P+ + G++++SC + + Q GLI T S L++ +Y
Sbjct: 358 IFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALIT-LY 416
Query: 626 AASGRWEDAAKV 637
G E A ++
Sbjct: 417 GKCGSLEHAHQL 428
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/687 (31%), Positives = 361/687 (52%), Gaps = 87/687 (12%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP---------------- 90
++ VH +I +G + F+ R++ Y++ G L D R VF+ P
Sbjct: 39 VRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTK 98
Query: 91 --FDCKSSSLL----------WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLV 138
F ++ SL WNS++ + E AL + M K G + + ++F V
Sbjct: 99 LGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASV 158
Query: 139 IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR 198
+ AC + + G VH+ + + F +V+I + L+ MY+K G ++D+ ++FD++
Sbjct: 159 LSACSGLNDM----NKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG 214
Query: 199 VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD 258
+N +S W SL++ + G E +D
Sbjct: 215 DRNVVS-----------------------------------WNSLITCFEQNGPAVEALD 239
Query: 259 LFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG-FEDYVFVKNALICVY 317
+F MM + +E +A V+S CA L+A +G+ +HG V+K + + + NA + +Y
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
K +K A+ +F + +N+++ ++I+ YA A A +F++ M NV
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTK--------MAERNV 351
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
+SW+A+I + NG EEAL LF ++ V + + +L CA+ A L++G + H H
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 411
Query: 438 VVRVSMN------KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
V++ +I V N L++MY+KCGC+EEG+LVF ++ ++D ++WN+MI G+ N
Sbjct: 412 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 471
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G G AL F EM+E+G KPD + + VLSAC HAG V EGR F M R+F + P +H
Sbjct: 472 GYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH 531
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
Y CMVDLLGRAG L+EA +++ MPM+P++ +WG+LL +C++H+N + + +A ++ +
Sbjct: 532 YTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVE 591
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
+G Y+LLSN+YA G+WED VR S + +G+ K G SWI+++ H+F +
Sbjct: 592 PSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSH 651
Query: 672 SDLKNVCEVLEELALQMENKGCVPDND 698
K + +L+ L +M P+ D
Sbjct: 652 PRKKQIHSLLDILIAEMR-----PEQD 673
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 223/756 (29%), Positives = 367/756 (48%), Gaps = 95/756 (12%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+++ C + + K VH QL G +L +++ Y++FG + VF
Sbjct: 84 IIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTL-- 141
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ W+S++ N A + +M+ + + TF +++AC
Sbjct: 142 -RDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSM----LE 196
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
+ +H V G + +V + LI MY+K G++S + ++F K++ +N +SW + A
Sbjct: 197 KAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANA 256
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSS--------------------------- 246
+ + A EL+++M G+ PN VT+ SLL+S
Sbjct: 257 QHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVV 316
Query: 247 --------HARCGRLEETMDLFDMMRKRGIEVGAEAIA---------------------- 276
+ +C +++ + FD M KR + + IA
Sbjct: 317 VANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLER 376
Query: 277 --------------VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
+L C+ A G+ IH + K GFE ++ A+ +Y K G
Sbjct: 377 MRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGS 436
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
+ A+ +FS++E KN+V+W +L+T Y + G A +VFS+ M NV+SW+
Sbjct: 437 IYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSE--------MSTRNVVSWNL 488
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS 442
+I +A +G + +L M++ + VTI +L C +AL G+ +H V++
Sbjct: 489 MIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLG 548
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFE 502
+ + +V L+ MY KCG + E VF++I +D + WN+M++GYG +G+G A+ F+
Sbjct: 549 LESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFK 608
Query: 503 EMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRA 562
M++ P+ + F AV+SAC AGLV EGR IF +M +FR++P +HY CMVDLLGRA
Sbjct: 609 RMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRA 668
Query: 563 GLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLS 622
G LQEA + ++ MP EP+ VW LL +C+ H N +AE A I L Y+ LS
Sbjct: 669 GRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLS 728
Query: 623 NIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLE 682
NIYA +GRW+D+ KVR KGLKK G+S IE+ +IH F + + ++ ++ LE
Sbjct: 729 NIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAELE 788
Query: 683 ELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRA 718
L +M+ G PD +L +V +Q+ RA
Sbjct: 789 MLTKEMKEAGYTPDMRFVL------HDVDEVQKERA 818
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/532 (24%), Positives = 243/532 (45%), Gaps = 91/532 (17%)
Query: 111 GLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN 170
G + A++L +++ G+L + T+ +I C + RF G++VH + ++G +
Sbjct: 57 GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLR----RFEDGKMVHKQLDELGLAID 112
Query: 171 VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
+++ N LI Y+K G ++ ++F ++ +++ ++W+ M + +A N A + F+RM+
Sbjct: 113 IYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKD 172
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
+EPN +T+ S+L + C + +
Sbjct: 173 ANIEPNRITFLSILKA-----------------------------------CNNYSMLEK 197
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
+ IH V G E V V ALI +Y K G++ +A +F +++E+N+VSW A+I + A+
Sbjct: 198 AREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQ 257
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
+EA E++ ++ L G PN +++ +++ +
Sbjct: 258 HRKLNEAFELYEKM--LQAGI--SPNAVTFVSLLNS------------------------ 289
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
C ALN GR IH H+ + +++V N L+ MY KC C+++ F
Sbjct: 290 -----------CNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETF 338
Query: 471 EQIEKKDLITWNSMISGYGMNGLGEN-----ALATFEEMIEAGFKPDGVAFVAVLSACSH 525
+++ K+D+I+W++MI+GY +G + E M G P+ V F+++L ACS
Sbjct: 339 DRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSV 398
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
G + +GR+I + + E + ++ + G + EA + M N W
Sbjct: 399 HGALEQGRQIH-AEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVAWA 456
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
+LL + AE + S+ + T S+ L+ YA SG D AKV
Sbjct: 457 SLLTMYIKCGDLTSAEKVFSE---MSTRNVVSWNLMIAGYAQSG---DIAKV 502
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 168/338 (49%), Gaps = 18/338 (5%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
+ SL ++ +C +I++ +QV +++ N + A +L++Y + G L A VF
Sbjct: 420 DRSLQTAIFNMYAKCGSIYEAEQVFSKM----ENKNVVAWASLLTMYIKCGDLTSAEKVF 475
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+ + WN ++ +G +L M+ G D T ++ AC +
Sbjct: 476 SEMS---TRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALS 532
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
+ G++VH +++G + + + LIGMY+K G+++++ +FDK+ ++ ++WN
Sbjct: 533 AL----ERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWN 588
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
M +G+ + A++LFKRM E + PN +T+T+++S+ R G ++E ++F +M++
Sbjct: 589 AMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQED 648
Query: 267 -GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
++ G + ++ + L + F+ + E + V +AL+ H +V++
Sbjct: 649 FRMKPGKQHYGCMVDL---LGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQL 705
Query: 326 AQ---NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
A+ + +E N + L YA+AG D++ +V
Sbjct: 706 AEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKV 743
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/657 (31%), Positives = 353/657 (53%), Gaps = 50/657 (7%)
Query: 68 RVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG 127
R ++ + R GR+ DA +F P + S+ +N++L +NG AL + + +
Sbjct: 112 RAITAHMRAGRVPDAERLFAAMP---RRSTSTYNTMLAGYAANGRLPQALSFFRSIPR-- 166
Query: 128 VLGDGFTFPLVIRACKFMGSF------------RFRFSFGQIVHNHV-----------LQ 164
D F++ ++ A S + S+ ++ +H
Sbjct: 167 --PDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFD 224
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
+ + + N ++ Y + G++ ++ +LFD + ISWN + +G+ + A ++
Sbjct: 225 LAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKM 284
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
F +M + + V+W +++S +AR G + E LFD+ R + A+V +
Sbjct: 285 FNKMP----QRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTW---TAIVSGYAQN 337
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
+ +V K NA++ Y + ++ A+ LF + +N+ SWN +
Sbjct: 338 GMLEEAKRVFDAMPDKNAVS-----WNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTM 392
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+T YA+AG+ DEA +F G M + + +SW+A++ A++ G EE L LF++M
Sbjct: 393 LTGYAQAGMLDEARAIF--------GMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMG 444
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
N + +LS CA+ AAL G ++H +++ V N LL MY KCG +E
Sbjct: 445 RCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSME 504
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
E H FE++E++D+++WN+MI+GY +G G+ AL F+ M + KPD + V VL+ACS
Sbjct: 505 EAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACS 564
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
H+GLV +G F M R+F + + EHY CM+DLLGRAG L EA +++K+MP EP++ +W
Sbjct: 565 HSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMW 624
Query: 585 GTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTK 644
G LL + R+H+N+++ A +IF L E G Y+LLSNIYA+SG+W D K+R +
Sbjct: 625 GALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHER 684
Query: 645 GLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
G+KKV G SWIEV+ K+H FS G+S+ + +++ LE+L ++M+ G V D++L
Sbjct: 685 GVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVL 741
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 177/390 (45%), Gaps = 43/390 (11%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N I + + G++ D+ +LF + ++ ++N M +G+A N AL F+ +
Sbjct: 111 NRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP----R 166
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-----GIEVGAEAIAVVLSVCA---DLA 286
P+ ++ +LL + L + LFD M + + + + A ++S+ DLA
Sbjct: 167 PDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLA 226
Query: 287 ADHMGKVIHG----FVIKGGFEDY-----------VFVKNALICVYGKHGDVKVAQNLFS 331
+ +G +V G ++ NAL+ Y + ++ AQ +F+
Sbjct: 227 PEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFN 286
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
++ ++++VSWN +++ YA G EA +F D V +W+A++ +A NG
Sbjct: 287 KMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRD--------VFTWTAIVSGYAQNG 338
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
EEA +F M N+V+ + +++ + + +E+ + +N+ N
Sbjct: 339 MLEEAKRVFDAMP----DKNAVSWNAMMAAYVQRRMMEEAKELFDAMP----CRNVASWN 390
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
+L Y + G L+E +F + +KD ++W +M++ Y G E L F+EM G
Sbjct: 391 TMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWV 450
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
+ AF VLS C+ + G ++ +++
Sbjct: 451 NRSAFACVLSTCADIAALECGMQLHSRLIK 480
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 139/291 (47%), Gaps = 28/291 (9%)
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
I G + V +N I + + G V A+ LF+ + ++ ++N ++ YA G +A+
Sbjct: 99 ITGKPDMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQAL 158
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
F S+ RP+ S++ ++ A + + LF +M V +SV+ + +
Sbjct: 159 SFFR--------SIPRPDSFSYNTLLHALGVSSSLADVRALFDEMP----VKDSVSYNVM 206
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
+S A +++ R H ++ K+ + NG+L Y++ G ++E +F+ + D
Sbjct: 207 ISSHANHGLVSLAR----HYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTEWDA 262
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
I+WN++++GY E A F +M + D V++ ++S + G + E RR+FD+
Sbjct: 263 ISWNALMAGYVQRSQIEEAQKMFNKMPQR----DVVSWNTMVSGYARRGDMAEARRLFDV 318
Query: 539 M-VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+R+ + +V + G+L+EA + MP + NA W ++
Sbjct: 319 APIRDVFT------WTAIVSGYAQNGMLEEAKRVFDAMP-DKNAVSWNAMM 362
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 106/252 (42%), Gaps = 24/252 (9%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
N S C +L C I L+ Q+H++LI G F+ +L++Y + G + +A
Sbjct: 451 NRSAFAC---VLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAH 507
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
+ FE + + WN+++ +G + AL+++ MRK D T V+ AC
Sbjct: 508 SAFEEME---ERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACS 564
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NY 202
G S+ +H G +I + + G++ ++ L + + +
Sbjct: 565 HSGLVEKGISYFYSMHR---DFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDS 621
Query: 203 ISWNMMFSGFALNFDCD----GALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETM 257
W + ++ + + A ++F+ LEP LLS+ +A G+ +
Sbjct: 622 TMWGALLGASRIHRNSELGRNAAEKIFE------LEPENAGMYVLLSNIYASSGKWRDVD 675
Query: 258 DLFDMMRKRGIE 269
+ +M +RG++
Sbjct: 676 KMRHIMHERGVK 687
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 15/193 (7%)
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
++ +N + +M+ G + + +F + ++ T+N+M++GY NG AL+ F +
Sbjct: 106 EVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRSIP 165
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
+PD ++ +L A + + + R +FD M + + Y M+ GL+
Sbjct: 166 ----RPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVS-----YNVMISSHANHGLV 216
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG-SYMLLSNI 624
A P E +A W +L + +N + E A ++F TE S+ L
Sbjct: 217 SLARHYFDLAP-EKDAVSWNGMLAA--YVRNGRIQE--ARELFDSRTEWDAISWNALMAG 271
Query: 625 YAASGRWEDAAKV 637
Y + E+A K+
Sbjct: 272 YVQRSQIEEAQKM 284
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/606 (34%), Positives = 339/606 (55%), Gaps = 19/606 (3%)
Query: 86 FETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
F T P + L +I+++ N L E L R+ G+ D T +++ C
Sbjct: 14 FRTNPRKPRRRPCLVEAIVKLCKKNKLNEAVSSLENLARR-GLRLDSRTLASLLQHCADS 72
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQ-GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
+ R G+ VH H+ G + + N LI MYAK G+ ++ K+FDK+ +N S
Sbjct: 73 RALRE----GKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYS 128
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
WN M SG+A A +LF +M E + V+W +++ +HA+CG +E + + R
Sbjct: 129 WNNMLSGYAKLGMIKPARKLFDKMP----EKDVVSWNTMVIAHAQCGYWDEALRFYSEFR 184
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
+ GI+ + A VL+VC L + + +HG ++ GF V + ++++ Y K G +
Sbjct: 185 QLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMG 244
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A+ LF E+ +++++W +++ YA+ G A E+F + M N +SW+A+I
Sbjct: 245 DARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVE--------MPEKNPVSWTALI 296
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
+A NG G +AL+LF KM L V + T S L CA A+L G++IH +++R++
Sbjct: 297 SGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQ 356
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK-DLITWNSMISGYGMNGLGENALATFEE 503
N +V + L++MY KCG L G VF+ + K D++ WN++IS +G GE A+ ++
Sbjct: 357 PNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDD 416
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M+ +G KPD + FV +L+ACSH+GLV +G F+ M ++ I P EHYAC++DLLGRAG
Sbjct: 417 MVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAG 476
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
+E D ++ MP +P+ VW LL CR+H + ++ A ++ L +++ +Y+LLS+
Sbjct: 477 CFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSS 536
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
IYA GRWE KVR + +KK SW+E++ K+H FS +S + + VLE+
Sbjct: 537 IYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENKVHSFSVSDSSHPLKEQIYSVLEQ 596
Query: 684 LALQME 689
LA QME
Sbjct: 597 LAGQME 602
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 144/618 (23%), Positives = 267/618 (43%), Gaps = 121/618 (19%)
Query: 37 LLQQC---KTIHQLKQVHNQLIVTG-ANASAFLAARVLSIYARFGRLFDARNVFETAP-- 90
LLQ C + + + K+VH L +TG FL+ ++++YA+ G+ +AR VF+
Sbjct: 65 LLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSAR 124
Query: 91 ------------------------FD--CKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
FD + + WN+++ + G ++ AL+ Y + R
Sbjct: 125 NLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFR 184
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
+LG+ +GF+F V+ C + + VH +L GF NV + + ++ Y K
Sbjct: 185 QLGIQCNGFSFAGVLTVCVKLK----EVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKC 240
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G M D+ KLFD++ ++ ++W M SG+A D A ELF M E N V+WT+L+
Sbjct: 241 GLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMP----EKNPVSWTALI 296
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
S +AR G + ++LF M + + L CA +A+ GK IH ++++ F+
Sbjct: 297 SGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQ 356
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEK-NIVSWNALITSYAEAGLCDEAVEVFSQ 363
V +ALI +Y K G + + + +F + K ++V WN +I++ A+ G +EA+++
Sbjct: 357 PNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDD 416
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
+ + S +P+ I++ ++ A + +G ++ L+ F M + S
Sbjct: 417 MVR----SGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPS----------Q 462
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
E A L+++ + GC EE V +Q+EK
Sbjct: 463 EHYAC------------------------LIDLLGRAGCFEE---VMDQLEKMP------ 489
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
+KPD + A+L C G + GR+ + ++
Sbjct: 490 -------------------------YKPDDRVWNALLGVCRIHGHIELGRKAAERLI--- 521
Query: 544 RIEPQMEHYACMVD----LLGRAGLLQEASDIVKNMPMEPN-AYVWGTLLNSCRMHKNTD 598
+EPQ ++ +LGR +Q+ ++ ++ A W + N +D
Sbjct: 522 ELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENKVHSFSVSD 581
Query: 599 VAEAMASQIFGLITETTG 616
+ + QI+ ++ + G
Sbjct: 582 SSHPLKEQIYSVLEQLAG 599
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 233/767 (30%), Positives = 391/767 (50%), Gaps = 122/767 (15%)
Query: 11 QFS-----PSNPSRPFSIITYNNSL-LDCFDH----LLQQCKTIHQLKQVHNQLIVTGAN 60
QFS P+ PSR ++ N + + ++H LL++C ++ +L+Q+ + G
Sbjct: 7 QFSTVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLY 66
Query: 61 ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY 120
F +++S++ R+G + +A VFE P D K ++L++++L+ + AL+ +
Sbjct: 67 QEHFFQTKLVSLFCRYGSVDEAARVFE--PIDSK-LNVLYHTMLKGFAKVSDLDKALQFF 123
Query: 121 VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
V+MR V + F +++ C R G+ +H +++ GF ++ + L M
Sbjct: 124 VRMRYDDVEPVVYNFTYLLKVCGDEAELR----VGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
YAK Q++++ K+FD++ ++ +SWN + +G++ N ALE+ K M E L+P+F+T
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 241 TSLLSS-----------------------------------HARCGRLEETMDLFDMMRK 265
S+L + +A+CG LE LFD M +
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299
Query: 266 RGI-------------EVGAEAIAV------------------VLSVCADLAADHMGKVI 294
R + E EA+ + L CADL G+ I
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
H ++ G + V V N+LI +Y K +V A ++F +++ + +VSWNA+I +A+ G
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRP 419
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
+A+ FSQ+ +P+ ++ +VI A
Sbjct: 420 IDALNYFSQMR----SRTVKPDTFTYVSVITAI--------------------------- 448
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
AE + + + IHG V+R ++KN+ V L++MY KCG + L+F+ +
Sbjct: 449 --------AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
++ + TWN+MI GYG +G G+ AL FEEM + KP+GV F++V+SACSH+GLV G +
Sbjct: 501 ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F MM + IE M+HY MVDLLGRAG L EA D + MP++P V+G +L +C++H
Sbjct: 561 CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
KN + AE A ++F L + G ++LL+NIY A+ WE +VR+S +GL+K G S
Sbjct: 621 KNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSM 680
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+E+K ++H F SG++ D K + LE+L ++ G VPD +++L
Sbjct: 681 VEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL 727
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/660 (32%), Positives = 352/660 (53%), Gaps = 25/660 (3%)
Query: 54 LIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLY 113
L + + A +++ +A GRL DA F+ P + ++L N+++ L
Sbjct: 85 LFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVP-PARRDTVLHNAMMSAFARASLA 143
Query: 114 ENALKLYVKMRKLGVL-GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVH 172
A+ ++ + G L D ++F +I A M + +H VL+ G +
Sbjct: 144 APAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHC--TQLHCSVLKSGAAAVLS 201
Query: 173 IVNELIGMYAKMGQMS---DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
+ N LI +Y K D+ K+ D++ K+ ++W M G+ D + A +F+ E
Sbjct: 202 VSNALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFE--E 259
Query: 230 LEGLEPNF-VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
++G F V W +++S + + G + +LF M + + VLS CA+
Sbjct: 260 VDG---KFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFF 316
Query: 289 HMGKVIHGFVIK--GGF--EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
GK +HG +I+ F E + V NAL+ +Y K G + +A+ +F + K++VSWN +
Sbjct: 317 VHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTI 376
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
++ Y ++G D+AVEVF M N +SW ++ + G E+AL LF +M+
Sbjct: 377 LSGYIDSGCLDKAVEVFK--------VMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMR 428
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
V T +G ++ C E AL GR++H H+V+ + N LL MY KCG +
Sbjct: 429 AEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVN 488
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
+ LVF + D ++WN+MIS G +G G AL F++M+ G PD ++F+ +L+AC+
Sbjct: 489 DARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACN 548
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
HAGLV+EG F+ M R+F I P +HYA ++DLLGR+G + EA D++K MP EP +W
Sbjct: 549 HAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIW 608
Query: 585 GTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTK 644
+L+ CR + + + A Q+F +I + G+Y+LLSN Y+A+GRW DAA+VR + +
Sbjct: 609 EAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDR 668
Query: 645 GLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G+KK G SWIEV KIH+F G++ + + V + LE + +M G VPD +L +M
Sbjct: 669 GVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDM 728
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 18/228 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+Q+H L+ G AS +L++YA+ G + DAR VF P S+ WN+++
Sbjct: 456 RQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP---NLDSVSWNAMISAL 512
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+G AL+L+ +M G+ D +F ++ AC G F + + + G
Sbjct: 513 GQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKR---DFGI 569
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMMFSGFALNFDCD----GAL 222
LI + + G++ ++ L + + S W + SG N D + A
Sbjct: 570 SPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAAD 629
Query: 223 ELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+LF+ + + +G T+ L ++++ GR + + +MR RG++
Sbjct: 630 QLFRMIPQHDG------TYILLSNTYSAAGRWVDAARVRKLMRDRGVK 671
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/622 (33%), Positives = 351/622 (56%), Gaps = 20/622 (3%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S + ++GR+ ++ FE PF + + W + + V NG A+KL++K+ + V
Sbjct: 124 LISGFMKYGRVRESMWYFERNPF---QNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEV 180
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ TF V+RAC +G F G V +++ G++ ++ + N LI + +MG++
Sbjct: 181 KPNKVTFTSVVRACANLGDF----GLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIH 236
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ ++FD++ K+ +SW + + + A +F M + N V+W+++++ +
Sbjct: 237 LAREVFDRMEEKDVVSWTAILDLYVEMDELGEARRIFDEMP----QRNEVSWSAMIARYC 292
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ G EE++ LF M + G + + +LS A + A G IHG V K GFE VF
Sbjct: 293 QSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVF 352
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V ++LI +Y K G+ K + LF I EKN+VSWNA++ Y+ G +EA +F+
Sbjct: 353 VSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFN------ 406
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
M N +SWSA+I + +E ++F +M L + N T S LL CA +A+L
Sbjct: 407 --IMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASL 464
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+ G+ +HG +V++ + + V L +MY K G +E VF ++ KK+ ++W +MI G
Sbjct: 465 DKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGL 524
Query: 489 GMNGLGENALATFEEMIE-AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
+GL E +L FEEM + + P+ V F+AVL ACSH+GLV++G F+ M + ++P
Sbjct: 525 AESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKP 584
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
+ H+ C+VD+L RAG L EA + + +MP +P W LL+ C+ +KN ++AE +A ++
Sbjct: 585 KGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKL 644
Query: 608 FGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG 667
+ + + Y+LLSNIYA++GRW D KVR K KGLKK G SW+E++ ++H F S
Sbjct: 645 WEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKLMKAKGLKKSGGCSWVEIRDRVHSFYSE 704
Query: 668 NSLQSDLKNVCEVLEELALQME 689
+ S + E+LE L +M+
Sbjct: 705 DGAHSQSAEIYEILELLGYEMK 726
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/521 (26%), Positives = 246/521 (47%), Gaps = 57/521 (10%)
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
S+L+ + GL + L+ + K G+ + + + I+ ++R QI +
Sbjct: 26 SLLKNLTNQGLIRDGSALHAHLFKTGISSEQY---ISIKLLIMYLNYRKSAEADQISKDF 82
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
GF VH N +I + G + ++ KLFD++ N ISW + SGF +
Sbjct: 83 D---GFDLVVH--NCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRES 137
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
+ F+R + N V+WT+ +S + + G E M LF + + ++ V+
Sbjct: 138 MWYFERNPFQ----NVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRA 193
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
CA+L +G + G ++K G+E + V N+LI + + G++ +A+ +F +EEK++VSW
Sbjct: 194 CANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSW 253
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
A++ Y E EA +F + M + N +SWSA+I + +G EE+L LF
Sbjct: 254 TAILDLYVEMDELGEARRIFDE--------MPQRNEVSWSAMIARYCQSGYPEESLRLFC 305
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+M N S +LS A AL G IHGHV ++ K++ V + L++MY KCG
Sbjct: 306 RMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCG 365
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA------------------------ 497
++G +F+ I +K++++WN+M+ GY +NG E A
Sbjct: 366 ETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLD 425
Query: 498 -------LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
F EMI G P+ F ++L AC+ +++G+ + +V ++ Q +
Sbjct: 426 CEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIV---KLGIQCD 482
Query: 551 HY--ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
Y + D+ ++G ++ + + MP + N W ++
Sbjct: 483 TYVGTALTDMYAKSGDIESSKKVFNRMP-KKNEVSWTAMIQ 522
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 178/371 (47%), Gaps = 35/371 (9%)
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIE----VGAEAIAVVLSVCADLAADHMGKVI 294
T SLL + G + + L + K GI + + + + L+ AD + K
Sbjct: 23 TCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDF 82
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
GF D V V N +I + G++ A+ LF E+ + N +SW ALI+ + + G
Sbjct: 83 DGF-------DLV-VHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRV 134
Query: 355 DEAVEVFSQLEKLDGGSMERP--NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
E++ F + P NV+SW+A I + NG EA+ LF K+ ++V N
Sbjct: 135 RESMWYFER----------NPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNK 184
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
VT + ++ CA +G + G +V+ ++ V N L+ + ++ G + VF++
Sbjct: 185 VTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDR 244
Query: 473 IEKKDLITWNSMISGY-GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
+E+KD+++W +++ Y M+ LGE A F+EM + + V++ A+++ +G E
Sbjct: 245 MEEKDVVSWTAILDLYVEMDELGE-ARRIFDEMPQR----NEVSWSAMIARYCQSGYPEE 299
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI---VKNMPMEPNAYVWGTLL 588
R+F M++E +P + ++ ++ L LQ +I V + E + +V +L+
Sbjct: 300 SLRLFCRMIQE-GFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLI 358
Query: 589 N-SCRMHKNTD 598
+ C+ + D
Sbjct: 359 DMYCKCGETKD 369
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 183/421 (43%), Gaps = 62/421 (14%)
Query: 31 LDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
+ CF +L ++ L+ +H + G F+++ ++ +Y + G D R +F+
Sbjct: 316 ISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFD 375
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENA------------------------------- 116
T + + + WN+++ NG E A
Sbjct: 376 TI---LEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEM 432
Query: 117 LKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNE 176
+++ +M LG + + TF ++ AC S G+ +H ++++G Q + ++
Sbjct: 433 FEVFNEMILLGEIPNKSTFSSLLCACASTAS----LDKGKNLHGKIVKLGIQCDTYVGTA 488
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME-LEGLEP 235
L MYAK G + S K+F+++ KN +SW M G A + + +L LF+ ME + P
Sbjct: 489 LTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAP 548
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLAADHMGKVI 294
N V + ++L + + G +++ + F+ M G++ V+ + + G++
Sbjct: 549 NEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLS-----RAGRLF 603
Query: 295 HG--FVIKGGFEDYVFVKNALI--CVYGKHGDV--KVAQNLFSEIEEKNIVSWNALITSY 348
F+ F+ AL+ C K+ ++ +VA L+ E+ EKN + L Y
Sbjct: 604 EAEEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLW-EMAEKNCAGYVLLSNIY 662
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISW----SAVIGAFASNGRGEEALDLFRKMQ 404
A AG + ++V +L K G +++ SW V ++ +G ++ +++ ++
Sbjct: 663 ASAGRWRDVLKV-RKLMKAKG--LKKSGGCSWVEIRDRVHSFYSEDGAHSQSAEIYEILE 719
Query: 405 L 405
L
Sbjct: 720 L 720
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/698 (31%), Positives = 357/698 (51%), Gaps = 60/698 (8%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPF---------------- 91
+ VH +I +G + R++ IY++ +L AR +F+ P
Sbjct: 33 RPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAA 92
Query: 92 -DCKSS-------------SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPL 137
D K S S+ +N+++ N A++L+ M++ D +TF
Sbjct: 93 GDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTS 152
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ---------MS 188
V+ A + + Q +H V++ G ++N LI Y K M+
Sbjct: 153 VLGALALVAE---KEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMA 209
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNF-VTWTSLLSSH 247
++ KLFD++ ++ +SW + +G+ N D D A E L G V W +++S +
Sbjct: 210 EARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEF-----LNGTSKKLGVAWNAMISGY 264
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK----GGF 303
A G E ++F M I++ V+SVCA+ +GK +H + +K
Sbjct: 265 AHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAP 324
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
+ + V NALI Y K G V +AQ +F+++ E+++VSWN +++ Y DEA F++
Sbjct: 325 DVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNE 384
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
M N++SW +I A G EEAL F +M+L +G + C+
Sbjct: 385 --------MPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCS 436
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
+L GR++H VVR ++ N L+ MY +CG ++ H +F + D I+WN+
Sbjct: 437 VLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNA 496
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
MI+ G +G G A+ FEEM++ G PD ++F+ V+SACSHAGLV EGR+ FD M +
Sbjct: 497 MIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVY 556
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+ P EHYA ++DLL RAG EA +++++MP EP A +W LL CR+H N D+
Sbjct: 557 GVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEA 616
Query: 604 ASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHM 663
A ++F L + G+Y+LLSN+YA +G+W D AKVR + +G+KK G SWIEV+ K+H
Sbjct: 617 AERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHS 676
Query: 664 FSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
F G++ +++ + LE+L L+M G VPD +L
Sbjct: 677 FLVGDANHPEVRQIYNYLEQLVLEMRKIGYVPDTKCVL 714
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 220/488 (45%), Gaps = 57/488 (11%)
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
+S + VH H++ GFQ HI+N LI +Y+K +++ + LFD++ + ++ + +
Sbjct: 29 YSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAA 88
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
++ D + ++F L G+ + V + +++++++ ++LF M++
Sbjct: 89 YSAAGDLKLSRKIFSDTPL-GMRDS-VFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPD 146
Query: 272 AEAIAVVLSVCADLA-ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV----- 325
VL A +A + + +H V+K G V NALI Y K
Sbjct: 147 NYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSS 206
Query: 326 ----AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
A+ LF E+ ++ +SW +IT Y + D A E + K G ++W+
Sbjct: 207 LMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLG--------VAWN 258
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
A+I +A G EA ++FRKM ++K+ + T + ++SVCA + +G+E+H + ++
Sbjct: 259 AMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKT 318
Query: 442 SMNK----NILVQNGLLNMYMKCG-------------------------------CLEEG 466
N + V N L+ Y KCG C++E
Sbjct: 319 VANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEA 378
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
F ++ +K++++W MISG G E AL F M GF+P AF + +CS
Sbjct: 379 KSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVL 438
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
G + GR++ +VR + E + ++ + R G++ A + NMP +A W
Sbjct: 439 GSLKHGRQLHAQVVR-YGYESSLSAGNALITMYARCGVVDAAHCLFINMPCV-DAISWNA 496
Query: 587 LLNSCRMH 594
++ + H
Sbjct: 497 MIAALGQH 504
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 22/291 (7%)
Query: 262 MMRKRGIEVGAEAIAVVLSVCA--DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
M I A +L +C + + + +H +I GF+ + N LI +Y K
Sbjct: 1 MTTPDSIRTAANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSK 60
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
+ A+ LF EI + +IV+ LI +Y+ AG + ++FS + + +
Sbjct: 61 SSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDT------PLGMRDSVF 114
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG-REIHGHV 438
++A+I A++ N G A++LF MQ ++ T + +L A A +++H V
Sbjct: 115 YNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAV 174
Query: 439 VRVSMNKNILVQNGLLNMYMKC---------GCLEEGHLVFEQIEKKDLITWNSMISGYG 489
V+ V N L++ Y+KC + E +F+++ +D ++W ++I+GY
Sbjct: 175 VKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYV 234
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
N N L +E + K GVA+ A++S +H GL E +F M+
Sbjct: 235 KN----NDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMI 281
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 116/255 (45%), Gaps = 15/255 (5%)
Query: 41 CKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
C + LK Q+H Q++ G +S ++++YAR G + A +F P C +
Sbjct: 435 CSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMP--C-VDA 491
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
+ WN+++ +G A++L+ +M K G+L D +F VI AC G + +
Sbjct: 492 ISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDS 551
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMMFSGFALNF 216
+HN G + +I + + G+ S++ ++ + + + W + +G ++
Sbjct: 552 MHN---VYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHG 608
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGI--EVGAE 273
+ D +E +R L L+P LLS+ +A G+ + + +MR RG+ E G
Sbjct: 609 NIDLGIEAAER--LFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCS 666
Query: 274 AIAVVLSVCADLAAD 288
I V V + L D
Sbjct: 667 WIEVENKVHSFLVGD 681
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 237/750 (31%), Positives = 378/750 (50%), Gaps = 73/750 (9%)
Query: 38 LQQCKTIHQL-----KQVHNQLIVTGANASAFLAARVLSIYARFG------RLFD----- 81
LQQC + + + VH +I +G ++ R++ +Y + LFD
Sbjct: 20 LQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQP 79
Query: 82 --------------------ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYV 121
AR +F P + + + +N+++ N A++L+
Sbjct: 80 DIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDT-VCYNAMITGYSHNNDGFGAIELFR 138
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
+ + G D FTF V+ A + + Q +H V++ G ++N L+ ++
Sbjct: 139 DLLRNGFRPDNFTFTSVLGALALIVEDEKQ---CQQIHCAVVKSGSGFVTSVLNALLSVF 195
Query: 182 AKMGQ---------MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG 232
K M+ + KLFD++ ++ +SW M +G+ N + D A R L+G
Sbjct: 196 VKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAA-----RQFLDG 250
Query: 233 L-EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMG 291
+ E V W +++S + G E +++F M GI+ VLS CA+ G
Sbjct: 251 MTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHG 310
Query: 292 KVIHGFVIK----GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
K +H ++++ + + V NAL +Y K G V A+ +F+++ K++VSWNA+++
Sbjct: 311 KQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSG 370
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
Y AG DEA F + M N+++W+ +I A NG GEE+L LF +M+
Sbjct: 371 YVNAGRIDEAKSFFEE--------MPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEG 422
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
+G + CA AAL GR++H +VR+ + ++ N L+ MY KCG +E H
Sbjct: 423 FEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAH 482
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
+F + D ++WN+MI+ G +G G AL FE M++ PD + F+ VLS CSHAG
Sbjct: 483 CLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAG 542
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
LV EG R F M + I P +HYA M+DLL RAG EA D+++ MP+EP +W L
Sbjct: 543 LVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEAL 602
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
L CR+H N D+ A ++F L+ + G+Y+LLSN+YA GRW+D AKVR + KG+K
Sbjct: 603 LAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVK 662
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGK 707
K G SWIEV+ K+H+F + + +++ V LEEL L+M G +PD +L +M +
Sbjct: 663 KEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESE 722
Query: 708 KNVKRIQRIRADNIKSKHRIVGFRNLKLGL 737
Q+ + S+ VGF LKL L
Sbjct: 723 ------QKEYVLSTHSEKLAVGFGLLKLPL 746
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 173/380 (45%), Gaps = 36/380 (9%)
Query: 13 SPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIV---TGANASAFLAARV 69
+ PS FS+ + NN+L L +C + + +QV NQ+ V NA +
Sbjct: 320 TEPRPSLDFSL-SVNNALAT----LYWKCGKVDEARQVFNQMPVKDLVSWNA-------I 367
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL 129
LS Y GR+ +A++ FE P + + L W ++ NG E +LKL+ +M+ G
Sbjct: 368 LSGYVNAGRIDEAKSFFEEMP---ERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFE 424
Query: 130 GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD 189
+ F I AC ++ + G+ +H ++++GF ++ N LI MYAK G +
Sbjct: 425 PCDYAFAGAIIACAWLAALM----HGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEA 480
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
+ LF + + +SWN M + + ALELF+ M E + P+ +T+ ++LS+ +
Sbjct: 481 AHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSH 540
Query: 250 CGRLEETMDLFDMMRK-RGIEVGAEAIAVVLS-VCADLAADHMGKVIHGFVIKGGFEDYV 307
G +EE F M GI G + A ++ +C +I ++ G
Sbjct: 541 AGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPP--- 597
Query: 308 FVKNALICVYGKHGD----VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
+ AL+ HG+ ++ A+ LF E+ ++ ++ L YA G D+ +V
Sbjct: 598 -IWEALLAGCRIHGNMDLGIQAAERLF-ELMPQHDGTYVLLSNMYATVGRWDDVAKVRKL 655
Query: 364 LEKLDGGSMERPNVISWSAV 383
+ D G + P SW V
Sbjct: 656 MR--DKGVKKEPGC-SWIEV 672
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/559 (35%), Positives = 324/559 (57%), Gaps = 18/559 (3%)
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+++H+H ++ + N LI Y+K + + K+F + VKN SWN++ S ++
Sbjct: 32 LGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLPVKNTHSWNIIISAYS 91
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ + A L +M +PN V++ SL+S G +E++++F M K+ V +
Sbjct: 92 RSGLFNEAHNLLDQMP----KPNLVSYNSLISGLGHHGFRKESLNVFKTMLKQCSNVLFD 147
Query: 274 AIAVV--LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
+V + CA L A + + +HG I G + + NALI YGK G+ ++ ++FS
Sbjct: 148 EFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDISFSIFS 207
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+ E+++VSW +++ +YA+A ++A +FSQ M+ N +SW+A+I FA NG
Sbjct: 208 RMPERDVVSWTSMVAAYAQASRLEDAHWLFSQ--------MQEKNTVSWTALIAGFAQNG 259
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR---VSMNKNIL 448
RG+EAL LF +M+ + ++ T + +LS CA+ A + G+EIHGH++R + NI
Sbjct: 260 RGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIF 319
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
+ N L++MY KCG + +F+ + +KD+++WNS+I+G+ NG GE +LA FE MIEA
Sbjct: 320 ILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEAD 379
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+P+ V F+ +LSAC H GLV+EG RI D M +++ + P+ +HYA M+DLLGR L+EA
Sbjct: 380 IRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEA 439
Query: 569 SDIVKNMPM-EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
++K P + +WG LL +CR+H N D+A A +F L Y+++ NIYAA
Sbjct: 440 MGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMVYNIYAA 499
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
+ RW++A +VR +GL+K A SWIEV+ H F + + V EV+ L Q
Sbjct: 500 ASRWDEARQVRRLMMERGLRKEAACSWIEVRNTRHQFVAKERSHCQINEVYEVIHNLVDQ 559
Query: 688 MENKGCVPDNDIILWEMMG 706
M + G +P + L E G
Sbjct: 560 MYDSGYLPCHSSFLPEEDG 578
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 174/352 (49%), Gaps = 54/352 (15%)
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
++S C +GK++H IK F+ N LI Y K ++ A +F + KN
Sbjct: 20 LISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLPVKN 79
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
SWN +I++Y+ +GL +EA + Q M +PN++S++++I +G +E+L
Sbjct: 80 THSWNIIISAYSRSGLFNEAHNLLDQ--------MPKPNLVSYNSLISGLGHHGFRKESL 131
Query: 398 DLFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
++F+ M Q + V+ + T+ L+ CA A + R++HG + + +N NI++ N L++
Sbjct: 132 NVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALID 191
Query: 456 MYMKCG-------------------------------CLEEGHLVFEQIEKKDLITWNSM 484
Y KCG LE+ H +F Q+++K+ ++W ++
Sbjct: 192 AYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTAL 251
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I+G+ NG G+ AL FE+M E G P F +VLSAC+ L+ G+ I ++R
Sbjct: 252 IAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTC 311
Query: 545 IEPQMEHYAC-------MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
I+ Y C ++D+ + G ++ A+ + K M E + W +L+
Sbjct: 312 ID-----YFCNIFILNALIDMYCKCGQMRSATTLFKGM-HEKDIVSWNSLIT 357
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 152/301 (50%), Gaps = 20/301 (6%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+++ YA+ RL DA +F + +++ W +++ NG + AL L+ +MR+ G+
Sbjct: 220 MVAAYAQASRLEDAHWLFSQMQ---EKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGI 276
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ---MGFQGNVHIVNELIGMYAKMG 185
FTF V+ AC + + G+ +H H+++ + + N+ I+N LI MY K G
Sbjct: 277 PPSAFTFASVLSACADLA----LIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCG 332
Query: 186 QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
QM + LF + K+ +SWN + +GFA N + +L +F+RM + PN VT+ LLS
Sbjct: 333 QMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEADIRPNHVTFLGLLS 392
Query: 246 SHARCGRLEETMDLFDMMRK-RGIEVGAEAIAVVLSVCA--DLAADHMGKVIHGFVIKGG 302
+ G + E + + D M K G+ ++ A+++ + + + MG + KG
Sbjct: 393 ACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLLGRNNRLEEAMGLIKRA--PKGS 450
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQ---NLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
D+V + AL+ HG++ +A+ + ++E N + + YA A DEA +
Sbjct: 451 --DHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARYVMVYNIYAAASRWDEARQ 508
Query: 360 V 360
V
Sbjct: 509 V 509
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
S L+S C + L +G+ +H H ++ ++ + N L++ Y KC ++ H VF +
Sbjct: 18 SSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLPV 77
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
K+ +WN +IS Y +GL A ++M KP+ V++ +++S H G E +
Sbjct: 78 KNTHSWNIIISAYSRSGLFNEAHNLLDQMP----KPNLVSYNSLISGLGHHGFRKESLNV 133
Query: 536 FDMMVRE 542
F M+++
Sbjct: 134 FKTMLKQ 140
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/664 (33%), Positives = 365/664 (54%), Gaps = 28/664 (4%)
Query: 42 KTIHQLKQVHNQLIVTG------ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
+T+ Q ++H +L +G +A L + V + L A ++F+ P
Sbjct: 10 RTVRQAAELHARLTTSGHLLLHPPSARHLLNSLVNCLEPHPLHLRYALHLFDRMP----P 65
Query: 96 SSLLWNSILRVNVSNGLYEN-ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
S+ L+++ LR G + L+ +MR+ GV DGFTF + + C S
Sbjct: 66 STFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFK-CSSSSSRPHSLLL 124
Query: 155 GQIVHNHVLQMGFQGNVHIV-NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
++H L+ V N LI MY ++G +D+ + FD++ VK+ ++W M+ SG A
Sbjct: 125 CTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLA 184
Query: 214 -LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
+ CD L L + + + ++WTSL+++++R R E + F M GI
Sbjct: 185 KMGMLCDTQL-LLSQAPVR----DVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDE 239
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ VLS CA L +G+ +H V + G + ALI +Y K GD AQ +F
Sbjct: 240 VTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDA 299
Query: 333 IEE-KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+ SWNA+I Y + G D A +F ++E D +I++++++ + +G
Sbjct: 300 LGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRD--------IITFNSMMTGYIHSG 351
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
+ EAL LF M+ + ++ T+ LL+ CA AL GR +H + + + +I +
Sbjct: 352 QLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGT 411
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
LL+MYMKCG ++E +VF+++ K+D+ TW +MI+G NG+G+ AL F +M GF+P
Sbjct: 412 ALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQP 471
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
+ V+++AVL+ACSH+ L+NEGR FD M + I PQ+EHY CM+DLLGR+GLL EA D+
Sbjct: 472 NSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDL 531
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
VK MP++PNA +W ++L++CR+HK+ D+A+ A + L + G Y+ L NIY S +W
Sbjct: 532 VKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQW 591
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
E+A+K+R+ + + +KK AG S I V ++H F + + + +LEE++ ++++
Sbjct: 592 ENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSL 651
Query: 692 GCVP 695
G P
Sbjct: 652 GYSP 655
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 220/664 (33%), Positives = 364/664 (54%), Gaps = 28/664 (4%)
Query: 42 KTIHQLKQVHNQLIVTG------ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
+T+ Q ++H +L +G +A L + V + L A ++F+ P
Sbjct: 10 RTVRQAAELHARLTTSGHLLLHPPSARHLLNSLVNCLEPHPLHLRYALHLFDRMP----P 65
Query: 96 SSLLWNSILRVNVSNGLYEN-ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
S+ L+++ LR G + L+ +MR+ GV DGFTF + + C S
Sbjct: 66 STFLFDTALRACSRAGSDPHRPFLLFRRMRRAGVRPDGFTFHFLFK-CSSSSSRPHSLLL 124
Query: 155 GQIVHNHVLQMGFQGNVHIV-NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
++H L+ V N LI MY ++G +D+ + FD++ VK+ ++W M+ SG A
Sbjct: 125 CTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLA 184
Query: 214 -LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
+ CD L L + + ++WTSL+++++R R E + F M GI
Sbjct: 185 KMGMLCDTQLLLS-----QAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDE 239
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ VLS CA L +G+ +H V + G + ALI +Y K GD AQ +F
Sbjct: 240 VTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDA 299
Query: 333 IEE-KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+ SWNA+I Y + G D A +F ++E D +I++++++ + +G
Sbjct: 300 LGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRD--------IITFNSMMTGYIHSG 351
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
+ EAL LF M+ + ++ T+ LL+ CA AL GR +H + + + +I +
Sbjct: 352 QLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGT 411
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
LL+MYMKCG ++E +VF+++ K+D+ TW +MI+G NG+G+ AL F +M GF+P
Sbjct: 412 ALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQP 471
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
+ V+++AVL+ACSH+ L+NEGR FD M + I PQ+EHY CM+DLLGR+GLL EA D+
Sbjct: 472 NSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDL 531
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
VK MP++PNA +W ++L++CR+HK+ D+A+ A + L + G Y+ L NIY S +W
Sbjct: 532 VKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQW 591
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
E+A+K+R+ + + +KK AG S I V ++H F + + + +LEE++ ++++
Sbjct: 592 ENASKIRMLMEERQVKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSL 651
Query: 692 GCVP 695
G P
Sbjct: 652 GYSP 655
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/523 (34%), Positives = 311/523 (59%), Gaps = 13/523 (2%)
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
A+ G++ D+ LFD++ N +SWN M +G+ N D A +LF RM N ++W
Sbjct: 332 ARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR----NTISWA 387
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
+++ +AR GR E+ + + ++G+ ++ C+++ A GK +H +K
Sbjct: 388 GMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKA 447
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
G + +V NALI +YGK+ + + +F + K+ VS+N+ +++ + L DEA +VF
Sbjct: 448 GCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVF 507
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
+ +M P+V+SW+ +I A A +G EA+++FR M + + N ++ LL +
Sbjct: 508 N--------NMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGL 559
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
A +G++IH +++ M+ ++V N L++MY KC + VF+ +E++D+ TW
Sbjct: 560 SGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADSLK-VFDSMEERDIFTW 618
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
N++I+GY +GLG A+ ++ M+ AG P+ V FV +L ACSH+GLV+EG + F M
Sbjct: 619 NTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSS 678
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
++ + P +EHYACMVDLLGRAG +Q A + +MP+EP++ +W LL +C++HKN ++
Sbjct: 679 DYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGR 738
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI 661
A ++F + G+Y++LSNIY++ G W++ AKVR K +G+ K G SW+++K K+
Sbjct: 739 RAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKM 798
Query: 662 HMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
H F +G+ ++N+ L EL ++ G VPD D +L ++
Sbjct: 799 HSFVTGDEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDI 841
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 143/567 (25%), Positives = 246/567 (43%), Gaps = 72/567 (12%)
Query: 56 VTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYEN 115
V + ++ +AR+ + R GRL +AR VF++ PF + WNS++ +NG+ +
Sbjct: 27 VPRSPGTSAQSARIREL-GRLGRLHEAREVFDSMPF---RDIIAWNSMIFAYCNNGMPDA 82
Query: 116 ALKLYV-----KMRKLGVLGDGFTFPLVIRACK--FMG-SFRFRFSFGQIVHNHVLQMG- 166
L +R +L G+ +R + F G R ++ +V +V Q G
Sbjct: 83 GRSLADAISGGNLRTGTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYV-QNGD 141
Query: 167 -------FQG----NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
F +V N ++ Y M ++ LF+++ +N +SW +M SG+ L
Sbjct: 142 ITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLI 201
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE----VG 271
A ++F+ M EG+ P S+LS+ G+ + ++ K G E VG
Sbjct: 202 EQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVG 261
Query: 272 AEAIAVVLSVCADLAA-DHMGKVIHGFV-------------------IKGGFEDY----- 306
A++ D+ D K G I F Y
Sbjct: 262 T---AILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPL 318
Query: 307 --VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
V + +++ ++G + A+ LF +I E N+VSWNA+IT Y + + DEA ++F++
Sbjct: 319 KSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNR- 377
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
M N ISW+ +I +A NGR E+AL + + ++ + +++ C+
Sbjct: 378 -------MPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSN 430
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
AL G+++H V+ N V N L+ +Y K + +F+++ KD +++NS
Sbjct: 431 IEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSF 490
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
+S N L + A F M PD V++ ++SAC+ A NE IF M+ E R
Sbjct: 491 MSALVQNNLFDEARDVFNNMP----SPDVVSWTTIISACAQADQGNEAVEIFRSMLHE-R 545
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDI 571
P ++ L G G Q I
Sbjct: 546 ELPNPPILTILLGLSGNLGAPQLGQQI 572
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 122/510 (23%), Positives = 211/510 (41%), Gaps = 116/510 (22%)
Query: 81 DARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR 140
+A ++F PF +++ W ++ NG E AL + + G+L +
Sbjct: 370 EAEDLFNRMPF---RNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFF 426
Query: 141 ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
AC + + G+ VH+ ++ G Q N ++ N LI +Y K + ++FD++ VK
Sbjct: 427 ACSNIEAL----ETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVK 482
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
+ +S+N S N D A ++F M P+ V+WT+++S+ A+ + E +++F
Sbjct: 483 DTVSYNSFMSALVQNNLFDEARDVFNNMP----SPDVVSWTTIISACAQADQGNEAVEIF 538
Query: 261 -DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
M+ +R + + ++L + +L A +G+ IH IK G + + V NAL+ +Y K
Sbjct: 539 RSMLHERELP-NPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFK 597
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
+ +F +EE++I +WN +IT YA+ GL
Sbjct: 598 CSSAD-SLKVFDSMEERDIFTWNTIITGYAQHGL-------------------------- 630
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVV 439
G EA+ +++ M A V+ N VT GLL C+ S
Sbjct: 631 -------------GREAIRMYQLMVSAGVLPNEVTFVGLLHACSHS-------------- 663
Query: 440 RVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
G ++EGH F+ SM S YG+ L E+
Sbjct: 664 ---------------------GLVDEGHQFFK-----------SMSSDYGLTPLLEHYAC 691
Query: 500 TFEEMIEAG-------------FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
+ + AG +PD V + A+L AC V GRR + + F IE
Sbjct: 692 MVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKL---FSIE 748
Query: 547 PQ-MEHYACMVDLLGRAGLLQEASDIVKNM 575
P +Y + ++ G+ E + + K M
Sbjct: 749 PSNAGNYVMLSNIYSSQGMWDEVAKVRKLM 778
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 169/408 (41%), Gaps = 62/408 (15%)
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
++G++ ++ ++FD + ++ I+WN M + N D L + N T T
Sbjct: 44 GRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAIS----GGNLRTGT 99
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
LLS +AR GR+ + +FD M R
Sbjct: 100 ILLSGYARAGRVRDARRVFDGMGVRN---------------------------------- 125
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
NA++ Y ++GD+ +A+ LF + +++ SWN ++T Y + L +EA +F
Sbjct: 126 -----TVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLF 180
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
++ + +G +SW+ +I + + A D+FR M + + +LS
Sbjct: 181 ERMPERNG--------VSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSA 232
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK-CGCLEEGHLVFEQIEKKDLIT 480
I IH V + ++++V +LN Y K L+ FE + ++ T
Sbjct: 233 VRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYT 292
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
W+++I+ G ++A A ++ + ++L+ + G +++ + +FD +
Sbjct: 293 WSTIIAALSQAGRIDDAFAVYQRDPLKSVP----SRTSMLTGLARYGRIDDAKILFDQIH 348
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
EP + + M+ + ++ EA D+ MP N W ++
Sbjct: 349 -----EPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFR-NTISWAGMI 390
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/634 (32%), Positives = 355/634 (55%), Gaps = 51/634 (8%)
Query: 62 SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYV 121
+ F +L+ YA+ + A +FE+ P + + WN ++ +G AL + V
Sbjct: 227 TVFCRNSMLAGYAKSYGVDHALELFESMP---ERDVVSWNMMVSALSQSGRAREALSVAV 283
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
M GV D T+ + AC + S +G+ +H V++ + ++ + ++ +Y
Sbjct: 284 DMHNRGVRLDSTTYTSSLTACAKLSSL----GWGKQLHAQVIRSLPCIDPYVASAMVELY 339
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
AK G ++ ++F +R +N +S WT
Sbjct: 340 AKCGCFKEARRVFSSLRDRNTVS-----------------------------------WT 364
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
L+ + G E+++LF+ MR + V A+A ++S C++ + + +H +K
Sbjct: 365 VLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKS 424
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
G V + N+LI +Y K G+++ A+++FS +EE++IVSW ++T+Y++ G +A E F
Sbjct: 425 GHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFF 484
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK-VVANSVTISGLLS 420
DG M NVI+W+A++GA+ +G E+ L ++ M K V+ + VT L
Sbjct: 485 ------DG--MSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFR 536
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
CA+ A +G +I GH V+V + + V N ++ MY KCG + E +F+ + +KDL++
Sbjct: 537 GCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVS 596
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WN+MI+GY +G+G+ A+ F++M++ G KPD +++VAVLS+CSH+GLV EG+ FDM+
Sbjct: 597 WNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLK 656
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
R+ + P +EH++CMVDLL RAG L EA +++ MPM+P A VWG LL++C+ H N ++A
Sbjct: 657 RDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELA 716
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
E A +F L + +G YMLL+ IYA +G+ D+A+VR + KG+KK G SW+EVK K
Sbjct: 717 ELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNK 776
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
+H+F + + + + E L+EL ++ G V
Sbjct: 777 VHVFKAEDVSHPQVIAIREKLDELMEKIAQLGYV 810
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 129/590 (21%), Positives = 251/590 (42%), Gaps = 126/590 (21%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG-VLGD 131
YA+ G L DA +F P + WN+++ +G + +A++ +V MR+ G L +
Sbjct: 105 YAKLGSLSDAEELFGRMP---RRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPN 161
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
FTF +++C +G + + + GFQG+ + ++ M+ + G + +
Sbjct: 162 AFTFGCAMKSCGALGWHEVALQLLGL----LTKFGFQGDPDVATGIVDMFVRCGAVDFAS 217
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
K F ++ N M +G+A ++ D ALELF+ M E + V+W ++S+ ++ G
Sbjct: 218 KQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMP----ERDVVSWNMMVSALSQSG 273
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
R E + + M RG+ + + L+ CA L++ GK +H VI+ +V +
Sbjct: 274 RAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVAS 333
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
A++ +Y K G K A+ +FS + ++N VSW LI + + G E++E+F+Q
Sbjct: 334 AMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQ-------- 385
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
M+ + + ++ ++S C+ + +
Sbjct: 386 -------------------------------MRAELMTVDQFALATIISGCSNRMDMCLA 414
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL------------- 478
R++H ++ + +++ N L++MY KCG L+ +F +E++D+
Sbjct: 415 RQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQV 474
Query: 479 ------------------ITWNSMISGYGMNGLGENALATFEEMI-EAGFKPDGVAFVAV 519
ITWN+M+ Y +G E+ L + M+ E PD V +V +
Sbjct: 475 GNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTL 534
Query: 520 LSAC-----------------------------------SHAGLVNEGRRIFDMMVREFR 544
C S G ++E R+IFD + R+
Sbjct: 535 FRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRK-- 592
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNM---PMEPNAYVWGTLLNSC 591
+ + M+ + G+ ++A +I +M +P+ + +L+SC
Sbjct: 593 ---DLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSC 639
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 216/482 (44%), Gaps = 21/482 (4%)
Query: 159 HNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF-DKVRVKNYISWNMMFSGFALNFD 217
H ++ +G V + N L+ Y G + D+ L + N I+ N+M +G+A
Sbjct: 51 HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV-GAEAIA 276
A ELF RM + +W +L+S + + GR + M+ F MR+ G + A
Sbjct: 111 LSDAEELFGRMP----RRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFG 166
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
+ C L + + G + K GF+ V ++ ++ + G V A FS+IE
Sbjct: 167 CAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERP 226
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
+ N+++ YA++ D A+E+F SM +V+SW+ ++ A + +GR EA
Sbjct: 227 TVFCRNSMLAGYAKSYGVDHALELFE--------SMPERDVVSWNMMVSALSQSGRAREA 278
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
L + M V +S T + L+ CA+ ++L G+++H V+R + V + ++ +
Sbjct: 279 LSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVEL 338
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCGC +E VF + ++ ++W +I G+ G +L F +M D A
Sbjct: 339 YAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFAL 398
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
++S CS+ + R++ + ++ + + ++ + + G LQ A I +M
Sbjct: 399 ATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNS-LISMYAKCGNLQNAESIFSSME 457
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF-GLITETTGSYMLLSNIYAASGRWEDAA 635
E + W +L + N A + F G+ T ++ + Y G ED
Sbjct: 458 -ERDIVSWTGMLTAYSQVGNI----GKAREFFDGMSTRNVITWNAMLGAYIQHGAEEDGL 512
Query: 636 KV 637
K+
Sbjct: 513 KM 514
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 185/373 (49%), Gaps = 21/373 (5%)
Query: 25 TYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
TY +SL C + ++ KQ+H Q+I + ++A+ ++ +YA+ G +AR
Sbjct: 296 TYTSSLTAC-----AKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARR 350
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
VF + +++ W ++ + G + +L+L+ +MR + D F +I C
Sbjct: 351 VFSSLR---DRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGC-- 405
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
S R + +H+ L+ G V I N LI MYAK G + ++ +F + ++ +S
Sbjct: 406 --SNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSMEERDIVS 463
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MM 263
W M + ++ + A E F M N +TW ++L ++ + G E+ + ++ M+
Sbjct: 464 WTGMLTAYSQVGNIGKAREFFDGMSTR----NVITWNAMLGAYIQHGAEEDGLKMYSAML 519
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
++ + + CAD+ A+ +G I G +K G V NA+I +Y K G +
Sbjct: 520 TEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRI 579
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
A+ +F + K++VSWNA+IT Y++ G+ +A+E+F + K +P+ IS+ AV
Sbjct: 580 SEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGA----KPDYISYVAV 635
Query: 384 IGAFASNGRGEEA 396
+ + + +G +E
Sbjct: 636 LSSCSHSGLVQEG 648
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 156/351 (44%), Gaps = 47/351 (13%)
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF-S 331
+A+A L C A + +HG ++ G VF++N L+ Y G + A+ L
Sbjct: 29 QALADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRG 88
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+I E N+++ N ++ YA+ G +A E+F G M R +V SW+ ++ + +G
Sbjct: 89 DITEPNVITHNIMMNGYAKLGSLSDAEELF--------GRMPRRDVTSWNTLMSGYYQSG 140
Query: 392 RGEEALDLFRKMQLA-KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
R +A++ F M+ + + N+ T + C + ++ G + + + V
Sbjct: 141 RFLDAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVA 200
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEK-------------------------------KDLI 479
G+++M+++CG ++ F QIE+ +D++
Sbjct: 201 TGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVV 260
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN M+S +G AL+ +M G + D + + L+AC+ + G+++ +
Sbjct: 261 SWNMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQV 320
Query: 540 VREFRIEPQMEHY--ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+R P ++ Y + MV+L + G +EA + ++ + N W L+
Sbjct: 321 IRSL---PCIDPYVASAMVELYAKCGCFKEARRVFSSL-RDRNTVSWTVLI 367
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 107/248 (43%), Gaps = 42/248 (16%)
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEE---------------------------GH 467
HG +V V + + +QN LL+ Y+ CG L + G
Sbjct: 51 HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110
Query: 468 L-----VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK-PDGVAFVAVLS 521
L +F ++ ++D+ +WN+++SGY +G +A+ +F M +G P+ F +
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMK 170
Query: 522 ACSHAGLVNEGRRIFDMMVR-EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
+C G ++ ++ + F+ +P + +VD+ R G + AS + P
Sbjct: 171 SCGALGWHEVALQLLGLLTKFGFQGDPDVA--TGIVDMFVRCGAVDFASKQFSQIE-RPT 227
Query: 581 AYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE-TTGSYMLLSNIYAASGRWEDAAKVRI 639
+ ++L K+ V A+ ++F + E S+ ++ + + SGR +A V +
Sbjct: 228 VFCRNSMLAG--YAKSYGVDHAL--ELFESMPERDVVSWNMMVSALSQSGRAREALSVAV 283
Query: 640 SAKTKGLK 647
+G++
Sbjct: 284 DMHNRGVR 291
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 228/682 (33%), Positives = 365/682 (53%), Gaps = 55/682 (8%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C I + VH + +G + F+ ++S+Y R G +AR VF+
Sbjct: 148 FPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMR 207
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK-LGVLGDGFTFPLVIRACKFMGSFR 149
+ WNSI+ + G A+K++ +M + LG+ D + V+ AC +G++
Sbjct: 208 ERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAW- 266
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
S G+ VH + L+ G +V + N ++ MYAK G M ++ K+F++++VK+ +SWN M
Sbjct: 267 ---SRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMV 323
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+G++ D AL LF+++ E +E N VTW+++++ +A+ G E +D+F M G E
Sbjct: 324 TGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSE 383
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE-------DYVFVKNALICVYGKHGD 322
+ +LS CA GK H IK D + V NALI +Y K
Sbjct: 384 PNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKS 443
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
K A+ +F I K+ +V++W+
Sbjct: 444 PKAARAMFDLIPPKD-------------------------------------RSVVTWTV 466
Query: 383 VIGAFASNGRGEEALDLFRKMQLAK--VVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+IG A +G EAL+LF +M V+ N+ TIS L CA AL GR+IH +V+R
Sbjct: 467 LIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLR 526
Query: 441 VSMNKNIL-VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
+L V N L++MY K G ++ +VF+ + +++ ++W S+++GYGM+G GE AL
Sbjct: 527 NRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQ 586
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
F EM + PDGV FV VL ACSH+G+V++G F+ M ++F + P EHYACMVDLL
Sbjct: 587 IFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLL 646
Query: 560 GRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYM 619
RAG L EA ++++ MPM+P VW LL++CR++ N ++ E A+Q+ L + GSY
Sbjct: 647 SRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYT 706
Query: 620 LLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCE 679
LLSNIYA + W+D A++R K G+KK G SW++ ++ F +G+ + + +
Sbjct: 707 LLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYD 766
Query: 680 VLEELALQMENKGCVPDNDIIL 701
+L +L +++ G VPDN L
Sbjct: 767 LLRDLMQRIKALGYVPDNRFAL 788
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 188/612 (30%), Positives = 301/612 (49%), Gaps = 72/612 (11%)
Query: 17 PSRPFSIITY-----NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLS 71
P P +T +S D L QCK++ + H QL+V G ++S
Sbjct: 29 PKPPLLFLTTFFFSTASSTTDLTSTLFHQCKSLASAELTHQQLLVQGLPHDP---THIIS 85
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+Y F A +V + WN ++R +V G E+ L+LY +M++LG D
Sbjct: 86 MYLTFNSPAKALSVLRRL-HPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPD 144
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
+TFP V++AC + SFR G VH V GF+ NV + N L+ MY + G ++
Sbjct: 145 HYTFPFVLKACGEIPSFR----CGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 200
Query: 192 KLFDKVR---VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
++FD++R V + +SWN + + + D A+++F+RM
Sbjct: 201 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERM-------------------- 240
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
T DL GI A ++ VL CA + A GK +HG+ ++ G + VF
Sbjct: 241 -------TEDL-------GIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 286
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V NA++ +Y K G ++ A +F ++ K++VSWNA++T Y++ G D+A+ +F EK+
Sbjct: 287 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLF---EKIR 343
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
+E NV++WSAVI +A G G EALD+FR+M L N VT+ LLS CA + L
Sbjct: 344 EEKIEL-NVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTL 402
Query: 429 NIGREIHGHVVRVSMN-------KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD--LI 479
G+E H H ++ +N +++V N L++MY KC + +F+ I KD ++
Sbjct: 403 LHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVV 462
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAG--FKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
TW +I G +G AL F +M++ P+ L AC+ G + GR+I
Sbjct: 463 TWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHA 522
Query: 538 MMVREFRIEPQMEHYA-CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
++R R E M A C++D+ ++G + A + NM + N W +L+ MH
Sbjct: 523 YVLRN-RFESAMLFVANCLIDMYSKSGDVDAARVVFDNM-HQRNGVSWTSLMTGYGMHGR 580
Query: 597 TDVAEAMASQIF 608
+ EA+ QIF
Sbjct: 581 GE--EAL--QIF 588
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/654 (31%), Positives = 353/654 (53%), Gaps = 23/654 (3%)
Query: 59 ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
A+ A +++ YA GRL A + F+ P + ++L N+++ A+
Sbjct: 84 ADPCPVAATSLVAAYAAAGRLPAAVSFFDAVP-QARRDTVLHNAVISAYARASHAAPAVA 142
Query: 119 LYVKMRKLGVL-GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNEL 177
++ + G L D ++F ++ A + + R + VL+ G G + + N L
Sbjct: 143 VFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHC--AQLQCSVLKSGAGGVLSVSNAL 200
Query: 178 IGMYAK---MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
+ +Y K + D+ K+ D++ K+ ++W M G+ D A +F+ ++++
Sbjct: 201 VALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVK--- 257
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
V W +++S + G + E +LF M + + VLS CA+ GK +
Sbjct: 258 -FDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSV 316
Query: 295 HGFV--IKGGF--EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
HG + ++ F E + V NAL+ +Y K G++ VA+ +F ++ K++VSWN +++ Y E
Sbjct: 317 HGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVE 376
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
+ D+AVEVF + M N +SW ++ + G E+AL LF +M+ V
Sbjct: 377 SSCLDKAVEVFEE--------MPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKP 428
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
T +G +S C E +L G+++HGH+V++ + N L+ MY +CG ++E +L+F
Sbjct: 429 CDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMF 488
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
+ D ++WN+MIS G +G G AL F+ M+ G PD ++F+ VL+AC+H+GLV+
Sbjct: 489 LVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVD 548
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
EG + F+ M R+F I P +HY ++DLLGRAG + EA D++K MP EP +W +L+
Sbjct: 549 EGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSG 608
Query: 591 CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVA 650
CR + ++ A Q+F + + G+Y+LLSN Y+A+GRW DAA+VR + +G+KK
Sbjct: 609 CRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEP 668
Query: 651 GQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G SWIE K+H+F G++ + V + LE + +M G VPD ++L +M
Sbjct: 669 GCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVGARMRKLGYVPDTKVVLHDM 722
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 185/404 (45%), Gaps = 64/404 (15%)
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV- 270
+ L+ D A LF+ +P V TSL++++A GRL + FD + + +
Sbjct: 69 YTLSGDLPAAATLFR------ADPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTV 122
Query: 271 --------------GAEAIAVVLSVCAD--------------LAADHMGKV-------IH 295
A A+AV S+ A AA H+ + +
Sbjct: 123 LHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQLQ 182
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKV---AQNLFSEIEEKNIVSWNALITSYAEAG 352
V+K G + V NAL+ +Y K ++ A+ + E+ +K+ ++W ++ Y G
Sbjct: 183 CSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRG 242
Query: 353 LCDEAVEVFSQLE-KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVAN 411
A VF +++ K D + W+A+I + +G EA +LFR+M L +V +
Sbjct: 243 DVGAARSVFEEVDVKFD---------VVWNAMISGYVHSGMVVEAFELFRRMVLERVPLD 293
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMN----KNILVQNGLLNMYMKCGCLEEGH 467
T + +LS CA + G+ +HG + R+ N + V N L+ +Y KCG +
Sbjct: 294 EFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVAR 353
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
+F+ ++ KD+++WN+++SGY + + A+ FEEM +K + ++++ ++S H G
Sbjct: 354 RIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEM---PYK-NELSWMVMVSGYVHGG 409
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
+ ++F+ M R ++P YA + G G L+ +
Sbjct: 410 FSEDALKLFNRM-RAEDVKPCDYTYAGAISACGELGSLKHGKQL 452
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 16/227 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H L+ G S ++++YAR G + +A +F P S+ WN+++
Sbjct: 450 KQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMP---NIDSVSWNAMISAL 506
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+G AL+L+ +M G+ D +F V+ AC G F + + + +
Sbjct: 507 GQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPG 566
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD----GALE 223
+ + + +L+G ++G+ D K + W + SG + D + A +
Sbjct: 567 EDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSI--WEAILSGCRTSGDMELGAHAADQ 624
Query: 224 LFKRMELEGLEPNFV-TWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
LFK + P T+ L ++++ GR + + +MR RG++
Sbjct: 625 LFK------MTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVK 665
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 232/676 (34%), Positives = 364/676 (53%), Gaps = 46/676 (6%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F + + C I ++ H VTG ++ F+ ++++Y+R G L DAR VF+ P
Sbjct: 130 FPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMP 189
Query: 91 -FDCKSSSLLWNSILRVNVSNGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACKFMGSF 148
+D S WNSI+ G + AL+++ KM + G D T V+ C +G+
Sbjct: 190 VWDVVS----WNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTR 245
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
S G+ H + N+ + N L+ MYAK G M ++ +F + VK+ +SWN M
Sbjct: 246 ----SLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAM 301
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+G++ + A+ LF++M+ E ++ + VTW++ +S +A+ G E + + M GI
Sbjct: 302 VAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
+ + VLS CA + A GK IH + IK + KN HGD
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMD---LRKNG-------HGD------ 405
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+N+V N LI YA+ D A +F L S + +V++W+ +IG ++
Sbjct: 406 -------ENMVI-NQLIDMYAKCKKVDIARAMFDSL------SPKERDVVTWTVMIGGYS 451
Query: 389 SNGRGEEALDLFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK- 445
+G +AL+L +M + + N+ TIS L CA AAL+IG++IH + +R N
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAV 511
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
+ V N L++MY KCG + + LVF+ + +K+ +TW S+++GYGM+G GE AL FEEM
Sbjct: 512 PLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMR 571
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
GFK DGV + VL ACSH+G++++G F+ M +F + P EHYAC+VDLLGRAG L
Sbjct: 572 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRL 631
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
A +++ MPMEP VW LL+ CR+H ++ E A +I L + GSY LLSN+Y
Sbjct: 632 NAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMY 691
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A +GRW+D ++R + KG+KK G SW+E + F G+ K + +VL +
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHM 751
Query: 686 LQMENKGCVPDNDIIL 701
++++ G VP+ L
Sbjct: 752 QRIKDIGYVPETGFAL 767
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 168/581 (28%), Positives = 276/581 (47%), Gaps = 58/581 (9%)
Query: 26 YNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNV 85
++ S L+ + +CKTI Q+K +H +L+ G + L + ++S Y G L A ++
Sbjct: 23 FSTSALEITPPFIHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISLGCLSHAVSL 81
Query: 86 FETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
P + WNS++R +NG L + M L D +TFP V +AC +
Sbjct: 82 LRRFP-PSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEI 140
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
S R G H GF NV + N L+ MY++ G +SD+ K+FD++ V + +SW
Sbjct: 141 SSVR----CGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSW 196
Query: 206 NMMFSGFALNFDCDGALELFKRMELE-GLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
N + +A ALE+F +M E G P+ +T
Sbjct: 197 NSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDIT------------------------- 231
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
+ VL CA + +GK HGF + +FV N L+ +Y K G +
Sbjct: 232 ----------LVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMD 281
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A +FS + K++VSWNA++ Y++ G ++AV +F Q+++ + +V++WSA I
Sbjct: 282 EANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQE----EKIKMDVVTWSAAI 337
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
+A G G EAL + R+M + + N VT+ +LS CA AL G+EIH + ++ M+
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMD 397
Query: 445 --KN-----ILVQNGLLNMYMKCGCLEEGHLVFEQIEKK--DLITWNSMISGYGMNGLGE 495
KN +V N L++MY KC ++ +F+ + K D++TW MI GY +G
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 496 NALATFEEMIE--AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
AL EM E +P+ L AC+ ++ G++I +R + +
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVSN 517
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
C++D+ + G + +A + NM ME N W +L+ MH
Sbjct: 518 CLIDMYAKCGDIGDARLVFDNM-MEKNEVTWTSLMTGYGMH 557
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 172/411 (41%), Gaps = 80/411 (19%)
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
W SL+ S+ GR + + F +M V C ++++ G H
Sbjct: 95 WNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSR 154
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
GF VFV NAL+ +Y + G + A+ +F E+ ++VSWN++I SYA+ G A+E
Sbjct: 155 VTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALE 214
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
+FS++ G FR + +T+ +L
Sbjct: 215 MFSKMTNEFG------------------------------FR--------PDDITLVNVL 236
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
CA ++G++ HG V M +N+ V N L++MY K G ++E + VF + KD++
Sbjct: 237 PPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVKDVV 296
Query: 480 TWNSM-----------------------------------ISGYGMNGLGENALATFEEM 504
+WN+M ISGY GLG AL +M
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRI------FDMMVREFRIEPQMEHYACMVDL 558
+ +G KP+ V ++VLS C+ G + G+ I + M +R+ + ++D+
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDM 416
Query: 559 LGRAGLLQEASDIVKNM-PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
+ + A + ++ P E + W ++ H + + A + S++F
Sbjct: 417 YAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMF 467
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 215/648 (33%), Positives = 348/648 (53%), Gaps = 25/648 (3%)
Query: 66 AARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
A +++ A GRL DA F+ P + ++L N+++ L A+ ++ +
Sbjct: 95 ATSLVAAQAAAGRLRDAAAFFDAVP-PARRDTVLHNAMMSAFARASLAAPAVSVFHALLG 153
Query: 126 LGVL-GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
G L D ++F +I A M + +H VL+ G + + N LI +Y K
Sbjct: 154 SGSLRPDDYSFTALISAVGQMHNLAAPHC--TQLHCSVLKSGAAAVLSVSNALIALYMKC 211
Query: 185 GQMS---DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNF-VTW 240
D+ K+ D++ K+ ++W M G+ D + A +F+ E++G F V W
Sbjct: 212 DTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFE--EVDG---KFDVVW 266
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
+++S + + G + +LF M + + VLS CA+ GK +HG +I+
Sbjct: 267 NAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIR 326
Query: 301 --GGF--EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
F E + V NAL+ +Y K G + +A+ +F + K++VSWN +++ Y ++G D+
Sbjct: 327 LQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDK 386
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
AVEVF M N +SW ++ + G E+AL LF +M+ V T +
Sbjct: 387 AVEVFK--------VMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYA 438
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
G ++ C E AL GR++H H+V+ + N LL MY KCG + + LVF +
Sbjct: 439 GAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNL 498
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D ++WN+MIS G +G G AL F++M+ G PD ++F+ +L+AC+HAGLV+EG F
Sbjct: 499 DSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYF 558
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
+ M R+F I P +HYA ++DLLGR+G + EA D++K MP EP +W +L+ CR + +
Sbjct: 559 ESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGD 618
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
+ A Q+F +I + G+Y+LLSN Y+A+GRW DAA+VR + +G+KK G SWIE
Sbjct: 619 MEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIE 678
Query: 657 VKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
V KIH+F G++ + + V + LE + +M G VPD +L +M
Sbjct: 679 VGSKIHVFLVGDTKHPEAQEVYQFLEVIGARMRKLGYVPDTKFVLHDM 726
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 18/228 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+Q+H L+ G AS +L++YA+ G + DAR VF P S+ WN+++
Sbjct: 454 RQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP---NLDSVSWNAMISAL 510
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+G AL+L+ +M G+ D +F ++ AC G F + + + G
Sbjct: 511 GQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKR---DFGI 567
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMMFSGFALNFDCD----GAL 222
LI + + G++ ++ L + + S W + SG N D + A
Sbjct: 568 SPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAAD 627
Query: 223 ELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+LF+ + + +G T+ L ++++ GR + + +MR RG++
Sbjct: 628 QLFRMIPQHDG------TYILLSNTYSAAGRWVDAARVRKLMRDRGVK 669
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/583 (35%), Positives = 325/583 (55%), Gaps = 18/583 (3%)
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
S G AL ++ + G+ F ++R C F+ G+ VH H+ GF+
Sbjct: 39 SQGRLPEALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKG----GKCVHLHLKHTGFK 94
Query: 169 GNVHIV-NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
IV N LIGMY + G+ ++ K+FDK+ V+N SWN M +G+A D + A +LF R
Sbjct: 95 RPTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDR 154
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M +E + V+W +++ ++A+ G E + L+ R+ + A + A VL +C L
Sbjct: 155 M----MEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKE 210
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+ K +HG V+ GF + + ++++ Y K G+++ A+ LF E+ K+I +W +++
Sbjct: 211 LQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIVSG 270
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
YA+ G + A E+F Q M N +SWSA+I +A N G EALD F KM
Sbjct: 271 YAKWGDMNSASELFHQ--------MPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFG 322
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
+ T S L CA AAL G+++HG+++R N +V + L++MY KCG LE
Sbjct: 323 INPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASC 382
Query: 468 LVFEQI-EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
VF + K+D++ WN+MIS NG GE A+ F +M+E+G KPD + F+ +LSACSH+
Sbjct: 383 CVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHS 442
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GLV EG R F M + + P EHYAC++DLLGRAG E + ++NM +P+ VW
Sbjct: 443 GLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSA 502
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL CR+H N ++ +A ++ L +++ +Y+ L+++YA G+WE KVR K +
Sbjct: 503 LLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFI 562
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
+K G SWI+V K H F + + L + + +LE+LA E
Sbjct: 563 RKERGISWIDVGNKTHSFIASDRLHPLKEEIYLLLEQLARHTE 605
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 178/336 (52%), Gaps = 16/336 (4%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+L+ YA+ G + +AR +F+ + + WN+I+ G + A+ LY R+L +
Sbjct: 135 MLAGYAKLGDVNNARKLFDRM---MEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDM 191
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ F+F V+ C + + + VH VL GF N+ + + ++ Y+K G+M
Sbjct: 192 GFNAFSFAGVLILCVKLKELQ----LAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMR 247
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ LFD++ VK+ +W + SG+A D + A ELF +M E N V+W++L+S +A
Sbjct: 248 CARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMP----EKNPVSWSALISGYA 303
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
R E +D F M K GI + L CA +AA GK +HG++I+ F
Sbjct: 304 RNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTI 363
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEK-NIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
V ++LI +Y K G ++ + +F + K ++V WN +I++ A+ G ++A+++F+ + +
Sbjct: 364 VVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVE- 422
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
S +P+ I++ ++ A + +G +E L F+ M
Sbjct: 423 ---SGLKPDRITFIVILSACSHSGLVQEGLRFFKAM 455
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 120/251 (47%), Gaps = 33/251 (13%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPF---------- 91
K + KQVH Q++V G ++ L++ ++ Y++ G + AR +F+
Sbjct: 209 KELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKDIHAWTTIV 268
Query: 92 -------DCKSSSLL-----------WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
D S+S L W++++ N L AL + KM K G+ + +
Sbjct: 269 SGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQY 328
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
TF + AC + + + G+ VH ++++ F+ N +V+ LI MY+K G + S +
Sbjct: 329 TFSSCLCACASIAALK----HGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCV 384
Query: 194 FDKVRVK-NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
F + K + + WN M S A N + A+++F M GL+P+ +T+ +LS+ + G
Sbjct: 385 FHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGL 444
Query: 253 LEETMDLFDMM 263
++E + F M
Sbjct: 445 VQEGLRFFKAM 455
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK- 445
+S GR EAL ++ + + LL +CA++ G+ +H H+ +
Sbjct: 37 LSSQGRLPEALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRP 96
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
+V N L+ MY +CG E VF+++ ++L +WN M++GY G NA F+ M+
Sbjct: 97 TTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMM 156
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
E D V++ ++ A + G NE ++ R+FR
Sbjct: 157 E----KDVVSWNTIVLAYAKQGCFNEAIGLY----RDFR 187
Score = 47.0 bits (110), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L C +I LK QVH LI T + + + ++ +Y++ G L + VF
Sbjct: 330 FSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHL-- 387
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR- 149
K ++WN+++ NG E A++++ M + G+ D TF +++ AC G +
Sbjct: 388 MGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQE 447
Query: 150 -FRFSFGQIVHNH 161
RF F + ++H
Sbjct: 448 GLRF-FKAMTYDH 459
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/583 (35%), Positives = 325/583 (55%), Gaps = 18/583 (3%)
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
S G AL ++ + GV F ++R C F+ G+ VH H+ GF+
Sbjct: 39 SQGRLPEALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKG----GKCVHLHLKHTGFK 94
Query: 169 GNVHIV-NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
IV N LIGMY + G+ ++ K+FDK+ V+N SWN M +G+A D + A +LF R
Sbjct: 95 RPTTIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDR 154
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M +E + V+W +++ ++A+ G E + L+ R+ + A + A VL +C L
Sbjct: 155 M----MEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKE 210
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+ K +HG V+ GF + + ++++ Y K G+++ A+ LF E+ K+I +W +++
Sbjct: 211 LQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIVSG 270
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
YA+ G + A E+F Q M N +SWSA+I +A N G EALD F KM
Sbjct: 271 YAKWGDMNSASELFHQ--------MPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFG 322
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
+ T S L CA AAL G+++HG+++R N +V + L++MY KCG LE
Sbjct: 323 INPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASC 382
Query: 468 LVFEQI-EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
VF + K+D++ WN+MIS NG GE A+ F +M+E+G KPD + F+ +LSACSH+
Sbjct: 383 CVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHS 442
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GLV EG R F M + + P EHY+C++DLLGRAG E + ++NM +P+ VW
Sbjct: 443 GLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSA 502
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL CR+H N ++ +A ++ L +++ +Y+ L+++YA G+WE KVR K +
Sbjct: 503 LLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFI 562
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
+K G SWI+V K H F + + L + + +LE+LA E
Sbjct: 563 RKERGISWIDVGNKTHSFIASDRLHPLKEEIYLLLEQLARHTE 605
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 178/336 (52%), Gaps = 16/336 (4%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+L+ YA+ G + +AR +F+ + + WN+I+ G + A+ LY R+L +
Sbjct: 135 MLAGYAKLGDVNNARKLFDRM---MEKDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDM 191
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ F+F V+ C + + + VH VL GF N+ + + ++ YAK G+M
Sbjct: 192 GFNAFSFAGVLILCVKLKELQ----LAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMR 247
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ LFD++ VK+ +W + SG+A D + A ELF +M E N V+W++L+S +A
Sbjct: 248 CARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMP----EKNPVSWSALISGYA 303
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
R E +D F M K GI + L CA +AA GK +HG++I+ F
Sbjct: 304 RNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTI 363
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEK-NIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
V ++LI +Y K G ++ + +F + K ++V WN +I++ A+ G ++A+++F+ + +
Sbjct: 364 VVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVE- 422
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
S +P+ I++ ++ A + +G +E L F+ M
Sbjct: 423 ---SGLKPDRITFIVILSACSHSGLVQEGLRFFKAM 455
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 33/251 (13%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPF---------- 91
K + KQVH Q++V G ++ L++ ++ YA+ G + AR +F+
Sbjct: 209 KELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKDIHAWTTIV 268
Query: 92 -------DCKSSSLL-----------WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
D S+S L W++++ N L AL + KM K G+ + +
Sbjct: 269 SGYAKWGDMNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQY 328
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
TF + AC + + + G+ VH ++++ F+ N +V+ LI MY+K G + S +
Sbjct: 329 TFSSCLCACASIAALK----HGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCV 384
Query: 194 FDKVRVK-NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
F + K + + WN M S A N + A+++F M GL+P+ +T+ +LS+ + G
Sbjct: 385 FHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGL 444
Query: 253 LEETMDLFDMM 263
++E + F M
Sbjct: 445 VQEGLRFFKAM 455
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 11/189 (5%)
Query: 359 EVFSQLEKLDGGSMERPNVISW--SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
+ F S +RP+ S + + +S GR EAL ++ V +
Sbjct: 7 QAFKTPASFGPKSKQRPDSTSLCIAQSLLDLSSQGRLPEALSYLDRLAQRGVRLPTGIFV 66
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNK-NILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
LL +CA++ G+ +H H+ + +V N L+ MY +CG E VF+++
Sbjct: 67 DLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKMSV 126
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
++L +WN M++GY G NA F+ M+E D V++ ++ A + G NE +
Sbjct: 127 RNLYSWNHMLAGYAKLGDVNNARKLFDRMME----KDVVSWNTIVLAYAKQGCFNEAIGL 182
Query: 536 FDMMVREFR 544
+ R+FR
Sbjct: 183 Y----RDFR 187
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L C +I LK QVH LI T + + + ++ +Y++ G L + VF
Sbjct: 330 FSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHL-- 387
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR- 149
K ++WN+++ NG E A++++ M + G+ D TF +++ AC G +
Sbjct: 388 MGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQE 447
Query: 150 -FRFSFGQIVHNH 161
RF F + ++H
Sbjct: 448 GLRF-FKAMTYDH 459
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 223/675 (33%), Positives = 370/675 (54%), Gaps = 59/675 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLS---IYARFGRLFDARNVFETAPFDC 93
LL CKT+ L+ +H Q+I TG + + + +R+L + F L A +VFET
Sbjct: 8 LLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQ--- 64
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + L+WN++ R + + +A+KLYV M LG+L + +TFP ++++C + + S
Sbjct: 65 EPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCA-----KLKVS 119
Query: 154 F-GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
GQ +H HVL++G++ ++++ LI MY K G+ D+ K+FD ++ +S+ + +G+
Sbjct: 120 KEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGY 179
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
A + A ++F + ++ + V+W +++S +A G +E +DLF M K ++
Sbjct: 180 ASRGYIESAQKMFDEIPVK----DVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDE 235
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ V+S CA + +G+ +H ++ HG + NL
Sbjct: 236 STMVTVVSACAQSGSIQLGRQVHSWI-------------------DDHG---LGSNL--- 270
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
IV NALI Y++ G + A +F L D VISW+ +IG +
Sbjct: 271 ----KIV--NALIDLYSKCGEVETACGLFQGLSNKD--------VISWNTMIGGYTHLNL 316
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHV---VRVSMNKNILV 449
+EAL LF++M + N VT+ +L CA+ A++ GR IH ++ ++ N + L
Sbjct: 317 YKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSL- 375
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
+ L++MY KCG +E H VF + + L N+MI G+ M+G A F M + G
Sbjct: 376 RTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGI 435
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
+PD + FV +LSACSH+G+++ GRRIF M + ++I P++EHY CM+DLLG GL +EA
Sbjct: 436 EPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAE 495
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASG 629
+++ M MEP+ +W +LL +C+MH N ++ E+ A ++ + E GSY+LLSNIYA +G
Sbjct: 496 EMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAG 555
Query: 630 RWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
RW + A +R KG+KKV G S IE+ +H F G+ + + +LEE+ + +E
Sbjct: 556 RWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLE 615
Query: 690 NKGCVPDNDIILWEM 704
G VPD +L EM
Sbjct: 616 EAGFVPDTSEVLQEM 630
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 222/710 (31%), Positives = 366/710 (51%), Gaps = 65/710 (9%)
Query: 4 SLLHQP--HQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANA 61
S L P H S+P P+ ++ + L +LL +C I LKQ+H+ +I +G +
Sbjct: 3 SCLSPPFVHFLPSSDP--PYKLLENHPHL-----NLLAKCPDIPSLKQIHSLIIKSGLHN 55
Query: 62 SAFLAARVLSIYARFGR--LFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKL 119
+ F ++++ A L A ++F + + +WN+++R + ++L L
Sbjct: 56 TLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQ-PPNIFIWNTLIRAHSLTPTPTSSLHL 114
Query: 120 YVKMRKLGVLGDGFTFPLVIRAC-KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
+ +M G+ + TFP + ++C K + + +H H L++ + H+ LI
Sbjct: 115 FSQMLHSGLYPNSHTFPSLFKSCAKSKATHE-----AKQLHAHALKLALHLHPHVHTSLI 169
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
MY+++G++ + +FDK +++ +S+ + +G+ D A LF + + + V
Sbjct: 170 HMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAK----DVV 225
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
+W ++++ + + GR EE + F M++ + + VLS C L + +GK I +V
Sbjct: 226 SWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWV 285
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
GF KN+ NAL+ Y++ G A
Sbjct: 286 RDRGFG-------------------------------KNLQLVNALVDMYSKCGEIGTAR 314
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
++F DG ME +VI W+ +IG + EEAL LF M V N VT +
Sbjct: 315 KLF------DG--MEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAV 366
Query: 419 LSVCAESAALNIGREIHGHVVR----VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
L CA AL++G+ +H ++ + N+ + ++ MY KCGC+E VF +
Sbjct: 367 LPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMG 426
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
+ L +WN+MISG MNG E AL FEEMI GF+PD + FV VLSAC+ AG V G R
Sbjct: 427 SRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHR 486
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F M +++ I P+++HY CM+DLL R+G EA ++ NM MEP+ +WG+LLN+CR+H
Sbjct: 487 YFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIH 546
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
+ E +A ++F L E +G+Y+LLSNIYA +GRW+D AK+R KG+KKV G +
Sbjct: 547 GQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTS 606
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
IE+ +H F G+ +N+ +L+E+ +E G VPD +L++M
Sbjct: 607 IEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETGFVPDTSEVLYDM 656
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/655 (32%), Positives = 350/655 (53%), Gaps = 25/655 (3%)
Query: 59 ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
A+ A +++ YA RL A + F+ P + ++L N+++ A+
Sbjct: 84 ADPCPVSATSLVAAYAAADRLPAAVSFFDAVP-PARRDTVLHNAVISAYARASHAAPAVA 142
Query: 119 LYVKMRKLGVL-GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNEL 177
++ + G L D ++F ++ A + + R +H VL+ G G + + N L
Sbjct: 143 VFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHC--AQLHCSVLKSGAGGALSVCNAL 200
Query: 178 IGMYAKMGQ---MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
+ +Y K D+ K+ D++ K+ ++W M G+ D A +F+ E++G
Sbjct: 201 VALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFE--EVDG-- 256
Query: 235 PNF-VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
F V W +++S + G E +LF M + + VLS CA++ GK
Sbjct: 257 -KFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKS 315
Query: 294 IHGFVIK--GGF--EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+HG +I+ F E + V NAL+ Y K G++ VA+ +F + K++VSWN +++ Y
Sbjct: 316 VHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYV 375
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
E+ D+AVEVF + M N +SW ++ + G E+AL LF KM+ V
Sbjct: 376 ESSCLDKAVEVFEE--------MPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVK 427
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
T +G ++ C E AL G+++HGH+V++ + N L+ MY +CG ++E HL+
Sbjct: 428 PCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLM 487
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F + D ++WN+MIS G +G G AL F+ M+ G PD ++F+ VL+AC+H+GLV
Sbjct: 488 FLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLV 547
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+EG R F+ M R+F I P +HY ++DLLGRAG + EA D++K MP EP +W +L+
Sbjct: 548 DEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILS 607
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
CR + ++ A Q+F + + G+Y+LLSN Y+A+G W DAA+VR + +G+KK
Sbjct: 608 GCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKE 667
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G SWIE K+H+F G++ + V + LE + +M G VPD ++L +M
Sbjct: 668 PGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEMVGAKMRKLGYVPDTKVVLHDM 722
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/701 (31%), Positives = 359/701 (51%), Gaps = 104/701 (14%)
Query: 63 AFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVK 122
A L ++++ +Y + G + AR VF+ K + +WN I+ G +E +L L+V+
Sbjct: 350 AALGSKLVFMYVKCGDMASARRVFDA--MSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQ 407
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M +LG+ D +++ + R G + H +++++GF + N LI YA
Sbjct: 408 MHELGIAPDEHAISCLLKCITCLSCARD----GLVAHGYIVKLGFGAQCAVCNALISFYA 463
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K + D+ +F+++ ++ IS W S
Sbjct: 464 KSNMIGDAVLVFNRMPRQDTIS-----------------------------------WNS 488
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
++S + G E ++LF M +G E+ + + VL CA G+V+HG+ +K G
Sbjct: 489 VISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTG 548
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE------ 356
+ NAL+ +Y D + +F + +KN+VSW A+ITSY AGL D+
Sbjct: 549 LIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQ 608
Query: 357 ----------------AVEVFSQLEKLDGG----------SMER---------------- 374
A+ F+ E L G ME+
Sbjct: 609 EMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCR 668
Query: 375 --------------PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
+VISW+ +IG ++ N E+ LF M L + N+VT++ +L
Sbjct: 669 NVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDM-LLQFRPNAVTMTCILP 727
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
A ++L GREIH + +R ++ N L++MY+KCG L ++F+++ KK+LI+
Sbjct: 728 AAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLIS 787
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
W MI+GYGM+G G++A+A FE+M +G +PD +F A+L AC H+GL EGRR F M
Sbjct: 788 WTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQ 847
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
+E++IEP+++HY C+VDLL R G L+EA + +++MP+EP++ +W +LL+ CR+HKN +A
Sbjct: 848 KEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLA 907
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
E +A ++F L E TG Y+LL+NIYA + RWE K++ +GL++ G SWIEV+ K
Sbjct: 908 EKVADKVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSK 967
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+H+F + N D + E L+++A +M +G P L
Sbjct: 968 VHVFIADNRNHPDWNRIAEFLDDVARRMRQEGHDPKKKYAL 1008
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 221/503 (43%), Gaps = 92/503 (18%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA-PFDCKSSSLLWNSILRVNV 108
+H L G + +A ++++Y+R GR+ DA VF++ P D ++ WNS++
Sbjct: 226 IHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRD----AISWNSMIGGCF 281
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
SNG + A+ L+ KM G T V+ AC +G G+ VH + ++ G
Sbjct: 282 SNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLI----GKAVHGYSVKSGLL 337
Query: 169 GNVHIV----------NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
+ V ++L+ MY K G M+ + ++FD + K
Sbjct: 338 WGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKG----------------- 380
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
N W ++ +A+ G EE++ LF M + GI AI+ +
Sbjct: 381 -----------------NVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCL 423
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
L L+ G V HG+++K GF +C
Sbjct: 424 LKCITCLSCARDGLVAHGYIVKLGFG-----AQCAVC----------------------- 455
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
NALI+ YA++ + +AV VF++ M R + ISW++VI +SNG EA++
Sbjct: 456 ---NALISFYAKSNMIGDAVLVFNR--------MPRQDTISWNSVISGCSSNGLNSEAIE 504
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
LF +M +SVT+ +L CA+S GR +HG+ V+ + + N LL+MY
Sbjct: 505 LFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYS 564
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
C + + +F + +K++++W +MI+ Y GL + +EM+ G +PD A +
Sbjct: 565 NCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTS 624
Query: 519 VLSACSHAGLVNEGRRIFDMMVR 541
L A + + +G+ + +R
Sbjct: 625 ALHAFAGDESLKQGKSVHGYTIR 647
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 169/384 (44%), Gaps = 65/384 (16%)
Query: 227 RMELEGLEP---NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
R +G+ P + WTSL+S++A+ G +E + LF M+ G+ A A++ VL +
Sbjct: 156 RTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVS 215
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
L + G+VIHG + K G V NALI VY + G ++ A +F + ++ +SWN+
Sbjct: 216 SLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNS 275
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+I G SNG A+DLF KM
Sbjct: 276 MI---------------------------------------GGCFSNGWHGTAVDLFSKM 296
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI-LVQNG---------L 453
+SVT+ +L CA IG+ +HG+ V+ + + VQ+G L
Sbjct: 297 WSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKL 356
Query: 454 LNMYMKCGCLEEGHLVFEQIEKK-DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
+ MY+KCG + VF+ + K ++ WN ++ GY G E +L+ F +M E G PD
Sbjct: 357 VFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPD 416
Query: 513 GVAFVAVLS-----ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
A +L +C+ GLV G + + Q ++ ++ ++ +
Sbjct: 417 EHAISCLLKCITCLSCARDGLVAHG------YIVKLGFGAQCAVCNALISFYAKSNMIGD 470
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSC 591
A + MP + + W ++++ C
Sbjct: 471 AVLVFNRMPRQ-DTISWNSVISGC 493
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 123/254 (48%), Gaps = 15/254 (5%)
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
L+ +Y + G EA VF DG + +V W++++ A+A G +EA+ LFR+M
Sbjct: 142 LVLAYLKCGDLGEARTVF------DGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQM 195
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
Q V ++ +S +L + +L G IHG + ++ + + V N L+ +Y +CG +
Sbjct: 196 QCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRM 255
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
E+ VF+ + +D I+WNSMI G NG A+ F +M G + V ++VL AC
Sbjct: 256 EDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPAC 315
Query: 524 SHAGLVNEGRRIFDMMVREF------RIEPQMEHYAC---MVDLLGRAGLLQEASDIVKN 574
+ G G+ + V+ ++ ++ A +V + + G + A +
Sbjct: 316 AGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDA 375
Query: 575 MPMEPNAYVWGTLL 588
M + N +VW ++
Sbjct: 376 MSSKGNVHVWNLIM 389
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 152/353 (43%), Gaps = 26/353 (7%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
H +++ Q K VH I G +A ++ +Y + + +AR +F+
Sbjct: 627 HAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVT---NK 683
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ WN+++ N + L+ M L + T ++ A + S G
Sbjct: 684 DVISWNTLIGGYSRNNFPNESFSLFSDML-LQFRPNAVTMTCILPAAASISSLE----RG 738
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ +H + L+ GF + + N L+ MY K G + + LFD++ KN ISW +M +G+ ++
Sbjct: 739 REIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMH 798
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAE- 273
A+ LF++M G+EP+ +++++L + G E F M+K IE +
Sbjct: 799 GFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKH 858
Query: 274 --AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
I +LS DL K F+ E + +L+ H +VK+A+ +
Sbjct: 859 YTCIVDLLSRTGDL------KEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVAD 912
Query: 332 EI---EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV-ISW 380
++ E +N + L YAEA E E +L+ GG R N SW
Sbjct: 913 KVFKLEPENTGYYVLLANIYAEA----ERWEAVKKLKNKIGGRGLRENTGYSW 961
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/613 (33%), Positives = 337/613 (54%), Gaps = 49/613 (7%)
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + L WN+++R + + +AL LYV M LG+ + +TFP + ++C + +
Sbjct: 40 EPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQE--- 96
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H +L+ G ++H+ LI MYA+ G + D+ K+FD ++ +S+ M +G+A
Sbjct: 97 -GKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYA 155
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ D A ++F + ++ + V+W +++S +A GR +E ++LF+ M K ++
Sbjct: 156 SRGNMDKAQKMFDEIPIK----DVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDES 211
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+A VLS C +G+ IH ++ GF
Sbjct: 212 TMATVLSTCTHSGNVELGRQIHSWIDNHGFG----------------------------- 242
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
N+ NALI Y++ G + A +F L+ D VISW+ +IG +A
Sbjct: 243 --SNLKLVNALIDLYSKCGEMERAHGLFEGLQYKD--------VISWNTLIGGYAYINHH 292
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV--SMNKNILVQN 451
+EAL +F++M N VT+ +L CA A++IGR IH ++ + + N +Q
Sbjct: 293 KEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQT 352
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++MY KCG +E + VF+ I K L + N+MI G+ M+G + A M + G +P
Sbjct: 353 SLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEP 412
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D + FV +LSACSHAGL + GR+IF M ++RIEP++EHY CM+DLLGR+GL +EA ++
Sbjct: 413 DDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEEL 472
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
+ +M MEP+ +WG+LL +C++HKN ++ E +A ++ + + GSY+LLSNIYA S RW
Sbjct: 473 INSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARW 532
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
+D A+VR KGLKKV G S IE+ +H F G+ K + ++LEE+ +
Sbjct: 533 DDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAET 592
Query: 692 GCVPDNDIILWEM 704
G V D +L EM
Sbjct: 593 GFVSDTSEVLQEM 605
Score = 192 bits (487), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 114/392 (29%), Positives = 205/392 (52%), Gaps = 22/392 (5%)
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
A+ +FK ++ EPN ++W +++ HA ++L+ M G+ + +
Sbjct: 31 AISVFKSIQ----EPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFK 86
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
CA A GK IH ++K G + V +LI +Y ++G V+ A +F +++VS
Sbjct: 87 SCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVS 146
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
+ A+IT YA G D+A ++F ++ D V+SW+A+I +A GR +EAL+LF
Sbjct: 147 YTAMITGYASRGNMDKAQKMFDEIPIKD--------VVSWNAMISGYAEIGRYKEALELF 198
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
+M V + T++ +LS C S + +GR+IH + N+ + N L+++Y KC
Sbjct: 199 NEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKC 258
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
G +E H +FE ++ KD+I+WN++I GY + AL F+EM++ G P+ V +++L
Sbjct: 259 GEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSIL 318
Query: 521 SACSHAGLVNEGRRIFDMMVREFR-IEPQMEHYACMVDLLGRAGLLQEAS---DIVKNMP 576
AC+H G ++ GR I + ++ + I ++D+ + G ++ A+ D + N
Sbjct: 319 PACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKS 378
Query: 577 MEP-NAYVWGTLLNSCRMHKNTDVAEAMASQI 607
+ NA ++G MH D A + S++
Sbjct: 379 LSSCNAMIFG-----FAMHGRADAAFDLLSRM 405
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 137/590 (23%), Positives = 248/590 (42%), Gaps = 107/590 (18%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L + C K + KQ+H Q++ G + ++S+YA+ G + DA VF+T+
Sbjct: 81 FPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSS 140
Query: 91 F-DCKSSSLL---------------------------WNSILRVNVSNGLYENALKLYVK 122
D S + + WN+++ G Y+ AL+L+ +
Sbjct: 141 HRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNE 200
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M K+ V D T V+ C G+ G+ +H+ + GF N+ +VN LI +Y+
Sbjct: 201 MMKMDVKPDESTMATVLSTCTHSGNVEL----GRQIHSWIDNHGFGSNLKLVNALIDLYS 256
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K G+M + LF+ ++ K+ ISWN + G+A AL +F+ M G PN VT S
Sbjct: 257 KCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLS 316
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK-- 300
+L CA L A +G+ IH ++ K
Sbjct: 317 -----------------------------------ILPACAHLGAIDIGRWIHVYIDKKL 341
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G ++ +LI +Y K G+++ A +F I K++ S NA+I +A G D A ++
Sbjct: 342 KGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDL 401
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG-LL 419
S+++K DG P+ I++ ++ A + G + +F+ M L + + G ++
Sbjct: 402 LSRMKK-DG---IEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMI 457
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE---QIEKK 476
+ S E+ + ++M + ++ LL LE G L+ + +IE K
Sbjct: 458 DLLGRSGLFKEAEEL---INSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPK 514
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
+ ++ + + Y + ++ + + G K + CS +
Sbjct: 515 NPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKK--------VPGCSSIEI-------- 558
Query: 537 DMMVREF----RIEPQMEHYACMVD----LLGRAGLLQEASDIVKNMPME 578
D MV EF + PQ + M++ LL G + + S++++ M E
Sbjct: 559 DSMVHEFLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEE 608
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 139/314 (44%), Gaps = 44/314 (14%)
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
S++ PN +SW+ +I A + AL+L+ M + NS T L CA+S A
Sbjct: 37 SIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQE 96
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE------------------- 471
G++IH +++ + ++ V L++MY + G +E+ H VF+
Sbjct: 97 GKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYAS 156
Query: 472 ------------QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
+I KD+++WN+MISGY G + AL F EM++ KPD V
Sbjct: 157 RGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATV 216
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
LS C+H+G V GR+I + ++ ++DL + G ++ A + + + +
Sbjct: 217 LSTCTHSGNVELGRQIHS-WIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYK- 274
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS-------GRWE 632
+ W TL+ + A + ++ L ET +LS + A + GRW
Sbjct: 275 DVISWNTLIGGYAYINHHKEALLVFQEMLKL-GETPNDVTMLSILPACAHLGAIDIGRW- 332
Query: 633 DAAKVRISAKTKGL 646
V I K KG+
Sbjct: 333 --IHVYIDKKLKGI 344
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/613 (33%), Positives = 341/613 (55%), Gaps = 49/613 (7%)
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + L+WN++LR + +ALKLYV M LG+L + +TFP ++++C +F
Sbjct: 28 EPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEE--- 84
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
GQ +H HVL++G++ ++++ LI MYA+ G++ D+ K+FD+ ++ +S+ + +G+A
Sbjct: 85 -GQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYA 143
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ + A E+F + ++ + V+W +++S +A G +E ++LF M K +
Sbjct: 144 SSGNIRSAQEMFDEIPVK----DVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEG 199
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ VLS CA + +G+ +H ++ +D+ F N I
Sbjct: 200 TMVTVLSACAQSRSVELGRQVHSWI-----DDHGFGSNLKIV------------------ 236
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
NALI Y++ G + A +F L D V+SW+ +IG +
Sbjct: 237 --------NALIDLYSKCGQVETACGLFEGLSCKD--------VVSWNTLIGGYTHMNLY 280
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV--SMNKNILVQN 451
+EAL LF++M + N VTI +L CA A++IGR IH ++ + + ++
Sbjct: 281 KEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRT 340
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++MY KCG +E H VF + K L +WN+MI G+ M+G F M + G +P
Sbjct: 341 SLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEP 400
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D + FV +LSACSH+G ++ GR IF M +++ I P++EHY CM+DLLG +GL +EA ++
Sbjct: 401 DDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEM 460
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
+K MPMEP+ +W +LL +CR H N ++AE+ A + + E GSY+LLSNIYA +G W
Sbjct: 461 IKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEW 520
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
++ AKVR KG+KKV G S IE+ ++H F G+ L + + +LEE+ +E
Sbjct: 521 DEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRNREIYGMLEEMEALLEEA 580
Query: 692 GCVPDNDIILWEM 704
G VPD +L EM
Sbjct: 581 GFVPDTSEVLQEM 593
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 121/250 (48%), Gaps = 33/250 (13%)
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
+++ PN + W+ ++ +A + AL L+ M ++ NS T LL CA+S A
Sbjct: 24 ATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFE 83
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV-------------------- 469
G++IHGHV+++ ++ V L++MY + G LE+ H V
Sbjct: 84 EGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYA 143
Query: 470 -----------FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
F++I KD+++WN+MISGY G + AL F+EM++ +PD V
Sbjct: 144 SSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVT 203
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
VLSAC+ + V GR++ + + ++ ++DL + G ++ A + + + +
Sbjct: 204 VLSACAQSRSVELGRQVHS-WIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCK 262
Query: 579 PNAYVWGTLL 588
+ W TL+
Sbjct: 263 -DVVSWNTLI 271
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 155/327 (47%), Gaps = 16/327 (4%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
Q +++ +QVH+ + G ++ + ++ +Y++ G++ A +FE CK +
Sbjct: 210 QSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG--LSCK-DVVS 266
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN+++ LY+ AL L+ +M + G + T ++ AC +G+ G+ +H
Sbjct: 267 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGA----IDIGRWIH 322
Query: 160 NHVLQ--MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
++ + + LI MYAK G + + ++F+ + K+ SWN M GFA++
Sbjct: 323 VYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGR 382
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIA 276
+ +LF RM G+EP+ +T+ LLS+ + G+L+ +F M + I E
Sbjct: 383 ANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYG 442
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL---FSEI 333
++ + L + K + E + +L+ +HG++++A++ ++
Sbjct: 443 CMIDL---LGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKV 499
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEV 360
E +N S+ L YA AG DE +V
Sbjct: 500 EPENPGSYVLLSNIYATAGEWDEVAKV 526
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/607 (34%), Positives = 326/607 (53%), Gaps = 78/607 (12%)
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
LWN+++R VSN +++A++ Y MR G L + FTFP V++AC + G
Sbjct: 78 FLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARL----LDLQLGVK 133
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H V++ GF +V + L+ +YAK G + D+ K+FD + KN +SW + SG+
Sbjct: 134 IHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGK 193
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
A+++F+R+ L P D F ++R
Sbjct: 194 FREAIDMFRRLLEMNLAP----------------------DSFTIVR------------- 218
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
VLS C L + G+ IH +++ G VFV +L+ +Y K G+++ A+++F + EK+
Sbjct: 219 VLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKD 278
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
IVSW A+I YA GL EA+++F Q
Sbjct: 279 IVSWGAMIQGYALNGLPKEAIDLFLQ---------------------------------- 304
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
MQ V + T+ G+LS CA AL +G + G V R N ++ L+++Y
Sbjct: 305 -----MQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLY 359
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG + VF+ +++KD + WN++ISG MNG + + F ++ + G KPDG F+
Sbjct: 360 AKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFI 419
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
+L C+HAGLV+EGRR F+ M R F + P +EHY CMVDLLGRAGLL EA +++NMPM
Sbjct: 420 GLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPM 479
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
E NA VWG LL +CR+H++T +AE Q+ L +G+Y+LLSNIY+A+ +W++AAKV
Sbjct: 480 EANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKV 539
Query: 638 RISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
R+S K ++K G SWIEV +H F G+ + + L+EL +M+ G VP
Sbjct: 540 RLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTT 599
Query: 698 DIILWEM 704
D +L+++
Sbjct: 600 DFVLFDI 606
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/558 (36%), Positives = 314/558 (56%), Gaps = 64/558 (11%)
Query: 176 ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
+L+ YA G+ + +FD++ KN + +N+M + N AL +FK M G++P
Sbjct: 1065 KLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDP 1124
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
+ T+ +L + + G+E + V G IH
Sbjct: 1125 DHYTYPCVLKASS----------------------GSEDLWV-------------GMQIH 1149
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
V++ G + VFV N LI +YGK G + A + Z+ +++VSWN+L+ A G D
Sbjct: 1150 AAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFD 1209
Query: 356 EAVEVFSQLE----KLDGGSMER--PNV-----------------------ISWSAVIGA 386
+A+EV ++E K D G+M P V +SW+ +I
Sbjct: 1210 DALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAV 1269
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
+ +N EA+D+F +M+ V ++++I+ +L C + +AL +GR IH +VVR + N
Sbjct: 1270 YMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPN 1329
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+L++N L++MY KCGCLE VF+Q++ +D+++W SMIS YGMNG G +A++ F M +
Sbjct: 1330 LLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQD 1389
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
G PD +AFV+VLSACSHAGL++EGR F +M E +I P++EH+ CMVDLLGRAG +
Sbjct: 1390 LGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVD 1449
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
EA +K MPMEPN VWG LL++CR++ N + A Q+F L E +G Y+LLSNIYA
Sbjct: 1450 EAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYA 1509
Query: 627 ASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELAL 686
+GRWED VR KTKG+KK+ G S E+ ++H F +G+ K + E L+ L
Sbjct: 1510 KAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVG 1569
Query: 687 QMENKGCVPDNDIILWEM 704
+M+ G VP+ D L ++
Sbjct: 1570 KMKEAGYVPETDSALHDV 1587
Score = 169 bits (427), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 229/455 (50%), Gaps = 49/455 (10%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVT-GANASAFLAARVLSIYARFGRLFDARNVFETAPFDCK 94
+L + I LK++H+++ + +++ L +++ YA G + R++F+ P K
Sbjct: 1032 QILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIP---K 1088
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
+ + +N ++R V+N LY +AL ++ M G+ D +T+P V++A S
Sbjct: 1089 KNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKA----SSGSEDLWV 1144
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G +H V+++G NV + N LI MY K G + ++ ++ D++ ++ +SWN + +G A
Sbjct: 1145 GMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCAR 1204
Query: 215 NFDCDGALELFKRMELEGLEPN---------------------------------FVTWT 241
N D ALE+ K MEL GL+P+ V+W
Sbjct: 1205 NGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWN 1264
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
+++ + E +D+F M ++ A +IA VL C DL+A +G+ IH +V++
Sbjct: 1265 VMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRK 1324
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
+ + ++NALI +Y K G ++ A+ +F +++ +++VSW ++I++Y G +AV +F
Sbjct: 1325 RLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLF 1384
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM-QLAKVVANSVTISGLLS 420
S+++ L P+ I++ +V+ A + G +E F+ M + K+V ++
Sbjct: 1385 SRMQDLGLN----PDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVD 1440
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
+ + ++ E +G + ++ M N V LL+
Sbjct: 1441 LLGRAGQVD---EAYGFIKQMPMEPNERVWGALLS 1472
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 146/295 (49%), Gaps = 23/295 (7%)
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA-----LITSYAEAGLCDEAVEVF 361
V +N + K+ D+K + L S+I + + N L+ +YA G +F
Sbjct: 1024 VLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIF 1083
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
++ K NV+ ++ +I ++ +N +AL +F+ M + + T +L
Sbjct: 1084 DEIPK--------KNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKA 1135
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
+ S L +G +IH VVRV ++ N+ V NGL++MY KCGCL E V +Z+ +D+++W
Sbjct: 1136 SSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSW 1195
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG--RRIFDMM 539
NS+++G NG ++AL +EM G KPD ++L A ++ L N + +F +
Sbjct: 1196 NSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKL 1255
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDI---VKNMPMEPNAYVWGTLLNSC 591
+ + + M+ + + EA DI +++ ++P+A ++L +C
Sbjct: 1256 ANKSLVS-----WNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPAC 1305
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 103/225 (45%), Gaps = 12/225 (5%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+++H ++ + L ++ +YA+ G L AR VF+ F + W S++
Sbjct: 1315 RRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKF---RDVVSWTSMISAY 1371
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRFSFGQIVHNHVLQMG 166
NG +A+ L+ +M+ LG+ D F V+ AC G R+ F + +
Sbjct: 1372 GMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPR 1431
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELF 225
+ V +V+ L+G + GQ+ +++ ++ ++ N W + S A + + L
Sbjct: 1432 IEHFVCMVD-LLG---RAGQVDEAYGFIKQMPMEPNERVWGALLS--ACRVYSNMIIGLL 1485
Query: 226 KRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
+L L P + LLS+ +A+ GR E+ + +M+ +GI+
Sbjct: 1486 AADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIK 1530
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/654 (33%), Positives = 346/654 (52%), Gaps = 98/654 (14%)
Query: 30 LLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA 89
L C DH + +++ KQ+H+ +I G + S ++++Y++ G++ +A VF
Sbjct: 18 LQSCADH-----QNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDP 72
Query: 90 PFDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
C ++ +N+I+ VSNGL + Y KMR GV+ D +TFP V+R C +
Sbjct: 73 ---CHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV 129
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
+ +H +L+MG + +V + + L+ Y K G M D+ K+F ++ +++ + WN M
Sbjct: 130 K-------KIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAM 182
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+G+A D ALE+F+RM ++G+ P+ T T +LS A G L+
Sbjct: 183 INGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDN------------- 229
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
GK +HG V+K G++ V V NALI +YGK + A
Sbjct: 230 ----------------------GKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALI 267
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+F I EK+I SWN++I+ + + G D + +F
Sbjct: 268 IFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFD-------------------------- 301
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK--- 445
KM + ++ + VTI+ +L C+ AAL GREIHG+++ + K
Sbjct: 302 -------------KMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDE 348
Query: 446 -----NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
N+LV N +++MY KCG + +F+ + KKD+ +WN MI GYGM+G AL
Sbjct: 349 NGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGM 408
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F +M EA FKP+ V V VLSAC+HAG V+ GR M F + P +EHY C++D+LG
Sbjct: 409 FSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLG 468
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML 620
RAG L++A +IV+ MP++ N VW LL +CR+H N ++AE A Q+ L E GSY+L
Sbjct: 469 RAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVL 528
Query: 621 LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
+SN+Y GR+E+ +VR + K + +KK G SWIE+K +H+F +G+ S+L
Sbjct: 529 MSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCSWIELKDGVHVFRTGDRTHSEL 582
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 89/184 (48%), Gaps = 6/184 (3%)
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
+++ N L CA+ LN G+++H ++ + + L+NMY KCG + E
Sbjct: 6 QMLNNVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEA 65
Query: 467 HLVF-EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
LVF + ++++ +N++ISG+ NGL +++M G PD F V+ C
Sbjct: 66 ILVFYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCE 125
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
V E ++I +++ +E + + +V+ + G +++A + + + + +W
Sbjct: 126 ---VMEVKKIHGCLLK-MGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIR-DVVLWN 180
Query: 586 TLLN 589
++N
Sbjct: 181 AMIN 184
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/684 (32%), Positives = 367/684 (53%), Gaps = 65/684 (9%)
Query: 22 SIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFD 81
S I N L+D + +C ++V +++ + F VLS+ +FG+L +
Sbjct: 52 SEIFIQNRLVDAYG----KCGYFEDARKVFDRM----PQRNTFSYNAVLSVLTKFGKLDE 103
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
A NVF++ P + WN+++ + +E AL+ +V M + + ++F + A
Sbjct: 104 AFNVFKSMP---EPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSA 160
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C + + G +H + + + +V++ + L+ MY+K G ++ + + FD + V+N
Sbjct: 161 CAGLTDL----NMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRN 216
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
V+W SL++ + + G + +++F
Sbjct: 217 -----------------------------------IVSWNSLITCYEQNGPAGKALEVFV 241
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK-GGFEDYVFVKNALICVYGKH 320
MM G+E +A V+S CA +A G IH V+K + + + + NAL+ +Y K
Sbjct: 242 MMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKC 301
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
V A+ +F + +N+VS +++ YA A A +FS + ME+ NV+SW
Sbjct: 302 RRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNM-------MEK-NVVSW 353
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+A+I + NG EEA+ LF ++ + T LL+ CA A L +GR+ H +++
Sbjct: 354 NALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILK 413
Query: 441 VSM------NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
+I V N L++MYMKCG +E+G LVFE++ ++D+++WN+MI GY NG G
Sbjct: 414 HGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYG 473
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
NAL F +M+ +G KPD V + VLSACSHAGLV EGRR F M E + P +H+ C
Sbjct: 474 TNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTC 533
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
MVDLLGRAG L EA+D+++ MPM+P+ VWG+LL +C++H N ++ + +A ++ +
Sbjct: 534 MVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLN 593
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
+G Y+LLSN+YA GRW+D +VR + +G+ K G SWIE++ ++H+F +
Sbjct: 594 SGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQSRVHVFMVKDKRHPLK 653
Query: 675 KNVCEVLEELALQMENKGCVPDND 698
K++ VL+ L QM+ G VP+ D
Sbjct: 654 KDIHLVLKFLTEQMKWAGYVPEAD 677
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 216/437 (49%), Gaps = 19/437 (4%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H +++ F + I N L+ Y K G D+ K+FD++ +N S+N + S
Sbjct: 41 IHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGK 100
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
D A +FK M EP+ +W +++S A+ R EE + F M + +
Sbjct: 101 LDEAFNVFKSMP----EPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGS 156
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
LS CA L +MG IH + K + V++ +AL+ +Y K G V AQ F + +N
Sbjct: 157 ALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRN 216
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
IVSWN+LIT Y + G +A+EVF + +D G P+ I+ ++V+ A AS E L
Sbjct: 217 IVSWNSLITCYEQNGPAGKALEVFVMM--MDNGV--EPDEITLASVVSACASWSAIREGL 272
Query: 398 DLF-RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
+ R ++ K + V + L+ + A+ +N R + R+ + +N++ + ++
Sbjct: 273 QIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFD---RMPL-RNVVSETSMVCG 328
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y + ++ L+F + +K++++WN++I+GY NG E A+ F + P F
Sbjct: 329 YARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTF 388
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVRE---FRIEPQMEHYA--CMVDLLGRAGLLQEASDI 571
+L+AC++ + GR+ +++ F+ + + + ++D+ + G++++ +
Sbjct: 389 GNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLV 448
Query: 572 VKNMPMEPNAYVWGTLL 588
+ M +E + W ++
Sbjct: 449 FERM-VERDVVSWNAMI 464
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 153/306 (50%), Gaps = 8/306 (2%)
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
+ A +L C + + IH +IK F +F++N L+ YGK G + A+ +F
Sbjct: 19 SSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFD 78
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+ ++N S+NA+++ + G DEA VF SM P+ SW+A++ FA +
Sbjct: 79 RMPQRNTFSYNAVLSVLTKFGKLDEAFNVFK--------SMPEPDQCSWNAMVSGFAQHD 130
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
R EEAL F M V N + LS CA LN+G +IH + + ++ + +
Sbjct: 131 RFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGS 190
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++MY KCG + F+ + +++++WNS+I+ Y NG AL F M++ G +P
Sbjct: 191 ALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEP 250
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D + +V+SAC+ + EG +I +V+ + + +VD+ + + EA +
Sbjct: 251 DEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLV 310
Query: 572 VKNMPM 577
MP+
Sbjct: 311 FDRMPL 316
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 106/252 (42%), Gaps = 35/252 (13%)
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
+S + LL C S + R IH +++ + I +QN L++ Y KCG E+ VF
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 471 EQIEKK-------------------------------DLITWNSMISGYGMNGLGENALA 499
+++ ++ D +WN+M+SG+ + E AL
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALR 137
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
F +M F + +F + LSAC+ +N G +I ++ + R + + +VD+
Sbjct: 138 FFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKS-RYLLDVYMGSALVDMY 196
Query: 560 GRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYM 619
+ G++ A M + N W +L+ +C +N +A+ + + +
Sbjct: 197 SKCGVVACAQRAFDGMAVR-NIVSWNSLI-TC-YEQNGPAGKALEVFVMMMDNGVEPDEI 253
Query: 620 LLSNIYAASGRW 631
L+++ +A W
Sbjct: 254 TLASVVSACASW 265
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/645 (32%), Positives = 353/645 (54%), Gaps = 30/645 (4%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S Y G + AR+VFE P + + +++N+++ N +A+ L+ KM+ G
Sbjct: 86 MVSGYCASGDIALARSVFEETPVSMRDT-VMYNAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV--LQMGFQGNVHIVNELIGMYAKMGQ 186
D FT+ V+ + Q V H L+ G + N L+ +Y++
Sbjct: 145 KPDDFTYASVLAGLALVVD-----DEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCAS 199
Query: 187 ----MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN--FVTW 240
+ + K+FD + K+ SW M +G+ N G +L K + L+G++ N V +
Sbjct: 200 SPSLLHSARKVFDDIPEKDERSWTTMMTGYVKN----GCFDLGKEL-LKGMDENMKLVAY 254
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
+++S + CG +E +++ M GIE+ V+ CA+ +GK +H +V++
Sbjct: 255 NAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLR 314
Query: 301 GGFEDYVF-VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
ED+ F N+L+ +Y K G A+ +F ++ K++VSWNAL++ Y +G EA
Sbjct: 315 R--EDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
+F + M+ N++SW +I A NG GEE L LF M+ SG +
Sbjct: 373 IFKE--------MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAI 424
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
CA A G++ H +V++ + ++ N L+ MY KCG +EE VF + D +
Sbjct: 425 KSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSV 484
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN++I+ G +G G A+ +EEM++ G +PD + F+ VL+ACSHAGLV++GR+ F+ M
Sbjct: 485 SWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSM 544
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
+RI P +HYA ++DLL R+G EA I++++P +P A +W LL+ CR+H N ++
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMEL 604
Query: 600 AEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKR 659
A ++FGLI E G+YMLLSN+YAA+G+WE+ A+VR + +G+KK SWIE++
Sbjct: 605 GIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMET 664
Query: 660 KIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
++H F ++ + + V + L++L +M G VPD +L ++
Sbjct: 665 QVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDV 709
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 224/495 (45%), Gaps = 52/495 (10%)
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
R + VH +++ GFQ + HI+N LI +Y K ++ + +LFD++ + I+ M
Sbjct: 27 RTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTM 86
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
SG+ + D A +F+ + + V + ++++ + ++LF M+ G
Sbjct: 87 VSGYCASGDIALARSVFEETPVSMRDT--VMYNAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 269 EVGAEAIAVVLSVCADLAADHMGKV-IHGFVIKGGFEDYVFVKNALICVYGKHGD----V 323
+ A VL+ A + D V H +K G V NAL+ VY + +
Sbjct: 145 KPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLL 204
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
A+ +F +I EK+ SW ++T Y + G D E+ ++ E +++++A+
Sbjct: 205 HSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMD-------ENMKLVAYNAM 257
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
I + + G +EAL++ R+M + + + T ++ CA + L +G+++H +V+R
Sbjct: 258 ISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRRE- 316
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY--------------- 488
+ + N L+ +Y KCG E +FE++ KDL++WN+++SGY
Sbjct: 317 DFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 489 ----------------GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
NG GE L F M GF+P AF + +C+ G G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
++ +V+ + + ++ + + G+++EA + + MP ++ W L+ +
Sbjct: 437 QQFHAQLVK-IGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPC-LDSVSWNALIAALG 494
Query: 593 MH----KNTDVAEAM 603
H + DV E M
Sbjct: 495 QHGHGVEAVDVYEEM 509
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 16/227 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+Q H QL+ G ++S ++++YA+ G + +A+ VF T P C S+ WN+++
Sbjct: 437 QQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMP--CL-DSVSWNALIAAL 493
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG---SFRFRFSFGQIVHNHVLQ 164
+G A+ +Y +M K G+ D TF V+ AC G R F+ + V+
Sbjct: 494 GQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIP-- 551
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMMFSGFALNFDCDGALE 223
G H LI + + G+ S++ + + + K W + SG ++ + + L
Sbjct: 552 ---PGADHYA-RLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNME--LG 605
Query: 224 LFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
+ +L GL P LLS+ +A G+ EE + +MR RG++
Sbjct: 606 IIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVK 652
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 33/152 (21%)
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
L + +AN + L + +L + R +HG+++ + + N L+++Y K L
Sbjct: 6 DLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSEL 65
Query: 464 EEGHLVFEQIEK---------------------------------KDLITWNSMISGYGM 490
+ +F++I + +D + +N+MI+G+
Sbjct: 66 DYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSH 125
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
N G +A+ F +M GFKPD + +VL+
Sbjct: 126 NNDGYSAINLFCKMKHEGFKPDDFTYASVLAG 157
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/686 (32%), Positives = 368/686 (53%), Gaps = 91/686 (13%)
Query: 29 SLLDCFDHLLQQCKTIHQLKQVHNQLIVTG--ANASAFLAARVLSIYARFGRLFDARNVF 86
SL +DHLLQ C ++ LK +H+ L G + FLA R++ +Y++ G L AR +F
Sbjct: 23 SLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLA-RLIILYSKLGDLHSARTLF 81
Query: 87 ETAPFDC-----KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
+ +S L N++LR + G A+ LY+ M+++GV + FT+P V++
Sbjct: 82 DHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKV 141
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C + FG++VH V++ GF ++ + L+ MYAK G++ D+ ++FD++ +++
Sbjct: 142 C----ASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRD 197
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
V WT++++ + + R + + LF
Sbjct: 198 -----------------------------------VVCWTAMITLYEQAERPLKALMLFR 222
Query: 262 MMRKRGIEVGAEAIAV-VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
M++ G +G E A+ V S L M +HG+ + GF
Sbjct: 223 KMQEEGF-LGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFI---------------- 265
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
GDV V N+++ YA+ G + A VF ++E+ +G ISW
Sbjct: 266 GDVSVG---------------NSIVGMYAKCGNVERARLVFDRMEERNG--------ISW 302
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
++++ + NGR +AL LF +MQ ++ N VT ++S C+ + ++GR++H V+
Sbjct: 303 NSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVIS 362
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE--KKDLITWNSMISGYGMNGLGENAL 498
M+ + ++N +++MYMKCG L+ +F E ++D+ +WN +ISGYG++G G+ AL
Sbjct: 363 SKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEAL 422
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
F M G +P+ + F ++LSACSHAGL++EGR+ F M + + P+M+HYACMVD+
Sbjct: 423 ELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACMVDM 481
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
LGRAG L EA ++K +P P+ VWG LL +CR+H NT++ E A+ +F L E TG Y
Sbjct: 482 LGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYY 541
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
+L+SNIYAAS +W++ VR + K++GLKK A S IE ++H F + + + V
Sbjct: 542 VLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVY 601
Query: 679 EVLEELALQMENKGCVPDNDIILWEM 704
+E LA++M+ G VPD +L ++
Sbjct: 602 RKVESLAIEMKMVGYVPDLSCVLHDV 627
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/635 (33%), Positives = 328/635 (51%), Gaps = 24/635 (3%)
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
LY +R + D P +++C + +H + G + + + L+
Sbjct: 7 LYHFLRHVSFPPDPHLLPSALKSCPAQ-------PLARALHAAAVVSGLAEDPFVASSLL 59
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
Y ++G + +FD++ KN + W+ + +G++ D + A L ++M G+EPN +
Sbjct: 60 HSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVI 119
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
TW L+S R GR + + M G A ++ LS D+ +GK +HG+V
Sbjct: 120 TWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYV 179
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
+K G V ALI +YGK G +F E ++ S NAL+ + EA+
Sbjct: 180 VKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEAL 239
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
+F + G + NV+SW++++ NGR EA+DLFR MQ V NSVTI +
Sbjct: 240 LLFREF-ICRGVEL---NVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCV 295
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
L A AAL GR H +R ++ V + L++MY KCG +F+ + +++
Sbjct: 296 LPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNV 355
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
++WN+MI GY M+G NA+ F M + KPD V F VL ACS AGL EGRR F+
Sbjct: 356 VSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNE 415
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
M + I P+MEHYACMV LLGR+G L EA D++ MP EP++ +WG+LL SCR++ N
Sbjct: 416 MQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVL 475
Query: 599 VAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
+AE A ++F L G+Y+LLSNIYA+ W+ +VR K GLKK G SWIE+K
Sbjct: 476 LAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIK 535
Query: 659 RKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRA 718
K+HM +G++ + + E L +L ++M G P D +L + ++
Sbjct: 536 NKVHMLLAGDNSHPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHD---------VEEQEK 586
Query: 719 DNIKSKHRIVGFRNLKLGLRLLLSLRSTNGQLMKN 753
DNI + H L + L L+ + T +++KN
Sbjct: 587 DNILAVHS----EKLAVALGLISTRPGTPLRVIKN 617
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 150/360 (41%), Gaps = 74/360 (20%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFDCKSSSLL------- 99
KQVH ++ G A + ++ +Y + GR + VF E++ D S + L
Sbjct: 173 KQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRN 232
Query: 100 ------------------------WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
W SI+ V NG A+ L+ M+ +GV + T
Sbjct: 233 AQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTI 292
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
P V+ A + + G+ H L+ GF +V++ + L+ MYAK G+ + +FD
Sbjct: 293 PCVLPAFANVAALM----HGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFD 348
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
+ +N +SWN M G+A++ D A++LF M+ +P+ VT+T +L + ++ G EE
Sbjct: 349 AMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEE 408
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
F+ M++ G I E Y ++
Sbjct: 409 GRRYFNEMQQ------------------------------GHGISPRMEHYA----CMVT 434
Query: 316 VYGKHGDVKVAQNLFSEIE-EKNIVSWNALITS---YAEAGLCDEAVEVFSQLEKLDGGS 371
+ G+ G + A +L +E+ E + W +L+ S Y L + A E QLE + G+
Sbjct: 435 LLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGN 494
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 234/731 (32%), Positives = 375/731 (51%), Gaps = 76/731 (10%)
Query: 33 CFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGR---LFDARNVFETA 89
C + L+ CKT++QLKQ+H Q+ G + ++++ A L AR FE
Sbjct: 27 CLNESLRCCKTLNQLKQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELF 86
Query: 90 PFDCKSSSLLW--NSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
D +S L+ NS++R S GL A+ LYV+M LGV + +TFP V+ C + +
Sbjct: 87 KEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAA 146
Query: 148 F--------------------------RFRFSFGQIVHNHVLQMGF-QGNVHIVNELIGM 180
F F G + H H + G + NV LI
Sbjct: 147 FCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICG 206
Query: 181 YAKMGQMSDSFKLFDKV-----------------------------RVKNYISW------ 205
YA+ + ++ LF ++ RV YI
Sbjct: 207 YARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLN 266
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
+M + + GA++ KR+ E ++ N V + ++LS++AR G E + + D M +
Sbjct: 267 KVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQ 326
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
+G + +S A L GKV HG+VI+ G E + + N +I +Y K G ++
Sbjct: 327 QGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEM 386
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A +F + K +VSWN+L + G + A EVF+Q+ ER N + W+ +I
Sbjct: 387 ACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIP-------ER-NAVFWNTMIS 438
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
E+A++LFR+MQ + A+ VT+ G+ S C A + + +H ++ + +
Sbjct: 439 GLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPC 498
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
++ + L++M+ +CG + VF ++ ++D+ W + I M G GE A F +M+
Sbjct: 499 DMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQML 558
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
G KPD V FV VL+ACSH G V +G IF +M + I PQ+EHY CMVDLLGRAGLL
Sbjct: 559 IQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLL 617
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
+EA D++K+MPMEPN VWG+LL +CR+HKN ++A A +I L + G ++LLSNIY
Sbjct: 618 REAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIY 677
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A++G+W D A+VR++ + KG++KV G S ++V IH F+SG+ ++ ++ +L+E+
Sbjct: 678 ASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMN 737
Query: 686 LQMENKGCVPD 696
+ + G +PD
Sbjct: 738 CRFSDAGHIPD 748
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/668 (33%), Positives = 367/668 (54%), Gaps = 61/668 (9%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLS---IYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
++ +H Q+I TG + + + +++L + F A +VF+T + + L+WN++
Sbjct: 4 VRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQ---EPNLLIWNTM 60
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
R + + +ALKLY+ M LG+L D +TFP ++++C + R GQ +H HVL
Sbjct: 61 FRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSC---AKSKIRKE-GQQIHGHVL 116
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
++GF ++++ LI MYA+ G++ D+ K+FD ++ +S+ + +G+ + A +
Sbjct: 117 KLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQK 176
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVC 282
LF E+ G + V+W +++S + G +E ++LF +MM + + V+S C
Sbjct: 177 LFD--EIPG--KDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSAC 232
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
A + +G+ +H ++ GF + + NALI +Y K G+V+ A LF + K+++SWN
Sbjct: 233 AQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWN 292
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
LI Y L EA+ +F ++ + S E P
Sbjct: 293 TLIGGYTHMNLYKEALLLFQEMLR----SGETP--------------------------- 321
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR----VSMNKNILVQNGLLNMYM 458
N VT+ +L CA A++IGR IH ++ + V N + L Q L++MY
Sbjct: 322 --------NDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSL-QTSLIDMYA 372
Query: 459 KCGCLEEGHLVFE-QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG ++ VF+ + + L TWN+MISG+ M+G A F M G +PD + FV
Sbjct: 373 KCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFV 432
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
+LSACSH+G+++ GR IF M R + I P++EHY CM+DLLG +GL +EA +++ MPM
Sbjct: 433 GLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPM 492
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
EP+ +W +LL +C++H N ++ E+ A ++ + +GSY+LLSNIYAA+GRW + AK+
Sbjct: 493 EPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKI 552
Query: 638 RISAKTKGL-KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
R KG+ KKV G S IE+ +H F G+ L + + +LEE+ + +E G VPD
Sbjct: 553 RALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPD 612
Query: 697 NDIILWEM 704
+L EM
Sbjct: 613 TSEVLQEM 620
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 118/235 (50%), Gaps = 12/235 (5%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
Q +I + VH+ + G ++ + ++ +Y++FG + A +F+ +
Sbjct: 234 QSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGL---WNKDVIS 290
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN+++ LY+ AL L+ +M + G + T ++ AC +G+ G+ +H
Sbjct: 291 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA----IDIGRWIH 346
Query: 160 NHVLQ--MGFQGNV-HIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMMFSGFALN 215
++ + G NV + LI MYAK G + + ++FD +S WN M SGFA++
Sbjct: 347 VYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMH 406
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
+ A ++F RM + G+EP+ +T+ LLS+ + G L+ ++F M RG E+
Sbjct: 407 GRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSM-TRGYEI 460
>gi|357481301|ref|XP_003610936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512271|gb|AES93894.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 812
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/671 (31%), Positives = 360/671 (53%), Gaps = 54/671 (8%)
Query: 36 HLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA-PF 91
HLL C K++ Q KQ+H +I G + + L +++++ YA L DA+ V E + F
Sbjct: 97 HLLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECSNSF 156
Query: 92 DCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR 151
D L WN ++ + V N L+E+A+ +Y +M GV+ D +T+P V++AC +
Sbjct: 157 D----PLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGEL----LD 208
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
+ G VH + + + ++ + N L+ MY + G++ + +LFD + ++ +SWN M S
Sbjct: 209 YDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISC 268
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+A D A LF M G+E N + W ++ G + + LF MR I++
Sbjct: 269 YASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMRAV-IQLD 327
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
+ A+ V L+ C+ + A +GK IHG ++ F+ + VKN LI +Y + D+ A LF
Sbjct: 328 SVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFR 387
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+I+EK + I+W+A++ FA
Sbjct: 388 KIDEKGL---------------------------------------ITWNAMLSGFAHMD 408
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR--VSMNKNILV 449
R EE L R+M V N VTI+ +L +CA A L G+E H ++V+ +L+
Sbjct: 409 RSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLL 468
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
N L+ MY + G + E VF+ + +KD +T+ SMI GYG++G GE AL F EM
Sbjct: 469 WNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNI 528
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
KPD V VAVL ACSH+GLV +G+ +F M+ + I+P++EHY+CMVDL GRAGLL +A
Sbjct: 529 KPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAK 588
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASG 629
+++ M +P + +W TL+ +C++H NT + E A ++ + + +G Y+L++N+YAA+
Sbjct: 589 EVITGMSCKPTSAIWATLIGACKIHGNTVIGEWAAGKLLEMKPDHSGYYLLIANMYAAAN 648
Query: 630 RWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
R + A+ R + G K+ G +W++V R++ F +G++ + +++ L + M+
Sbjct: 649 RLDKEAEARTYMRDSGAKRTPGCAWVDVGRELCPFLAGDTSNPRSCEISPMMKRLNILMK 708
Query: 690 NKGCVPDNDII 700
+ G P ++
Sbjct: 709 DAGYAPSEGVV 719
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 106/267 (39%), Gaps = 39/267 (14%)
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ I +L C +L + GK IH +I G + + LI Y + AQ +
Sbjct: 93 QPIKHLLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAEC 152
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ + WN +I+ Y + L ++A+ V
Sbjct: 153 SNSFDPLHWNMVISLYVKNCLFEDAISV-------------------------------- 180
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
+R+M V+ + T +L C E + G +H + S+ ++ V N
Sbjct: 181 -------YRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQESSIKWSLFVHNA 233
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L+ MY + G LE +F+ + +D ++WN+MIS Y GL + A F M EAG + +
Sbjct: 234 LVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERN 293
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMM 539
+ + + C H G ++F M
Sbjct: 294 IIIWNTIAGGCLHTGNFKGALKLFSQM 320
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 3/177 (1%)
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
I LL C +L+ G++IH H++ + +++N ++ + L+N Y L + +V E
Sbjct: 95 IKHLLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECSN 154
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
D + WN +IS Y N L E+A++ + M+ G PD + +VL AC + G
Sbjct: 155 SFDPLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVA 214
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
+ ++E I+ + + +V + GR G L+ A ++ MP + W T++ SC
Sbjct: 215 VHK-AIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDV-SWNTMI-SC 268
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/675 (30%), Positives = 355/675 (52%), Gaps = 51/675 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE-TAPFDCKSSSLLWNSILRV 106
+QVH ++ G + ++ ++ +Y + G L +A+ V E DC S WNSI+
Sbjct: 154 RQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVS----WNSIITA 209
Query: 107 NVSNGLYENAL-----------------------------------KLYVKMRKLGVLGD 131
V+NG+ AL +L+ +M GV D
Sbjct: 210 CVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPD 269
Query: 132 GFTFPLVIRACKFMGSFRFRFSF-GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
T V+ AC R ++ F G+ +H ++++ N + N L+GMY + G M +
Sbjct: 270 ARTLASVLPACS-----RMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSA 324
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
FK+F K K S+N M G+ N + A ELF +ME EG+E + ++W ++S H
Sbjct: 325 FKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDN 384
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
++ + LF + GIE + + +L+ AD+ GK IH I G + FV
Sbjct: 385 FMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVG 444
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
AL+ +Y K D+ AQ F EI E++ +WNALI+ YA C++ ++ +E++
Sbjct: 445 GALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYAR---CNQIGKIRELVERMKSD 501
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
E PNV +W++++ N + + A+ LF +MQ++ + + T+ +L+ C++ A ++
Sbjct: 502 GFE-PNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHR 560
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
G+++H + +R + + + L++MY KCG ++ + V+ +I +L+ N+M++ Y M
Sbjct: 561 GKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAM 620
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
+G GE + F M+++ +PD V F++VLS+C HAG + G F +M + I P ++
Sbjct: 621 HGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLM-ETYNITPTLK 679
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL 610
HY CMVDLL RAG L EA ++KNMPME ++ W LL C +HK + E A ++ L
Sbjct: 680 HYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIEL 739
Query: 611 ITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSL 670
TG+Y+LL+N+YA++GRW D AK R KG++K G SWIE + +H+F + +
Sbjct: 740 EPSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFLASDKS 799
Query: 671 QSDLKNVCEVLEELA 685
++ + +L+ L
Sbjct: 800 HQRVEEIYFMLDNLT 814
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 177/641 (27%), Positives = 299/641 (46%), Gaps = 70/641 (10%)
Query: 3 HSLLHQP--------HQFSPSNPS----RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQV 50
H+L+ P HQ P N S P + TY+ +LQ ++ KQ+
Sbjct: 2 HTLVSDPLTLPPLPKHQTKPPNFSLLHTPPLTSTTYST--------ILQSSNSLTLGKQL 53
Query: 51 HNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSN 110
H+ I TG F+ ++L +Y+ DA ++F+ S W ++LR++++
Sbjct: 54 HSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHS---WTAVLRLHLNM 110
Query: 111 GLYENALKLYVKM--RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
GL+ L+ + LG D F FP+V+ C +G G+ VH VL+ GF
Sbjct: 111 GLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLEL----GRQVHGMVLKHGFV 166
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
NV++ N LI MY K G + ++ K+ + + K+ +SWN + + N AL+L + M
Sbjct: 167 TNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENM 226
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
L LEPN VTW++++ + E+++LF M G+ A +A VL C+ +
Sbjct: 227 LLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWL 286
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+GK +HG++++ FV NAL+ +Y + GD+K A +FS+ K S+N +I Y
Sbjct: 287 FVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGY 346
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
E G +A E+F Q+E+ +G +R ISW+ +I N ++AL LFR + + +
Sbjct: 347 LENGNVGKAKELFYQMEQ-EGVERDR---ISWNCMISGHVDNFMFDDALMLFRDLLMEGI 402
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+S T+ +L+ A+ + G+EIH + + N V L+ MY KC + +
Sbjct: 403 EPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQM 462
Query: 469 VFEQIEKKDLITWNSMISGYG------------------------------MNGLGEN-- 496
F++I ++D TWN++ISGY + GL EN
Sbjct: 463 AFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQ 522
Query: 497 ---ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
A+ F EM + +PD +L+ACS ++ G+++ +R + A
Sbjct: 523 YDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRA-GYDSDAHIGA 581
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+VD+ + G ++ V N PN +L + MH
Sbjct: 582 TLVDMYAKCGSIKHCYQ-VYNKISNPNLVCHNAMLTAYAMH 621
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 106/229 (46%), Gaps = 11/229 (4%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
TIH+ KQVH I G ++ A + A ++ +YA+ G + V+ + + N+
Sbjct: 557 TIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKIS---NPNLVCHNA 613
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
+L +G E + ++ +M V D TF V+ +C GS + + ++ +
Sbjct: 614 MLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMETYN 673
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCD-G 220
+ + +V+ L ++ G++ ++++L + ++ + ++W+ + G ++ + G
Sbjct: 674 ITPTLKHYTCMVDLL----SRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALG 729
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+ K +ELE N + L + +A GR + ++M +G++
Sbjct: 730 EIAAEKLIELE--PSNTGNYVLLANLYASAGRWHDLAKTRELMNDKGMQ 776
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 229/761 (30%), Positives = 383/761 (50%), Gaps = 116/761 (15%)
Query: 11 QFSPSNPSRPFSIITYNNSLLDCFDH----LLQQCKTIHQLKQVHNQLIVTGANASAFLA 66
Q P + S + N + ++H LL++C ++ +L+ + + G
Sbjct: 13 QIPPISSSHRHFLSQRNYIPANVYEHPAALLLERCSSLKELRHILPLIFKNGLYQEHLFQ 72
Query: 67 ARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL 126
+++S++ R+G + +A VFE P D K ++L+ ++L+ + ALK +V+MR
Sbjct: 73 TKLVSLFCRYGSVDEAARVFE--PID-KKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDD 129
Query: 127 GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ 186
V + F +++ C R G+ +H +++ GF ++ + L MYAK Q
Sbjct: 130 EVEPVVYNFTYLLKVCGDEAELR----VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQ 185
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
+ ++ K+FD++ ++ +SWN + +G++ N ALE+ M E L+P+F+T S+L +
Sbjct: 186 VHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPA 245
Query: 247 -----------------------------------HARCGRLEETMDLFDMMRKRGI--- 268
+A+CG L+ LFD M +R +
Sbjct: 246 VSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSW 305
Query: 269 ----------EVGAEAIAV------------------VLSVCADLAADHMGKVIHGFVIK 300
E EA+ + L CADL G+ IH ++
Sbjct: 306 NSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
+ V V N+LI +Y K +V A ++F +++ + IVSWNA+I +A+ G EA+
Sbjct: 366 LELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNY 425
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
FSQ++ +P+ ++ +VI A
Sbjct: 426 FSQMQ----ARTVKPDTFTYVSVITAI--------------------------------- 448
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
AE + + + IHG V+R ++KN+ V L++MY KCG + L+F+ + ++ + T
Sbjct: 449 --AELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTT 506
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WN+MI GYG +G+G+ AL FEEM + +P+GV F++V+SACSH+GLV G + F MM
Sbjct: 507 WNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMK 566
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
+ IEP M+HY MVDLLGRAG L EA D + MP++P V+G +L +C++HKN + A
Sbjct: 567 ENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFA 626
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
E +A ++F L E G ++LL+NIY A+ WE +VR+S +GL+K G S +E+K +
Sbjct: 627 EKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNE 686
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+H F SG++ K + LE+L Q++ G VPD ++IL
Sbjct: 687 VHSFFSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL 727
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/689 (32%), Positives = 361/689 (52%), Gaps = 64/689 (9%)
Query: 36 HLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
H+L+ C + + H + G ++ F+ ++++Y+R G L +A +F+
Sbjct: 167 HVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQR 226
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKM------RKLGVLGDGFTFPLVIRACKFMG 146
+ WNSI+ +V + AL L+ KM + D + ++ AC G
Sbjct: 227 GIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPAC---G 283
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
S + + VH + ++ G +V + N LI YAK G M ++ K+F+ + K+ +SWN
Sbjct: 284 SLK-AVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWN 342
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
M +G++ + + + A ELFK M E + + VTWT++++ +++ G E ++LF M
Sbjct: 343 AMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFS 402
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK----------GGFEDYVFVKNALICV 316
G I VLS CA L A G IH + +K GG ++ + V NALI +
Sbjct: 403 GSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 462
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
Y K K A+++F +I +E N
Sbjct: 463 YSKCRSFKAARSIFDDIP-------------------------------------LEERN 485
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREI 434
V++W+ +IG A G +AL LF +M + V N+ TIS +L CA AA+ IG++I
Sbjct: 486 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 545
Query: 435 HGHVVRVSMNKN--ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
H +V+R ++ V N L++MY KCG ++ VF+ + +K I+W SM++GYGM+G
Sbjct: 546 HAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHG 605
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
G AL F++M +AGF PD + F+ VL ACSH G+V++G FD M ++ + P+ EHY
Sbjct: 606 RGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHY 665
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
AC +DLL R+G L +A VK+MPMEP A VW LL++CR+H N ++AE +++ +
Sbjct: 666 ACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNA 725
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
E GSY L+SNIYA +GRW+D A++R K G+KK G SW++ ++ F G+
Sbjct: 726 ENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHP 785
Query: 673 DLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ +LE L +++ G VP+ + L
Sbjct: 786 LSPQIYALLESLIDRIKAMGYVPETNFAL 814
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 168/600 (28%), Positives = 292/600 (48%), Gaps = 81/600 (13%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGA---------------NASAFLAAR-----VLSIY 73
F LL++CK+ + + Q+H Q+I +G + F++ R V++ Y
Sbjct: 47 FASLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASY 106
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
G A V E S ++ WN ++R ++ G ++A+ + +M + G D F
Sbjct: 107 LACGATDYALLVLERVT---PSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHF 163
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
T P V++AC + S+R G H + GF+ NV I N L+ MY++ G + ++ +
Sbjct: 164 TLPHVLKACGELPSYR----CGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 219
Query: 194 FDKVR---VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
FD++ + + ISWN + S + + AL+LF +M L E
Sbjct: 220 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHE---------------- 263
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
+ T + D++ +I +L C L A K +HG I+ G VFV
Sbjct: 264 ---KPTNERSDII----------SIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVG 310
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
NALI Y K G ++ A +F+ +E K++VSWNA++ Y+++G + A E+F + K +
Sbjct: 311 NALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKEN-- 368
Query: 371 SMERP-NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
P +V++W+AVI ++ G EAL+LFR+M + + N VTI +LS CA A +
Sbjct: 369 ---IPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFS 425
Query: 430 IGREIHGHVVRVSM----------NKNILVQNGLLNMYMKCGCLEEGHLVFEQI--EKKD 477
G EIH + ++ + +++++V N L++MY KC + +F+ I E+++
Sbjct: 426 QGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERN 485
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEA--GFKPDGVAFVAVLSACSHAGLVNEGRRI 535
++TW MI G+ G +AL F EMI G P+ +L AC+H + G++I
Sbjct: 486 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 545
Query: 536 FDMMVREFRIEPQMEHYA-CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
++R R E A C++D+ + G + A + +M + +A W +++ MH
Sbjct: 546 HAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMH 604
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/678 (32%), Positives = 367/678 (54%), Gaps = 65/678 (9%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLS---IYARFGRLFDARNVFETAPFDC 93
LL CKT+ L+ +H Q+I TG + + + ++++ + F L A +VFET
Sbjct: 8 LLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQ--- 64
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + L+WN++ R + + +AL LYV M LG+L + +TFP ++++C +FR
Sbjct: 65 EPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFRE--- 121
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
GQ +H HVL++G+ ++++ LI MY + G++ D+ K+FD+ ++ +S+ + +G+A
Sbjct: 122 -GQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYA 180
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
A ++F + ++ + V+W +++S +A G +E ++LF M K +
Sbjct: 181 SKGYIASAQKMFDEIPIK----DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDES 236
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ V+S CA A+ +G+ +H ++ GF + + NALI +Y K G+V
Sbjct: 237 TMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEV---------- 286
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
+ A +F L D VISW+ +IG +
Sbjct: 287 ---------------------ETACGLFEGLSYKD--------VISWNTLIGGYTHMNLY 317
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL-VQNG 452
+EAL LF++M + N VT+ +L CA A+ IGR IH V +NK + V N
Sbjct: 318 KEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIH-----VYINKRLKGVANA 372
Query: 453 ------LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
L++MY KCG +E VF+ I + L +WN+MI G+ M+G A F M +
Sbjct: 373 SSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRK 432
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
+PD + FV +LSACSH+G+++ GR IF M +++I P++EHY CM+DLLG +GL +
Sbjct: 433 NEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFK 492
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
EA +++ M MEP+ +W +LL +C+M+ N ++ E+ A + + + GSY+LLSNIYA
Sbjct: 493 EAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYA 552
Query: 627 ASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELAL 686
+GRW + AK+R KG+KKV G S IE+ +H F G+ + + +LEE+ +
Sbjct: 553 TAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 612
Query: 687 QMENKGCVPDNDIILWEM 704
+E G VPD +L EM
Sbjct: 613 LLEEAGFVPDTSEVLQEM 630
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 369/727 (50%), Gaps = 104/727 (14%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
LL+ C ++ +L Q+ +I G +++S+++++G + +A VFE P D K
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFE--PIDDKLD 112
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
+L ++++L+ N E AL +MR V + F +++ C + G+
Sbjct: 113 AL-YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKR----GK 167
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H ++ F NV + ++ MYAK Q+ D++K+FD++
Sbjct: 168 EIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP------------------ 209
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
E + V+W ++++ ++ G ++ ++L M+ G + +
Sbjct: 210 -----------------ERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLV 252
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
VL AD+ +GK IHG+ I+ GF V + AL +Y K G V+ A+ +F +++K
Sbjct: 253 TVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQK 312
Query: 337 NIVSWNALITSYA----------------EAGLCDEAVEVFSQLEKL-DGGSMERPNVI- 378
+VSWN+++ Y E G+ V + L D G +ER +
Sbjct: 313 TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVH 372
Query: 379 --------------------------------------------SWSAVIGAFASNGRGE 394
SW+A+I +A NGR
Sbjct: 373 KFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVS 432
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
EAL+ F +M+ + +S T+ ++ AE + + IHG ++R ++KNI V L+
Sbjct: 433 EALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALV 492
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCG + +F+ I + +ITWN+MI GYG +GLG AL F++M + +P+ +
Sbjct: 493 DMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDI 552
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
+++V+SACSH+GLV+EG R F M +++ +EP M+HY MVDLLGRAG ++EA D ++N
Sbjct: 553 TYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIEN 612
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP+ P V+G +L +C++HKN +V E A ++F L + G ++LL+NIYA++ +W
Sbjct: 613 MPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKV 672
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
A+VR + + KGLKK G S +E++ ++H F SG++ K + LEEL +++ G V
Sbjct: 673 AEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYV 732
Query: 695 PDNDIIL 701
PD ++IL
Sbjct: 733 PDTNLIL 739
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/676 (30%), Positives = 362/676 (53%), Gaps = 67/676 (9%)
Query: 30 LLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYAR---------FGRLF 80
L++ F LL++CK+I QLKQ+ +Q+++TG F ++R+++ A LF
Sbjct: 5 LINPFLSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILF 64
Query: 81 DARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL-GVLGDGFTFPLVI 139
+ RN ++ WN +R + + A+ LY ++ + G D +T+PL+
Sbjct: 65 NTRN----------PNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLF 114
Query: 140 RACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV 199
+AC + R G + HVL +GF ++ + N +I + G + + K+FDK V
Sbjct: 115 KACARLSLIRM----GSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCV 170
Query: 200 KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDL 259
++ V+W S+++ + R G E ++
Sbjct: 171 RD-----------------------------------LVSWNSMINGYVRRGWAYEALNF 195
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
+ M+ GI+ + V+S CA L +G+ H ++ + G + V + NAL+ +Y K
Sbjct: 196 YREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMK 255
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
G+++ A+ LF + K +VSW ++ YA++GL D A ++F ++ D V+
Sbjct: 256 CGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKD--------VVP 307
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVV 439
W+A+IG + RG+EAL LF +MQ + + VT+ LS C++ AL++G IH ++
Sbjct: 308 WNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIE 367
Query: 440 RVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
+ ++ N+ + L++MY KCG + + VF+++ ++ +TW ++ISG ++G A+A
Sbjct: 368 KHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIA 427
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
F EMI+ PD V F+ +LSAC H GLV EGR+ F M +F + P+++HY+CMVDLL
Sbjct: 428 YFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLL 487
Query: 560 GRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYM 619
GRAGLL+EA +++K+MP+E +A VWG L +CR+H N + E AS++ + +G Y+
Sbjct: 488 GRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYV 547
Query: 620 LLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCE 679
LL+N+Y + W++A K R + +G++K G S IEV ++ F + + + E
Sbjct: 548 LLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYE 607
Query: 680 VLEELALQMENKGCVP 695
L +L Q+E C P
Sbjct: 608 CLIQLTRQLELVECTP 623
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 241/737 (32%), Positives = 396/737 (53%), Gaps = 64/737 (8%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSIL----- 104
VH ++I +G S +L ++++Y++ G AR +F+ P ++ WN++L
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPL---RTAFSWNTVLSAYSK 92
Query: 105 ----------------RVNVS----------NGLYENALKLYVKMRKLGVLGDGFTFPLV 138
R +VS G Y A+++ M K G+ FT V
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 139 ---IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
+ A + M + G+ VH+ ++++G +GNV + N L+ MYAK G + +FD
Sbjct: 153 LASVAATRCMET-------GKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ V++ SWN M + D A+ F++M E + VTW S++S + G
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA----ERDIVTWNSMISGFNQRGYDLR 261
Query: 256 TMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
+D+F M+R + +A VLS CA+L +GK IH ++ GF+ V NALI
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 315 CVYGKHGDVKVAQNLFSEIEEKN--IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
+Y + G V+ A+ L + K+ I + AL+ Y + G ++A +F L+ D
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD---- 377
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
V++W+A+I + +G EA++LFR M NS T++ +LSV + A+L+ G+
Sbjct: 378 ----VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE-KKDLITWNSMISGYGMN 491
+IHG V+ ++ V N L+ MY K G + F+ I ++D ++W SMI +
Sbjct: 434 QIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQH 493
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G E AL FE M+ G +PD + +V V SAC+HAGLVN+GR+ FDMM +I P + H
Sbjct: 494 GHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSH 553
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
YACMVDL GRAGLLQEA + ++ MP+EP+ WG+LL++CR+HKN D+ + A ++ L
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLE 613
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
E +G+Y L+N+Y+A G+WE+AAK+R S K +KK G SWIEVK K+H+F +
Sbjct: 614 PENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTH 673
Query: 672 SDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVK-RIQRIRADNIKSKHRIVGF 730
+ + ++++ +++ G VPD +L ++ ++ VK +I R ++ + ++
Sbjct: 674 PEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDL--EEEVKEQILRHHSEKLAIAFGLIST 731
Query: 731 RNLKLGLRLLLSLRSTN 747
+ K LR++ +LR N
Sbjct: 732 PD-KTTLRIMKNLRVCN 747
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 233/484 (48%), Gaps = 48/484 (9%)
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
RF+ Q+VH V++ G +V+++N L+ +Y+K G + KLFD++ ++ SWN + S
Sbjct: 30 RFT-AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLS 88
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
++ D D E F ++ + + V+WT+++ + G+ + + + M K GIE
Sbjct: 89 AYSKRGDMDSTCEFFDQLP----QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP 144
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+ VL+ A GK +H F++K G V V N+L+ +Y K GD +A+ +F
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+ ++I SWNA+I + + G D A+ F Q+ + D +++W+++I F
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD--------IVTWNSMISGFNQR 256
Query: 391 GRGEEALDLFRKMQLAKVVA-NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
G ALD+F KM +++ + T++ +LS CA L IG++IH H+V + + +V
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQ---------------------------------IEKK 476
N L++MY +CG +E + EQ ++ +
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D++ W +MI GY +G A+ F M+ G +P+ A+LS S ++ G++I
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
V+ I A ++ + +AG + AS + E + W +++ + H +
Sbjct: 437 GSAVKSGEIYSVSVSNA-LITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 597 TDVA 600
+ A
Sbjct: 496 AEEA 499
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 166/389 (42%), Gaps = 56/389 (14%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE------ 87
+L C + +L KQ+H+ ++ TG + S + ++S+Y+R G + AR + E
Sbjct: 285 VLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 88 ------TAPFDC------------------KSSSLLWNSILRVNVSNGLYENALKLYVKM 123
TA D + W +++ +G Y A+ L+ M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 124 RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
G + +T A + S S G+ +H ++ G +V + N LI MYAK
Sbjct: 405 VGGGQRPNSYTLA----AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 184 MGQMSDSFKLFDKVRV-KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
G ++ + + FD +R ++ +SW M A + + ALELF+ M +EGL P+ +T+
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV-----IHGF 297
+ S+ G + + FDMM+ + I LS A + D G+ F
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKD------VDKIIPTLSHYACM-VDLFGRAGLLQEAQEF 573
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDV---KVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
+ K E V +L+ H ++ KVA +E +N +++AL Y+ G
Sbjct: 574 IEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKW 633
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAV 383
+EA ++ ++ G +++ SW V
Sbjct: 634 EEAAKIRKSMKD---GRVKKEQGFSWIEV 659
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/442 (39%), Positives = 291/442 (65%), Gaps = 8/442 (1%)
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
M +G++ ++ V+ CA +A+ GK H ++IK GFE V V+ AL+ +Y + G
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
++ A ++F ++ E++ +WNA+IT +A+ +A+++F ++ + D V+SW+A
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERD--------VVSWTA 112
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS 442
VI +A NG G+E+L++F +M+ + ++ + +LS CA+ AAL +GR+ H +VV+
Sbjct: 113 VIAGYAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSG 172
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFE 502
+I+V + L++MY K G +E+ VF+++ +++ ++WNS+I+G +G G +A+ FE
Sbjct: 173 FALDIVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFE 232
Query: 503 EMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRA 562
+M++AG KP+ ++FV VLSACSH GLVNEGR F++M + + I P + HY CM+DLLGRA
Sbjct: 233 QMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRA 292
Query: 563 GLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLS 622
G L EA + + MP+EP+ VWG LL +CR+H NT++A+ +A + G+ + G Y+LLS
Sbjct: 293 GCLDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLS 352
Query: 623 NIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLE 682
NIYAA+G+W+DAAKVR K +G+ K G SWIEVK +H F +G + LK + E LE
Sbjct: 353 NIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLE 412
Query: 683 ELALQMENKGCVPDNDIILWEM 704
L+ +M+ G VP+ + +L ++
Sbjct: 413 SLSRKMKAAGYVPNKNFVLQDV 434
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 162/277 (58%), Gaps = 12/277 (4%)
Query: 127 GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ 186
GV + FT V++AC + S G+ HN++++MGF+ +V + L+ MYA+ G
Sbjct: 5 GVKPNQFTLSTVVKACASIASLEQ----GKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
+ D+ +FDK+ ++ +WN M +G A N D AL+LF M E + V+WT++++
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMS----ERDVVSWTAVIAG 116
Query: 247 HARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY 306
+A+ G +E++++F+ MRK G++ + VLS CADLAA +G+ H +V++ GF
Sbjct: 117 YAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALD 176
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
+ V +AL+ +Y K G ++ A +F ++ ++N VSWN++IT A+ G ++AV +F Q+
Sbjct: 177 IVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQM-- 234
Query: 367 LDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
L G +PN IS+ V+ A + G E F M
Sbjct: 235 LQAGI--KPNEISFVGVLSACSHTGLVNEGRGYFNLM 269
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 189/416 (45%), Gaps = 61/416 (14%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
++ Q KQ HN +I G + + ++ +YAR G L DA +VF+ + S+ WN+
Sbjct: 25 SLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMS---ERSTRTWNA 81
Query: 103 ILRVNVSNGLYENALKLYV-------------------------------KMRKLGVLGD 131
++ + N + ALKL+ +MRK G+ D
Sbjct: 82 MITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSD 141
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
F V+ AC + + G+ H +V+Q GF ++ + + L+ MYAK G M D+
Sbjct: 142 RFIMGSVLSACADLAALE----LGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDAC 197
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
++FDK+ +N +SWN + +G A + + A+ LF++M G++PN +++ +LS+ + G
Sbjct: 198 QVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTG 257
Query: 252 RLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCADLAA-DHMGKVIHGFVIKGGFEDYVFV 309
+ E F++M + GI ++ + D I+G + E V V
Sbjct: 258 LVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPV----EPDVSV 313
Query: 310 KNALICVYGKHGDVKVAQNLFSEI--EEKNIVSWNALITS-YAEAGLCDEAVEVFSQLEK 366
AL+ HG+ ++A+ + + E I L+++ YA AG D+A +V ++
Sbjct: 314 WGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMK- 372
Query: 367 LDGGSMERPNVISW---SAVIGAFASNGRGEEAL--------DLFRKMQLAKVVAN 411
D G M++P SW ++ AF + L L RKM+ A V N
Sbjct: 373 -DRGVMKQPG-YSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVPN 426
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 224/689 (32%), Positives = 361/689 (52%), Gaps = 64/689 (9%)
Query: 36 HLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
H+L+ C + + H + G ++ F+ ++++Y+R G L +A +F+
Sbjct: 160 HVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQR 219
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKM------RKLGVLGDGFTFPLVIRACKFMG 146
+ WNSI+ +V + AL L+ KM + D + ++ AC G
Sbjct: 220 GIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPAC---G 276
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
S + + VH + ++ G +V + N LI YAK G M ++ K+F+ + K+ +SWN
Sbjct: 277 SLK-AVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWN 335
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
M +G++ + + + A ELFK M E + + VTWT++++ +++ G E ++LF M
Sbjct: 336 AMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFS 395
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK----------GGFEDYVFVKNALICV 316
G I VLS CA L A G IH + +K GG ++ + V NALI +
Sbjct: 396 GSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDM 455
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
Y K K A+++F +I +E N
Sbjct: 456 YSKCRSFKAARSIFDDIP-------------------------------------LEERN 478
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREI 434
V++W+ +IG A G +AL LF +M + V N+ TIS +L CA AA+ IG++I
Sbjct: 479 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 538
Query: 435 HGHVVRVSMNKN--ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
H +V+R ++ V N L++MY KCG ++ VF+ + +K I+W SM++GYGM+G
Sbjct: 539 HAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHG 598
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
G AL F++M +AGF PD + F+ VL ACSH G+V++G FD M ++ + P+ EHY
Sbjct: 599 RGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHY 658
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
AC +DLL R+G L +A VK+MPMEP A VW LL++CR+H N ++AE +++ +
Sbjct: 659 ACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNA 718
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
E GSY L+SNIYA +GRW+D A++R K G+KK G SW++ ++ F G+
Sbjct: 719 ENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHP 778
Query: 673 DLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ +LE L +++ G VP+ + L
Sbjct: 779 LSPQIYALLESLIDRIKAMGYVPETNFAL 807
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 168/600 (28%), Positives = 292/600 (48%), Gaps = 81/600 (13%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGA---------------NASAFLAAR-----VLSIY 73
F LL++CK+ + + Q+H Q+I +G + F++ R V++ Y
Sbjct: 40 FASLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASY 99
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
G A V E S ++ WN ++R ++ G ++A+ + +M + G D F
Sbjct: 100 LACGATDYALLVLERVT---PSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHF 156
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
T P V++AC + S+R G H + GF+ NV I N L+ MY++ G + ++ +
Sbjct: 157 TLPHVLKACGELPSYR----CGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 212
Query: 194 FDKVR---VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
FD++ + + ISWN + S + + AL+LF +M L E
Sbjct: 213 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHE---------------- 256
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
+ T + D++ +I +L C L A K +HG I+ G VFV
Sbjct: 257 ---KPTNERSDII----------SIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVG 303
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
NALI Y K G ++ A +F+ +E K++VSWNA++ Y+++G + A E+F + K +
Sbjct: 304 NALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKEN-- 361
Query: 371 SMERP-NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
P +V++W+AVI ++ G EAL+LFR+M + + N VTI +LS CA A +
Sbjct: 362 ---IPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFS 418
Query: 430 IGREIHGHVVRVSM----------NKNILVQNGLLNMYMKCGCLEEGHLVFEQI--EKKD 477
G EIH + ++ + +++++V N L++MY KC + +F+ I E+++
Sbjct: 419 QGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERN 478
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEA--GFKPDGVAFVAVLSACSHAGLVNEGRRI 535
++TW MI G+ G +AL F EMI G P+ +L AC+H + G++I
Sbjct: 479 VVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 538
Query: 536 FDMMVREFRIEPQMEHYA-CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
++R R E A C++D+ + G + A + +M + +A W +++ MH
Sbjct: 539 HAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMH 597
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 224/741 (30%), Positives = 372/741 (50%), Gaps = 127/741 (17%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F+ L C K++H L+V+G S F++ R++++YA G + +R F+
Sbjct: 79 FNSLFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQ--- 135
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL-GDGFTFPLVIRACKFMGSFRFRF 152
+ WNS++ V NG + A+ + ++ + D +TFP V++AC+ +
Sbjct: 136 RKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD----- 190
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H V ++GFQ +V + LI MY++ G + + LFD + ++ SWN M SG
Sbjct: 191 --GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGL 248
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
N G + +D+ D MR GI + +
Sbjct: 249 IQN-----------------------------------GNAAQALDVLDEMRLEGINMDS 273
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK---------------------- 310
+A +L VCA L +IH +VIK G E +FV
Sbjct: 274 VTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQ 333
Query: 311 ---------NALICVYGKHGDVKVAQNLFSEIE----EKNIVS----------------- 340
N++I Y ++ D A+ F +++ E ++++
Sbjct: 334 MFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNS 393
Query: 341 -----------W--------NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
W NA++ YA+ G+ D A +VF+ + D V+SW+
Sbjct: 394 RSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKD--------VVSWN 445
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVA-NSVTISGLLSVCAESAALNIGREIHGHVVR 440
+I + NG EA++++R M+ + + N T +L+ A AL G IHGH+++
Sbjct: 446 TLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIK 505
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
+++ ++ V L+++Y KCG L + +F Q+ ++ + WN++IS +G++G GE AL
Sbjct: 506 TNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKL 565
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F EM + G KPD V F+++LSACSH+GLV+EG+ F +M +E+ I+P ++HY CMVDLLG
Sbjct: 566 FREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLG 624
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML 620
RAG L+ A D +K+MP+ P+A +WG LL +CR+H N ++ + + ++F + +E G Y+L
Sbjct: 625 RAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVL 684
Query: 621 LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEV 680
LSNIYA G+WE KVR A+ +GLKK G S IEV R++ +F +GN K +
Sbjct: 685 LSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYAE 744
Query: 681 LEELALQMENKGCVPDNDIIL 701
L L +M++ G +PD +L
Sbjct: 745 LRILTAKMKSLGYIPDYSFVL 765
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/674 (32%), Positives = 361/674 (53%), Gaps = 57/674 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLS---IYARFGRLFDARNVFETAPFDC 93
LL CKT+ L+ +H Q+I TG + + + +++L + F L A +VF+T
Sbjct: 8 LLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQ--- 64
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ L+WN++ R + + +ALKLYV M LG+L + +TFP ++++C +F+
Sbjct: 65 EPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKE--- 121
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
GQ +H VL+ GF +++I LI MY + G++ D+ K+ DK ++ +S+ + +G+A
Sbjct: 122 -GQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYA 180
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ A ++F + ++ + V+W + +S +A G +E ++LF M K +
Sbjct: 181 SRGXIESAHKMFDEIPVK----DVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDES 236
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ VLS CA + +G+ +H ++ GF
Sbjct: 237 TMVTVLSACAQSGSIELGRQVHSWINDHGFG----------------------------- 267
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
N+ NALI Y++ G + A +F L D VISW+ +IG +
Sbjct: 268 --XNLKIVNALIDLYSKCGELETACGLFQGLSNKD--------VISWNTLIGGYTHMNLY 317
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHV---VRVSMNKNILVQ 450
+EAL LF+ M + N VT+ +LS CA A++IGR IH ++ ++ N + L +
Sbjct: 318 KEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSL-R 376
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
L++MY KCG +E VF+ + + L +WN+MI G+ M+G A F M + G +
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIE 436
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
PD + FV +LSACSH+G+++ GR IF M R++++ P++EHY CM+DL G +GL +EA
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEK 496
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
++ M MEP+ +W +LL +C+MH N ++ E+ A + + E GSY+LLSNIYA + R
Sbjct: 497 MINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAER 556
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
W + AK R KG+KKV G S IE+ +H F G+ + + +LEE+ + +E
Sbjct: 557 WNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEE 616
Query: 691 KGCVPDNDIILWEM 704
G VPD +L EM
Sbjct: 617 AGFVPDTSEVLQEM 630
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/669 (32%), Positives = 366/669 (54%), Gaps = 58/669 (8%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL-W 100
K+ Q KQ+H Q I T + S A+ V+SIY L +A +F+T KS +L W
Sbjct: 19 KSKSQAKQLHAQFIRT-QSLSHTSASIVISIYTNLKLLHEALLLFKT----LKSPPVLAW 73
Query: 101 NSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
S++R L+ AL +V+MR G D FP V+++C M RF G+ VH
Sbjct: 74 KSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRF----GESVHG 129
Query: 161 HVLQMGFQGNVHIVNELIGMYAK---MGQMSDSFKLFDKV--RVKNYISWNMMFSGFALN 215
++++G +++ N L+ MYAK MG +FD++ R N ++ +
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
F D +F+ M + V++ ++++ +A+ G E+ + + M ++ + +
Sbjct: 190 FGIDSVRRVFEVMP----RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
+ VL + ++ GK IHG+VI+ G + V++ ++L+ +Y K +
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARI------------ 293
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
+++ VFS+L DG ISW++++ + NGR E
Sbjct: 294 -------------------EDSERVFSRLYCRDG--------ISWNSLVAGYVQNGRYNE 326
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
AL LFR+M AKV +V S ++ CA A L++G+++HG+V+R NI + + L++
Sbjct: 327 ALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVD 386
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY KCG ++ +F+++ D ++W ++I G+ ++G G A++ FEEM G KP+ VA
Sbjct: 387 MYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVA 446
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
FVAVL+ACSH GLV+E F+ M + + + ++EHYA + DLLGRAG L+EA + + M
Sbjct: 447 FVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM 506
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
+EP VW TLL+SC +HKN ++AE +A +IF + +E G+Y+L+ N+YA++GRW++ A
Sbjct: 507 CVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMA 566
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
K+R+ + KGL+K SWIE+K K H F SG+ + + E L+ + QME +G V
Sbjct: 567 KLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVA 626
Query: 696 DNDIILWEM 704
D +L ++
Sbjct: 627 DTSGVLHDV 635
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/635 (33%), Positives = 332/635 (52%), Gaps = 28/635 (4%)
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
+R + D P ++C + R + ++ G + + + L+ Y
Sbjct: 11 LRHVSFPPDPHLLPTAFKSCPTLPLARALHAVAEV-------SGLARDPFVASSLLHAYL 63
Query: 183 KMGQMSDSFKLFDKVR--VKNYISWNMMFSGFALNFDCDGALELFKRMELEG-LEPNFVT 239
++G ++ LFD + + + W+ + + A D +GA L + M +G +EPN +T
Sbjct: 64 RLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVIT 123
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGI-EVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
W L+S R GR + + M G+ A ++ LS D+ +G+ +HG+
Sbjct: 124 WNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYA 183
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
+K G V ALI +YGK G +F E ++ S NALI + EA+
Sbjct: 184 VKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEAL 243
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
+F + +D G NV+SW++++ NG+ EA++ FR+MQ NSVTI +
Sbjct: 244 RLFKEF--VDRGV--ELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCV 299
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
L A AAL GR H +R ++ V + L++MY KCG +++ ++F+ + +++
Sbjct: 300 LPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNV 359
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
++WN+MI GY M G NA+ F M++ KPD V F +L+AC+ AGL EGR F
Sbjct: 360 VSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKE 419
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
M E+ + P+MEHYACMV LLGRAG L EA D++ +MP EP+AY+WG+LL SCR+H N D
Sbjct: 420 MHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVD 479
Query: 599 VAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
+AE A ++F L E G+Y+LLSNIYA+ W+ +VR K GLKK G SWIE+K
Sbjct: 480 LAEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIK 539
Query: 659 RKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRA 718
K+HM +G+ + + E + +L +QM G VP D +L + ++
Sbjct: 540 NKVHMLLAGDDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHD---------VEEQEK 590
Query: 719 DNIKSKHRIVGFRNLKLGLRLLLSLRSTNGQLMKN 753
D+I + H L + L L+ + T +++KN
Sbjct: 591 DDILAVHS----EKLAVALGLISTSPGTTLRVIKN 621
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 152/347 (43%), Gaps = 49/347 (14%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFDCKSSSLL------- 99
+Q+H + G A A + ++ +Y + G+ + VF E++ D S + L
Sbjct: 177 QQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRN 236
Query: 100 ------------------------WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
W SI+ V NG A++ + +M+ G + T
Sbjct: 237 AQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTI 296
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
P V+ A + + G+ H L+ GF +V++ + L+ MYAK G++ D+ +FD
Sbjct: 297 PCVLPAFANVAALM----HGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFD 352
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
+ +N +SWN M G+A+ + A+ +F M +P+ VT+T LL++ + G EE
Sbjct: 353 TMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEE 412
Query: 256 TMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF--VIKGGFEDYVFVKNA 312
F +M + G+ E A ++++ GK+ + + FE ++ +
Sbjct: 413 GRHYFKEMHNEYGVSPRMEHYACMVTLLG-----RAGKLDEAYDLISDMPFEPDAYIWGS 467
Query: 313 LICVYGKHGDVKV----AQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
L+ HG+V + A+ LF +E +N ++ L YA + D
Sbjct: 468 LLGSCRVHGNVDLAEVAAEKLF-HLEPENAGNYVLLSNIYASKKMWD 513
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 96/213 (45%), Gaps = 18/213 (8%)
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM 123
++++ ++ +YA+ GR+ DAR +F+T + + WN+++ G NA+ ++ M
Sbjct: 329 YVSSALVDMYAKCGRVKDARIIFDTM---VSRNVVSWNAMIGGYAMYGEAVNAVWMFHSM 385
Query: 124 RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
K D TF ++ AC G + + +HN + G + ++ + +
Sbjct: 386 LKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHN---EYGVSPRMEHYACMVTLLGR 442
Query: 184 MGQMSDSFKLFDKVRVKN--YISWNMMFSGFALNFDCDGALELFKRMELEGLEP----NF 237
G++ +++ L + + YI W + ++ + D L +L LEP N+
Sbjct: 443 AGKLDEAYDLISDMPFEPDAYI-WGSLLGSCRVHGNVD--LAEVAAEKLFHLEPENAGNY 499
Query: 238 VTWTSLLSSHA---RCGRLEETMDLFDMMRKRG 267
V +++ +S R R+ E M + +++G
Sbjct: 500 VLLSNIYASKKMWDRVNRVREMMKDVGLKKEKG 532
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/633 (33%), Positives = 332/633 (52%), Gaps = 97/633 (15%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S +A G + AR+ F+ AP + ++ WN +L V NG E A L+ + V
Sbjct: 137 MISSHANHGLVSLARHYFDLAP---EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDV 193
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ N L+ Y + G+MS
Sbjct: 194 IS-------------------------------------------WNALMSGYVQWGKMS 210
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
++ +LFD++ ++ +SWN+M SG+A D A LF + + TWT+++S +A
Sbjct: 211 EARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR----DVFTWTAVVSGYA 266
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ G LEE +FD M +R
Sbjct: 267 QNGMLEEARRVFDAMPERN---------------------------------------AV 287
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
NA++ Y + + A+ LF+ + +N+ SWN ++T YA+AG+ +EA VF
Sbjct: 288 SWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFD------ 341
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
+M + + +SW+A++ A++ G EE L LF +M N + +LS CA+ AAL
Sbjct: 342 --TMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAAL 399
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
G ++HG ++R V N LL MY KCG +E+ FE++E++D+++WN+MI+GY
Sbjct: 400 ECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGY 459
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
+G G+ AL F+ M KPD + V VL+ACSH+GLV +G F M +F + +
Sbjct: 460 ARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAK 519
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
EHY CM+DLLGRAG L EA D++K+MP EP++ +WG LL + R+H+N ++ + A +IF
Sbjct: 520 PEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIF 579
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L E G Y+LLSNIYA+SG+W DA K+R+ + +G+KKV G SWIEV+ K+H FS+G+
Sbjct: 580 ELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGD 639
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ + + + LE+L ++M+ G V D++L
Sbjct: 640 CVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVL 672
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 177/390 (45%), Gaps = 43/390 (11%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N+ I + + G+++D+ +LF + ++ ++N M +G++ N A LF+ +
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP----R 97
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
P+ ++ +LL + A L + LFD M R +V +V A+H +
Sbjct: 98 PDNYSYNTLLHALAVSSSLADARGLFDEMPVRD--------SVTYNVMISSHANHGLVSL 149
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
E N ++ Y ++G V+ A+ LF+ E +++SWNAL++ Y + G
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKM 209
Query: 355 DEAVEVFSQLEKLD--------GGSMER-------------P--NVISWSAVIGAFASNG 391
EA E+F ++ D G R P +V +W+AV+ +A NG
Sbjct: 210 SEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNG 269
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
EEA +F M N+V+ + +++ + ++ +E+ + +N+ N
Sbjct: 270 MLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRMMDEAKEL----FNMMPCRNVASWN 321
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
+L Y + G LEE VF+ + +KD ++W +M++ Y G E L F EM G
Sbjct: 322 TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWV 381
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
+ AF VLS C+ + G ++ ++R
Sbjct: 382 NRSAFACVLSTCADIAALECGMQLHGRLIR 411
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 158/339 (46%), Gaps = 33/339 (9%)
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G E V N I + + G V A+ LF+ + ++ ++NA++ Y+ G A +
Sbjct: 32 GRLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASL 91
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
F ++ RP+ S++ ++ A A + +A LF +M V +SVT + ++S
Sbjct: 92 FR--------AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMP----VRDSVTYNVMIS 139
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
A +++ R H ++ K+ + NG+L Y++ G +EE +F + D+I+
Sbjct: 140 SHANHGLVSLAR----HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVIS 195
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM- 539
WN+++SGY G A F+ M D V++ ++S + G + E RR+FD
Sbjct: 196 WNALMSGYVQWGKMSEARELFDRMP----GRDVVSWNIMVSGYARRGDMVEARRLFDAAP 251
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
VR+ + +V + G+L+EA + MP E NA W ++ + + D
Sbjct: 252 VRDVFT------WTAVVSGYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRRMMDE 304
Query: 600 AEAMASQIFGLIT-ETTGSYMLLSNIYAASGRWEDAAKV 637
A+ ++F ++ S+ + YA +G E+A V
Sbjct: 305 AK----ELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAV 339
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 107/252 (42%), Gaps = 24/252 (9%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
N S C +L C I L+ Q+H +LI G F+ +L++Y + G + DAR
Sbjct: 382 NRSAFAC---VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDAR 438
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
N FE + + WN+++ +G + AL+++ MR D T V+ AC
Sbjct: 439 NAFEEME---ERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACS 495
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NY 202
G S+ +H+ G +I + + G+++++ L + + +
Sbjct: 496 HSGLVEKGISYFYSMHH---DFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDS 552
Query: 203 ISWNMMFSGFALNFDCD----GALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETM 257
W + ++ + + A ++F+ LEP LLS+ +A G+ +
Sbjct: 553 TMWGALLGASRIHRNPELGRSAAEKIFE------LEPENAGMYVLLSNIYASSGKWRDAR 606
Query: 258 DLFDMMRKRGIE 269
+ MM +RG++
Sbjct: 607 KMRVMMEERGVK 618
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/654 (33%), Positives = 342/654 (52%), Gaps = 70/654 (10%)
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
L WN + ++ NG ++AL ++ M + + +R KF +
Sbjct: 50 LKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKF-----------NL 98
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
N QM + ++ N ++ Y + ++ D+ +LFD + K+ +SWN + SG+A N
Sbjct: 99 ARNLFDQMP-ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGY 157
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD---------------- 261
D A E+F M E N ++W LL+++ GR+EE LF+
Sbjct: 158 VDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGG 213
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY-----------VFVK 310
+RK+ + A + + V ++ + M I G+ GG VF
Sbjct: 214 FVRKKKLG-DARWLFDKMPVRDAISWNTM---ISGYAQGGGLSQARRLFDESPTRDVFTW 269
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
A++ Y ++G + A+ F E+ EKN VS+NA+I Y + D A E+F + +
Sbjct: 270 TAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNIS 329
Query: 371 S-----------------------MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
S M + + +SW+A+I +A +G EEAL++F +++
Sbjct: 330 SWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDG 389
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
N T LS CA+ AAL +G++IHG V++ V N LL MY KCG ++E +
Sbjct: 390 ESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEAN 449
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
FE IE+KD+++WN+M++GY +G G AL FE M AG KPD + V VLSACSH G
Sbjct: 450 DTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTG 509
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
L++ G F M +++ + P +HY CM+DLLGRAG L+EA D+++NMP +P A WG L
Sbjct: 510 LLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGAL 569
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
L + R+H NT++ E A +F + + +G Y+LLSN+YAASGRW DA K+R + G++
Sbjct: 570 LGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQ 629
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
KV G SW+EV+ KIH FS G+ + + + LEEL L+M +G V ++L
Sbjct: 630 KVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVL 683
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 175/404 (43%), Gaps = 73/404 (18%)
Query: 188 SDSFKLFDKVRVKN--YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
S+S +K RVK+ + WN S N CD AL +F M + V++ +++S
Sbjct: 33 SESVTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRR----SSVSYNAMIS 88
Query: 246 SHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
+ R + +LFD M +R +
Sbjct: 89 GYLRNSKFNLARNLFDQMPERDL------------------------------------- 111
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
F N ++ Y ++ + A+ LF + EK++VSWN+L++ YA+ G DEA EVF
Sbjct: 112 --FSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFD--- 166
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
+M N ISW+ ++ A+ NGR EEA LF +++ + + G +
Sbjct: 167 -----NMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFV----RK 217
Query: 426 AALNIGREIHGHV-VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
L R + + VR +++ N ++ Y + G L + +F++ +D+ TW +M
Sbjct: 218 KKLGDARWLFDKMPVRDAISWNTMISG-----YAQGGGLSQARRLFDESPTRDVFTWTAM 272
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
+SGY NG+ + A F+EM E + V++ A+++ ++ R +F+ M
Sbjct: 273 VSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIARELFESMPCR-- 326
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ + M+ G+ G + +A MP + + W ++
Sbjct: 327 ---NISSWNTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAII 366
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 135/308 (43%), Gaps = 53/308 (17%)
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
V N +++ +I+ WN I+++ G CD A+ VF+ +M R + +S++A+I
Sbjct: 36 VTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFN--------TMPRRSSVSYNAMI 87
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISG--------------------------- 417
+ N + A +LF +M + + +V ++G
Sbjct: 88 SGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNS 147
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
LLS A++ ++ RE+ ++ KN + NGLL Y+ G +EE L+FE D
Sbjct: 148 LLSGYAQNGYVDEAREVFDNMPE----KNSISWNGLLAAYVHNGRIEEACLLFESKSDWD 203
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
LI+WN ++ G+ +A F++M D +++ ++S + G +++ RR+FD
Sbjct: 204 LISWNCLMGGFVRKKKLGDARWLFDKMPVR----DAISWNTMISGYAQGGGLSQARRLFD 259
Query: 538 MMVREFRIEPQME--HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
P + + MV + G+L EA MP E N + ++ K
Sbjct: 260 E-------SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP-EKNEVSYNAMIAGYVQTK 311
Query: 596 NTDVAEAM 603
D+A +
Sbjct: 312 KMDIAREL 319
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 39/164 (23%)
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
+ GL++ G F M E+ + P +HY CM+DLLGR L+E
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818
Query: 585 GTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTK 644
G LL + R+H NT++ E A F + + +G +K+R
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSG-----------------ISKMR----DV 857
Query: 645 GLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
G++KV G SW EV+ KIH FS G L + +N+ LEEL L+M
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVGLFLSRERENI-GFLEELDLKM 900
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L C I L KQ+H Q + G F+ +L++Y + G + +A + FE
Sbjct: 397 FGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIE 456
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+ + WN++L +G AL ++ M+ GV D T V+ AC G
Sbjct: 457 ---EKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTG 509
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/558 (36%), Positives = 313/558 (56%), Gaps = 64/558 (11%)
Query: 176 ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
+L+ YA G+ + +FD++ KN + +N+M + N AL +FK M G++P
Sbjct: 76 KLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDP 135
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
+ T+ +L + + G+E + V G IH
Sbjct: 136 DHYTYPCVLKASS----------------------GSEDLWV-------------GMQIH 160
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
V++ G + VFV N LI +YGK G + A + ++ +++VSWN+L+ A G D
Sbjct: 161 AAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFD 220
Query: 356 EAVEVFSQLE----KLDGGSMER--PNV-----------------------ISWSAVIGA 386
+A+EV ++E K D G+M P V +SW+ +I
Sbjct: 221 DALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAV 280
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
+ +N EA+D+F +M+ V ++++I+ +L C + +AL +GR IH +VVR + N
Sbjct: 281 YMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPN 340
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+L++N L++MY KCGCLE VF+Q++ +D+++W SMIS YGMNG G +A++ F M +
Sbjct: 341 LLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQD 400
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
G PD +AFV+VLSACSHAGL++EGR F +M E +I P++EH+ CMVDLLGRAG +
Sbjct: 401 LGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVD 460
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
EA +K MPMEPN VWG LL++CR++ N + A Q+F L E +G Y+LLSNIYA
Sbjct: 461 EAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYA 520
Query: 627 ASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELAL 686
+GRWED VR KTKG+KK+ G S E+ ++H F +G+ K + E L+
Sbjct: 521 KAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVSVG 580
Query: 687 QMENKGCVPDNDIILWEM 704
+M+ G VP+ D L ++
Sbjct: 581 KMKEAGYVPETDSALHDV 598
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 229/455 (50%), Gaps = 49/455 (10%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVT-GANASAFLAARVLSIYARFGRLFDARNVFETAPFDCK 94
+L + I LK++H+++ + +++ L +++ YA G + R++F+ P K
Sbjct: 43 QILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIP---K 99
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
+ + +N ++R V+N LY +AL ++ M G+ D +T+P V++A S
Sbjct: 100 KNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKA----SSGSEDLWV 155
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G +H V+++G NV + N LI MY K G + ++ ++ D++ ++ +SWN + +G A
Sbjct: 156 GMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCAR 215
Query: 215 NFDCDGALELFKRMELEGLEPN---------------------------------FVTWT 241
N D ALE+ K MEL GL+P+ V+W
Sbjct: 216 NGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLANKSLVSWN 275
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
+++ + E +D+F M ++ A +IA VL C DL+A +G+ IH +V++
Sbjct: 276 VMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRK 335
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
+ + ++NALI +Y K G ++ A+ +F +++ +++VSW ++I++Y G +AV +F
Sbjct: 336 RLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLF 395
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM-QLAKVVANSVTISGLLS 420
S+++ L P+ I++ +V+ A + G +E F+ M + K+V ++
Sbjct: 396 SRMQDLG----LNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVD 451
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
+ + ++ E +G + ++ M N V LL+
Sbjct: 452 LLGRAGQVD---EAYGFIKQMPMEPNERVWGALLS 483
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 146/299 (48%), Gaps = 25/299 (8%)
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA-----LITSYAEAGLCDEAV 358
++ V +N + K+ D+K + L S+I + + N L+ +YA G
Sbjct: 32 QNVVLTENLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTR 91
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
+F ++ K NV+ ++ +I ++ +N +AL +F+ M + + T +
Sbjct: 92 HIFDEIPK--------KNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCV 143
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
L + S L +G +IH VVRV ++ N+ V NGL++MY KCGCL E V +Q+ +D+
Sbjct: 144 LKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDV 203
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
++WNS+++G NG ++AL +EM G KPD ++L A ++ L N
Sbjct: 204 VSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVS------ 257
Query: 539 MVREFRIE---PQMEHYACMVDLLGRAGLLQEASDIVKNM---PMEPNAYVWGTLLNSC 591
V+E ++ + + M+ + + EA DI M ++P+A ++L +C
Sbjct: 258 FVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPAC 316
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 103/225 (45%), Gaps = 12/225 (5%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+++H ++ + L ++ +YA+ G L AR VF+ F + W S++
Sbjct: 326 RRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKF---RDVVSWTSMISAY 382
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRFSFGQIVHNHVLQMG 166
NG +A+ L+ +M+ LG+ D F V+ AC G R+ F + +
Sbjct: 383 GMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPR 442
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELF 225
+ V +V +L+G + GQ+ +++ ++ ++ N W + S A + + L
Sbjct: 443 IEHFVCMV-DLLG---RAGQVDEAYGFIKQMPMEPNERVWGALLS--ACRVYSNMIIGLL 496
Query: 226 KRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
+L L P + LLS+ +A+ GR E+ + +M+ +GI+
Sbjct: 497 AADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIK 541
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/633 (33%), Positives = 332/633 (52%), Gaps = 97/633 (15%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S +A G + AR+ F+ AP + ++ WN +L V NG E A L+ + V
Sbjct: 137 MISSHANHGLVSLARHYFDLAP---EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDV 193
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ N L+ Y + G+MS
Sbjct: 194 IS-------------------------------------------WNALMSGYVQWGKMS 210
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
++ +LFD++ ++ +SWN+M SG+A D A LF + + TWT+++S +A
Sbjct: 211 EARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR----DVFTWTAVVSGYA 266
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ G LEE +FD M +R
Sbjct: 267 QNGMLEEARRVFDAMPERN---------------------------------------AV 287
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
NA++ Y + + A+ LF+ + +N+ SWN ++T YA+AG+ +EA VF
Sbjct: 288 SWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFD------ 341
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
+M + + +SW+A++ A++ G EE L LF +M N + +LS CA+ AAL
Sbjct: 342 --TMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAAL 399
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
G ++HG ++R V N LL MY KCG +E+ FE++E++D+++WN+MI+GY
Sbjct: 400 ECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGY 459
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
+G G+ AL F+ M KPD + V VL+ACSH+GLV +G F M +F + +
Sbjct: 460 ARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAK 519
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
EHY CM+DLLGRAG L EA D++K+MP EP++ +WG LL + R+H+N ++ + A +IF
Sbjct: 520 PEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIF 579
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L E G Y+LLSNIYA+SG+W DA K+R+ + +G+KKV G SWIEV+ K+H FS+G+
Sbjct: 580 ELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGD 639
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ + + + LE+L ++M+ G V D++L
Sbjct: 640 CVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVL 672
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 172/390 (44%), Gaps = 43/390 (11%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N+ I + + G+++D+ +LF + ++ ++N M +G++ N A LF+ +
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP----R 97
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
P+ ++ +LL + A L + LFD M R +V +V A+H +
Sbjct: 98 PDNYSYNTLLHALAVSSSLADARGLFDEMPVRD--------SVTYNVMISSHANHGLVSL 149
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
E N ++ Y ++G V+ A+ LF+ E +++SWNAL++ Y + G
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKM 209
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
EA E+F ++ D V+SW+ ++ +A G EA LF + V +
Sbjct: 210 SEARELFDRMPGRD--------VVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAV 261
Query: 415 ISG------------LLSVCAESAALNIGREIHGHVVRVSMN-----------KNILVQN 451
+SG + E A++ + ++ R M+ +N+ N
Sbjct: 262 VSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWN 321
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
+L Y + G LEE VF+ + +KD ++W +M++ Y G E L F EM G
Sbjct: 322 TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWV 381
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
+ AF VLS C+ + G ++ ++R
Sbjct: 382 NRSAFACVLSTCADIAALECGMQLHGRLIR 411
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 158/339 (46%), Gaps = 33/339 (9%)
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G E V N I + + G V A+ LF+ + ++ ++NA++ Y+ G A +
Sbjct: 32 GRLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASL 91
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
F ++ RP+ S++ ++ A A + +A LF +M V +SVT + ++S
Sbjct: 92 FR--------AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMP----VRDSVTYNVMIS 139
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
A +++ R H ++ K+ + NG+L Y++ G +EE +F + D+I+
Sbjct: 140 SHANHGLVSLAR----HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVIS 195
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM- 539
WN+++SGY G A F+ M D V++ ++S + G + E RR+FD
Sbjct: 196 WNALMSGYVQWGKMSEARELFDRMP----GRDVVSWNIMVSGYARRGDMVEARRLFDAAP 251
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
VR+ + +V + G+L+EA + MP E NA W ++ + + D
Sbjct: 252 VRDVFT------WTAVVSGYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRRMMDE 304
Query: 600 AEAMASQIFGLIT-ETTGSYMLLSNIYAASGRWEDAAKV 637
A+ ++F ++ S+ + YA +G E+A V
Sbjct: 305 AK----ELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAV 339
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 107/252 (42%), Gaps = 24/252 (9%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
N S C +L C I L+ Q+H +LI G F+ +L++Y + G + DAR
Sbjct: 382 NRSAFAC---VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDAR 438
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
N FE + + WN+++ +G + AL+++ MR D T V+ AC
Sbjct: 439 NAFEEME---ERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACS 495
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NY 202
G S+ +H+ G +I + + G+++++ L + + +
Sbjct: 496 HSGLVEKGISYFYSMHH---DFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDS 552
Query: 203 ISWNMMFSGFALNFDCD----GALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETM 257
W + ++ + + A ++F+ LEP LLS+ +A G+ +
Sbjct: 553 TMWGALLGASRIHRNPELGRSAAEKIFE------LEPENAGMYVLLSNIYASSGKWRDAR 606
Query: 258 DLFDMMRKRGIE 269
+ MM +RG++
Sbjct: 607 KMRVMMEERGVK 618
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/657 (33%), Positives = 355/657 (54%), Gaps = 51/657 (7%)
Query: 68 RVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG 127
R +S Y R G+ A +VF + S++ +N+++ +SN ++ A K++ KM
Sbjct: 65 RKISAYMRKGQCESALSVFNGMR---RRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRD 121
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
++ ++ + R F Q+ V+ N ++ +A+ G +
Sbjct: 122 LISWNVMLSGYVKNGNLSAA---RALFNQMPEKDVVSW---------NAMLSGFAQNGFV 169
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
++ K+FD++ VKN ISWN + S + N G +E +R+ ++ V+W L+ +
Sbjct: 170 EEARKIFDQMLVKNEISWNGLLSAYVQN----GRIEDARRLFDSKMDWEIVSWNCLMGGY 225
Query: 248 ARCGRLEETMDLFDMMRKR-----GIEVGAEAIAVVLSVCADLAAD-------HMGKVIH 295
R RL++ LFD M R I + A +LS L + ++
Sbjct: 226 VRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVS 285
Query: 296 GFVIKGGFEDYVFV-----------KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
GFV G ++ + NA+I Y + ++ A+ LF ++ +N SWN +
Sbjct: 286 GFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTM 345
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+T YA+ G D+A +F ++ + D ISW+A+I +A +G+ EEAL LF KM+
Sbjct: 346 VTGYAQCGNIDQAKILFDEMPQRD--------CISWAAMISGYAQSGQSEEALHLFIKMK 397
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
+ N ++ LS CAE AAL +G+++HG +V+ + N LL MY KCG +E
Sbjct: 398 RDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIE 457
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
E VFE I +KD+++WN+MI+GY +G G+ ALA FE M + KPD V V VLSACS
Sbjct: 458 EAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACS 516
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
H GLV++G F+ M + + I +HY CM+DLLGRAG L EA +++K+MP P+A W
Sbjct: 517 HTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATW 576
Query: 585 GTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTK 644
G LL + R+H +T++ E A ++F + + +G Y+LLSN+YAASGRW + ++R + K
Sbjct: 577 GALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDK 636
Query: 645 GLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
G+KKV G SW+E++ K H+F+ G+ + + + LEEL L+++ G V ++L
Sbjct: 637 GVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVL 693
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 217/496 (43%), Gaps = 97/496 (19%)
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
++ + V W +S++ R G+ E + +F+ MR+R I+ LS + D K
Sbjct: 56 VDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLS---NNKFDCARK 112
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
V + + N ++ Y K+G++ A+ LF+++ EK++VSWNA+++ +A+ G
Sbjct: 113 VFEKMPDRD-----LISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNG 167
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+EA ++F Q M N ISW+ ++ A+ NGR E+A LF
Sbjct: 168 FVEEARKIFDQ--------MLVKNEISWNGLLSAYVQNGRIEDARRLFDS---------- 209
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
M+ I+ N L+ Y++ L++ +F++
Sbjct: 210 -----------------------------KMDWEIVSWNCLMGGYVRKKRLDDARSLFDR 240
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP--DGVAFVAVLSACSHAGLVN 530
+ +D I+WN MI+GY NGL A FEE+ P D A+ A++S G+++
Sbjct: 241 MPVRDKISWNIMITGYAQNGLLSEARRLFEEL------PIRDVFAWTAMVSGFVQNGMLD 294
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
E RIF+ M + + + M+ ++ +++A ++ MP N W T++
Sbjct: 295 EATRIFEEMPEKNEVS-----WNAMIAGYVQSQQIEKARELFDQMPSR-NTSSWNTMVTG 348
Query: 591 CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG----- 645
N D A+ + + + S+ + + YA SG+ E+A + I K G
Sbjct: 349 YAQCGNIDQAKILFDE---MPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNR 405
Query: 646 ------LKKVAGQSWIEVKRKIH----------MFSSGNSLQSDLKNVCEVLEELALQME 689
L A + +E+ +++H + +GN+L + + C +EE E
Sbjct: 406 SALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLA-MYGKCGSIEEAFDVFE 464
Query: 690 NKGCVPDNDIILWEMM 705
+ + + DI+ W M
Sbjct: 465 D---ITEKDIVSWNTM 477
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 107/254 (42%), Gaps = 29/254 (11%)
Query: 27 NNSLLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
N S L C L C I L KQ+H +L+ G +L++Y + G + +A
Sbjct: 404 NRSALAC---ALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAF 460
Query: 84 NVFETAPFDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
+VFE D ++ WN+++ +G + AL L+ M K+ + D T V+ AC
Sbjct: 461 DVFE----DITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSAC 515
Query: 143 KFMGSFRFRFSFGQIVHNHVLQ-MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR-VK 200
G G N + Q G N +I + + G++ ++ L +
Sbjct: 516 SHTG----LVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYP 571
Query: 201 NYISWNMMFSGFALNFDCD----GALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEE 255
+ +W + ++ D + A ++F+ +EP+ LLS+ +A GR E
Sbjct: 572 DAATWGALLGASRIHGDTELGEKAAEKVFE------MEPDNSGMYVLLSNLYAASGRWRE 625
Query: 256 TMDLFDMMRKRGIE 269
++ MR +G++
Sbjct: 626 VREMRSKMRDKGVK 639
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/649 (32%), Positives = 343/649 (52%), Gaps = 60/649 (9%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS Y++ GR+ + +F+ P + + WNS++ GL ++K Y M K
Sbjct: 81 ILSAYSKLGRVSEMEYLFDAMP---RRDGVSWNSLISGYAGCGLIYQSVKAYNLMLK--- 134
Query: 129 LGDG------FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
DG TF ++ + S R G+ +H HV++ GF V + + L+ MY+
Sbjct: 135 -NDGSFNLNRITFSTLL----ILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYS 189
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
KMG +S + K+FD++ KN + +N + G C G +E KR+ E E + ++WTS
Sbjct: 190 KMGMISCARKVFDELPEKNVVMYNTLIMGL---MRC-GRVEDSKRLFFEMRERDSISWTS 245
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
+++ + G + +D+F M+ +++ VL+ C + A GK +H ++I+
Sbjct: 246 MITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD 305
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
++D +FV +AL+ +Y K ++K A+ +F ++ KN+VSW A++ Y + G +EAV+ FS
Sbjct: 306 YKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFS 365
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
++K G E D T+ ++S C
Sbjct: 366 DMQKY-------------------------GIEPDDF--------------TLGSVISSC 386
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A A+L G + H + + I V N L+ +Y KCG +E+ H +F +I KD +TW
Sbjct: 387 ANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWT 446
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
+++SGY G + FE M+ G KPD V F+ VLSACS AGLV +G +IF+ M+ E
Sbjct: 447 ALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINE 506
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
I P +HY CM+DL RAG ++EA + + MP P+A W TLL+SCR + N D+ +
Sbjct: 507 HGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKW 566
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
A + L T SY+LLS++YAA G+WE+ A++R + KGL+K G SWI+ K ++H
Sbjct: 567 AAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVH 626
Query: 663 MFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVK 711
+FS+ + + LE+L +M +G VPD + +L ++ + +K
Sbjct: 627 VFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIK 675
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 208/383 (54%), Gaps = 14/383 (3%)
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
F+ + +H+H+++ ++N LI YAK+G + + K+FD++ N SWN + S
Sbjct: 25 FTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSA 84
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR--GIE 269
++ LF M + V+W SL+S +A CG + +++ +++M K
Sbjct: 85 YSKLGRVSEMEYLFDAMPRR----DGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFN 140
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
+ + +L + + +G+ IHG V+K GF YVFV + L+ +Y K G + A+ +
Sbjct: 141 LNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKV 200
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
F E+ EKN+V +N LI G +++ +F ++ + D ISW+++I F
Sbjct: 201 FDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDS--------ISWTSMITGFTQ 252
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
NG +A+D+FR+M+L + + T +L+ C AL G+++H +++R NI V
Sbjct: 253 NGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFV 312
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
+ L++MY KC ++ VF+++ K++++W +M+ GYG NG E A+ TF +M + G
Sbjct: 313 ASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGI 372
Query: 510 KPDGVAFVAVLSACSHAGLVNEG 532
+PD +V+S+C++ + EG
Sbjct: 373 EPDDFTLGSVISSCANLASLEEG 395
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 196/445 (44%), Gaps = 102/445 (22%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP----------------- 90
+Q+H ++ G + F+ + ++ +Y++ G + AR VF+ P
Sbjct: 163 RQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRC 222
Query: 91 ----------FDCKS-SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVI 139
F+ + S+ W S++ NGL +A+ ++ +M+ + D +TF V+
Sbjct: 223 GRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVL 282
Query: 140 RACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV 199
AC + + + G+ VH ++++ ++ N+ + + L+ MY K + + +F K+
Sbjct: 283 TACGGVMALQ----EGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTC 338
Query: 200 KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDL 259
KN +SW M G+ N + A++ F M+ G+EP+ T S++SS
Sbjct: 339 KNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISS------------- 385
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
CA+LA+ G H + G ++ V NAL+ +YGK
Sbjct: 386 ----------------------CANLASLEEGAQFHARALTSGLISFITVSNALVTLYGK 423
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL-------EKLD---- 368
G ++ + LF+EI K+ V+W AL++ YA+ G +E + +F + +K+
Sbjct: 424 CGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGV 483
Query: 369 ------GGSMERPNVI---------------SWSAVIGAFASNGRGEEALDLFRKMQLAK 407
G +E+ N I ++ +I F+ GR EEA + KM +
Sbjct: 484 LSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFS- 542
Query: 408 VVANSVTISGLLSVCAESAALNIGR 432
++++ + LLS C ++IG+
Sbjct: 543 --PDAISWATLLSSCRFYGNMDIGK 565
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 158/344 (45%), Gaps = 43/344 (12%)
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
+L +C + K +H +IK F+ N LI Y K G + A +F ++ N
Sbjct: 15 LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
+ SWN ++++Y++ G E +F + + DG +SW+++I +A G +++
Sbjct: 75 LYSWNTILSAYSKLGRVSEMEYLFDAMPRRDG--------VSWNSLISGYAGCGLIYQSV 126
Query: 398 DLFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
+ M N +T S LL + ++ + +GR+IHGHVV+ + V + L++
Sbjct: 127 KAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVD 186
Query: 456 MY-------------------------------MKCGCLEEGHLVFEQIEKKDLITWNSM 484
MY M+CG +E+ +F ++ ++D I+W SM
Sbjct: 187 MYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSM 246
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I+G+ NGL +A+ F EM + D F +VL+AC + EG+++ ++R
Sbjct: 247 ITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRT-D 305
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ + + +VD+ + ++ A + K M + N W +L
Sbjct: 306 YKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCK-NVVSWTAML 348
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 167/378 (44%), Gaps = 56/378 (14%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L C + L KQVH +I T + F+A+ ++ +Y + + A VF+
Sbjct: 278 FGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKK-- 335
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
CK+ + W ++L NG E A+K + M+K G+ D FT VI +C + S
Sbjct: 336 MTCKNV-VSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEE 394
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G H L G + + N L+ +Y K G + DS +LF+++ K+ ++W + S
Sbjct: 395 ----GAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVS 450
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
G+A + + LF+ M GL+P+ VT+ +LS+ +R G +E+ +F+ M
Sbjct: 451 GYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINE---- 506
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
HG V +D+ +I ++ + G ++ A+N
Sbjct: 507 ------------------------HGIV---PIQDHY---TCMIDLFSRAGRIEEARNFI 536
Query: 331 SEIE-EKNIVSWNALITS---YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+++ + +SW L++S Y + A E +L+ N S+ +
Sbjct: 537 NKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDP--------HNTASYVLLSSV 588
Query: 387 FASNGRGEEALDLFRKMQ 404
+A+ G+ EE L + M+
Sbjct: 589 YAAKGKWEEVARLRKDMR 606
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 219/654 (33%), Positives = 342/654 (52%), Gaps = 70/654 (10%)
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
L WN + ++ NG ++AL ++ M + + +R KF +
Sbjct: 50 LKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKF-----------NL 98
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
N QM + ++ N ++ Y + ++ D+ +LFD + K+ +SWN + SG+A N
Sbjct: 99 ARNLFDQMP-ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGY 157
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD---------------- 261
D A E+F M E N ++W LL+++ GR+EE LF+
Sbjct: 158 VDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGG 213
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY-----------VFVK 310
+RK+ + A + + V ++ + M I G+ GG VF
Sbjct: 214 FVRKKKLG-DARWLFDKMPVRDAISWNTM---ISGYAQGGGLSQARRLFDESPTRDVFTW 269
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
A++ Y ++G + A+ F E+ EKN VS+NA+I Y + D A E+F + +
Sbjct: 270 TAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNIS 329
Query: 371 S-----------------------MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
S M + + +SW+A+I +A +G EEAL++F +++
Sbjct: 330 SWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDG 389
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
N T LS CA+ AAL +G++IHG V++ V N LL MY KCG ++E +
Sbjct: 390 ESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEAN 449
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
FE IE+KD+++WN+M++GY +G G AL FE M AG KPD + V VLSACSH G
Sbjct: 450 DTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTG 509
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
L++ G F M +++ + P +HY CM+DLLGRAG L+EA D+++NMP +P A WG L
Sbjct: 510 LLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGAL 569
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
L + R+H NT++ E A +F + + +G Y+LLSN+YAASGRW DA K+R + G++
Sbjct: 570 LGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQ 629
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
KV G SW+EV+ KIH FS G+ + + + LEEL L+M +G V ++L
Sbjct: 630 KVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVL 683
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 170/392 (43%), Gaps = 72/392 (18%)
Query: 188 SDSFKLFDKVRVKN--YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
S+S +K RVK+ + WN S N CD AL +F M + V++ +++S
Sbjct: 33 SESVTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRR----SSVSYNAMIS 88
Query: 246 SHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
+ R + +LFD M +R +
Sbjct: 89 GYLRNSKFNLARNLFDQMPERDL------------------------------------- 111
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
F N ++ Y ++ + A+ LF + EK++VSWN+L++ YA+ G DEA EVF
Sbjct: 112 --FSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFD--- 166
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
+M N ISW+ ++ A+ NGR EEA LF +++ + + G +
Sbjct: 167 -----NMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFV----RK 217
Query: 426 AALNIGREIHGHV-VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
L R + + VR +++ N ++ Y + G L + +F++ +D+ TW +M
Sbjct: 218 KKLGDARWLFDKMPVRDAISWNTMISG-----YAQGGGLSQARRLFDESPTRDVFTWTAM 272
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
+SGY NG+ + A F+EM E + V++ A+++ ++ R +F+ M
Sbjct: 273 VSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIARELFESMPCR-- 326
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
+ + M+ G+ G + +A MP
Sbjct: 327 ---NISSWNTMITGYGQIGDIAQARKFFDMMP 355
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 135/308 (43%), Gaps = 53/308 (17%)
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
V N +++ +I+ WN I+++ G CD A+ VF+ +M R + +S++A+I
Sbjct: 36 VTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFN--------TMPRRSSVSYNAMI 87
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISG--------------------------- 417
+ N + A +LF +M + + +V ++G
Sbjct: 88 SGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNS 147
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
LLS A++ ++ RE+ ++ KN + NGLL Y+ G +EE L+FE D
Sbjct: 148 LLSGYAQNGYVDEAREVFDNMPE----KNSISWNGLLAAYVHNGRIEEACLLFESKSDWD 203
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
LI+WN ++ G+ +A F++M D +++ ++S + G +++ RR+FD
Sbjct: 204 LISWNCLMGGFVRKKKLGDARWLFDKMPVR----DAISWNTMISGYAQGGGLSQARRLFD 259
Query: 538 MMVREFRIEPQME--HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
P + + MV + G+L EA MP E N + ++ K
Sbjct: 260 E-------SPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMP-EKNEVSYNAMIAGYVQTK 311
Query: 596 NTDVAEAM 603
D+A +
Sbjct: 312 KMDIAREL 319
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L C I L KQ+H Q + G F+ +L++Y + G + +A + FE
Sbjct: 397 FGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIE 456
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+ + WN++L +G AL ++ M+ GV D T V+ AC G
Sbjct: 457 ---EKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTG 509
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/669 (31%), Positives = 365/669 (54%), Gaps = 57/669 (8%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLS---IYARFGRLFDARNVFETAPFDCKSSSL 98
+ + L+ +H Q+I TG + + + ++++ + F L A +VFET + + L
Sbjct: 1 QILQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQ---EPNLL 57
Query: 99 LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIV 158
+WN++ R + + +ALKLYV M LG+L + +TFP ++++C +F+ GQ +
Sbjct: 58 IWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKE----GQQI 113
Query: 159 HNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
H HVL++G ++++ LI MY + G++ D+ K+FD+ ++ +S+ + G+A
Sbjct: 114 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYI 173
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
+ A ++F + ++ + V+W +++S +A G +E ++LF M K + + V
Sbjct: 174 ENAQKMFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 229
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
+S CA + +G+ +H ++ +D+ F N I
Sbjct: 230 VSACAQSGSIELGRQVHSWI-----DDHGFGSNLKIV----------------------- 261
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
NALI Y++ G + A +F L D VISW+ +IG + +EAL
Sbjct: 262 ---NALIDLYSKCGELETACGLFEGLPYKD--------VISWNTLIGGYTHMNLYKEALL 310
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHV---VRVSMNKNILVQNGLLN 455
LF++M + N VT+ +L CA A++IGR IH ++ ++ N + L + L++
Sbjct: 311 LFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSL-RTSLID 369
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY KCG +E H VF I K L +WN+MI G+ M+G + + F M + G +PD +
Sbjct: 370 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDIT 429
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
FV +LSACSH+G+++ GR IF M +++++ P++EHY CM+DLLG +GL +EA +++ M
Sbjct: 430 FVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTM 489
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
MEP+ +W +LL +C+MH N ++ E+ A + + E GSY+LLSNIYA +GRW + A
Sbjct: 490 EMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVA 549
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
R KG+KKV G S IE+ +H F G+ + + +LEE+ + +E G VP
Sbjct: 550 NTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVP 609
Query: 696 DNDIILWEM 704
D +L EM
Sbjct: 610 DTSEVLQEM 618
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 152/324 (46%), Gaps = 18/324 (5%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
Q +I +QVH+ + G ++ + ++ +Y++ G L A +FE P+ +
Sbjct: 235 QSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPY---KDVIS 291
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN+++ LY+ AL L+ +M + G + T ++ AC +G+ G+ +H
Sbjct: 292 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA----IDIGRWIH 347
Query: 160 NHVLQ--MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
++ + G + LI MYAK G + + ++F+ + K+ SWN M GFA++
Sbjct: 348 VYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGR 407
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIA 276
D + ++F RM G+EP+ +T+ LLS+ + G L+ +F M + + E
Sbjct: 408 ADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYG 467
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV----AQNLFSE 332
++ + L + K + E + +L+ HG+V++ AQNL +
Sbjct: 468 CMIDL---LGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLI-K 523
Query: 333 IEEKNIVSWNALITSYAEAGLCDE 356
IE +N S+ L YA AG +E
Sbjct: 524 IEPENPGSYVLLSNIYATAGRWNE 547
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/633 (33%), Positives = 332/633 (52%), Gaps = 97/633 (15%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S +A G + AR+ F+ AP + ++ WN +L V NG E A
Sbjct: 137 MISSHANHGLVSLARHYFDLAP---EKDAVSWNGMLAAYVRNGRVEEA------------ 181
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
G F R + I N L+ Y + G+MS
Sbjct: 182 ----------------RGLFNSRTEWDAIS---------------WNALMSGYVQWGKMS 210
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
++ +LFD++ ++ +SWN+M SG+A D A LF + + TWT+++S +A
Sbjct: 211 EARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR----DVFTWTAVVSGYA 266
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ G LEE +FD M +R
Sbjct: 267 QNGMLEEARRVFDAMPERN---------------------------------------AV 287
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
NA++ Y + + A+ LF+ + +N+ SWN ++T YA+AG+ +EA VF
Sbjct: 288 SWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFD------ 341
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
+M + + +SW+A++ A++ G EE L LF +M N + +LS CA+ AAL
Sbjct: 342 --TMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAAL 399
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
G ++HG ++R V N LL MY KCG +E+ FE++E++D+++WN+MI+GY
Sbjct: 400 ECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGY 459
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
+G G+ AL F+ M KPD + V VL+ACSH+GLV +G F M +F + +
Sbjct: 460 ARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAK 519
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
EHY CM+DLLGRAG L EA D++K+MP EP++ +WG LL + R+H+N ++ + A +IF
Sbjct: 520 PEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIF 579
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L E G Y+LLSNIYA+SG+W DA K+R+ + +G+KKV G SWIEV+ K+H FS+G+
Sbjct: 580 ELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGD 639
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ + + + LE+L ++M+ G V D++L
Sbjct: 640 CVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVL 672
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 176/390 (45%), Gaps = 43/390 (11%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N+ I + + G+++D+ +LF + ++ ++N M +G++ N A LF+ +
Sbjct: 42 NKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP----R 97
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
P+ ++ +LL + A L + LFD M R +V +V A+H +
Sbjct: 98 PDNYSYNTLLHALAVSSSLADARGLFDEMPVRD--------SVTYNVMISSHANHGLVSL 149
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
E N ++ Y ++G V+ A+ LF+ E + +SWNAL++ Y + G
Sbjct: 150 ARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKM 209
Query: 355 DEAVEVFSQLEKLD--------GGSMER-------------P--NVISWSAVIGAFASNG 391
EA E+F ++ D G R P +V +W+AV+ +A NG
Sbjct: 210 SEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNG 269
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
EEA +F M N+V+ + +++ + ++ +E+ + +N+ N
Sbjct: 270 MLEEARRVFDAMP----ERNAVSWNAMVAAYIQRRMMDEAKEL----FNMMPCRNVASWN 321
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
+L Y + G LEE VF+ + +KD ++W +M++ Y G E L F EM G
Sbjct: 322 TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWV 381
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
+ AF VLS C+ + G ++ ++R
Sbjct: 382 NRSAFACVLSTCADIAALECGMQLHGRLIR 411
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 157/339 (46%), Gaps = 33/339 (9%)
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G E V N I + + G V A+ LF+ + ++ ++NA++ Y+ G A +
Sbjct: 32 GRLEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASL 91
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
F ++ RP+ S++ ++ A A + +A LF +M V +SVT + ++S
Sbjct: 92 FR--------AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMP----VRDSVTYNVMIS 139
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
A +++ R H ++ K+ + NG+L Y++ G +EE +F + D I+
Sbjct: 140 SHANHGLVSLAR----HYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAIS 195
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM- 539
WN+++SGY G A F+ M D V++ ++S + G + E RR+FD
Sbjct: 196 WNALMSGYVQWGKMSEARELFDRMP----GRDVVSWNIMVSGYARRGDMVEARRLFDAAP 251
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
VR+ + +V + G+L+EA + MP E NA W ++ + + D
Sbjct: 252 VRDVFT------WTAVVSGYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYIQRRMMDE 304
Query: 600 AEAMASQIFGLIT-ETTGSYMLLSNIYAASGRWEDAAKV 637
A+ ++F ++ S+ + YA +G E+A V
Sbjct: 305 AK----ELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAV 339
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 107/252 (42%), Gaps = 24/252 (9%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
N S C +L C I L+ Q+H +LI G F+ +L++Y + G + DAR
Sbjct: 382 NRSAFAC---VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDAR 438
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
N FE + + WN+++ +G + AL+++ MR D T V+ AC
Sbjct: 439 NAFEEME---ERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACS 495
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NY 202
G S+ +H+ G +I + + G+++++ L + + +
Sbjct: 496 HSGLVEKGISYFYSMHH---DFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDS 552
Query: 203 ISWNMMFSGFALNFDCD----GALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETM 257
W + ++ + + A ++F+ LEP LLS+ +A G+ +
Sbjct: 553 TMWGALLGASRIHRNPELGRSAAEKIFE------LEPENAGMYVLLSNIYASSGKWRDAR 606
Query: 258 DLFDMMRKRGIE 269
+ MM +RG++
Sbjct: 607 KMRVMMEERGVK 618
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/623 (32%), Positives = 344/623 (55%), Gaps = 51/623 (8%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
YA+ + A +F++ P + + WN ++ +G AL + V M GV D
Sbjct: 235 YAKSHGVDHALEIFKSMP---ERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDS 291
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
T+ + AC + S + G+ +H V++ + ++ + ++ +YAK G ++ +
Sbjct: 292 TTYTSSLTACARLSSLEW----GKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKR 347
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+F +R +N +S WT L+ + G
Sbjct: 348 VFSSLRDRNSVS-----------------------------------WTVLIGGFLQYGC 372
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
E+++LF+ MR + V A+A ++S C + +G +H +K G V V N+
Sbjct: 373 FSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNS 432
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
LI +Y K G+++ A+ +F+ + E++IVSW +IT+Y++ G +A E F M
Sbjct: 433 LISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDD--------M 484
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK-VVANSVTISGLLSVCAESAALNIG 431
NVI+W+A++GA+ +G E+ L ++ M K V+ + VT L CA+ A +G
Sbjct: 485 STRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLG 544
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
+I GH V+V + + V N ++ MY KCG + E F+ + +KDL++WN+MI+GY +
Sbjct: 545 DQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQH 604
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G+G+ A+ F++++ G KPD +++VAVLS CSH+GLV EG+ FDMM R+ I P +EH
Sbjct: 605 GMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEH 664
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
++CMVDLLGRAG L EA +++ MPM+P A VWG LL++C+ H N D+AE A +F L
Sbjct: 665 FSCMVDLLGRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLD 724
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
+ +G YMLL+ +YA +G+ +D+A+VR + KG+KK G SW+EV ++H+F + +
Sbjct: 725 SPGSGGYMLLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSH 784
Query: 672 SDLKNVCEVLEELALQMENKGCV 694
+ + E L+EL ++ + G V
Sbjct: 785 PQVIAIREKLDELMEKIAHLGYV 807
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 225/485 (46%), Gaps = 57/485 (11%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG-VLGD 131
YA+ G L DA +F P +S WN+I+ +G + NAL ++V MR+ G L +
Sbjct: 102 YAKLGSLSDAVELFGRMPTRDVAS---WNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPN 158
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
FTF V+++C +G ++ + Q + + L+ M + G M +
Sbjct: 159 AFTFGCVMKSCGALGWHEVALQLLGLLS----KFDSQDDPDVQTALVDMLVRCGAMDFAS 214
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
K F +++ I N M G+A + D ALE+FK M E + V+W ++S+ ++ G
Sbjct: 215 KQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMP----ERDVVSWNMVISALSKSG 270
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
R+ E +D+ M +G+ + L+ CA L++ GK +H VI+ +V +
Sbjct: 271 RVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVAS 330
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
A++ +Y K G K A+ +FS + ++N VSW LI + + G E+VE+F+Q+
Sbjct: 331 AMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQM------- 383
Query: 372 MERPNVISWSAVIGAFASNGRGE-EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
R E A+D F ++ L+S C + + +
Sbjct: 384 --------------------RAELMAVDQF-------------ALATLISGCCNTMDICL 410
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
G ++H ++ + ++V N L++MY KCG L+ L+F + ++D+++W MI+ Y
Sbjct: 411 GSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQ 470
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
G A F++M + + A+L A G +G +++ M+ E + P
Sbjct: 471 VGNIAKAREFFDDMSTRNV----ITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWV 526
Query: 551 HYACM 555
Y +
Sbjct: 527 TYVTL 531
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 215/454 (47%), Gaps = 20/454 (4%)
Query: 139 IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF-DKV 197
+R+C R + + +H+ ++ +G V + N L+ Y G +SD+ L D++
Sbjct: 32 LRSC----GARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
N I+ N+M +G+A A+ELF RM + +W +++S + + G+ +
Sbjct: 88 TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTR----DVASWNTIMSGYYQSGQFLNAL 143
Query: 258 DLFDMMRKRGIEV-GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
D+F MR+ G + A V+ C L + + G + K +D V+ AL+ +
Sbjct: 144 DIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDM 203
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
+ G + A FS I+ I+ N+++ YA++ D A+E+F SM +
Sbjct: 204 LVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFK--------SMPERD 255
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
V+SW+ VI A + +GR EALD+ M V +S T + L+ CA ++L G+++H
Sbjct: 256 VVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHV 315
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
V+R + + V + ++ +Y KCGC +E VF + ++ ++W +I G+ G
Sbjct: 316 QVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSE 375
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
++ F +M D A ++S C + + G ++ + ++ + + ++
Sbjct: 376 SVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNS-LI 434
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
+ + G LQ A +++ N E + W ++ +
Sbjct: 435 SMYAKCGNLQNA-ELIFNFMAERDIVSWTGMITA 467
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 192/387 (49%), Gaps = 22/387 (5%)
Query: 19 RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGR 78
RP S TY +SL C + ++ KQ+H Q+I + ++A+ ++ +YA+ G
Sbjct: 288 RPDST-TYTSSLTAC-----ARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGC 341
Query: 79 LFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLV 138
+A+ VF + +S+ W ++ + G + +++L+ +MR + D F +
Sbjct: 342 FKEAKRVFSSLR---DRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATL 398
Query: 139 IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR 198
I C G +H+ L+ G V + N LI MYAK G + ++ +F+ +
Sbjct: 399 ISGC----CNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFNFMA 454
Query: 199 VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD 258
++ +SW M + ++ + A E F M N +TW ++L ++ + G E+ +
Sbjct: 455 ERDIVSWTGMITAYSQVGNIAKAREFFDDMSTR----NVITWNAMLGAYIQHGAEEDGLK 510
Query: 259 LF-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
++ DM+ ++ + + CAD+ A+ +G I G +K G V NA+I +Y
Sbjct: 511 MYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMY 570
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
K G + A+ F + K++VSWNA+IT Y++ G+ +A+E+F + L+ G+ +P+
Sbjct: 571 SKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDI--LNKGA--KPDY 626
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQ 404
IS+ AV+ + +G EE F M+
Sbjct: 627 ISYVAVLSGCSHSGLVEEGKFYFDMMK 653
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 168/388 (43%), Gaps = 56/388 (14%)
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF-S 331
+A+A L C +A + +H +I G VF++N L+ Y G + A+NL
Sbjct: 26 QALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRD 85
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
EI E N+++ N ++ YA+ G +AVE+F G M +V SW+ ++ + +G
Sbjct: 86 EITEPNVITHNIMMNGYAKLGSLSDAVELF--------GRMPTRDVASWNTIMSGYYQSG 137
Query: 392 RGEEALDLFRKM-QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
+ ALD+F M Q + N+ T ++ C + ++ G + + + VQ
Sbjct: 138 QFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQ 197
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE---- 506
L++M ++CG ++ F +I+ +I NSM+ GY + ++AL F+ M E
Sbjct: 198 TALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVV 257
Query: 507 ---------------------------AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
G +PD + + L+AC+ + G+++ +
Sbjct: 258 SWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQV 317
Query: 540 VREFRIEPQMEHY--ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK-- 595
+R P ++ Y + MV+L + G +EA + ++ + N+ W L+ +
Sbjct: 318 IRNL---PHIDPYVASAMVELYAKCGCFKEAKRVFSSL-RDRNSVSWTVLIGGFLQYGCF 373
Query: 596 -------NTDVAEAMASQIFGLITETTG 616
N AE MA F L T +G
Sbjct: 374 SESVELFNQMRAELMAVDQFALATLISG 401
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 160/326 (49%), Gaps = 30/326 (9%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM-RKLG 127
+++ Y++ G + AR F+ + + WN++L + +G E+ LK+Y M +
Sbjct: 464 MITAYSQVGNIAKAREFFDDMS---TRNVITWNAMLGAYIQHGAEEDGLKMYSDMLTEKD 520
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
V+ D T+ + R C +G+ + G + H +++G + +VN +I MY+K G++
Sbjct: 521 VIPDWVTYVTLFRGCADIGANKL----GDQIIGHTVKVGLILDTSVVNAVITMYSKCGRI 576
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
S++ K FD + K+ +SWN M +G++ + A+E+F + +G +P+++++ ++LS
Sbjct: 577 SEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGC 636
Query: 248 ARCGRLEETMDLFDMM-RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY 306
+ G +EE FDMM R I G E + ++ D +G+ H K ++
Sbjct: 637 SHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMV--------DLLGRAGHLIEAKNLIDEM 688
Query: 307 VF-----VKNALICVYGKHGDVKVAQ----NLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
V AL+ HG+ +A+ +LF +++ + L YA+AG D++
Sbjct: 689 PMKPTAEVWGALLSACKTHGNNDLAELAAKHLF-DLDSPGSGGYMLLAKMYADAGKSDDS 747
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAV 383
+V + D G + P SW V
Sbjct: 748 AQVRKLMR--DKGIKKSPGY-SWMEV 770
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 34/194 (17%)
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE--- 465
+A + ++ L C +AL R +H ++ V + + +QN LL+ Y+ CG L +
Sbjct: 22 MAITQALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARN 81
Query: 466 ------------------------GHL-----VFEQIEKKDLITWNSMISGYGMNGLGEN 496
G L +F ++ +D+ +WN+++SGY +G N
Sbjct: 82 LLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLN 141
Query: 497 ALATFEEMIEAGFK-PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
AL F M + G P+ F V+ +C G ++ ++ + F + + +
Sbjct: 142 ALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSK-FDSQDDPDVQTAL 200
Query: 556 VDLLGRAGLLQEAS 569
VD+L R G + AS
Sbjct: 201 VDMLVRCGAMDFAS 214
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/704 (30%), Positives = 363/704 (51%), Gaps = 93/704 (13%)
Query: 3 HSLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQ--LKQVHNQLIVTGAN 60
+S L P S P F ++ +SLLD ++H+ L Q+H QL+V+G
Sbjct: 50 YSSLPLPLDHSDYIPYSGFDFDSFFSSLLD---------HSVHKRHLNQIHAQLVVSGLV 100
Query: 61 ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY 120
S FL + ++ G + AR VF+ P + S LWN+I+R S+ + +A+++Y
Sbjct: 101 ESGFLVTKFVNASWNIGEIGYARKVFDEFP---EPSVFLWNAIIRGYSSHNFFGDAIEMY 157
Query: 121 VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
+M+ GV DGFT P V++AC + G+ VH + ++GF+ +V + N L+ +
Sbjct: 158 SRMQASGVNPDGFTLPCVLKACSGVPVLEV----GKRVHGQIFRLGFESDVFVQNGLVAL 213
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
YAK G++ + +F+ + +N +SW M SG+ N AL +F +M ++P+++
Sbjct: 214 YAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIAL 273
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
S+L ++ LE+ GK IHG V+K
Sbjct: 274 VSVLRAYTDVEDLEQ-----------------------------------GKSIHGCVVK 298
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G E + +L +Y K G V VA++ F ++E N++ WNA+I+ YA+ G +EAV
Sbjct: 299 MGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAV-- 356
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
LF++M + +S+T+ +
Sbjct: 357 -------------------------------------GLFQEMISKNIRTDSITVRSAIL 379
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
CA+ +L++ + + ++ + ++ V L++M+ KCG ++ VF++ KD++
Sbjct: 380 ACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVV 439
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
W++MI GYG++G G++A+ F M +AG P+ V FV +L+AC+H+GLV EG +F M
Sbjct: 440 WSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM- 498
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
+ + IE + +HYAC+VDLLGR+G L EA D + MP+EP VWG LL +C+++++ +
Sbjct: 499 KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLG 558
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
E A Q+F L TG Y+ LSN+YA+S W+ AKVRI + KGL K G S IE+ K
Sbjct: 559 EYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGK 618
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ F G+ K + E LE L +++ G +P + +L ++
Sbjct: 619 LQAFRVGDKSHPRFKEIFEELESLERRLKEAGFIPHIESVLHDL 662
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 229/797 (28%), Positives = 388/797 (48%), Gaps = 116/797 (14%)
Query: 17 PSRPFSIITYNNSLLDCFDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIY 73
P PFS + F H+ Q+C K + KQ H ++I+T + F+ ++ +Y
Sbjct: 28 PISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMY 87
Query: 74 ARFGRLFDARNVFETAP--------------------------FDC--KSSSLLWNSILR 105
+ L A VF+ P FD + + WNS++
Sbjct: 88 IKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLIS 147
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
+ NG + + ++++M ++G + D TF +V+++C + G +H ++M
Sbjct: 148 GYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDH----GGGIQIHGLAVKM 203
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
GF +V + L+ MYAK ++ S + F + KN++SW+ + +G N D G LELF
Sbjct: 204 GFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELF 263
Query: 226 KRMELEG-------------------------------LEPNF----VTWTSLLSSHARC 250
K M+ G L+ +F V T+ L + +C
Sbjct: 264 KEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKC 323
Query: 251 GRLEETMDLFDMM-----------------RKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
L + LF+ + +G+ + +++ CA + D G
Sbjct: 324 NNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQ 383
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
+HG +K + + V NA++ +YGK G + A +F E+ ++ VSWNA+I ++ + G
Sbjct: 384 VHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGN 443
Query: 354 CDEAVEVFSQ---------LEKLDG----------GSMERP----------NVISWSAVI 384
++ + +F L+ G G ME+ V+SW+A+I
Sbjct: 444 EEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAII 503
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
F+ + EEA F KM V ++ T + +L CA + +G++IH +++ +
Sbjct: 504 SGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQ 563
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
+ + + L++MY KCG +++ L+FE+ +D +TWN+M+ GY +GLGE AL FE M
Sbjct: 564 SDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYM 623
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
KP+ F+AVL AC H GLV +G F M+ + ++PQ+EHY+C+VD++GR+G
Sbjct: 624 QLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQ 683
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNI 624
+ +A ++++ MP E +A +W TLL+ C++H N +VAE A I L E + +Y+LLSNI
Sbjct: 684 VSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNI 743
Query: 625 YAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
YA +G W + K+R + GLKK G SWIE+K ++H F G+ K + E L+ L
Sbjct: 744 YANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVL 803
Query: 685 ALQMENKGCVPDNDIIL 701
+M+ G +PD D IL
Sbjct: 804 TDEMKWVGYMPDTDFIL 820
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 231/800 (28%), Positives = 393/800 (49%), Gaps = 144/800 (18%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L++C + L +QVH +I + ++++Y + G + +AR V++ +
Sbjct: 29 MLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSY-M 87
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + WN+++ + G E ALKL +M++ G+ D T + +CK G+ +
Sbjct: 88 ERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEW--- 144
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H +Q G +V + N ++ MYAK G + ++ ++FDK+ K+ +SW + G+A
Sbjct: 145 -GREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYA 203
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSS--------------------------- 246
+ A E+F++ME EG+ PN +T+ S+L++
Sbjct: 204 DCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTA 263
Query: 247 --------HARCGRLEE-----------------TM--------------DLFDMMRKRG 267
+A+CG ++ TM ++++ M++ G
Sbjct: 264 VGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREG 323
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
+ ++L+ C + AA H GK IH V K GF + V+NALI +Y + G +K A+
Sbjct: 324 VMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDAR 383
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+F ++ K+++SW A+I A++G EA+ V+ ++++ + PN +++++++ A
Sbjct: 384 LVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQ----AGVEPNRVTYTSILNAC 439
Query: 388 ASN-----------------------------------GRGEEALDLFRKMQLAKVVANS 412
+S G ++A +F +M +VA +
Sbjct: 440 SSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYN 499
Query: 413 VTISG-------------------------------LLSVCAESAALNIGREIHGHVVRV 441
I G +L+ CA S +L REIH V +
Sbjct: 500 AMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKG 559
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
+ V N L++ Y KCG + +VFE++ K+++I+WN++I G +G G++AL F
Sbjct: 560 GFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLF 619
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
E M G KPD V FV++LSACSHAGL+ EGRR F M ++F I P +EHY CMVDLLGR
Sbjct: 620 ERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGR 679
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLL 621
AG L EA ++K MP + N +WG LL +CR+H N VAE A L + Y+ L
Sbjct: 680 AGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVAL 739
Query: 622 SNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVL 681
S++YAA+G W+ AAK+R + +G+ K G+SWI+V K+H F + + + + L
Sbjct: 740 SHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAEL 799
Query: 682 EELALQMENKGCVPDNDIIL 701
+ L M+ KG VPD ++
Sbjct: 800 DRLTHAMKMKGYVPDTRSVM 819
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 5/183 (2%)
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
A+D+ + +Q NS +L C E L GR++H H+++ + N L+N
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 456 MYMKCGCLEEGHLVFEQIE--KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
MY++CG +EE V++++ ++ + +WN+M+ GY G E AL +M + G PD
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 514 VAFVAVLSACSHAGLVNEGRRI-FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
++ LS+C G + GR I F M + ++ + C++++ + G ++EA ++
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVAN--CILNMYAKCGSIEEAREVF 184
Query: 573 KNM 575
M
Sbjct: 185 DKM 187
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/547 (35%), Positives = 304/547 (55%), Gaps = 36/547 (6%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
VH +L++G + +++N+++ G + S ++F + + N +N M G LN
Sbjct: 29 VHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLN-- 86
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
+E+++++ MRK G+ +
Sbjct: 87 ---------------------------------DSFQESIEIYHSMRKEGLSPDSFTFPF 113
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
+L CA L +G +HG V+K G E FV +L+ +YGK G + A +F +I EKN
Sbjct: 114 LLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKN 173
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
+ +W A+I+ Y G C EA+++F + + G +E+ +++SWS++I +ASNG +EAL
Sbjct: 174 VAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEK-DIVSWSSMIQGYASNGLPKEAL 232
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
DLF KM + + G+L CA AL +G + R N ++ L++MY
Sbjct: 233 DLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMY 292
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG ++ VF + KKD++ WN+ ISG M+G + A F +M ++G +PDG FV
Sbjct: 293 AKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFV 352
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
+L AC+HAGLV+EGR+ F+ M R F + P++EHY CMVDLLGRAG L EA +VK+MPM
Sbjct: 353 GLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPM 412
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
E NA VWG LL CR+H++T + E + Q+ L +G+Y+LLSNIY+AS +WEDAAK+
Sbjct: 413 EANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKI 472
Query: 638 RISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
R +G+KKV G SWIEV +H F G++ + + L EL ++ G VP
Sbjct: 473 RSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYAKLGELVKDLKASGYVPTT 532
Query: 698 DIILWEM 704
D +L+++
Sbjct: 533 DYVLFDI 539
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 206/456 (45%), Gaps = 51/456 (11%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
L Q ++ LK VH L+ G + ++L +VL FG + +F + +
Sbjct: 16 LFQGFNSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTK---EPN 72
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
L+N+++ V N ++ ++++Y MRK G+ D FTFP +++AC + G
Sbjct: 73 IFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARL----LDSKLGI 128
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H V++ G + + + L+ +Y K G + ++FK+FD + KN +W + SG+
Sbjct: 129 KLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVG 188
Query: 217 DCDGALELFKRM--ELEG-LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
C A+++F+R +G LE + V+W+S++ +A G +E +DLF M G
Sbjct: 189 KCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCY 248
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
A+ VL CA L A +G + + F + ALI +Y K G + A +F +
Sbjct: 249 AMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGM 308
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
+K+IV WNA I+ A +G A +F Q+EK
Sbjct: 309 RKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEK--------------------------- 341
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV-SMNKNILVQNG 452
+ + + T GLL C + ++ GR+ + RV ++ I
Sbjct: 342 ------------SGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGC 389
Query: 453 LLNMYMKCGCLEEGH-LVFEQIEKKDLITWNSMISG 487
++++ + G L+E H LV + + I W +++ G
Sbjct: 390 MVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGG 425
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 98/222 (44%), Gaps = 10/222 (4%)
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
+ +H ++R+ ++++ + N +L G H +F Q ++ ++ +N+MI G +N
Sbjct: 27 KHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLN 86
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
+ ++ + M + G PD F +L AC+ G ++ ++V+ E
Sbjct: 87 DSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKA-GCESDAFV 145
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN------SCRMHKNTDVAEAMAS 605
+V L G+ G + A + ++P E N W +++ CR + D+ S
Sbjct: 146 NTSLVSLYGKCGFIDNAFKVFDDIP-EKNVAAWTAIISGYIGVGKCR--EAIDMFRRACS 202
Query: 606 QIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
G++ + S+ + YA++G ++A + +G +
Sbjct: 203 VFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFR 244
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 222/701 (31%), Positives = 357/701 (50%), Gaps = 85/701 (12%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F LL C ++ + VH +LI T F+ R++ +Y + G L AR VF+
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86
Query: 91 ------FDCKSSSLL----------------------WNSILRVNVSNGLYENALKLYVK 122
F+ S+L+ WNS++ + +E AL +V+
Sbjct: 87 ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M + + + ++F + AC + + G +H + + + +V + + LI Y+
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKL----GAQIHGLISKSKYSLDVFMGSGLIDFYS 202
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K G + + ++FD + E N V+W
Sbjct: 203 KCGLVGCARRVFDGME-----------------------------------EKNVVSWNC 227
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
L++ + + G E ++ F M + G + +A V+S CA LAA G IH V+K
Sbjct: 228 LITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSD 287
Query: 303 -FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
F + + + NAL+ +Y K G V A+ +F + +N VS +++ YA++ A +F
Sbjct: 288 KFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMF 347
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
+ +++ D ++SW+A+I + NG EEAL LFR ++ V T LL+
Sbjct: 348 ATIKQKD--------IVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNA 399
Query: 422 CAESAALNIGREIHGHVVRVSM------NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
A A L +GR+ H HVV+ +I V N L++MYMKCG +EEG VFE + +
Sbjct: 400 SANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVE 459
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
KD ++WN+MI GY NG G AL F++M+E+G KPD V + L ACSHAGLV EGRR
Sbjct: 460 KDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRY 519
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
F M +E + P +HY CMVDLLGRAG L+EA D++++MP +P+A VW +LL++C++H+
Sbjct: 520 FFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHR 579
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
N + + +A +IF + ++G Y+LL+N+Y+ GRW DA VR + +G+ K G SWI
Sbjct: 580 NITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWI 639
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
+++ +H+F + K + +L+ L M G VPD
Sbjct: 640 DIQSNVHVFMVKDKRHPQKKEIYSILKLLTKHMRQAGYVPD 680
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 124/248 (50%), Gaps = 22/248 (8%)
Query: 28 NSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
N+L+D + +C +++ + V +++ V A + + +S YA+ + AR++F
Sbjct: 297 NALVD----MYAKCGRVNEARCVFDRMPVRNAVSETTM----VSGYAKSASVKAARSMFA 348
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
T + + WN+++ NG E AL L+ +++ V +TF ++ A +
Sbjct: 349 TIK---QKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLAD 405
Query: 148 FRFRFSFGQIVHNHVLQMGF------QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
G+ H+HV++ GF + ++ + N LI MY K G + + ++F+ + K+
Sbjct: 406 LEL----GRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKD 461
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD-LF 260
++SWN M G+A N ALELF++M G +P+ VT L + + G +EE F
Sbjct: 462 HVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFF 521
Query: 261 DMMRKRGI 268
M ++ G+
Sbjct: 522 SMTKEHGL 529
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 39/236 (16%)
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
+S + LL +C + + R +HG +++ + + +QN L+++Y KCG L+ V
Sbjct: 22 TDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKV 81
Query: 470 FEQIE-------------------------------KKDLITWNSMISGYGMNGLGENAL 498
F+++ +KD +WNSMI+G+ + E AL
Sbjct: 82 FDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEAL 141
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR-EFRIEPQMEHYACMVD 557
F M F + +F + LSACS + G +I ++ + ++ ++ M + ++D
Sbjct: 142 DWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMG--SGLID 199
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
+ GL+ A + M E N W L+ +C +N EA+ + FG +TE
Sbjct: 200 FYSKCGLVGCARRVFDGME-EKNVVSWNCLI-TC-YEQNGPAIEAL--EAFGRMTE 250
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 221/701 (31%), Positives = 360/701 (51%), Gaps = 78/701 (11%)
Query: 3 HSLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANAS 62
L H PH NP+ P + S D T+ Q KQ+H +I T
Sbjct: 24 QQLQHHPHSTLKFNPT-PLQTPPTSPSQHDL--------STLEQTKQIHAHIIKTH---- 70
Query: 63 AFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVK 122
F A + + N F + S S WN ++ NAL +Y +
Sbjct: 71 -FHHALQIPL-----------NDFPSG----LSPSAQWNFVITSYTKRNQPRNALNVYAQ 114
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
+RK+ D F P V++AC G + G+ +H VL+ G +V + N L+ MY
Sbjct: 115 LRKMDFEVDNFMAPSVLKAC---GQVSWT-QLGKEIHGFVLKKGLDRDVFVGNALMLMYG 170
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
+ + + +FDK+ +E + V+W++
Sbjct: 171 ECACVEYARLVFDKM-----------------------------------MERDVVSWST 195
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
++ S +R + ++L M + A+ ++++ AD A MGK +H +VI+
Sbjct: 196 MIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNS 255
Query: 303 FEDYVFVKN--ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
+++ V AL+ +Y K G + +A+ LF+ + +K +VSW A+I + +EA +
Sbjct: 256 NNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARAL 315
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
F + D V+ W+A++ A+A ++A +LF +M+ + V VTI LLS
Sbjct: 316 FDSTQNRD--------VMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLS 367
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
+CA + AL++G+ +H ++ + + + ++ L++MY KCG + +F + +D+
Sbjct: 368 LCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICM 427
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WN++I+G+ M+G GE AL F EM G KP+ + F+ +L ACSHAGLV EG+++F+ MV
Sbjct: 428 WNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMV 487
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
F + PQ+EHY CMVDLLGRAGLL EA +++K+MP++PN VWG L+ +CR+HKN +
Sbjct: 488 HTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLG 547
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
E A+Q+ + E G +L+SNIYAA+ RW DAA VR + KT G+KK G S IEV
Sbjct: 548 ELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGT 607
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+H F G+ ++ + E+L E+ ++ G VPD +L
Sbjct: 608 VHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVL 648
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/653 (32%), Positives = 341/653 (52%), Gaps = 93/653 (14%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
+H L+++H QL+ G + A+++LS YA RL +R VF + P + +++ L N++
Sbjct: 37 LHHLQELHAQLLKHGLHLDPVAASKLLSSYALHRRLPASRGVFASFP-NPHATTFLPNTL 95
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
LR N L A+ ++ M D FT+ +I+A G R VH+HV+
Sbjct: 96 LRAYALNALPREAVAVFSAMPHR----DSFTYSFLIKALSSAGVAPLR-----AVHSHVV 146
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
++G + ++ N LI Y+K G SD+ K+F+ E
Sbjct: 147 KLGSIEDTYVGNALIDAYSKNGGFSDASKVFE---------------------------E 179
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
+ +R + V+W S +++ R G +E +FD M
Sbjct: 180 MPRR--------DVVSWNSAMAAMVRQGEVEGARRMFDEM-------------------- 211
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
E N L+ Y K GDV+ A LF + E+N+VSW+
Sbjct: 212 -------------------LEKDTVSWNTLLDGYTKAGDVEEAFKLFQCMPERNVVSWST 252
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+++ Y + G + A +F + M N+++W+ ++ A A NG EEA LF +M
Sbjct: 253 VVSGYCKKGDMEMARVIFDK--------MPTKNLVTWTIMVSACAQNGLVEEAGKLFTQM 304
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
+ A V + + +L+ CAES +L +G+ IH +V + ++ V N L++M+ KCGC+
Sbjct: 305 KEASVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCI 364
Query: 464 EEGHLVFE-QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
VF+ +I +KD ++WN++I G+ M+G G+ AL F +M GF PD V + VLSA
Sbjct: 365 NRADYVFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSA 424
Query: 523 CSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAY 582
C+H G V EGRR F M R++ + PQ+EHY CM+DLLGR GL++EA D++K+MP +PN
Sbjct: 425 CTHMGFVEEGRRYFANMERDYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEV 484
Query: 583 VWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAK 642
+WG+LL++CR+HKN + AE +++ L G+Y +LS+IYA +G+W D AK R+ K
Sbjct: 485 IWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARMQMK 544
Query: 643 TKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
G +K +G SWIE+ H F+ G+ D + E+++ L+ ++ CVP
Sbjct: 545 GTGSQKSSGSSWIELDEAFHEFTVGDRKHPDSDQISEMVDRLSSHAKDVDCVP 597
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/712 (29%), Positives = 370/712 (51%), Gaps = 54/712 (7%)
Query: 21 FSIITYNNSLLD--CFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYAR 75
F ++ ++ LD F + + C + + +Q+H +I + +++ ++ +Y +
Sbjct: 148 FQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGK 207
Query: 76 FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL--------- 126
G L DA+ V P + S+ WNS++ +NG+ AL+ KM+ L
Sbjct: 208 CGSLDDAKKVLVKMP---ERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVS 264
Query: 127 ---------------------------GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
G++ + T V+ AC + R G+ +H
Sbjct: 265 WSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQ----RLDLGKQLH 320
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
++ + F N +VN L+ +Y + G M + K+F K VKN +S N M G+ + D
Sbjct: 321 GYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVS 380
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVV 278
A ELF M++ G+E ++W S++S + R +E +F +M+ + GIE + + V
Sbjct: 381 KAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSV 440
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
L+ CAD + GK IH I G + FV AL+ +Y K D+ AQ F E+ EK++
Sbjct: 441 LTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDV 500
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
+WNALI+ Y + ++ + LEK+ G PN+ +W++++ N + + +
Sbjct: 501 PTWNALISGYTRS---NQIERIQYLLEKMKGDGY-HPNIYTWNSILAGLVENRQLDLTMQ 556
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
LF +MQ++K+ + T+ +L C+ A L G++ H H ++ + ++ + L++MY
Sbjct: 557 LFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYA 616
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
KCG L+ L +++I +L++ N+M++ M+G GE ++ F+ M+ GF PD V F++
Sbjct: 617 KCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLS 676
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
VLS+C H G V G FD+M + ++P ++HY MVDLL R+G L EA +++K MP+E
Sbjct: 677 VLSSCVHVGSVETGCEFFDLM-GYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVE 735
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
++ +WG LL C H N ++ E A ++ L +G+Y+LL+N++A + RW D A+VR
Sbjct: 736 CDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAYARRWTDLARVR 795
Query: 639 ISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
K +G+ K G SWIE K +IH F + + + + L+ LAL M+
Sbjct: 796 GMMKDRGMHKSPGCSWIEDKNEIHSFLACDRSHKRAEEIYATLDYLALHMKT 847
Score = 274 bits (701), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 187/628 (29%), Positives = 308/628 (49%), Gaps = 56/628 (8%)
Query: 7 HQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLA 66
HQP S FS++ + +L CK KQVH I TG +A F+
Sbjct: 38 HQPVNISQQKNRSNFSLLDNKPLNTSKYASVLDSCKCPKLGKQVHAHTIKTGFDADGFID 97
Query: 67 ARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL 126
++L +YAR G L DA +FET P S W +IL V + +GL+E A L+ ++
Sbjct: 98 TKLLQMYARCGLLKDADFLFETMPMRNLHS---WKAILSVYLDHGLFEEAFLLFQVLQFD 154
Query: 127 GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ 186
GV D F FPLV +AC +GS G+ +H V++ F N+++ N LI MY K G
Sbjct: 155 GVELDFFVFPLVFKACSGLGSVE----LGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGS 210
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME-LEGLEPNFVTWTSLLS 245
+ D+ K+ K+ ++ ++WN + + A N ALE ++M+ L+ PN V+W++++
Sbjct: 211 LDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIG 270
Query: 246 SHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
A+ G EE +++ M+ G+ A+ +A VL CA L +GK +HG++ + F
Sbjct: 271 GFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFIS 330
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
V NAL+ VY + GD+ A +F + KN++S N +I Y E+G +A E+F ++
Sbjct: 331 NPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMD 390
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK-VVANSVTISGLLSVCAE 424
L +ER +ISW+++I + N +EA +F+ M + + + +S T+ +L+ CA+
Sbjct: 391 VL---GIER-GLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACAD 446
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
+ +L G+EIH + + + V L+ MY KC L + F+++ +KD+ TWN++
Sbjct: 447 TISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNAL 506
Query: 485 ISGYG------------------------------MNGLGEN-----ALATFEEMIEAGF 509
ISGY + GL EN + F EM +
Sbjct: 507 ISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKL 566
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL---Q 566
+PD +L ACS + G++ ++ + + A +VD+ + G L Q
Sbjct: 567 RPDIYTVGIILPACSRLATLERGKQAHAHSIK-CGYDTDVHIGAALVDMYAKCGSLKYAQ 625
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMH 594
A D + N PN +L +C MH
Sbjct: 626 LAYDRISN----PNLVSHNAMLTACAMH 649
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 118/239 (49%), Gaps = 8/239 (3%)
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
+ S SV +G+++H H ++ + + + LL MY +CG L++ +FE
Sbjct: 59 PLNTSKYASVLDSCKCPKLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFE 118
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
+ ++L +W +++S Y +GL E A F+ + G + D F V ACS G V
Sbjct: 119 TMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVEL 178
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
GR++ ++++ FR + ++D+ G+ G L +A ++ MP E ++ W +++ +C
Sbjct: 179 GRQLHGLVIK-FRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMP-ERDSVTWNSVITAC 236
Query: 592 R----MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
+++ + E M S + + + S ++ +A +G E+A ++ + +GL
Sbjct: 237 AANGMVYEALEFLEKMKSLDYSMPNVVSWSAVI--GGFAQNGYDEEAIEMLFRMQVEGL 293
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/633 (33%), Positives = 332/633 (52%), Gaps = 97/633 (15%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S +A G + AR+ F+ AP + ++ WN +L V NG E A L+ + V
Sbjct: 12 MISSHANHGLVSLARHYFDLAP---EKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDV 68
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ N L+ Y + G+MS
Sbjct: 69 IS-------------------------------------------WNALMSGYVQWGKMS 85
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
++ +LFD++ ++ +SWN+M SG+A D A LF + + TWT+++S +A
Sbjct: 86 EARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR----DVFTWTAVVSGYA 141
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ G LEE +FD M +R
Sbjct: 142 QNGMLEEARRVFDAMPERN---------------------------------------AV 162
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
NA++ Y + + A+ LF+ + +N+ SWN ++T YA+AG+ +EA VF
Sbjct: 163 SWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAVFD------ 216
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
+M + + +SW+A++ A++ G EE L LF +M N + +LS CA+ AAL
Sbjct: 217 --TMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAAL 274
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
G ++HG ++R V N LL MY KCG +E+ FE++E++D+++WN+MI+GY
Sbjct: 275 ECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGY 334
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
+G G+ AL F+ M KPD + V VL+ACSH+GLV +G F M +F + +
Sbjct: 335 ARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAK 394
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
EHY CM+DLLGRAG L EA D++K+MP EP++ +WG LL + R+H+N ++ + A +IF
Sbjct: 395 PEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIF 454
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L E G Y+LLSNIYA+SG+W DA K+R+ + +G+KKV G SWIEV+ K+H FS+G+
Sbjct: 455 ELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGD 514
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ + + + LE+L ++M+ G V D++L
Sbjct: 515 CVHPEKEKIYAFLEDLDMRMKKAGYVSATDMVL 547
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 57/278 (20%)
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
N +I + HG V +A++ F EK+ VSWN ++ +Y G +EA +F+ + D
Sbjct: 10 NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWD-- 67
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
VISW+A++ + G+ EA +LF +M VV+ ++ +SG
Sbjct: 68 ------VISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSG------------- 108
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
Y + G + E +F+ +D+ TW +++SGY
Sbjct: 109 --------------------------YARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQ 142
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
NG+ E A F+ M E + V++ A+++A +++E + +F+MM +
Sbjct: 143 NGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMMPCR-----NVA 193
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ M+ +AG+L+EA + MP + +A W +L
Sbjct: 194 SWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSWAAML 230
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 107/252 (42%), Gaps = 24/252 (9%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
N S C +L C I L+ Q+H +LI G F+ +L++Y + G + DAR
Sbjct: 257 NRSAFAC---VLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDAR 313
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
N FE + + WN+++ +G + AL+++ MR D T V+ AC
Sbjct: 314 NAFEEME---ERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACS 370
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NY 202
G S+ +H+ G +I + + G+++++ L + + +
Sbjct: 371 HSGLVEKGISYFYSMHH---DFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDS 427
Query: 203 ISWNMMFSGFALNFDCD----GALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETM 257
W + ++ + + A ++F+ LEP LLS+ +A G+ +
Sbjct: 428 TMWGALLGASRIHRNPELGRSAAEKIFE------LEPENAGMYVLLSNIYASSGKWRDAR 481
Query: 258 DLFDMMRKRGIE 269
+ MM +RG++
Sbjct: 482 KMRVMMEERGVK 493
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 92/226 (40%), Gaps = 41/226 (18%)
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
VR S+ N+++ + + G + F+ +KD ++WN M++ Y NG E A
Sbjct: 3 VRDSVTYNVMISS-----HANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEAR 57
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV------------------ 540
F E D +++ A++S G ++E R +FD M
Sbjct: 58 GLFNSRTEW----DVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRG 113
Query: 541 ------REFRIEPQMEHYACMVDLLGRA--GLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
R F P + + + G A G+L+EA + MP E NA W ++ +
Sbjct: 114 DMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMP-ERNAVSWNAMVAAYI 172
Query: 593 MHKNTDVAEAMASQIFGLIT-ETTGSYMLLSNIYAASGRWEDAAKV 637
+ D A+ ++F ++ S+ + YA +G E+A V
Sbjct: 173 QRRMMDEAK----ELFNMMPCRNVASWNTMLTGYAQAGMLEEAKAV 214
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/635 (32%), Positives = 346/635 (54%), Gaps = 48/635 (7%)
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+ F L A +VFET + + L+WN++LR + S+ +AL++YV+M LG L +
Sbjct: 7 VSPHFDGLPYAISVFETIQ---EPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPN 63
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
++FP ++++C +F G+ +H VL++G + ++ LI MYA+ G + D+
Sbjct: 64 SYSFPFLLKSCAKSKAFEE----GRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDAR 119
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
K+FD ++ +S + +G+A D A ++F + E + V+W ++++ + G
Sbjct: 120 KVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEI----TERDVVSWNAMITGYVENG 175
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
R EE ++LF M + + + V+S CA + +G+ +H +V +
Sbjct: 176 RYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWV------------D 223
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
+G +K+ NALI Y++ G + A +F L D
Sbjct: 224 DDDDDHGFSSSLKIV---------------NALIDLYSKCGDVETAFGLFEGLSCKD--- 265
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
V+SW+ +IG + +EAL LF++M + N VT+ +L CA A++IG
Sbjct: 266 -----VVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIG 320
Query: 432 REIHGHVVRV--SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
R IH ++ + + ++ L++MY KCG +E H VF + + L +WN+MI G+
Sbjct: 321 RWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFA 380
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
M+G A F M +PD + FV +LSACSH+GL++ GR+IF M +++ + P++
Sbjct: 381 MHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKL 440
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
EHY CM+DLLG +GL +EA +++ MPMEP+ +W +LL +C+ H N ++AE+ A ++
Sbjct: 441 EHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIK 500
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
+ E +GSY+LLSNIYA +GRWED A+VR KG+KKV G S IEV +H F G+
Sbjct: 501 IEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDK 560
Query: 670 LQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
L + + +LEE+ +Q+E G PD +L EM
Sbjct: 561 LHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEM 595
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 147/577 (25%), Positives = 235/577 (40%), Gaps = 154/577 (26%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F LL+ C K + +Q+H Q++ G ++ ++S+YAR G L DAR VF+ +
Sbjct: 67 FPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASS 126
Query: 91 F-DCKSSSLL---------------------------WNSILRVNVSNGLYENALKLYVK 122
D S + L WN+++ V NG YE AL+L+ +
Sbjct: 127 HRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKE 186
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM----GFQGNVHIVNELI 178
M + V D T V+ AC GS G+ VH+ V GF ++ IVN LI
Sbjct: 187 MMRTNVRPDEGTLVSVVSACAQSGSIE----LGRQVHSWVDDDDDDHGFSSSLKIVNALI 242
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
+Y+K G + +F LF+ + K+ +SWN + G+ AL LF+ M G PN V
Sbjct: 243 DLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDV 302
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
T LLS VL CA L A +G+ IH ++
Sbjct: 303 T---LLS--------------------------------VLPACAHLGAIDIGRWIHVYI 327
Query: 299 IK--GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
K G + ++ +LI +Y K GD++ A +F+ + +++ SWNA+I +A G +
Sbjct: 328 DKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANA 387
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
A ++FS +M+ +V + +T
Sbjct: 388 AFDLFS---------------------------------------RMRGNRVEPDDITFV 408
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
GLLS C+ S L++GR+I K++ L GC
Sbjct: 409 GLLSACSHSGLLDLGRQIF---------KSMTQDYNLTPKLEHYGC-------------- 445
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEA-GFKPDGVAFVAVLSACSHAGLVNEGRRI 535
MI G +GL + A EEMI +PDGV + ++L AC G +
Sbjct: 446 -------MIDLLGHSGLFKEA----EEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESF 494
Query: 536 FDMMVREFRIEPQME-HYACMVDLLGRAGLLQEASDI 571
++ +IEP+ Y + ++ AG ++ + +
Sbjct: 495 AQKLI---KIEPENSGSYVLLSNIYATAGRWEDVARV 528
>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
[Oryza sativa Japonica Group]
gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
Length = 836
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/728 (29%), Positives = 364/728 (50%), Gaps = 42/728 (5%)
Query: 20 PFSIITYNNSLLDCFDHLLQQCKTIHQL-----KQVHNQLIVTGANASAFLAARVLSIYA 74
P+S + L DC D L T H++ Q+H+ + TG + + ++ + A
Sbjct: 41 PYSAGVLVSLLRDCAD--LHGDDTDHRVARRLAPQLHSLAVRTGLSRDPRVTCALVDLLA 98
Query: 75 RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFT 134
R GR + A D ++LWN + + ++ A+ ++ +M+ GV DG+T
Sbjct: 99 RLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYT 158
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
V+ AC G+ R G+ VH + L++ + + L GMYA+ ++ + ++
Sbjct: 159 CARVLHACGRAGALRE----GRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVL 214
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
D + + + WN + + A D ALEL RM G EPN TW ++LS +R GR
Sbjct: 215 DAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDR 274
Query: 255 ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
E + + M K+G+ A ++ +L A+ G IH F ++ E V+ AL+
Sbjct: 275 EALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALV 334
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK-------- 366
+Y K G + AQ + +E +N+ +WN+L+ YA AG D A+E+ ++K
Sbjct: 335 DMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDIT 394
Query: 367 -----LDGGSME------------------RPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+ G SM PNV+SW+++I NG E++ +M
Sbjct: 395 TWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEM 454
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
Q V + VT+S LL CA A G+E+H +R + + +++V L++MY K G L
Sbjct: 455 QKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSL 514
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
++FE I++K+L+ N+M++G ++G G A+ F +M +G KPD + F A+L+AC
Sbjct: 515 VSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTAC 574
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
GLV EG FD M ++ ++P E+YACMVDLL R G L EA D ++ P++P A
Sbjct: 575 RSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASH 634
Query: 584 WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKT 643
WG LL C +H N +AE A +F L + +Y+L+ N+Y +++A ++ + K
Sbjct: 635 WGALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKA 694
Query: 644 KGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWE 703
+G+ G SWI++++ IH+F + + E L L Q++ G VPD I +
Sbjct: 695 RGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYN 754
Query: 704 MMGKKNVK 711
+ ++ K
Sbjct: 755 VQEEEKEK 762
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/730 (29%), Positives = 368/730 (50%), Gaps = 112/730 (15%)
Query: 4 SLLHQPHQFSPSNPSRPFSIIT-------------------YNNSLLDCFDHLLQQCK-- 42
+L QP + P +P PF +NN+ DC + + K
Sbjct: 20 ALCPQPFKIRPLDPP-PFRFPASTLKFLETHYSSSLNLTTHFNNNKDDCNESTFKPDKFY 78
Query: 43 ------TIHQ--LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCK 94
+IH+ L Q++ +L+VTG FL A++++ + G + AR +F+ P
Sbjct: 79 ASLIDDSIHKTHLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFP---D 135
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
LWN+I+R +G + +A+++Y +M+ V DGF+FP V++AC + +
Sbjct: 136 PDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEM---- 191
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ VH + + GF+ +V + N L+ +YAK G++ + +F ++ + +SW + SG+A
Sbjct: 192 GRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQ 251
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
N AL +F M + P+++ S+L ++ LE
Sbjct: 252 NGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEH------------------- 292
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
GK IHG VIK G E + +L +Y K G V VA+ F+++E
Sbjct: 293 ----------------GKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVE 336
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
+++ WNA+I+ Y + G +EA+E+F
Sbjct: 337 NPSLIFWNAMISGYVKNGYAEEAIELF--------------------------------- 363
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
R M+ + +S+T++ ++ CA+ +L + R + ++ +++V L+
Sbjct: 364 ------RLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLI 417
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+ Y KCG ++ VF++I KD++ W++M+ GYG++G G ++ F M +AG P+ V
Sbjct: 418 DTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDV 477
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
FV +L+AC ++GLV EG +F M R++ IEP+ +HYAC+VDLLGRAG L A + V N
Sbjct: 478 TFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMN 536
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP+EP VWG LL++C++H++ + E A ++F L TG Y+ LSN+YA+S W+
Sbjct: 537 MPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCV 596
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
AKVR+ + KGL K G S IE+ K+ F +G+ K + E +E+L +++ G V
Sbjct: 597 AKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFV 656
Query: 695 PDNDIILWEM 704
P + +L ++
Sbjct: 657 PHTESVLHDL 666
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 226/706 (32%), Positives = 365/706 (51%), Gaps = 106/706 (15%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFDCKSSSLLWNSILRVN 107
+VH+ + T L +LS++ RFG L +A VF + A D S WN ++
Sbjct: 115 RVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFS----WNVLVGGY 170
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
G ++ AL LY +M +G+ D +TFP V+R C + + G+ VH HV++ GF
Sbjct: 171 AKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPD----LARGREVHLHVIRYGF 226
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ +V +VN LI MY K G + + +FD++ ++ ISWN M SG+ N C L LF
Sbjct: 227 ESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFM 286
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M ++P+ +T TS V+S C L
Sbjct: 287 MREFFVDPDLMTMTS-----------------------------------VISACEALGD 311
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+ +G+ +HG+VIK GF V V N+LI ++ G A+ +FS++E K++VSW A+I+
Sbjct: 312 ERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISG 371
Query: 348 YAEAGLCDEAVEVFSQLEK----------------------LDGGSM-----ERPNVISW 380
Y + GL ++AVE ++ +E LD G M +R + S+
Sbjct: 372 YEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSY 431
Query: 381 ----SAVIGAFASNGRGEEALDLFRKMQLAKVVA-------------------------- 410
+++I ++ ++AL++F ++ V++
Sbjct: 432 VIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMIL 491
Query: 411 ----NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
NSVT+ +LS CA AL+ G+EIH H +R + + + N LL+MY++CG +E
Sbjct: 492 SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPA 551
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
F E KD+ +WN +++GY G G A+ F +MIE+ PD + F ++L ACS +
Sbjct: 552 WNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRS 610
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
G+V +G F+ M +F I P ++HYA +VDLLGRAG L++A + +K MP++P+ +WG
Sbjct: 611 GMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGA 670
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LLN+CR+++N ++ E A IF + T++ G Y+LL N+YA SG+W++ A+VR + L
Sbjct: 671 LLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRL 730
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
G SW+EV ++H F +G+ +K + VLE +ME G
Sbjct: 731 TVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATG 776
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 32/284 (11%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C I L K++H + TG FL +L +Y R GR+ A N F + D
Sbjct: 503 VLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDV 562
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
S WN +L G A++L+ KM + V D TF ++ AC G
Sbjct: 563 AS----WNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLE 618
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
+ + + + + N+ ++ + + G++ D+++ K+ + + G
Sbjct: 619 YFESMEH---KFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDP----DPAIWGAL 671
Query: 214 LNFDCDGALELFKRMELEGLEPNFV---------TWTSLLSSHARCGRLEETMDLFDMMR 264
LN A +++ +EL L + + L + +A G+ +E + +MR
Sbjct: 672 LN-----ACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMR 726
Query: 265 KRGIEV--GAEAIAVVLSVCADLAADHMGKVIHGF--VIKGGFE 304
+ + V G + V V A L D I V++G +E
Sbjct: 727 ENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYE 770
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/657 (33%), Positives = 354/657 (53%), Gaps = 51/657 (7%)
Query: 68 RVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG 127
R +S Y R G+ A +VF + S++ +N+++ +SN ++ A K++ KM
Sbjct: 65 RKISAYMRKGQCESALSVFNGMR---RRSTVTYNAMISGYLSNNKFDCARKVFEKMPDRD 121
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
++ ++ + R F Q+ V+ N ++ +A+ G +
Sbjct: 122 LISWNVMLSGYVKNGNLSAA---RALFNQMPEKDVVSW---------NAMLSGFAQNGFV 169
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
++ K+FD++ VKN ISWN + S + N G +E +R+ ++ V+W L+ +
Sbjct: 170 EEARKIFDQMLVKNEISWNGLLSAYVQN----GRIEDARRLFDSKMDWEIVSWNCLMGGY 225
Query: 248 ARCGRLEETMDLFDMMRKR-----GIEVGAEAIAVVLSVCADLAAD-------HMGKVIH 295
R RL++ LFD M R I + A +LS L + ++
Sbjct: 226 VRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEELPIRDVFAWTAMVS 285
Query: 296 GFVIKGGFEDYVFV-----------KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
GFV G ++ + NA+I Y + ++ A+ LF ++ +N SWN +
Sbjct: 286 GFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSRNTSSWNTM 345
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+T YA+ G D+A +F ++ + D ISW+A+I +A +G+ EEAL LF KM+
Sbjct: 346 VTGYAQCGNIDQAKILFDEMPQRD--------CISWAAMISGYAQSGQSEEALHLFIKMK 397
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
+ N ++ LS CAE AAL +G+++HG +V+ + N LL MY KCG +E
Sbjct: 398 RDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIE 457
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
E VFE I +KD+++WN+MI+GY +G G+ ALA FE M + KPD V V VLSACS
Sbjct: 458 EAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACS 516
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
H G V++G F+ M + + I +HY CM+DLLGRAG L EA +++K+MP P+A W
Sbjct: 517 HTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATW 576
Query: 585 GTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTK 644
G LL + R+H +T++ E A ++F + + +G Y+LLSN+YAASGRW + ++R + K
Sbjct: 577 GALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDK 636
Query: 645 GLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
G+KKV G SW+E++ K H+F+ G+ + + + LEEL L+++ G V ++L
Sbjct: 637 GVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVL 693
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 217/496 (43%), Gaps = 97/496 (19%)
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
++ + V W +S++ R G+ E + +F+ MR+R I+ LS + D K
Sbjct: 56 VDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLS---NNKFDCARK 112
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
V + + N ++ Y K+G++ A+ LF+++ EK++VSWNA+++ +A+ G
Sbjct: 113 VFEKMPDRD-----LISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNG 167
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+EA ++F Q M N ISW+ ++ A+ NGR E+A LF
Sbjct: 168 FVEEARKIFDQ--------MLVKNEISWNGLLSAYVQNGRIEDARRLFDS---------- 209
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
M+ I+ N L+ Y++ L++ +F++
Sbjct: 210 -----------------------------KMDWEIVSWNCLMGGYVRKKRLDDARSLFDR 240
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP--DGVAFVAVLSACSHAGLVN 530
+ +D I+WN MI+GY NGL A FEE+ P D A+ A++S G+++
Sbjct: 241 MPVRDKISWNIMITGYAQNGLLSEARRLFEEL------PIRDVFAWTAMVSGFVQNGMLD 294
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
E RIF+ M + + + M+ ++ +++A ++ MP N W T++
Sbjct: 295 EATRIFEEMPEKNEVS-----WNAMIAGYVQSQQIEKARELFDQMPSR-NTSSWNTMVTG 348
Query: 591 CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG----- 645
N D A+ + + + S+ + + YA SG+ E+A + I K G
Sbjct: 349 YAQCGNIDQAKILFDE---MPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNR 405
Query: 646 ------LKKVAGQSWIEVKRKIH----------MFSSGNSLQSDLKNVCEVLEELALQME 689
L A + +E+ +++H + +GN+L + + C +EE E
Sbjct: 406 SALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLA-MYGKCGSIEEAFDVFE 464
Query: 690 NKGCVPDNDIILWEMM 705
+ + + DI+ W M
Sbjct: 465 D---ITEKDIVSWNTM 477
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 29/254 (11%)
Query: 27 NNSLLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
N S L C L C I L KQ+H +L+ G +L++Y + G + +A
Sbjct: 404 NRSALAC---ALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAF 460
Query: 84 NVFETAPFDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
+VFE D ++ WN+++ +G + AL L+ M K+ + D T V+ AC
Sbjct: 461 DVFE----DITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSAC 515
Query: 143 KFMGSFRFRFS-FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR-VK 200
G F + N+ G N +I + + G++ ++ L +
Sbjct: 516 SHTGFVDKGMEYFNSMYQNY----GITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYP 571
Query: 201 NYISWNMMFSGFALNFDCD----GALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEE 255
+ +W + ++ D + A ++F+ +EP+ LLS+ +A GR E
Sbjct: 572 DAATWGALLGASRIHGDTELGEKAAEKVFE------MEPDNSGMYVLLSNLYAASGRWRE 625
Query: 256 TMDLFDMMRKRGIE 269
++ MR +G++
Sbjct: 626 VREMRSKMRDKGVK 639
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 233/759 (30%), Positives = 368/759 (48%), Gaps = 120/759 (15%)
Query: 20 PFSIITY---NNSLLDCFDH--LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLS 71
P ++ Y S +D +D+ LLQ C L KQVH ++ G + ++ +L
Sbjct: 28 PADVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLK 87
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+Y G + +AR +F+ F KS + WN ++ GL + A L+ M++ G+ D
Sbjct: 88 LYVHCGSVNEARRLFDK--FSNKSV-VSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPD 144
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
FTF ++ AC + ++G+ VH V++ G N + N LI MYAK G + D+
Sbjct: 145 KFTFVSILSACSSPAAL----NWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDAR 200
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS----- 246
++FD + ++ +SW + +A + +L+ + M EG+ P+ +T+ ++LS+
Sbjct: 201 RVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLA 260
Query: 247 --------HA----------------------RCGRLEETMDLFDMMRKRGI-----EVG 271
HA +CG +++ ++F+ + R + +G
Sbjct: 261 ALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIG 320
Query: 272 A-------------------EAIA-------VVLSVCADLAADHMGKVIHGFVIKGGFED 305
E +A +LS CA GK IH +K G
Sbjct: 321 GLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVS 380
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
V NALI +Y K G +K A+ +F + ++++VSW AL+ YA+ C + VE FS
Sbjct: 381 DVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYAD---CGQVVESFST-- 435
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
F+KM V AN +T +L C+
Sbjct: 436 ----------------------------------FKKMLQQGVEANKITYMCVLKACSNP 461
Query: 426 AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMI 485
AL G+EIH VV+ + ++ V N L++MY KCG +E+ V E + +D++TWN++I
Sbjct: 462 VALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLI 521
Query: 486 SGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRI 545
G NG G AL FE M +P+ FV V+SAC LV EGRR F M +++ I
Sbjct: 522 GGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGI 581
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMAS 605
P +HYACMVD+L RAG L EA D++ MP +P+A +WG LL +CR H N ++ E A
Sbjct: 582 VPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAE 641
Query: 606 QIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFS 665
Q L + G+Y+ LS IYAA+G W D AK+R K +G+KK G+SWIEV ++H F
Sbjct: 642 QCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFV 701
Query: 666 SGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+G+ + + LE L Q+++ G VPD ++ ++
Sbjct: 702 AGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDL 740
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 217/501 (43%), Gaps = 65/501 (12%)
Query: 19 RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGR 78
RP S ITY N L C + + KQ+H Q++ + ++ ++ + +Y + G
Sbjct: 243 RP-SRITYMNVLSAC-----GSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGA 296
Query: 79 LFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLV 138
+ DAR VFE P + WN+++ V +G E A ++ +M K V D T+ +
Sbjct: 297 VKDAREVFECLP---NRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAI 353
Query: 139 IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR 198
+ AC G + G+ +H ++ G +V N LI MY+K G M D+ ++FD++
Sbjct: 354 LSACARPGG----LACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMP 409
Query: 199 VKNYISWNMMFSGFALNFDCDGALE---LFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ +SW + G+A DC +E FK+M +G+E N +T+
Sbjct: 410 KRDVVSWTALVGGYA---DCGQVVESFSTFKKMLQQGVEANKITYM-------------- 452
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
VL C++ A GK IH V+K G + V NAL+
Sbjct: 453 ---------------------CVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMS 491
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
+Y K G V+ A + + +++V+WN LI A+ G EA++ F ++ + RP
Sbjct: 492 MYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEE----MRP 547
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQLA-KVVANSVTISGLLSVCAESAALNIGREI 434
N ++ V+ A EE F M+ +V + ++ + A + L ++
Sbjct: 548 NATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDV 607
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ---IEKKDLITWNSMISGYGMN 491
++ + + + LL G +E G EQ +E ++ T+ S+ Y
Sbjct: 608 ---ILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAA 664
Query: 492 GLGENALATFEEMIEAGFKPD 512
G+ + + M E G K +
Sbjct: 665 GMWRDVAKLRKLMKERGVKKE 685
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 153/347 (44%), Gaps = 34/347 (9%)
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
+ S+ ++D SM + W A D+ + + +S LL
Sbjct: 5 LISRWSRVDKSSMIPTSTDGWYA-------------PADVLQYLHQKGSQVDSYDYVKLL 51
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
C ++ L +G+++H H++R M N+ + N LL +Y+ CG + E +F++ K ++
Sbjct: 52 QSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVV 111
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN MISGY GLG+ A F M + G +PD FV++LSACS +N GR + +
Sbjct: 112 SWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVH-VR 170
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
V E + ++ + + G +++A + M + W TL + + +
Sbjct: 171 VMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASR-DEVSWTTLTGA---YAESGY 226
Query: 600 AEAMASQIFGLITE-TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
A+ ++ E S + N+ +A G ++A KG K++ Q V+
Sbjct: 227 AQESLKTYHAMLQEGVRPSRITYMNVLSACGS--------LAALEKG-KQIHAQI---VE 274
Query: 659 RKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMM 705
+ H ++ + + C +++ E C+P+ D+I W M
Sbjct: 275 SEHHSDVRVSTALTKMYIKCGAVKDAREVFE---CLPNRDVIAWNTM 318
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/662 (31%), Positives = 337/662 (50%), Gaps = 93/662 (14%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
L +C + + Q+H Q++ + F+A ++++ ++ L A NVF P +
Sbjct: 28 LHKCSNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVP---HPNV 84
Query: 98 LLWNSILRVNVSNGLYEN-ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
L+NSI+R + N + + + +M+K G+ D FT+P +++AC S +
Sbjct: 85 HLYNSIIRAHAHNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSS----LPLVR 140
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQ--MSDSFKLFDKVRVKNYISWNMMFSGFAL 214
++H HV + GF G++ + N LI Y++ G + + LF ++ ++ ++WN M G
Sbjct: 141 MIHAHVEKFGFYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVR 200
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
+ +GA +LF M E + V+W ++L +A+ G ++ +LF+ M +R I
Sbjct: 201 CGELEGACKLFDEMP----ERDMVSWNTMLDGYAKAGEMDRAFELFERMPQRNI------ 250
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ ++C Y K GD+ +A+ LF
Sbjct: 251 ---------------------------------VSWSTMVCGYSKGGDMDMARVLFDRCP 277
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
KN+V W +I YAE G EA E++ ++E+ + RP+
Sbjct: 278 AKNVVLWTTIIAGYAEKGFVREATELYGKMEE----AGLRPD------------------ 315
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
+ IS +L+ CAES L +G+ IH + R V N +
Sbjct: 316 ----------------DGFLIS-ILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFI 358
Query: 455 NMYMKCGCLEEGHLVFE-QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
+MY KCGCL+ VF + KKD+++WNSMI G+ M+G GE AL F M+ GF+PD
Sbjct: 359 DMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDT 418
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
FV +L AC+HAGLVNEGR+ F M + + I PQ+EHY CM+DLLGR G L+EA +++
Sbjct: 419 YTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLR 478
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
+MPMEPNA + GTLLN+CRMH + D A A+ Q+F + G+Y LLSNIYA +G W +
Sbjct: 479 SMPMEPNAIILGTLLNACRMHNDVDFARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMN 538
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
A VR+ G +K +G S IEV+ ++H F+ + ++ ++++ L + G
Sbjct: 539 VANVRLQMMNTGGQKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYKMIDRLVQDLRQVGY 598
Query: 694 VP 695
VP
Sbjct: 599 VP 600
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 108/470 (22%), Positives = 193/470 (41%), Gaps = 56/470 (11%)
Query: 10 HQFSPSNPSRPFSI---ITYNNSLLDCFDH--LLQQC---KTIHQLKQVHNQLIVTGANA 61
H + S+PS PF+ + N D F + LL+ C ++ ++ +H + G
Sbjct: 94 HAHNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYG 153
Query: 62 SAFLAARVLSIYARFGR--LFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKL 119
F+ ++ Y+R G L A ++F + + WNS++ V G E A KL
Sbjct: 154 DIFVPNSLIDSYSRCGSAGLDGAMSLFLAMK---ERDVVTWNSMIGGLVRCGELEGACKL 210
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
+ +M + ++ +A + +F + + Q N+ + ++
Sbjct: 211 FDEMPERDMVSWNTMLDGYAKAGEMDRAFE------------LFERMPQRNIVSWSTMVC 258
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
Y+K G M + LFD+ KN + W + +G+A A EL+ +ME GL P+
Sbjct: 259 GYSKGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGF 318
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV-----CADLAADHMGKVI 294
S+L++ A G L + MR+ G + + + + C D A D V
Sbjct: 319 LISILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFD----VF 374
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE----EKNIVSWNALITSYAE 350
G + K V N++I + HG + A LFS + E + ++ L+ +
Sbjct: 375 SGMMAKKD----VVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTH 430
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
AGL +E + F +EK+ G P V + ++ G +EA L R M +
Sbjct: 431 AGLVNEGRKYFYSMEKVYGIV---PQVEHYGCMMDLLGRGGHLKEAFTLLRSMPME---P 484
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRV--------SMNKNILVQNG 452
N++ + LL+ C ++ R + + +V S+ NI Q G
Sbjct: 485 NAIILGTLLNACRMHNDVDFARAVCEQLFKVEPTDPGNYSLLSNIYAQAG 534
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/659 (33%), Positives = 345/659 (52%), Gaps = 80/659 (12%)
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY--- 120
FL +LS YAR G L DAR VF+ P ++ +N++L G ++AL L+
Sbjct: 51 FLLNTLLSAYARLGSLHDARRVFDGMP---HRNTFSYNALLSACARLGRADDALALFGAI 107
Query: 121 ------------VKMRKLGVLGDGFTFPLVIRACKF-MGSFRFRFSF-----------GQ 156
+ + G GD F + A F + ++ F + G+
Sbjct: 108 PDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKASRTGE 167
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
VH V + +V+I L+ MYAK + ++ K+FD + +N +SWN + + + N
Sbjct: 168 QVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCYEQNG 227
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
D AL LF RM +G P+ VT +A
Sbjct: 228 PVDEALALFVRMMKDGFVPDEVT-----------------------------------LA 252
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGG-FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
V+S CA LAA G+ +H ++K F + + + NAL+ +Y K G A+ +F +
Sbjct: 253 SVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAI 312
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
+++VS ++IT YA++ +A VF Q M NV++W+ +I +A N EE
Sbjct: 313 RSVVSETSMITGYAKSANVGDAQAVFLQ--------MVEKNVVAWNVLIATYAHNSEEEE 364
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM------NKNILV 449
AL LF +++ V T +L+ CA A L +G++ H HV++ ++ V
Sbjct: 365 ALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFV 424
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
N L++MY+K G + +G VFE++ +D ++WN+MI GY NG ++AL FE M+ +
Sbjct: 425 GNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNE 484
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
+PD V + VLSAC H+GLV EGRR F M + I P +HY CM+DLLGRAG L+E
Sbjct: 485 RPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVE 544
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASG 629
++++NMPMEP+A +W +LL +CR+HKN D+ E A ++F L + +G Y+LLSN+YA G
Sbjct: 545 ELIENMPMEPDAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELG 604
Query: 630 RWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
+W D +VR S K +G+ K G SWIE+ RK+++F + +++ + + L + +QM
Sbjct: 605 KWADVFRVRRSMKHRGVSKQPGCSWIEIGRKVNVFLARDNIHPCRNEIHDTLRIIQMQM 663
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 142/273 (52%), Gaps = 8/273 (2%)
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
F F+ N L+ Y + G + A+ +F + +N S+NAL+++ A G D+A+ +F
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALF- 104
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
G++ P+ S++AV+ A A +GRG +AL M V N+ + + LS C
Sbjct: 105 -------GAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSAC 157
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A A G ++H V + S ++ + L++MY KC EE VF+ + ++++++WN
Sbjct: 158 ASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWN 217
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
S+I+ Y NG + ALA F M++ GF PD V +V+SAC+ EGR++ MV+
Sbjct: 218 SLITCYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKS 277
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
R M +VD+ + G EA + M
Sbjct: 278 DRFREDMVLNNALVDMYAKCGRTWEAKCVFDRM 310
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 182/377 (48%), Gaps = 48/377 (12%)
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F G ++N L+ YA++G + D+ ++FD + +N S+N + S A D AL LF
Sbjct: 46 FAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFG 105
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
+ +P+ ++ +++++ A+ GR + + M + A + A LS CA
Sbjct: 106 AIP----DPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEK 161
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
A G+ +H V K V++ AL+ +Y K + AQ +F + E+NIVSWN+LIT
Sbjct: 162 ASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLIT 221
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
Y + G DEA+ +F ++ K DG
Sbjct: 222 CYEQNGPVDEALALFVRMMK-DG------------------------------------- 243
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS-MNKNILVQNGLLNMYMKCGCLEE 465
V + VT++ ++S CA AA GR++H +V+ +++++ N L++MY KCG E
Sbjct: 244 -FVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWE 302
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
VF+++ + +++ SMI+GY + +A A F +M+E VA+ +++ +H
Sbjct: 303 AKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNV----VAWNVLIATYAH 358
Query: 526 AGLVNEGRRIFDMMVRE 542
E R+F + RE
Sbjct: 359 NSEEEEALRLFVRLKRE 375
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 188/363 (51%), Gaps = 22/363 (6%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+QVH + + + ++ ++ +YA+ R +A+ VF+ P + + + WNS++
Sbjct: 167 EQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMP---ERNIVSWNSLITCY 223
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG- 166
NG + AL L+V+M K G + D T V+ AC + + R G+ VH +++
Sbjct: 224 EQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGR----EGRQVHTRMVKSDR 279
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F+ ++ + N L+ MYAK G+ ++ +FD++ +++ +S M +G+A + + A +F
Sbjct: 280 FREDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFL 339
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
+M +E N V W L++++A EE + LF +++ + VL+ CA+LA
Sbjct: 340 QM----VEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLA 395
Query: 287 ADHMGKVIHGFVIKGGF------EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
+G+ H V+K GF E VFV N+L+ +Y K G + +F + ++ VS
Sbjct: 396 NLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAARDNVS 455
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
WNA+I YA+ G +A+ +F ++ S ERP+ ++ V+ A +G +E F
Sbjct: 456 WNAMIVGYAQNGRAKDALLLFERML----CSNERPDSVTMIGVLSACGHSGLVKEGRRYF 511
Query: 401 RKM 403
+ M
Sbjct: 512 QSM 514
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 120/243 (49%), Gaps = 21/243 (8%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
NN+L+D + +C + K V +++ + S +++ YA+ + DA+ VF
Sbjct: 287 NNALVDMY----AKCGRTWEAKCVFDRMAIR----SVVSETSMITGYAKSANVGDAQAVF 338
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+ + + WN ++ N E AL+L+V++++ V +T+ V+ AC +
Sbjct: 339 LQM---VEKNVVAWNVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLA 395
Query: 147 SFRFRFSFGQIVHNHVLQMGF------QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
+ + GQ H HVL+ GF + +V + N L+ MY K G +SD K+F+++ +
Sbjct: 396 NLQL----GQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAAR 451
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
+ +SWN M G+A N AL LF+RM P+ VT +LS+ G ++E F
Sbjct: 452 DNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRYF 511
Query: 261 DMM 263
M
Sbjct: 512 QSM 514
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 103/253 (40%), Gaps = 66/253 (26%)
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
N LL+ Y + G L + VF+ + ++ ++N+++S G ++ALA F + +
Sbjct: 54 NTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALALFGAIPD---- 109
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
PD ++ AV++A + G + R M A D
Sbjct: 110 PDQCSYNAVVAALAQHGRGGDALRFLAAM---------------------------HADD 142
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETT-GSYML----LSNIY 625
V NAY + + L++C K + E Q+ L+T+++ GS + L ++Y
Sbjct: 143 FVL------NAYSFASALSACASEKASRTGE----QVHALVTKSSHGSDVYIGTALVDMY 192
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A R E+A KV + + + SW NSL + + V E LA
Sbjct: 193 AKCERPEEAQKVFDAMPERNIV-----SW-------------NSLITCYEQNGPVDEALA 234
Query: 686 L--QMENKGCVPD 696
L +M G VPD
Sbjct: 235 LFVRMMKDGFVPD 247
>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/728 (29%), Positives = 364/728 (50%), Gaps = 42/728 (5%)
Query: 20 PFSIITYNNSLLDCFDHLLQQCKTIHQL-----KQVHNQLIVTGANASAFLAARVLSIYA 74
P+S + L DC D L T H++ Q+H+ + TG + + ++ + A
Sbjct: 41 PYSAGVLVSLLRDCAD--LHGDDTDHRVARRLAPQLHSLAVRTGLSRDPRVTCALVDLLA 98
Query: 75 RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFT 134
R GR + A D ++LWN + + ++ A+ ++ +M+ GV DG+T
Sbjct: 99 RLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYT 158
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
V+ AC G+ R G+ VH + L++ + + L GMYA+ ++ + ++
Sbjct: 159 CARVLHACGRAGALRE----GRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVL 214
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
D + + + WN + + A D ALEL RM G EPN TW ++LS +R GR
Sbjct: 215 DAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDR 274
Query: 255 ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
E + + M K+G+ A ++ +L A+ G IH F ++ E V+ AL+
Sbjct: 275 EALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALV 334
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK-------- 366
+Y K G + AQ + +E +N+ +WN+L+ YA AG D A+E+ ++K
Sbjct: 335 DMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDIT 394
Query: 367 -----LDGGSME------------------RPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+ G SM PNV+SW+++I NG E++ +M
Sbjct: 395 TWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEM 454
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
Q V + VT+S LL CA A G+E+H +R + + +++V L++MY K G L
Sbjct: 455 QKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSL 514
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
++FE I++K+L+ N+M++G ++G G A+ F +M +G KPD + F A+L+AC
Sbjct: 515 VSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTAC 574
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
GLV EG FD M ++ ++P E+YACMVDLL R G L EA D ++ P++P A
Sbjct: 575 RSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASH 634
Query: 584 WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKT 643
WG LL C +H N +AE A +F L + +Y+L+ N+Y +++A ++ + K
Sbjct: 635 WGALLTGCSIHGNLALAEVAARNLFILEPYNSANYLLMMNLYEYERMYDEAESLKYAMKA 694
Query: 644 KGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWE 703
+G+ G SWI++++ IH+F + + E L L Q++ G VPD I +
Sbjct: 695 RGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYN 754
Query: 704 MMGKKNVK 711
+ ++ K
Sbjct: 755 VQEEEKEK 762
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/662 (32%), Positives = 339/662 (51%), Gaps = 93/662 (14%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
L +C + + Q+H Q++ + F+A ++++ ++ L A NVF P +
Sbjct: 28 LHKCTNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVP---HPNV 84
Query: 98 LLWNSILRVNVSNGLYEN-ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
L+NSI+R + N + + + +M+K G+ D FT+P +++AC S +
Sbjct: 85 HLYNSIIRAHAHNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGPSS----LPLVR 140
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQ--MSDSFKLFDKVRVKNYISWNMMFSGFAL 214
++H HV ++GF G++ + N LI Y++ G + + LF + ++ ++WN M G
Sbjct: 141 MIHAHVEKIGFYGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVR 200
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
+ GA +LF M + + V+W ++L +A+ G ++ +LF+ M R I
Sbjct: 201 CGELQGACKLFDEMP----DRDMVSWNTMLDGYAKAGEMDTAFELFERMPWRNI------ 250
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ ++C Y K GD+ +A+ LF
Sbjct: 251 ---------------------------------VSWSTMVCGYSKGGDMDMARMLFDRCP 277
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
KN+V W +I YAE GL EA E++ ++E+ + RP+
Sbjct: 278 VKNVVLWTTIIAGYAEKGLAREATELYGKMEE----AGMRPD------------------ 315
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
D F + +L+ CAES L +G+ IH + R V N +
Sbjct: 316 ---DGF--------------LLSILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFI 358
Query: 455 NMYMKCGCLEEGHLVFE-QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
+MY KCGCL+ VF + KKD+++WNSMI G+ M+G GE AL F M++ GF+PD
Sbjct: 359 DMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDT 418
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
FV +L AC+HAGLVNEGR+ F M + + I PQ+EHY CM+DLLGR G L+EA +++
Sbjct: 419 YTFVGLLCACTHAGLVNEGRKYFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLR 478
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
+MPMEPNA + GTLLN+CRMH + D+A A+ Q+F L G+Y LLSNIYA +G W +
Sbjct: 479 SMPMEPNAIILGTLLNACRMHNDVDLARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMN 538
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
A VR+ K G +K +G S IEV+ ++H F+ + ++ ++++ L + G
Sbjct: 539 VANVRLQMKNTGGEKPSGASSIEVEEEVHEFTVFDQSHPKSDDIYQMIDRLVQDLRQVGY 598
Query: 694 VP 695
VP
Sbjct: 599 VP 600
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/697 (30%), Positives = 361/697 (51%), Gaps = 86/697 (12%)
Query: 34 FDHLLQQCKTIH----QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA 89
F LL C + ++ VH +I +G + F+ R++ YA+ G L D R +F+
Sbjct: 22 FAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKM 81
Query: 90 P------------------FDCKSSSLL----------WNSILRVNVSNGLYENALKLYV 121
P F ++ SL WNS++ + E AL +
Sbjct: 82 PQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFA 141
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
M K G + + +TF + AC + + G +H+ + + +V+I + L+ MY
Sbjct: 142 MMHKEGFVLNEYTFASGLSACSGLNDM----NRGVQIHSLIAKSPCLSDVYIGSALVDMY 197
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
+K G ++D+ ++FD++ +N +S W
Sbjct: 198 SKCGNVNDAQQVFDEMGDRNVVS-----------------------------------WN 222
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK- 300
SL++ + + G E + +F +M + +E +A V+S CA L+A +G+ +H V+K
Sbjct: 223 SLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKM 282
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
+ + + NA + +Y K +K A+ +F + +N+++ ++++ YA A A +
Sbjct: 283 DKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLM 342
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
F++ M NV+SW+A+I + NG EEAL LF ++ V T + +L
Sbjct: 343 FTK--------MAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILK 394
Query: 421 VCAESAALNIGREIHGHVVRVSMN------KNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
CA+ A L++G + H HV++ +I V N L++MY+KCGC+EEG+LVF ++
Sbjct: 395 ACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
++D ++WN+MI G+ NG G AL F EM+++G KPD + + VLSAC HAG V EGR
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRH 514
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F M R+F + P +HY CMVDLLGRAG L+EA I++ MP++P++ +WG+LL +C++H
Sbjct: 515 YFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVH 574
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
+N + + +A ++F + T +G Y+LLSN+YA G+W DA VR + +G+ K G SW
Sbjct: 575 RNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSW 634
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
I++ H+F + K + +L+ L +M K
Sbjct: 635 IKIPGHAHVFMVKDKSHPRKKQIHSLLDILIAEMRQK 671
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/669 (30%), Positives = 368/669 (55%), Gaps = 58/669 (8%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+++H L+ N+ L + ++ +Y++ G + +A VF + + + + +N++L
Sbjct: 397 RELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSL---LERNEVSYNALLAGY 453
Query: 108 VSNGLYENALKLYVKMR-KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
V G E AL+LY M+ + G+ D FTF ++ C + + + G+ +H H+++
Sbjct: 454 VQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLC----ANQRNDNQGRQIHAHLIRAN 509
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
N+ + EL+ MY++ G++ NY A E+F
Sbjct: 510 ITKNIIVETELVHMYSECGRL-------------NY------------------AKEIFN 538
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
RM E N +W S++ + + G +E + LF M+ GI+ +++ +LS C L+
Sbjct: 539 RMA----ERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLS 594
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
G+ +H F+++ E+ ++ L+ +Y K G + A ++ + +K+++ N +++
Sbjct: 595 DSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVS 654
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
++ +G ++A +F Q ME+ N W++++ +A+ G +E+ + F +M +
Sbjct: 655 AFVNSGRANDAKNLFDQ--------MEQRNTALWNSILAGYANKGLKKESFNHFLEMLES 706
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS-MNKNILVQNGLLNMYMKCGCLEE 465
+ + +T+ ++++C+ AL G ++H +++ +N +++++ L++MY KCG + +
Sbjct: 707 DIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITK 766
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
VF+ + K++++WN+MISGY +G + AL +EEM + G P+ V F+A+LSACSH
Sbjct: 767 ARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSH 826
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
GLV EG RIF M ++ IE + EHY CMVDLLGRAG L++A + V+ MP+EP WG
Sbjct: 827 TGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWG 886
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
LL +CR+HK+ D+ A ++F L + G Y+++SNIYAA+GRW++ +R K KG
Sbjct: 887 ALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKG 946
Query: 646 LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMM 705
+KK G SWIE+ +I +F +G+ + + L L LQ + G +PD IL
Sbjct: 947 VKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFIL---- 1002
Query: 706 GKKNVKRIQ 714
+NVK I+
Sbjct: 1003 --QNVKDIK 1009
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 160/596 (26%), Positives = 274/596 (45%), Gaps = 100/596 (16%)
Query: 15 SNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA 74
+ P+ + + Y++ + DC D + + K +H Q+I G N A+L ++L +YA
Sbjct: 63 TKPASDVNPLPYSSLIQDCID-----SNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYA 117
Query: 75 RFGRLFD---ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
R G L D AR +FE P + + WN+++ Y L+LY +MR G D
Sbjct: 118 RSGCLDDLCYARKLFEEMP---ERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSD 174
Query: 132 GFTFPLVIRAC---KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
FTFP VI+AC + MG R + + V++ G N+ + L+ YA+ G M
Sbjct: 175 KFTFPSVIKACIAMEDMGGVR-------QLQSSVVKAGLNCNLFVGGALVDGYARFGWMD 227
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
D+ D++ + ++WN + +G+ + A +F RM G+ P+ T+ S
Sbjct: 228 DAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFAS------ 281
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
L VC L + GK +H +I GF+ F
Sbjct: 282 -----------------------------ALRVCGALRSRDGGKQVHSKLIACGFKGDTF 312
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V NALI +Y K D + +F E+ E+N V+WN++I++ A+ G ++A+ +F
Sbjct: 313 VGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLF------- 365
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
+MQ + +N + +L A A +
Sbjct: 366 --------------------------------LRMQESGYKSNRFNLGSILMASAGLADI 393
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
GRE+HGH+VR +N +I++ + L++MY KCG +EE H VF + +++ +++N++++GY
Sbjct: 394 GKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGY 453
Query: 489 GMNGLGENALATFEEM-IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
G E AL + +M E G +PD F +L+ C++ N+GR+I ++R I
Sbjct: 454 VQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRA-NITK 512
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+ +V + G L A +I M E NAY W +++ +N + EA+
Sbjct: 513 NIIVETELVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEG--YQQNGETQEAL 565
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/539 (26%), Positives = 258/539 (47%), Gaps = 86/539 (15%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +++ C + + +Q+ + ++ G N + F+ ++ YARFG + DA +
Sbjct: 178 FPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIE 237
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+S + WN+++ V +E A ++ +M K+GV D FTF +R C G+ R
Sbjct: 238 ---GTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVC---GALRS 291
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
R G+ VH+ ++ GF+G+ + N LI MYAK K+FD++
Sbjct: 292 R-DGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMG------------ 338
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
E N VTW S++S+ A+ G + + LF M++ G +
Sbjct: 339 -----------------------ERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKS 375
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+ +L A LA G+ +HG +++ NL
Sbjct: 376 NRFNLGSILMASAGLADIGKGRELHGHLVR---------------------------NLL 408
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+ +I+ +AL+ Y++ G+ +EA +VF L +ER N +S++A++ +
Sbjct: 409 N----SDIILGSALVDMYSKCGMVEEAHQVFRSL-------LER-NEVSYNALLAGYVQE 456
Query: 391 GRGEEALDLFRKMQLAK-VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
G+ EEAL+L+ MQ + + T + LL++CA N GR+IH H++R ++ KNI+V
Sbjct: 457 GKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIV 516
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
+ L++MY +CG L +F ++ +++ +WNSMI GY NG + AL F++M G
Sbjct: 517 ETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGI 576
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
KPD + ++LS+C +GR + + +VR +E + +VD+ + G + A
Sbjct: 577 KPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRN-TMEEEGILQVVLVDMYAKCGSMDYA 634
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 371 bits (952), Expect = e-99, Method: Compositional matrix adjust.
Identities = 226/706 (32%), Positives = 365/706 (51%), Gaps = 106/706 (15%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFDCKSSSLLWNSILRVN 107
+VH+ + T L +LS++ RFG L +A VF + A D S WN ++
Sbjct: 115 RVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFS----WNVLVGGY 170
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
G ++ AL LY +M +G+ D +TFP V+R C + + G+ VH HV++ GF
Sbjct: 171 AKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPD----LARGREVHLHVIRYGF 226
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ +V +VN LI MY K G + + +FD++ ++ ISWN M SG+ N C L LF
Sbjct: 227 ESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFM 286
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M ++P+ +T TS V+S C L
Sbjct: 287 MREFFVDPDLMTMTS-----------------------------------VISACEALGD 311
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+ +G+ +HG+VIK GF V V N+LI ++ G A+ +FS++E K++VSW A+I+
Sbjct: 312 ERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISG 371
Query: 348 YAEAGLCDEAVEVFSQLEK----------------------LDGGSM-----ERPNVISW 380
Y + GL ++AVE ++ +E LD G M +R + S+
Sbjct: 372 YEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSY 431
Query: 381 ----SAVIGAFASNGRGEEALDLFRKMQLAKVVA-------------------------- 410
+++I ++ ++AL++F ++ V++
Sbjct: 432 VIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMIL 491
Query: 411 ----NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
NSVT+ +LS CA AL+ G+EIH H +R + + + N LL+MY++CG +E
Sbjct: 492 SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPA 551
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
F E KD+ +WN +++GY G G A+ F +MIE+ PD + F ++L ACS +
Sbjct: 552 WNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRS 610
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
G+V +G F+ M +F I P ++HYA +VDLLGRAG L++A + +K MP++P+ +WG
Sbjct: 611 GMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGA 670
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LLN+CR+++N ++ E A IF + T++ G Y+LL N+YA SG+W++ A+VR + L
Sbjct: 671 LLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRL 730
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
G SW+EV ++H F +G+ +K + VLE +ME G
Sbjct: 731 TVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATG 776
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 114/284 (40%), Gaps = 32/284 (11%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C I L K++H + TG FL +L +Y R GR+ A N F + D
Sbjct: 503 VLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCEKDV 562
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
S WN +L G A++L+ KM + V D TF ++ AC G
Sbjct: 563 AS----WNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLE 618
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
+ + + + + N+ ++ + + G++ D+++ K+ + + G
Sbjct: 619 YFESMEH---KFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDP----DPAIWGAL 671
Query: 214 LNFDCDGALELFKRMELEGLEPNFV---------TWTSLLSSHARCGRLEETMDLFDMMR 264
LN A +++ +EL L + + L + +A G+ +E + +MR
Sbjct: 672 LN-----ACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMR 726
Query: 265 KRGIEV--GAEAIAVVLSVCADLAADHMGKVIHGF--VIKGGFE 304
+ + V G + V V A L D I V++G +E
Sbjct: 727 ENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYE 770
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 371 bits (952), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 245/768 (31%), Positives = 395/768 (51%), Gaps = 74/768 (9%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETA 89
F + + C I ++ H +VTG ++ F+ ++++Y+R L DAR VF E +
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS 189
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACKFMGSF 148
+D S WNSI+ G + AL+++ +M + G D T V+ C +G+
Sbjct: 190 VWDVVS----WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
S G+ +H + N+ + N L+ MYAK G M ++ +F + VK+ +SWN M
Sbjct: 246 ----SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAM 301
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+G++ + A+ LF++M+ E ++ + VTW++ +S +A+ G E + + M GI
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
+ + VLS CA + A GK IH + IK + KN HGD
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID---LRKNG-------HGD------ 405
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+N+V N LI YA+ D A +F L S + +V++W+ +IG ++
Sbjct: 406 -------ENMVI-NQLIDMYAKCKKVDTARAMFDSL------SPKERDVVTWTVMIGGYS 451
Query: 389 SNGRGEEALDLFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK- 445
+G +AL+L +M + + N+ TIS L CA AAL IG++IH + +R N
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 511
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
+ V N L++MY KCG + + LVF+ + K+ +TW S+++GYGM+G GE AL F+EM
Sbjct: 512 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 571
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
GFK DGV + VL ACSH+G++++G F+ M F + P EHYAC+VDLLGRAG L
Sbjct: 572 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 631
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
A +++ MPMEP VW L+ CR+H ++ E A +I L + GSY LLSN+Y
Sbjct: 632 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 691
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A +GRW+D ++R + KG+KK G SW+E + F G+ K + +VL +
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHM 751
Query: 686 LQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRS 745
++++ G VP+ L ++ ++ D++ +H L L +L + +
Sbjct: 752 QRIKDIGYVPETGFALHDVDDEEK---------DDLLFEHS----EKLALAYGILTTPQG 798
Query: 746 TNGQLMKNKLKLGLVVFNLSLKLFND---AVTATNRVISSDIRLENDS 790
++ KN L++ D A T +R+I DI L + S
Sbjct: 799 AAIRITKN------------LRVCGDCHTAFTYMSRIIDHDIILRDSS 834
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 165/570 (28%), Positives = 270/570 (47%), Gaps = 58/570 (10%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
+ +CKTI Q+K +H +L+ G + L + ++S Y G L A ++ P +
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFP-PSDAG 91
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
WNS++R NG L L+ M L D +TFP V +AC + S R G+
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVR----CGE 147
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
H L GF NV + N L+ MY++ +SD+ K+FD++ V + +SWN + +A
Sbjct: 148 SAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 217 DCDGALELFKRMELE-GLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
ALE+F RM E G P+ +T +
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNIT-----------------------------------L 232
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
VL CA L +GK +H F + +FV N L+ +Y K G + A +FS +
Sbjct: 233 VNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSV 292
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
K++VSWNA++ Y++ G ++AV +F ++++ + +V++WSA I +A G G E
Sbjct: 293 KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQE----EKIKMDVVTWSAAISGYAQRGLGYE 348
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR--VSMNKN-----IL 448
AL + R+M + + N VT+ +LS CA AL G+EIH + ++ + + KN +
Sbjct: 349 ALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENM 408
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKK--DLITWNSMISGYGMNGLGENALATFEEMIE 506
V N L++MY KC ++ +F+ + K D++TW MI GY +G AL EM E
Sbjct: 409 VINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Query: 507 --AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+P+ L AC+ + G++I +R + + C++D+ + G
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGS 528
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+ +A + NM M N W +L+ MH
Sbjct: 529 ISDARLVFDNM-MAKNEVTWTSLMTGYGMH 557
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 176/412 (42%), Gaps = 82/412 (19%)
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
W SL+ S+ G + + LF +M V C ++++ G+ H +
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
GF VFV NAL+ +Y + + A+ +F E+ ++VSWN++I SYA+ G A+E
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
+FS++ G RP +++T+ +L
Sbjct: 215 MFSRMTNEFGC---RP-----------------------------------DNITLVNVL 236
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
CA ++G+++H V M +N+ V N L++MY KCG ++E + VF + KD++
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVV 296
Query: 480 TWNSM-----------------------------------ISGYGMNGLGENALATFEEM 504
+WN+M ISGY GLG AL +M
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA-------CMVD 557
+ +G KP+ V ++VLS C+ G + G+ I ++ + I+ + + ++D
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK-YPIDLRKNGHGDENMVINQLID 415
Query: 558 LLGRAGLLQEASDIVKNM-PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
+ + + A + ++ P E + W ++ H + + A + S++F
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMF 467
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 371 bits (952), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 209/655 (31%), Positives = 344/655 (52%), Gaps = 24/655 (3%)
Query: 59 ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
A+ A ++S YA GRL D+ F++ P + ++L N+++ L A+
Sbjct: 85 ADPGPVAATSLVSAYAVAGRLRDSAAFFDSVPV-ARRDTVLHNAMISAFARASLAAPAVS 143
Query: 119 LYVKM--RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNE 176
++ + + D ++F ++ A M S +H V ++G + + N
Sbjct: 144 VFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAV--SHCTQLHCAVHKLGAGAVLSVSNA 201
Query: 177 LIGMYAKM---GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL 233
LI +Y K G D+ K+ D++ K+ ++W + G D A F+ ++ E
Sbjct: 202 LIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGE-- 259
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
V W +++S + + G E +LF M + I +LS CA+ GK
Sbjct: 260 --FDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKS 317
Query: 294 IHGFVIK--GGF--EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+HG I+ F E + V NAL+ +Y K G + VA +F + K++VSWN +++ Y
Sbjct: 318 VHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYI 377
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
E+G D A +F + M + +SW ++ + G E+AL LF +M+ V
Sbjct: 378 ESGCLDNAARIFKE--------MPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVK 429
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
T +G ++ C E AL G+++H H+V+ + N LL MY +CG +++ LV
Sbjct: 430 PCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLV 489
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F + D ++WN+MIS G +G G AL F++M+ G PD ++F+ +L+AC+HAGLV
Sbjct: 490 FLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLV 549
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
++G + F+ M R+F I P +HYA ++DLLGRAG + EA D++K MP EP +W +L+
Sbjct: 550 DDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILS 609
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
CR++ + ++ A Q+F ++ E G+Y+LLSN Y+A+GRW DAA+VR + +G+KK
Sbjct: 610 GCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKE 669
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G SWIEV K+H+F G++ D V LE + +M G VPD L +M
Sbjct: 670 PGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMVGAKMRKLGYVPDTKFALQDM 724
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 18/228 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H L+ G AS +L++YAR G + DAR VF P S+ WN+++
Sbjct: 452 KQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMP---NVDSVSWNAMISAL 508
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+G AL+L+ +M G+ D +F ++ AC G F + + + G
Sbjct: 509 GQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMER---DFGI 565
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMMFSGFALNFDCD----GAL 222
LI + + G++ ++ L + + + W + SG +N D + A
Sbjct: 566 SPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAAD 625
Query: 223 ELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+LFK + E +G T+ L ++++ GR + + +MR RG++
Sbjct: 626 QLFKMVPEHDG------TYILLSNTYSAAGRWVDAARVRKLMRDRGVK 667
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 371 bits (952), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 213/727 (29%), Positives = 367/727 (50%), Gaps = 104/727 (14%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
LL+ C ++ +L Q+ +I G +++S+++++G + +A VFE P D K
Sbjct: 55 LLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFE--PIDDKLD 112
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
+L ++++L+ N E AL +MR V + F +++ C + G+
Sbjct: 113 AL-YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKR----GK 167
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H ++ F NV + ++ MYAK Q+ D++K+FD++
Sbjct: 168 EIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMP------------------ 209
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
E + V+W ++++ ++ G ++ ++L M+ G + +
Sbjct: 210 -----------------ERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLV 252
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
VL AD+ +GK IHG+ I+ GF V + AL +Y K G V+ A+ +F +++K
Sbjct: 253 TVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQK 312
Query: 337 NIVSWNALITSYA----------------EAGLCDEAVEVFSQLEKL-DGGSMERPNVI- 378
+VSWN+++ Y E G+ V + L D G +ER +
Sbjct: 313 TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVH 372
Query: 379 --------------------------------------------SWSAVIGAFASNGRGE 394
SW+A+I +A NGR
Sbjct: 373 KFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVS 432
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
EAL+ F +M+ + +S T+ ++ AE + + IHG ++R ++KNI V L+
Sbjct: 433 EALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALV 492
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCG + +F+ I + +ITWN+MI GYG +GLG AL F++M + +P+ +
Sbjct: 493 DMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDI 552
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
+++V+SACSH+GLV+EG R F M +++ +EP M+HY MVDLLGRAG ++EA D ++N
Sbjct: 553 TYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIEN 612
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP+ P V+G +C++HKN +V E A ++F L + G ++LL+NIYA++ +W
Sbjct: 613 MPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKV 672
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
A+VR + + KGLKK G S +E++ ++H F SG++ K + LEEL +++ G V
Sbjct: 673 AEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEELVYEIKAAGYV 732
Query: 695 PDNDIIL 701
PD ++IL
Sbjct: 733 PDTNLIL 739
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 203/612 (33%), Positives = 333/612 (54%), Gaps = 71/612 (11%)
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
KS+ WNS++ G AL+ + +RKLG++ +FP I++C +
Sbjct: 1104 KSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL----V 1159
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G++ H GF+ ++ + + LI MY+K GQ+ D+ LFD++ ++N +SW M +G+
Sbjct: 1160 SGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYV 1219
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
N D AL LFK LEE ++ D + + +
Sbjct: 1220 QNEQADNALLLFKDF------------------------LEEETEVED---GNNVPLDSV 1252
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ VLS C+ ++ + + +HGFV+K GF+ + V N L+ Y K G V++ +F
Sbjct: 1253 VMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFD-- 1310
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
W ME + ISW+++I +A +G
Sbjct: 1311 -------W------------------------------MEEKDDISWNSMIAVYAQSGLS 1333
Query: 394 EEALDLFRKM-QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
EAL++F M + V N+VT+S +L CA + AL G+ IH V+++ + N+ V
Sbjct: 1334 GEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS 1393
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
+++MY KCG +E F+++++K++ +W +M++GYGM+G + AL F +M+ AG KP+
Sbjct: 1394 IIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPN 1453
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
+ FV+VL+ACSHAGLV EG F+ M ++ IEP +EHY CMVDL GRAG L EA +++
Sbjct: 1454 YITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLI 1513
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
K M M+P+ VWG+LL +CR+HKN D+ E A ++F L + G Y+LLSN+YA +GRW
Sbjct: 1514 KRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWA 1573
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
D ++R+ K + L K G S +E+K ++H+F G+ + + + LE+L L+++ G
Sbjct: 1574 DVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIG 1633
Query: 693 CVPDNDIILWEM 704
VP+ +L ++
Sbjct: 1634 YVPNMTSVLHDV 1645
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 202/411 (49%), Gaps = 43/411 (10%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H +++ G + + +LI +Y+ G+++ + LF +++ +WN++ +N
Sbjct: 46 IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN-- 103
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
G E+ + L+ M +GI
Sbjct: 104 ---------------------------------GLSEQALMLYKNMVCQGIAADKFTFPF 130
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
V+ C + + +GKV+HG +IK GF VFV+N LI Y K G + A +F ++ +N
Sbjct: 131 VIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRN 190
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
+VSW +I+ G EA +F ++ NV+SW+A+I + N + EEAL
Sbjct: 191 VVSWTTVISGLISCGDLQEARRIFDEIPS--------KNVVSWTAMINGYIRNQQPEEAL 242
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
+LF++MQ + N T+ L+ C E L +GR IH + ++ + + + L++MY
Sbjct: 243 ELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMY 302
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG +++ VFE + +K L TWNSMI+ G++GLG+ AL F EM KPD + F+
Sbjct: 303 SKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFI 362
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
VL AC H V EG F M + + I P EHY CM +L R+ L EA
Sbjct: 363 GVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 202 bits (514), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 195/367 (53%), Gaps = 15/367 (4%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
LLQ CK L+Q+H ++I +G + L +++ +Y+ GR+ A +F C
Sbjct: 33 LLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC--- 89
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
+ WN I+R N NGL E AL LY M G+ D FTFP VI+AC S G+
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSI----DLGK 145
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+VH +++ GF G+V + N LI Y K G + K+F+K+RV+N +SW + SG
Sbjct: 146 VVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGL---I 202
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
C G L+ +R+ E N V+WT++++ + R + EE ++LF M+ I +
Sbjct: 203 SC-GDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMV 261
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
++ C ++ +G+ IH + IK E V++ ALI +Y K G +K A +F + K
Sbjct: 262 SLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRK 321
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
++ +WN++ITS GL EA+ +FS++E+++ +P+ I++ V+ A +E
Sbjct: 322 SLPTWNSMITSLGVHGLGQEALNLFSEMERVN----VKPDAITFIGVLCACVHIKNVKEG 377
Query: 397 LDLFRKM 403
F +M
Sbjct: 378 CAYFTRM 384
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 217/503 (43%), Gaps = 99/503 (19%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++ C + L + H Q V G F+++ ++ +Y++ G+L DAR +F+ P
Sbjct: 1145 FPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP 1204
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVK-MRKLGVLGDGFTFPL-------VIRAC 142
+ + W S++ V N +NAL L+ + + + DG PL V+ AC
Sbjct: 1205 L---RNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSAC 1261
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ + VH V++ GF G++ + N L+ YAK GQ S K+FD + K+
Sbjct: 1262 SRVSG----KGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDD 1317
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
ISWN M + +A + ALE+F M
Sbjct: 1318 ISWNSMIAVYAQSGLSGEALEVFH----------------------------------GM 1343
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
+R G+ A ++ VL CA A GK IH VIK E V V ++I +Y K G
Sbjct: 1344 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 1403
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
V++A+ F ++EKN+ SW A++ Y G EA+++F ++ + + +PN I++ +
Sbjct: 1404 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVR----AGVKPNYITFVS 1459
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS 442
V+ A + G EE F M+ + G E +G +V
Sbjct: 1460 VLAACSHAGLVEEGWHWFNAMK-------------------HKYDIEPGIEHYGCMV--- 1497
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE-KKDLITWNSMISGYGMN---GLGENAL 498
+++ + GCL E + + ++++ K D + W S++ ++ LGE A
Sbjct: 1498 ------------DLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAA 1545
Query: 499 ATFEEMIEAGFKPDGVAFVAVLS 521
E+ PD + +LS
Sbjct: 1546 QKLFEL-----DPDNCGYYVLLS 1563
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 139/326 (42%), Gaps = 57/326 (17%)
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
+++ NV SW++VI A G EAL F ++ ++ + + C+ L G
Sbjct: 1102 VDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSG 1161
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
R H ++ V + L++MY KCG L++ +F++I +++++W SMI+GY N
Sbjct: 1162 RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQN 1221
Query: 492 GLGENALATFEEMIEA--------GFKPDGVAFVAVLSACS-----------HAGLVNEG 532
+NAL F++ +E D V V+VLSACS H +V +G
Sbjct: 1222 EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKG 1281
Query: 533 ------------------------RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+++FD M + I + M+ + ++GL EA
Sbjct: 1282 FDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDIS-----WNSMIAVYAQSGLSGEA 1336
Query: 569 SDI----VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE---TTGSYMLL 621
++ V+++ + NA +L +C + + Q+ + E G+ ++
Sbjct: 1337 LEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSII- 1395
Query: 622 SNIYAASGRWEDAAKVRISAKTKGLK 647
++Y GR E A K K K +K
Sbjct: 1396 -DMYCKCGRVEMAKKTFDRMKEKNVK 1420
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%)
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
R+IH ++R ++ + L+ L+++Y G + L+F QI+ TWN +I +N
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
GL E AL ++ M+ G D F V+ AC++ ++ G+ + +++
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK 153
Score = 43.1 bits (100), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
++ ++K ++ +WNS+I+ G AL F + + G P +F + +CS +
Sbjct: 1099 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 1158
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
G R+ F E + + ++D+ + G L++A + +P+ N W +++
Sbjct: 1159 VSG-RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVSWTSMIT 1216
Query: 590 SCRMHKNTDVA 600
++ D A
Sbjct: 1217 GYVQNEQADNA 1227
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 234/747 (31%), Positives = 390/747 (52%), Gaps = 71/747 (9%)
Query: 14 PSNPSRPFSIITYNNSLLDCFDHLL---QQCKTIHQLKQVHNQLIVTGANASAFLAARVL 70
PS + FS T NN+LL +L +C + QLK+VH +++ TG F A+++
Sbjct: 7 PSISLQNFS--TLNNNLLFRNHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLF 64
Query: 71 SIYA--RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM-RKLG 127
+ A F L ARN+F+ P + + WN+++R S+ + +++ + K
Sbjct: 65 TASALSSFSTLDYARNLFDQIP---QPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCE 121
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
L + FTFP VI+A + + R G VH +++ F +++I+N L+ Y G +
Sbjct: 122 DLPNKFTFPFVIKAASELKASRV----GTAVHGMAIKLSFGMDLYILNSLVRFYGACGDL 177
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
S + +LF + K+ +SWN S++S+
Sbjct: 178 SMAERLFKGISCKDVVSWN-----------------------------------SMISAF 202
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
A+ E+ ++LF M + + + + VLS CA G+ + ++ + G + +
Sbjct: 203 AQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDL 262
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
+ NA++ +Y K G V AQ LF E+ E+++ SW ++ YA+ G D A VF+
Sbjct: 263 TLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFN----- 317
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV-ANSVTISGLLSVCAESA 426
+M + +W+ +I A+ NG+ +EAL +F ++QL+K+ + VT+ LS CA+
Sbjct: 318 ---AMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLG 374
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
A+++G IH ++ R + N + + L++MY KCG LE+ VF +E++D+ W++MI+
Sbjct: 375 AIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIA 434
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
G GM+G G+ A+ F EM EA KP+ V F VL ACSHAGLV+EGR F M + +
Sbjct: 435 GLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVV 494
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
P+M+HYACMVD+LGRAG L+EA +++ M P+A VWG LL +C +H N ++ E + Q
Sbjct: 495 PEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGELASDQ 554
Query: 607 IFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSS 666
+ L G+ +LLSNIYA +GRWE +++R + LKK G S IE +H F
Sbjct: 555 LLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLV 614
Query: 667 GNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHR 726
G++ N+ LEE+A ++++ G P+ +L Q I D++K +
Sbjct: 615 GDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLL------------QLIEEDDLKEQAL 662
Query: 727 IVGFRNLKLGLRLLLSLRSTNGQLMKN 753
+ L + L+ S +++KN
Sbjct: 663 SLHSEKLAIAFGLVTLAPSQPIRVVKN 689
>gi|28564593|dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50509708|dbj|BAD31746.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 703
Score = 370 bits (951), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 218/653 (33%), Positives = 338/653 (51%), Gaps = 49/653 (7%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS-SLLWNSILRVN 107
Q+H + G + L R+LS+Y L + A S+ L +N ++
Sbjct: 94 QLHALSLSLGLSRHPILLPRLLSVYTSHPSLLPS-----AASVAADSTLPLPYNVLISSC 148
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+ +GL AL Y +M K GVL D FT+P V+RAC + G+ VH H G
Sbjct: 149 LRHGLPLQALAAYQEMGKNGVLPDVFTYPSVLRAC----AEARELVLGRAVHMHAAGAGM 204
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
GN+ N L+ MYAK G ++ + K+FD + ++ +SWN M S +A A+ELF+R
Sbjct: 205 DGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRR 264
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M EG E N VTW ++ + + + L M + G EV + + L+ C+ +
Sbjct: 265 MRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNACSRVGW 324
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+GK IHG ++ + V NALI +Y + D++ A+ LF
Sbjct: 325 LRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFR---------------- 368
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
+E P V++W+ ++ +FA + EEA +FR+M
Sbjct: 369 -----------------------MLECPGVVTWNTMLSSFALSDCAEEASSIFREMICRG 405
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
V N VT+ L++CA A L G+E+HGH+V+ L+ N L++MY K G L
Sbjct: 406 VKPNYVTVVTYLALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQ 465
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
VF+ ++ D+I++ SMI+GYGM G G AL FE+MI++G KPD + V VLSACSH+G
Sbjct: 466 NVFDTMDDCDMISYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSG 525
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
LV EG +F+ MV + I+PQMEHY+CM+DL RAGLL++A +++ + P P + +W L
Sbjct: 526 LVLEGEELFNKMVISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAAL 585
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
+ +C N ++ E A ++ + TE G Y+L++N+YAA+G W++ A VR + G+
Sbjct: 586 VGACHDRGNIEIGERAARKLLEMRTENAGHYVLIANMYAAAGCWDELATVRKLMRDLGVT 645
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
K G +W ++ F G+ + VL+EL+ QM N D DI+
Sbjct: 646 KAPGLAWTDLGNGFTPFLVGDRSNPLAPEIYVVLDELSEQMRNINNCSDLDIL 698
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 138/634 (21%), Positives = 244/634 (38%), Gaps = 162/634 (25%)
Query: 27 NNSLLDCFDH--LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFD 81
N L D F + +L+ C +L + VH G + + F ++S+YA+ G L
Sbjct: 167 NGVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLAS 226
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG-------------- 127
AR VF+ + + WNS++ + G + A++L+ +MR G
Sbjct: 227 ARKVFDGM---VQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEVNSVTWNTIAGG 283
Query: 128 -----------------VLG----DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
V G D T + + AC +G R G+ +H ++M
Sbjct: 284 YIQMRDYRAAVGLIREMVRGGAEVDYVTLVIGLNACSRVGWLR----LGKEIHGLAVRMC 339
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+ N LI MYA+ M + LF + ++WN M S FAL+ + A +F+
Sbjct: 340 CDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFR 399
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
M G++PN+VT + L++CA +A
Sbjct: 400 EMICRGVKPNYVT-----------------------------------VVTYLALCARVA 424
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
G+ +HG ++K GF+ Y + N+LI +Y K G + VAQN+F +++ +++S+ ++I
Sbjct: 425 NLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIA 484
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
Y G A+ +F Q+ +D G +P+ I V+ A + +G E +LF KM
Sbjct: 485 GYGMQGKGTVALRLFEQM--IDSGI--KPDHIIMVTVLSACSHSGLVLEGEELFNKM--- 537
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
V+ + + + ++++Y + G LE+
Sbjct: 538 -------------------------------VISYGIKPQMEHYSCMIDLYARAGLLEKA 566
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE-AGFKPDGVAFVAVLSACSH 525
EEM++ F P + A++ AC
Sbjct: 567 -----------------------------------EEMLDHTPFPPTSTMWAALVGACHD 591
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP----MEPNA 581
G + G R ++ E R E HY + ++ AG E + + K M +
Sbjct: 592 RGNIEIGERAARKLL-EMRTE-NAGHYVLIANMYAAAGCWDELATVRKLMRDLGVTKAPG 649
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLITETT 615
W L N D + +A +I+ ++ E +
Sbjct: 650 LAWTDLGNGFTPFLVGDRSNPLAPEIYVVLDELS 683
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/494 (38%), Positives = 291/494 (58%), Gaps = 26/494 (5%)
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
L +R+ E P+ + W ++ ++A G + +DL+ M G+ VL C+
Sbjct: 61 LARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACS 120
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
L A G IH G E VFV AL+ Y K G + AQ LFS + +++V+WNA
Sbjct: 121 GLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNA 180
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDG-------------------------GSMERPNVI 378
+I + GLCD+AV++ Q+++ +G M N +
Sbjct: 181 MIAGCSLYGLCDDAVQLIMQMQE-EGICPNSSTIVGVLPTCQCLLYARKIFDVMGVRNEV 239
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHV 438
SWSA+IG + ++ +EALD+FR MQL+ + + T+ G+L C+ AAL G HG++
Sbjct: 240 SWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYL 299
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
+ + L+ N L++MY KCG + VF ++++ D+++WN+MI GYG++GLG AL
Sbjct: 300 IVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEAL 359
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
F +++ G KPD + F+ +LS+CSH+GLV EGR FD M R+F I P+MEH CMVD+
Sbjct: 360 GLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDI 419
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
LGRAGL+ EA ++NMP EP+ +W LL++CR+HKN ++ E ++ +I L E+TG++
Sbjct: 420 LGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNF 479
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
+LLSNIY+A+GRW+DAA +RI+ K GLKK+ G SWIE+ +H F G+ L +
Sbjct: 480 VLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQIN 539
Query: 679 EVLEELALQMENKG 692
LEEL ++M+ G
Sbjct: 540 RKLEELLVEMKRLG 553
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 199/403 (49%), Gaps = 47/403 (11%)
Query: 20 PFSIITYNNSLLDCFDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARF 76
P NN L HLL+ C K++ + K++H + +NA + + ++ +Y
Sbjct: 2 PLRFEVKNNYL-----HLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSC 56
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
++ AR +F+ P S +LWN I+R NG ++ A+ LY M LGV + +T+P
Sbjct: 57 NQVVLARRLFDEIP---NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYP 113
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
V++AC S G +H+H G + +V + L+ YAK G + ++ +LF
Sbjct: 114 FVLKAC----SGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSS 169
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNF------------------- 237
+ ++ ++WN M +G +L CD A++L +M+ EG+ PN
Sbjct: 170 MSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLYARKI 229
Query: 238 ---------VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
V+W++++ + ++E +D+F MM+ GI+ + VL C+ LAA
Sbjct: 230 FDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 289
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
G HG++I GF + NALI +Y K G + A+ +F+ ++ +IVSWNA+I Y
Sbjct: 290 QHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGY 349
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
GL EA+ +F L L +P+ I++ ++ + + +G
Sbjct: 350 GIHGLGMEALGLFHDLLALG----LKPDDITFICLLSSCSHSG 388
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
LL C +S +L ++IH H ++ + N + V + L +Y+ C + +F++I
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+I WN +I Y NG + A+ + M+ G +P+ + VL ACS + +G I
Sbjct: 74 VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNT 597
+ F +E + +VD + G+L EA + +M + W ++ C ++
Sbjct: 134 -HAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHR-DVVAWNAMIAGCSLYGLC 191
Query: 598 DVAEAMASQI 607
D A + Q+
Sbjct: 192 DDAVQLIMQM 201
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 159/334 (47%), Gaps = 22/334 (6%)
Query: 79 LFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLV 138
L AR +F+ + S W++++ V++ + AL ++ M+ G+ D T V
Sbjct: 223 LLYARKIFDVMGVRNEVS---WSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGV 279
Query: 139 IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR 198
+ AC + + + F H +++ GF + I N LI MY+K G++S + ++F+++
Sbjct: 280 LPACSHLAALQHGFC----SHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMD 335
Query: 199 VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD 258
+ +SWN M G+ ++ AL LF + GL+P+ +T+ LLSS + G + E
Sbjct: 336 RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRL 395
Query: 259 LFDMM-RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
FD M R I E ++ + L + H F+ FE V + +AL+
Sbjct: 396 WFDAMSRDFSIVPRMEHCICMVDI---LGRAGLIDEAHHFIRNMPFEPDVRIWSALLSAC 452
Query: 318 GKHGDVKVAQNLFSEIE---EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
H ++++ + + +I+ ++ ++ L Y+ AG D+A + ++ + D G +
Sbjct: 453 RIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHI--RITQKDWGLKKI 510
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
P SW + G + G+++ +QL+++
Sbjct: 511 PGC-SWIEINGIVHAFVGGDQS-----HLQLSQI 538
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 370 bits (950), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 217/652 (33%), Positives = 348/652 (53%), Gaps = 94/652 (14%)
Query: 59 ANASAFLAARVLSIYARFGRLFDARNVF-----------ETAP--FD--CKSSSLLWNSI 103
AN FL +++ YA+ G ++ ++F E+A FD + WNS+
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
+ VSNGL E L L+ +M LG+ D T V+ C G G+ +H + +
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLL----LGRALHGYAI 278
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
+ F + + N L+ MY+K G ++ + ++F+ + ++ +SW M +G+A D ++
Sbjct: 279 KASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVR 338
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
LF ME EG+ P+ T T++L + A G LE
Sbjct: 339 LFHEMEKEGISPDIFTITTILHACACTGLLEN---------------------------- 370
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
GK +H ++ + + +FV NAL+ +Y K G + A ++FSE++ K+IVSWN
Sbjct: 371 -------GKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNT 423
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+I Y++ L +EA+ +F +++ +PN
Sbjct: 424 MIGGYSKNSLPNEALNLFVEMQ-----YNSKPN--------------------------- 451
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
S+T++ +L CA AAL G+EIHGH++R + + V N L++MY+KCG L
Sbjct: 452 --------SITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGAL 503
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
L+F+ I +KDL++W MI+GYGM+G G A+A F EM +G +PD V+F+++L AC
Sbjct: 504 GLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYAC 563
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
SH+GL++EG F+MM IEP+ EHYAC+VDLL RAG L +A +K MP+EP+A +
Sbjct: 564 SHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATI 623
Query: 584 WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKT 643
WG LL CR++ + +AE +A +F L E TG Y+LL+NIYA + +WE+ K+R
Sbjct: 624 WGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGR 683
Query: 644 KGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
+GL+K G SWIE+K K+H+F +G+S + +L++ +M+ +G P
Sbjct: 684 RGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFP 735
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 180/348 (51%), Gaps = 14/348 (4%)
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
G L M+L + K +E+ VL +CADL + G+ IH + E +
Sbjct: 82 GNLRRAMELINQSPKPDLEL--RTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLG 139
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
+ L+ +Y GD++ + +F ++ + + WN L+ YA+ G E++ +F ++ +L
Sbjct: 140 SKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIR 199
Query: 371 SMERP----------NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
+E +VISW+++I + SNG E+ LDLF +M L + + T+ +++
Sbjct: 200 RVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVA 259
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
C+ + L +GR +HG+ ++ S K + + N LL+MY K G L VFE + ++ +++
Sbjct: 260 GCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVS 319
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
W SMI+GY GL + ++ F EM + G PD +L AC+ GL+ G+ + + +
Sbjct: 320 WTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHN-YI 378
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+E +++ + ++D+ + G + +A + M ++ + W T++
Sbjct: 379 KENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVK-DIVSWNTMI 425
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 176/364 (48%), Gaps = 22/364 (6%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFDCKSSSLLWNSILRV 106
K VHN + + F++ ++ +YA+ G + DA +VF E D S WN+++
Sbjct: 372 KDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVS----WNTMIGG 427
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
N L AL L+V+M + + T ++ AC + + GQ +H H+L+ G
Sbjct: 428 YSKNSLPNEALNLFVEM-QYNSKPNSITMACILPACASLAALER----GQEIHGHILRNG 482
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F + H+ N L+ MY K G + + LFD + K+ +SW +M +G+ ++ A+ F
Sbjct: 483 FSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFN 542
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCADL 285
M G+EP+ V++ S+L + + G L+E F+MMR IE +E A ++ + A
Sbjct: 543 EMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLA-- 600
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV----KVAQNLFSEIEEKNIVSW 341
A ++ K + F+ E + AL+C + DV KVA+++F E+E +N +
Sbjct: 601 RAGNLSKA-YKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVF-ELEPENTGYY 658
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
L YAEA ++ EV E++ + + SW + G G+ + L
Sbjct: 659 VLLANIYAEA---EKWEEVKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLAN 715
Query: 402 KMQL 405
K++L
Sbjct: 716 KIEL 719
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 218/685 (31%), Positives = 357/685 (52%), Gaps = 53/685 (7%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L C L QVH ++ G F+ ++ Y G + R VF+
Sbjct: 142 FPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMS 201
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + W S++ G Y+ A+ L+ +M ++G+ + T VI AC + +
Sbjct: 202 ---ERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQL 258
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ V + ++ + N +VN L+ MY K G + + K+FD
Sbjct: 259 ----GEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFD--------------- 299
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
E ++ N V + +++S++ R G E + + M K G
Sbjct: 300 --------------------ECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRP 339
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+ +S C++L GK HG+V++ G E + V NA+I +Y K G ++A +F
Sbjct: 340 DRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVF 399
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+ K VSWN+LI + G + A ++FS +M +++SW+ +IGA
Sbjct: 400 DRMLNKTRVSWNSLIAGFVRNGDMESAWKIFS--------AMPDSDLVSWNTMIGALVQE 451
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
+EA++LFR MQ + A+ VT+ G+ S C AL++ + IHG++ + ++ ++ +
Sbjct: 452 SMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLG 511
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
L++M+ +CG + VF ++ K+D+ W + I M G G A+ F+EM++ G K
Sbjct: 512 TALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIK 571
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
PDGV FVA+L+A SH GLV +G IF M + I PQ HY CMVDLLGRAGLL EA
Sbjct: 572 PDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALS 631
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
++ +M MEPN +WG+LL +CR+HKN D+A A +I L E TG ++LLSNIYA++GR
Sbjct: 632 LINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGR 691
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
W+D AKVR+ K KG K+ G S IE+ KI F++G+ ++ ++ +L+E+ ++ +
Sbjct: 692 WDDVAKVRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRD 751
Query: 691 KGCVPDNDIILWEMMGKKNVKRIQR 715
G VPD +L ++ K+ + R
Sbjct: 752 IGYVPDLTNVLLDVNEKEKEYLLSR 776
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 147/630 (23%), Positives = 260/630 (41%), Gaps = 137/630 (21%)
Query: 17 PSRPFSIITYNNSLLDCFDH-------LLQQCKTIHQLKQVHNQLIVTGANASAFLAARV 69
P+ P S+ N + L ++CKT+ +LKQ+H+Q+ G N +
Sbjct: 12 PATPTSVALPNQNELKILTKHRSSPTGSFKKCKTMTELKQLHSQITKNGLNHHPLSLTNL 71
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSL------------LWNSILRVNVSNGLYENAL 117
+S G FE+ + K+ L +++S++R + GL A+
Sbjct: 72 ISSCTEMG-------TFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAI 124
Query: 118 KLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNEL 177
++ ++ +G + D FTFP V+ AC + F VH +++MGF+ ++ + N L
Sbjct: 125 VVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQ----VHGAIVKMGFERDMFVENSL 180
Query: 178 IGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNF 237
I Y + G++ ++FDK+ E N
Sbjct: 181 IHFYGECGEIDCMRRVFDKMS-----------------------------------ERNV 205
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
V+WTSL+ +A+ G +E + LF M + GI + + V+S CA L +G+ +
Sbjct: 206 VSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTC 265
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
+ + E + NAL+ +Y K G + A+ +F E +KN+V +N ++++Y GL E
Sbjct: 266 IGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREV 325
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
+ V ++ K RP + +T+
Sbjct: 326 LAVLGEMLK----HGPRP-----------------------------------DRITMLS 346
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
+S C+E ++ G+ HG+V+R + V N ++NMYMKCG E VF+++ K
Sbjct: 347 AVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKT 406
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEA------------------------------ 507
++WNS+I+G+ NG E+A F M ++
Sbjct: 407 RVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQS 466
Query: 508 -GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
G D V V V SAC + G ++ + I +++ I M +VD+ R G Q
Sbjct: 467 EGITADKVTMVGVASACGYLGALDLAKWIHG-YIKKKDIHFDMHLGTALVDMFARCGDPQ 525
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
A + M ++ + W + + M N
Sbjct: 526 SAMQVFNKM-VKRDVSAWTAAIGAMAMEGN 554
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 303/520 (58%), Gaps = 13/520 (2%)
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
A+ G+++++ LF+++ +SWN M +G+ N D A ELF RM N ++W
Sbjct: 332 ARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFR----NTISWA 387
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
+++ +A+ GR EE +DL + + G+ ++ C+ + A G+ +H +K
Sbjct: 388 GMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKA 447
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
G + +V NALI +YGK +++ + +F+ + K+ VSWN+ I + + + ++A +F
Sbjct: 448 GCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIF 507
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
+ D V+SW+ +I A+A RG+EA++ F+ M NS ++ LLSV
Sbjct: 508 DNMLSRD--------VVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSV 559
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
C + +G++IH ++ M+ ++V N L++MY KCGC + H VF+ +E++D+ TW
Sbjct: 560 CGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGC-ADSHKVFDSMEERDIFTW 618
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
N+ I+G +GLG A+ +E M G P+ V FV +L+ACSHAGLV+EG + F M R
Sbjct: 619 NTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSR 678
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
++ + P +EHYACMVDLLGR G +Q A + +MP+EP+ +W LL +C++HKN ++
Sbjct: 679 DYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGR 738
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI 661
A ++F G+Y++LSNIY++ G W + A++R K +G+ K G SW++++ K+
Sbjct: 739 RAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKV 798
Query: 662 HMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
H F +G+ ++ + L++L + G VPD + +L
Sbjct: 799 HSFVTGDKQHEKIEEIDYTLQDLYTLLRGTGYVPDTEFVL 838
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 143/541 (26%), Positives = 236/541 (43%), Gaps = 97/541 (17%)
Query: 66 AARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
+AR+ + AR GRL +AR VF+ P + WNS++ ++G+ E+A L+
Sbjct: 37 SARIREL-ARLGRLREAREVFDAMP---HRDIIAWNSMISAYCNSGMLEDARILF----- 87
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF-QGNVHIVNELIGMYAKM 184
D + V A + + G+++ + G + N N ++ Y +
Sbjct: 88 -----DAISGGNVRTATILLSGYA---RLGRVLDARRVFDGMPERNTVAWNAMVSCYVQN 139
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G ++ + +LFD + ++ SWN M +G+ + A LFK+M + N VTWT ++
Sbjct: 140 GDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMP----QRNLVTWTVMI 195
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
S + R + + D+F MM G A VLS L + +V+ V+K GFE
Sbjct: 196 SGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFE 255
Query: 305 DYVFVK---------------------------------------------NALICVYGK 319
V + +A I VYG+
Sbjct: 256 SDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGR 315
Query: 320 H------------------GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
G + A+ LF +I + +VSWNA+IT Y + G+ DEA E+F
Sbjct: 316 DPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELF 375
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
+ M N ISW+ +I +A NGR EEALDL + + ++ + +++
Sbjct: 376 DR--------MPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLA 427
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
C+ AL GR++H V+ N V N L++MY KC +E VF ++ KD ++W
Sbjct: 428 CSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSW 487
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
NS I+ N + E+A F+ M+ D V++ ++SA + A +E F M+
Sbjct: 488 NSFIAALVQNNMLEDARHIFDNMLSR----DVVSWTTIISAYAQAERGDEAVEFFKTMLH 543
Query: 542 E 542
E
Sbjct: 544 E 544
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 186/369 (50%), Gaps = 26/369 (7%)
Query: 38 LQQCKTIHQLKQVHNQL---IVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCK 94
L +C I + + + Q+ IV NA +++ Y + G + +A+ +F+ PF
Sbjct: 331 LARCGRITEARILFEQIPDPIVVSWNA-------MITGYMQNGMVDEAKELFDRMPF--- 380
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
+++ W ++ NG E AL L + + G+L + AC +G+
Sbjct: 381 RNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGAL----ET 436
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ VH+ ++ G Q N ++ N LI MY K M ++F+++RVK+ +SWN +
Sbjct: 437 GRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQ 496
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
N + A +F M L + V+WT+++S++A+ R +E ++ F M + +
Sbjct: 497 NNMLEDARHIFDNM----LSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPI 552
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ ++LSVC L + +G+ IH IK G + + V NAL+ +Y K G + +F +E
Sbjct: 553 LTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SHKVFDSME 611
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
E++I +WN IT A+ GL EA++++ +E + G + PN +++ ++ A + G +
Sbjct: 612 ERDIFTWNTFITGCAQHGLGREAIKMYEHMESV--GVL--PNEVTFVGLLNACSHAGLVD 667
Query: 395 EALDLFRKM 403
E F+ M
Sbjct: 668 EGWQFFKSM 676
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/410 (20%), Positives = 179/410 (43%), Gaps = 66/410 (16%)
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP-NFVTW 240
A++G++ ++ ++FD + ++ I+WN M S + C+ + R+ + + N T
Sbjct: 44 ARLGRLREAREVFDAMPHRDIIAWNSMISAY-----CNSGMLEDARILFDAISGGNVRTA 98
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
T LLS +AR GR+ + +FD M +R
Sbjct: 99 TILLSGYARLGRVLDARRVFDGMPERN--------------------------------- 125
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
NA++ Y ++GD+ +A+ LF + +++ SWN+++T Y + +A +
Sbjct: 126 ------TVAWNAMVSCYVQNGDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNL 179
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
F Q M + N+++W+ +I + + + D+FR M + + +LS
Sbjct: 180 FKQ--------MPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLS 231
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK-CGCLEEGHLVFEQIEKKDLI 479
L + + V++ ++++ +LN+Y + L+ F+ + +++
Sbjct: 232 AVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEY 291
Query: 480 TWNSMISGYGMNGLGENALATF-EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
TW++MI+ G + A+A + + +++ P A + L+ C G + E R +F+
Sbjct: 292 TWSTMIAALSHGGRIDAAIAVYGRDPVKS--IPSQTALLTGLARC---GRITEARILFEQ 346
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ +P + + M+ + G++ EA ++ MP N W ++
Sbjct: 347 IP-----DPIVVSWNAMITGYMQNGMVDEAKELFDRMPFR-NTISWAGMI 390
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 112/252 (44%), Gaps = 26/252 (10%)
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
+A I A G EA EVF +M ++I+W+++I A+ ++G E+A LF
Sbjct: 37 SARIRELARLGRLREAREVFD--------AMPHRDIIAWNSMISAYCNSGMLEDARILFD 88
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM-NKNILVQNGLLNMYMKC 460
+ V ++ +SG +GR + V M +N + N +++ Y++
Sbjct: 89 AISGGNVRTATILLSGY---------ARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQN 139
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
G + +F+ + +D+ +WNSM++GY + +A F++M + V + ++
Sbjct: 140 GDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNL----VTWTVMI 195
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACM---VDLLGRAGLLQEASDIVKNMPM 577
S +G IF MM E P ++A + V L G+L+ +V
Sbjct: 196 SGYVRIEQHGKGWDIFRMMHHE-GASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGF 254
Query: 578 EPNAYVWGTLLN 589
E + + ++LN
Sbjct: 255 ESDVVIGTSILN 266
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 210/664 (31%), Positives = 350/664 (52%), Gaps = 59/664 (8%)
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
AR+VF+ P K S +LWN ++R +G ++ ++ LY+ M +LGV FTFP +++A
Sbjct: 60 ARHVFDQIP---KPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKA 116
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV--RV 199
C + + + G+++H H +G ++++ L+ MYAK G + + LF+ + +
Sbjct: 117 CSSLQALQL----GRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQD 172
Query: 200 KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE---- 255
++ ++WN M + F+ + + +M+ G+ PN T S+L + + L +
Sbjct: 173 RDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAI 232
Query: 256 ---------------TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
L DM K + A I ++ D+ M I G+V+
Sbjct: 233 HAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAM---IGGYVLH 289
Query: 301 GGFEDYVFVKNALICVYG----------------KHGDVKVAQNLFSEIEEK----NIVS 340
D + + + ++C+YG + D+K + L + + +
Sbjct: 290 DSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTV 349
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
N+LI+ YA+ G+ D AV ++ D +S+SA+I NG E+AL +F
Sbjct: 350 GNSLISMYAKCGIMDNAVGFLDEMIAKD--------TVSYSAIISGCVQNGYAEKALLIF 401
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
R+MQ + + T+ LL C+ AAL G HG+ V + + N +++MY KC
Sbjct: 402 RQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKC 461
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
G + +F++++ +D+I+WN+MI GYG++GL AL+ F+E+ G KPD V +AVL
Sbjct: 462 GKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVL 521
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
SACSH+GLV EG+ F M + F I+P+M HY CMVDLL RAG L EA ++ MP PN
Sbjct: 522 SACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPN 581
Query: 581 AYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRIS 640
+WG LL +CR HKN ++ E ++ +I L E TG+++L+SNIY++ GRW+DAA +R
Sbjct: 582 VRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSI 641
Query: 641 AKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
+ G KK G SW+E+ IH+F G+ ++ + L+EL +QM+ G D+ +
Sbjct: 642 QRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFV 701
Query: 701 LWEM 704
L ++
Sbjct: 702 LHDV 705
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 206/458 (44%), Gaps = 61/458 (13%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
+T N+S L + Q +HQ K +H I + L +L +YA+ LF AR
Sbjct: 206 VTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYAR 265
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL-GVLGDGFTFPLVIRAC 142
+F T K + + W++++ V + +AL LY M + G+ T ++RAC
Sbjct: 266 KIFNTVN---KKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRAC 322
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ + G+ +H H+++ G + + N LI MYAK G M ++ D++ K+
Sbjct: 323 AQLTDLK----RGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDT 378
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
+S++ + SG N + AL +F++M+ G+ P T +LL +
Sbjct: 379 VSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPA---------------- 422
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
C+ LAA G HG+ + GF + + NA+I +Y K G
Sbjct: 423 -------------------CSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGK 463
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
+ +++ +F ++ ++I+SWN +I Y GLC EA+ +F +L+ L +P+ ++ A
Sbjct: 464 ITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALG----LKPDDVTLIA 519
Query: 383 VIGAFASNGRGEEALDLFRKMQ----LAKVVANSVTISGLLSVCAESAALNIGREIHGHV 438
V+ A + +G E F M + +A+ + + LL A + L+ E + +
Sbjct: 520 VLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLL---ARAGNLD---EAYTFI 573
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
R+ N+ + LL +E G EQ+ KK
Sbjct: 574 QRMPFVPNVRIWGALLAACRTHKNIEMG----EQVSKK 607
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 186/489 (38%), Positives = 298/489 (60%), Gaps = 10/489 (2%)
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
+ N +W S+++ AR G E + F MRK ++ + C+ L H G+
Sbjct: 38 KTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQ 97
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
H + GFE +FV +AL+ +Y K G+++ A+ LF EI +NIVSW ++IT Y +
Sbjct: 98 AHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDD 157
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM-QLAKVVANS 412
A+ VF DG M +VISW+++I +A NG E++++F +M + ++ N+
Sbjct: 158 AHRALRVF------DG--MAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNA 209
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
VT+S +L CA S + +G+ IH V+++ + N+ V +++MY KCG +E F++
Sbjct: 210 VTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDR 269
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+ +K++ +W++M++GYGM+G + AL F EM AG KP+ + FV+VL+ACSHAGL+ EG
Sbjct: 270 MREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG 329
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
F M EF +EP +EHY CMVDLLGRAG L+EA D++K M + P+ VWG LL +CR
Sbjct: 330 WHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACR 389
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
MHKN D+ E A ++F L + G Y+LLSNIYA +GRWED ++RI K GL K G
Sbjct: 390 MHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGF 449
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKR 712
S +++K ++H+F G+ + + E LE+L+++++ G VPD +L + +G + +
Sbjct: 450 SLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHD-VGHEEKEM 508
Query: 713 IQRIRADNI 721
+ R+ ++ +
Sbjct: 509 VLRVHSEKL 517
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 170/329 (51%), Gaps = 25/329 (7%)
Query: 76 FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
F + D NVF WNS++ +G AL+ + MRKL + + TF
Sbjct: 32 FNKYVDKTNVFS------------WNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTF 79
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
P I++C + G+ H L GF+ ++ + + L+ MY+K G++ D+ LFD
Sbjct: 80 PCAIKSCSAL----LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFD 135
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ +N +SW M +G+ N D AL +F M E + ++W S+++ +A+ G E
Sbjct: 136 EISHRNIVSWTSMITGYVQNDDAHRALRVFDGMA----ERDVISWNSIIAVYAQNGMSTE 191
Query: 256 TMDLFDMMRKRG-IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
+M++F M K G I A ++ VL CA + +GK IH VIK G E VFV ++I
Sbjct: 192 SMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSII 251
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
+Y K G V++A+ F + EKN+ SW+A++ Y G EA+EVF ++ + +
Sbjct: 252 DMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNM----AGVK 307
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKM 403
PN I++ +V+ A + G EE F+ M
Sbjct: 308 PNYITFVSVLAACSHAGLLEEGWHWFKAM 336
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 170/363 (46%), Gaps = 48/363 (13%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
N S C +H +Q H Q ++ G F+++ ++ +Y++ G L DAR +F
Sbjct: 75 NRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLF 134
Query: 87 ETAP--------------------------FD--CKSSSLLWNSILRVNVSNGLYENALK 118
+ FD + + WNSI+ V NG+ +++
Sbjct: 135 DEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESME 194
Query: 119 LYVKMRKLGVLG-DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNEL 177
++ +M K G + + T V+ AC GS R G+ +H+ V++MG + NV + +
Sbjct: 195 IFHRMVKDGEINYNAVTLSAVLLACAHSGSQRL----GKCIHDQVIKMGLESNVFVGTSI 250
Query: 178 IGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNF 237
I MY K G++ + K FD++R KN SW+ M +G+ ++ ALE+F M + G++PN+
Sbjct: 251 IDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNY 310
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
+T+ S+L++ + G LEE F M +E G E ++ + G +
Sbjct: 311 ITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLG-----RAGYLKEA 365
Query: 297 FVIKGGFE---DYVFVKNALICVYGKHGDVKV----AQNLFSEIEEKNIVSWNALITSYA 349
F + G + D+V V AL+ H +V + A+ LF E++ KN + L YA
Sbjct: 366 FDLIKGMKLRPDFV-VWGALLGACRMHKNVDLGEISARKLF-ELDPKNCGYYVLLSNIYA 423
Query: 350 EAG 352
+AG
Sbjct: 424 DAG 426
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 131/281 (46%), Gaps = 14/281 (4%)
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
+++ NV SW++VI A +G EAL F M+ + N T + C+ L+ G
Sbjct: 36 VDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSG 95
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
R+ H + ++ V + L++MY KCG L + +F++I +++++W SMI+GY N
Sbjct: 96 RQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQN 155
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
AL F+ M E D +++ ++++ + G+ E IF MV++ I
Sbjct: 156 DDAHRALRVFDGMAER----DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVT 211
Query: 552 YACMVDLLGRAG---LLQEASDIVKNMPMEPNAYVWGTLLN-SCRMHKNTDVAEAMASQI 607
+ ++ +G L + D V M +E N +V ++++ C+ K MA +
Sbjct: 212 LSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGK-----VEMARKA 266
Query: 608 FGLITE-TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
F + E S+ + Y G ++A +V G+K
Sbjct: 267 FDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVK 307
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 220/739 (29%), Positives = 377/739 (51%), Gaps = 116/739 (15%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F+ + + C I+ KQ+H L+V G L +++++YA G L + F+
Sbjct: 54 FNLVFRSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQ--- 110
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKL-GVLGDGFTFPLVIRACKFMGSFRFRF 152
+ + WNS++ V G Y +++ ++ L GV D +TFP V++AC
Sbjct: 111 RKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC-------LSL 163
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
+ G+ +H VL+MGF+ +V++ LI +Y++ G + + K+F + V++ SWN M SGF
Sbjct: 164 ADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGF 223
Query: 213 ALNFDCDGALELFKRMELE-----------------------------------GLEPNF 237
N + AL + RM+ E GLE +
Sbjct: 224 CQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDV 283
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKR------------------------------- 266
+L++ +++ GRL++ +FD M R
Sbjct: 284 FVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFV 343
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF-EDYVFVKNALICVYGKHGDVKV 325
G+ + + S+ L+ +G+ +HGFV++ + E + + NAL+ +Y K G +
Sbjct: 344 GMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDC 403
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A+ +F ++ ++++SWN LIT YA+ GL EA++ ++ +E+ G PN +W +++
Sbjct: 404 ARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEE---GRTIVPNQGTWVSILP 460
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
A++ G AL G +IHG +++ +
Sbjct: 461 AYSHVG-----------------------------------ALQQGMKIHGRLIKNCLFL 485
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
++ V L++MY KCG LE+ +F +I ++ + WN++IS G++G GE AL F++M
Sbjct: 486 DVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMR 545
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
G K D + FV++LSACSH+GLV+E + FD M +E+RI+P ++HY CMVDL GRAG L
Sbjct: 546 ADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGYL 605
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
++A ++V NMP++ +A +WGTLL +CR+H N ++ + ++ + +E G Y+LLSNIY
Sbjct: 606 EKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIY 665
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A G+WE A KVR A+ +GL+K G S + V + +F +GN + E L L
Sbjct: 666 ANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQSHPQCAEIYEELRVLN 725
Query: 686 LQMENKGCVPDNDIILWEM 704
+M++ G VPD +L ++
Sbjct: 726 AKMKSLGYVPDYSFVLQDV 744
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 148/603 (24%), Positives = 265/603 (43%), Gaps = 115/603 (19%)
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
F LV R+C + + +H +L +G +V ++ +L+ +YA +G +S S F
Sbjct: 54 FNLVFRSCT-------NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTF 106
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
++ KN SWN S++S++ R GR
Sbjct: 107 KHIQRKNIFSWN-----------------------------------SMVSAYVRRGRYR 131
Query: 255 ETMD-LFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
++MD + +++ G+ VL C LA G+ +H +V+K GFE V+V +L
Sbjct: 132 DSMDCVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLKMGFEHDVYVAASL 188
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
I +Y + G V+VA +F ++ ++
Sbjct: 189 IHLYSRFGAVEVAHKVFVDMPVRD------------------------------------ 212
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
V SW+A+I F NG EAL + +M+ +V ++VT+S +L +CA+S + G
Sbjct: 213 ---VGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVL 269
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+H +V++ + ++ V N L+NMY K G L++ VF+ +E +DL++WNS+I+ Y N
Sbjct: 270 VHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDD 329
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
AL F+EM+ G +PD + V++ S GR + +VR +E +
Sbjct: 330 PVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGN 389
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
+V++ + G + A + + +P + W TL+ T A+ GL +E
Sbjct: 390 ALVNMYAKLGSIDCARAVFEQLPSR-DVISWNTLI--------TGYAQN------GLASE 434
Query: 614 TTGSYMLLS---NIYAASGRWED--AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
+Y ++ I G W A + A +G+K + G+ +K + +
Sbjct: 435 AIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMK-IHGRL---IKNCLFLDVFVA 490
Query: 669 SLQSDLKNVCEVLEE---LALQMENKGCVPDNDIIL---WEMMGKKNVKRIQRIRADNIK 722
+ D+ C LE+ L ++ + VP N II G+K ++ + +RAD +K
Sbjct: 491 TCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVK 550
Query: 723 SKH 725
+ H
Sbjct: 551 ADH 553
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 111/243 (45%), Gaps = 16/243 (6%)
Query: 29 SLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
S+L + H+ + Q ++H +LI F+A ++ +Y + GRL DA ++F
Sbjct: 457 SILPAYSHV----GALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYE 512
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
P + +S+ WN+I+ +G E AL+L+ MR GV D TF ++ AC G
Sbjct: 513 IP---QETSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLV 569
Query: 149 -RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WN 206
++ F + + + + N+ ++ ++ + G + ++ L + ++ S W
Sbjct: 570 DEAQWCFDTMQKEYRI----KPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWG 625
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRK 265
+ + A + L F L ++ V + LLS+ +A G+ E + + + R
Sbjct: 626 TLLA--ACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARD 683
Query: 266 RGI 268
RG+
Sbjct: 684 RGL 686
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 214/711 (30%), Positives = 355/711 (49%), Gaps = 77/711 (10%)
Query: 29 SLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
SL + + LL+ C+ K++H +I N FL ++S YA+F R+ AR VF+
Sbjct: 13 SLSNHYCELLKHCRDT---KKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQ 69
Query: 89 AP----------------FDC------------KSSSLLWNSILRVNVSNGLYENALKLY 120
P C + WNS++ G ++K Y
Sbjct: 70 MPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAY 129
Query: 121 VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
M G + + + S + G VH HV++ GFQ V + + L+ M
Sbjct: 130 NLMLYNGPFNLN---RIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDM 186
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
Y+K G + + + FD++ KN + +N + +G + + +LF M+ E + ++W
Sbjct: 187 YSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQ----EKDSISW 242
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
T++++ + G E +DLF MR +E+ VL+ C + A GK +H ++I+
Sbjct: 243 TAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIR 302
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
++D +FV +AL+ +Y K +K A+ +F ++ KN+VSW A++ Y + G +EAV++
Sbjct: 303 TDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKI 362
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
F ++ +NG + + T+ ++S
Sbjct: 363 FCDMQ-----------------------NNG----------------IEPDDFTLGSVIS 383
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
CA A+L G + H + + I V N L+ +Y KCG +E+ H +F ++ D ++
Sbjct: 384 SCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVS 443
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
W +++SGY G L FE M+ GFKPD V F+ VLSACS AGLV +G +IF+ M+
Sbjct: 444 WTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMI 503
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
+E RI P +HY CM+DL RAG L+EA + MP P+A W +LL+SCR H+N ++
Sbjct: 504 KEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIG 563
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
+ A + L T SY+LLS+IYAA G+WE+ A +R + KGL+K G SWI+ K +
Sbjct: 564 KWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQ 623
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVK 711
+H+FS+ + + LE+L +M +G VPD + +L ++ + +K
Sbjct: 624 VHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIK 674
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 216/682 (31%), Positives = 350/682 (51%), Gaps = 95/682 (13%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
LL+ + + H +++ + FL ++S YAR GRL DAR VF+ P +
Sbjct: 26 LLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPL---RN 82
Query: 97 SLLWNSIL-------RVNVSNGLYE--------------------------NALKLYVKM 123
+ +N++L R + + L+E +AL+ M
Sbjct: 83 TFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAM 142
Query: 124 RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
+ + ++F + AC R G+ VH V + +VHI + L+ MYAK
Sbjct: 143 HADDFVLNAYSFASALSACAAEKDSRT----GEQVHGLVARSPHADDVHIRSALVDMYAK 198
Query: 184 MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
+ D+ ++FD + E N V+W SL
Sbjct: 199 CERPEDARRVFDAMP-----------------------------------ERNVVSWNSL 223
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK-GG 302
++ + + G + E + LF M G ++ V+S CA LAAD G+ +H ++K
Sbjct: 224 ITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDR 283
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
D + + NAL+ +Y K G A+ +F + ++IVS +++T YA++ ++A VFS
Sbjct: 284 LRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFS 343
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
Q M NVI+W+ +I A+A NG EEA+ LF +++ + T +L+ C
Sbjct: 344 Q--------MVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNAC 395
Query: 423 AESAALNIGREIHGHVVRVSM------NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
A L +G++ H HV++ ++ V N L++MY+K G +++G VFE++ +
Sbjct: 396 GNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR 455
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D ++WN+MI GY NG ++AL FE M+ + PD V + VLSAC H+GLV+EGRR F
Sbjct: 456 DNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYF 515
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
M + I P +HY CMVDLLGRAG L+EA +++ +MPMEP++ +W +LL +CR+HKN
Sbjct: 516 HSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWASLLGACRLHKN 575
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
++ E A ++F L + +G Y+LLSN+YA G+W + +VR S K +G+ K G SWIE
Sbjct: 576 VELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCSWIE 635
Query: 657 VKRKIHMFSSGNSLQSDLKNVC 678
+ RK+++F L D ++ C
Sbjct: 636 IGRKMNVF-----LARDKRHPC 652
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 44/236 (18%)
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
++VA+ S L + + L+ R H +++ + + N L++ Y + G L +
Sbjct: 12 ELVAHLRASSPLADLLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDA 71
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
VF++I ++ ++N+++S Y G + A A FE + + PD ++ AV++A
Sbjct: 72 RRVFDEIPLRNTFSYNALLSAYARLGRPDEARALFEAIPD----PDQCSYNAVVAA---- 123
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
L GR H A + L A D V NAY + +
Sbjct: 124 -LARHGR----------------GHAADALRFLA----AMHADDFVL------NAYSFAS 156
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGS-----YMLLSNIYAASGRWEDAAKV 637
L++C K++ E Q+ GL+ + + L ++YA R EDA +V
Sbjct: 157 ALSACAAEKDSRTGE----QVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRV 208
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 209/675 (30%), Positives = 363/675 (53%), Gaps = 59/675 (8%)
Query: 18 SRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAAR--VLSIYAR 75
S+P + T ++ LL+ CK++ LKQ+ Q++ TG + S + V
Sbjct: 19 SKPLHLSTSSHFTKKSCIFLLKNCKSMQHLKQIQTQILRTGFHQSGDTLNKFMVCCTDPS 78
Query: 76 FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
G L A +F ++N +++ NG + A+ L+ ++R+ G+ D FT+
Sbjct: 79 IGNLHYAERIFNYIDI---PGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTY 135
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
P V +A +G R G+ V+ V++ G + + ++ N L+ MYA++G++ + ++F+
Sbjct: 136 PFVFKAIGCLGEVRE----GEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFE 191
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ ++ +SWN+ L+S + +C R E+
Sbjct: 192 EMPQRDVVSWNV-----------------------------------LISGYVKCRRYED 216
Query: 256 TMDLFDMMRKRGIEVGAEAIAV-VLSVCADLAADHMGKVIHGFVIKG-GFEDYVFVKNAL 313
+D+F M+++ EA V LS C L +GK IH +V + GF + + NAL
Sbjct: 217 AVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLGFT--IKIGNAL 274
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ +Y K G + +A+ +F+++ K ++ W ++++ Y G DEA E+F + D
Sbjct: 275 VDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRD----- 329
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
V+ W+A+I + R ++A+ LFR+MQ+ +V + T+ LL+ CA+ L G+
Sbjct: 330 ---VVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKW 386
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
IHG++ + + +V L+ MY KCG +E+ +F +++KD +W S+I G MNG
Sbjct: 387 IHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGK 446
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
AL F EM++ G KPD + F+ VLSACSH GLV EGR+ F M ++IEP++EHY
Sbjct: 447 TSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYG 506
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYV---WGTLLNSCRMHKNTDVAEAMASQIFGL 610
C++DLLGRAG L EA ++++ P N + +G LL++CR H N ++ E +A ++ G+
Sbjct: 507 CLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGI 566
Query: 611 ITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSL 670
+ + + LL+NIYA++ RWED KVR K G+KKV G S +EV +H F G++
Sbjct: 567 ESGDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVGDAS 626
Query: 671 QSDLKNVCEVLEELA 685
+++ + +L+ +A
Sbjct: 627 HPEMREIYSMLDSIA 641
>gi|357490817|ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517031|gb|AES98654.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 235/745 (31%), Positives = 383/745 (51%), Gaps = 89/745 (11%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
ITY N L C D + C I K++H+++ + N + F+ +++S+YA+ G L AR
Sbjct: 84 ITYMNLLQSCID---KDCIFIG--KELHSRIGLV-ENVNPFVETKLVSMYAKCGLLGMAR 137
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
VF + W++++ N + + L+ M + GVL D F P V++AC
Sbjct: 138 KVFNEMSV---RNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPDEFLLPKVLQAC- 193
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
G R G+++H+ V++ G + + H+ N ++ +YAK G+M + K+FD + ++ +
Sbjct: 194 --GKCR-DLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSV 250
Query: 204 SWNMMFSGFALN---------FD--------------------------CDGALELFKRM 228
+WN M SGF N FD CD A++L ++M
Sbjct: 251 AWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKM 310
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E G+ P+ TWTS++S + GR+ +DL M G+E IA S CA L +
Sbjct: 311 EWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSL 370
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
MG IH +K D V V N+LI +Y K GD+K AQ++F + E+++ SWN++I Y
Sbjct: 371 SMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGY 430
Query: 349 AEAGLCDEAVEVFSQLEKLDG------------GSME--------------------RPN 376
+AG C +A E+F ++++ D G M+ + N
Sbjct: 431 FQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRN 490
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
SW+++I F +G+ ++AL +FR MQ ++ NSVTI +L VCA A +EIH
Sbjct: 491 AASWNSLISGFVQSGQKDKALQIFRNMQFCHILPNSVTILSILPVCANLVASKKVKEIHC 550
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
VR + + V N L++ Y K G L +F ++ KD ++WNSM+S Y ++G E+
Sbjct: 551 FAVRRILVSELSVSNLLIDSYAKSGNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSES 610
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
AL F +M + G +P+ F ++L A HAG+V+EG+ +F + +++ + MEHY+ MV
Sbjct: 611 ALDLFYQMRKQGLQPNRGTFASILLAYGHAGMVDEGKSVFSCITKDYLVRQGMEHYSAMV 670
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
LLGR+G L EA D +++MP+EPN+ VWG LL +CR+H+N VA ++
Sbjct: 671 YLLGRSGKLAEALDFIQSMPIEPNSSVWGALLTACRIHRNFGVAVLAGKRMLEFEPGNNI 730
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKN 676
+ LLS Y+ G++E + K + K GQSWIE +H F G+ L
Sbjct: 731 TRHLLSQAYSLCGKFEPEGE-------KAVNKPIGQSWIERNNVVHTFVVGDQSNPYLDK 783
Query: 677 VCEVLEELALQMENKGCVPDNDIIL 701
+ L+ +A+ ++ V DN++ +
Sbjct: 784 LHSWLKRVAVNVKTH--VSDNELYI 806
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 146/327 (44%), Gaps = 45/327 (13%)
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
G L E + + D + ++G V +L C D +D +F+
Sbjct: 62 GSLSEAVTILDSLAEQGCRVKPITYMNLLQSCID-------------------KDCIFIG 102
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
L H + + +N+ +E K L++ YA+ GL A +VF++
Sbjct: 103 KEL------HSRIGLVENVNPFVETK-------LVSMYAKCGLLGMARKVFNE------- 142
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
M N+ +WSA+IG + N E + LF M V+ + + +L C + L
Sbjct: 143 -MSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPDEFLLPKVLQACGKCRDLET 201
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
GR IH V+R M + ++N ++ +Y KCG ++ +F+ ++++D + WN+MISG+
Sbjct: 202 GRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQ 261
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM--VREFRIEPQ 548
NG A F+ M + G +P V + ++S + G + D+M + F I P
Sbjct: 262 NGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLA---IDLMRKMEWFGIAPD 318
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNM 575
+ + M+ + G + A D++K M
Sbjct: 319 VYTWTSMISGFTQKGRISHALDLLKEM 345
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 1/152 (0%)
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
NG EA+ + + +T LL C + + IG+E+H + V N N V
Sbjct: 61 NGSLSEAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKELHSRIGLVE-NVNPFV 119
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
+ L++MY KCG L VF ++ ++L TW++MI G N + F M+ G
Sbjct: 120 ETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGV 179
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
PD VL AC + GR I M++R
Sbjct: 180 LPDEFLLPKVLQACGKCRDLETGRLIHSMVIR 211
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 198/576 (34%), Positives = 319/576 (55%), Gaps = 64/576 (11%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H + + N + +L+ YA G+ + K+FD++ +N + +N+M + N
Sbjct: 40 LHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHR 99
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
D L +F+ M G P+ T+
Sbjct: 100 YDDGLLVFREMVNGGFRPDNYTY-----------------------------------PC 124
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
VL C+ G +IHG V+K G + +FV N LI +YGK G + A+ +F E+ K+
Sbjct: 125 VLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKD 184
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLE----KLDGGSM--------------------- 372
+VSWN+++ YA D+A+E+ ++E K DG +M
Sbjct: 185 VVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKI 244
Query: 373 ----ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
ER N+ISW+ +I + N +A+DL+ +M+ +V +++T + +L C + +AL
Sbjct: 245 FVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSAL 304
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+GR IH +V + + N+L++N L++MY +CGCL++ VF++++ +D+ +W S+IS Y
Sbjct: 305 LLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAY 364
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
GM G G NA+A F EM+ +G PD +AFVA+LSACSH+GL++EGR F M ++RI P+
Sbjct: 365 GMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPR 424
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
+EHYAC+VDLLGRAG + EA +I+K MP+EPN VW TLL+SCR+ N D+ A +
Sbjct: 425 IEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLL 484
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L E +G Y+LLSNIYA +GRW++ ++R K K ++K G S +E+ ++H F +G+
Sbjct: 485 QLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELNNQVHTFLAGD 544
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ K + E L L +M+ G VP+ D L ++
Sbjct: 545 TSHPQSKEIYEELGVLVAKMKELGYVPETDSALHDV 580
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 199/399 (49%), Gaps = 44/399 (11%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
L Q I LK++H + ++ + L +++ YA G R VF+ +
Sbjct: 28 LDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMS---DRNV 84
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
+ +N ++R V+N Y++ L ++ +M G D +T+P V++AC + R+ G +
Sbjct: 85 VFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRY----GLL 140
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H VL++G N+ + N LI MY K G + ++ ++FD++ K+ +SWN M +G+A N
Sbjct: 141 IHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMR 200
Query: 218 CDGALELFKRMELEGLEP---------------------------------NFVTWTSLL 244
D ALE+ + ME G +P N ++W ++
Sbjct: 201 FDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMI 260
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
+ + + +DL+ M K +E A A VL C DL+A +G+ IH +V K
Sbjct: 261 RVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLC 320
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
+ ++N+LI +Y + G + A+ +F ++ +++ SW +LI++Y G AV +F+++
Sbjct: 321 PNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEM 380
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
L+ G + P+ I++ A++ A + +G +E F++M
Sbjct: 381 --LNSG--QAPDSIAFVAILSACSHSGLLDEGRIYFKQM 415
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 203/609 (33%), Positives = 331/609 (54%), Gaps = 71/609 (11%)
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
KS+ WNS++ G AL+ + +RKLG++ +FP I++C +
Sbjct: 1977 KSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL----V 2032
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G++ H GF+ ++ + + LI MY+K GQ+ D+ LFD++ ++N +SW M +G+
Sbjct: 2033 SGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYV 2092
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
N D AL LFK LEE ++ D + + +
Sbjct: 2093 QNEQADNALLLFKDF------------------------LEEETEVED---GNNVPLDSV 2125
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ VLS C+ ++ + + +HGFV+K GF+ + V N L+ Y K G V++ +F
Sbjct: 2126 VMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFD-- 2183
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
W ME + ISW+++I +A +G
Sbjct: 2184 -------W------------------------------MEEKDDISWNSMIAVYAQSGLS 2206
Query: 394 EEALDLFRKM-QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
EAL++F M + V N+VT+S +L CA + AL G+ IH V+++ + N+ V
Sbjct: 2207 GEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS 2266
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
+++MY KCG +E F+++++K++ +W +M++GYGM+G + AL F +M+ AG KP+
Sbjct: 2267 IIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPN 2326
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
+ FV+VL+ACSHAGLV EG F+ M ++ IEP +EHY CMVDL GRAG L EA +++
Sbjct: 2327 YITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLI 2386
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
K M M+P+ VWG+LL +CR+HKN D+ E A ++F L + G Y+LLSN+YA +GRW
Sbjct: 2387 KRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWA 2446
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
D ++R+ K + L K G S +E+K ++H+F G+ + + + LE+L L+++ G
Sbjct: 2447 DVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIG 2506
Query: 693 CVPDNDIIL 701
VP+ +L
Sbjct: 2507 YVPNMTSVL 2515
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 220/459 (47%), Gaps = 55/459 (11%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H +++ G + + +LI +Y+ G+++ + LF +++ +WN++ +N
Sbjct: 46 IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN-- 103
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
G E+ + L+ M +GI
Sbjct: 104 ---------------------------------GLSEQALMLYKNMVCQGIAADKFTFPF 130
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
V+ C + + +GKV+HG +IK GF VFV+N LI Y K G + A +F ++ +N
Sbjct: 131 VIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRN 190
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
+VSW +I+ G EA +F ++ NV+SW+A+I + N + EEAL
Sbjct: 191 VVSWTTVISGLISCGDLQEARRIFDEIPS--------KNVVSWTAMINGYIRNQQPEEAL 242
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
+LF++MQ + N T+ L+ C E L +GR IH + ++ + + + L++MY
Sbjct: 243 ELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMY 302
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG +++ VFE + +K L TWNSMI+ G++GLG+ AL F EM KPD + F+
Sbjct: 303 SKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFI 362
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
VL AC H V EG F M + + I P EHY CM +L R+ L EA K +
Sbjct: 363 GVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV-- 420
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
G+L NS + + + +Q L+ +TTG
Sbjct: 421 -------GSLANSPSICFDARAKQVAWTQ---LLFDTTG 449
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/400 (31%), Positives = 204/400 (51%), Gaps = 22/400 (5%)
Query: 6 LHQPHQFSPSN--PSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASA 63
L H PS P P I +L LLQ CK L+Q+H ++I +G +
Sbjct: 5 LSYTHDVFPSKNIPLTPRGNIRAKKALF-----LLQNCKNFKHLRQIHAKIIRSGLSNDQ 59
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM 123
L +++ +Y+ GR+ A +F C + WN I+R N NGL E AL LY M
Sbjct: 60 LLTRKLIHLYSTHGRIAYAILLFYQIQNPC---TFTWNLIIRANTINGLSEQALMLYKNM 116
Query: 124 RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
G+ D FTFP VI+AC S G++VH +++ GF G+V + N LI Y K
Sbjct: 117 VCQGIAADKFTFPFVIKACTNFLSI----DLGKVVHGSLIKYGFSGDVFVQNNLIDFYFK 172
Query: 184 MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
G + K+F+K+RV+N +SW + SG C G L+ +R+ E N V+WT++
Sbjct: 173 CGHTRFALKVFEKMRVRNVVSWTTVISGL---ISC-GDLQEARRIFDEIPSKNVVSWTAM 228
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
++ + R + EE ++LF M+ I + ++ C ++ +G+ IH + IK
Sbjct: 229 INGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCI 288
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
E V++ ALI +Y K G +K A +F + K++ +WN++ITS GL EA+ +FS+
Sbjct: 289 EIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSE 348
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+E+++ +P+ I++ V+ A +E F +M
Sbjct: 349 MERVN----VKPDAITFIGVLCACVHIKNVKEGCAYFTRM 384
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 217/503 (43%), Gaps = 99/503 (19%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++ C + L + H Q V G F+++ ++ +Y++ G+L DAR +F+ P
Sbjct: 2018 FPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP 2077
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVK-MRKLGVLGDGFTFPL-------VIRAC 142
+ + W S++ V N +NAL L+ + + + DG PL V+ AC
Sbjct: 2078 L---RNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSAC 2134
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ + VH V++ GF G++ + N L+ YAK GQ S K+FD + K+
Sbjct: 2135 SRVSG----KGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDD 2190
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
ISWN M + +A + ALE+F M
Sbjct: 2191 ISWNSMIAVYAQSGLSGEALEVFH----------------------------------GM 2216
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
+R G+ A ++ VL CA A GK IH VIK E V V ++I +Y K G
Sbjct: 2217 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 2276
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
V++A+ F ++EKN+ SW A++ Y G EA+++F ++ + + +PN I++ +
Sbjct: 2277 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVR----AGVKPNYITFVS 2332
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS 442
V+ A + G EE F M+ + G E +G +V
Sbjct: 2333 VLAACSHAGLVEEGWHWFNAMK-------------------HKYDIEPGIEHYGCMV--- 2370
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE-KKDLITWNSMISGYGMN---GLGENAL 498
+++ + GCL E + + ++++ K D + W S++ ++ LGE A
Sbjct: 2371 ------------DLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAA 2418
Query: 499 ATFEEMIEAGFKPDGVAFVAVLS 521
E+ PD + +LS
Sbjct: 2419 QKLFEL-----DPDNCGYYVLLS 2436
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 158/314 (50%), Gaps = 27/314 (8%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH ++ G + S + ++ YA+ G+ ++ VF+ + + WNS++ V
Sbjct: 2146 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWME---EKDDISWNSMIAVYAQ 2202
Query: 110 NGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+GL AL+++ M R +GV + T V+ AC G+ R G+ +H+ V++M +
Sbjct: 2203 SGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRA----GKCIHDQVIKMDLE 2258
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
NV + +I MY K G++ + K FD+++ KN SW M +G+ ++ AL++F +M
Sbjct: 2259 YNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKM 2318
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGIEVGAEAIAVVLSV-----C 282
G++PN++T+ S+L++ + G +EE F+ M+ K IE G E ++ + C
Sbjct: 2319 VRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGC 2378
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV----AQNLFSEIEEKNI 338
+ A + +I +K F V +L+ H +V + AQ LF E++ N
Sbjct: 2379 LNEAYN----LIKRMKMKPDF----VVWGSLLGACRIHKNVDLGEIAAQKLF-ELDPDNC 2429
Query: 339 VSWNALITSYAEAG 352
+ L YA+AG
Sbjct: 2430 GYYVLLSNLYADAG 2443
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 139/326 (42%), Gaps = 57/326 (17%)
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
+++ NV SW++VI A G EAL F ++ ++ + + C+ L G
Sbjct: 1975 VDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSG 2034
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
R H ++ V + L++MY KCG L++ +F++I +++++W SMI+GY N
Sbjct: 2035 RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQN 2094
Query: 492 GLGENALATFEEMIEA--------GFKPDGVAFVAVLSACS-----------HAGLVNEG 532
+NAL F++ +E D V V+VLSACS H +V +G
Sbjct: 2095 EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKG 2154
Query: 533 ------------------------RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+++FD M + I + M+ + ++GL EA
Sbjct: 2155 FDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDIS-----WNSMIAVYAQSGLSGEA 2209
Query: 569 SDI----VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE---TTGSYMLL 621
++ V+++ + NA +L +C + + Q+ + E G+ ++
Sbjct: 2210 LEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSII- 2268
Query: 622 SNIYAASGRWEDAAKVRISAKTKGLK 647
++Y GR E A K K K +K
Sbjct: 2269 -DMYCKCGRVEMAKKTFDRMKEKNVK 2293
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%)
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
R+IH ++R ++ + L+ L+++Y G + L+F QI+ TWN +I +N
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
GL E AL ++ M+ G D F V+ AC++ ++ G+ + +++
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK 153
Score = 42.7 bits (99), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
++ ++K ++ +WNS+I+ G AL F + + G P +F + +CS +
Sbjct: 1972 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 2031
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
G R+ F E + + ++D+ + G L++A + +P+ N W +++
Sbjct: 2032 VSG-RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR-NVVSWTSMIT 2089
Query: 590 SCRMHKNTDVA 600
++ D A
Sbjct: 2090 GYVQNEQADNA 2100
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 215/726 (29%), Positives = 372/726 (51%), Gaps = 104/726 (14%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
LL+ C ++ +L Q +I G + +++S++ +FG L +A VF+ P + K
Sbjct: 83 LLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQ--PIEDKID 140
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
L ++++L+ N ++A+ + +MR GV + F +++ C R G+
Sbjct: 141 EL-YHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRK----GK 195
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H ++ GF NV + ++ MYAK + +++K+FD++ ++ + WN + SG+A N
Sbjct: 196 EIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNG 255
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
ALEL RM+ EG P+ +T I
Sbjct: 256 FGKTALELVLRMQEEGKRPDSIT-----------------------------------IV 280
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
+L AD+ + +G+ IHG+ ++ GFE +V V AL+ +Y K G V A+ +F + K
Sbjct: 281 SILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGK 340
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQL--EKL---------------DGGSMER----- 374
+VSWN++I Y + G A+E+F ++ E++ D G +E+
Sbjct: 341 TVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVH 400
Query: 375 ---------PNVISWSAVIGAFASNGRGEEALDLFRKMQ--------------------- 404
+V +++I ++ R + A ++F +Q
Sbjct: 401 KLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRIN 460
Query: 405 ----------LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
L + +S T+ ++ AE + L + IHG V+R ++KN+ V L+
Sbjct: 461 EAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALV 520
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCG + +F+ ++++ + TWN+MI GYG +GLG+ AL FE+M + KP+ V
Sbjct: 521 DMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEV 580
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F+ VLSACSH+GLV EG + F M +++ +EP M+HY MVDLLGRA L EA D ++
Sbjct: 581 TFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQK 640
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP+EP V+G +L +CR+HKN ++ E A++IF L + G ++LL+NIYA + W+
Sbjct: 641 MPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKV 700
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
A+VR + + KG++K G S +E++ ++H F SG + K + LE L +++ G +
Sbjct: 701 ARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYM 760
Query: 695 PDNDII 700
PD + +
Sbjct: 761 PDTNSV 766
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 369 bits (947), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 237/827 (28%), Positives = 397/827 (48%), Gaps = 149/827 (18%)
Query: 17 PSRPFSIITYNN-------SLLDCFDHLLQQCKTIHQLK---QVHNQLIVTGA---NASA 63
P RPF T++ S D +L+ C + L Q+H + +V+GA +
Sbjct: 11 PPRPFCSTTFSATAAVTDVSSADRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHL 70
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM 123
L R+L +Y R DA VF P +SSL WN ++R + G + A+ YVKM
Sbjct: 71 ALHTRLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKM 130
Query: 124 --RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
D T P V+++C +G+ S G++VH +G +V++ + L+ MY
Sbjct: 131 WSHPAAPSPDAHTLPYVVKSCAALGAM----SLGRLVHRTARAIGLANDVYVGSALVKMY 186
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
A G + ++ FD + ++ + WN+M G D DGA+ LF+ M G EPNF T
Sbjct: 187 ADAGLLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLA 246
Query: 242 -----------------------------------SLLSSHARCGRLEETMDLFDM---- 262
+LL+ +A+C L++ LF++
Sbjct: 247 CFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQD 306
Query: 263 ---------------------------MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
M++ G + + +L DL GK +H
Sbjct: 307 DLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVH 366
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
G++++ VF+ +AL+ +Y K DV++AQNL+ ++V + +I+ Y G+ +
Sbjct: 367 GYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSE 426
Query: 356 EAVEVFSQL----------------------------EKLDG----GSMERPNVISWSAV 383
EA+++F L +++ G + ER + SA+
Sbjct: 427 EALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVE-SAL 485
Query: 384 IGAFASNGRGEEALDLFRKM-QLAKVVANSV----------------------------- 413
+ +A GR + + +F KM Q +V NS+
Sbjct: 486 MDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNN 545
Query: 414 -TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
TIS LS CA A+ G+EIHG ++ + +I ++ L++MY KCG LE VFE
Sbjct: 546 ITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEF 605
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+ K+ ++WNS+IS YG +GL + +++ M E G+KPD V F+A++SAC+HAGLV EG
Sbjct: 606 MPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEG 665
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
++F M +++ I P+MEH+ACMVDL R+G L +A + +MP +P+A +WG LL++CR
Sbjct: 666 VQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACR 725
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
+H+N ++A+ + ++F L +G Y+L+SNI A +GRW+ +KVR K + K+ G
Sbjct: 726 VHRNVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGY 785
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDI 699
SW++V H+F + + + +++ L+ L ++ +G VP D+
Sbjct: 786 SWVDVNNSSHLFVASDKSHPESEDIYTSLKTLLQELREEGYVPRPDL 832
>gi|356551872|ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Glycine max]
Length = 945
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 226/719 (31%), Positives = 381/719 (52%), Gaps = 87/719 (12%)
Query: 19 RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQL-IVTGANASAFLAARVLSIYARFG 77
RP IT+ N L C D + C + +++H ++ +V N F+ +++S+YA+ G
Sbjct: 83 RP---ITFMNLLQACID---KDCILVG--RELHTRIGLVRKVNP--FVETKLVSMYAKCG 132
Query: 78 RLFDARNVFETAPFDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
L +AR VF+ + + +L W++++ + +E ++L+ M + GVL D F P
Sbjct: 133 HLDEARKVFD----EMRERNLFTWSAMIGACSRDLKWEEVVELFYDMMQHGVLPDDFLLP 188
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
V++AC G FR G+++H+ V++ G ++H+ N ++ +YAK G+MS + K+F +
Sbjct: 189 KVLKAC---GKFR-DIETGRLIHSLVIRGGMCSSLHVNNSILAVYAKCGEMSCAEKIFRR 244
Query: 197 VRVKNYISWNMMFSGFALN---------FD--------------------------CDGA 221
+ +N +SWN++ +G+ FD CD A
Sbjct: 245 MDERNCVSWNVIITGYCQRGEIEQAQKYFDAMQEEGMEPGLVTWNILIASYSQLGHCDIA 304
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
++L ++ME G+ P+ TWTS++S + GR+ E DL M G+E + IA S
Sbjct: 305 MDLMRKMESFGITPDVYTWTSMISGFTQKGRINEAFDLLRDMLIVGVEPNSITIASAASA 364
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
CA + + MG IH +K D + + N+LI +Y K GD++ AQ++F + E+++ SW
Sbjct: 365 CASVKSLSMGSEIHSIAVKTSMVDDILIGNSLIDMYAKGGDLEAAQSIFDVMLERDVYSW 424
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDG------------GSME---------------- 373
N++I Y +AG C +A E+F ++++ D G M+
Sbjct: 425 NSIIGGYCQAGFCGKAHELFMKMQESDSPPNVVTWNVMITGFMQNGDEDEALNLFLRIEK 484
Query: 374 ----RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
+PNV SW+++I F N + ++AL +FR+MQ + + N VT+ +L C A
Sbjct: 485 DGKIKPNVASWNSLISGFLQNRQKDKALQIFRQMQFSNMAPNLVTVLTILPACTNLVAAK 544
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
+EIH R ++ + V N ++ Y K G + VF+ + KD+I+WNS++SGY
Sbjct: 545 KVKEIHCCATRRNLVSELSVSNTFIDSYAKSGNIMYSRKVFDGLSPKDIISWNSLLSGYV 604
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
++G E+AL F++M + G P V +++SA SHA +V+EG+ F + E++I +
Sbjct: 605 LHGCSESALDLFDQMRKDGLHPSRVTLTSIISAYSHAEMVDEGKHAFSNISEEYQIRLDL 664
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
EHY+ MV LLGR+G L +A + ++NMP+EPN+ VW LL +CR+HKN +A +
Sbjct: 665 EHYSAMVYLLGRSGKLAKALEFIQNMPVEPNSSVWAALLTACRIHKNFGMAIFAGEHMLE 724
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L E + LLS Y+ G+ +A K+ K K +K GQSWIE+ +H F G+
Sbjct: 725 LDPENIITQHLLSQAYSVCGKSWEAQKMTKLEKEKFVKMPVGQSWIEMNNMVHTFVVGD 783
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
+ +NG EA+ + + +T LL C + + +GRE+H + V
Sbjct: 56 LNQLCANGSLSEAVAILDSLAQQGSKVRPITFMNLLQACIDKDCILVGRELHTRIGLVR- 114
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
N V+ L++MY KCG L+E VF+++ +++L TW++MI + E + F +
Sbjct: 115 KVNPFVETKLVSMYAKCGHLDEARKVFDEMRERNLFTWSAMIGACSRDLKWEEVVELFYD 174
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
M++ G PD VL AC + GR I +++R
Sbjct: 175 MMQHGVLPDDFLLPKVLKACGKFRDIETGRLIHSLVIR 212
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 187/495 (37%), Positives = 295/495 (59%), Gaps = 10/495 (2%)
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
A ++FK +E + +P W S L + A + + LF +R+ + + VL
Sbjct: 79 AQQIFKCVEKQ--KPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLR 136
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
C +L G+++HG V K GF ++++N ++ +Y G++ A+ LF ++ ++++V+
Sbjct: 137 ACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVT 196
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
WN +I + G + A ++FS+ M NV SW+++I + G+ +EA+ LF
Sbjct: 197 WNIMIAQLIKQGDHEGAYDLFSR--------MPERNVRSWTSMIAGYVQCGKAKEAIHLF 248
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
KM+ A V N VT+ +L+ CA+ AL++G IH + R +N+ + N L++MY+KC
Sbjct: 249 AKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKC 308
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
GCLEE VFE++E++ +++W++MI G M+G E AL F +M + G +P+GV F+ +L
Sbjct: 309 GCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLL 368
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
ACSH GL++EGRR F M R++ I PQ+EHY CMVDLL RAGLL EA + + NMPM+PN
Sbjct: 369 HACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPN 428
Query: 581 AYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRIS 640
VWG LL +CR+HKN ++AE + L G Y++LSNIYA +GRWED A+VR
Sbjct: 429 GVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKF 488
Query: 641 AKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
K + +KK G S I V +H F +G D + + + EEL +M KG VP+ ++
Sbjct: 489 MKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVV 548
Query: 701 LWEMMGKKNVKRIQR 715
L ++ + VK + R
Sbjct: 549 LLDIEEGEKVKFVSR 563
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 238/505 (47%), Gaps = 51/505 (10%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
LL+ + +L+QVH Q+I T A S RV + A A+ +F+ K
Sbjct: 34 LLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQ-KPE 92
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
+ +WNS L+ +A+ L+ ++R+ V D FT V+RAC + S G+
Sbjct: 93 TFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNL----LDLSNGR 148
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
I+H V ++GF+ N+++ N ++ +YA G+M ++ LF+K+ ++ ++WN+M +
Sbjct: 149 ILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQG 208
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
D +GA +LF RM E N +WTS+++ + +CG+ +E + LF M + G++ +
Sbjct: 209 DHEGAYDLFSRMP----ERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVV 264
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
VL+ CADL A +G IH + + GF+ V + N LI +Y K G ++ A +F E+EE+
Sbjct: 265 AVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEER 324
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
+VSW+A+I A G +EA+ +FS + ++
Sbjct: 325 TVVSWSAMIGGLAMHGRAEEALRLFSDMSQVG---------------------------- 356
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR-VSMNKNILVQNGLLN 455
+ N VT GLL C+ ++ GR + R + I +++
Sbjct: 357 -----------IEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVD 405
Query: 456 MYMKCGCLEEGH-LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+ + G L E H + K + + W +++ ++ E A + ++E DG
Sbjct: 406 LLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGY 465
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMM 539
+V + + + AG + R+ M
Sbjct: 466 -YVVLSNIYAEAGRWEDTARVRKFM 489
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 208/645 (32%), Positives = 348/645 (53%), Gaps = 30/645 (4%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S Y G + AR VFE AP C ++++N+++ N +A+ L+ KM+ G
Sbjct: 86 MVSGYCASGDITLARGVFEKAPV-CMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV--LQMGFQGNVHIVNELIGMYAKMGQ 186
D FTF V+ + Q V H L+ G + N L+ +Y+K
Sbjct: 145 KPDNFTFASVLAGLALVAD-----DEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCAS 199
Query: 187 ----MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN--FVTW 240
+ + K+FD++ K+ SW M +G+ N D EL LEG++ N V +
Sbjct: 200 SPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEEL-----LEGMDDNMKLVAY 254
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
+++S + G +E +++ M GIE+ V+ CA +GK +H +V++
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR 314
Query: 301 GGFEDYVF-VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
ED+ F N+L+ +Y K G A+ +F ++ K++VSWNAL++ Y +G EA
Sbjct: 315 R--EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
+F + M+ N++SW +I A NG GEE L LF M+ SG +
Sbjct: 373 IFKE--------MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAI 424
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
CA A G++ H ++++ + ++ N L+ MY KCG +EE VF + D +
Sbjct: 425 KSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSV 484
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN++I+ G +G G A+ +EEM++ G +PD + + VL+ACSHAGLV++GR+ FD M
Sbjct: 485 SWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSM 544
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
+RI P +HYA ++DLL R+G +A +++++P +P A +W LL+ CR+H N ++
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMEL 604
Query: 600 AEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKR 659
A ++FGLI E G+YMLLSN++AA+G+WE+ A+VR + +G+KK SWIE++
Sbjct: 605 GIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMET 664
Query: 660 KIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
++H F ++ + + V L++L +M G VPD +L ++
Sbjct: 665 QVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDV 709
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 230/495 (46%), Gaps = 52/495 (10%)
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
R + VH +++ GFQ HI+N LI +Y K +++ + +LFD++ + I+ M
Sbjct: 27 RTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTM 86
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
SG+ + D A +F++ + + V + ++++ + ++LF M+ G
Sbjct: 87 VSGYCASGDITLARGVFEKAPV--CMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 269 EVGAEAIAVVLSVCADLAADHMGKV-IHGFVIKGGFEDYVFVKNALICVYGKHGD----V 323
+ A VL+ A +A D V H +K G V NAL+ VY K +
Sbjct: 145 KPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
A+ +F EI EK+ SW ++T Y + G D E+ LE +D + +++++A+
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEEL---LEGMD----DNMKLVAYNAM 257
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
I + + G +EAL++ R+M + + + T ++ CA + L +G+++H +V+R
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE- 316
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY--------------- 488
+ + N L+++Y KCG +E +FE++ KDL++WN+++SGY
Sbjct: 317 DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 489 ----------------GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
NG GE L F M GF+P AF + +C+ G G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
++ +++ + + ++ + + G+++EA + + MP ++ W L+ +
Sbjct: 437 QQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALG 494
Query: 593 MH----KNTDVAEAM 603
H + DV E M
Sbjct: 495 QHGHGAEAVDVYEEM 509
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 16/227 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+Q H QL+ G ++S ++++YA+ G + +AR VF T P C S+ WN+++
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP--CL-DSVSWNALIAAL 493
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG---SFRFRFSFGQIVHNHVLQ 164
+G A+ +Y +M K G+ D T V+ AC G R F + V+
Sbjct: 494 GQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP-- 551
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMMFSGFALNFDCDGALE 223
G H LI + + G+ SD+ + + + K W + SG ++ + + L
Sbjct: 552 ---PGADHYA-RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNME--LG 605
Query: 224 LFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
+ +L GL P LLS+ HA G+ EE + +MR RG++
Sbjct: 606 IIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVK 652
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 33/152 (21%)
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
L + +AN + L + +L + R +HG+++ + N L+++Y K L
Sbjct: 6 DLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSEL 65
Query: 464 EEGHLVFEQIEK---------------------------------KDLITWNSMISGYGM 490
+F++I + +D + +N+MI+G+
Sbjct: 66 NYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSH 125
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
N G +A+ F +M GFKPD F +VL+
Sbjct: 126 NNDGYSAINLFCKMKHEGFKPDNFTFASVLAG 157
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 219/670 (32%), Positives = 342/670 (51%), Gaps = 81/670 (12%)
Query: 35 DHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCK 94
+ L+Q + LK +H L+ G + +L +VL FG + + + +
Sbjct: 14 NRLIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTK---E 70
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
+ L+N+++R V N ++ ++++Y MRK G+ D FTFP V++AC +
Sbjct: 71 PNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARV----LDSEL 126
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G +H+ V++ G + + + LI +Y K G + ++FK+FD + KN+ SW SG+
Sbjct: 127 GVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVG 186
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
C A+++F+R+ GL P+ + +LS+ R G L
Sbjct: 187 VGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRS------------------- 227
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
G+ I ++ + G VFV AL+ YGK G+++ A+++F +
Sbjct: 228 ----------------GEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGML 271
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
EKNIVSW+++I YA GL E
Sbjct: 272 EKNIVSWSSMIQGYASNGLPKE-------------------------------------- 293
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
ALDLF KM + + + G+L CA AL +G + N ++ L+
Sbjct: 294 -ALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALI 352
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCG ++ VF + KKD + WN+ ISG M+G ++AL F +M ++G KPD
Sbjct: 353 DMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRN 412
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
FV +L AC+HAGLV EGRR F+ M F + P++EHY CMVDLLGRAG L EA ++K+
Sbjct: 413 TFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKS 472
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MPME NA VWG LL CR+H++T + E + ++ L +G+Y+LLSNIYAAS +WE+A
Sbjct: 473 MPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEA 532
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
AK+R +G+KK+ G SWIEV +H F G++ + + L ELA ++ G V
Sbjct: 533 AKIRSIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYV 592
Query: 695 PDNDIILWEM 704
P D +L+++
Sbjct: 593 PTTDHVLFDI 602
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 213/662 (32%), Positives = 340/662 (51%), Gaps = 92/662 (13%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
L +C + +KQ+H QLI + ++A ++++ Y+ L A NVF P +
Sbjct: 29 LHKCTNPNHIKQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVP---DPNV 85
Query: 98 LLWNSILRVNVSNGLYENALKLY---VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
L+N ++R +G N+L + +KM GVL D FT+P +++ C S+ S
Sbjct: 86 HLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSW---LSL 142
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
++VH HV ++GF ++ + N LI Y + G + + K+F + ++ +SWN M G
Sbjct: 143 VKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVK 202
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
N D DGAL++F M E + V+W ++L + G +++ LF+ M +R I
Sbjct: 203 NGDLDGALKVFDEMP----ERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDI------ 252
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ ++C Y K+GD+ +A+ LF
Sbjct: 253 ---------------------------------VSWSTMVCGYSKNGDMDMARMLFDRCP 279
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
KN+V W +I+ YAE G EA+ + ++EK G ++ IS
Sbjct: 280 VKNLVLWTTIISGYAEKGQVKEAMNLCDEMEK-SGLRLDDGFFIS--------------- 323
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
+L+ CAES L +G+++H +R + V N +
Sbjct: 324 -----------------------ILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFI 360
Query: 455 NMYMKCGCLEEGHLVFEQIE-KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
+MY KCGC+++ VF ++ +KDL++WNSMI G+G++G GE ++ F M+ GFKPD
Sbjct: 361 DMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDR 420
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
F+ +L AC+HAGLVNEGR F M R + I PQ+EHY CMVDLLGR G L+EA +V+
Sbjct: 421 YTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVR 480
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
+MP EPNA + GTLL +CRMH + +A +++ +F L+ G++ LLSNIYA SG W +
Sbjct: 481 SMPFEPNAIILGTLLGACRMHNDVKLATSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWIN 540
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
AKVR +G +K +G S IEV+ ++H F+ + ++ +++ L + G
Sbjct: 541 VAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFTVRDWSHPKSGDIYNMIDRLVHDLRQVGY 600
Query: 694 VP 695
VP
Sbjct: 601 VP 602
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 217/675 (32%), Positives = 351/675 (52%), Gaps = 51/675 (7%)
Query: 30 LLDCFDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
LL LL C K++ Q KQ+H Q+I G + + L +R+++ Y L DA+ V
Sbjct: 80 LLHPIGSLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVT 139
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
E++ L WN ++ V NG + AL +Y M + D +T+P V++AC
Sbjct: 140 ESSN---TLDPLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKAC---- 192
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
F+ G VH + + ++ + N L+ MY + G++ + LFD + ++ +SWN
Sbjct: 193 GESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWN 252
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
+ S +A A +LF M+ EG+E N + W ++ G + L MR
Sbjct: 253 TIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRT- 311
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
I + A A+ V L+ C+ + A +GK IHG ++ F+ + VKNALI +Y + D+ A
Sbjct: 312 SIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHA 371
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
LF EEK + I+W+A++
Sbjct: 372 FILFHRTEEKGL---------------------------------------ITWNAMLSG 392
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR-VSMNK 445
+A R EE LFR+M + N VTI+ +L +CA A L G+E H ++++ +
Sbjct: 393 YAHMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQFEE 452
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
+L+ N L++MY + G + E VF+ + K+D +T+ SMI GYGM G GE L FEEM
Sbjct: 453 YLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMC 512
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
+ KPD V VAVL+ACSH+GLV +G+ +F M+ I P++EHYACM DL GRAGLL
Sbjct: 513 KLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLL 572
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
+A + + MP +P + +W TLL +CR+H NT++ E A ++ + + +G Y+L++N+Y
Sbjct: 573 NKAKEFITGMPYKPTSAMWATLLGACRIHGNTEMGEWAAGKLLEMKPDHSGYYVLIANMY 632
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
AA+G W A+VR + G++K G +W++V + F G+S + +++ L
Sbjct: 633 AAAGSWRKLAEVRTYMRNLGVRKAPGCAWVDVGSEFSPFLVGDSSNPHASEIYPLMDGLN 692
Query: 686 LQMENKGCVPDNDII 700
M++ G V +++
Sbjct: 693 ELMKDAGYVRSEELV 707
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 368 bits (944), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 207/678 (30%), Positives = 369/678 (54%), Gaps = 60/678 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGR---LFDARNVFETAPFDC 93
LL+ CK+ Q Q+H Q IV G + F +R++S ++ G L +R +F + DC
Sbjct: 15 LLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLF--SQIDC 72
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG-DGFTFPLVIRACKFMGSFRFRF 152
+ +WN+++R + A+ LY+ M G+ + FTFP ++ +C + S
Sbjct: 73 PNL-FMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEP-- 129
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G VH+H+++ GF+ ++ + N LI +Y+ G ++ + LFD+ V++ +S+N
Sbjct: 130 --GHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYN------ 181
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
+++ +A + E + LF M+ GI
Sbjct: 182 -----------------------------TMIKGYAEVNQPESALCLFGEMQNSGILPDE 212
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKG--GFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+ SVC+ L ++GK IH V K + + +K+A++ +Y K G + +A+ +F
Sbjct: 213 FTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVF 272
Query: 331 SEI-EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
S + K+ +W++++ YA G + A ++F+ + + D VISW+A+I ++
Sbjct: 273 STMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERD--------VISWTAMISGYSQ 324
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI-HGHVVRVSMNKNIL 448
G+ EAL+LF++M+ + + VT+ +LS CA A ++G+ + H ++ N+N +
Sbjct: 325 AGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTI 384
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEK--KDLITWNSMISGYGMNGLGENALATFEEMIE 506
+ +++MY KCG ++ +F ++ K K +NSMI+G +GLGE A+ F E+I
Sbjct: 385 LTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELIS 444
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
G KPD V FV VL AC H+GL+ EG+++F+ M + I+PQMEHY CMVDLLGR G L+
Sbjct: 445 TGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLE 504
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
EA D+V+ MP E N+ +W LL++CR H N + E ++ + + Y+LLSNI A
Sbjct: 505 EAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILA 564
Query: 627 ASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELAL 686
+ +WE+A +VR + G++K G S+IE+ IH F + + K + +L+++A+
Sbjct: 565 DANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAM 624
Query: 687 QMENKGCVPDNDIILWEM 704
++++ G VP+ +++++
Sbjct: 625 RLKSAGYVPNTAQVMFDI 642
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 368 bits (944), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 211/665 (31%), Positives = 363/665 (54%), Gaps = 57/665 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSI--YARFGRLFDARNVFETAPFDCK 94
L QQC + QLKQ+H Q++ T + A+ + + ++ F L AR VF+ P +
Sbjct: 145 LFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIP---Q 201
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG-DGFTFPLVIRACKFMGSFRFRFS 153
+ WN ++R ++ ++ ++++M G + FTFP++I+A + R F
Sbjct: 202 PNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAV----AERRCFL 257
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ VH ++ F +V ++N LI YA G + ++ +F+ +
Sbjct: 258 VGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMI---------------- 301
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
EG + V+W S+++ + G ++ +DLF+ MR G+ A
Sbjct: 302 -----------------EGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAV 344
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ V+S CA +G+ + ++ + + V NA I ++ K G+V++A+ LF +
Sbjct: 345 TMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNM 404
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
E++++VSW +I YA+ A ++F SM R ++ +W+ +I + +GR
Sbjct: 405 EKRDVVSWTTIIDGYAKMSEHGIARDIFD--------SMPRKDIPAWNVLISGYEQSGRP 456
Query: 394 EEALDLFRKMQLAKVVA--NSVTISGLLSVCAESAALNIGREIHGHVV--RVSMNKNILV 449
+EAL +FR++QL K A + VT+ LS CA+ A++IG IHG++ R+ +N+N+
Sbjct: 457 KEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNL-- 514
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
L++MY K G +E+ VF I KD+ W++MI+G M+G GE A+ F +M E
Sbjct: 515 ATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQV 574
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
KP+ V F +L ACSH+GLV+EG+R+FD M R + + P+ +HY+CMVD+LGRAG L+EA
Sbjct: 575 KPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEAL 634
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASG 629
++ MP+ P+A VWG LL +C +H N ++AE S++ + G+Y+LLSN+YA +G
Sbjct: 635 KFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTG 694
Query: 630 RWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
WE +++R + GLKK G S IE+ +H F G++ +++ L+E+ ++
Sbjct: 695 DWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKLDEIMARLR 754
Query: 690 NKGCV 694
+ G V
Sbjct: 755 SHGYV 759
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 368 bits (944), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 222/696 (31%), Positives = 359/696 (51%), Gaps = 61/696 (8%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
+K+VH+ + G + ++ +YA+ G + DAR VF+ + W ++
Sbjct: 339 VKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMT---ERDIFSWTVMIGG 395
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
+G + A L+++M++ G L + T+ ++ A + + ++VH H + G
Sbjct: 396 LAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWV--KVVHKHAEEAG 453
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F ++ I N LI MYAK G + D+ +FD + ++ ISWN M G A N A +F
Sbjct: 454 FISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFL 513
Query: 227 RMELEGLEPNFVTWTSLLSSHA-----------------------------------RCG 251
+M+ EGL P+ T+ SLL++H RCG
Sbjct: 514 QMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCG 573
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
+++ LFD + R + I A G+ ++ E ++
Sbjct: 574 SIDDARLLFDKLSVRHVTTWNAMIG-------GAAQQRCGREALSLFLQMQREGFIPDAT 626
Query: 312 ALICVYGKHGD---VKVAQNLFSEIEEKNIVSW---NALITSYAEAGLCDEAVEVFSQLE 365
I + + D ++ + + S + +V NAL+ +Y++ G A +VF +
Sbjct: 627 TFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDM- 685
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
+ER NV +W+ +IG A +G G +A F +M +V ++ T +LS CA +
Sbjct: 686 ------VER-NVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACAST 738
Query: 426 AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMI 485
AL +E+H H V + ++ V N L++MY KCG +++ VF+ + ++D+ +W MI
Sbjct: 739 GALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMI 798
Query: 486 SGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRI 545
G +G G AL F +M GFKP+G ++VAVL+ACSHAGLV+EGRR F M +++ I
Sbjct: 799 GGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGI 858
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMAS 605
EP MEHY CMVDLLGRAGLL+EA + NMP+EP+ WG LL +C + N ++AE A
Sbjct: 859 EPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAK 918
Query: 606 QIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFS 665
+ L ++ +Y+LLSNIYAA+G+WE VR + KG++K G+SWIEV +IH F
Sbjct: 919 ERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVDNRIHSFV 978
Query: 666 SGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
G++ + K + L +L +++ KG VPD ++L
Sbjct: 979 VGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVL 1014
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 233/496 (46%), Gaps = 84/496 (16%)
Query: 31 LDCFDH--LLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNV 85
+D F + +LQ+C + I KQVH +I +G + ++A ++L +Y R GRL AR V
Sbjct: 116 IDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQV 175
Query: 86 FETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
F+ K + +W +++ G E+A+++Y KMR+ + T+ +++AC
Sbjct: 176 FDKL---LKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKAC--- 229
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
+G+ +H H++Q GFQ +V + L+ MY K G + D+ +FDK+ +N ISW
Sbjct: 230 -CCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISW 288
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
+M G A A LF +M+ EG PN T+ S+L+++A G LE
Sbjct: 289 TVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWV--------- 339
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
K +H + G + V NAL+ +Y K G +
Sbjct: 340 --------------------------KEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDD 373
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A+ +F + E++I SW +I A+ G EA +F Q+++ G + PN+ ++ +++
Sbjct: 374 ARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQR--NGCL--PNLTTYLSILN 429
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
A S A ++AL + +H H
Sbjct: 430 A---------------------------------SAIASTSALEWVKVVHKHAEEAGFIS 456
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
++ + N L++MY KCG +++ LVF+ + +D+I+WN+M+ G NG G A F +M
Sbjct: 457 DLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQ 516
Query: 506 EAGFKPDGVAFVAVLS 521
+ G PD ++++L+
Sbjct: 517 QEGLVPDSTTYLSLLN 532
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 122/525 (23%), Positives = 228/525 (43%), Gaps = 87/525 (16%)
Query: 127 GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ 186
G+ D F++ +++ C + VH +++ G + N+++ N+L+ +Y + G+
Sbjct: 113 GIAIDSFSYVNILQRCLKQEDILL----AKQVHVCIIKSGMEQNLYVANKLLRVYIRCGR 168
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
+ + ++FDK+ L+ N WT+++
Sbjct: 169 LQCARQVFDKL-----------------------------------LKKNIYIWTTMIGG 193
Query: 247 HARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY 306
+A G E+ M ++D MR+ + +L C GK IH +I+ GF+
Sbjct: 194 YAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSD 253
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
V V+ AL+ +Y K G ++ AQ +F ++ E+
Sbjct: 254 VRVETALVNMYVKCGSIEDAQLIFDKMVER------------------------------ 283
Query: 367 LDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
NVISW+ +IG A GRG+EA LF +MQ + NS T +L+ A +
Sbjct: 284 ---------NVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAG 334
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
AL +E+H H V + ++ V N L++MY K G +++ +VF+ + ++D+ +W MI
Sbjct: 335 ALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIG 394
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN-EGRRIFDMMVREFRI 545
G +G G+ A + F +M G P+ ++++L+A + A E ++ E
Sbjct: 395 GLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGF 454
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNM----PMEPNAYVWGTLLNSCRMHKNTDVAE 601
+ ++ + + G + +A + M + NA + G N C H+ V
Sbjct: 455 ISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCG-HEAFTVFL 513
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
M + GL+ ++T +Y+ L N + ++ E +V A GL
Sbjct: 514 QMQQE--GLVPDST-TYLSLLNTHGSTDALEWVNEVHKHAVETGL 555
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 157/335 (46%), Gaps = 51/335 (15%)
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
++GI + + + +L C + K +H +IK G E ++V N L+ VY + G ++
Sbjct: 111 QQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQ 170
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A+ +F ++ +KNI W +I YAE G ++A+ V+ ++ + G +PN I++ +++
Sbjct: 171 CARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECG----QPNEITYLSIL 226
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
A C L G++IH H+++
Sbjct: 227 KA-----------------------------------CCCPVNLKWGKKIHAHIIQSGFQ 251
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
++ V+ L+NMY+KCG +E+ L+F+++ ++++I+W MI G G G+ A F +M
Sbjct: 252 SDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQM 311
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR-----EFRIEPQMEHYACMVDLL 559
GF P+ +V++L+A + AG + + + V + R+ + H +
Sbjct: 312 QREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVH------MY 365
Query: 560 GRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
++G + +A + M E + + W ++ H
Sbjct: 366 AKSGSIDDARVVFDGMT-ERDIFSWTVMIGGLAQH 399
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 116/237 (48%), Gaps = 17/237 (7%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARV----LSIYARFGRLFDARNVFETAPFDCKSSS 97
+ + +K+VH+ A + + RV + Y++ G + A+ VF+ + +
Sbjct: 639 EALEWVKEVHSH-----ATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDM---VERNV 690
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
W ++ +G +A +++M + G++ D T+ ++ AC G+ + +
Sbjct: 691 TTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWV----KE 746
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
VHNH + G ++ + N L+ MYAK G + D+ +FD + ++ SW +M G A +
Sbjct: 747 VHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGR 806
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAE 273
AL+ F +M+ EG +PN ++ ++L++ + G ++E F M + GIE E
Sbjct: 807 GLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTME 863
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 166/360 (46%), Gaps = 55/360 (15%)
Query: 367 LDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
+DG + + NVI+ ++A+ + + + +S + +L C +
Sbjct: 86 VDGAAEQTHNVIT-------------AKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQE 132
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
+ + +++H +++ M +N+ V N LL +Y++CG L+ VF+++ KK++ W +MI
Sbjct: 133 DILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIG 192
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRI 545
GY G E+A+ +++M + +P+ + ++++L AC + G++I +++ F+
Sbjct: 193 GYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQS 252
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMAS 605
+ ++E +V++ + G +++A I M +E N W ++ + A +
Sbjct: 253 DVRVE--TALVNMYVKCGSIEDAQLIFDKM-VERNVISWTVMIGGLAHYGRGQEAFHLFL 309
Query: 606 QIF--GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK--- 660
Q+ G I + +Y+ + N A++G E +V A GL ++++
Sbjct: 310 QMQREGFIPNSY-TYVSILNANASAGALEWVKEVHSHAVNAGLA-------LDLRVGNAL 361
Query: 661 IHMFSSGNSLQSDLKNVCEVLEE------------------------LALQMENKGCVPD 696
+HM++ S+ D + V + + E L LQM+ GC+P+
Sbjct: 362 VHMYAKSGSI-DDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPN 420
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 368 bits (944), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 210/664 (31%), Positives = 358/664 (53%), Gaps = 58/664 (8%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
NS++D + +C I+ +QV ++ S F ++ Y++ + A + F
Sbjct: 31 QNSIID----MYIKCDAIYAAEQVFLRI----EKPSLFSWNCMIYGYSKLHEMGRAIDTF 82
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
P + S+ WN+I+ +GL+ +L +V+M G + T+ V+ AC +
Sbjct: 83 RQMP---ERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQPNSMTYASVLSACANI- 138
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
+ F +G+ +H ++++ +V + N L+ MYAK G + S ++F+ +R
Sbjct: 139 ---YDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVFNTLR-------- 187
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
E N VTWTSL+S A G EE D+F MRK
Sbjct: 188 ---------------------------EHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKD 220
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
+ + +A +L VC +G+ +HGF +K G V V NA + +Y K GD + A
Sbjct: 221 CVIMDNFILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKCGDFEKA 280
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
F + +++SW +ITS++ +G + A + F++ M NVISW+A++GA
Sbjct: 281 SLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNR--------MPERNVISWNAMLGA 332
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
+ N EE L L+ M +V + +T ++ C+E A +G +I V+V + +
Sbjct: 333 YCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVKVGLGSD 392
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+ V N + +Y +CG +EE +F+ I++K+LI+WNS++ GY NG G + F+ M+
Sbjct: 393 VSVVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNGEGMKVIEIFQNMLM 452
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
AG KPD + ++A+LS CSH+GLV E + F+ M ++F I +EH+ CMVDL GRAGLL+
Sbjct: 453 AGCKPDHITYIAILSGCSHSGLVKEAKYHFNSMTKDFGISVTLEHFVCMVDLFGRAGLLK 512
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
A D++ MP +PNA +WG LL++CR+H +T++AE + L TE SY+LL+N Y+
Sbjct: 513 LALDMIDQMPFKPNASIWGALLSACRIHHDTEMAELAMKNLLELNTENFESYILLANTYS 572
Query: 627 ASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELAL 686
+ GR E ++VR K K ++K G SWIEV ++H+F++ ++ +K++ + LE++
Sbjct: 573 SFGRLECVSEVRQVMKEKRVQKDPGCSWIEVCNRVHVFTANDTSHPQVKDIYKALEDIVK 632
Query: 687 QMEN 690
++++
Sbjct: 633 KIKD 636
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 210/480 (43%), Gaps = 82/480 (17%)
Query: 141 ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
AC +G R +H + GF N I N +I MY K + + ++F ++
Sbjct: 2 ACSSVGYIRI----AHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKP 57
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
+ SWN M G++ + A++ F++M E + V+W +++S+ + G +++ F
Sbjct: 58 SLFSWNCMIYGYSKLHEMGRAIDTFRQMP----ERDSVSWNTIISAFSHHGLHIQSLGTF 113
Query: 261 DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK-GGFEDYVFVKNALICVYGK 319
M +G + + A VLS CA++ GK +H +++ F D V V N L+ +Y K
Sbjct: 114 VEMWIQGCQPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLD-VLVGNGLVDMYAK 172
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
G + ++ +F+ + E N+V+W +LI+ A G +E ++F Q+ K
Sbjct: 173 CGLIDASKRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRK------------- 219
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVV 439
V+ ++ ++ +L VC ++IG ++HG V
Sbjct: 220 --------------------------DCVIMDNFILATILGVCEGETNISIGEQLHGFTV 253
Query: 440 RVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE---------------------------- 471
+ MN ++ V N L+MY KCG E+ L FE
Sbjct: 254 KTGMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARD 313
Query: 472 ---QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
++ ++++I+WN+M+ Y N E L + M+ +PD + FV ++ ACS +
Sbjct: 314 YFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAI 373
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
G +I V+ + + + L R G ++EA ++ ++ E N W +++
Sbjct: 374 SKLGTQILSQAVK-VGLGSDVSVVNSAITLYSRCGRIEEAQNLFDSI-QEKNLISWNSIM 431
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 164/359 (45%), Gaps = 15/359 (4%)
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
C+ + + +HG K GF + ++N++I +Y K + A+ +F IE+ ++ SW
Sbjct: 3 CSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFSW 62
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
N +I Y++ A++ F Q+ + D +SW+ +I AF+ +G ++L F
Sbjct: 63 NCMIYGYSKLHEMGRAIDTFRQMPERDS--------VSWNTIISAFSHHGLHIQSLGTFV 114
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+M + NS+T + +LS CA G+ +H +VRV ++LV NGL++MY KCG
Sbjct: 115 EMWIQGCQPNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCG 174
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
++ VF + + +++TW S+ISG G E F +M + D +L
Sbjct: 175 LIDASKRVFNTLREHNVVTWTSLISGIAHFGSQEEVYDIFYQMRKDCVIMDNFILATILG 234
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
C ++ G ++ V+ + + + + + G ++AS + M +
Sbjct: 235 VCEGETNISIGEQLHGFTVKT-GMNSSVPVGNATLSMYAKCGDFEKASLAFETMAAH-DV 292
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLITE-TTGSYMLLSNIYAASGRWEDAAKVRI 639
W T++ S N + A F + E S+ + Y + WE+ K+ I
Sbjct: 293 ISWTTMITSFSHSGNVE----RARDYFNRMPERNVISWNAMLGAYCQNSFWEEGLKLYI 347
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 368 bits (944), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 211/710 (29%), Positives = 366/710 (51%), Gaps = 88/710 (12%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + L KQVH ++V+G F+A ++ +YA+ D++ +F+ P
Sbjct: 160 FSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP 219
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + WN++ V A+ L+ +M G+ + F+ ++ AC +
Sbjct: 220 ---ERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDS-- 274
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
S G+I+H +++++G+ + N L+ MYAK+G ++D+ +F+K++ + +SWN + +
Sbjct: 275 --SRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIA 332
Query: 211 GFALNFDCDGALELFKRMELE------------------GL------------------- 233
G L+ + ALEL +M+ + GL
Sbjct: 333 GCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNL 392
Query: 234 --EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMG 291
E + + W +++S +++ E + LF M K GI ++ +L A L H+
Sbjct: 393 LPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVC 452
Query: 292 KVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEA 351
+ +HG +K GF H D+ V N+LI SY +
Sbjct: 453 RQVHGLSVKSGF----------------HSDIYVV---------------NSLIDSYGKC 481
Query: 352 GLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVAN 411
++A +F + D ++S++++I A+A G+GEEAL LF +MQ ++ +
Sbjct: 482 SHVEDAERIFEECTIGD--------LVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPD 533
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
S LL+ CA +A G+++H H+++ +I N L+NMY KCG +++ F
Sbjct: 534 RFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFS 593
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
++ ++ +++W++MI G +G G AL F +M++ G P+ + V+VL AC+HAGLV E
Sbjct: 594 ELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTE 653
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
+ F+ M F +P EHYACM+DLLGRAG + EA ++V MP E NA VWG LL +
Sbjct: 654 AKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAA 713
Query: 592 RMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
R+HK+ ++ A +F L E +G+++LL+NIYA++G+WE+ A+VR + +KK G
Sbjct: 714 RIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPG 773
Query: 652 QSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
SWIEVK K++ F G+ + + L+EL+ M+ G VP +I L
Sbjct: 774 MSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDL 823
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 161/586 (27%), Positives = 275/586 (46%), Gaps = 96/586 (16%)
Query: 3 HSLLHQPHQFSPS--NPSRPFSIITYNNSLLDCFDH------------LLQQCKTIHQLK 48
H LH P + +P FS ++L+ D LL QC T L+
Sbjct: 14 HQRLHLPFKPAPKLIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLR 73
Query: 49 ---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN-VFETAPFDCKSSSLLWNSIL 104
Q+H + +G + + ++++Y++ AR V E++ D S W++++
Sbjct: 74 PGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVS----WSALI 129
Query: 105 RVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
NGL AL + +M LGV + FTF V++AC + R G+ VH V+
Sbjct: 130 SGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRI----GKQVHGVVVV 185
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
GF+G+V + N L+ MYAK + DS +LFD++ +N +SWN +FS + C A+ L
Sbjct: 186 SGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGL 245
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
F M L G++PN + +S++++ C
Sbjct: 246 FYEMVLSGIKPNEFSLSSMVNA-----------------------------------CTG 270
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
L GK+IHG++IK G++ F NAL+ +Y K GD+ A ++F +I++ +IVSWNA+
Sbjct: 271 LRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAV 330
Query: 345 ITSYAEAGLCDEAVEVFSQLE--------KLDGGS------------------------- 371
I ++A+E+ Q++ K+D S
Sbjct: 331 IAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAF 390
Query: 372 --MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
+ ++I+W+A+I ++ EAL LF +M + N T+S +L A ++
Sbjct: 391 NLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVH 450
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
+ R++HG V+ + +I V N L++ Y KC +E+ +FE+ DL+++ SMI+ Y
Sbjct: 451 VCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYA 510
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
G GE AL F EM + KPD ++L+AC++ +G+++
Sbjct: 511 QYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQL 556
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 170/384 (44%), Gaps = 43/384 (11%)
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
F++ + L F L+ + + +T + +++ K + + + +LS C
Sbjct: 9 FQKPLHQRLHLPFKPAPKLIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCT 68
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
+ G IH + K G D ++N LI +Y K A+ L E E
Sbjct: 69 TKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSE--------- 119
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
P+++SWSA+I +A NG G AL F +M
Sbjct: 120 ------------------------------PDLVSWSALISGYAQNGLGGGALMAFHEMH 149
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
L V N T S +L C+ L IG+++HG VV ++ V N L+ MY KC
Sbjct: 150 LLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFL 209
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
+ +F++I ++++++WN++ S Y A+ F EM+ +G KP+ + ++++AC+
Sbjct: 210 DSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT 269
Query: 525 HAGLVNEGRRIFDMMVR-EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
+ G+ I +++ + +P + +VD+ + G L +A + + + +P+
Sbjct: 270 GLRDSSRGKIIHGYLIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVS 326
Query: 584 WGTLLNSCRMHKNTDVAEAMASQI 607
W ++ C +H++ + A + Q+
Sbjct: 327 WNAVIAGCVLHEHHEQALELLGQM 350
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 157/344 (45%), Gaps = 20/344 (5%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
I +N + L + +H +QVH + +G ++ ++ ++ Y + + DA
Sbjct: 429 IGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAE 488
Query: 84 NVFETAPFDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
+FE +C L+ + S++ G E ALKL+++M+ + + D F ++ AC
Sbjct: 489 RIFE----ECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNAC 544
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ +F G+ +H H+L+ GF ++ N L+ MYAK G + D+ + F ++ +
Sbjct: 545 ANLSAFEQ----GKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI 600
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
+SW+ M G A + AL+LF +M EG+ PN +T S+L + G + E F+
Sbjct: 601 VSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFES 660
Query: 263 MRKR-GIEVGAEAIAVVLSVCADLAADHMGKVIHG--FVIKGGFEDYVFVKNALICVYGK 319
M + G + E A ++ + GK+ V K FE V AL+
Sbjct: 661 MEELFGFKPMQEHYACMIDLLG-----RAGKINEAVELVNKMPFEANASVWGALLGAARI 715
Query: 320 HGDVKV---AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
H DV++ A + +E + + L YA AG + EV
Sbjct: 716 HKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEV 759
>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
Length = 712
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 222/695 (31%), Positives = 354/695 (50%), Gaps = 64/695 (9%)
Query: 21 FSIITYNNSLLDCFDHLLQQ-------CKTIHQL---KQVHNQLIVTGANASAFLAARVL 70
FS+I S D FD +LQ C L KQ+H +I +G +FL ++++
Sbjct: 62 FSLIQLRTSYNDSFDLILQSISILLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLV 121
Query: 71 SIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG 130
Y+ L +A + ET+ S WN ++ V + LYE A+ Y +M GV
Sbjct: 122 MFYSSLEFLPEAHTLVETSNLFRPCS---WNILITSYVKHKLYEAAILAYKQMVSKGVRP 178
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
D FTFP +++AC + +F G VH + ++ + N LI MY + G++ +
Sbjct: 179 DNFTFPSILKACGETQNLKF----GLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDTA 234
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
LFD + ++ +SWN M S ++ A ELF+ M+ + LE N VTW + R
Sbjct: 235 RNLFDNMLERDAVSWNSMISCYSSRGMWREAFELFESMQSKCLEINVVTWNIIAGGCLRV 294
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
G + + L MR GI + A+ + L C+ + A +GK IHGF I+ V+
Sbjct: 295 GNFTQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQ 354
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
NAL+ +Y + D++ A LF ++K+
Sbjct: 355 NALVTMYARCKDIRHAYMLFRLNDDKS--------------------------------- 381
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
I+W++++ GR EEAL LFR++ L V + VT + +L +CA A L
Sbjct: 382 ------RITWNSMLSGLTHLGRVEEALCLFRELLLFGVEPDYVTFASILPLCARVADLQH 435
Query: 431 GREIHGHVVR-VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
GRE H ++ + ++L+ N L++MY + G + E +F + KKD +T+ S+I+GYG
Sbjct: 436 GREFHCYITKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLIAGYG 495
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
M G G A+ FEEM KPD + +AVLSACSH+GLVN+ +F M + P++
Sbjct: 496 MQGEGGKAVRLFEEMKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAEMQSVHGLSPRL 555
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
EHYACM DL GR GLL +A +I+ MP P + +W TL+ +C +H N D+ E A ++
Sbjct: 556 EHYACMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCIHGNMDIGEWAAEKLLE 615
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
+ E +G Y+L++N+YAA+G W A++R + G+ K+ G SW++V + FS G++
Sbjct: 616 MRPEHSGYYVLIANMYAAAGSWSKLAEIRTLMRDSGVAKIPGCSWVDVGSEFISFSVGDT 675
Query: 670 -----LQSD--LKNVCEVLEELALQMENKGCVPDN 697
L+S L ++ +V++ +L M + DN
Sbjct: 676 SSPQALESKLLLDSLYDVMKHGSLIMTDSYDTGDN 710
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 219/678 (32%), Positives = 358/678 (52%), Gaps = 83/678 (12%)
Query: 1 MRHSLLHQ---------PHQFSPSNP--SRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQ 49
+ HSL H+ P F+ + P + P ++I N +LL +++ C T+ QLKQ
Sbjct: 121 VHHSLRHKSPYHLEHIKPFSFTTNKPKWNSPTNVIITNPTLL-----IMESCSTMRQLKQ 175
Query: 50 VHNQLIVTGANASAFLAARVLSI--YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+ ++ +TG AF +RV++ A G L A +F + ++ +WN+++R
Sbjct: 176 IQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVE---QPNTFMWNTMIRG- 231
Query: 108 VSNGLYENALK------LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF-GQIVHN 160
Y+NA K +V M +L V D +F ++AC+ +F F G+ V+
Sbjct: 232 -----YQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQ-----QFETVFEGESVYC 281
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
V +MGF + + N LI YA+ G + ++ ++FD
Sbjct: 282 VVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFD------------------------- 316
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
E + + VTWT+++ +A EE M++F++M +E + V+S
Sbjct: 317 ----------ESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVS 366
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
C+D+ MGK +H V + + + NAL+ +Y K + A+ LF + K++ S
Sbjct: 367 ACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYS 426
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
W +++ YA+ G + A F Q R N + WSA+I ++ N + +E+L LF
Sbjct: 427 WTSMVNGYAKCGDLESARRFFDQ--------TPRKNAVCWSAMIAGYSQNNKPKESLKLF 478
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH-VVRVSMNKNILVQNGLLNMYMK 459
+M VV T+ +LS C + LN+G IH + VV + ++ ++N +++MY K
Sbjct: 479 HEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAK 538
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
CG ++ VF + +++LI+WN+MI+GY NG + A+ F++M GF+P+ + FV++
Sbjct: 539 CGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSL 598
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
L+ACSH GL++EGR FD M R++ I+P+ HYACMVDLLGR GLL+EA ++ NMPM+P
Sbjct: 599 LTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQP 658
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRI 639
WG LLN+CRMH N ++A A + L E +G Y+LL+N A +W D +VR
Sbjct: 659 CEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRS 718
Query: 640 SAKTKGLKKVAGQSWIEV 657
K KG+KK+ G S IE+
Sbjct: 719 LMKDKGVKKIPGYSLIEI 736
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 214/660 (32%), Positives = 344/660 (52%), Gaps = 87/660 (13%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
L++QC T+ LK +H ++ + + L +++ YA G + A +F T+ S+
Sbjct: 10 LIKQCVTLEALKSLHASILKS--HLHPHLCTSLIAQYASLGSISHAYALFSTSH---SSN 64
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
LWN I+R + N+L+LY +M +LG+ FTFP +++AC + F G
Sbjct: 65 VFLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFEL----GA 120
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
H HV+ G++ +V + N L+ MY + G FD R
Sbjct: 121 RAHAHVVVFGYESDVFVANSLMAMYGRFG-------CFDFSR------------------ 155
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
++F+RM E N V+W+S++ ++A GR EE + LF M GI A
Sbjct: 156 ------QVFERMP----ERNVVSWSSMVGAYAHNGRYEEGLLLFWRMLNEGI---APNRG 202
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
+++ A + +H VI G + V+NA + +Y + G + VA+ F I +K
Sbjct: 203 SIVNAMACIHREHEADDFCRVVIDNGLDSDQSVQNAAMGMYARCGRIDVARRFFYGILDK 262
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
++V+ W+++I A+ A
Sbjct: 263 DLVA---------------------------------------WTSMIEAYVQADLPINA 283
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
L+LF++M+L +V +SVT+ L+ + A+ + R +HG + R +I + ++++
Sbjct: 284 LELFKQMKLLGIVPDSVTLLSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVIDL 343
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y+KCG LE F+++ ++LI+W++MISGYGM+G G AL F++M +A KPD +AF
Sbjct: 344 YVKCGNLEYARKCFDRMSARNLISWSTMISGYGMHGHGREALCLFDQM-KASIKPDHIAF 402
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
V VLSACSH GL+ EG F M R+F + P+ EHYACMVDLLGRAG L EA ++ MP
Sbjct: 403 VMVLSACSHGGLIAEGWECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMP 462
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAK 636
+ P+A VWG LL +CR+H N + AE A +F L E G Y+LLSNIYA+SG+ ++A
Sbjct: 463 ITPDAGVWGALLGACRIHSNLETAETAARHLFNLDAENPGRYILLSNIYASSGKRKEADD 522
Query: 637 VRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
+R K++G++K G + IE+K K++ F +G++ + L +L +++ G VPD
Sbjct: 523 IRALMKSRGVRKTVGHTIIEIKNKVYTFVAGDTSNPQTDLIYSELRKLMDRIQEAGYVPD 582
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 224/701 (31%), Positives = 350/701 (49%), Gaps = 106/701 (15%)
Query: 58 GANASAFLAARVLSIYARFGRLFDARNVFETAP-FDCKSSSLLWNSILRVNVSNGLYENA 116
G N F+ + ++ +YA G + DAR +F+ P DC +LWN +L V G +A
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDC----VLWNVMLNGFVKCGEPNSA 57
Query: 117 LKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNE 176
+K++ MR + TF V+ C + FG +H V+ GF + + N
Sbjct: 58 VKVFEDMRNCQTKPNSITFASVLSIC----ASEALSEFGNQLHGLVISCGFHFDPLVANA 113
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN 236
L+ MY+K GQ+SD+ KLF+ + N ++WN M +GF N D A LF M G+ P+
Sbjct: 114 LVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPD 173
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
+T+ S L S L++ GK IHG
Sbjct: 174 SITFASFLPSVTESASLKQ-----------------------------------GKEIHG 198
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
++++ G VF+K+ALI +Y K DV +A +F + +IV A+I+ Y GL ++
Sbjct: 199 YILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNND 258
Query: 357 AVEVFSQL--EKLDGGSMERPNVIS-----------------------------WSAVIG 385
A+E+F L EK+ ++ +V+ SA++
Sbjct: 259 ALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMD 318
Query: 386 AFASNGRGEEALDLFRKMQLAKVVA-------------------------------NSVT 414
+A GR + A +FR+M V + V+
Sbjct: 319 MYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVS 378
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
IS LS CA AL+ G+ IH +++ + + + ++ L++MY KCG L VF+ +
Sbjct: 379 ISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMR 438
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
+K+ ++WNS+I+ YG +G E +LA F +M+E G +PD V F+ +LSAC HAG V++G +
Sbjct: 439 EKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQ 498
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F M E+ I +MEHYAC+VDL GRAG L EA + +KNMP P+ VWGTLL +CR+H
Sbjct: 499 YFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVH 558
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
N ++AE + + L E +G Y+LLSN++A +G+W K+R K +G++KV G SW
Sbjct: 559 GNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSW 618
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
IEV + HMF + + + + VL L L++ +G P
Sbjct: 619 IEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKEGYCP 659
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 198/427 (46%), Gaps = 76/427 (17%)
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
MGF + + + LI +YA+ G + D+ +LFDK+ K+ + WN+M +GF + + A+++
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
F+ M +PN +T+ S VLS+CA
Sbjct: 61 FEDMRNCQTKPNSITFAS-----------------------------------VLSICAS 85
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
A G +HG VI GF V NAL+ +Y K G + A LF+ + + N+V+WN +
Sbjct: 86 EALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGM 145
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
I + + G DEA +FS+ M
Sbjct: 146 IAGFVQNGFMDEASLLFSE---------------------------------------MI 166
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
A V +S+T + L ESA+L G+EIHG+++R + ++ +++ L+++Y KC +
Sbjct: 167 SAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVG 226
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
+F+Q D++ ++ISGY +NGL +AL F ++E P+ V +VL AC+
Sbjct: 227 MACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACA 286
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
+N G+ + +++ E + A M D+ + G L A I + MP E +A W
Sbjct: 287 GLATLNLGKELHANILKHGLDERRHVGSAIM-DMYAKCGRLDLAYQIFRRMP-EKDAVCW 344
Query: 585 GTLLNSC 591
++ +C
Sbjct: 345 NAIITNC 351
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 200/421 (47%), Gaps = 77/421 (18%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
Q+H +I G + +A ++++Y++FG+L DA +F T P ++ + WN ++ V
Sbjct: 94 QLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMP---DTNVVTWNGMIAGFV 150
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
NG + A L+ +M GV D TF + + S + G+ +H ++L+ G
Sbjct: 151 QNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLK----QGKEIHGYILRHGIA 206
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+V + + LI +Y K + + K+F + + + + SG+ LN + ALE+F+ +
Sbjct: 207 LDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWL 266
Query: 229 ELEGLEPNFVTWTSLLSS-----------------------------------HARCGRL 253
E + PN VT S+L + +A+CGRL
Sbjct: 267 LEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRL 326
Query: 254 -------------------------------EETMDLFDMMRKRGIEVGAEAIAVVLSVC 282
+E +DLF M + G+ +I+ LS C
Sbjct: 327 DLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSAC 386
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
A+L A H GK IH F+IKG F+ VF ++ALI +YGK G++ VA+ +F + EKN VSWN
Sbjct: 387 ANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWN 446
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
++I +Y G + ++ +F ++ L+ G +P+ +++ ++ A G+ ++ + FR
Sbjct: 447 SIIAAYGSHGHLEVSLALFHKM--LEDGI--QPDHVTFLTILSACGHAGQVDKGIQYFRC 502
Query: 403 M 403
M
Sbjct: 503 M 503
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 125/240 (52%), Gaps = 8/240 (3%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
T++ K++H ++ G + + + ++ +YA+ GRL A +F P + ++ WN+
Sbjct: 290 TLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMP---EKDAVCWNA 346
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
I+ NG + A+ L+ +M + G+ D + + AC + + G+ +H+ +
Sbjct: 347 IITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALH----HGKAIHSFM 402
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
++ F V + LI MY K G +S + +FD +R KN +SWN + + + + + +L
Sbjct: 403 IKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSL 462
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSV 281
LF +M +G++P+ VT+ ++LS+ G++++ + F M + GI E A ++ +
Sbjct: 463 ALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDL 522
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 219/737 (29%), Positives = 366/737 (49%), Gaps = 80/737 (10%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C + LK ++H ++ G F+++ ++ YA+ + +A+ VF+ P
Sbjct: 147 ILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMP--- 203
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ WNS+ V+ G + L ++ +M GV D T ++ AC + +
Sbjct: 204 HRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKS--- 260
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H L+ G NV + N L+ +Y + ++ +FD + +N I+WN + S +
Sbjct: 261 -GKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYV 319
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSS--------------------------- 246
L +F+ M L G++P+ + +S+L +
Sbjct: 320 NCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVF 379
Query: 247 --------HARCGRLEETMDLFDMMRKR-------------------------------G 267
+A C + E +FD+M R G
Sbjct: 380 VCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNG 439
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
++ + +L C+DL GKVIHGF ++ G + VFV NAL+ +Y K V+ AQ
Sbjct: 440 VKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQ 499
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+F I + + SWN ++T+Y ++ + +FSQ+ + + + E I+WS VIG
Sbjct: 500 VVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADE----ITWSVVIGGC 555
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
N R EEA+++FRKMQ + TI +L C+ S L +G+EIH +V R + ++
Sbjct: 556 VKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDL 615
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
N L++MY KCG L VF+ + KD+ +WN+MI GM+G G+ AL+ FE+M+ +
Sbjct: 616 ARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLS 675
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
KPD F VLSACSH+ LV EG +IF+ M R+ +EP+ EHY C+VD+ RAG L+E
Sbjct: 676 MVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEE 735
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A ++ MPMEP A W L CR++KN ++A+ A ++F + + +Y+ L NI
Sbjct: 736 AYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVT 795
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
+ W +A+K+R K +G+ K G SW V ++H F +G+ + + L+EL +
Sbjct: 796 AKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAK 855
Query: 688 MENKGCVPDNDIILWEM 704
++ G PD D +L ++
Sbjct: 856 IKAAGYKPDTDYVLHDI 872
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 212/486 (43%), Gaps = 85/486 (17%)
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+ +GL A+K+Y R G+ D F V +AC + R Q H+ + G
Sbjct: 16 IPHGLPNEAIKIYTSSRARGIKPDKPVFMAVAKAC---AASRDALKVKQF-HDDATRCGV 71
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+V I N I Y K + + ++FD + ++
Sbjct: 72 MSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARD-------------------------- 105
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
VTW SL + + CG ++ +++F M ++ ++ +L C+DL
Sbjct: 106 ---------VVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQD 156
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
GK IHGFV++ G + VFV +A + Y K V+ AQ +F + ++
Sbjct: 157 LKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRD---------- 206
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
V++W+++ + + G ++ L++FR+M L
Sbjct: 207 -----------------------------VVTWNSLSSCYVNCGFPQKGLNVFREMVLDG 237
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
V + VT+S +LS C++ L G+ IHG ++ M +N+ V N L+N+Y C C+ E
Sbjct: 238 VKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQ 297
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
VF+ + +++ITWNS+ S Y G + L F EM G KPD +A ++L ACS
Sbjct: 298 AVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLK 357
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYAC--MVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
+ G+ I V+ +E + + C +V+L ++EA + MP N W
Sbjct: 358 DLKSGKTIHGFAVKHGMVE---DVFVCTALVNLYANCLCVREAQTVFDLMPHR-NVVTWN 413
Query: 586 TLLNSC 591
+ L+SC
Sbjct: 414 S-LSSC 418
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 138/567 (24%), Positives = 242/567 (42%), Gaps = 93/567 (16%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
++KQ H+ G + + + Y + + AR VF+ + WNS+
Sbjct: 58 KVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDL---VARDVVTWNSLSA 114
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
V+ G + L ++ KM V + T ++ C + + G+ +H V++
Sbjct: 115 CYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKS----GKEIHGFVVRH 170
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
G +V + + + YAK + ++ +FD
Sbjct: 171 GMVEDVFVSSAFVNFYAKCLCVREAQTVFD------------------------------ 200
Query: 226 KRMELEGLEP--NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
L P + VTW SL S + CG ++ +++F M G++ ++ +LS C+
Sbjct: 201 -------LMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACS 253
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
DL GK IHGF +K G + VFV NAL+ +Y
Sbjct: 254 DLQDLKSGKAIHGFALKHGMVENVFVSNALVNLY-------------------------- 287
Query: 344 LITSYAEAGLC-DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
E+ LC EA VF M NVI+W+++ + + G ++ L++FR+
Sbjct: 288 ------ESCLCVREAQAVFDL--------MPHRNVITWNSLASCYVNCGFPQKGLNVFRE 333
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
M L V + + +S +L C++ L G+ IHG V+ M +++ V L+N+Y C C
Sbjct: 334 MGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLC 393
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
+ E VF+ + ++++TWNS+ S Y G + L F EM+ G KPD V +++L A
Sbjct: 394 VREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHA 453
Query: 523 CSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC--MVDLLGRAGLLQEASDIVKNMPMEPN 580
CS + G+ I VR +E + + C ++ L + ++EA + +P
Sbjct: 454 CSDLQDLKSGKVIHGFAVRHGMVE---DVFVCNALLSLYAKCVCVREAQVVFDLIPHREV 510
Query: 581 AYVWGTLLNSCRMHKNTDVAEAMASQI 607
A W +L + +K + M SQ+
Sbjct: 511 AS-WNGILTAYFTNKEYEKGLYMFSQM 536
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 225/710 (31%), Positives = 365/710 (51%), Gaps = 87/710 (12%)
Query: 29 SLLDC--FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
S LD F LL C K++ + + VH ++I T ++ F+ R++ +Y + G L DAR
Sbjct: 15 SFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDAR 74
Query: 84 NVFETAP--------------------------FDC--KSSSLLWNSILRVNVSNGLYEN 115
VF+ F C + WN+++ +E
Sbjct: 75 KVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEE 134
Query: 116 ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVN 175
AL+ V M + + ++F + AC + S G +H + + + +V++ +
Sbjct: 135 ALRFVVDMHSEDFVLNEYSFGSALSACAGL----MDLSIGVQIHGLIAKSRYSLDVYMGS 190
Query: 176 ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
L+ MY+K ++ + + FD + V+N
Sbjct: 191 ALVDMYSKCRVVASAQRAFDDMDVRN---------------------------------- 216
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
V+W SL++ + + G + +++F M GIE +A V S CA L+A G IH
Sbjct: 217 -IVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIH 275
Query: 296 GFVIK-GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
V+K + + + + NAL+ +Y K V A+ +F + +++VS ++++ YA+A
Sbjct: 276 ARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSV 335
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
A +FS + MER NV+SW+A+I + NG EEA+ LF ++ + T
Sbjct: 336 KAARLMFSNM-------MER-NVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYT 387
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSM------NKNILVQNGLLNMYMKCGCLEEGHL 468
LL+ CA A L +GR+ H H+++ + +I V N L++MYMKCG +E+G L
Sbjct: 388 FGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRL 447
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
VFE++ ++D ++WN+MI GY NG G AL F EM+ +G +PD V + VLSACSHAGL
Sbjct: 448 VFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGL 507
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
V EGR F M E + P +HY CMVDLLGRAG L EA+++++ MPMEP+A VWG+LL
Sbjct: 508 VEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLL 567
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
+C++H N + + +A ++ + +G Y+LLSN+YA GRW+D +VR + G+ K
Sbjct: 568 AACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIK 627
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
G SWI ++ +H+F + K++ +L+ L QM+ G VP+ D
Sbjct: 628 QPGCSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPEAD 677
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 174/382 (45%), Gaps = 63/382 (16%)
Query: 28 NSLLDCFDHLLQQCKTIHQLKQVHNQL----------IVTG-ANASAFLAARVLSIYARF 76
N+L+D + +C+ +++ + V +++ +V+G A AS+ AAR++ F
Sbjct: 292 NALVDMY----AKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLM-----F 342
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
+ + RNV WN+++ NG E A++L++ +++ + +TF
Sbjct: 343 SNMME-RNVVS------------WNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFG 389
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGF------QGNVHIVNELIGMYAKMGQMSDS 190
++ AC + + G+ H H+L+ GF ++ + N LI MY K G + D
Sbjct: 390 NLLNACANLADLKL----GRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDG 445
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
+F+++ ++ +SWN M G+A N ALE+F+ M + G P+ VT +LS+ +
Sbjct: 446 RLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHA 505
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA-----DHMGKVIHGFVIKGGFED 305
G +EE F M IE G + + DL D +I + E
Sbjct: 506 GLVEEGRCYFQSMT---IEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPM----EP 558
Query: 306 YVFVKNALICVYGKHGDVK----VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
V +L+ HG++ VA+ L EI+ N + L YAE G + V V
Sbjct: 559 DAVVWGSLLAACKVHGNITLGKYVAERLL-EIDPLNSGPYVLLSNMYAELGRWKDVVRVR 617
Query: 362 SQLEKLDGGSMERPNVISWSAV 383
Q+ ++ G +++P SW ++
Sbjct: 618 KQMRQM--GVIKQPGC-SWISI 636
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 184/486 (37%), Positives = 289/486 (59%), Gaps = 8/486 (1%)
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
+E +P W S L + A + + LF +R+ + + VL C +L
Sbjct: 86 VEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLS 145
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
G+++HG V K GF ++++N ++ +Y G++ A+ LF ++ ++++V+WN +I
Sbjct: 146 NGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLI 205
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+ G + A ++FS+ M NV SW+++I + G+ +EA+ LF KM+ A V
Sbjct: 206 KQGDHEGAYDLFSR--------MPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVK 257
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
N VT+ +L+ CA+ AL++G IH + R +N+ + N L++MY+KCGCLEE V
Sbjct: 258 CNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKV 317
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
FE++E++ +++W++MI G M+G E AL F +M + G +P+GV F+ +L ACSH GL+
Sbjct: 318 FEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLI 377
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+EGRR F M R++ I PQ+EHY CMVDLL RAGLL EA + + NMPM+PN VWG LL
Sbjct: 378 SEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLG 437
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
+CR+HKN ++AE + L G Y++LSNIYA +GRWED A+VR K + +KK
Sbjct: 438 ACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKT 497
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKN 709
G S I V +H F +G D + + + EEL +M KG VP+ ++L ++ +
Sbjct: 498 PGWSSITVDGVVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEK 557
Query: 710 VKRIQR 715
VK + R
Sbjct: 558 VKFVSR 563
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/505 (26%), Positives = 238/505 (47%), Gaps = 51/505 (10%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
LL+ + +L+QVH Q+I T A S RV + A A+ +FE K
Sbjct: 34 LLRNFNSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFECVEKQ-KPE 92
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
+ +WNS L+ +A+ L+ ++R+ V D FT V+RAC + S G+
Sbjct: 93 TFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNL----LDLSNGR 148
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
I+H V ++GF+ N+++ N ++ +YA G+M ++ LF+K+ ++ ++WN+M +
Sbjct: 149 ILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQG 208
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
D +GA +LF RM E N +WTS+++ + +CG+ +E + LF M + G++ +
Sbjct: 209 DHEGAYDLFSRMP----ERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVV 264
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
VL+ CADL A +G IH + + GF+ V + N LI +Y K G ++ A +F E+EE+
Sbjct: 265 AVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEER 324
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
+VSW+A+I A G +EA+ +FS + ++
Sbjct: 325 TVVSWSAMIGGLAMHGRAEEALRLFSDMSQVG---------------------------- 356
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR-VSMNKNILVQNGLLN 455
+ N VT GLL C+ ++ GR + R + I +++
Sbjct: 357 -----------IEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVD 405
Query: 456 MYMKCGCLEEGH-LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+ + G L E H + K + + W +++ ++ E A + ++E DG
Sbjct: 406 LLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGY 465
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMM 539
+V + + + AG + R+ M
Sbjct: 466 -YVVLSNIYAEAGRWEDTARVRKFM 489
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 207/655 (31%), Positives = 347/655 (52%), Gaps = 100/655 (15%)
Query: 76 FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
F + D NVF WNS++ +G AL+ + MRKL + + TF
Sbjct: 108 FNKYVDKTNVFS------------WNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTF 155
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
P I++C + G+ H L GF+ ++ + + L+ MY+K G++ D+ LFD
Sbjct: 156 PCAIKSCSAL----LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFD 211
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ +N V+WTS+++ + +
Sbjct: 212 EISHRN-----------------------------------IVSWTSMITGYVQNDDAHR 236
Query: 256 TMDLFD--MMRKRGIEVGAE------AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
+ LF ++ + G E E A+ VLS C+ ++ + + +HGF+IK GFE +
Sbjct: 237 ALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDL 296
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
V+N L+ Y K G++ V++ +F + E+
Sbjct: 297 GVENTLMDAYAKCGELGVSRRVFDGMAER------------------------------- 325
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM-QLAKVVANSVTISGLLSVCAESA 426
+VISW+++I +A NG E++++F +M + ++ N+VT+S +L CA S
Sbjct: 326 --------DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSG 377
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
+ +G+ IH V+++ + N+ V +++MY KCG +E F+++ +K++ +W++M++
Sbjct: 378 SQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVA 437
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
GYGM+G + AL F EM AG KP+ + FV+VL+ACSHAGL+ EG F M EF +E
Sbjct: 438 GYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVE 497
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
P +EHY CMVDLLGRAG L+EA D++K M + P+ VWG LL +CRMHKN D+ E A +
Sbjct: 498 PGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARK 557
Query: 607 IFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSS 666
+F L + G Y+LLSNIYA +GRWED ++RI K GL K G S +++K ++H+F
Sbjct: 558 LFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLV 617
Query: 667 GNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNI 721
G+ + + E LE+L+++++ G VPD +L + +G + + + R+ ++ +
Sbjct: 618 GDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHD-VGHEEKEMVLRVHSEKL 671
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 180/386 (46%), Gaps = 55/386 (14%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
N S C +H +Q H Q ++ G F+++ ++ +Y++ G L DAR +F
Sbjct: 151 NRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLF 210
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVK--MRKLGVLGDG------FTFPLV 138
+ + + W S++ V N AL L+ + + + G GDG V
Sbjct: 211 DEIS---HRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSV 267
Query: 139 IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR 198
+ AC + S + VH +++ GF+G++ + N L+ YAK G++ S ++FD +
Sbjct: 268 LSACSRVS----EKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMA 323
Query: 199 VKNYISWNMMFSGFALNFDCDGALELFKRMELEG-LEPNFVTWTSLLSSHARCGRLEETM 257
++ ISWN + + +A N ++E+F RM +G + N VT +++L + A G
Sbjct: 324 ERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSG------ 377
Query: 258 DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
+ +GK IH VIK G E VFV ++I +Y
Sbjct: 378 -----------------------------SQRLGKCIHDQVIKMGLESNVFVGTSIIDMY 408
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
K G V++A+ F + EKN+ SW+A++ Y G EA+EVF ++ + +PN
Sbjct: 409 CKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNM----AGVKPNY 464
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKM 403
I++ +V+ A + G EE F+ M
Sbjct: 465 ITFVSVLAACSHAGLLEEGWHWFKAM 490
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 156/312 (50%), Gaps = 23/312 (7%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH LI G + ++ YA+ G L +R VF+ + + WNSI+ V
Sbjct: 283 VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMA---ERDVISWNSIIAVYAQ 339
Query: 110 NGLYENALKLYVKMRKLGVLG-DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
NG+ +++++ +M K G + + T V+ AC GS R G+ +H+ V++MG +
Sbjct: 340 NGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRL----GKCIHDQVIKMGLE 395
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
NV + +I MY K G++ + K FD++R KN SW+ M +G+ ++ ALE+F M
Sbjct: 396 SNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEM 455
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCADLAA 287
+ G++PN++T+ S+L++ + G LEE F M +E G E ++ +
Sbjct: 456 NMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLG---- 511
Query: 288 DHMGKVIHGFVIKGGFE---DYVFVKNALICVYGKHGDVKV----AQNLFSEIEEKNIVS 340
G + F + G + D+V V AL+ H +V + A+ LF E++ KN
Sbjct: 512 -RAGYLKEAFDLIKGMKLRPDFV-VWGALLGACRMHKNVDLGEISARKLF-ELDPKNCGY 568
Query: 341 WNALITSYAEAG 352
+ L YA+AG
Sbjct: 569 YVLLSNIYADAG 580
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 203/623 (32%), Positives = 337/623 (54%), Gaps = 35/623 (5%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
YA+ + +AR +F+ P + WNS+L NG L+ + +M + V+
Sbjct: 150 YAKNRQFDEARRLFDAMP---AKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVV--- 203
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
++ L++ +G + F + + N V V L G +A+ G+++++ +
Sbjct: 204 -SWNLMVDGFVEVGDLNSSWEFFEKIPN-------PNTVSWVTMLCG-FARFGKIAEARR 254
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
LFD++ ++N ++WN M + + N D A+ LF M E N ++WT++++ + R G+
Sbjct: 255 LFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMP----EKNSISWTTVINGYVRMGK 310
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
L+E L + M R + A A++ + D ++ + I+ V N
Sbjct: 311 LDEARQLLNQMPYRNV---AAQTAMISGYVQNKRMDDARQIFNQISIRD-----VVCWNT 362
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
+I Y + G + A +LF ++ +K+IVSWN ++ SYA+ G D A+++F + M
Sbjct: 363 MIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEE--------M 414
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
+ N++SW+++I NG +AL F M + T + LS CA AAL +G+
Sbjct: 415 KEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGK 474
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
++H V++ ++ V N L+ MY KCG + L+F+ I+ D+++WNS+I+ Y +NG
Sbjct: 475 QLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNG 534
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
G AL F +M G PD V FV +LSACSH GL+++G ++F MV+ + IEP EHY
Sbjct: 535 NGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHY 594
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
ACMVDLLGRAG L+EA +V+ M + NA +WG LL +CR+H N ++A+ A ++
Sbjct: 595 ACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEP 654
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
T +Y+LLSN+ A +GRW++ A+VR K KG +K G SWIE++ ++H F S +
Sbjct: 655 HKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWSWIELQNRVHAFLSEDPAHP 714
Query: 673 DLKNVCEVLEELALQMENKGCVP 695
+C +L L M N P
Sbjct: 715 RAVELCHILRSLTAHMRNTAKCP 737
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 204/426 (47%), Gaps = 55/426 (12%)
Query: 146 GSFRFRFSF--------GQIVHN-HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
GS+ FR + GQI V Q N N +I +AK G++SD+ +LFD
Sbjct: 12 GSYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDG 71
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
+ +N +SWN M + + N + A +LF +M L +WT +++ + R G L +
Sbjct: 72 MPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDL----YSWTLMITCYTRNGELAKA 127
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
+LF+++ + V A+ V + D ++ K + N+++
Sbjct: 128 RNLFNLLPYKWNPVCCNAM--VAGYAKNRQFDEARRLFDAMPAKD-----LVSWNSMLTG 180
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
Y ++G++++ F E+ E+++VSWN ++ + E G + + E F ++ PN
Sbjct: 181 YTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPN--------PN 232
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE--- 433
+SW ++ FA G+ EA LF +M + VVA + I+ + C A+++ E
Sbjct: 233 TVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPE 292
Query: 434 ---------IHGHV-------VRVSMN----KNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
I+G+V R +N +N+ Q +++ Y++ +++ +F QI
Sbjct: 293 KNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQI 352
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
+D++ WN+MI+GY G + AL F++M+ K D V++ ++++ + G ++
Sbjct: 353 SIRDVVCWNTMIAGYSQCGRMDEALHLFKQMV----KKDIVSWNTMVASYAQVGQMDAAI 408
Query: 534 RIFDMM 539
+IF+ M
Sbjct: 409 KIFEEM 414
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 149/335 (44%), Gaps = 50/335 (14%)
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G YVF N I GK G + A +F + KN V+ N++I+++A+ G +A ++
Sbjct: 9 GEHGSYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQL 68
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
F DG M + N++SW+++I A+ N R EEA LF KM + + ++ I+
Sbjct: 69 F------DG--MPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTR 120
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
+ A N+ + N + N ++ Y K +E +F+ + KDL++
Sbjct: 121 NGELAKARNLFNLL-------PYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVS 173
Query: 481 WNSMISGYGMNGLGENALATFEEMIEA----------GF-----------------KPDG 513
WNSM++GY NG L FEEM E GF P+
Sbjct: 174 WNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNT 233
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMM-VREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
V++V +L + G + E RR+FD M +R + + M+ + + EA +
Sbjct: 234 VSWVTMLCGFARFGKIAEARRLFDQMPIR------NVVAWNAMIAAYVQNCHVDEAISLF 287
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
MP E N+ W T++N D A + +Q+
Sbjct: 288 MEMP-EKNSISWTTVINGYVRMGKLDEARQLLNQM 321
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 108/232 (46%), Gaps = 26/232 (11%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP-FDCKSSSLLWNSILRV 106
KQ+H ++ +G F++ ++++YA+ G + A +F+ FD S WNS++
Sbjct: 474 KQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVS----WNSLIAA 529
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS-FGQIVHNHVLQM 165
NG ALKL+ KM GV D TF ++ AC +G F +V +
Sbjct: 530 YALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAY---- 585
Query: 166 GFQGNVHIVNE----LIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDG 220
N+ + E ++ + + G++ ++F+L +++ N W + ++ G
Sbjct: 586 ----NIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIH----G 637
Query: 221 ALEL--FKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
LEL F +L EP+ + LLS+ A GR +E + +M+++G E
Sbjct: 638 NLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAE 689
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 213/671 (31%), Positives = 355/671 (52%), Gaps = 64/671 (9%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVL--SIYARFGRLFDARNVFETAPFDCK 94
LL+ C T++++ Q+H+Q I TG +++ +V+ G ++ AR VF+ P +
Sbjct: 41 LLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIP---Q 97
Query: 95 SSSLLWNSIL----RVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
S +WN+++ R+N S E+ + LY M + DGFTFP +++ F
Sbjct: 98 PSVFIWNTMIKGYSRINCS----ESGVSLYKLMLVHNIKPDGFTFPFLLKG--FTKDMAL 151
Query: 151 RFSFGQIVHNHVLQMGF-QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
++ G+++ NH + GF N+ + I +++ G ++ + K+FD M
Sbjct: 152 KY--GKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFD------------MG 197
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
G+ + VTW +LS + R R EE+ LF M K+
Sbjct: 198 DGWEV-----------------------VTWNVVLSGYNRFKRYEESKRLFIEMEKKCEC 234
Query: 270 VGAEAIAVVL--SVCADLAADHMGKVIHGFVIKGGF-EDYVFVKNALICVYGKHGDVKVA 326
V ++ +VL S C+ L GK I+ IK G E + ++NALI ++ G++ A
Sbjct: 235 VSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAA 294
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+ +F E++ ++++SW +++T +A D A + F Q+ + D +SW+A+I
Sbjct: 295 RGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERD--------YVSWTAMIDG 346
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
+ R +E L LFR MQ++ V + T+ +L+ CA AL +G ++ + + +
Sbjct: 347 YLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKND 406
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+ N L++MY KCG +E+ +F +++KKD TW +MI G NG GE AL F M+E
Sbjct: 407 TFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLE 466
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
A PD + ++ V+ AC+H GLV +G+ F M + I+P + HY CMVDLLGRAG L+
Sbjct: 467 ASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLK 526
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
EA +++ NMP++PN+ VWG+LL +CR+HKN +AE A++I L E Y+LL NIYA
Sbjct: 527 EALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYA 586
Query: 627 ASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELAL 686
A +W++ VR +G+KK+ G S +E+ ++ F +G+ K + LE +
Sbjct: 587 ACKKWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQ 646
Query: 687 QMENKGCVPDN 697
+ N G PD
Sbjct: 647 DLSNAGYSPDT 657
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 73/186 (39%), Gaps = 49/186 (26%)
Query: 396 ALDLFRKMQLAKVVANSVTIS--GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
+L LF K ++ +S S LL C +N +IH ++ ++ N L L
Sbjct: 17 SLSLFLKRMISNTPLHSFVKSPISLLETCNTMYEIN---QIHSQTIKTGLSSNHLF---L 70
Query: 454 LNMYMKCGCLEEGHL-----VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
+ + C E G + VF++I + + WN+MI GY E+ ++ ++ M+
Sbjct: 71 TKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHN 130
Query: 509 FKPDGVAFVAVLSACS-------------HA-----------------------GLVNEG 532
KPDG F +L + HA GLVN
Sbjct: 131 IKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYA 190
Query: 533 RRIFDM 538
R+IFDM
Sbjct: 191 RKIFDM 196
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 221/679 (32%), Positives = 359/679 (52%), Gaps = 44/679 (6%)
Query: 36 HLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
H+L+ C + + H + G ++ F+ ++++Y+R G L +A +F+
Sbjct: 122 HVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQR 181
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKM------RKLGVLGDGFTFPLVIRACKFMG 146
+ WNSI+ +V + AL L+ KM + D + ++ AC G
Sbjct: 182 GIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPAC---G 238
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
S + + VH + ++ G +V + N LI YAK G M ++ K+F+ + K+ +SWN
Sbjct: 239 SLK-AVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWN 297
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
M +G++ + + A ELFK M E + + VTWT++++ +++ G E +++F M
Sbjct: 298 AMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFS 357
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
G I VLS CA L A G IH + +K N L+ + G
Sbjct: 358 GSLPNCVTIISVLSACASLGAFSQGMEIHAYSLK----------NCLLTLDNDFGG---- 403
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
E+++++ +NALI Y++ A +F + +E NV++W+ +IG
Sbjct: 404 -------EDEDLMVYNALIDMYSKCRSFKAARSIFDDIP------LEERNVVTWTVMIGG 450
Query: 387 FASNGRGEEALDLFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM- 443
A G +AL LF +M + V N+ TIS +L CA AA+ IG++IH +V+R
Sbjct: 451 HAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQY 510
Query: 444 -NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFE 502
+ V N L+NMY KCG ++ VF+ + +K I+W SM++GYGM+G G AL F+
Sbjct: 511 DSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFD 570
Query: 503 EMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRA 562
+M +AGF PD + F+ VL ACSH G+V++G FD M ++ + P+ EHYA +DLL R
Sbjct: 571 KMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARF 630
Query: 563 GLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLS 622
G L +A VK+MPMEP A VW LL++CR+H N ++AE +++ + E GSY L+S
Sbjct: 631 GRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLIS 690
Query: 623 NIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLE 682
NIYA +GRW+D A++R K G+KK G SW++ ++ F G+ + +LE
Sbjct: 691 NIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLE 750
Query: 683 ELALQMENKGCVPDNDIIL 701
L +++ G VP+ + L
Sbjct: 751 SLIDRIKAMGYVPETNFAL 769
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 145/520 (27%), Positives = 260/520 (50%), Gaps = 58/520 (11%)
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
S ++ WN ++R ++ G ++A+ + +M + G D FT P V++AC + S+R
Sbjct: 79 PSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYR---- 134
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR---VKNYISWNMMFS 210
G H + GF+ NV I N L+ MY++ G + ++ +FD++ + + ISWN + S
Sbjct: 135 CGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVS 194
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
+ + AL+LF +M L E + T + D++
Sbjct: 195 AHVKSSNAWTALDLFSKMTLIVHE-------------------KPTNERSDII------- 228
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+I +L C L A K +HG I+ G VFV NALI Y K G ++ A +F
Sbjct: 229 ---SIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVF 285
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP-NVISWSAVIGAFAS 389
+ +E K++VSWNA++ Y+++G A E+F + K + P ++++W+AVI ++
Sbjct: 286 NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKEN-----IPLDMVTWTAVIAGYSQ 340
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM------ 443
G EAL++FR+M + + N VTI +LS CA A + G EIH + ++ +
Sbjct: 341 RGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDND 400
Query: 444 ----NKNILVQNGLLNMYMKCGCLEEGHLVFEQI--EKKDLITWNSMISGYGMNGLGENA 497
+++++V N L++MY KC + +F+ I E+++++TW MI G+ G +A
Sbjct: 401 FGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 460
Query: 498 LATFEEMIEA--GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA-C 554
L F EMI G P+ +L AC+H + G++I ++R + + A C
Sbjct: 461 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANC 520
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
++++ + G + A + +M + +A W +++ MH
Sbjct: 521 LINMYSKCGDVDTARHVFDSMS-QKSAISWTSMMTGYGMH 559
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 194/436 (44%), Gaps = 83/436 (19%)
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL-SSHARCGRLEETMDLF 260
+IS + +G ++ GA + + + LE + P+ W +LL H + GRL+ +++
Sbjct: 47 FISPRSLGTGVVASYLACGATD-YALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVS 105
Query: 261 DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
M + G + + VL C +L + G HG + GFE VF+ NAL+ +Y +
Sbjct: 106 CRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC 165
Query: 321 GDVKVAQNLFSEIEEK---NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
G ++ A +F EI ++ +++SWN++++++ ++ A+++FS++ + E+P
Sbjct: 166 GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLI---VHEKP-- 220
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
+N R ++ ++I +L C A+ +E+HG+
Sbjct: 221 -----------TNER-----------------SDIISIVNILPACGSLKAVPQTKEVHGN 252
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM------------- 484
+R ++ V N L++ Y KCG +E VF +E KD+++WN+M
Sbjct: 253 AIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAA 312
Query: 485 ----------------------ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
I+GY G AL F +MI +G P+ V ++VLSA
Sbjct: 313 FELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSA 372
Query: 523 CSHAGLVNEGRRIFDMMVREFRI---------EPQMEHYACMVDLLGRAGLLQEASDIVK 573
C+ G ++G I ++ + + + Y ++D+ + + A I
Sbjct: 373 CASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFD 432
Query: 574 NMPMEP-NAYVWGTLL 588
++P+E N W ++
Sbjct: 433 DIPLEERNVVTWTVMI 448
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 223/740 (30%), Positives = 369/740 (49%), Gaps = 131/740 (17%)
Query: 37 LLQQC---KTIHQLKQVHNQLI-----VTGANASAFLAA--RVLSIYARFGRLFDARNVF 86
LL+ C K++ + K +H L+ N + F +++ +Y L AR+VF
Sbjct: 15 LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELKIARHVF 74
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+ P K+ +LWN ++R NG YE A+ LY KM G+ + FTFP V++AC +
Sbjct: 75 DKMPHRPKNV-VLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALK 133
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
S G+ +H + ++ + NV++ L+ YAK G + D+ ++FDK+ ++ ++WN
Sbjct: 134 ----EASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWN 189
Query: 207 MMFSGFALNFDCDGALELFKRMELE----------------------------------- 231
M SGF+L+ +G+ + R+ ++
Sbjct: 190 SMISGFSLH---EGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFC 246
Query: 232 ---GLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI------------- 275
G + V T +L + +C ++ +FDMM EV A+
Sbjct: 247 VRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREA 306
Query: 276 -------------AVVLS---------VCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
+VLS VCA+L G +H + IK GF + V N L
Sbjct: 307 LELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTL 366
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ +Y K G + A F+E++ ++ VS+ A+I+ Y + G +E + +F +
Sbjct: 367 LSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLE---------- 416
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
MQL+ + T++ +L CA A L+ G
Sbjct: 417 -----------------------------MQLSGINPEKATLASVLPACAHLAGLHYGSC 447
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
H + + + ++ N L++MY KCG ++ VF+++ K+ +++WN+MI YG++G+
Sbjct: 448 SHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGI 507
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
G AL F+ M G KPD V F+ ++SACSH+GLV EG+ F+ M ++F I P+MEHYA
Sbjct: 508 GLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYA 567
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
CMVDLL RAGL +E ++ MP+EP+ VWG LL++CR++KN ++ E ++ +I L E
Sbjct: 568 CMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPE 627
Query: 614 TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF-SSGNSLQS 672
+TG+++LLSN+Y+A GRW+DAA+VR + K +G +K G SWIE+ +H F G
Sbjct: 628 STGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGGGYRSHP 687
Query: 673 DLKNVCEVLEELALQMENKG 692
L + L+EL ++M+ G
Sbjct: 688 QLTQISNKLDELLVEMKRLG 707
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 215/665 (32%), Positives = 352/665 (52%), Gaps = 57/665 (8%)
Query: 51 HNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSN 110
H + +G ++ F+ V+S+Y + G L A N+F+ + WNS++ +
Sbjct: 282 HATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWA 341
Query: 111 GLYENALKLYVKMRKLGVLG-DGFTFPLVIRAC-KFMGSFRFRFSFGQIVHNHVLQMGFQ 168
AL L+ KM ++ D + ++ AC S R G+ VH ++ G
Sbjct: 342 SDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLR-----GRQVHGFSIRSGLV 396
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+V + N ++ MYAK G+M ++ K+F +++ K+ +SWN M +G++ + AL LF+RM
Sbjct: 397 DDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERM 456
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E +E + VTWT++++ +A+ G+ E +D+F M G + +LS C + A
Sbjct: 457 TEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGAL 516
Query: 289 HMGKVIHGFVIK---------GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
GK H + IK G +D + V N LI +Y K +VA+ +F + K+
Sbjct: 517 LHGKETHCYAIKFILNLDGPDPGADD-LKVINGLIDMYAKCQSTEVARKMFDSVSPKD-- 573
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
+V++W+ +IG +A +G AL L
Sbjct: 574 -----------------------------------RDVVTWTVMIGGYAQHGDANNALQL 598
Query: 400 FRKM-QLAKVV-ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL-VQNGLLNM 456
F M ++ K + N T+S L CA AAL GR++H +V+R +L V N L++M
Sbjct: 599 FSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDM 658
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y K G ++ +VF+ + +++ ++W S+++GYGM+G GE+AL F+EM + PDG+ F
Sbjct: 659 YSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITF 718
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
+ VL ACSH+G+V+ G F+ M ++F ++P EHYACMVDL GRAG L EA ++ MP
Sbjct: 719 LVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMP 778
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAK 636
MEP VW LL++CR+H N ++ E A+++ L + GSY LLSNIYA + RW+D A+
Sbjct: 779 MEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLSNIYANARRWKDVAR 838
Query: 637 VRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
+R + K G+KK G SWI+ ++ + F G+ + + E L +L +++ G VP
Sbjct: 839 IRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQIYETLADLIQRIKAIGYVPQ 898
Query: 697 NDIIL 701
L
Sbjct: 899 TSFAL 903
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/587 (29%), Positives = 281/587 (47%), Gaps = 66/587 (11%)
Query: 27 NNSLLDCFD---HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
N LL C L++C ++ K +H Q I+ G LA ++ Y A
Sbjct: 154 NTRLLSCATIPITALKECNSLAHAKLLHQQSIMQGL--LFHLATNLIGTYIASNSTAYAI 211
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
+ E P SS WN ++R + G + LY +M+ LG D +TFP V +AC
Sbjct: 212 LLLERLP-PSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKAC- 269
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV---RVK 200
+ S G +H V + GF NV + N ++ MY K G + + +FD + ++
Sbjct: 270 ---ANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQ 326
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGL-EPNFVTWTSLLSSHARCGRLEETMDL 259
+ +SWN + S + D + AL LF +M L P+ ++
Sbjct: 327 DLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVIS-------------------- 366
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
+ +L CA LAA G+ +HGF I+ G D VFV NA++ +Y K
Sbjct: 367 ---------------LVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAK 411
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
G ++ A +F ++ K++VSWNA++T Y++AG + A+ +F E++ ++E +V++
Sbjct: 412 CGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLF---ERMTEENIEL-DVVT 467
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVV 439
W+AVI +A G+G EALD+FR+M N VT+ LLS C AL G+E H + +
Sbjct: 468 WTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAI 527
Query: 440 RVSMN--------KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK--DLITWNSMISGYG 489
+ +N ++ V NGL++MY KC E +F+ + K D++TW MI GY
Sbjct: 528 KFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYA 587
Query: 490 MNGLGENALATFEEM--IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
+G NAL F M ++ KP+ L AC+ + GR++ ++R F
Sbjct: 588 QHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSV 647
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+ C++D+ ++G + A + NMP + NA W +L+ MH
Sbjct: 648 MLFVANCLIDMYSKSGDVDTAQIVFDNMP-QRNAVSWTSLMTGYGMH 693
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 214/701 (30%), Positives = 364/701 (51%), Gaps = 59/701 (8%)
Query: 6 LHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFL 65
L P + SNP++P T NN L+ +C ++ QLKQ H +I TG + +
Sbjct: 10 LSLPRHPNFSNPNQP----TTNNERSRHTISLIDRCSSLRQLKQTHAHMIRTGMFSDPYS 65
Query: 66 AARVLSIYA--RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM 123
A+++ +I A F L AR VF+ P + +S WN+++R S ++ ++ M
Sbjct: 66 ASKLFAIAALSSFASLEYARKVFDEIP---QPNSFTWNTLIRAYASGPDPVCSIWAFLDM 122
Query: 124 --RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
+ + +TFP +I+A + S S GQ +H ++ +V + N LI Y
Sbjct: 123 VSSESQCYPNKYTFPFLIKAAAEVSSL----SLGQSLHGMAIKSAVGSDVFVANSLIHCY 178
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
G + + K+F ++ E + V+W
Sbjct: 179 FSCGDLDSACKVFTTIK-----------------------------------EKDVVSWN 203
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
S+++ + G ++ ++LF M ++ + VLS CA + G+ + ++ +
Sbjct: 204 SMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEEN 263
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
+ + NA++ +Y K G ++ A+ LF +EEK+ V+W ++ YA + + A EV
Sbjct: 264 RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVL 323
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA-NSVTISGLLS 420
+ + K D +++W+A+I A+ NG+ EAL +F ++QL K + N +T+ LS
Sbjct: 324 NAMPKKD--------IVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLS 375
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
CA+ AL +GR IH ++ + + N V + L++MY KCG LE+ VF +EK+D+
Sbjct: 376 ACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFV 435
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
W++MI G M+G G A+ F +M EA KP+GV F V ACSH GLV+E +F M
Sbjct: 436 WSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKME 495
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
+ I P+ +HYAC+VD+LGR+G L++A ++ MP+ P+ VWG LL +C++H N +A
Sbjct: 496 SSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLA 555
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
E +++ L G+++LLSNIYA SG+W++ +++R + GLKK G S IE+
Sbjct: 556 EMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGM 615
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
IH F SG++ + V L E+ ++++ G P+ +L
Sbjct: 616 IHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVL 656
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 208/634 (32%), Positives = 348/634 (54%), Gaps = 54/634 (8%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
F L A +VFET + + L+WN+++R + + ++L LYV M LG+L + +
Sbjct: 9 PHFDGLPYATSVFETIQ---EPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSY 65
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
TFP ++++C +F + GQ +H VL++GF ++++ LI MY + ++ D++K+
Sbjct: 66 TFPFLLKSCAKSKTF----TEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKV 121
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FD+ ++ +S+ + +G+A D A +LF + ++ + V+W +++S +A G
Sbjct: 122 FDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVK----DVVSWNAMISGYAETGCY 177
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
+E ++LF+ M K + VLS CA + +G+ +H +V GF+
Sbjct: 178 KEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFD--------- 228
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
N+ NALI Y++ G + A +F L D
Sbjct: 229 ----------------------SNLKIVNALIDLYSKCGEVETACGLFQGLSYKD----- 261
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
VISW+ +IG + +EAL LF++M + N VT+ +L CA A++IGR
Sbjct: 262 ---VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRW 318
Query: 434 IHGHV---VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
IH ++ ++ N + L + L++MY KCG +E H VF + K L +WN+MI G+ M
Sbjct: 319 IHVYIDKRLKGVTNASSL-RTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAM 377
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
+G + + F M + G +PD + FV +LSACSH+G+++ GR IF M +++++ P++E
Sbjct: 378 HGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLE 437
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL 610
HY CM+DLLG +GL +EA +++ M MEP+ +W +LL +C+MH N ++AE+ A + +
Sbjct: 438 HYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKI 497
Query: 611 ITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSL 670
E SY+LLSNIYA++GRWED A++R K +KKV G S IEV + F G+
Sbjct: 498 EPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKF 557
Query: 671 QSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ + +LEE+ + +E G VPD +L EM
Sbjct: 558 HPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEM 591
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 146/573 (25%), Positives = 237/573 (41%), Gaps = 150/573 (26%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F LL+ C KT + +Q+H Q++ G + ++ ++S+Y + RL DA VF+ +
Sbjct: 67 FPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSS 126
Query: 91 F-----------------DCKSSSLL-----------WNSILRVNVSNGLYENALKLYVK 122
D +S+ L WN+++ G Y+ AL+L+ +
Sbjct: 127 HRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEE 186
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M K+ V D T+ V+ AC GS G+ VH+ V GF N+ IVN LI +Y+
Sbjct: 187 MMKMNVRPDESTYVTVLSACAHSGSIE----LGRQVHSWVDDHGFDSNLKIVNALIDLYS 242
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K G++ + LF + K+ ISWN + G+ AL LF+ M G PN VT S
Sbjct: 243 KCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 302
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK-- 300
VL CA L A +G+ IH ++ K
Sbjct: 303 -----------------------------------VLPACAHLGAIDIGRWIHVYIDKRL 327
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G + ++ +LI +Y K GD++ A +F+ + K++ SWNA+I +A G D + ++
Sbjct: 328 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDL 387
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
FS++ K+ + + +T GLLS
Sbjct: 388 FSRMRKIG---------------------------------------IEPDDITFVGLLS 408
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
C+ S L++GR H+ R SM ++ + L + GC
Sbjct: 409 ACSHSGMLDLGR----HIFR-SMTQDYKMTPKLEHY----GC------------------ 441
Query: 481 WNSMISGYGMNGLGENALATFEEMIEA-GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
MI G +GL + A EEMI +PDGV + ++L AC G V +
Sbjct: 442 ---MIDLLGHSGLFKEA----EEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNL 494
Query: 540 VREFRIEPQ-MEHYACMVDLLGRAGLLQEASDI 571
+ +IEP+ Y + ++ AG ++ + I
Sbjct: 495 I---KIEPENPSSYILLSNIYASAGRWEDVARI 524
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 233/793 (29%), Positives = 379/793 (47%), Gaps = 145/793 (18%)
Query: 34 FDHLLQQC----KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA 89
F +QC K+ H +++H QLI++G ++S FL +L +Y+ G DA VF+
Sbjct: 10 FYDAFKQCSFTHKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQET 69
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL------------GVLGDGF---- 133
+ WN+++R VS+ +A KL+ +M G +GF
Sbjct: 70 H---HRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRS 126
Query: 134 --TFPLVIRACKFMGSFRFRFSFGQI---------------VHNHVLQMGFQGNVHIVNE 176
TF L+IR G FSF + +H V ++GF I N
Sbjct: 127 FETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNS 186
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL------ 230
++GMY K G + + +F + + WN M G++ + AL++F RM
Sbjct: 187 VVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSW 246
Query: 231 -------------------------EGLEPNFVTWTSLLSS-------------HARCGR 252
+G PNF+T+ S+LS+ HAR R
Sbjct: 247 NTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILR 306
Query: 253 LEETMD-----------------------------------------------------L 259
+E ++D L
Sbjct: 307 MEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALIL 366
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
F+ MR+ + + + +L VC+ G+++HG+ IK G V NA+I +Y K
Sbjct: 367 FNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAK 426
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
GD A +F + +N +SW A+IT+++ +G +A F M N+++
Sbjct: 427 CGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDM--------MPERNIVT 478
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVV 439
W++++ + NG EE L L+ M+ V + +T + + CA+ A + +G ++ H
Sbjct: 479 WNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHAT 538
Query: 440 RVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
+ ++ N+ V N ++ MY +CG ++E F+ I+ KDLI+WN+M++ + NGLG +
Sbjct: 539 KFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVID 598
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
TFE+M++ KP+ +++V+VLS CSH GLV EG+ FD M R F I P EH++CMVDLL
Sbjct: 599 TFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLL 658
Query: 560 GRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYM 619
GRAGLL++A D+++ MP +PNA VW LL SCR+H + +AE A ++ L E + Y+
Sbjct: 659 GRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYV 718
Query: 620 LLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCE 679
LLSN+Y+ SG ++ A +R K KG++ G SWIEV ++H+F+ + +K V
Sbjct: 719 LLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYL 778
Query: 680 VLEELALQMENKG 692
LEE+ +E+ G
Sbjct: 779 KLEEMMKMIEDTG 791
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 221/679 (32%), Positives = 359/679 (52%), Gaps = 44/679 (6%)
Query: 36 HLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
H+L+ C + + H + G ++ F+ ++++Y+R G L +A +F+
Sbjct: 15 HVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQR 74
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKM------RKLGVLGDGFTFPLVIRACKFMG 146
+ WNSI+ +V + AL L+ KM + D + ++ AC G
Sbjct: 75 GIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPAC---G 131
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
S + + VH + ++ G +V + N LI YAK G M ++ K+F+ + K+ +SWN
Sbjct: 132 SLK-AVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWN 190
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
M +G++ + + A ELFK M E + + VTWT++++ +++ G E +++F M
Sbjct: 191 AMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFS 250
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
G I VLS CA L A G IH + +K N L+ + G
Sbjct: 251 GSLPNCVTIISVLSACASLGAFSQGMEIHAYSLK----------NCLLTLDNDFGG---- 296
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
E+++++ +NALI Y++ A +F + +E NV++W+ +IG
Sbjct: 297 -------EDEDLMVYNALIDMYSKCRSFKAARSIFDDIP------LEERNVVTWTVMIGG 343
Query: 387 FASNGRGEEALDLFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM- 443
A G +AL LF +M + V N+ TIS +L CA AA+ IG++IH +V+R
Sbjct: 344 HAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQY 403
Query: 444 -NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFE 502
+ V N L+NMY KCG ++ VF+ + +K I+W SM++GYGM+G G AL F+
Sbjct: 404 DSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFD 463
Query: 503 EMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRA 562
+M +AGF PD + F+ VL ACSH G+V++G FD M ++ + P+ EHYA +DLL R
Sbjct: 464 KMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARF 523
Query: 563 GLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLS 622
G L +A VK+MPMEP A VW LL++CR+H N ++AE +++ + E GSY L+S
Sbjct: 524 GRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLIS 583
Query: 623 NIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLE 682
NIYA +GRW+D A++R K G+KK G SW++ ++ F G+ + +LE
Sbjct: 584 NIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLE 643
Query: 683 ELALQMENKGCVPDNDIIL 701
L +++ G VP+ + L
Sbjct: 644 SLIDRIKAMGYVPETNFAL 662
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/491 (28%), Positives = 243/491 (49%), Gaps = 58/491 (11%)
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M + G D FT P V++AC + S+R G H + GF+ NV I N L+ MY+
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYR----CGSAFHGLICCNGFESNVFICNALVAMYS 56
Query: 183 KMGQMSDSFKLFDKVR---VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
+ G + ++ +FD++ + + ISWN + S + + AL+LF +M L E
Sbjct: 57 RCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHE----- 111
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
+ T + D++ +I +L C L A K +HG I
Sbjct: 112 --------------KPTNERSDII----------SIVNILPACGSLKAVPQTKEVHGNAI 147
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
+ G VFV NALI Y K G ++ A +F+ +E K++VSWNA++ Y+++G A E
Sbjct: 148 RNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFE 207
Query: 360 VFSQLEKLDGGSMERP-NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
+F + K + P ++++W+AVI ++ G EAL++FR+M + + N VTI +
Sbjct: 208 LFKNMRKEN-----IPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISV 262
Query: 419 LSVCAESAALNIGREIHGHVVRVSM----------NKNILVQNGLLNMYMKCGCLEEGHL 468
LS CA A + G EIH + ++ + +++++V N L++MY KC +
Sbjct: 263 LSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARS 322
Query: 469 VFEQI--EKKDLITWNSMISGYGMNGLGENALATFEEMIEA--GFKPDGVAFVAVLSACS 524
+F+ I E+++++TW MI G+ G +AL F EMI G P+ +L AC+
Sbjct: 323 IFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACA 382
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYA-CMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
H + G++I ++R + + A C++++ + G + A + +M + +A
Sbjct: 383 HLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMS-QKSAIS 441
Query: 584 WGTLLNSCRMH 594
W +++ MH
Sbjct: 442 WTSMMTGYGMH 452
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 194/578 (33%), Positives = 318/578 (55%), Gaps = 64/578 (11%)
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ VH+ ++ + N + +L+ YA + ++ + K+FD++ +N I N+M + N
Sbjct: 60 RTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNN 119
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
+++F M ++P+ T+
Sbjct: 120 GFYREGIQVFGTMCSCHVKPDHYTF----------------------------------- 144
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
VL C+ +GK IHG K G +FV N L+ +YGK G + A+ + E+
Sbjct: 145 PCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 204
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKL----DGGSME------------------ 373
+++VSWN+L+ YA+ D+A+EV ++E + D G+M
Sbjct: 205 RDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVK 264
Query: 374 -------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
+ +++SW+ +IG + N EA++L+ M+ ++V+I+ +L C +++
Sbjct: 265 DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTS 324
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
AL++G++IHG++ R + N+L++N L++MY KCGCL+ VFE ++ +D+++W +MIS
Sbjct: 325 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMIS 384
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
YG +G G +A+A F +M ++G PD +AFV L+ACSHAGL+ EGR F +M ++I
Sbjct: 385 AYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 444
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
P++EH ACMVDLLGRAG ++EA ++ MPMEPN VWG LL +CR+H NTD+ A +
Sbjct: 445 PRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADK 504
Query: 607 IFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSS 666
+F L E +G Y+LLSNIYA +GRWE+ +R K+KGLKK G S +EV R IH F
Sbjct: 505 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLV 564
Query: 667 GNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G+ + L+ L +M+ G VPD++ L ++
Sbjct: 565 GDRSHPQSAEIYRELDVLVKKMKELGYVPDSESALHDV 602
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 197/401 (49%), Gaps = 44/401 (10%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
+L + L+ VH+++I ++ L +++ YA + AR VF+ P +
Sbjct: 48 QVLDTYPDLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIP---ER 104
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ ++ N ++R V+NG Y ++++ M V D +TFP V++AC G+ G
Sbjct: 105 NVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNI----VIG 160
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ +H ++G + + N L+ MY K G +S++ + D++ ++ +SWN + +G+A N
Sbjct: 161 KKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQN 220
Query: 216 FDCDGALELFKRME----------LEGLEP-----------------------NFVTWTS 242
D ALE+ + ME + L P + V+W
Sbjct: 221 QRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNV 280
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
++ + + E ++L+ M G E A +I VL C D +A +GK IHG++ +
Sbjct: 281 MIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 340
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
+ ++NALI +Y K G + A+++F ++ +++VSW A+I++Y +G +AV +FS
Sbjct: 341 LIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 400
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+++ D G + P+ I++ + A + G EE F+ M
Sbjct: 401 KMQ--DSGLV--PDSIAFVTTLAACSHAGLLEEGRSCFKLM 437
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 27/236 (11%)
Query: 34 FDHLLQQCKTIHQLKQVHN-----QLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
FD L+ C+ + +K H+ L+ +N + V ++ + G
Sbjct: 223 FDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMG----------- 271
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
K S + WN ++ V + N + A++LY M G D + V+ AC +
Sbjct: 272 -----KKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSAL 326
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
S G+ +H ++ + N+ + N LI MYAK G + + +F+ ++ ++ +SW M
Sbjct: 327 ----SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAM 382
Query: 209 FSGFALN-FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
S + + CD A+ LF +M+ GL P+ + + + L++ + G LEE F +M
Sbjct: 383 ISAYGFSGRGCD-AVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 437
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 227/734 (30%), Positives = 372/734 (50%), Gaps = 115/734 (15%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LL CK+ L +++H + + +A +L++YA+ G + +AR VF+
Sbjct: 250 LLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKME--- 306
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
S + W I+ G E A +++ KM++ GV+ + T+ V+ A F G ++
Sbjct: 307 TKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNA--FSGPAALKW- 363
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ VH+H+L G + ++ + L+ MYAK G D ++F+K+ ++ I+WN M G A
Sbjct: 364 -GKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 422
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWT-------------------------------- 241
+ + A E++ +M+ EG+ PN +T+
Sbjct: 423 EGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDIS 482
Query: 242 ---SLLSSHARCGRLEETMDLFDMMRKRGI-------------EVGAEAIAV-------- 277
+L+S +ARCG +++ LF+ M ++ I +GAEA+AV
Sbjct: 483 VQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAG 542
Query: 278 ----------VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
+L+ C+ AA G+ IH VI+ G V N L+ +Y G VK
Sbjct: 543 LKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVK--- 599
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+A +VF ++ + D +++++A+IG +
Sbjct: 600 ----------------------------DARQVFDRMTQRD--------IVAYNAMIGGY 623
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
A++ G+EAL LF ++Q + + VT +L+ CA S +L +EIH V++ +
Sbjct: 624 AAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDT 683
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
+ N L++ Y KCG + LVF+++ K+++I+WN++I G +G G++ L FE M
Sbjct: 684 SLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKME 743
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
G KPD V FV++LSACSHAGL+ EGRR F M R+F I P +EHY CMVDLLGRAG L E
Sbjct: 744 GIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDE 803
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
++K MP + N +WG LL +CR+H N VAE A L + Y+ LS++YAA
Sbjct: 804 VEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAA 863
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
+G W+ AAK+R + +G+ K G+SWIEV K+H F + + + + + L++L
Sbjct: 864 AGMWDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHA 923
Query: 688 MENKGCVPDNDIIL 701
M+ +G VPD ++
Sbjct: 924 MKMEGYVPDTRSVM 937
Score = 197 bits (500), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 155/638 (24%), Positives = 285/638 (44%), Gaps = 122/638 (19%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L++C + L ++VH +I + ++++Y + G + +AR V+
Sbjct: 147 MLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNH-T 205
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV-LGDGFTFPLVIRACKFMGSFRFRF 152
+ + WN+++ V G E ALKL +M++ G+ LG T L + +CK +
Sbjct: 206 ERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRL-LSSCKSPSALEC-- 262
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H ++ +V++ N ++ MYAK G + ++ ++FDK+ K+ +S
Sbjct: 263 --GREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVS-------- 312
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
WT ++ +A CG E ++F M++ G+
Sbjct: 313 ---------------------------WTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNR 345
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
VL+ + AA GK +H ++ G E D+ V
Sbjct: 346 ITYINVLNAFSGPAALKWGKTVHSHILNAGHE----------------SDLAVG------ 383
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
AL+ YA+ G + +VF +L D +I+W+ +IG A G
Sbjct: 384 ---------TALVKMYAKCGSYKDCRQVFEKLVNRD--------LIAWNTMIGGLAEGGN 426
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
EEA +++ +MQ ++ N +T LL+ C AL+ GREIH VV+ +I VQN
Sbjct: 427 WEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNA 486
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++MY +CG +++ L+F ++ +KD+I+W +MI G +GLG ALA F++M +AG KP+
Sbjct: 487 LISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPN 546
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
V + ++L+ACS ++ GRRI ++ E + +V++ G +++A +
Sbjct: 547 RVTYTSILNACSSPAALDWGRRIHQQVI-EAGLATDAHVANTLVNMYSMCGSVKDARQVF 605
Query: 573 KNMP----------------------------------MEPNAYVWGTLLNSCRMHKNTD 598
M ++P+ + +LN+C + +
Sbjct: 606 DRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLE 665
Query: 599 VAEAMASQIF--GLITETTGSYMLLSNIYAASGRWEDA 634
A+ + S + G +++T+ L+S YA G + DA
Sbjct: 666 WAKEIHSLVLKDGYLSDTSLGNALVST-YAKCGSFSDA 702
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 3/184 (1%)
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
+ A+D+ + +Q NS +L C E L GRE+H H+++ + N L
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 454 LNMYMKCGCLEEGHLVFEQIE--KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
+NMY++CG +EE V+ ++ ++ + +WN+M+ GY G E AL EM + G
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
+ +LS+C + GR I + + R+ + C++++ + G + EA ++
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIH-VEAMKARLLFDVNVANCILNMYAKCGSIHEAREV 301
Query: 572 VKNM 575
M
Sbjct: 302 FDKM 305
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 221/683 (32%), Positives = 363/683 (53%), Gaps = 60/683 (8%)
Query: 10 HQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARV 69
H S + F+ T S C +L + CK++ LKQ+H Q+ G + ++
Sbjct: 17 HGLSRRSKFSTFTNPTTGLSQQSCISYL-KSCKSMTHLKQIHAQIFRVGLHQDIVSLNKL 75
Query: 70 LSIYARF--GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG 127
++ G L A +F+ + C L++N I++ G Y+ L L+ K+R+ G
Sbjct: 76 MAFCTDPFNGNLNYAEKMFKYIRYPC---LLIYNLIIKAFAKKGNYKRTLVLFSKLREDG 132
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
+ D FT+P V +A ++G S + + V + G + + ++ N LI MYA++ +
Sbjct: 133 LWPDNFTYPFVFKAIGYLGEV----SKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLA-L 187
Query: 188 SDSFK-LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
+D K LFD++ ++ ISWN+M +S
Sbjct: 188 TDVMKMLFDEMPDRDVISWNVM-----------------------------------ISG 212
Query: 247 HARCGRLEETMDLFDMMRKRGIEVGAEAIAV-VLSVCADLAADHMGKVIHGFVIKGGFED 305
+ +C R E+ +++F M++ + EA V LS C L +GK IH +V + +
Sbjct: 213 YVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYV-RDNVKF 271
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
+ NAL+ +Y K G + +A+ +F E+ KN++ W +++ YA G +EA E+F
Sbjct: 272 TPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFE--- 328
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
GS R +V+ W+A+I + R +EA+ LFR+MQ+ KV + + LL+ CA++
Sbjct: 329 ----GSPIR-DVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQT 383
Query: 426 AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMI 485
A+ G+ IH + + + +V L+ MY KCG +E+ +F + KD +W S+I
Sbjct: 384 GAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSII 443
Query: 486 SGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRI 545
G MNG AL F +M +AG +PD + F+ VLSACSH GLV EGR+ F+ M E++I
Sbjct: 444 CGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQI 503
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAY---VWGTLLNSCRMHKNTDVAEA 602
+P++EHY C+VDLLGRAGLL EA +++K +P E A ++G+LL++CR++ N ++ E
Sbjct: 504 KPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEMGER 563
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
+A Q+ + + + LL+NIYA + RWED KVR K G+KK G S IEV IH
Sbjct: 564 VAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSIEVDSIIH 623
Query: 663 MFSSGNSLQSDLKNVCEVLEELA 685
F SG+ +++ + +L +A
Sbjct: 624 EFFSGHPSHPEMREIYYMLNIMA 646
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 215/650 (33%), Positives = 353/650 (54%), Gaps = 66/650 (10%)
Query: 111 GLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN 170
G ENA++L +K + + T+ V++ C + SF + G+ VH+ + +
Sbjct: 80 GDLENAMELICMCKKSEL--ETKTYSSVLQLCAGLKSF----TDGKKVHSIIKSNSVGVD 133
Query: 171 VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
+ +L+ YA G + + ++FD + KN WN M S +A D ++ LFK M
Sbjct: 134 EALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVE 193
Query: 231 EGLE---P-------------NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
+G+E P + ++W S++S + G E + ++ M GI+V
Sbjct: 194 KGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLAT 253
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
I VL CA+ +GK +H IK FE + N L+ +Y K GD+ A +F ++
Sbjct: 254 IISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 313
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEK----------------------LDGG-- 370
E+N+VSW ++I Y G D A+++ Q+EK LD G
Sbjct: 314 ERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKD 373
Query: 371 --------SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA----------NS 412
+ME N+ +A++ +A G E A +F M + +++ +S
Sbjct: 374 VHDYIKANNME-SNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDS 432
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
T++ +L CA +AL G+EIHG+++R + + V N L+++Y+KCG L L+F+
Sbjct: 433 RTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 492
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
I KDL++W MI+GYGM+G G A+ATF EM +AG +PD V+F+++L ACSH+GL+ +G
Sbjct: 493 IPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
R F +M +F IEP++EHYACMVDLL R G L +A + ++ +P+ P+A +WG LL CR
Sbjct: 553 WRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCR 612
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
+ + ++AE +A ++F L E +G Y+LL+NIYA + +WE+ ++R +GL+K G
Sbjct: 613 NYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGC 672
Query: 653 SWIEVKRKIHMFSSG-NSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
SWIE+K K+++F SG NS KN+ +L+++ +M+ +G P L
Sbjct: 673 SWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYAL 722
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 205/467 (43%), Gaps = 104/467 (22%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ +LQ C K+ K+VH+ + L +++S YA G L + R VF+T
Sbjct: 102 YSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTME 161
Query: 91 ----------------------------------------------FD--CKSSSLLWNS 102
FD C + WNS
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNS 221
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
++ VSNGL E L +Y +M LG+ D T V+ C G+ S G+ VH+
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGT----LSLGKAVHSLA 277
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
++ F+ ++ N L+ MY+K G + + ++F+K+ +N +SW M +G+ + DGA+
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE------------- 269
+L ++ME EG++ + V TS+L + AR G L+ D+ D ++ +E
Sbjct: 338 KLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMY 397
Query: 270 ---------------------------VG-----AEAIAVVLSVCADLAADHMGKVIHGF 297
+G + +A VL CA L+A GK IHG+
Sbjct: 398 AKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGY 457
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
+++ G+ V NAL+ +Y K G + +A+ LF I K++VSW +I Y G +EA
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+ F+++ D G P+ +S+ +++ A + +G E+ F M+
Sbjct: 518 IATFNEMR--DAGI--EPDEVSFISILYACSHSGLLEQGWRFFYIMK 560
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 108/238 (45%), Gaps = 15/238 (6%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C ++ L K++H ++ G ++ +A ++ +Y + G L AR +F+ P
Sbjct: 438 VLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP--- 494
Query: 94 KSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
S L+ W ++ +G A+ + +MR G+ D +F ++ AC G +
Sbjct: 495 -SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV-KNYISWNMMFSG 211
F I+ N + + ++ + ++ G +S +++ + + + + W + G
Sbjct: 554 RFFYIMKN---DFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCG 610
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGI 268
D + A ++ +R+ E LEP + LL++ +A + EE L + + K+G+
Sbjct: 611 CRNYHDIELAEKVAERV-FE-LEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGL 666
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 365 bits (937), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 217/652 (33%), Positives = 355/652 (54%), Gaps = 70/652 (10%)
Query: 111 GLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ--MGFQ 168
G ENA++L +K + + T+ V++ C + SF + G+ VH+ + +G
Sbjct: 80 GDLENAMELICMCQKSEL--ETKTYGSVLQLCAGLKSF----TDGKKVHSIIKSNSVGVD 133
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
G + + +L+ YA G + + ++FD + KN WN M S +A D ++ LFK M
Sbjct: 134 GALGL--KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIM 191
Query: 229 ELEGLE----------------PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
+G+E + ++W S++S + G E + ++ M GI+V
Sbjct: 192 VEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDL 251
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
I VL CA+ +GK +H IK FE + N L+ +Y K GD+ A +F +
Sbjct: 252 ATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEK 311
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK----------------------LDGG 370
+ E+N+VSW ++I Y G D A+++ Q+EK LD G
Sbjct: 312 MGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNG 371
Query: 371 ----------SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA---------- 410
+ME N+ +A++ +A G E A +F M + +++
Sbjct: 372 KDVHDYIKANNME-SNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKP 430
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
+S T++ +L CA +AL G+EIHG+++R + + V N L+++Y+KCG L L+F
Sbjct: 431 DSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLF 490
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
+ I KDL++W MI+GYGM+G G A+ATF EM +AG +PD V+F+++L ACSH+GL+
Sbjct: 491 DMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLE 550
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
+G R F +M +F IEP++EHYACMVDLL R G L +A + ++ +P+ P+A +WG LL
Sbjct: 551 QGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCG 610
Query: 591 CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVA 650
CR + + ++AE +A ++F L E TG Y+LL+NIYA + +WE+ ++R +GL+K
Sbjct: 611 CRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNP 670
Query: 651 GQSWIEVKRKIHMFSSG-NSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
G SWIE+K K+++F SG NS KN+ +L+++ +M+ +G P L
Sbjct: 671 GCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYAL 722
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 205/467 (43%), Gaps = 104/467 (22%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ +LQ C K+ K+VH+ + L +++S YA G L + R VF+T
Sbjct: 102 YGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTME 161
Query: 91 ----------------------------------------------FD--CKSSSLLWNS 102
FD C + WNS
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNS 221
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
++ VSNGL E L +Y +M LG+ D T V+ C G+ S G+ VH+
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGT----LSLGKAVHSLA 277
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
++ F+ ++ N L+ MY+K G + + ++F+K+ +N +SW M +G+ + DGA+
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE------------- 269
+L ++ME EG++ + V TS+L + AR G L+ D+ D ++ +E
Sbjct: 338 KLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMY 397
Query: 270 ---------------------------VG-----AEAIAVVLSVCADLAADHMGKVIHGF 297
+G + +A VL CA L+A GK IHG+
Sbjct: 398 AKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPACASLSALERGKEIHGY 457
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
+++ G+ V NAL+ +Y K G + +A+ LF I K++VSW +I Y G +EA
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+ F+++ D G P+ +S+ +++ A + +G E+ F M+
Sbjct: 518 IATFNEMR--DAGI--EPDEVSFISILYACSHSGLLEQGWRFFYIMK 560
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 108/238 (45%), Gaps = 15/238 (6%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C ++ L K++H ++ G ++ +A ++ +Y + G L AR +F+ P
Sbjct: 438 VLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP--- 494
Query: 94 KSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
S L+ W ++ +G A+ + +MR G+ D +F ++ AC G +
Sbjct: 495 -SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV-KNYISWNMMFSG 211
F I+ N + + ++ + ++ G +S +++ + + + + W + G
Sbjct: 554 RFFYIMKN---DFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCG 610
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGI 268
D + A ++ +R+ E LEP + LL++ +A + EE L + + K+G+
Sbjct: 611 CRNYHDIELAEKVAERV-FE-LEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGL 666
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 365 bits (937), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 179/525 (34%), Positives = 304/525 (57%), Gaps = 13/525 (2%)
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN 236
LI A+ G++ D+ LF+++ +SWN + +G+ N + A ELF +M N
Sbjct: 328 LITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR----N 383
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
++W +++ +A+ GR EE + L + + G+ ++ + C+++ A G +H
Sbjct: 384 TISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHS 443
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
+K G + F NALI +YGK +++ A+ +FS + K+IVSWN+ + + + L DE
Sbjct: 444 LAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDE 503
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
A F + D +SW+ +I A+A + EA+ F+ M + NS ++
Sbjct: 504 ARNTFDNMLSRDD--------VSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILT 555
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
LL VC A IG++IH +++ M+ ++V N L++MY KCGC + +F+ +E++
Sbjct: 556 ILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEER 614
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D+ TWN++I+GY +GLG A+ ++ M AG P+ V FV +L+ACSHAGLV+EG + F
Sbjct: 615 DIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFF 674
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
M +++ + P EHYACMVDLLGR G +Q A + +MP+EP+ +W LL +C++HKN
Sbjct: 675 KSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKN 734
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
++ + A ++F + G+Y++LSNIY++ G W + A+VR K +G+ K G SW +
Sbjct: 735 AEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQ 794
Query: 657 VKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+K K+H F +G+ ++ + LEEL ++ G VPD + +L
Sbjct: 795 IKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVL 839
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/580 (25%), Positives = 246/580 (42%), Gaps = 101/580 (17%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
++ H +L V+G +AR+ + R GR+ +AR VF+ P + + WNS++
Sbjct: 25 VRHAHGELEVSGC------SARIRDL-GRLGRVGEAREVFDAMP---RRDIIAWNSMISA 74
Query: 107 NVSNGLYENALKLYV-----KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH-N 160
NG+ + A LY MR +L G+ G+++
Sbjct: 75 YCHNGMPDAARDLYDAISGGNMRTGAILLSGYG------------------RLGRVLEAR 116
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
V + N N +I Y + G ++ + +LFD + ++ SWN M +G+ +
Sbjct: 117 RVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVD 176
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
A LF++M E N V+WT ++S + R + D+F M + G+ A LS
Sbjct: 177 ARNLFEKMP----ERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALS 232
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV-KVAQNLFSEIEEKNIV 339
L + + + +K GFE V + A++ VY + V A F + E+N
Sbjct: 233 AVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEY 292
Query: 340 SWN-------------------------------ALITSYAEAGLCDEAVEVFSQLEK-- 366
+W+ ALIT A+ G D+A +F Q+ +
Sbjct: 293 TWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPI 352
Query: 367 ------LDGGSMER---------------PNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
L G M+ N ISW+ +I +A NGR EEAL L +++
Sbjct: 353 VVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHR 412
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
+ ++ + +++ + C+ AL G ++H V+V N N L+ MY KC +E
Sbjct: 413 SGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEY 472
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
VF ++ KD+++WNS ++ N L + A TF+ M+ D V++ ++SA +H
Sbjct: 473 ARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR----DDVSWTTIISAYAH 528
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
A NE F M E ++ + + LLG G L
Sbjct: 529 AEQSNEAMGAFKTMF----CEHELPNSPILTILLGVCGSL 564
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 178/369 (48%), Gaps = 26/369 (7%)
Query: 38 LQQCKTIHQLKQVHNQL---IVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCK 94
L QC I + + Q+ IV NA +++ Y + G + +A+ +F+ PF
Sbjct: 332 LAQCGRIDDARILFEQIPEPIVVSWNA-------LITGYMQNGMVNEAKELFDKMPF--- 381
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
+++ W ++ NG E AL L ++ + G+L + + AC + +
Sbjct: 382 RNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALET---- 437
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G VH+ +++G Q N N LI MY K M + ++F ++ K+ +SWN +
Sbjct: 438 GTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQ 497
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
N D A F M L + V+WT+++S++A + E M F M +
Sbjct: 498 NDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPI 553
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ ++L VC L A +G+ IH IK G + + V NALI +Y K G ++ +F +E
Sbjct: 554 LTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLME 612
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
E++I +WN +IT YA+ GL EA++++ +E G + PN +++ ++ A + G +
Sbjct: 613 ERDIFTWNTIITGYAQHGLGREAIKMYQHMES--AGVL--PNEVTFVGLLNACSHAGLVD 668
Query: 395 EALDLFRKM 403
E F+ M
Sbjct: 669 EGWKFFKSM 677
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 189/446 (42%), Gaps = 77/446 (17%)
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
++G++ ++ ++FD + ++ I+WN M S + N D A +L+ + N T
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAIS----GGNMRTGA 100
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
LLS + R GR+ E +FD M +R
Sbjct: 101 ILLSGYGRLGRVLEARRVFDGMLERN---------------------------------- 126
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
NA+I Y ++GD+ +A+ LF + +++ SWN+++T Y + +A +F
Sbjct: 127 -----TVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLF 181
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
+ M N++SW+ +I + +A D+F KM ++ + + LS
Sbjct: 182 EK--------MPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSA 233
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK-CGCLEEGHLVFEQIEKKDLIT 480
L++ + ++ +++++ +LN+Y + L+ FE + +++ T
Sbjct: 234 VKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYT 293
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV----AVLSACSHAGLVNEGRRIF 536
W++MI+ G + A+A +E D V + A+++ + G +++ R +F
Sbjct: 294 WSTMIAALSHGGRIDAAIAVYER--------DPVKSIACRTALITGLAQCGRIDDARILF 345
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
+ + EP + + ++ + G++ EA ++ MP N W ++ +
Sbjct: 346 EQIP-----EPIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTISWAGMIAGYAQNGR 399
Query: 597 TDVAEAMASQIFGLITETTGSYMLLS 622
++ A GL+ E S ML S
Sbjct: 400 SEEA-------LGLLQELHRSGMLPS 418
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 44/291 (15%)
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
+A I G EA EVF +M R ++I+W+++I A+ NG + A DL+
Sbjct: 38 SARIRDLGRLGRVGEAREVFD--------AMPRRDIIAWNSMISAYCHNGMPDAARDLYD 89
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL----VQNGLLNMY 457
+ + ++ +SG + L R G + R ++ N + VQNG + M
Sbjct: 90 AISGGNMRTGAILLSGYGRL---GRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMA 146
Query: 458 MK--------------------CGCLE--EGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
+ C L+ + +FE++ +++L++W MISGYG
Sbjct: 147 RRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHG 206
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN--EGRRIFDMMVREFRIEPQMEHYA 553
A F +M G PD F + LSA G ++ E R+ + + E +
Sbjct: 207 KAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLAL---KTGFERDVVIGT 263
Query: 554 CMVDLLGR-AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
++++ R +L A ++M +E N Y W T++ + D A A+
Sbjct: 264 AILNVYSRDTSVLDTAIKFFESM-IERNEYTWSTMIAALSHGGRIDAAIAV 313
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 365 bits (937), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 179/525 (34%), Positives = 304/525 (57%), Gaps = 13/525 (2%)
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN 236
LI A+ G++ D+ LF+++ +SWN + +G+ N + A ELF +M N
Sbjct: 328 LITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFR----N 383
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
++W +++ +A+ GR EE + L + + G+ ++ + C+++ A G +H
Sbjct: 384 TISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHS 443
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
+K G + F NALI +YGK +++ A+ +FS + K+IVSWN+ + + + L DE
Sbjct: 444 LAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDE 503
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
A F + D +SW+ +I A+A + EA+ F+ M + NS ++
Sbjct: 504 ARNTFDNMLSRDD--------VSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILT 555
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
LL VC A IG++IH +++ M+ ++V N L++MY KCGC + +F+ +E++
Sbjct: 556 ILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGC-ADSRRIFDLMEER 614
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D+ TWN++I+GY +GLG A+ ++ M AG P+ V FV +L+ACSHAGLV+EG + F
Sbjct: 615 DIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFF 674
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
M +++ + P EHYACMVDLLGR G +Q A + +MP+EP+ +W LL +C++HKN
Sbjct: 675 KSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKN 734
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
++ + A ++F + G+Y++LSNIY++ G W + A+VR K +G+ K G SW +
Sbjct: 735 AEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQ 794
Query: 657 VKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+K K+H F +G+ ++ + LEEL ++ G VPD + +L
Sbjct: 795 IKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATGYVPDTEFVL 839
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/580 (25%), Positives = 246/580 (42%), Gaps = 101/580 (17%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
++ H +L V+G +AR+ + R GR+ +AR VF+ P + + WNS++
Sbjct: 25 VRHAHGELEVSGC------SARIRDL-GRLGRVGEAREVFDAMP---RRDIIAWNSMISA 74
Query: 107 NVSNGLYENALKLYV-----KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH-N 160
NG+ + A LY MR +L G+ G+++
Sbjct: 75 YCHNGMPDAARDLYDAISGGNMRTGAILLSGYG------------------RLGRVLEAR 116
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
V + N N +I Y + G ++ + +LFD + ++ SWN M +G+ +
Sbjct: 117 RVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVD 176
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
A LF++M E N V+WT ++S + R + D+F M + G+ A LS
Sbjct: 177 ARNLFEKMP----ERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALS 232
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV-KVAQNLFSEIEEKNIV 339
L + + + +K GFE V + A++ VY + V A F + E+N
Sbjct: 233 AVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEY 292
Query: 340 SWN-------------------------------ALITSYAEAGLCDEAVEVFSQLEK-- 366
+W+ ALIT A+ G D+A +F Q+ +
Sbjct: 293 TWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPI 352
Query: 367 ------LDGGSMER---------------PNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
L G M+ N ISW+ +I +A NGR EEAL L +++
Sbjct: 353 VVSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHR 412
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
+ ++ + +++ + C+ AL G ++H V+V N N L+ MY KC +E
Sbjct: 413 SGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEY 472
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
VF ++ KD+++WNS ++ N L + A TF+ M+ D V++ ++SA +H
Sbjct: 473 ARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSR----DDVSWTTIISAYAH 528
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
A NE F M E ++ + + LLG G L
Sbjct: 529 AEQSNEAMGAFKTMF----CEHELPNSPILTILLGVCGSL 564
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 178/369 (48%), Gaps = 26/369 (7%)
Query: 38 LQQCKTIHQLKQVHNQL---IVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCK 94
L QC I + + Q+ IV NA +++ Y + G + +A+ +F+ PF
Sbjct: 332 LAQCGRIDDARILFEQIPEPIVVSWNA-------LITGYMQNGMVNEAKELFDKMPF--- 381
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
+++ W ++ NG E AL L ++ + G+L + + AC + +
Sbjct: 382 RNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALET---- 437
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G VH+ +++G Q N N LI MY K M + ++F ++ K+ +SWN +
Sbjct: 438 GTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQ 497
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
N D A F M L + V+WT+++S++A + E M F M +
Sbjct: 498 NDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPI 553
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ ++L VC L A +G+ IH IK G + + V NALI +Y K G ++ +F +E
Sbjct: 554 LTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-SRRIFDLME 612
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
E++I +WN +IT YA+ GL EA++++ +E G + PN +++ ++ A + G +
Sbjct: 613 ERDIFTWNTIITGYAQHGLGREAIKMYQHMES--AGVL--PNEVTFVGLLNACSHAGLVD 668
Query: 395 EALDLFRKM 403
E F+ M
Sbjct: 669 EGWKFFKSM 677
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 189/446 (42%), Gaps = 77/446 (17%)
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
++G++ ++ ++FD + ++ I+WN M S + N D A +L+ + N T
Sbjct: 45 GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAIS----GGNMRTGA 100
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
LLS + R GR+ E +FD M +R
Sbjct: 101 ILLSGYGRLGRVLEARRVFDGMLERN---------------------------------- 126
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
NA+I Y ++GD+ +A+ LF + +++ SWN+++T Y + +A +F
Sbjct: 127 -----TVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLF 181
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
+ M N++SW+ +I + +A D+F KM ++ + + LS
Sbjct: 182 EK--------MPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSA 233
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK-CGCLEEGHLVFEQIEKKDLIT 480
L++ + ++ +++++ +LN+Y + L+ FE + +++ T
Sbjct: 234 VKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYT 293
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV----AVLSACSHAGLVNEGRRIF 536
W++MI+ G + A+A +E D V + A+++ + G +++ R +F
Sbjct: 294 WSTMIAALSHGGRIDAAIAVYER--------DPVKSIACRTALITGLAQCGRIDDARILF 345
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
+ + EP + + ++ + G++ EA ++ MP N W ++ +
Sbjct: 346 EQIP-----EPIVVSWNALITGYMQNGMVNEAKELFDKMPFR-NTISWAGMIAGYAQNGR 399
Query: 597 TDVAEAMASQIFGLITETTGSYMLLS 622
++ A GL+ E S ML S
Sbjct: 400 SEEA-------LGLLQELHRSGMLPS 418
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 44/291 (15%)
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
+A I G EA EVF +M R ++I+W+++I A+ NG + A DL+
Sbjct: 38 SARIRDLGRLGRVGEAREVFD--------AMPRRDIIAWNSMISAYCHNGMPDAARDLYD 89
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL----VQNGLLNMY 457
+ + ++ +SG + L R G + R ++ N + VQNG + M
Sbjct: 90 AISGGNMRTGAILLSGYGRL---GRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMA 146
Query: 458 MK--------------------CGCLE--EGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
+ C L+ + +FE++ +++L++W MISGYG
Sbjct: 147 RRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHG 206
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN--EGRRIFDMMVREFRIEPQMEHYA 553
A F +M G PD F + LSA G ++ E R+ + + E +
Sbjct: 207 KAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLAL---KTGFERDVVIGT 263
Query: 554 CMVDLLGR-AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
++++ R +L A ++M +E N Y W T++ + D A A+
Sbjct: 264 AILNVYSRDTSVLDTAIKFFESM-IERNEYTWSTMIAALSHGGRIDAAIAV 313
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 365 bits (937), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 217/671 (32%), Positives = 359/671 (53%), Gaps = 41/671 (6%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVL-----------SIYARFGRLFDARNVFETAP 90
+T+ Q ++H L +G A +L ++ R+ A ++F+ P
Sbjct: 10 RTVRQAAELHAHLTTSGRLLHPPSAHHLLNSLVNCLPPSDPLHLRY-----ALHLFDRMP 64
Query: 91 FDCKSSSLLWNSILRV----NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+S+ L+++ LR S+G + L+ +MR+ V DGFTF + K
Sbjct: 65 ----ASTFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLF---KCSS 117
Query: 147 SFRFRFSFGQIVHNHVLQ-MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
S R R ++H L+ M + N LI MY ++G D + FD++ VK+ +SW
Sbjct: 118 SSRPRALLCTMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSW 177
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
M+ SG A G L + + + + ++WTSL+++++R R +E +D F M
Sbjct: 178 TMVISGLAKM----GMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLS 233
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
GI + VLS C+ L +G +H V + G + ALI +Y K GD
Sbjct: 234 EGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGH 293
Query: 326 AQNLFSEIEE-KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A+ +F + + SWNA+I Y + G D A +F Q+E D +I+++++I
Sbjct: 294 AREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRD--------IITFNSMI 345
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
+ +G+ EAL LF M+ + ++ T+ LLS CA AL GR +H + +
Sbjct: 346 TGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVE 405
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
+I + LL+MYMKCG + E +VF+++ K+D+ W +MI+G NG+G+ L F +M
Sbjct: 406 TDIYIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQM 465
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
GF+P+ V+++AVL+ACSH+ L+NEGR FD M + I PQ+EHY CM+DLLGR+GL
Sbjct: 466 RCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGL 525
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNI 624
L EA D+VK MPM+PN+ +W ++L++CR+HK D+A+ A + + + Y+ L NI
Sbjct: 526 LDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNI 585
Query: 625 YAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
S +WEDA+K+R+ + + +KK AG S + V ++H F + + + +LEE+
Sbjct: 586 CIDSRKWEDASKIRMLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLEEI 645
Query: 685 ALQMENKGCVP 695
+ ++++ G P
Sbjct: 646 SHRLKSAGYSP 656
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 149/629 (23%), Positives = 284/629 (45%), Gaps = 82/629 (13%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F +L C T L Q+H +++ G + F+ + +++ Y + ++F P
Sbjct: 800 FSTILGVCSTYEAL-QLHGRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPL-- 856
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
++ + N +LR + L E + ++ MR+ + +G ++ ++ C G +
Sbjct: 857 -QNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEW---LE 912
Query: 154 FGQIVHNHVLQMGF-QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H VL+ G+ N+ + N L+ +Y+ +G D+ K + + ++ ISWN + S +
Sbjct: 913 QGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMY 972
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
A A+ K+M G P+ ++ SLL+ + G +
Sbjct: 973 ADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQ------------------ 1014
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFS 331
+G IHG V K GF V V+ LI +YGK + +F+
Sbjct: 1015 -----------------LGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFN 1057
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
EI + N+LITS + D A+E+ + ++G + P+ +++SA + A
Sbjct: 1058 EIPSIALECCNSLITSSLRCNMFDAALEILHCM-IVEGVT---PDDVTFSATMKAI---- 1109
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
S++ S L+ C + +H +V++ ++ V +
Sbjct: 1110 --------------------SLSASPSLTSC---------QMLHSCLVKLGFEMDMAVCS 1140
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L+ Y G L HL+FE + ++I + ++IS G G A+ F++M+ +G KP
Sbjct: 1141 SLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKP 1200
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D V F+ ++ C AG+ EGR + ++M ++P H+ACMV+LL R G ++EA ++
Sbjct: 1201 DNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEM 1260
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
++ P+ W +LL SC+ H + + A+ + + + + + +SN + G
Sbjct: 1261 MEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDR 1320
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
E A +++ K +KK +G S IEV +
Sbjct: 1321 ETALRIKEMTNVKEVKK-SGHSLIEVSHR 1348
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 118/262 (45%), Gaps = 40/262 (15%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C + L+ +H+ + G + S L ++ +YA+ G AR VF+
Sbjct: 246 VLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGR 305
Query: 94 KSSSLLWNSIL-------RVNVSNGLYEN------------------------ALKLYVK 122
+ S WN+I+ V+V+ L++ AL L++
Sbjct: 306 RPQS--WNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMN 363
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
MR+ + D FT ++ AC +G+ G+ +H + + +++I L+ MY
Sbjct: 364 MRRHDLRVDNFTVVSLLSACASLGA----LPQGRALHACIELRLVETDIYIGTALLDMYM 419
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K G+++++ +F ++ ++ +W M +G A N LE F +M +G +PN V++ +
Sbjct: 420 KCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIA 479
Query: 243 LLSSHARCGRLEETMDLFDMMR 264
+L++ + L E FD MR
Sbjct: 480 VLTACSHSCLLNEGRLYFDEMR 501
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 156/375 (41%), Gaps = 52/375 (13%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTG-ANASAFLAARVLSIYARFGRLFDA 82
++Y ++ C+ Q + + Q +Q+H ++ G ++ FL+ ++ +Y+ G D
Sbjct: 895 LSYCYAMKGCY----QNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDT 950
Query: 83 RNVFETAPFDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
D S ++ WNSIL + G + A+ +M G + +F ++
Sbjct: 951 VKALN----DILSEDVISWNSILSMYADRGHMKEAVYYLKQMLWHGKMPSIRSFVSLLAL 1006
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQ-GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
G ++ IVH ++GF +VH+ LI MY K S +F+++
Sbjct: 1007 SGKTGDWQLGVQIHGIVH----KLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFNEIPSI 1062
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
N + + D ALE+ M +EG+ P+ VT+++ +
Sbjct: 1063 ALECCNSLITSSLRCNMFDAALEILHCMIVEGVTPDDVTFSATMK--------------- 1107
Query: 261 DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
A+ LS L + M +H ++K GFE + V ++LI Y
Sbjct: 1108 ---------------AISLSASPSLTSCQM---LHSCLVKLGFEMDMAVCSSLITAYACA 1149
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
G + + +F + + N++ + A+I++ A G A+E+F Q+ S +P+ +++
Sbjct: 1150 GQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMV----SSGLKPDNVTF 1205
Query: 381 SAVIGAFASNGRGEE 395
I G EE
Sbjct: 1206 LCAIAGCDQAGMFEE 1220
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 100/222 (45%), Gaps = 10/222 (4%)
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
+M +V S + +I F +G + A ++R M + + T S +L VC+ AL
Sbjct: 756 TMAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEAL-- 813
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
++HG V+ + + N V + L+N YM +F ++ ++ N ++ G G
Sbjct: 814 --QLHGRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNTAMCNVVLRGLGN 871
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG-LVNEGRRIFDMMVREFRIEPQM 549
L E + F +M + +G+++ + C G + +GR++ ++++ I +
Sbjct: 872 LKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNI 931
Query: 550 EHYACMVDLLGRAGLLQEASDIVK--NMPMEPNAYVWGTLLN 589
+VDL G ++ D VK N + + W ++L+
Sbjct: 932 FLSNSLVDLYSAIG---DSVDTVKALNDILSEDVISWNSILS 970
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 217/660 (32%), Positives = 357/660 (54%), Gaps = 22/660 (3%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNV-FETAPFD-CKSSSLL 99
+++ Q ++H L+ +G A+ +L+ D ++ + FD S+ L
Sbjct: 10 RSVRQAAELHAVLVASGRLLHPPSASHLLNSLVNCFTPTDPLHLRYALCLFDRMPCSTFL 69
Query: 100 WNSILRV--NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
+++ LR S+G E+ L LY +MR+ GV D FTF + + C R Q+
Sbjct: 70 FDTALRACFRASSG-PESPLILYRRMRRTGVCTDAFTFHFLFKCC---ARGRAHVLLCQM 125
Query: 158 VHNHVLQMGFQGNVHIV-NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H + V +V N +I MY ++G D+ + FD + VK+ ++W + SG A
Sbjct: 126 LHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLG 185
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
D A L + N ++WT L+S ++R GR E +D F+ M GIE +
Sbjct: 186 LLDDAWCLLRHSPAR----NVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVI 241
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE- 335
+LS CA L G+ +H V + G + ALI +Y K GD+ A +F +
Sbjct: 242 GLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALGRG 301
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
+ SWNA+I Y + G D A +F Q+E D +++++++I + GR E
Sbjct: 302 RRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRD--------LVTFNSLITGYIHGGRLRE 353
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
AL LF +M+ + A++ T+ LL+ CA AL GR +H + + + +I + LL+
Sbjct: 354 ALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLD 413
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY+KCG +EE LVF+ + +D+ TW++MI+G NG+G+ AL F M GF+P+ V
Sbjct: 414 MYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVT 473
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
++A+L+ACSH+ L++EGR F+ M I P +EHY CM+DLLGR+GLL EA D+V+ M
Sbjct: 474 YIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTM 533
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
PM+PNA +W ++L++CR+HK+ ++A A + L + Y+ L NIY S +WEDA+
Sbjct: 534 PMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDAS 593
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
++R + +G+KK AG S I V ++H F + + + ++EE+ ++++ G P
Sbjct: 594 QIRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSP 653
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 209/644 (32%), Positives = 355/644 (55%), Gaps = 51/644 (7%)
Query: 52 NQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNG 111
++L V + F +L+ Y + + A +F++ P + + WN ++ +G
Sbjct: 213 SRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMP---ERDVVSWNMMVSALSQSG 269
Query: 112 LYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNV 171
AL + V M+ GV D T+ + AC + S R+ G+ +H V++ +
Sbjct: 270 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRW----GKQLHAQVIRNLPHIDP 325
Query: 172 HIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELE 231
++ + L+ +YAK G ++ +F+ +
Sbjct: 326 YVASALVELYAKSGCFKEAKGVFNSLH--------------------------------- 352
Query: 232 GLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMG 291
+ N V WT L+S + G E+++LF+ MR + + A+A ++S C +G
Sbjct: 353 --DRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLG 410
Query: 292 KVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEA 351
+ +H +K G V V N+LI +Y K +++ A+ +F + EK+IVSW ++IT+Y++
Sbjct: 411 RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQV 470
Query: 352 GLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV-A 410
G +A E F DG M NVI+W+A++GA+ +G E+ L +++ M + V
Sbjct: 471 GNVAKAREFF------DG--MSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRP 522
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
+ VT L CA+ A +G +I G V+V + + V N ++ MY KCG + E VF
Sbjct: 523 DWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVF 582
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
+ + KD+++WN+MI+GY +G+G+ A+ F+++++ G KPD +++VAVLS CSH+GLV
Sbjct: 583 DFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQ 642
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
EG+ FDMM R I P +EH++CMVDLLGRAG L EA D++ +MPM+P A VWG LL++
Sbjct: 643 EGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSA 702
Query: 591 CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVA 650
C++H N ++AE A +F L + +GSYML++ IYA +G+ +D+A++R + KG+KK
Sbjct: 703 CKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNP 762
Query: 651 GQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
G SW+EV K+H+F + + + + + L+EL ++ G V
Sbjct: 763 GYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYV 806
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 227/488 (46%), Gaps = 55/488 (11%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG- 127
+L+ YA+ GRL DA +F P +S WN+++ + Y +L+ ++ M + G
Sbjct: 97 MLNGYAKLGRLSDAVELFGRMPARDVAS---WNTLMSGYFQSRQYLVSLETFLSMHRSGD 153
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
+ FT +++C +G +V + Q + + L+ M+ + G +
Sbjct: 154 SWPNAFTLACAMKSCGALGWHSLALQLLAMVQ----KFDSQDDSEVAAALVDMFVRCGAV 209
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
+ +LF +++ N M +G+ + D ALELF M E + V+W ++S+
Sbjct: 210 DLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMP----ERDVVSWNMMVSAL 265
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
++ GR+ E +D+ M+ +G+ + + L+ CA L++ GK +H VI+
Sbjct: 266 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 325
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
+V +AL+ +Y K G K A+ +F+ + ++N V+W LI+ + + G E+VE+F+Q+
Sbjct: 326 YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQM--- 382
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
R +++ LD F ++ L+S C
Sbjct: 383 ------RAELMT-----------------LDQF-------------ALATLISGCCSRMD 406
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L +GR++H ++ + ++V N L++MY KC L+ +F + +KD+++W SMI+
Sbjct: 407 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITA 466
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
Y G A F+ M E + + A+L A G +G R++ +M+ E + P
Sbjct: 467 YSQVGNVAKAREFFDGMSEKNV----ITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRP 522
Query: 548 QMEHYACM 555
Y +
Sbjct: 523 DWVTYVTL 530
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 203/434 (46%), Gaps = 16/434 (3%)
Query: 159 HNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF-DKVRVKNYISWNMMFSGFALNFD 217
H ++ +G V + N L+ Y G +SD+ +L + N I+ N+M +G+A
Sbjct: 47 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 106
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE-VGAEAIA 276
A+ELF RM + +W +L+S + + + +++ F M + G A +A
Sbjct: 107 LSDAVELFGRMPAR----DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLA 162
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
+ C L + + V K +D V AL+ ++ + G V +A LF I+E
Sbjct: 163 CAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEP 222
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
+ N+++ Y + D A+E+F SM +V+SW+ ++ A + +GR EA
Sbjct: 223 TMFCRNSMLAGYVKTYGVDHALELFD--------SMPERDVVSWNMMVSALSQSGRVREA 274
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
LD+ MQ V +S T + L+ CA ++L G+++H V+R + + V + L+ +
Sbjct: 275 LDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVEL 334
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y K GC +E VF + ++ + W +ISG+ G ++ F +M D A
Sbjct: 335 YAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFAL 394
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
++S C + GR++ + ++ +I+ + + ++ + + LQ A I + M
Sbjct: 395 ATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNS-LISMYAKCDNLQSAEAIFRFMN 453
Query: 577 MEPNAYVWGTLLNS 590
E + W +++ +
Sbjct: 454 -EKDIVSWTSMITA 466
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 186/383 (48%), Gaps = 21/383 (5%)
Query: 25 TYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
TY +SL C + ++ KQ+H Q+I + ++A+ ++ +YA+ G +A+
Sbjct: 292 TYTSSLTAC-----ARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKG 346
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
VF + +++ W ++ + G + +++L+ +MR + D F +I C
Sbjct: 347 VFNSLH---DRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC-- 401
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
R G+ +H+ L+ G V + N LI MYAK + + +F + K+ +S
Sbjct: 402 --CSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVS 459
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MM 263
W M + ++ + A E F M E N +TW ++L ++ + G E+ + ++ M+
Sbjct: 460 WTSMITAYSQVGNVAKAREFFDGMS----EKNVITWNAMLGAYIQHGAEEDGLRMYKVML 515
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
+ + + CADL A+ +G I G +K G V NA+I +Y K G +
Sbjct: 516 SEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRI 575
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
A+ +F + K+IVSWNA+IT Y++ G+ +A+E+F + K +P+ IS+ AV
Sbjct: 576 LEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGA----KPDYISYVAV 631
Query: 384 IGAFASNGRGEEALDLFRKMQLA 406
+ + +G +E F M+ A
Sbjct: 632 LSGCSHSGLVQEGKFYFDMMKRA 654
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 155/352 (44%), Gaps = 47/352 (13%)
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN-LFS 331
+A A L C A + +HG ++ G VF++N L+ Y G + A+ L
Sbjct: 25 QAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLM 84
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+I N+++ N ++ YA+ G +AVE+F G M +V SW+ ++ + +
Sbjct: 85 DIAHPNVITHNVMLNGYAKLGRLSDAVELF--------GRMPARDVASWNTLMSGYFQSR 136
Query: 392 RGEEALDLFRKMQLA-KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
+ +L+ F M + N+ T++ + C ++ ++ V + + V
Sbjct: 137 QYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVA 196
Query: 451 NGLLNMYMKCGCLE---------------------EGHL----------VFEQIEKKDLI 479
L++M+++CG ++ G++ +F+ + ++D++
Sbjct: 197 AALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVV 256
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN M+S +G AL +M G + D + + L+AC+ + G+++ +
Sbjct: 257 SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 316
Query: 540 VREFRIEPQMEHY--ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+R P ++ Y + +V+L ++G +EA + ++ + N W L++
Sbjct: 317 IRNL---PHIDPYVASALVELYAKSGCFKEAKGVFNSLH-DRNNVAWTVLIS 364
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 105/247 (42%), Gaps = 40/247 (16%)
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEE---------------------------GH 467
HG +V V + + +QN LL+ Y+ CG L + G
Sbjct: 47 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 106
Query: 468 L-----VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK-PDGVAFVAVLS 521
L +F ++ +D+ +WN+++SGY + +L TF M +G P+ +
Sbjct: 107 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 166
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
+C G + ++ MV++F + E A +VD+ R G + AS + + EP
Sbjct: 167 SCGALGWHSLALQLL-AMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIK-EPTM 224
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLITE-TTGSYMLLSNIYAASGRWEDAAKVRIS 640
+ ++L D A ++F + E S+ ++ + + SGR +A + +
Sbjct: 225 FCRNSMLAGYVKTYGVD----HALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVD 280
Query: 641 AKTKGLK 647
++KG++
Sbjct: 281 MQSKGVR 287
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 365 bits (936), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 215/674 (31%), Positives = 362/674 (53%), Gaps = 53/674 (7%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F LL C I L QVH ++ G F++ ++ YA G++ R +F+
Sbjct: 133 FPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGM- 191
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + W S++ L + A+ L+ +M + GV + T VI AC +
Sbjct: 192 --LERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLEL 249
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ V +++ ++G + + +VN L+ MY K G + + ++FD+ KN + +N + S
Sbjct: 250 ----GKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMS 305
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
+ + L + M +G P+ VT +LS+ A C +L
Sbjct: 306 NYVHHEWASDVLVILDEMLQKGPRPDKVT---MLSTIAACAQL----------------- 345
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
DL+ +GK H +V++ G E + + NA+I +Y K G + A +F
Sbjct: 346 ------------GDLS---VGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVF 390
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+ K +V+WN+LI G + A +F ++ +ER +++SW+ +IGA
Sbjct: 391 EHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEM-------LER-DLVSWNTMIGALVQV 442
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
EEA++LFR+MQ + + VT+ G+ S C AL++ + + ++ + ++ ++ +
Sbjct: 443 SMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLG 502
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
L++M+ +CG VF+++EK+D+ W + I M G E A+ F EM+E K
Sbjct: 503 TALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVK 562
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
PD V FVA+L+ACSH G V++GR++F M + I P + HY CMVDLLGRAGLL+EA D
Sbjct: 563 PDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVD 622
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
++++MP+EPN VWG+LL +CR HKN ++A A ++ L E G ++LLSNIYA++G+
Sbjct: 623 LIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGK 682
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
W D A+VR+ K KG++KV G S IEV+ IH F+SG+ ++ ++ +LEE+ ++
Sbjct: 683 WTDVARVRLQMKEKGVQKVPGSSSIEVQGLIHEFTSGDESHAENTHIGLMLEEINCRLSE 742
Query: 691 KGCVPDNDIILWEM 704
G VPD +L ++
Sbjct: 743 AGYVPDTTNVLLDV 756
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 164/636 (25%), Positives = 271/636 (42%), Gaps = 134/636 (21%)
Query: 4 SLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTG----- 58
S L P +NP IT N+S LL CKT+ +LKQ+H ++ G
Sbjct: 9 STLLVPASLKEANP------ITRNSS-----SKLLVNCKTLKELKQLHCDMMKKGLLCHK 57
Query: 59 --ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSL-LWNSILRVNVSNGLYEN 115
+N + +A+ V L ARN F D +SL ++N ++R S GL +
Sbjct: 58 PASNLNKLIASSVQ--IGTLESLDYARNAF--GDDDGNMASLFMYNCLIRGYASAGLGDQ 113
Query: 116 ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVN 175
A+ LYV+M +G++ D +TFP ++ AC S S G VH VL+MG +G++ + N
Sbjct: 114 AILLYVQMLVMGIVPDKYTFPFLLSAC----SKILALSEGVQVHGAVLKMGLEGDIFVSN 169
Query: 176 ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
LI YA+ G++ KLFD + +N +SW + +G++ A+ LF +M G+EP
Sbjct: 170 SLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEP 229
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
N VT + V+S CA L +GK +
Sbjct: 230 NPVT-----------------------------------MVCVISACAKLKDLELGKKVC 254
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
++ + G E + NAL+ +Y K GD+ A+ +F E KN+V +N ++++Y
Sbjct: 255 SYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWAS 314
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
+ + + ++ L G RP + VT+
Sbjct: 315 DVLVILDEM--LQKGP--RP-----------------------------------DKVTM 335
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
++ CA+ L++G+ H +V+R + + N +++MYMKCG E VFE +
Sbjct: 336 LSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPN 395
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIE----------------------------- 506
K ++TWNS+I+G +G E A F+EM+E
Sbjct: 396 KTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREM 455
Query: 507 --AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
G D V V + SAC + G ++ + + + + I ++ +VD+ R G
Sbjct: 456 QNQGIPGDRVTMVGIASACGYLGALDLAKWVC-TYIEKNDIHVDLQLGTALVDMFSRCGD 514
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
A + K M + + W + M NT+ A
Sbjct: 515 PSSAMHVFKRME-KRDVSAWTAAIGVMAMEGNTEGA 549
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 365 bits (936), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 208/623 (33%), Positives = 332/623 (53%), Gaps = 90/623 (14%)
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K+S WNSI+ +G AL + MRKL + + TFP I++C S +
Sbjct: 48 KTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSC----SSLYDLC 103
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H G+ ++ + + LI MY+K G ++D+ KLFD++
Sbjct: 104 AGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIP--------------- 148
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-----------DM 262
E N V+WTS++S + + R E + LF D
Sbjct: 149 --------------------ERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDE 188
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
+ G+ V + + V+S CA + + + +HG +K GFE + V N L+ Y K G+
Sbjct: 189 IVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGE 248
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
+ V++ +F DG ME +V SW++
Sbjct: 249 ISVSRKVF-------------------------------------DG--MEETDVCSWNS 269
Query: 383 VIGAFASNGRGEEALDLFRKM-QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
+I +A NG EA LF M + +V N+VT+S +L CA S AL IG+ IH VV++
Sbjct: 270 LIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKM 329
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
+ N++V +++MY KCG +E F+++++K++ +W M++GYGM+G G+ A+ F
Sbjct: 330 ELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVF 389
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
EMI G KP+ + FV+VL+ACSHAGL+ EG F+ M EF +EP +EHY+CMVDLLGR
Sbjct: 390 YEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGR 449
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLL 621
AG L+EA +++ M ++P+ VWG+LL +CR+HKN ++ E A ++F L G Y+LL
Sbjct: 450 AGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLL 509
Query: 622 SNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVL 681
SNIYA +GRW+D ++RI K GL K G S +E K ++H+F G+ + + E L
Sbjct: 510 SNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYL 569
Query: 682 EELALQMENKGCVPDNDIILWEM 704
+EL ++++ G +P+ +L+++
Sbjct: 570 DELNVKLQEVGYMPNVTSVLYDV 592
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 180/393 (45%), Gaps = 64/393 (16%)
Query: 27 NNSLLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
N S C ++ C +++ L KQ+H Q V G + F+A+ ++ +Y++ G L DAR
Sbjct: 85 NRSTFPC---TIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDAR 141
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKL-----------YVKMRKLGVLGDG 132
+F+ P + + + W S++ V N A+ L Y ++ +GV D
Sbjct: 142 KLFDEIP---ERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDS 198
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
VI AC + S + VH ++ GF+G + + N L+ YAK G++S S K
Sbjct: 199 VLLGCVISACARVCV----KSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRK 254
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+FD + + SWN SL++ +A+ G
Sbjct: 255 VFDGMEETDVCSWN-----------------------------------SLIAVYAQNGL 279
Query: 253 LEETMDLFDMMRKRG-IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
E LF M KRG + A ++ VL CA A +GK IH V+K ED + V
Sbjct: 280 SVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGT 339
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
+++ +Y K G V++A+ F ++ KN+ SW ++ Y G EA++VF ++ +
Sbjct: 340 SIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCG--- 396
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+PN I++ +V+ A + G +E F KM+
Sbjct: 397 -IKPNYITFVSVLAACSHAGLLKEGWHWFNKMK 428
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 154/313 (49%), Gaps = 17/313 (5%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH + G + ++ YA+ G + +R VF+ ++ WNS++ V
Sbjct: 220 VHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME---ETDVCSWNSLIAVYAQ 276
Query: 110 NGLYENALKLYVKMRKLG-VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
NGL A L+ M K G V + T V+ AC G+ + G+ +H+ V++M +
Sbjct: 277 NGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQI----GKCIHDQVVKMELE 332
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
N+ + ++ MY K G++ + K FD+++ KN SW +M +G+ ++ A+++F M
Sbjct: 333 DNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEM 392
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGIEVGAEAIAVVLSVCADLAA 287
G++PN++T+ S+L++ + G L+E F+ M+ + +E G E + ++ + L
Sbjct: 393 IRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDL---LGR 449
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV----AQNLFSEIEEKNIVSWNA 343
K +G + + + V +L+ H +V++ A+ LF +++ N +
Sbjct: 450 AGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLF-KLDPSNCGYYVL 508
Query: 344 LITSYAEAGLCDE 356
L YA+AG D+
Sbjct: 509 LSNIYADAGRWDD 521
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 141/339 (41%), Gaps = 60/339 (17%)
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
+ L + G +++ +V SW+++I FA +G +AL F M+ + N T +
Sbjct: 36 ANLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKS 95
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
C+ L G++IH +I V + L++MY KCG L + +F++I ++++++W
Sbjct: 96 CSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSW 155
Query: 482 NSMISGYGMNGLGENALATFEEMI---EAGFKP--------DGVAFVAVLSACSH----- 525
SMISGY N A+ F+E + E + D V V+SAC+
Sbjct: 156 TSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKS 215
Query: 526 ------------------------------AGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
G ++ R++FD M E + + +
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGME-----ETDVCSWNSL 270
Query: 556 VDLLGRAGLLQEA----SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
+ + + GL EA SD+VK + NA +L +C + + + Q+ +
Sbjct: 271 IAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKME 330
Query: 612 TE---TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
E G+ ++ ++Y GR E A K K K +K
Sbjct: 331 LEDNLVVGTSIV--DMYCKCGRVEMARKAFDRLKRKNVK 367
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 365 bits (936), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 218/654 (33%), Positives = 347/654 (53%), Gaps = 92/654 (14%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVL-SIYARFGRLFDARNVFETAPFDCKS 95
LLQ KT Q+ Q+H QLI T + F A+R+L S+ ++ + A VF +
Sbjct: 17 LLQXSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIH---QP 73
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+S + N++++ + E AL+ Y +MRK G+LGD +T+P V++AC M G
Sbjct: 74 NSFICNTMVKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLE----G 129
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+V ++ GF G+V +VN LI MY + G+ + +FD GF+
Sbjct: 130 GLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFD---------------GFS-- 172
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
E + V+W S+L + CG +E ++FD M +R +
Sbjct: 173 ------------------EKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDV------- 207
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
V + D GK K G+V A+ F +
Sbjct: 208 -----VSWSIMIDGYGK--------------------------KMGEVNRARVFFDSMPT 236
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
+++VSWN++I YA+ G + A E+F + M + NVISWS +I +A + +E
Sbjct: 237 RDLVSWNSMIDGYAKVGEMEVAREIFBK--------MLQKNVISWSIMIDGYAXHRDSKE 288
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
AL+LFR+M + + V++ G +S C++ AL+ GR IH ++ R M +I+VQ L++
Sbjct: 289 ALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVD 348
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY+KCG +E +F + ++++++WN MI G GMNG G+ AL F +M D +
Sbjct: 349 MYLKCGSXDEARXIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLL 408
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
F+ VL ACSHA LV EG IF+ M +R+EP++EHY C+VDLLGRAG L + +I+++M
Sbjct: 409 FLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSM 468
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
PM+PNA +WG+LL +CR+H+N +AE + ++ L + +G Y+L+SNIYA G WE
Sbjct: 469 PMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGML 528
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS---LQSDLKNVCEVLEELAL 686
++R K + +KK G+S IEV + F SG L+ +++ V L ++A+
Sbjct: 529 RIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSHILREEIELVIWSLAKMAM 582
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 365 bits (936), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 216/678 (31%), Positives = 355/678 (52%), Gaps = 48/678 (7%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM--RKLGVLGD 131
AR G + AR FE P +S +N++L N L + AL L+ +M R L
Sbjct: 28 ARAGNIEGARAAFEAMPLRTTAS---YNALLAGYFRNRLPDAALGLFRRMPSRDLASYN- 83
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
+ R + + F +V L+ Y + G ++D+
Sbjct: 84 -----------ALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAI 132
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
+LF ++ +N++S+ ++ G + A LF M + + V WT++LS + + G
Sbjct: 133 RLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP----DRDVVAWTAMLSGYCQAG 188
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
R+ E LFD M KR + + ++S A ++ + + + + +
Sbjct: 189 RITEARALFDEMPKRNVV----SWTAMISGYAQNGEVNLARKLFEVMPERNEVSW----T 240
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
A++ Y + G V+ A LF+ + E + + NA++ + + G+ D A VF ++ + D G+
Sbjct: 241 AMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGT 300
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
WSA+I A+ N EAL FR+M V N ++ +L+VCA A L+ G
Sbjct: 301 --------WSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYG 352
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
RE+H ++R S + ++ + L+ MY+KCG L++ VF E KD++ WNSMI+GY +
Sbjct: 353 REVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQH 412
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
GLGE AL F +M AG PDG+ ++ L+ACS+ G V EGR IF+ M I P EH
Sbjct: 413 GLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEH 472
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
Y+CMVDLLGR+GL++EA D++KNMP+EP+A +WG L+ +CRMH+N ++AE A ++ L
Sbjct: 473 YSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELE 532
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSL- 670
G Y+LLS+IY + GRWEDA+K+R ++ L K G SWIE +++H+F+SG+ L
Sbjct: 533 PGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLA 592
Query: 671 QSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHRIVGF 730
+ + +LE+L + G D +L ++ Q+ + S+ + V +
Sbjct: 593 HPEHAAILRILEKLDGLLMESGYSADGSFVL------HDIDEEQKSHSLRYHSERQAVAY 646
Query: 731 RNLK----LGLRLLLSLR 744
LK + +R++ +LR
Sbjct: 647 GLLKIPEGMPIRVMKNLR 664
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 156/337 (46%), Gaps = 54/337 (16%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS Y + GR+ +AR +F+ P K + + W +++ NG A KL+ M +
Sbjct: 180 MLSGYCQAGRITEARALFDEMP---KRNVVSWTAMISGYAQNGEVNLARKLFEVMPE--- 233
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ V L+G Y + G +
Sbjct: 234 ---------------------------------------RNEVSWTAMLVG-YIQAGHVE 253
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
D+ +LF+ + + N M GF D A +F++M E + TW++++ ++
Sbjct: 254 DAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMR----ERDDGTWSAMIKAYE 309
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ L E + F M RG+ ++ +L+VCA LA G+ +H +++ F+ VF
Sbjct: 310 QNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVF 369
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
+ALI +Y K G++ A+ +F E K+IV WN++IT YA+ GL ++A+ +F + +L
Sbjct: 370 AVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDM-RLA 428
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
G S P+ I++ + A + G+ +E ++F M +
Sbjct: 429 GMS---PDGITYIGALTACSYTGKVKEGREIFNSMTV 462
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 118/267 (44%), Gaps = 46/267 (17%)
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
NA I A AG + A F +M S++A++ + N + AL LFR
Sbjct: 21 NARIAHLARAGNIEGARAAFE--------AMPLRTTASYNALLAGYFRNRLPDAALGLFR 72
Query: 402 KMQLAKVVANSVTISG--------------LLSVCAESAALNIGREIHGHV--------V 439
+M + + + ISG L S+ + ++ + G+V +
Sbjct: 73 RMPSRDLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAI 132
Query: 440 RVSMN---KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
R+ +N + LL + G + E +F+++ +D++ W +M+SGY G
Sbjct: 133 RLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITE 192
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
A A F+EM K + V++ A++S + G VN R++F++M P+ +
Sbjct: 193 ARALFDEMP----KRNVVSWTAMISGYAQNGEVNLARKLFEVM-------PERNEVSWTA 241
Query: 557 DLLG--RAGLLQEASDIVKNMPMEPNA 581
L+G +AG +++A+++ MP P A
Sbjct: 242 MLVGYIQAGHVEDAAELFNAMPEHPVA 268
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 12/224 (5%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
++VH ++ + F + ++++Y + G L A+ VF T F+ K ++WNS++
Sbjct: 353 REVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHT--FEPKDI-VMWNSMITGY 409
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR-FRFSFGQIVHNHVLQMG 166
+GL E AL ++ MR G+ DG T+ + AC + G + R F + N ++ G
Sbjct: 410 AQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPG 469
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELF 225
+ +V+ L+G + G + ++F L + V+ + + W + ++ + + A E+
Sbjct: 470 AEHYSCMVD-LLG---RSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA-EVA 524
Query: 226 KRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGI 268
+ LE LEP LLS + GR E+ + + R +
Sbjct: 525 AKKLLE-LEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNL 567
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 364 bits (935), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 217/668 (32%), Positives = 361/668 (54%), Gaps = 65/668 (9%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLS---IYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
L+ +H Q+I TG + + + ++++ + F L A +VFET + + L+WN++
Sbjct: 3 LRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQ---EPNLLIWNTM 59
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
R + + +AL LYV M LG+L + +TFP ++++C +FR GQ +H HVL
Sbjct: 60 FRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFRE----GQQIHGHVL 115
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
++G+ ++++ LI MY + G++ D+ K+FD+ ++ +S+ + +G+A A +
Sbjct: 116 KLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQK 175
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
+F + ++ + V+W +++S +A G +E ++LF M K + + V+S CA
Sbjct: 176 MFDEIPIK----DVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACA 231
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
A+ +G+ +H ++ GF + + NALI +Y K G+V
Sbjct: 232 QSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEV-------------------- 271
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+ A +F L D VISW+ +IG + +EAL LF++M
Sbjct: 272 -----------ETACGLFEGLSYKD--------VISWNTLIGGYTHMNLYKEALLLFQEM 312
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL-VQNG------LLNM 456
+ N VT+ +L CA A+ IGR IH V +NK + V N L++M
Sbjct: 313 LRSGESPNDVTMLSILPACAHLGAIEIGRWIH-----VYINKRLKGVANASSHRTSLIDM 367
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCG +E VF+ I + L +WN+MI G+ M+G A F M + +PD + F
Sbjct: 368 YAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITF 427
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
V +LSACSH+G+++ GR IF M +++I P++EHY CM+DLLG +GL +EA +++ M
Sbjct: 428 VGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTME 487
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAK 636
MEP+ +W +LL +C+MH N ++ E+ A + + + GSY+LLSNIYA +GRW + AK
Sbjct: 488 MEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAK 547
Query: 637 VRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
+R KG+KKV G S IE+ +H F G+ + + +LEE+ + +E G VPD
Sbjct: 548 IRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPD 607
Query: 697 NDIILWEM 704
+L EM
Sbjct: 608 TSEVLQEM 615
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 158/347 (45%), Gaps = 20/347 (5%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
Q +I +QVH+ + G ++ + ++ +Y + G + A +FE + +
Sbjct: 232 QSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSY---KDVIS 288
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN+++ LY+ AL L+ +M + G + T ++ AC +G+ G+ +H
Sbjct: 289 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEI----GRWIH 344
Query: 160 NHVLQ--MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
++ + G LI MYAK G + + ++FD + ++ SWN M GFA++
Sbjct: 345 VYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGR 404
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK-RGIEVGAEAIA 276
+ A ++F RM +EP+ +T+ LLS+ + G L+ +F M++ I E
Sbjct: 405 ANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYG 464
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV----AQNLFSE 332
++ + L + K + E + +L+ HG+V++ AQNL +
Sbjct: 465 CMIDL---LGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLI-K 520
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
IE KN S+ L YA AG +E ++ + L D G + P S
Sbjct: 521 IEPKNPGSYVLLSNIYATAGRWNEVAKIRALLN--DKGMKKVPGCSS 565
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 238/752 (31%), Positives = 393/752 (52%), Gaps = 71/752 (9%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
AR G + AR FE P +S +N++L N L + AL+++ +M
Sbjct: 28 ARTGNMEGARATFEAMPLRTTAS---YNALLAGYFRNHLPDAALRVFHRM---------- 74
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ--------MGFQGNVHIVNELIGMYAKMG 185
+ + S+ S G + H L + + +V L+ Y + G
Sbjct: 75 -------PTRDLASYNALIS-GLSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHG 126
Query: 186 QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
++D+ +LF ++ +N+IS+ ++ GF D A +LF M + + V WT++LS
Sbjct: 127 LLADAIQLFRQMPERNHISYTVLLGGFLDAGRVDEARKLFDEMPAK----DVVAWTAMLS 182
Query: 246 SHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
+ + GR++E LFD M KR + A+V + + K+ E
Sbjct: 183 GYCQVGRVDEARTLFDEMPKRNV---VSWTAMVSGYAQNGQVNLARKLFEVMP-----ER 234
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
A++ Y + G ++ A+ LF+ + + + + N +I + + G+ D A VF ++
Sbjct: 235 NEVSWTAMLFGYIQAGRIEDAEELFNAMPDHPLAACNGMIVGFGQQGMVDAAKSVFDRMC 294
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
+ D G+ WSA+I A+ N EAL FR+M + N ++ +L+VCA
Sbjct: 295 ERDDGT--------WSAIIKAYEQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCAAL 346
Query: 426 AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMI 485
A L+ GRE+HG ++R S + +I + L+ MY+KCG L++ VF E KD++ WNSMI
Sbjct: 347 AVLDYGREVHGAMLRRSFDMDIYAVSALITMYIKCGNLDKAKRVFHMFEPKDVVMWNSMI 406
Query: 486 SGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRI 545
+GY +GLGE AL F++M AG PDG+ ++ L+ACS+ G V EGR IF+ M + I
Sbjct: 407 TGYAQHGLGEEALHIFDDMRLAGMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGI 466
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMAS 605
+P +EHYACMVDLLGRAGL+ EA ++K MP+EP+A +WG L+ +CRMHKN ++AE A
Sbjct: 467 KPGLEHYACMVDLLGRAGLVDEALYLIKTMPVEPDAVIWGALMGACRMHKNAEIAEISAK 526
Query: 606 QIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFS 665
++ L G Y+LLS+IY +SGRWEDA+ +R ++ L K G SWIE +++H+F
Sbjct: 527 KLLELEPGNAGPYVLLSHIYTSSGRWEDASNMRKFISSRHLNKSLGCSWIEYDKRVHLFK 586
Query: 666 SGNSL-QSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSK 724
SG+ L + ++ ++LE+L + G D +L ++ Q+ + S+
Sbjct: 587 SGDVLAHQEHASILKMLEKLDGLLMESGYSADGSFVL------HDIDDEQKTHSLRYHSE 640
Query: 725 HRIVGFRNLK----LGLRLLLSLR--STNGQL--MKNKLKLGLVVFNLSLK-----LFND 771
+ V + LK L +R++ +LR T G++ + N L + + +LS + LF++
Sbjct: 641 RQAVAYGLLKIPEELPIRVMKNLRVCGTIGEVNAVVNSLLHIISLMSLSFEKGLNSLFSN 700
Query: 772 AVTATNRVISSDIRLENDSPHGLV--LLRGLK 801
+ R + I E++ G + LL G+K
Sbjct: 701 ILIYYRRHMEDYISAEDEVATGKIRQLLAGIK 732
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 145/322 (45%), Gaps = 49/322 (15%)
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD-- 368
NA I + G+++ A+ F + + S+NAL+ Y L D A+ VF ++ D
Sbjct: 21 NARIARLARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRVFHRMPTRDLA 80
Query: 369 -------GGSMER----------------PNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
G S+ R P+V+S+++++ + +G +A+ LFR+M
Sbjct: 81 SYNALISGLSLRRHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQLFRQMPE 140
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
++ +V + G L A + E+ K+++ +L+ Y + G ++E
Sbjct: 141 RNHISYTVLLGGFLDAGRVDEARKLFDEMPA--------KDVVAWTAMLSGYCQVGRVDE 192
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
+F+++ K+++++W +M+SGY NG A FE M E + V++ A+L
Sbjct: 193 ARTLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVMPER----NEVSWTAMLFGYIQ 248
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYAC--MVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
AG + + +F+ M P AC M+ G+ G++ A + M E +
Sbjct: 249 AGRIEDAEELFNAM-------PDHPLAACNGMIVGFGQQGMVDAAKSVFDRM-CERDDGT 300
Query: 584 WGTLLNSCRMHKNTDVAEAMAS 605
W ++ + +N + EA+++
Sbjct: 301 WSAIIKA--YEQNEFLMEALST 320
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 209/644 (32%), Positives = 355/644 (55%), Gaps = 51/644 (7%)
Query: 52 NQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNG 111
++L V + F +L+ Y + + A +F++ P + + WN ++ +G
Sbjct: 193 SRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMP---ERDVVSWNMMVSALSQSG 249
Query: 112 LYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNV 171
AL + V M+ GV D T+ + AC + S R+ G+ +H V++ +
Sbjct: 250 RVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRW----GKQLHAQVIRNLPHIDP 305
Query: 172 HIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELE 231
++ + L+ +YAK G ++ +F+ +
Sbjct: 306 YVASALVELYAKSGCFKEAKGVFNSLH--------------------------------- 332
Query: 232 GLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMG 291
+ N V WT L+S + G E+++LF+ MR + + A+A ++S C +G
Sbjct: 333 --DRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLG 390
Query: 292 KVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEA 351
+ +H +K G V V N+LI +Y K +++ A+ +F + EK+IVSW ++IT+Y++
Sbjct: 391 RQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQV 450
Query: 352 GLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV-A 410
G +A E F DG M NVI+W+A++GA+ +G E+ L +++ M + V
Sbjct: 451 GNVAKAREFF------DG--MSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRP 502
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
+ VT L CA+ A +G +I G V+V + + V N ++ MY KCG + E VF
Sbjct: 503 DWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVF 562
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
+ + KD+++WN+MI+GY +G+G+ A+ F+++++ G KPD +++VAVLS CSH+GLV
Sbjct: 563 DFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQ 622
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
EG+ FDMM R I P +EH++CMVDLLGRAG L EA D++ +MPM+P A VWG LL++
Sbjct: 623 EGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSA 682
Query: 591 CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVA 650
C++H N ++AE A +F L + +GSYML++ IYA +G+ +D+A++R + KG+KK
Sbjct: 683 CKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNP 742
Query: 651 GQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
G SW+EV K+H+F + + + + + L+EL ++ G V
Sbjct: 743 GYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKIARLGYV 786
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 227/488 (46%), Gaps = 55/488 (11%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG- 127
+L+ YA+ GRL DA +F P +S WN+++ + Y +L+ ++ M + G
Sbjct: 77 MLNGYAKLGRLSDAVELFGRMPARDVAS---WNTLMSGYFQSRQYLVSLETFLSMHRSGD 133
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
+ FT +++C +G +V + Q + + L+ M+ + G +
Sbjct: 134 SWPNAFTLACAMKSCGALGWHSLALQLLAMVQ----KFDSQDDSEVAAALVDMFVRCGAV 189
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
+ +LF +++ N M +G+ + D ALELF M E + V+W ++S+
Sbjct: 190 DLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMP----ERDVVSWNMMVSAL 245
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
++ GR+ E +D+ M+ +G+ + + L+ CA L++ GK +H VI+
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDP 305
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
+V +AL+ +Y K G K A+ +F+ + ++N V+W LI+ + + G E+VE+F+Q+
Sbjct: 306 YVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQM--- 362
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
R +++ LD F ++ L+S C
Sbjct: 363 ------RAELMT-----------------LDQF-------------ALATLISGCCSRMD 386
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L +GR++H ++ + ++V N L++MY KC L+ +F + +KD+++W SMI+
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITA 446
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
Y G A F+ M E + + A+L A G +G R++ +M+ E + P
Sbjct: 447 YSQVGNVAKAREFFDGMSEKNV----ITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRP 502
Query: 548 QMEHYACM 555
Y +
Sbjct: 503 DWVTYVTL 510
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 203/434 (46%), Gaps = 16/434 (3%)
Query: 159 HNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF-DKVRVKNYISWNMMFSGFALNFD 217
H ++ +G V + N L+ Y G +SD+ +L + N I+ N+M +G+A
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 86
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE-VGAEAIA 276
A+ELF RM + +W +L+S + + + +++ F M + G A +A
Sbjct: 87 LSDAVELFGRMPAR----DVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLA 142
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
+ C L + + V K +D V AL+ ++ + G V +A LF I+E
Sbjct: 143 CAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEP 202
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
+ N+++ Y + D A+E+F SM +V+SW+ ++ A + +GR EA
Sbjct: 203 TMFCRNSMLAGYVKTYGVDHALELFD--------SMPERDVVSWNMMVSALSQSGRVREA 254
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
LD+ MQ V +S T + L+ CA ++L G+++H V+R + + V + L+ +
Sbjct: 255 LDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVEL 314
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y K GC +E VF + ++ + W +ISG+ G ++ F +M D A
Sbjct: 315 YAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFAL 374
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
++S C + GR++ + ++ +I+ + + ++ + + LQ A I + M
Sbjct: 375 ATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNS-LISMYAKCDNLQSAEAIFRFMN 433
Query: 577 MEPNAYVWGTLLNS 590
E + W +++ +
Sbjct: 434 -EKDIVSWTSMITA 446
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 186/383 (48%), Gaps = 21/383 (5%)
Query: 25 TYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
TY +SL C + ++ KQ+H Q+I + ++A+ ++ +YA+ G +A+
Sbjct: 272 TYTSSLTAC-----ARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKG 326
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
VF + +++ W ++ + G + +++L+ +MR + D F +I C
Sbjct: 327 VFNSLH---DRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGC-- 381
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
R G+ +H+ L+ G V + N LI MYAK + + +F + K+ +S
Sbjct: 382 --CSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVS 439
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MM 263
W M + ++ + A E F M E N +TW ++L ++ + G E+ + ++ M+
Sbjct: 440 WTSMITAYSQVGNVAKAREFFDGMS----EKNVITWNAMLGAYIQHGAEEDGLRMYKVML 495
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
+ + + CADL A+ +G I G +K G V NA+I +Y K G +
Sbjct: 496 SEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRI 555
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
A+ +F + K+IVSWNA+IT Y++ G+ +A+E+F + K +P+ IS+ AV
Sbjct: 556 LEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGA----KPDYISYVAV 611
Query: 384 IGAFASNGRGEEALDLFRKMQLA 406
+ + +G +E F M+ A
Sbjct: 612 LSGCSHSGLVQEGKFYFDMMKRA 634
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 155/352 (44%), Gaps = 47/352 (13%)
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN-LFS 331
+A A L C A + +HG ++ G VF++N L+ Y G + A+ L
Sbjct: 5 QAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLM 64
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+I N+++ N ++ YA+ G +AVE+F G M +V SW+ ++ + +
Sbjct: 65 DIAHPNVITHNVMLNGYAKLGRLSDAVELF--------GRMPARDVASWNTLMSGYFQSR 116
Query: 392 RGEEALDLFRKMQLA-KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
+ +L+ F M + N+ T++ + C ++ ++ V + + V
Sbjct: 117 QYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVA 176
Query: 451 NGLLNMYMKCGCLE---------------------EGHL----------VFEQIEKKDLI 479
L++M+++CG ++ G++ +F+ + ++D++
Sbjct: 177 AALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVV 236
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN M+S +G AL +M G + D + + L+AC+ + G+++ +
Sbjct: 237 SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 296
Query: 540 VREFRIEPQMEHY--ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+R P ++ Y + +V+L ++G +EA + ++ + N W L++
Sbjct: 297 IRNL---PHIDPYVASALVELYAKSGCFKEAKGVFNSLH-DRNNVAWTVLIS 344
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 212/744 (28%), Positives = 362/744 (48%), Gaps = 84/744 (11%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
+T+ L C C + + + +H ++ + + ++S+Y + L DAR
Sbjct: 8 VTFLTVLCSC-----SSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDAR 62
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
+VFE+ + + + + WN+++ NG AL LY +M G+ D TF V+ AC
Sbjct: 63 SVFESMDWR-QRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
+ G+ +HN V G + N L+ MYA+ G + D+ ++F ++ ++
Sbjct: 122 SLAQ-------GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDET 174
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELE-------------------------------- 231
SWN + + + D GAL +FK M+ +
Sbjct: 175 SWNAVILAHSQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIV 234
Query: 232 --GLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR----------------------- 266
G + + V T+L++ + +CG E ++FD M+KR
Sbjct: 235 ANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALE 294
Query: 267 --------GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG 318
G + +L C+ + A G+++H +++ G + V V AL+ +Y
Sbjct: 295 LYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYA 354
Query: 319 KHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
K G ++ A+ +F+ ++ ++ V+W+ LI +YA G +A + ++L GS + I
Sbjct: 355 KCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRL--GSR---DTI 409
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQ-LAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
SW+A+I + NG A+ +FR+M A + ++VT +L CA L+ + +H
Sbjct: 410 SWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQ 469
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
+ + N++V N L+NMY +CG LEE +F ++K +++W +M++ + G A
Sbjct: 470 ISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEA 529
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
L F+EM G KPD V + ++L C+H G + +G R F M + P +H+A MVD
Sbjct: 530 LDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVD 589
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
LLGR+G L +A +++++MP EP+ W T L +CR+H ++ EA A +++ L +T
Sbjct: 590 LLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAP 649
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
Y+ +SNIYAA G WE A VR + +GLKK+ G S+IEV K+H FSSG +
Sbjct: 650 YIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEI 709
Query: 678 CEVLEELALQMENKGCVPDNDIIL 701
CE L L M G VPD +L
Sbjct: 710 CEELTRLHGLMRAAGYVPDTKAVL 733
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 209/462 (45%), Gaps = 86/462 (18%)
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
D TF V+ +C G G+ +H + F+ + + N LI MY K + D+
Sbjct: 6 DNVTFLTVLCSCSSCGDV----VEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 191 FKLFDKV--RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+F+ + R +N +SWN M + +A N AL L+ RM L+GL + VT+ S
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVS------ 115
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
VL C+ LA G+ IH V G + +
Sbjct: 116 -----------------------------VLGACSSLA---QGREIHNRVFYSGLDSFQS 143
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
+ NAL+ +Y + G V A+ +F ++ ++ SWNA+I +++++G A+ +F ++ K D
Sbjct: 144 LANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCD 202
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
+PN ++ VI F++ L
Sbjct: 203 ----VKPNSTTYINVISGFST-----------------------------------PEVL 223
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
GR+IH +V + +++V L+NMY KCG E VF++++K+D+++WN MI Y
Sbjct: 224 PEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCY 283
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
+NG AL ++++ GFK FV++L ACS + +GR + ++ E ++ +
Sbjct: 284 VLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHIL-ERGLDSE 342
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
+ +V++ + G L+EA + M +A W TL+ +
Sbjct: 343 VAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGA 383
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 196/574 (34%), Positives = 325/574 (56%), Gaps = 66/574 (11%)
Query: 158 VHNHVL-QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H+ +L N + +L+ YA G+ + +FD++ KN + +N+M + N
Sbjct: 57 LHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNG 116
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
AL +FK M +G P+ T+ +L + + G L
Sbjct: 117 LYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNL----------------------- 153
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
+G IHG V+K G + +++ N L+ +YGK + A+ + E+ +
Sbjct: 154 ------------WVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGR 201
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKL----DGGSM-------------------- 372
++VSWN+++ YA+ G ++A+++ ++E L D G+M
Sbjct: 202 DMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKD 261
Query: 373 -----ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
+ ++ISW+ +I + +N EA+DL+ +MQ+ V ++V+IS +L C + +A
Sbjct: 262 MFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSA 321
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
+GR IH +V R + N+L++N L++MY KCGCL+E VF+Q+ +D+++W SMIS
Sbjct: 322 AVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISA 381
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
YGM+G G++A+A F++M ++GF PD +AFV+VL+ACSHAGLV+EGR F++M E+ I P
Sbjct: 382 YGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EYGITP 440
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
+EHY CMVDLLGRAG + EA + + MPMEPN VWG+LL++CR++ + ++A A +
Sbjct: 441 GIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHL 500
Query: 608 FGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG 667
F L E +G Y+LLSNIYA +GRW+D VR +KG+KK+ G S +E+ ++ F +G
Sbjct: 501 FQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAG 560
Query: 668 NSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ + K + + L L +M+ G +P+ D L
Sbjct: 561 DQSHTQSKEIYKALGVLVGRMKELGYMPETDSAL 594
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 216/435 (49%), Gaps = 53/435 (12%)
Query: 11 QFSPSNPSRPFSIITYNNSLLDCFDHLLQQ-CKTI-------HQLKQVHNQLIV-TGANA 61
QFS + ++PFS+ T L F L + C I LK++H+++++ +
Sbjct: 10 QFSTAKQTKPFSLTTQKPQLSPKFTALTEDLCNKILDVNPDAKTLKKLHSKILIDQNLHP 69
Query: 62 SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYV 121
+ L +++ YA G R++F+ + + +N ++R V+NGLY++AL ++
Sbjct: 70 NPSLGIKLMRAYAACGEPCYTRHIFDEI---TDKNVVFFNVMIRSYVNNGLYQDALLVFK 126
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
M G D +T+P V++AC G+ G +H V+++G N++I N L+ MY
Sbjct: 127 TMANQGFYPDNYTYPCVLKACSVSGNLWV----GLQIHGAVVKLGLDMNLYIGNGLVSMY 182
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN----- 236
K + + ++ D++ ++ +SWN M +G+A N + AL+L + ME L+P+
Sbjct: 183 GKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMG 242
Query: 237 ----------------------------FVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
++W +++ + E +DL+ M+ G+
Sbjct: 243 SLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGV 302
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
E A +I+ VL C DL+A +G+ IH +V + + ++NALI +Y K G +K A+
Sbjct: 303 EPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARA 362
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+F ++ +++VSW ++I++Y +G +AV +F ++ D G P+ I++ +V+ A +
Sbjct: 363 VFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMR--DSGFT--PDWIAFVSVLAACS 418
Query: 389 SNGRGEEALDLFRKM 403
G +E F M
Sbjct: 419 HAGLVDEGRYCFNLM 433
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 100/181 (55%), Gaps = 5/181 (2%)
Query: 94 KSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
K SL+ WN ++ V V+N + A+ LY++M+ GV D + V+ AC + +
Sbjct: 267 KEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAA---- 322
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H +V + + N+ + N LI MYAK G + ++ +FD++ ++ +SW M S +
Sbjct: 323 VLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAY 382
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
++ A+ LFK+M G P+++ + S+L++ + G ++E F++M + GI G
Sbjct: 383 GMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGI 442
Query: 273 E 273
E
Sbjct: 443 E 443
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 213/681 (31%), Positives = 358/681 (52%), Gaps = 67/681 (9%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+ +H + G ++ F+ ++++Y+R G L DA VF+ + WNSI+ +
Sbjct: 169 RALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAH 228
Query: 108 VSNGLYENALKLYVKM------RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI--VH 159
V AL+L+ +M + D + ++ AC + + QI +H
Sbjct: 229 VKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKAL------PQIKEIH 282
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
++ ++ G + + N LI YAK G M+D+ K+F+ + K+ +SWN M +G+ + +
Sbjct: 283 SYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFG 342
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
A ELF+ M E + + +TW+++++ +A+ G +E +D F M G E + I +L
Sbjct: 343 AAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLL 402
Query: 280 SVCADLAADHMGKVIHGFVIKGGF------------EDYVFVKNALICVYGKHGDVKVAQ 327
S CA L A G IH + +K + + V NALI +Y K K A+
Sbjct: 403 SACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAAR 462
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
++F I + ER NV++W+ +IG +
Sbjct: 463 SIFDSIPRR------------------------------------ER-NVVTWTVMIGGY 485
Query: 388 ASNGRGEEALDLFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
A G +AL +F +M + V N+ TIS +L CA AAL +G++IH +V R +
Sbjct: 486 AQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYE 545
Query: 446 N--ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
V N L++MY KCG ++ VF+ + K++ ++W SM+SGYGM+G G+ AL F++
Sbjct: 546 PSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDK 605
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M +AGF PD ++F+ +L ACSH+G+V++G FD+M R++ + EHYAC++DLL R G
Sbjct: 606 MQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCG 665
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
L +A ++ MPMEP+A +W LL++CR+H N ++AE +++ + E GSY L+SN
Sbjct: 666 RLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISN 725
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
IYA + RW+D A++R K G+KK G SW++ K+ F G+ + +LE
Sbjct: 726 IYANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLER 785
Query: 684 LALQMENKGCVPDNDIILWEM 704
L +++ G VP+ + L ++
Sbjct: 786 LIGRIKVMGYVPETNFALHDV 806
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 170/602 (28%), Positives = 287/602 (47%), Gaps = 83/602 (13%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGAN--------------------ASAFLAARVLSIY 73
F LL++C++++ ++Q+H ++I G + L V++ Y
Sbjct: 34 FASLLKECRSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSPKSLGTGVVASY 93
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
G DA +V E S ++ WN ++R ++ G + A+ + +M + G D F
Sbjct: 94 LACGATKDALSVLERVT---PSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHF 150
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
T P ++AC + S+ G+ +H + GF+ NV + N L+ MY++ G + D+ +
Sbjct: 151 TLPYALKACGELPSY----CCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLV 206
Query: 194 FDKVR---VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
FD++ + + ISWN + + + ALELF M + E
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHE---------------- 250
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
+ T + D++ +I +L CA L A K IH + I+ G FV
Sbjct: 251 ---KATNERSDII----------SIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVC 297
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
NALI Y K G + A +F+ +E K++VSWNA++T Y ++G A E+F + K +
Sbjct: 298 NALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKEN-- 355
Query: 371 SMERP-NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
P +VI+WSAVI +A G +EALD F++M L NSVTI LLS CA AL+
Sbjct: 356 ---IPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALS 412
Query: 430 IGREIHGHVVRVSM------------NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
G EIH + ++ + ++++V N L++MY KC + +F+ I +++
Sbjct: 413 QGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRE 472
Query: 478 --LITWNSMISGYGMNGLGENALATFEEMIEAGF--KPDGVAFVAVLSACSHAGLVNEGR 533
++TW MI GY G +AL F EMI + P+ +L AC+H + G+
Sbjct: 473 RNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGK 532
Query: 534 RIFDMMVREFRIEPQMEHYA-CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
+I + R EP + A C++D+ + G + A ++ +MP N W ++++
Sbjct: 533 QIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKR-NEVSWTSMMSGYG 591
Query: 593 MH 594
MH
Sbjct: 592 MH 593
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/450 (22%), Positives = 193/450 (42%), Gaps = 90/450 (20%)
Query: 230 LEGLEPNFVTWTSLL-SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
LE + P+ W +LL H + G L+ + + M + G + + L C +L +
Sbjct: 106 LERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSY 165
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK---NIVSWNALI 345
G+ +HG + GFE VFV NAL+ +Y + G ++ A +F EI K +++SWN+++
Sbjct: 166 CCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIV 225
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
++ + A+E+FS++ S ++ A+N R
Sbjct: 226 AAHVKGSNPRTALELFSEM----------------SMIVHEKATNER------------- 256
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
++ ++I +L CA AL +EIH + +R + V N L++ Y KCG + +
Sbjct: 257 ----SDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMND 312
Query: 466 GHLVFEQIEKKDLITWNSM-----------------------------------ISGYGM 490
VF +E KD+++WN+M I+GY
Sbjct: 313 AVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQ 372
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE---- 546
G + AL F++MI G +P+ V +++LSAC+ G +++G I +++ +
Sbjct: 373 RGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDND 432
Query: 547 -------PQMEHYACMVDLLGRAGLLQEASDIVKNMP-MEPNAYVWGTLLNSCRMHKNTD 598
+ Y ++D+ + + A I ++P E N W ++ + +++
Sbjct: 433 FGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSN 492
Query: 599 VAEAMASQIFGLITETTGSYMLLSNIYAAS 628
A + S++ + Y + N Y S
Sbjct: 493 DALKIFSEMI------SKPYAVAPNAYTIS 516
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 217/654 (33%), Positives = 348/654 (53%), Gaps = 92/654 (14%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVL-SIYARFGRLFDARNVFETAPFDCKS 95
LLQ+ KT Q+ Q+H QLI T + F A+R+L S+ ++ + A VF +
Sbjct: 17 LLQKSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIH---QP 73
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+S + N++++ + E AL+ Y +MR+ G+LGD +T+P V++AC M G
Sbjct: 74 NSFICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLE----G 129
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+V ++ GF G+V +VN LI MY + G+ + +FD GF+
Sbjct: 130 GLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFD---------------GFS-- 172
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
E + V+W S+L + CG +E ++FD M +R +
Sbjct: 173 ------------------EKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDV------- 207
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
V + D GK K G+V A+ F +
Sbjct: 208 -----VSWSIMIDGYGK--------------------------KMGEVNRARVFFDSMPT 236
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
+++VSWN++I YA+ G + A E+F + M + NVISWS +I +A + +E
Sbjct: 237 RDLVSWNSMIDGYAKVGEMEVAREIFDK--------MLQKNVISWSIMIDGYAQHRDSKE 288
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
AL+LFR+M + + V++ G +S C++ AL+ GR IH ++ R M +I+VQ L++
Sbjct: 289 ALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVD 348
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY+KCG +E +F + ++++++WN MI G GMNG G+ AL F +M D +
Sbjct: 349 MYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLL 408
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
F+ VL ACSHA LV EG IF+ M +R+EP++EHY C+VDLLGRAG L + +I+++M
Sbjct: 409 FLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSM 468
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
PM+PNA +WG+LL +CR+H+N +AE + ++ L + +G Y+L+SNIYA G WE
Sbjct: 469 PMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGML 528
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS---LQSDLKNVCEVLEELAL 686
++R K + +KK G+S IEV + F SG L+ +++ V L ++A+
Sbjct: 529 RIRKLMKERKMKKDIGRSVIEVDGNVEEFVSGEKSHILREEIELVIWSLAKMAM 582
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 213/686 (31%), Positives = 361/686 (52%), Gaps = 46/686 (6%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH Q I G N++ ++ + ++++YA+ ++ A+ VF+ + + +LWN++L
Sbjct: 371 VHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALD---ERNLVLWNAMLGGYAQ 427
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
NG +KL+ +MR G D FT+ ++ AC + G+ +H+ +++ F+
Sbjct: 428 NGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEM----GRQLHSFIIKHNFEY 483
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
N+ + N L+ MYAK G + ++ + F+ +R ++ +SWN + G+ D D A +F+RM
Sbjct: 484 NLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMI 543
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
L+G+ P+ V+ S+LS A LE+ + + K G++ A + ++ + A
Sbjct: 544 LDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIE 603
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+ +V V NA+I Y ++ D+ A +LF E++ + + S
Sbjct: 604 AAR----YVFSCMPSRSVVSMNAIIAGYAQN-DLVEAIDLFQEMQNEGLNPSEITFASLL 658
Query: 350 EAGLCDEAVEVFSQLEKL--------DG------------------------GSMERP-N 376
+A + + Q+ L DG + P +
Sbjct: 659 DACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKS 718
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
I W+A+I NG EEAL L+++M + T + +L C+ A+L GR IH
Sbjct: 719 TILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHS 778
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI-EKKDLITWNSMISGYGMNGLGE 495
+ V ++ + L + +++MY KCG ++ VFE++ K D+I+WNSMI G+ NG E
Sbjct: 779 LIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAE 838
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
NAL F+EM +PD V F+ VL+ACSHAG V+EGR IFD+MV ++I P+++H ACM
Sbjct: 839 NALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACM 898
Query: 556 VDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETT 615
+DLLGR G L+EA + + + EPNA +W TLL +CR+H + A ++ L E +
Sbjct: 899 IDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENS 958
Query: 616 GSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLK 675
Y+LLSNIYAASG W++ VR + + KGL+K+ G SWI V +K ++F +G+
Sbjct: 959 SPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSAG 1018
Query: 676 NVCEVLEELALQMENKGCVPDNDIIL 701
+ +L++L M+ G + + D +L
Sbjct: 1019 EIHALLKDLIALMKEDGYIAETDSLL 1044
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 164/636 (25%), Positives = 280/636 (44%), Gaps = 108/636 (16%)
Query: 1 MRH-----SLLHQPHQFSPSNPSRPFSIITYN---NSLLDCFDHLL----QQCKTI---H 45
MRH + LH+ + S + S FS I S F HLL QQC+ I H
Sbjct: 26 MRHGRAPFTTLHRSNSLSFHHQSN-FSTIQRQVNQTSEHKIFTHLLKICLQQCQRIKIRH 84
Query: 46 QL--------------KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPF 91
K +H Q + G + L + ++ +YA+ G + A F
Sbjct: 85 PFDETPQRLAQASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLE- 143
Query: 92 DCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR 151
K L WNS+L + G E + + ++ GV + FT+ +V+ +C +
Sbjct: 144 --KRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARL----VD 197
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
G+ VH V++MGF+ N LI MY+K G + D+ K+FD V + +SW M +G
Sbjct: 198 IDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAG 257
Query: 212 FALNFDCDGALELFKRMELEGLEP-------------------------------NFVTW 240
+ + AL++F+ M+ GL P N V W
Sbjct: 258 YVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAW 317
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
++S H + G E +D F M K G++ + VLS A L A + G ++H IK
Sbjct: 318 NVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIK 377
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G V+V ++LI +Y K ++ A+ +F ++E+
Sbjct: 378 QGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDER------------------------ 413
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
N++ W+A++G +A NG + + LF +M+ + T + +LS
Sbjct: 414 ---------------NLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILS 458
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
CA L +GR++H +++ + N+ V+N L++MY KCG LEE FE I +D ++
Sbjct: 459 ACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVS 518
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WN++I GY + A F MI G PD V+ ++LS C++ + +G ++ +V
Sbjct: 519 WNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLV 578
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
+ ++ + + ++D+ + G ++ A + MP
Sbjct: 579 KS-GLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMP 613
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 162/341 (47%), Gaps = 28/341 (8%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASA-FLAARVLSIYARFGRLFDARNVFETA 89
F LL C ++L +Q+H + G FL +L +Y R DA +F +
Sbjct: 654 FASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILF--S 711
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
F S++LW +I+ + NG E AL+LY +M + D TF V+RAC + S
Sbjct: 712 EFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASL- 770
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN-YISWNMM 208
G+++H+ + +G + + ++ MYAK G M S ++F+++ KN ISWN M
Sbjct: 771 ---GDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSM 827
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
GFA N + AL++F M+ + P+ VT+ +L++ + GR+ E ++FD+M
Sbjct: 828 IVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIM----- 882
Query: 269 EVGAEAIAVVLSVCADLAADHMG-----KVIHGFVIKGGFEDYVFVKNALICVYGKHGD- 322
V + I L CA + D +G K F+ K FE + L+ HGD
Sbjct: 883 -VHSYKIVPRLDHCACM-IDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDD 940
Query: 323 ---VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
+ A+ L E+E +N + L YA +G DE V
Sbjct: 941 IRGRRAAEKLI-ELEPENSSPYVLLSNIYAASGNWDEVNSV 980
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 131/592 (22%), Positives = 257/592 (43%), Gaps = 110/592 (18%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ +L C + L +Q+H+ +I + F+ ++ +YA+ G L +AR FE
Sbjct: 453 YTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFE--- 509
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
F ++ WN+I+ V + A ++ +M G+ D + ++ C + +
Sbjct: 510 FIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQ 569
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ VH +++ G Q ++ + LI MY K G + + +F + ++ +S N + +
Sbjct: 570 ----GEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIA 625
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
G+A N D A++LF+ M+ EGL P+ +T+ SLL + +L + +++KRG+
Sbjct: 626 GYAQN-DLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLY 684
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN-----ALICVYGKHGDVKV 325
+ + V L V + + K + F ++ + K+ A+I + ++G +
Sbjct: 685 DGDFLGVSLLV---MYMNSQRKTDADIL----FSEFQYPKSTILWTAIISGHTQNGCSEE 737
Query: 326 AQNLFSEIEEKNI---------------------------------------VSWNALIT 346
A L+ E+ N ++ +A++
Sbjct: 738 ALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVD 797
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
YA+ G +V+VF ++ GS + +VISW+++I FA NG E AL +F +M+
Sbjct: 798 MYAKCGDMKSSVQVFEEM-----GS--KNDVISWNSMIVGFAKNGYAENALKIFDEMKHT 850
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN-GLLNMYMKCGCLEE 465
++ + VT G+L+ C+ + ++ GREI +I+V + ++ C C
Sbjct: 851 RIRPDDVTFLGVLTACSHAGRVSEGREIF----------DIMVHSYKIVPRLDHCAC--- 897
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA-GFKPDGVAFVAVLSACS 524
MI G G + A EE I+ F+P+ + + +L AC
Sbjct: 898 ------------------MIDLLGRWGFLKEA----EEFIDKLNFEPNAMIWATLLGACR 935
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQ-MEHYACMVDLLGRAGLLQEASDIVKNM 575
G GRR + ++ +EP+ Y + ++ +G E + + + M
Sbjct: 936 IHGDDIRGRRAAEKLI---ELEPENSSPYVLLSNIYAASGNWDEVNSVRRAM 984
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 86/205 (41%), Gaps = 43/205 (20%)
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
+ A + IH ++ + + ++++Y KCG +E F Q+EK+D++ WNS+
Sbjct: 94 AQASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSV 153
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS-----------HAGLVNEG- 532
+S Y G E + F + G P+ + VLS+C+ H G++ G
Sbjct: 154 LSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGF 213
Query: 533 -----------------------RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
R+IFD +V +P + M+ + GL +EA
Sbjct: 214 EFNSFCEGSLIDMYSKCGSLVDARKIFDAVV-----DPDTVSWTAMIAGYVQVGLPEEAL 268
Query: 570 DIVKNMP---MEPNAYVWGTLLNSC 591
+ ++M + P+ + T++ +C
Sbjct: 269 KVFEDMQKLGLVPDQVAFVTVITAC 293
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 178/501 (35%), Positives = 296/501 (59%), Gaps = 29/501 (5%)
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
LE N V + ++ S+ E + +F +M VL C+ L +G
Sbjct: 98 LEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGL 157
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+H ++K G + +F+ NAL+ +YGK G ++ A+ + ++ +++VSWN+++ YA++G
Sbjct: 158 QVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSG 217
Query: 353 LCDEAVEVFSQLEKL----DGGSM-------------------------ERPNVISWSAV 383
D+A+E+ +++ L D G+M + N+ISW+ +
Sbjct: 218 QFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVM 277
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
I + +N EA+ LF +M+ + ++VTI+ LL C + +AL +GR +H ++ + ++
Sbjct: 278 IAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNL 337
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
N+L++N LL+MY KCGCLEE VF+++ +D+++W SM+S YG +G G +A+A F +
Sbjct: 338 QPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAK 397
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M+++G PD +AFV+VLSACSH GL+++GR F MM ++ I P++EH+ACMVDL GRAG
Sbjct: 398 MLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAG 457
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
++EA +K MPMEPN VWG LL++CR+H D+ A +F L + +G Y+LLSN
Sbjct: 458 EVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSN 517
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
IYA +G W+D VR + K G+KKV G S +E+ ++H F +G+ KN+ L+
Sbjct: 518 IYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDV 577
Query: 684 LALQMENKGCVPDNDIILWEM 704
L +M+ G +P + L ++
Sbjct: 578 LVGKMKELGYIPQTESALHDV 598
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 207/401 (51%), Gaps = 45/401 (11%)
Query: 37 LLQQCKTIHQLKQVHNQLIVT-GANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
+L Q I L ++H+++++ LA +++ Y+ G AR +F+ + +
Sbjct: 44 ILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRS---LEK 100
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ + +N ++R V+N LY AL ++ M D +TFP V++AC + + R G
Sbjct: 101 NVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRV----G 156
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
VH+ ++++G N+ I N L+ MY K G + ++ K+ D++ ++ +SWN M +G+A +
Sbjct: 157 LQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQS 216
Query: 216 FDCDGALELFKRME----------LEGLEP-----------------------NFVTWTS 242
D ALE+ K M+ + L P N ++W
Sbjct: 217 GQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNV 276
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
+++ + E + LF M + G++ A IA +L C DL+A +G+ +H ++ KG
Sbjct: 277 MIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGN 336
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
+ + ++NAL+ +Y K G ++ A+++F ++ +++VSW +++++Y +G +AV +F+
Sbjct: 337 LQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFA 396
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
++ LD G + P+ I++ +V+ A + G ++ FR M
Sbjct: 397 KM--LDSG--QNPDSIAFVSVLSACSHTGLLDQGRHYFRMM 433
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 158/340 (46%), Gaps = 26/340 (7%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
FD L+ CK + L H+ A A L+ V Y + N+FE
Sbjct: 219 FDDALEICKEMDSLNLNHD------AGTMASLSPVV--CYTSLENVQYIHNMFERMT--- 267
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K + + WN ++ + V+N + A+ L+++M + G+ D T ++ AC G F
Sbjct: 268 KKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPAC---GDLSALF- 323
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H ++ + Q N+ + N L+ MYAK G + ++ +FDK+R+++ +SW M S +
Sbjct: 324 LGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYG 383
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGA 272
+ A+ LF +M G P+ + + S+LS+ + G L++ F MM ++ GI
Sbjct: 384 RSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRI 443
Query: 273 EAIAVVLSVCADLAADHMGKV--IHGFVIKGGFEDYVFVKNALICVYGKHGDVK---VAQ 327
E A ++ + G+V + F+ + E V AL+ H + VA
Sbjct: 444 EHFACMVDLFG-----RAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAA 498
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
+L ++ K + L YA+AG+ + + V ++K+
Sbjct: 499 DLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKI 538
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L+ Y G +F++ +K+++ +N MI Y N L AL+ F+ M+ F PD
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
F VL ACS + G ++ D +V+ ++ + +V + G+ G L+EA ++
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVK-VGLDTNLFIGNALVAMYGKCGCLREARKVL 195
Query: 573 KNMPMEPNAYVWGTLL 588
MP + W +++
Sbjct: 196 DQMPYR-DVVSWNSMV 210
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 230/762 (30%), Positives = 380/762 (49%), Gaps = 77/762 (10%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F+ + C +H KQ+H L+V+G S FL+A++++ YA G + AR F+
Sbjct: 46 FNRIFLYCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQ--- 102
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL-GDGFTFPLVIRACKFMGSFRFRF 152
WNS++ G + A+ + + L D +TFP VIRAC +
Sbjct: 103 TKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD----- 157
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ VH VL++GF+ +V+I I Y++ G +S + LFD + +++ +WN M SGF
Sbjct: 158 --GRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGF 215
Query: 213 ALNFDCDGALELFKRMELE-----------------------------------GLEPNF 237
LN ALE+F M + GLE +
Sbjct: 216 YLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDL 275
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
+L++ +A+ G L +F+ M+ R I +A + A + +H
Sbjct: 276 FVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSI 335
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK-----NIVSWNALITSYAEAG 352
G + +L V + G+ ++++ + + +I NA+I YA+ G
Sbjct: 336 ----GVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLG 391
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL-AKVVAN 411
D A +VF L D VISW+++I ++ NG EA+D++ M+ + V N
Sbjct: 392 FIDSARKVFEGLPVKD--------VISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPN 443
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
T +L+ ++ AL G + HG +++ + +I V L++MY KCG L + +F
Sbjct: 444 QGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFY 503
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
++ + ++WN++IS +G++G G A+ F+EM G KPD + FV++LSACSH+GLV+E
Sbjct: 504 EVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDE 563
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
G+ F +M + I P ++HY CMVDL GRAG L++A + VKNMP+ P+ VWG LL +C
Sbjct: 564 GQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGAC 623
Query: 592 RMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
R+H+N ++ ++ + + +E G Y+LLSNIYA G WE +VR A+ +GLKK G
Sbjct: 624 RIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPG 683
Query: 652 QSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVK 711
S IEV +KI +F +GN + + L L +M++ G VPD + +L +
Sbjct: 684 WSSIEVDKKIDVFYTGNQTHPKCEEIYSELRNLTAKMKSIGYVPDYNFVL---------Q 734
Query: 712 RIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRSTNGQLMKN 753
++ +NI + H L + ++ + T Q+ KN
Sbjct: 735 DVEDDEKENILTSHS----ERLAMAFGIISTPPKTTLQIFKN 772
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 210/685 (30%), Positives = 360/685 (52%), Gaps = 84/685 (12%)
Query: 32 DCFDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
D F LLQ+C +++ Q ++VH ++ +G + +L +LS+YA+ G L DAR VF+
Sbjct: 97 DVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDG 156
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
+ + W +++ V+ A K Y M+ G D TF ++ A F
Sbjct: 157 IR---DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNA--FTNPE 211
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
+ GQ VH + + G + + L+GMYAK G +S + +FDK+ KN ++W ++
Sbjct: 212 LLQV--GQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLL 269
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+G+A D ALEL ++M+ + PN +T+TS+L
Sbjct: 270 IAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQ----------------------- 306
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
LA +H GK +H ++I+ G+ ++V NALI +Y K G +K A+
Sbjct: 307 -----------GCTTPLALEH-GKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARK 354
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
LF ++ +++V+W A++T YA+ G DEA+++F ++++ +P+ +++++ + + +
Sbjct: 355 LFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQ----QGIKPDKMTFTSALTSCS 410
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
S +E + +++ A + S L+S+ A+ +++ R
Sbjct: 411 SPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDAR---------------- 454
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
LVF Q+ +++++ W +MI+G +G AL FE+M + G
Sbjct: 455 -------------------LVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQG 495
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
KPD V F +VLSAC+H GLV EGR+ F M ++ I+P +EHY+C VDLLGRAG L+EA
Sbjct: 496 IKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEA 555
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
+++ MP +P VWG LL++CR+H + + E A + L + G+Y+ LSNIYAA+
Sbjct: 556 ENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAA 615
Query: 629 GRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
GR+EDA KVR + + + K GQSWIEV K+H+F + + K + L +L Q+
Sbjct: 616 GRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPEAKEIYAELGKLTEQI 675
Query: 689 ENKGCVPDNDIILWEMMGKKNVKRI 713
+ +G VPD +L ++ ++ V+ +
Sbjct: 676 KEQGYVPDTRFVLHDVDEEQKVQTL 700
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 186/409 (45%), Gaps = 70/409 (17%)
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
GRL+E + + + M +G V ++ +L CA L + G+ +H ++K G + +++
Sbjct: 75 GRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLE 134
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA------EAGLCDEAVEV---- 360
N L+ +Y K G + A+ +F I ++NIVSW A+I ++ EA C E +++
Sbjct: 135 NTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCK 194
Query: 361 ------------FSQLEKLDGGS---ME--------RPNVISWSAVIGAFASNGRGEEAL 397
F+ E L G ME P V ++++G +A G +A
Sbjct: 195 PDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRV--GTSLVGMYAKCGDISKAQ 252
Query: 398 DLFRKMQLAKVV-------------------------------ANSVTISGLLSVCAESA 426
+F K+ VV N +T + +L C
Sbjct: 253 VIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPL 312
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
AL G+++H ++++ + I V N L+ MY KCG L+E +F + +D++TW +M++
Sbjct: 313 ALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVT 372
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRI 545
GY G + A+ F M + G KPD + F + L++CS + EG+ I +V + +
Sbjct: 373 GYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSL 432
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+ ++ + +V + + G + +A +V N E N W ++ C H
Sbjct: 433 DVYLQ--SALVSMYAKCGSMDDAR-LVFNQMSERNVVAWTAMITGCAQH 478
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 110/226 (48%), Gaps = 4/226 (1%)
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH 435
+ ++ S + GR +EAL + M L S GLL CA +L GRE+H
Sbjct: 60 DTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVH 119
Query: 436 GHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
+++ + N ++N LL+MY KCG L + VF+ I +++++W +MI +
Sbjct: 120 AAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNL 179
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHYAC 554
A +E M AG KPD V FV++L+A ++ L+ G+++ + + +EP++
Sbjct: 180 EAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVG--TS 237
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
+V + + G + +A I +P E N W L+ DVA
Sbjct: 238 LVGMYAKCGDISKAQVIFDKLP-EKNVVTWTLLIAGYAQQGQVDVA 282
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 211/719 (29%), Positives = 363/719 (50%), Gaps = 114/719 (15%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPF-DCKSSSLLWNSILRV 106
+ VH TG + ++ + ++ +Y+ G L DAR+ F+ P+ DC +LWN ++
Sbjct: 161 RLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDC----VLWNVMMDG 216
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
+ G A++L+ MR G + T + C G +H+ ++ G
Sbjct: 217 YIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLS----GVQLHSLAVKCG 272
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+ V + N L+ MYAK + D+++LF+ + + ++WN M SG N D AL LF
Sbjct: 273 LEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFC 332
Query: 227 RMELEGLEPNFVTWTSLLSS-----------------------------------HARCG 251
M G P+ VT SLL + + +C
Sbjct: 333 DMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCR 392
Query: 252 RLEETMDLFDMMRKRGIEVG-------------------------------AEAIAVVLS 280
+ +L+D R + +G A +A VL
Sbjct: 393 DVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLP 452
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
CA ++A +G+ IHG+V++ +E +V++AL+ +Y K G + ++ +FS++ K+ V+
Sbjct: 453 ACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVT 512
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
WN++I+S+++ G EA++ LF
Sbjct: 513 WNSMISSFSQNGEPQEALD---------------------------------------LF 533
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
R+M + + N+VTIS LS CA A+ G+EIHG +++ + +I ++ L++MY KC
Sbjct: 534 RQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKC 593
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
G +E VFE + K+ ++WNS+IS YG +GL + +++ M E G+KPD V F+A++
Sbjct: 594 GNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALI 653
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
SAC+HAGLV EG ++F M +E+ I P+MEH+ACMVDL R+G L +A + +MP +P+
Sbjct: 654 SACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPD 713
Query: 581 AYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRIS 640
A +WG LL++CR+H+N ++A+ + ++F L +G Y+L+SNI A +GRW+ +KVR
Sbjct: 714 AGIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRL 773
Query: 641 AKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDI 699
K + K+ G SW++V H+F + + + +++ L+ L ++ +G VP D+
Sbjct: 774 MKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDIYTSLKALLQELREEGYVPRPDL 832
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 175/659 (26%), Positives = 287/659 (43%), Gaps = 126/659 (19%)
Query: 17 PSRPFSIITYNN-------SLLDCFDHLLQQCKTIHQLK---QVHNQLIVTGA---NASA 63
P RP T++ S D LL+ C + L Q+H + +V+GA +
Sbjct: 11 PRRPCCSTTFSATEVVTDVSSADRLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHL 70
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM 123
L R+L +Y R DA VF P SSL WN ++R + G + A+ YVKM
Sbjct: 71 ALHTRLLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKM 130
Query: 124 --RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
D T P V+++C +G+ S G++VH G +V++ + LI MY
Sbjct: 131 WTHPAAPSPDAHTLPYVVKSCAALGAV----SLGRLVHRTARATGLASDVYVGSALIKMY 186
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
+ G + D+ FD + ++ + WN+M G+ D GA+ LF+ M + G EPNF T
Sbjct: 187 SDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFAT-- 244
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
+A LSVCA A G +H +K
Sbjct: 245 ---------------------------------LACFLSVCAAEADLLSGVQLHSLAVKC 271
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
G E V V N L+ +Y K + A LF + ++V+WN +I+ + GL DEA+ +F
Sbjct: 272 GLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLF 331
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFAS-NG--RGEE----------------------- 395
+ + S RP+ ++ +++ A NG +G+E
Sbjct: 332 CDMLR----SGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDI 387
Query: 396 ---------ALDLFRKMQLAKVVANSVTISG----------------------------- 417
A +L+ + VV S ISG
Sbjct: 388 YFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTV 447
Query: 418 --LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
+L CA +AL +G+EIHG+V+R + V++ L++MY KCG L+ H +F ++
Sbjct: 448 ASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSL 507
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
KD +TWNSMIS + NG + AL F +M G K + V + LSAC+ + G+ I
Sbjct: 508 KDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEI 567
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
++++ I+ + + ++D+ + G ++ A + + MP + N W +++++ H
Sbjct: 568 HGVIIKG-PIKADIFAESALIDMYAKCGNMELALRVFEFMP-DKNEVSWNSIISAYGAH 624
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 194/367 (52%), Gaps = 46/367 (12%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
+ Q K+VH +I + AFL + ++ IY + + ARN+++ A ++ +++
Sbjct: 359 LKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAAR---AIDVVIGSTV 415
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
+ V NG+ E AL+++ + + + + T V+ AC + + GQ +H +VL
Sbjct: 416 ISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISAL----PLGQEIHGYVL 471
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
+ ++G ++ + L+ MYAK G++ S +F K+ +K+ ++WN M S F+ N + AL+
Sbjct: 472 RNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALD 531
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
LF++M +EG++ N VT I+ LS CA
Sbjct: 532 LFRQMCMEGIKYNNVT-----------------------------------ISSALSACA 556
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
L A + GK IHG +IKG + +F ++ALI +Y K G++++A +F + +KN VSWN+
Sbjct: 557 SLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNS 616
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+I++Y GL E+V ++++ +G +P+ +++ A+I A A G EE L LF+ M
Sbjct: 617 IISAYGAHGLVKESVSFLHRMQE-EG---YKPDHVTFLALISACAHAGLVEEGLQLFQCM 672
Query: 404 QLAKVVA 410
++A
Sbjct: 673 TKEYLIA 679
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
I YNN + I+ K++H +I A F + ++ +YA+ G + A
Sbjct: 541 IKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELAL 600
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
VFE P + + WNSI+ ++GL + ++ +M++ G D TF +I AC
Sbjct: 601 RVFEFMP---DKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACA 657
Query: 144 FMG 146
G
Sbjct: 658 HAG 660
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 219/697 (31%), Positives = 364/697 (52%), Gaps = 67/697 (9%)
Query: 15 SNPSRPFSIITYNN---SLLDCFDHLLQQCKTIHQLKQVHNQLIVTG-----ANASAFLA 66
SNP+ I+T NN S L+ +C LKQ+H ++ TG +A+
Sbjct: 15 SNPT----ILTANNEQKSNPSTVPILIDKCANKKHLKQLHAHMLRTGLFFDPPSATKLFT 70
Query: 67 ARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM-RK 125
A LS + A VF+ P + + WN+++R S+ L ++++M +
Sbjct: 71 ACALSSPSSLDY---ACKVFDQIP---RPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHE 124
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
+ +TFP VI+A + S GQ +H V++ F ++ I N LI Y+ +G
Sbjct: 125 SQRFPNSYTFPFVIKAATEVSSLLA----GQAIHGMVMKASFGSDLFISNSLIHFYSSLG 180
Query: 186 QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
+ ++ +F K+ +E + V+W S++S
Sbjct: 181 DLDSAYLVFSKI-----------------------------------VEKDIVSWNSMIS 205
Query: 246 SHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
+ G EE + LF M+ + VLS CA G+ ++ + G +
Sbjct: 206 GFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDI 265
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
+ + NA++ +Y K G ++ A+ LF ++EEK+IVSW +I YA+ G D A VF
Sbjct: 266 NLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFD--- 322
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK-VVANSVTISGLLSVCAE 424
M R ++ +W+A+I ++ NG+ +EAL +FR++QL K N VT++ L+ CA+
Sbjct: 323 -----VMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQ 377
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
A+++G IH ++ + + N + L++MY KCG LE+ VF +E++D+ W++M
Sbjct: 378 LGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAM 437
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I+G M+G G A+ F +M E KP+ V F +L ACSH+GLV+EGR F+ M +
Sbjct: 438 IAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYG 497
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
+ P +HYACMVD+LGRAG L+EA ++++ MP+ P+A VWG LL +CR++ N ++AE
Sbjct: 498 VVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMAC 557
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
S++ + G+Y+LLSNIYA +G+W+ +++R K GL+K G S IEV IH F
Sbjct: 558 SRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEF 617
Query: 665 SSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
G++ + L+E+ ++++ G V D +L
Sbjct: 618 LVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLL 654
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 222/741 (29%), Positives = 367/741 (49%), Gaps = 117/741 (15%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C L KQVH ++VTG ++ F+A ++ +YA+ G DAR++F+ P
Sbjct: 13 FPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIP 72
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM-GSFR 149
S + WN++ V + ++ A+ L+ M G+ + F+ +I C + S +
Sbjct: 73 ---DRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQ 129
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+ +H +++++G+ + N L+ MYAK+G + D+ +FD++ + +SWN +
Sbjct: 130 -----GRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAII 184
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTS--------------------------- 242
+G L+ ALEL + M G+ PN T +S
Sbjct: 185 AGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMG 244
Query: 243 --------LLSSHARCGRLEETMDLFDMMRKR---------------------------- 266
L+ +++C +++ +F +M +R
Sbjct: 245 SDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLM 304
Query: 267 ---GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
GI ++ VL A L A++M + IH +K GFE +V N+LI YGK G V
Sbjct: 305 HTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHV 364
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
+ A +F E ++V + +L+T+YA+ G +EA
Sbjct: 365 EDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEA-------------------------- 398
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
L L+ +MQ + +S S LL+ CA +A G+++H H+++
Sbjct: 399 -------------LRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGF 445
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
+I N L+NMY KCG +E+ F +I + +++W++MI G +G G+ AL F++
Sbjct: 446 MSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQ 505
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M++ G P+ + V+VL AC+HAGLV E + F+ M F IEP EHYACM+DLLGRAG
Sbjct: 506 MLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAG 565
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
L+ A ++V MP + NA VWG LL + R+HKN D+ E A + L E +G+++LL+N
Sbjct: 566 KLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLAN 625
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
IYA+ G W+ A+VR K +KK G SW+EVK K++ F G+ S + L+E
Sbjct: 626 IYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSHSRSTEIYAKLDE 685
Query: 684 LALQMENKGCVPDNDIILWEM 704
L+ ++ G VP +I L ++
Sbjct: 686 LSDLLKKAGYVPMVEIDLHDV 706
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 232/535 (43%), Gaps = 105/535 (19%)
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M LG+ + F FP V++AC G+ VH V+ GF + + N L+ +YA
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKD----LVLGKQVHGIVVVTGFDSDEFVANSLVILYA 56
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG-ALELFKRMELEGLEPNFVTWT 241
K G D+ LFD + ++ +SWN +FS + ++ D G A+ LF M L G+ PN + +
Sbjct: 57 KCGGFGDARSLFDAIPDRSVVSWNALFSCY-VHSDMHGEAVSLFHDMVLSGIRPNEFSLS 115
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
S+ ++VC L G+ IHG++IK
Sbjct: 116 SM-----------------------------------INVCTGLEDSVQGRKIHGYLIKL 140
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA------------ 349
G++ F NAL+ +Y K G ++ A ++F EI + +IVSWNA+I
Sbjct: 141 GYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELL 200
Query: 350 ----EAGLCDEAV-------------------EVFSQLEKLDGGS--------------- 371
++G+C ++ S L K+D GS
Sbjct: 201 REMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKC 260
Query: 372 ------------MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
M ++I+W+AVI + N EEA LF M + N T+S +L
Sbjct: 261 NSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVL 320
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
A A + R+IH ++ + V N L++ Y KCG +E+ VFE+ DL+
Sbjct: 321 KSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLV 380
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+ S+++ Y +G GE AL + EM + G KPD ++L+AC+ +G+++ +
Sbjct: 381 LFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVH-VH 439
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+ +F + +V++ + G +++AS +P+ W ++ H
Sbjct: 440 ILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVR-GIVSWSAMIGGLAQH 493
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 161/356 (45%), Gaps = 48/356 (13%)
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
M GI+ A VL C +GK +HG V+ GF+ FV N+L+ +Y K G
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
A++LF I +++ V+SW+A
Sbjct: 61 FGDARSLFDAIPDRS---------------------------------------VVSWNA 81
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS 442
+ + + EA+ LF M L+ + N ++S +++VC GR+IHG+++++
Sbjct: 82 LFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLG 141
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFE 502
+ + N L++MY K G LE+ VF++I K D+++WN++I+G ++ AL
Sbjct: 142 YDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLR 201
Query: 503 EMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY--ACMVDLLG 560
EM ++G P+ + L AC+ L GR++ ++ +++ + + ++D+
Sbjct: 202 EMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLI---KMDMGSDSFLGVGLIDMYS 258
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
+ + +A + K MP E + W +++ H + E AS + TE G
Sbjct: 259 KCNSMDDARLVFKLMP-ERDMIAWNAVISG---HSQNEEDEEAASLFPLMHTEGIG 310
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 166/363 (45%), Gaps = 21/363 (5%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
I +N + L + + + +Q+H + +G ++ ++ Y + G + DA
Sbjct: 309 IGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDAT 368
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
VFE +P +L+ S++ +G E AL+LY++M+ G+ D F ++ AC
Sbjct: 369 RVFEESPI---VDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACA 425
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
+ ++ G+ VH H+L+ GF ++ N L+ MYAK G + D+ F ++ V+ +
Sbjct: 426 SLSAYEQ----GKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIV 481
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
SW+ M G A + AL+LFK+M G+ PN +T S+L + G + E F+ M
Sbjct: 482 SWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSM 541
Query: 264 RKR-GIEVGAEAIAVVLSVCADLAADHMGKVIHG--FVIKGGFEDYVFVKNALICVYGKH 320
+ GIE E A ++ + GK+ V K F+ V AL+ H
Sbjct: 542 KILFGIEPMQEHYACMIDLLG-----RAGKLEAAMELVNKMPFQANALVWGALLGAARIH 596
Query: 321 GDVKV---AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
++ + A + +E + + L YA G+ D+ V ++ DG + P
Sbjct: 597 KNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMK--DGKVKKEPG- 653
Query: 378 ISW 380
+SW
Sbjct: 654 MSW 656
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 178/501 (35%), Positives = 296/501 (59%), Gaps = 29/501 (5%)
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
LE N V + ++ S+ E + +F +M VL C+ L +G
Sbjct: 98 LEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGL 157
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+H ++K G + +F+ NAL+ +YGK G ++ A+ + ++ +++VSWN+++ YA++G
Sbjct: 158 QVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSG 217
Query: 353 LCDEAVEVFSQLEKL----DGGSM-------------------------ERPNVISWSAV 383
D+A+E+ +++ L D G+M + N+ISW+ +
Sbjct: 218 QFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVM 277
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
I + +N EA+ LF +M+ + ++VTI+ LL C + +AL +GR +H ++ + ++
Sbjct: 278 IAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNL 337
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
N+L++N LL+MY KCGCLEE VF+++ +D+++W SM+S YG +G G +A+A F +
Sbjct: 338 RPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAK 397
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M+++G PD +AFV+VLSACSH GL+++GR F MM ++ I P++EH+ACMVDL GRAG
Sbjct: 398 MLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAG 457
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
++EA +K MPMEPN VWG LL++CR+H D+ A +F L + +G Y+LLSN
Sbjct: 458 EVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSN 517
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
IYA +G W+D VR + K G+KKV G S +E+ ++H F +G+ KN+ L+
Sbjct: 518 IYAKAGMWKDVMNVRYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDV 577
Query: 684 LALQMENKGCVPDNDIILWEM 704
L +M+ G +P + L ++
Sbjct: 578 LVGKMKELGYIPQTESALHDV 598
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 206/401 (51%), Gaps = 45/401 (11%)
Query: 37 LLQQCKTIHQLKQVHNQLIVT-GANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
+L Q I L ++H+++++ LA +++ Y+ G AR +F+ + +
Sbjct: 44 ILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRS---LEK 100
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ + +N ++R V+N LY AL ++ M D +TFP V++AC + + R G
Sbjct: 101 NVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRV----G 156
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
VH+ ++++G N+ I N L+ MY K G + ++ K+ D++ ++ +SWN M +G+A +
Sbjct: 157 LQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQS 216
Query: 216 FDCDGALELFKRME----------LEGLEP-----------------------NFVTWTS 242
D ALE+ K M+ + L P N ++W
Sbjct: 217 GQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNV 276
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
+++ + E + LF M + G++ A IA +L C DL+A +G+ +H ++ KG
Sbjct: 277 MIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGN 336
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
+ ++NAL+ +Y K G ++ A+++F ++ +++VSW +++++Y +G +AV +F+
Sbjct: 337 LRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFA 396
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
++ LD G + P+ I++ +V+ A + G ++ FR M
Sbjct: 397 KM--LDSG--QNPDSIAFVSVLSACSHTGLLDQGRHYFRMM 433
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 158/340 (46%), Gaps = 26/340 (7%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
FD L+ CK + L H+ A A L+ V Y + N+FE
Sbjct: 219 FDDALEICKEMDSLNLNHD------AGTMASLSPVV--CYTSLENVQYIHNMFERMT--- 267
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K + + WN ++ + V+N + A+ L+++M + G+ D T ++ AC G F
Sbjct: 268 KKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPAC---GDLSALF- 323
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H ++ + + N+ + N L+ MYAK G + ++ +FDK+R+++ +SW M S +
Sbjct: 324 LGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYG 383
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGA 272
+ A+ LF +M G P+ + + S+LS+ + G L++ F MM ++ GI
Sbjct: 384 RSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRI 443
Query: 273 EAIAVVLSVCADLAADHMGKV--IHGFVIKGGFEDYVFVKNALICVYGKHGDVK---VAQ 327
E A ++ + G+V + F+ + E V AL+ H + VA
Sbjct: 444 EHFACMVDLFG-----RAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSKMDIGLVAA 498
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
+L ++ K + L YA+AG+ + + V ++K+
Sbjct: 499 DLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKI 538
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L+ Y G +F++ +K+++ +N MI Y N L AL+ F+ M+ F PD
Sbjct: 77 LMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPD 136
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
F VL ACS + G ++ D +V+ ++ + +V + G+ G L+EA ++
Sbjct: 137 HYTFPCVLKACSGLDNLRVGLQVHDAIVK-VGLDTNLFIGNALVAMYGKCGCLREARKVL 195
Query: 573 KNMPMEPNAYVWGTLL 588
MP + W +++
Sbjct: 196 DQMPYR-DVVSWNSMV 210
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 205/653 (31%), Positives = 349/653 (53%), Gaps = 32/653 (4%)
Query: 14 PSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIY 73
PSN + +++ + + +L C + KQ+H I +G NA F+ ++L +Y
Sbjct: 34 PSNLNPHLTLLYHEPPSSTTYASILDSCGSPILGKQLHAHSIKSGFNAHEFVTTKLLQMY 93
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG--D 131
AR +A +VF+T P S W ++LRV + G +E A L+ ++ GV D
Sbjct: 94 ARNCSFENACHVFDTMPLRNLHS---WTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLD 150
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
F FP+V++ C + + G+ +H L+ G M +F
Sbjct: 151 FFVFPVVLKICCGLCAVE----LGRQMHGMALKHD------------------GDMKSAF 188
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
++F + K+ S+N M +G+ N + A ELF RME EG++ + ++W S++S +
Sbjct: 189 EMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGS 248
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
+E LF + K GIE + + VL+ CAD+A+ GK H I G + V
Sbjct: 249 LFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGG 308
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
AL+ +Y K D+ AQ F + E+++ +WNALI+ YA C++A ++ +K+
Sbjct: 309 ALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYAR---CNQAEKIRELHQKMRRDG 365
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
E PNV +W+ +I + N + + A+ LF +MQ+A + + T+ +L+ C+ A + G
Sbjct: 366 FE-PNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRG 424
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
+++H + +R + ++ + L++MY KCG ++ + V+ I +L++ N+M++ Y M+
Sbjct: 425 KQVHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMH 484
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G GE +A F M+ + +PD V F+AVLS+C HAG + G +MV + + P ++H
Sbjct: 485 GHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHECLALMV-AYNVMPSLKH 543
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
Y CMVDLL RAG L EA +++KN+P E +A W LL C +H D+ E A ++ L
Sbjct: 544 YTCMVDLLSRAGQLYEAYELIKNLPTEADAVTWNALLGGCFIHNEVDLGEIAAEKLIELE 603
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
G+Y++L+N+YA++G+W + R K G++K G SWIE + IH+F
Sbjct: 604 PNNPGNYVMLANLYASAGKWHYLTQTRQLMKDMGMQKRPGCSWIEDRDGIHVF 656
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 242/812 (29%), Positives = 392/812 (48%), Gaps = 139/812 (17%)
Query: 16 NPSRPFSIITYNN-SLLDCFDHLLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLS 71
N +P +N+ SL +LQ C + Q +Q H Q++V G + L ++L
Sbjct: 30 NIGKPLQFSIHNDDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLG 89
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+Y G DA+N+F C WN ++R G ++ AL Y KM G L D
Sbjct: 90 MYVLCGAFLDAKNIFYQLRLWCSEP---WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPD 146
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
+TFP VI+AC + S + G++VH+ + MGF+ +V + + LI Y++ G + D+
Sbjct: 147 KYTFPYVIKACGGLNS----VALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDAR 202
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT---------- 241
LFD++ K+ + WN+M +G+ N D D A +F M PN VT+
Sbjct: 203 YLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEI 262
Query: 242 -------------------------SLLSSHARCGRLEETMDLFDMMRKRGI-------- 268
+LL+ +A+CG L + LFDMM K +
Sbjct: 263 MINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMIS 322
Query: 269 -----------------------EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
+ + + L + ++ A GK IH ++I+ G
Sbjct: 323 GYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSL 382
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL- 364
VF+K+ALI +Y K DV++A+ +F + +IV A+I+ Y G+ + A+E+F L
Sbjct: 383 DVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLL 442
Query: 365 -EKLDGGSMERPNVISWSAVIGAFA----------SNGRGEEA---------------LD 398
E++ S+ +V+ A + A NG G LD
Sbjct: 443 QERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLD 502
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAE--------------------------SAA----- 427
L + + ++V + +++ C++ SAA
Sbjct: 503 LAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACA 562
Query: 428 ----LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
L+ G+EIH ++R + ++ ++ L++MY KCG L+ VF+ +E+K+ ++WNS
Sbjct: 563 NLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNS 622
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
+I+ YG +G +++L F M+ G +PD V F+A++SAC HAG V+EG F M E
Sbjct: 623 IIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEEL 682
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
I +MEHYACMVDL GRAG L EA ++ +MP P+A VWGTLL +CR+H N ++AE
Sbjct: 683 GIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVA 742
Query: 604 ASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHM 663
+ +F L + +G Y+LLSN++A +G+WE K+R K +G++KV G SWI+V HM
Sbjct: 743 SRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHM 802
Query: 664 FSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
F + + + +L+ L L++ +G VP
Sbjct: 803 FVAADRSHPQSSQIYLLLKNLFLELRKEGYVP 834
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 211/639 (33%), Positives = 352/639 (55%), Gaps = 60/639 (9%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
F L A +VFET P + + L+WN + R + + +ALKLYV M LG+L + F
Sbjct: 20 PHFDGLPYAISVFETIP---EPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFF 76
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
TFP ++++C +F+ GQ +H HVL++GF ++++ LI MYA+ G++ D+ K+
Sbjct: 77 TFPFLLKSCAKSKTFKE----GQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKV 132
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FD+ ++ +S+ + +G+A + A ++F + ++ + V+W +++S +A G
Sbjct: 133 FDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIK----DVVSWNAMISGYAETGNY 188
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
++ ++LF M K ++ +A V+S CA + +G+ +H ++ GF + + NAL
Sbjct: 189 KKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNAL 248
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
I +Y K G EV + E L+G +
Sbjct: 249 IDLYSKCG-------------------------------------EVETACELLEG--LS 269
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
+VISW+ +IG + +EAL LF++M + N VT+ +L CA A++IGR
Sbjct: 270 NKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 329
Query: 434 IHGHVVRVSMNKNILVQNG------LLNMYMKCGCLEEGHLVFEQIE-KKDLITWNSMIS 486
IH ++ + K ++V N L++MY KCG ++ V + + L TWN+MI
Sbjct: 330 IHVYIDKKL--KGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIF 387
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
G+ M+G A F M + G +PD + FV +LSACSH+G+++ GR IF M +++ I
Sbjct: 388 GFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNIT 447
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
P++EHY CM+DLLG +GL +EA +++ MPMEP+ +W +LL +C++H N ++ E+ A +
Sbjct: 448 PKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKK 507
Query: 607 IFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL-KKVAGQSWIEVKRKIHMFS 665
+ + E GSY+LLSNIYA +G+W + K+R KG+ KKV G S IE+ +H F
Sbjct: 508 LIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFI 567
Query: 666 SGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G+ L + + +LEE+ + +E G VPD +L EM
Sbjct: 568 IGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEM 606
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 148/581 (25%), Positives = 233/581 (40%), Gaps = 163/581 (28%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F LL+ C KT + +Q+H ++ G + ++ ++S+YA+ GRL DA+ VF+ +
Sbjct: 78 FPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSS 137
Query: 91 F-DCKSSSLL---------------------------WNSILRVNVSNGLYENALKLYVK 122
D S + L WN+++ G Y+ AL+L+ +
Sbjct: 138 HRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKE 197
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M K V D T V+ AC GS G+ VH+ + GF N+ IVN LI +Y+
Sbjct: 198 MMKTNVKPDESTMATVVSACAQSGSIE----LGRQVHSWINDHGFGSNLKIVNALIDLYS 253
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K G++ + +L + + K+ ISWN + G+ AL LF+ M G PN VT S
Sbjct: 254 KCGEVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 313
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV---I 299
+L CA L A +G+ IH ++ +
Sbjct: 314 -----------------------------------ILPACAHLGAIDIGRWIHVYIDKKL 338
Query: 300 KGGFEDYVFVKNA------LICVYGKHGDVKVAQNLF-SEIEEKNIVSWNALITSYAEAG 352
KG V V NA LI +Y K GD+ A + S +++ +WNA+I +A G
Sbjct: 339 KG-----VVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHG 393
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+ A ++FS++ K NG + +
Sbjct: 394 RANAAFDIFSRMRK-----------------------NG----------------IEPDD 414
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
+T GLLS C+ S L++GR I SM ++ + L + GC
Sbjct: 415 ITFVGLLSACSHSGMLDLGRNIFR-----SMRQDYNITPKLEHY----GC---------- 455
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEA-GFKPDGVAFVAVLSACSHAGLVNE 531
MI G +GL + A EEMI +PDGV + ++L AC G +
Sbjct: 456 -----------MIDLLGHSGLFKEA----EEMINTMPMEPDGVIWCSLLKACKIHGNLEL 500
Query: 532 GRRIFDMMVREFRIEPQME-HYACMVDLLGRAGLLQEASDI 571
G ++ +IEP+ Y + ++ AG E I
Sbjct: 501 GESFAKKLI---KIEPENPGSYVLLSNIYATAGKWNEVXKI 538
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 216/673 (32%), Positives = 348/673 (51%), Gaps = 86/673 (12%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARF--GRLFDARNVFETAPFDCKS 95
L++C T+ QLKQ+H Q++ T F A+++++ A G L AR VF P
Sbjct: 47 LEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIP---NP 103
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
++ NSI+R + L A+ Y M G+ D FTFP + ++C + G
Sbjct: 104 TTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE-------G 156
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ +H H ++GF + +I N L+ MY+ G + + K+FDK+ K+ +SW M +A
Sbjct: 157 KQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQW 216
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
A++LF+RME+ ++PN +T ++L++ AR LE
Sbjct: 217 DLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLE--------------------- 255
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
K +H ++ + G + + +AL+ VY K G +A++LF+++ E
Sbjct: 256 --------------TAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPE 301
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
KN+ WN +I + E +EA
Sbjct: 302 KNLFCWNIMINGHVEDSDYEEA-------------------------------------- 323
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
L LF +MQL+ V + VT++ LL C AL +G+ +H ++ + + ++ + L++
Sbjct: 324 -LSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVD 382
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY KCG +E VF+++ +KD++TW ++I G M G G AL F EM + KPD +
Sbjct: 383 MYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAIT 442
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
FV VL+ACSHAGLVNEG F+ M ++ I+P +EHY CMVD+LGRAG + EA D+++NM
Sbjct: 443 FVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNM 502
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
PM P+ +V LL++CR+H N VAE A Q+ L + G+Y+LLSNIY++ WE A
Sbjct: 503 PMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAK 562
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
K+R + +KK G S IEV +H F G+ + E L+++ ++++ G VP
Sbjct: 563 KMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVP 622
Query: 696 DNDIILWEMMGKK 708
D +L++M K+
Sbjct: 623 DKSEVLFDMDEKE 635
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 137/558 (24%), Positives = 233/558 (41%), Gaps = 85/558 (15%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F L + C + + KQ+H G + A++ ++++Y+ G L AR VF+
Sbjct: 143 FPSLFKSCGVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKM---V 199
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR-F 152
S + W +++ L A+KL+ +M V + T V+ AC R R
Sbjct: 200 NKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACA-----RSRDL 254
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
+ VH ++ + G + + + L+ +Y K G + LF+K+ KN WN+M +G
Sbjct: 255 ETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGH 314
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
+ D + AL LF M+L G++ + VT SLL +
Sbjct: 315 VEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIA-------------------------- 348
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
C L A +GK +H ++ K E V + AL+ +Y K G ++ A +F E
Sbjct: 349 ---------CTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQE 399
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ EK++++W ALI A G +A+E+F +++ S +P+ I++ V+ A + G
Sbjct: 400 MPEKDVMTWTALIVGLAMCGQGLKALELFHEMQM----SEVKPDAITFVGVLAACSHAGL 455
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR--EIHGHVVRVSMNKNILVQ 450
E + F M + S+ G C GR E + + M + V
Sbjct: 456 VNEGIAYFNSMPNKYGIQPSIEHYG----CMVDMLGRAGRIAEAEDLIQNMPMAPDYFVL 511
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG--------YGMNGLGENALATFE 502
GLL+ C G+LV + + LI + G Y E A E
Sbjct: 512 VGLLS-----ACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRE 566
Query: 503 EMIEAGF-KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ-MEHYACMVDLLG 560
M+E KP G + + V G+V+E V+ PQ E Y + D++
Sbjct: 567 LMVERNIKKPPGCSAIEV------GGVVHE-------FVKGDVSHPQSSEIYETLDDMMR 613
Query: 561 R---AGLLQEASDIVKNM 575
R AG + + S+++ +M
Sbjct: 614 RLKSAGYVPDKSEVLFDM 631
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 234/773 (30%), Positives = 374/773 (48%), Gaps = 129/773 (16%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQVH Q I G + ++ +Y + + D VF+ + + W S+L
Sbjct: 112 KQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRV---KNVVSWTSLLAGY 168
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
NGL E ALKL+ +M+ G+ + FTF V+ G+ G VH V++ G
Sbjct: 169 RQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEK----GVQVHTMVIKSGL 224
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ + N ++ MY+K +SD+ +FD + +N +SWN M +GF N A ELF R
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284
Query: 228 MELEGL------------------EPNFVTW-----------------TSLLSSHARCGR 252
M LEG+ E +F T+L+ ++++C
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344
Query: 253 LEE--------------------------------TMDLFDMMRKRGIEVGAEAIAVVLS 280
+++ M+LF MR+ G+ + +L+
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILT 404
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
A ++ IH V+K +E+ V AL Y K GD A +F I+EK+IV+
Sbjct: 405 ANAAVSPSQ----IHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVA 460
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
W+A+++ YA+ G + AV++F QL K PN ++S+V+ A A
Sbjct: 461 WSAMLSGYAQMGDIEGAVKIFLQLAK----EGVEPNEFTFSSVLNACA------------ 504
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
A +A++ G++ H ++ + + V + L+ MY K
Sbjct: 505 ----------------------APTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKR 542
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
G +E + VF++ +DL++WNSMISGY +G G+ +L FEEM + DG+ F+ V+
Sbjct: 543 GNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVI 602
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
SAC+HAGLVNEG+R FD+MV+++ I P MEHY+CMVDL RAG+L++A D++ MP
Sbjct: 603 SACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAG 662
Query: 581 AYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRIS 640
A +W TLL +CR+H N + E A ++ L + + +Y+LLSNIYA +G W++ AKVR
Sbjct: 663 ATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKL 722
Query: 641 AKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
K +KK AG SWIEVK K F +G+ + LEEL++++++ G PD +
Sbjct: 723 MDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYV 782
Query: 701 LWEMMGKKNVKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRSTNGQLMKN 753
L + ++ + I S+H L + L+ + T Q++KN
Sbjct: 783 LHD---------VEEEHKEVILSQHS----ERLAIAFGLIATPPGTPIQIVKN 822
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 135/562 (24%), Positives = 252/562 (44%), Gaps = 107/562 (19%)
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
N + AL L++ +R+ G DG + V++ C + F G+ VH ++ GF
Sbjct: 70 NDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCL----FDRIVGKQVHCQCIKCGFVE 125
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
+V + L+ MY K + D ++FD++RVKN +SW + +G+ N + AL+LF +M+
Sbjct: 126 DVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQ 185
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
LEG++PN T+ ++L A G +E +G++V
Sbjct: 186 LEGIKPNPFTFAAVLGGLAADGAVE-----------KGVQV------------------- 215
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
H VIK G + +FV N+++ +Y K V A+ +F +E +N VSWN++I +
Sbjct: 216 -----HTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFV 270
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMER----------PNVISWS------------------ 381
GL EA E+F ++ +L+G + + N+ S
Sbjct: 271 TNGLDLEAFELFYRM-RLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDL 329
Query: 382 ----AVIGAFASNGRGEEALDLFRKMQ-LAKVVANSVTISGLLSVCAESAALNI------ 430
A++ A++ ++A LF M + VV+ + ISG + A+N+
Sbjct: 330 NIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRR 389
Query: 431 ---------------------GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
+IH VV+ + + V L + Y K G E +
Sbjct: 390 EGVRPNHFTYSTILTANAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKI 449
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC-SHAGL 528
FE I++KD++ W++M+SGY G E A+ F ++ + G +P+ F +VL+AC +
Sbjct: 450 FELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTAS 509
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
V +G++ ++ + + +V + + G ++ A+++ K ++ + W +++
Sbjct: 510 VEQGKQFHSCSIKS-GFSNALCVSSALVTMYAKRGNIESANEVFKRQ-VDRDLVSWNSMI 567
Query: 589 NSCRMH----KNTDVAEAMASQ 606
+ H K+ + E M S+
Sbjct: 568 SGYAQHGCGKKSLKIFEEMRSK 589
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/424 (22%), Positives = 198/424 (46%), Gaps = 82/424 (19%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +++ C I ++ KQ+H Q+I G++ + ++ Y++ + DA +F
Sbjct: 297 FATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF--CM 354
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + W +I+ V NG + A+ L+ +MR+ GV + FT+ ++ A + +
Sbjct: 355 MHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVSPSQ- 413
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+H V++ ++ + + L Y+K+G +++ K+F+ + K+ ++W+ M S
Sbjct: 414 -------IHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLS 466
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
G+A D +GA+++F ++ EG+EPN T++S+L++ A
Sbjct: 467 GYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACA---------------------- 504
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
A A+ GK H IK GF + + V +AL+ +Y K G+++ A +F
Sbjct: 505 ------------APTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVF 552
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE----KLDGGSM-------------- 372
++++VSWN++I+ YA+ G +++++F ++ +LDG +
Sbjct: 553 KRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVN 612
Query: 373 --ER------------PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
+R P + +S ++ ++ G E+A+DL KM A + L
Sbjct: 613 EGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFP---AGATIWRTL 669
Query: 419 LSVC 422
L+ C
Sbjct: 670 LAAC 673
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 138/303 (45%), Gaps = 43/303 (14%)
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC 282
+LF +GL N LL +R + +E ++LF +R+ G +++ VL VC
Sbjct: 47 QLFDETPQQGLSRN----NHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVC 102
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
L +GK +H IK GF + V V +L+ +Y K V+ + +F E+ KN
Sbjct: 103 GCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKN----- 157
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
V+SW++++ + NG E+AL LF +
Sbjct: 158 ----------------------------------VVSWTSLLAGYRQNGLNEQALKLFSQ 183
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
MQL + N T + +L A A+ G ++H V++ ++ I V N ++NMY K
Sbjct: 184 MQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLM 243
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
+ + VF+ +E ++ ++WNSMI+G+ NGL A F M G K F V+
Sbjct: 244 VSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKL 303
Query: 523 CSH 525
C++
Sbjct: 304 CAN 306
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 112/202 (55%), Gaps = 2/202 (0%)
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
F+ N + +EAL+LF ++ + + ++S +L VC +G+++H ++ ++
Sbjct: 67 FSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVED 126
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+ V L++MYMK +E+G VF+++ K++++W S+++GY NGL E AL F +M
Sbjct: 127 VSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQL 186
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
G KP+ F AVL + G V +G ++ M+++ ++ + MV++ ++ ++
Sbjct: 187 EGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKS-GLDSTIFVGNSMVNMYSKSLMVS 245
Query: 567 EASDIVKNMPMEPNAYVWGTLL 588
+A + +M NA W +++
Sbjct: 246 DAKAVFDSME-NRNAVSWNSMI 266
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 214/708 (30%), Positives = 363/708 (51%), Gaps = 68/708 (9%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP----------FDCKSSS 97
+ VH ++ +G + F+ R+++IY + + AR +F+ P SSS
Sbjct: 25 RAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSS 84
Query: 98 --------------------LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPL 137
+ +N+++ AL L+V+M++ G L D FTF
Sbjct: 85 GNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSS 144
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA--------KMGQ-MS 188
V+ A + Q++H V+++G + N L+ Y K Q M+
Sbjct: 145 VLSALSLIADEE---RHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMA 201
Query: 189 DSFKLFDKVRVKNYI---SWNMMFSGFALNFDCDGALELFKRMELEGLE-PNFVTWTSLL 244
+ K+FD+ KN I SW M +G+ N D A EL L+GL P V W +++
Sbjct: 202 SARKVFDETP-KNQIYEPSWTTMIAGYVRNDDLVAAREL-----LDGLTYPIDVAWNAMI 255
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD----LAADHMGKVIHGFVIK 300
S + R G EE D F M GI+ ++S C + + G+ +HG++++
Sbjct: 256 SGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILR 315
Query: 301 GGFED----YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
E + V NALI Y K+ + A+ +F ++ ++I+SWNA+++ Y A +E
Sbjct: 316 TVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEE 375
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
A +FS+ M NV++W+ +I A NG GEE L LF +M+ + +
Sbjct: 376 ANSIFSE--------MPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFA 427
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
G ++ C+ +L+ G++IH V+R+ + + N L+ MY +CG +E VF +
Sbjct: 428 GAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYV 487
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D ++WN+MI+ +G G A+ FE+M++ PD + F+ +L+AC+HAGL+ EGR F
Sbjct: 488 DSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYF 547
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
D M + I P +HYA ++DLL RAG+ +A ++K+MP E A +W LL CR+H N
Sbjct: 548 DTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGN 607
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
++ A ++ LI G+Y++LSN+YAA G+W++ A+VR+ + +G+KK G SW+E
Sbjct: 608 MELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVE 667
Query: 657 VKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
V+ +H+F ++ +++ V L++L +M+ G VPD +L +M
Sbjct: 668 VENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDM 715
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 179/414 (43%), Gaps = 70/414 (16%)
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+ + +H ++ GF+ F+ N LI +Y K ++ A+ LF +I + +IV+ L+++Y+
Sbjct: 23 IARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYS 82
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+G A ++F + + + +S++A+I A++ G AL+LF +M+ +
Sbjct: 83 SSGNVKLAQQLF------NATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFL 136
Query: 410 ANSVTISGLLSVCAESAALNIGRE---IHGHVVRVSMNKNILVQNGLLNMYMKCGC---- 462
+ T S +LS A S + R +H V+++ V N LL+ Y+ C
Sbjct: 137 PDPFTFSSVLS--ALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLV 194
Query: 463 -----LEEGHLVFEQIEKKDL---------------------------------ITWNSM 484
+ VF++ K + + WN+M
Sbjct: 195 KSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAM 254
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA----GLVNEGRRIFDMMV 540
ISGY GL E A TF M G + D + +++SAC G+ N GR++ ++
Sbjct: 255 ISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYIL 314
Query: 541 REFRIEPQMEHYA-----CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
R +EP H+ ++ + + EA + MP+ + W +L+ +
Sbjct: 315 RTV-VEPS-HHFVLSVNNALITFYTKYDRMIEARRVFDKMPVR-DIISWNAVLSG---YV 368
Query: 596 NTDVAEAMASQIFGLITE-TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
N E A+ IF + E ++ ++ + A +G E+ K+ K++GL+
Sbjct: 369 NAQRIEE-ANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEP 421
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 363 bits (932), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/625 (33%), Positives = 334/625 (53%), Gaps = 87/625 (13%)
Query: 76 FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
F R D +VF WNS++ +G AL+ + MRKL + +F
Sbjct: 32 FNRYVDKTDVFS------------WNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSF 79
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
P I+AC + FS G+ H G+Q ++ + + LI MY+ G++ D+ K+FD
Sbjct: 80 PCAIKACSSLLDI---FS-GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFD 135
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ +N +SW M G+ LN + A+ LFK + +E + +
Sbjct: 136 EIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDD------------------DA 177
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
TM L M + V+S C+ +AA + + IH FVIK GF+ V V N L+
Sbjct: 178 TMFLDSM-----------GMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLD 226
Query: 316 VYGKHGD--VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
Y K G+ V VA+ +F +I +K+ VS+N++++
Sbjct: 227 AYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMS--------------------------- 259
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA-NSVTISGLLSVCAESAALNIGR 432
+A +G EA D+FR++ KVV N +T+S +L + S AL IG+
Sbjct: 260 ------------VYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGK 307
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
IH V+R+ + +++V +++MY KCG +E L F++++ K++ +W +MI+GYGM+G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHG 367
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
AL F MI++G +P+ + FV+VL+ACSHAGL + G F+ M F +EP +EHY
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHY 427
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
CMVDLLGRAG LQ+A D+++ M MEP++ +W +LL +CR+HKN ++AE +++F L
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDP 487
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
G YMLLS+IYA SGRW+D +VR++ K +GL K G S +E+ ++H+F G+
Sbjct: 488 SNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHP 547
Query: 673 DLKNVCEVLEELALQMENKGCVPDN 697
+ + E L EL ++ G V +
Sbjct: 548 QREKIYEFLAELNRKLLEAGYVSNT 572
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 182/400 (45%), Gaps = 67/400 (16%)
Query: 14 PSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIY 73
P+ S P +I +SLLD F KQ H Q V G + F+++ ++ +Y
Sbjct: 74 PTRSSFPCAI-KACSSLLDIFSG-----------KQTHQQAFVFGYQSDIFVSSALIVMY 121
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM------RKLG 127
+ G+L DAR VF+ P K + + W S++R NG +A+ L+ +
Sbjct: 122 STCGKLEDARKVFDEIP---KRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDAT 178
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ- 186
+ D VI AC + + + +H+ V++ GF V + N L+ YAK G+
Sbjct: 179 MFLDSMGMVSVISACSRVAA----KGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEG 234
Query: 187 -MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP-NFVTWTSLL 244
++ + K+FD++ K+ +S+N + S +A + + A ++F+R+ E + N +T +++L
Sbjct: 235 GVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVL 294
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
+ + G L + D + + G+E
Sbjct: 295 LAVSHSGALRIGKCIHDQVIRMGLE----------------------------------- 319
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
D V V ++I +Y K G V+ A+ F ++ KN+ SW A+I Y G +A+E+F +
Sbjct: 320 DDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM 379
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+D G RPN I++ +V+ A + G + F M+
Sbjct: 380 --IDSGV--RPNYITFVSVLAACSHAGLHDVGWHWFNAMK 415
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 151/313 (48%), Gaps = 19/313 (6%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGR--LFDARNVFETAPFDCKSSSLLWNSILR 105
+ +H+ +I G + + +L YA+ G + AR +F+ + +NSI+
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI---VDKDRVSYNSIMS 259
Query: 106 VNVSNGLYENALKLYVKMRKLGVLG-DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
V +G+ A ++ ++ K V+ + T V+ A G+ R G+ +H+ V++
Sbjct: 260 VYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRI----GKCIHDQVIR 315
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
MG + +V + +I MY K G++ + FD+++ KN SW M +G+ ++ ALEL
Sbjct: 316 MGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALEL 375
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCA 283
F M G+ PN++T+ S+L++ + G + F+ M+ R G+E G E ++ +
Sbjct: 376 FPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDL-- 433
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ----NLFSEIEEKNIV 339
L + + + K E + ++L+ H +V++A+ LF E++ N
Sbjct: 434 -LGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLF-ELDPSNCG 491
Query: 340 SWNALITSYAEAG 352
+ L YA++G
Sbjct: 492 YYMLLSHIYADSG 504
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/677 (31%), Positives = 354/677 (52%), Gaps = 85/677 (12%)
Query: 32 DCFDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
D F LLQ+C +++ Q ++VH ++ +G + +L +LS+YA+ G L DAR VF++
Sbjct: 48 DVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDS 107
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
+ + W +++ V+ A K Y M+ G D TF ++ A F
Sbjct: 108 IR---DRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNA--FTNPE 162
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
+ GQ VH +++ G + + L+GMYAK G +S + +FD++
Sbjct: 163 LLQL--GQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLP---------- 210
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
E N VTWT L++ +A+ G+++ ++L + M++ +
Sbjct: 211 -------------------------EKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEV 245
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
A +L C AA GK +H ++I+ G+ ++V N+LI
Sbjct: 246 APNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLI-------------- 291
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
T Y + G +EA ++FS L D V++W+A++ +A
Sbjct: 292 -----------------TMYCKCGGLEEARKLFSDLPHRD--------VVTWTAMVTGYA 326
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
G +EA++LFR+MQ + + +T + +L+ C+ A L G+ IH +V N ++
Sbjct: 327 QLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVY 386
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY-GMNGLGENALATFEEMIEA 507
+Q+ L++MY KCG +++ LVF Q+ +++++ W ++I+G +G AL F++M +
Sbjct: 387 LQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQ 446
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
G KPD V F +VLSAC+H GLV EGR+ F M ++ I+P +EHY+C VDLLGRAG L+E
Sbjct: 447 GIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEE 506
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A +++ +MP P VWG LL++CR+H + + E A + L + G+Y+ LS+IYAA
Sbjct: 507 AENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAA 566
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
+GR+EDA KVR + + + K GQSWIEV K+H+F + + + + L +L Q
Sbjct: 567 AGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQ 626
Query: 688 MENKGCVPDNDIILWEM 704
++ G VPD +L ++
Sbjct: 627 IKEMGYVPDTRFVLHDV 643
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 192/406 (47%), Gaps = 66/406 (16%)
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ GRL+E + + + M +G V ++ +L CA L + G+ +H ++K G + +
Sbjct: 24 KTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 83
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA------EAGLCDEA----- 357
++N L+ +Y K G + A+ +F I ++NIVSW A+I ++ EA C E
Sbjct: 84 LENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAG 143
Query: 358 -------------------------------VEVFSQLEKLDG----------GSMERPN 376
VE +LE G G + +
Sbjct: 144 CKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKAR 203
Query: 377 VI----------SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
VI +W+ +I +A G+ + AL+L MQ A+V N +T + +L C A
Sbjct: 204 VIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPA 263
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
AL G+++H ++++ + + V N L+ MY KCG LEE +F + +D++TW +M++
Sbjct: 264 ALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVT 323
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRI 545
GY G + A+ F M + G KPD + F +VL++CS + EG+RI +V + +
Sbjct: 324 GYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNL 383
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
+ ++ + +V + + G + +AS +V N E N W ++ C
Sbjct: 384 DVYLQ--SALVSMYAKCGSMDDAS-LVFNQMSERNVVAWTAIITGC 426
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
+ GR +EAL + M L S GLL CA +L GRE+H +++ +
Sbjct: 19 VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
N ++N LL+MY KCG L + VF+ I +++++W +MI + A +E
Sbjct: 79 QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHYACMVDLLGRA 562
M AG KPD V FV++L+A ++ L+ G+++ +V +EP++ +V + +
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVG--TSLVGMYAKC 196
Query: 563 GLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
G + +A I +P E N W L+ DVA
Sbjct: 197 GDISKARVIFDRLP-EKNVVTWTLLIAGYAQQGQVDVA 233
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 193/657 (29%), Positives = 354/657 (53%), Gaps = 50/657 (7%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
HLL QC ++ +LK VH Q+I+ G A ++LS+ + G L A +F+ P +
Sbjct: 44 HLLDQCSSMKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIP---QP 100
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ ++N ++R ++ +L L+ +M G + + FTFP V++AC + + +
Sbjct: 101 NKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKAC----AAKPFYWEA 156
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
IVH +++G + + N ++ Y + + ++FD + + +SWN
Sbjct: 157 VIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWN--------- 207
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
S+++ +++ G +E + LF M + G+E +
Sbjct: 208 --------------------------SMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTL 241
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
+LS + +G+ +H +++ G E V NALI +Y K G ++ A+++F ++ +
Sbjct: 242 VSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLD 301
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
K++VSW +++ +YA GL + AV++F+ M NV+SW+++I G+ E
Sbjct: 302 KDVVSWTSMVNAYANQGLVENAVQIFNH--------MPVKNVVSWNSIICCLVQEGQYTE 353
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
A++LF +M ++ V+ + T+ +LS C+ + L +G++ H ++ + ++ + N L++
Sbjct: 354 AVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLID 413
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY KCG L+ +F + +K++++WN +I ++G GE A+ F+ M +G PD +
Sbjct: 414 MYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEIT 473
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
F +LSACSH+GLV+ GR FD+M+ FRI P +EHYACMVDLLGR G L EA +++ M
Sbjct: 474 FTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKM 533
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
P++P+ VWG LL +CR++ N ++A+ + Q+ L +G Y+LLSN+Y+ S RW+D
Sbjct: 534 PVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMK 593
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
K+R G+KK S+IE+ + F + + +L++L +++ G
Sbjct: 594 KIRKIMDDSGIKKCRAISFIEIDGCCYQFMVDDKRHCASTGIYSILDQLMDHLKSVG 650
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 155/347 (44%), Gaps = 52/347 (14%)
Query: 22 SIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFD 81
SI+T N+L+D + +C + K V +Q++ + +++ YA G + +
Sbjct: 273 SIVT--NALIDMY----AKCGHLQFAKHVFDQML----DKDVVSWTSMVNAYANQGLVEN 322
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
A +F P + + WNSI+ V G Y A++L+ +M GV+ D T ++
Sbjct: 323 AVQIFNHMPV---KNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSC 379
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C G + G+ H ++ +V + N LI MYAK G + + +F + KN
Sbjct: 380 CSNTGDL----ALGKQAHCYICDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKN 435
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
+SWN++ AL+ + A+E+FK M+ GL P+ +T+T LLS+ + G ++ FD
Sbjct: 436 VVSWNVIIGALALHGFGEEAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFD 495
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
+M I F I G E Y + + L G+ G
Sbjct: 496 IM------------------------------ISTFRISPGVEHYACMVDLL----GRGG 521
Query: 322 DVKVAQNLFSEIEEK-NIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
+ A L ++ K ++V W AL+ + G + A ++ QL +L
Sbjct: 522 FLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLEL 568
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 211/662 (31%), Positives = 342/662 (51%), Gaps = 87/662 (13%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYA--RFGRLFDARNVFETAPFDCKSSSLLWNSI 103
QLKQ+H Q++ TG F A+++++ + G L AR VF P +S NSI
Sbjct: 3 QLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIP---NPTSYTCNSI 59
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
+R L++ AL Y +M G++ D +TFP + ++C+ S G+ +H H
Sbjct: 60 IRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCR-------NSSEGKQIHCHST 112
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
++GF + + N L+ MY+ G + + K+FDK+ K +S
Sbjct: 113 KLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVS------------------- 153
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVC 282
W +++ HA+ + E + LFD MM+ ++ + VL+ C
Sbjct: 154 ----------------WATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTAC 197
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
A M K IH ++ + GF +V + L+ VY K G V++A++LF + +EKN+
Sbjct: 198 ARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNL---- 253
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
SW+ +I + EEAL LFR+
Sbjct: 254 -----------------------------------FSWNIMINGHVEDSNYEEALLLFRE 278
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
MQ + + VT++ LL C AL +G+ +H ++ + ++ ++ + L++MY KCG
Sbjct: 279 MQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGS 338
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
+E VF ++ +KD++TW ++I G M G ENAL F+EM G KPD + FV VL+A
Sbjct: 339 IETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAA 398
Query: 523 CSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAY 582
CSHAG V+EG F+ M + I+P +EHY +VD+LGRAG + EA +++K+MPM P+ +
Sbjct: 399 CSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQF 458
Query: 583 VWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAK 642
V G LL +CR+H N + AE A Q+ + +G+Y+LLSNIY +S +WE+A + R
Sbjct: 459 VLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMA 518
Query: 643 TKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILW 702
+G++K G S IEV +H F G+S + E+LE++ +++N G VPD +L+
Sbjct: 519 ERGMRKPPGCSQIEVHGVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLF 578
Query: 703 EM 704
+M
Sbjct: 579 DM 580
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 131/557 (23%), Positives = 240/557 (43%), Gaps = 76/557 (13%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F L + C+ + KQ+H G + + ++++Y+ G L AR VF+
Sbjct: 91 FPSLFKSCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKME--- 147
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKL-GVLGDGFTFPLVIRACKFMGSFRFR- 151
+ + W +++ V+ A++L+ +M K V + T V+ AC R R
Sbjct: 148 DKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACA-----RARD 202
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
+ + +H ++ + GF +V + L+ +Y K G + + LFDK + KN SWN+M +G
Sbjct: 203 LAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMING 262
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+ + + AL LF+ M+ +G++ + VT SLL +
Sbjct: 263 HVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLA------------------------- 297
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
C L A +GK +H ++ K + V + AL+ +Y K G ++ A +F
Sbjct: 298 ----------CTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFH 347
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
E+ EK++++W ALI A G + A++ F ++ + G +P+ I++ V+ A + G
Sbjct: 348 EMPEKDVMTWTALILGLAMCGQAENALQYFDEMH-IKG---VKPDAITFVGVLAACSHAG 403
Query: 392 RGEEALDLFRKMQLAKVVANSVT-ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
+E + F M + ++ GL+ + + + E+ + + M + V
Sbjct: 404 FVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEEL---IKSMPMAPDQFVL 460
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG--------YGMNGLGENALATFE 502
GLL C G+L + K L+ + SG Y + E A T E
Sbjct: 461 GGLLG-----ACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRE 515
Query: 503 EMIEAGF-KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
M E G KP G + + V G+V+E + + I +E M+ L
Sbjct: 516 LMAERGMRKPPGCSQIEV------HGVVHEFVKGDSSHRQSSEINEMLED---MISKLKN 566
Query: 562 AGLLQEASDIVKNMPME 578
AG + + S+++ +M E
Sbjct: 567 AGYVPDKSEVLFDMAEE 583
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 211/744 (28%), Positives = 361/744 (48%), Gaps = 84/744 (11%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
+T+ L C C + + + +H ++ + + ++S+Y + L DAR
Sbjct: 8 VTFLTVLCSC-----SSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDAR 62
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
+VFE+ + + + + WN+++ NG AL LY +M G+ D TF V+ AC
Sbjct: 63 SVFESMDWR-QRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACS 121
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
+ G+ +HN V G + N L+ MYA+ G + D+ ++F ++ ++
Sbjct: 122 SLAQ-------GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDET 174
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELE-------------------------------- 231
SWN + + + D GAL +FK M+ +
Sbjct: 175 SWNAVILAHSQSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIV 234
Query: 232 --GLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR----------------------- 266
G + + V T+L++ + +CG E ++FD M+KR
Sbjct: 235 ANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALE 294
Query: 267 --------GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG 318
G + +L C+ + A G+++H +++ G + V V AL+ +Y
Sbjct: 295 LYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYA 354
Query: 319 KHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
K G ++ A+ +F+ ++ ++ V+W+ LI +YA G +A + ++L GS + I
Sbjct: 355 KCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRL--GSR---DTI 409
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQ-LAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
W+A+I + NG A+ +FR+M A + ++VT +L CA L+ + +H
Sbjct: 410 CWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQ 469
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
+ + N++V N L+NMY +CG LEE +F ++K +++W +M++ + G A
Sbjct: 470 ISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEA 529
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
L F+EM G KPD V + ++L C+H G + +G R F M + P +H+A MVD
Sbjct: 530 LDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVD 589
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
LLGR+G L +A +++++MP EP+ W T L +CR+H ++ EA A +++ L +T
Sbjct: 590 LLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAP 649
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
Y+ +SNIYAA G WE A VR + +GLKK+ G S+IEV K+H FSSG +
Sbjct: 650 YIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEI 709
Query: 678 CEVLEELALQMENKGCVPDNDIIL 701
CE L L M G VPD +L
Sbjct: 710 CEELTRLHGLMRAAGYVPDTKAVL 733
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 209/462 (45%), Gaps = 86/462 (18%)
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
D TF V+ +C G + G+ +H + F+ + + N LI MY K + D+
Sbjct: 6 DNVTFLTVLCSCSSCGDV----AEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDA 61
Query: 191 FKLFDKV--RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+F+ + R +N +SWN M + +A N AL L+ RM L+GL + VT+ S
Sbjct: 62 RSVFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVS------ 115
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
VL C+ LA G+ IH V G + +
Sbjct: 116 -----------------------------VLGACSSLA---QGREIHNRVFYSGLDSFQS 143
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
+ NAL+ +Y + G V A+ +F ++ ++ SWNA+I +++++G A+ +F ++ K D
Sbjct: 144 LANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM-KCD 202
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
+PN ++ VI F++ L
Sbjct: 203 ----MKPNSTTYINVISGFST-----------------------------------PEVL 223
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
GR+IH +V + +++V L+NMY KCG E VF++++K+D+++WN MI Y
Sbjct: 224 PEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCY 283
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
NG AL ++++ GFK FV++L ACS + +GR + ++ E ++ +
Sbjct: 284 VQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHIL-ERGLDSE 342
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
+ +V++ + G L+EA + M +A W TL+ +
Sbjct: 343 VAVATALVNMYAKCGSLEEARKVFNAMK-NRDAVAWSTLIGA 383
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 191/561 (34%), Positives = 316/561 (56%), Gaps = 27/561 (4%)
Query: 161 HVLQMGFQGNVHIVN------ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
HV + + + H+++ EL ++A + + + RV + ++N FS L
Sbjct: 9 HVSPLHHRPSTHLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKL 68
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
F A E+ W + L S A + + LF +R+ I
Sbjct: 69 IFQLLDASEV-------------THWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYT 115
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ VL C+ L GK++HG+V K G + +F++N ++ +Y G++ VA+ +F ++
Sbjct: 116 CSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMP 175
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
++++++WN +I + G + A ++F++ M NV SW+++IG +A G+ +
Sbjct: 176 QRDVITWNIMIARLVKMGDAEGAYKLFAE--------MPERNVRSWTSMIGGYAQCGKSK 227
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
EA+DLF +M+ A ++ N VT+ +L CA+ L +GR IH R KNI V N L+
Sbjct: 228 EAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLI 287
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY+KCGCLE+ +F+ +E++ +++W++MI+G +G E+ALA F +MI G KP+ V
Sbjct: 288 DMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAV 347
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F+ +L ACSH G+V +GR+ F M R++ I P++EHY CMVDL RAGLLQEA + + N
Sbjct: 348 TFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMN 407
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP+ PN VWG LL C++HKN +AE + L G Y++LSNIYA +GRWED
Sbjct: 408 MPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDV 467
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
A+VR + +G+KK G S I V+ ++ F +G+ + + + E+L +M+ KG V
Sbjct: 468 ARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYV 527
Query: 695 PDNDIILWEMMGKKNVKRIQR 715
P+ ++L +M + K + R
Sbjct: 528 PNTSVVLLDMEEDQKEKFLYR 548
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 224/453 (49%), Gaps = 22/453 (4%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
HLL + +LKQ+H L+ T + S+ +RV S+ A A+ +F+ S
Sbjct: 20 HLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLD---AS 76
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
WN+ LR +A+ L+ ++R+ + D +T V++AC + R G
Sbjct: 77 EVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRN----G 132
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+IVH +V ++G Q N+ + N ++ +YA G++ + K+FDK+ ++ I+WN+M +
Sbjct: 133 KIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKM 192
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
D +GA +LF M E N +WTS++ +A+CG+ +E +DLF M G+ +
Sbjct: 193 GDAEGAYKLFAEMP----ERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTV 248
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
VL CAD+ +G+ IH F + G+E + V N LI +Y K G ++ A +F +EE
Sbjct: 249 VAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEE 308
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
+ +VSW+A+I A G ++A+ +F+++ ++ G +PN +++ ++ A + G E+
Sbjct: 309 RTVVSWSAMIAGLAAHGRAEDALALFNKM--INTGV--KPNAVTFIGILHACSHMGMVEK 364
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
F M + + G + A L +E H ++ + + N +V LL
Sbjct: 365 GRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLL--QEAHEFIMNMPIAPNGVVWGALLG 422
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
GC ++ + + L + + GY
Sbjct: 423 -----GCKVHKNIKLAEEATRHLSKLDPLNDGY 450
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 178/413 (43%), Gaps = 57/413 (13%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPF---------------- 91
K VH + G ++ FL ++ +YA G + AR VF+ P
Sbjct: 133 KIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKM 192
Query: 92 -DCKSSSLL-----------WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVI 139
D + + L W S++ G + A+ L+++M G+L + T V+
Sbjct: 193 GDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVL 252
Query: 140 RACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV 199
AC MG+ G+ +H+ + G++ N+ + N LI MY K G + D+ ++FD +
Sbjct: 253 VACADMGNL----VLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEE 308
Query: 200 KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDL 259
+ +SW+ M +G A + + AL LF +M G++PN VT+ +L + + G +E+
Sbjct: 309 RTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKY 368
Query: 260 F-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG 318
F M R GI E ++ + + + + H F++ V AL+
Sbjct: 369 FASMTRDYGIVPRIEHYGCMVDL---FSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCK 425
Query: 319 KHGDVKVAQNL---FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
H ++K+A+ S+++ N + L YAEAG ++ V + D G + P
Sbjct: 426 VHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMR--DRGVKKTP 483
Query: 376 NVISWSAV---------IGAFASNGRGEEALD----LFRKMQLAKVVANSVTI 415
WS++ + ++ + EE L ++M+L V N+ +
Sbjct: 484 ---GWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLKGYVPNTSVV 533
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 214/620 (34%), Positives = 340/620 (54%), Gaps = 28/620 (4%)
Query: 82 ARNVFETAPFDCKSSSLLWNSILRV--NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVI 139
A ++F+ P S+ L+++ LR S+G + + LY +M + V D FTF +
Sbjct: 56 ALSLFDRMP----CSTFLFDTALRACFRASSG-PDRPIILYRRMHGVDVPPDAFTFHFLF 110
Query: 140 RACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIV-NELIGMYAKMGQMSDSFKLFDKVR 198
+ C G+ G+++H + V ++ + +I MYA++G D+ + FD+
Sbjct: 111 KCCARGGAHVL---LGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEAS 167
Query: 199 VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD 258
VK+ ++W + SG A D A L R + N VTWT L+S ++R GR E +D
Sbjct: 168 VKDVVAWTTVISGLAKMGLLDDARRLLARAPVR----NVVTWTGLISGYSRAGRAAEAVD 223
Query: 259 LFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV--IKGGFEDYVFVKNALICV 316
F+ M GI + +LS C L + G +H V + D + V ALI +
Sbjct: 224 CFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVV--ALIDM 281
Query: 317 YGKHGDVKVAQNLFSEIEE-KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
Y K GD A+ +F + + WNA+I Y + G D A +F Q+E D
Sbjct: 282 YAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHD------- 334
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH 435
VI+++++I + GR EAL LF KM+ + A++ T+ GLL+ A AL GR +H
Sbjct: 335 -VITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALH 393
Query: 436 GHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
+ + + +++ + LL+MYMKCG +EE + F+Q+ +D+ TW++MI G NG+G+
Sbjct: 394 ACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGK 453
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
AL F M GF + V ++AVL+ACSH+ L++EGR FD M I PQ+EHY CM
Sbjct: 454 AALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCM 513
Query: 556 VDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETT 615
+DLLGR+GLL EA D+V+ MPM+PNA +W ++L++CR+HKN D+A+ A + L
Sbjct: 514 IDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAED 573
Query: 616 GSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLK 675
Y+ + NIY S +WEDA+K+R + +G+KK AG S I V ++H F G+ +
Sbjct: 574 AVYVQMYNIYIDSRQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIA 633
Query: 676 NVCEVLEELALQMENKGCVP 695
+ ++EE+ ++++ G P
Sbjct: 634 EIVVMMEEIGRRLKSAGYSP 653
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 213/697 (30%), Positives = 365/697 (52%), Gaps = 59/697 (8%)
Query: 9 PHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAAR 68
P + SNP++P T NN L+++C ++ QLKQ H +I TG + + A++
Sbjct: 13 PRHPNFSNPNQP----TTNNERSRHIS-LIERCVSLRQLKQTHGHMIRTGTFSDPYSASK 67
Query: 69 VLSIYA--RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM-RK 125
+ ++ A F L AR VF+ P K +S WN+++R S ++ ++ M +
Sbjct: 68 LFAMAALSSFASLEYARKVFDEIP---KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE 124
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
+ +TFP +I+A + S S GQ +H ++ +V + N LI Y G
Sbjct: 125 SQCYPNKYTFPFLIKAAAEVSSL----SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCG 180
Query: 186 QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
+ + K+F ++ E + V+W S+++
Sbjct: 181 DLDSACKVFTTIK-----------------------------------EKDVVSWNSMIN 205
Query: 246 SHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
+ G ++ ++LF M ++ + VLS CA + G+ + ++ +
Sbjct: 206 GFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV 265
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
+ + NA++ +Y K G ++ A+ LF +EEK+ V+W ++ YA + + A EV +
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN--- 322
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA-NSVTISGLLSVCAE 424
SM + ++++W+A+I A+ NG+ EAL +F ++QL K + N +T+ LS CA+
Sbjct: 323 -----SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
AL +GR IH ++ + + N V + L++MY KCG LE+ VF +EK+D+ W++M
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I G M+G G A+ F +M EA KP+GV F V ACSH GLV+E +F M +
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
I P+ +HYAC+VD+LGR+G L++A ++ MP+ P+ VWG LL +C++H N ++AE
Sbjct: 498 IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMAC 557
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
+++ L G+++LLSNIYA G+WE+ +++R + GLKK G S IE+ IH F
Sbjct: 558 TRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEF 617
Query: 665 SSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
SG++ + V L E+ ++++ G P+ +L
Sbjct: 618 LSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVL 654
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 230/702 (32%), Positives = 364/702 (51%), Gaps = 60/702 (8%)
Query: 32 DCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARV----LSIYARFGRLFDARNVFE 87
DCF L++ C+ + ++ L+ R+ LS++ RFG + +A NVF
Sbjct: 34 DCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVRLGNALLSMFVRFGDVGNAWNVFG 93
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
+ WN ++ G ++ AL LY ++ G+ D +TFP V+R+C +
Sbjct: 94 RMG---ERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSC----A 146
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
G+ VH HV++ F +V +VN LI MY K G + + LFDK+ ++ ISWN
Sbjct: 147 GAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNA 206
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS-------------HARCGR-- 252
M SG+ N +C LELF RM ++P+ +T TS++S+ H+ R
Sbjct: 207 MISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTA 266
Query: 253 LEETMDLFDMMRKRGIEVG----AEAI------------AVVLSVCAD-LAADHMGKVIH 295
+ + +++ + + + VG AE++ ++S C D L D +
Sbjct: 267 YDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYK 326
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN-----IVSWNALITSYAE 350
I G D V + + L G + + L E+ E+ +V N+LI Y++
Sbjct: 327 TMEITGTMPDEVTIASVLSAC-ASLGQLDMGMKL-HELAERTGHILYVVVANSLIDMYSK 384
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
++A+E+F Q+ D VISW++VI N R EAL FRKM L K
Sbjct: 385 CKRIEKALEIFHQIPDKD--------VISWTSVINGLRINNRCFEALIFFRKMIL-KSKP 435
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
NSVT+ LS CA AL G+EIH H ++ M + + N +L++Y++CG + F
Sbjct: 436 NSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQF 495
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
+ +KD+ WN +++GY G G + F+ M+E+ PD V F+++L ACS +G+V
Sbjct: 496 -NLNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVT 554
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
EG F M + I P ++HYAC+VDLLGRAG L EA + ++ MP++P+ +WG LLN+
Sbjct: 555 EGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNA 614
Query: 591 CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVA 650
CR+H++ + E A IF E+ G Y+LL N+YA SG+W++ AKVR + K +GL
Sbjct: 615 CRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDP 674
Query: 651 GQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
G SW+EVK K+H F SG++ ++ + VLE +M+ G
Sbjct: 675 GCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSG 716
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 169/361 (46%), Gaps = 27/361 (7%)
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
NAL++ + G A VF G M ++ SW+ ++G + G +EAL L+
Sbjct: 73 NALLSMFVRFGDVGNAWNVF--------GRMGERDLFSWNVLVGGYTKAGFFDEALCLYH 124
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
++ A + + T +L CA + L GRE+H HVVR + ++ V N L+ MY+KCG
Sbjct: 125 RILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCG 184
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
+ ++F+++ +D I+WN+MISGY N L F M E PD + +V+S
Sbjct: 185 DVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVIS 244
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
AC G G ++ +VR + + Y ++ + G +EA + M +
Sbjct: 245 ACELLGDERLGTQLHSYVVRT-AYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECR-DV 302
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISA 641
W T+++ C + D +A+ + IT T + ++++ +A ++ +
Sbjct: 303 VSWTTIISGCVDNLLPD--KALETYKTMEITGTMPDEVTIASVLSACA---SLGQLDMGM 357
Query: 642 KTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
K L + G I NSL D+ + C+ +E+ AL++ ++ +PD D+I
Sbjct: 358 KLHELAERTGH--------ILYVVVANSL-IDMYSKCKRIEK-ALEIFHQ--IPDKDVIS 405
Query: 702 W 702
W
Sbjct: 406 W 406
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK-NIL 448
+G E+AL MQ K+ L+ +C + G + V+ + ++
Sbjct: 11 SGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSVR 70
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
+ N LL+M+++ G + VF ++ ++DL +WN ++ GY G + AL + ++ AG
Sbjct: 71 LGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAG 130
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+PD F +VL +C+ A + GR + +VR F + ++ ++ + + G + A
Sbjct: 131 IRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVR-FDFDMDVDVVNALITMYVKCGDVVSA 189
Query: 569 SDIVKNMP 576
+ MP
Sbjct: 190 RMLFDKMP 197
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 362 bits (930), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 229/716 (31%), Positives = 379/716 (52%), Gaps = 60/716 (8%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++++ C ++ + VH+ G + F + ++ +YA G + DAR VF+ P
Sbjct: 115 FPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELP 174
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
++LWN +LR V +G ++NA+ + +MR + + T+ ++ C G+F
Sbjct: 175 L---RDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNF-- 229
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G +H V+ GF+ + + N L+ MY+K G + + KLF+ + + ++WN + +
Sbjct: 230 --CAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIA 287
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDL----------F 260
G+ N D A LF M G++P+ VT+ S L S G L ++ F
Sbjct: 288 GYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPF 347
Query: 261 DMMRKRGI--------------EVGAEAIAVVLSVCADLAADHMGKVIHG---------- 296
D+ K + ++ + I V ++VC + + G V+HG
Sbjct: 348 DVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMIS---GYVLHGLNIDAINTFR 404
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK---NIVSWNALITS-YAEAG 352
++I+ G +++ +K + L I +K NIV+ + IT YA+ G
Sbjct: 405 WLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCG 464
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
D A E F ++ D + W+++I +F+ NG+ E A+DLFR+M ++ +S
Sbjct: 465 RLDLAYEFFRRMSDRDS--------VCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDS 516
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
V++S LS A AL G+E+HG+V+R + + + V + L++MY KCG L VF
Sbjct: 517 VSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNL 576
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
++ K+ ++WNS+I+ YG +G L + EM+ AG PD V F+ ++SAC HAGLV+EG
Sbjct: 577 MDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEG 636
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
F M RE+ I +MEHYACMVDL GRAG + EA D +K+MP P+A VWGTLL +CR
Sbjct: 637 IHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACR 696
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
+H N ++A+ + + L + +G Y+LLSN++A +G W KVR K KG++K+ G
Sbjct: 697 LHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGY 756
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILW-EMMGK 707
SWI+V HMFS+ + + + +L+ L L++ +G VP + L ++MGK
Sbjct: 757 SWIDVNGGTHMFSAADGNHPESVEIYLILKSLLLELRKQGYVPQPYLPLHPQIMGK 812
Score = 202 bits (513), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 151/584 (25%), Positives = 265/584 (45%), Gaps = 88/584 (15%)
Query: 28 NSLLDCFDHLLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
+SL + L + C + Q +QVH Q+IV G ++RVL +Y GR DA N
Sbjct: 8 DSLTTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGN 67
Query: 85 VFETAPFDCK-SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
+F F+ + +L WN ++R G ++ AL Y KM V D +TFP VI+AC
Sbjct: 68 LF----FELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACG 123
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
+ + +VH+ +GF ++ + LI +YA G + D+ ++FD++ +++ I
Sbjct: 124 GLNN----VPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTI 179
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
WN+M G+ + D D A+ F M N VT+T
Sbjct: 180 LWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYT---------------------- 217
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
+LS+CA G +HG VI GFE V N L+ +Y K G++
Sbjct: 218 -------------CILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNL 264
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
A+ LF+ + + + V+WN LI Y + G DEA
Sbjct: 265 LYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAP------------------------ 300
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
LF M A V +SVT + L ES +L +E+H ++VR +
Sbjct: 301 ---------------LFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRV 345
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
++ +++ L+++Y K G +E +F+Q D+ +MISGY ++GL +A+ TF
Sbjct: 346 PFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRW 405
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
+I+ G + + +VL AC+ + G+ + ++++ R+E + + + D+ + G
Sbjct: 406 LIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKK-RLENIVNVGSAITDMYAKCG 464
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
L A + + M + ++ W ++++S + ++A + Q+
Sbjct: 465 RLDLAYEFFRRMS-DRDSVCWNSMISSFSQNGKPEIAIDLFRQM 507
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 362 bits (930), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 214/650 (32%), Positives = 351/650 (54%), Gaps = 66/650 (10%)
Query: 111 GLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN 170
G ENA++L +K + + T+ V++ C S + G+ VH+ + +
Sbjct: 80 GNLENAMELVCMCQKSEL--ETKTYSSVLQLCAGSKSL----TDGKKVHSIIKSNNVAVD 133
Query: 171 VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
+ +L+ +YA G + + ++FD + KN WN M S +A D ++ LFK M
Sbjct: 134 EVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVE 193
Query: 231 EGLE---P-------------NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
+G+E P + ++W S++S + G E ++++ M GI+V
Sbjct: 194 KGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLAT 253
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
I VL CA+ +GK +H IK FE + N L+ +Y K GD+ A +F ++
Sbjct: 254 IISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 313
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEK----------------------LDGG-- 370
E+N+VSW ++I Y G D A+ + Q+EK LD G
Sbjct: 314 ERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKD 373
Query: 371 --------SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA----------NS 412
+ME N+ +A++ + G + A +F M + +++ +S
Sbjct: 374 VHDYIKANNME-SNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDS 432
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
T++ +L CA +AL G+EIHG+++R + + V N L+++Y+KCG L L+F+
Sbjct: 433 RTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 492
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
I KDL++W MISGYGM+G G A+ATF EM +AG +PD V+F+++L ACSH+GL+ +G
Sbjct: 493 IPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
R F +M +F IEP++EHYACMVDLL R G L +A + ++ +P+ P+A +WG LL CR
Sbjct: 553 WRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCR 612
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
++ + ++AE +A ++F L E TG Y+LL+NIYA + +WE+ ++R KGL+K G
Sbjct: 613 IYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGC 672
Query: 653 SWIEVKRKIHMFSSG-NSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
SWIE+K K+++F SG NS K + +L+++ +M+ +G P L
Sbjct: 673 SWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYAL 722
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 207/467 (44%), Gaps = 104/467 (22%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ +LQ C K++ K+VH+ + L +++S+YA G L + R VF+T
Sbjct: 102 YSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTME 161
Query: 91 ----------------------------------------------FD--CKSSSLLWNS 102
FD C + WNS
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNS 221
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
++ VSNGL E L++Y +M LG+ D T V+ C G+ S G+ VH+
Sbjct: 222 MISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGT----LSLGKAVHSLA 277
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
++ F+ ++ N L+ MY+K G + + ++F+K+ +N +SW M +G+ + DGA+
Sbjct: 278 IKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAI 337
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD-------------------LFDMM 263
L ++ME EG++ + V TS+L + AR G L+ D L DM
Sbjct: 338 RLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMY 397
Query: 264 RKRGIEVGAEAI--------------------------AVVLSVCADLAADHMGKVIHGF 297
K G GA ++ A +L CA L+A GK IHG+
Sbjct: 398 TKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPACASLSALERGKEIHGY 457
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
+++ G+ V NAL+ +Y K G + +A+ LF I K++VSW +I+ Y G +EA
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEA 517
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+ F+++ D G P+ +S+ +++ A + +G E+ F M+
Sbjct: 518 IATFNEMR--DAGI--EPDEVSFISILYACSHSGLLEQGWRFFYIMK 560
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 157/355 (44%), Gaps = 40/355 (11%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
H + ++ K VH+ + ++ F+ ++ +Y + G + A +VF T
Sbjct: 360 HACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVV---K 416
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ WN+++ LK D T ++ AC + + G
Sbjct: 417 DIISWNTMI----------GELK-----------PDSRTMACILPACASLSALE----RG 451
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ +H ++L+ G+ + H+ N L+ +Y K G + + LFD + K+ +SW +M SG+ ++
Sbjct: 452 KEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMH 511
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEA 274
+ A+ F M G+EP+ V++ S+L + + G LE+ F +M+ IE E
Sbjct: 512 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEH 571
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV----KVAQNLF 330
A ++ + + ++ K + F+ + AL+C + D+ KVA+ +F
Sbjct: 572 YACMVDLLSRTG--NLSKA-YEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVF 628
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
E+E +N + L YAEA ++ EV EK+ + + SW + G
Sbjct: 629 -ELEPENTGYYVLLANIYAEA---EKWEEVKRMREKIGKKGLRKNPGCSWIEIKG 679
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 229/696 (32%), Positives = 353/696 (50%), Gaps = 100/696 (14%)
Query: 12 FSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAAR 68
SP++ S P +L F LL+ C L + VH QL G + A A
Sbjct: 215 MSPASGSGP---------VLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATA 265
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL-G 127
+ ++YA+ R DAR VF+ P + WN+++ NGL E A+ + V+M++ G
Sbjct: 266 LANMYAKCRRPGDARRVFDRMP---ARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDG 322
Query: 128 VLGDGFTFPLVIRAC---KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
D T V+ AC + +G+ R VH ++ GF V++ ++ +Y K
Sbjct: 323 ERPDAVTLVSVLPACADAQALGACRE-------VHAFAVRGGFDEQVNVSTAILDVYCKC 375
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G + + K+FD ++ +N +SWN M G+A N D AL LFKRM EG++ VT S+L
Sbjct: 376 GAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVD---VTDVSVL 432
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
++ L C +L G+ +H +++ G E
Sbjct: 433 AA--------------------------------LHACGELGFLDEGRRVHELLVRIGLE 460
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
V V NALI +Y K +A +F E+ K VSWNA+I + G ++AV +FS
Sbjct: 461 SNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFS-- 518
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
+MQL V +S T+ ++ A+
Sbjct: 519 -------------------------------------RMQLENVKPDSFTLVSIIPALAD 541
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
+ R IHG+ +R+ +++++ V L++MY KCG + +F + +ITWN+M
Sbjct: 542 ISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAM 601
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I GYG +G G+ A+ FEEM +G P+ F++VLSACSHAGLV+EG+ F M ++
Sbjct: 602 IHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYG 661
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
+EP MEHY MVDLLGRAG L EA ++ MPMEP V+G +L +C++HKN ++AE A
Sbjct: 662 LEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESA 721
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
+IF L E ++LL+NIYA + W+D A+VR + + KGL+K G S +++K +IH F
Sbjct: 722 QRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTF 781
Query: 665 SSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
SG++ K++ L +L +++ G VPD D I
Sbjct: 782 YSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTDSI 817
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 191/578 (33%), Positives = 319/578 (55%), Gaps = 64/578 (11%)
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ VH+ ++ + N + +L+ YA + ++ + K+FD++ +N I N+M + N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
+++F M + P+ T+
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTF----------------------------------- 143
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
VL C+ +G+ IHG K G +FV N L+ +YGK G + A+ + E+
Sbjct: 144 PCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKL----DGGSME------------------ 373
+++VSWN+L+ YA+ D+A+EV ++E + D G+M
Sbjct: 204 RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVK 263
Query: 374 -------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
+ +++SW+ +IG + N EA++L+ +M+ ++V+I+ +L C +++
Sbjct: 264 DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
AL++G++IHG++ R + N+L++N L++MY KCGCLE+ VFE ++ +D+++W +MIS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
YG +G G +A+A F ++ ++G PD +AFV L+ACSHAGL+ EGR F +M ++I
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
P++EH ACMVDLLGRAG ++EA +++M MEPN VWG LL +CR+H +TD+ A +
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 607 IFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSS 666
+F L E +G Y+LLSNIYA +GRWE+ +R K+KGLKK G S +EV R IH F
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLV 563
Query: 667 GNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G+ + L+ L +M+ G VPD++ L ++
Sbjct: 564 GDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDV 601
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 198/401 (49%), Gaps = 44/401 (10%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
+L I L+ VH+++I+ ++ L +++ YA + AR VF+ P +
Sbjct: 47 QVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIP---ER 103
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ ++ N ++R V+NG Y +K++ M V D +TFP V++AC G+ G
Sbjct: 104 NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTI----VIG 159
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ +H ++G + + N L+ MY K G +S++ + D++ ++ +SWN + G+A N
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQN 219
Query: 216 FDCDGALELFKRME----------LEGLEP-----------------------NFVTWTS 242
D ALE+ + ME + L P + V+W
Sbjct: 220 QRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNV 279
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
++ + + E ++L+ M G E A +I VL C D +A +GK IHG++ +
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
+ ++NALI +Y K G ++ A+++F ++ +++VSW A+I++Y +G +AV +FS
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+L+ D G + P+ I++ + A + G EE F+ M
Sbjct: 400 KLQ--DSGLV--PDSIAFVTTLAACSHAGLLEEGRSCFKLM 436
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 25/235 (10%)
Query: 34 FDHLLQQCKTIHQLKQVHN-----QLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
FD L+ C+ + +K H+ L+ +N + V ++ + G
Sbjct: 222 FDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMG----------- 270
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
K S + WN ++ V + N + A++LY +M G D + V+ AC +
Sbjct: 271 -----KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
S G+ +H ++ + N+ + N LI MYAK G + + +F+ ++ ++ +SW M
Sbjct: 326 ----SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAM 381
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
S + + A+ LF +++ GL P+ + + + L++ + G LEE F +M
Sbjct: 382 ISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 436
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 221/702 (31%), Positives = 352/702 (50%), Gaps = 96/702 (13%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM--RKLGVLGD 131
AR G + AR FE P +S +N++L N L + AL L+ +M R L
Sbjct: 28 ARAGNIEGARAAFEAMPLRTTAS---YNALLAGYFRNRLPDAALGLFRRMPSRDLASYN- 83
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
+ R + + F +V L+ Y + G ++D+
Sbjct: 84 -----------ALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAI 132
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
+LF ++ +N++S+ ++ G + A LF M + + V WT++LS + + G
Sbjct: 133 RLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP----DRDVVAWTAMLSGYCQAG 188
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
R+ E LFD M KR V
Sbjct: 189 RITEARALFDEMPKRN---------------------------------------VVSWT 209
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK----- 366
A+I Y ++G+V +A+ LF + E+N VSW A++ Y +AG ++A E+F+ + +
Sbjct: 210 AMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAA 269
Query: 367 -------------LDGGSM------ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
+D ER + +WSA+I A+ N EAL FR+M
Sbjct: 270 CNAMMVGFGQRGMVDAAKTVFEKMCERDDG-TWSAMIKAYEQNEFLMEALSTFREMLWRG 328
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
V N ++ +L+VCA A L+ GRE+H ++R S + ++ + L+ MY+KCG L++
Sbjct: 329 VRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAK 388
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
VF E KD++ WNSMI+GY +GLGE AL F +M AG PDG+ ++ L+ACS+ G
Sbjct: 389 RVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTG 448
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
V EGR IF+ M I P EHY+CMVDLLGR+GL++EA D++KNMP+EP+A +WG L
Sbjct: 449 KVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGAL 508
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
+ +CRMH+N ++AE A ++ L G Y+LLS+IY + GRWEDA+K+R ++ L
Sbjct: 509 MGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLN 568
Query: 648 KVAGQSWIEVKRKIHMFSSGNSL-QSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMG 706
K G SWIE +++H+F+SG+ L + + +LE+L + G D +L
Sbjct: 569 KSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSADGSFVL----- 623
Query: 707 KKNVKRIQRIRADNIKSKHRIVGFRNLK----LGLRLLLSLR 744
++ Q+ + S+ + V + LK + +R++ +LR
Sbjct: 624 -HDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLR 664
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 156/337 (46%), Gaps = 54/337 (16%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS Y + GR+ +AR +F+ P K + + W +++ NG A KL+ M +
Sbjct: 180 MLSGYCQAGRITEARALFDEMP---KRNVVSWTAMISGYAQNGEVNLARKLFEVMPE--- 233
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ V L+G Y + G +
Sbjct: 234 ---------------------------------------RNEVSWTAMLVG-YIQAGHVE 253
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
D+ +LF+ + + N M GF D A +F++M E + TW++++ ++
Sbjct: 254 DAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKM----CERDDGTWSAMIKAYE 309
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ L E + F M RG+ ++ +L+VCA LA G+ +H +++ F+ VF
Sbjct: 310 QNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVF 369
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
+ALI +Y K G++ A+ +F E K+IV WN++IT YA+ GL ++A+ +F + +L
Sbjct: 370 AVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDM-RLA 428
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
G S P+ I++ + A + G+ +E ++F M +
Sbjct: 429 GMS---PDGITYIGALTACSYTGKVKEGREIFNSMTV 462
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 151/322 (46%), Gaps = 49/322 (15%)
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD-- 368
NA I + G+++ A+ F + + S+NAL+ Y L D A+ +F ++ D
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 369 -------GGSMER----------------PNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
G S+ R P+V+S+++++ + +G +A+ LF++M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
V+ +V + GLL ++ +N R + + +++++ +L+ Y + G + E
Sbjct: 141 RNHVSYTVLLGGLL----DAGRVNEARRLFDEMP----DRDVVAWTAMLSGYCQAGRITE 192
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
+F+++ K+++++W +MISGY NG A FE M E + V++ A+L
Sbjct: 193 ARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER----NEVSWTAMLVGYIQ 248
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYAC--MVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
AG V + +F+ M P+ AC M+ G+ G++ A + + M E +
Sbjct: 249 AGHVEDAAELFNAM-------PEHPVAACNAMMVGFGQRGMVDAAKTVFEKM-CERDDGT 300
Query: 584 WGTLLNSCRMHKNTDVAEAMAS 605
W ++ + +N + EA+++
Sbjct: 301 WSAMIKA--YEQNEFLMEALST 320
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 105/224 (46%), Gaps = 12/224 (5%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
++VH ++ + F + ++++Y + G L A+ VF T F+ K ++WNS++
Sbjct: 353 REVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHT--FEPK-DIVMWNSMITGY 409
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR-FRFSFGQIVHNHVLQMG 166
+GL E AL ++ MR G+ DG T+ + AC + G + R F + N ++ G
Sbjct: 410 AQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPG 469
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELF 225
+ +V+ L+G + G + ++F L + V+ + + W + ++ + + + F
Sbjct: 470 AEHYSCMVD-LLG---RSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAE--IAEF 523
Query: 226 KRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGI 268
+L LEP LLS + GR E+ + + R +
Sbjct: 524 AAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNL 567
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 216/678 (31%), Positives = 355/678 (52%), Gaps = 48/678 (7%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM--RKLGVLGD 131
AR G + AR FE P +S +N++L N L + AL L+ +M R L
Sbjct: 28 ARAGNIEGARAAFEAMPLRTTAS---YNALLAGYFRNRLPDAALGLFRRMPSRDLASYN- 83
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
+ R + + F +V L+ Y + G ++D+
Sbjct: 84 -----------ALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAI 132
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
+LF ++ +N++S+ ++ G + A LF M + + V WT++LS + + G
Sbjct: 133 RLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMP----DRDVVAWTAMLSGYCQAG 188
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
R+ E LFD M KR + + ++S A ++ + + + + +
Sbjct: 189 RITEARALFDEMPKRNVV----SWTAMISGYAQNGEVNLARKLFEVMPERNEVSW----T 240
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
A++ Y + G V+ A LF+ + E + + NA++ + + G+ D A VF ++ + D G+
Sbjct: 241 AMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGT 300
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
WSA+I A+ N EAL FR+M V N ++ +L+VCA A L+ G
Sbjct: 301 --------WSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYG 352
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
RE+H ++R S + ++ + L+ MY+KCG L++ VF E KD++ WNSMI+GY +
Sbjct: 353 REVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQH 412
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
GLGE AL F +M AG PDG+ ++ L+ACS+ G V EGR IF+ M I P EH
Sbjct: 413 GLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEH 472
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
Y+CMVDLLGR+GL++EA D++KNMP+EP+A +WG L+ +CRMH+N ++AE A ++ L
Sbjct: 473 YSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELE 532
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSL- 670
G Y+LLS+IY + GRWEDA+K+R ++ L K G SWIE +++H+F+SG+ L
Sbjct: 533 PGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLA 592
Query: 671 QSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHRIVGF 730
+ + +LE+L + G D +L ++ Q+ + S+ + V +
Sbjct: 593 HPEHAAILRILEKLDGLLMESGYSADGSFVL------HDIDEEQKSHSLRYHSERQAVAY 646
Query: 731 RNLK----LGLRLLLSLR 744
LK + +R++ +LR
Sbjct: 647 GLLKIPEGMPIRVMKNLR 664
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 156/337 (46%), Gaps = 54/337 (16%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS Y + GR+ +AR +F+ P K + + W +++ NG A KL+ M +
Sbjct: 180 MLSGYCQAGRITEARALFDEMP---KRNVVSWTAMISGYAQNGEVNLARKLFEVMPE--- 233
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ V L+G Y + G +
Sbjct: 234 ---------------------------------------RNEVSWTAMLVG-YIQAGHVE 253
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
D+ +LF+ + + N M GF D A +F++M E + TW++++ ++
Sbjct: 254 DAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKM----CERDDGTWSAMIKAYE 309
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ L E + F M RG+ ++ +L+VCA LA G+ +H +++ F+ VF
Sbjct: 310 QNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVF 369
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
+ALI +Y K G++ A+ +F E K+IV WN++IT YA+ GL ++A+ +F + +L
Sbjct: 370 AVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDM-RLA 428
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
G S P+ I++ + A + G+ +E ++F M +
Sbjct: 429 GMS---PDGITYIGALTACSYTGKVKEGREIFNSMTV 462
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 151/322 (46%), Gaps = 49/322 (15%)
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD-- 368
NA I + G+++ A+ F + + S+NAL+ Y L D A+ +F ++ D
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 369 -------GGSMER----------------PNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
G S+ R P+V+S+++++ + +G +A+ LF++M
Sbjct: 81 SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
V+ +V + GLL ++ +N R + + +++++ +L+ Y + G + E
Sbjct: 141 RNHVSYTVLLGGLL----DAGRVNEARRLFDEMP----DRDVVAWTAMLSGYCQAGRITE 192
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
+F+++ K+++++W +MISGY NG A FE M E + V++ A+L
Sbjct: 193 ARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER----NEVSWTAMLVGYIQ 248
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYAC--MVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
AG V + +F+ M P+ AC M+ G+ G++ A + + M E +
Sbjct: 249 AGHVEDAAELFNAM-------PEHPVAACNAMMVGFGQRGMVDAAKTVFEKM-CERDDGT 300
Query: 584 WGTLLNSCRMHKNTDVAEAMAS 605
W ++ + +N + EA+++
Sbjct: 301 WSAMIKA--YEQNEFLMEALST 320
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 105/224 (46%), Gaps = 12/224 (5%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
++VH ++ + F + ++++Y + G L A+ VF T F+ K ++WNS++
Sbjct: 353 REVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHT--FEPK-DIVMWNSMITGY 409
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR-FRFSFGQIVHNHVLQMG 166
+GL E AL ++ MR G+ DG T+ + AC + G + R F + N ++ G
Sbjct: 410 AQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPG 469
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELF 225
+ +V+ L+G + G + ++F L + V+ + + W + ++ + + + F
Sbjct: 470 AEHYSCMVD-LLG---RSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAE--IAEF 523
Query: 226 KRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGI 268
+L LEP LLS + GR E+ + + R +
Sbjct: 524 AAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNL 567
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 362 bits (928), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 234/801 (29%), Positives = 398/801 (49%), Gaps = 146/801 (18%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANAS-AFLAARVLSIYARFGRLFDARNVFETAPFD 92
+L+ C + L QVH + + G +A+ L R++ +Y R DA VF + P
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKM--RKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ +L WN ++R G Y +AL Y+KM L D TFP V+++C +G+
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAI-- 162
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+ G++VH +G G++ + + LI MYA G + D+ ++FD + ++ + WN+M
Sbjct: 163 --ALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMD 220
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWT----------------------------- 241
G+ A+ELF M G EPNF T
Sbjct: 221 GYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLES 280
Query: 242 ------SLLSSHARCGRLEETMDLFDM-------------------------------MR 264
+L+S +A+C L++ LF + M+
Sbjct: 281 EVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQ 340
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
K GI + + +L DL + GK +HG++++ VF+ +AL+ +Y K V+
Sbjct: 341 KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
+AQ+++ + ++V + +I+ Y G+ EAV++F L L+ G RPN ++ ++V+
Sbjct: 401 MAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYL--LEQGI--RPNAVAIASVL 456
Query: 385 GAFAS-------------------NGRG--EEAL-DLFRKMQ--------LAKVVA-NSV 413
A AS GR E AL D++ K +K+ A + V
Sbjct: 457 PACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEV 516
Query: 414 TISGLLSVCAESA----ALNI-------------------------------GREIHGHV 438
T + ++S A++ ALN+ G+EIHG V
Sbjct: 517 TWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVV 576
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
++ + ++ ++ L++MY KCG LE H VFE + +K+ ++WNS+I+ YG GL + ++
Sbjct: 577 IKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESV 636
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
+ M E GFK D V F+A++SAC+HAG V EG R+F M E++I P+MEH+ACMVDL
Sbjct: 637 SLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDL 696
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
RAG L +A +++ +MP +P+A +WG LL++CR+H+N ++AE + ++F L +G Y
Sbjct: 697 YSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYY 756
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
+L+SNI A +GRW+ +KVR K ++K+ G SW++V H+F + + D +++
Sbjct: 757 VLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIY 816
Query: 679 EVLEELALQMENKGCVPDNDI 699
L+ + L++ +G +P D+
Sbjct: 817 MSLKSILLELREEGYIPMPDL 837
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
+ Y+N + I+ K++H +I A F + ++ +Y + G L A
Sbjct: 546 VKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAH 605
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
VFE+ P + + + WNSI+ + GL + ++ L M++ G D TF ++ AC
Sbjct: 606 RVFESMP---EKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACA 662
Query: 144 FMGSFR 149
G +
Sbjct: 663 HAGQVQ 668
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 362 bits (928), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 217/654 (33%), Positives = 342/654 (52%), Gaps = 86/654 (13%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH L+ G A + ++S YA+ R+ DA VF+ P + + WNSI+ S
Sbjct: 6 VHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMP---QRDIISWNSIIGGCAS 62
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF-GQIVHNHVLQMGFQ 168
NGLY+ A++L+V+M G D T V+ AC + +SF G +VH + ++ G
Sbjct: 63 NGLYDKAVELFVRMWLEGQELDSTTLLSVMPAC-----VQSHYSFIGGVVHGYSVRTGLI 117
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+ N L+ MY+ + K+F + KN +SW M + + D LF+ M
Sbjct: 118 SETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEM 177
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
LEG+ P+ TS L + A G E++
Sbjct: 178 GLEGIRPDVFAITSALDAFA----------------------GNESLK------------ 203
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
GK +HG+ I+ G E+ + V NAL+ +Y K G ++ A+ +F + +K+ +SWN LI Y
Sbjct: 204 -HGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGY 262
Query: 349 AEAGLCDEAVEVFSQ-LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
+ + L +EA +F++ L +L RPN ++ + ++ A AS
Sbjct: 263 SRSNLANEAFTLFNEMLLQL------RPNAVTMACILPAAAS------------------ 298
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
++L GRE+H + VR ++ V N L++MY+KCG L
Sbjct: 299 -----------------LSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLAR 341
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
+F+ + K+LI+W MI+GYGM+G G +A+A FE+M +G +PD +F A+L ACSH+G
Sbjct: 342 RLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSG 401
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
L +EG R F+ M E RIEP+++HYACMVDLL G L+EA + ++ MP+EP++ +W +L
Sbjct: 402 LRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSL 461
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
L CR+H+N +AE +A +F L E TG Y+LL+NIYA + RWE K++ +GL+
Sbjct: 462 LRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLR 521
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ G SWIEV+ K H+F + N + E L+++A +M+ +G P L
Sbjct: 522 ENTGCSWIEVRGKAHIFFAENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYAL 575
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 214/475 (45%), Gaps = 80/475 (16%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G +VH ++++ GF + N LI YAK ++ D+ +FD++ ++ ISWN + G A
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
N D A+ELF RM LEG E + T+LLS
Sbjct: 63 NGLYDKAVELFVRMWLEGQE---LDSTTLLS----------------------------- 90
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
V+ C +G V+HG+ ++ G + NAL+ +Y D + +F +E
Sbjct: 91 ---VMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNME 147
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
+KN+VSW A+ITSY AG D+ +F ++ L+G RP+V + ++ + AFA N
Sbjct: 148 QKNVVSWTAMITSYTRAGHFDKVAGLFQEM-GLEG---IRPDVFAITSALDAFAGN---- 199
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
+L G+ +HG+ +R + + + V N L+
Sbjct: 200 -------------------------------ESLKHGKSVHGYAIRNGIEEVLPVANALM 228
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
MY+KCG +EE +F+ + KKD I+WN++I GY + L A F EM+ +P+ V
Sbjct: 229 EMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAV 287
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
+L A + + GR + VR +E A +VD+ + G L A + +
Sbjct: 288 TMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANA-LVDMYVKCGALLLARRLF-D 345
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL-ITETTGSYMLLSNIYAAS 628
M N W ++ MH A A+ Q+ G I GS+ + +YA S
Sbjct: 346 MLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAI--LYACS 398
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 174/381 (45%), Gaps = 35/381 (9%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
+++ K VH I G +A ++ +Y + G + +AR +F+ K ++ WN
Sbjct: 200 ESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVT---KKDTISWN 256
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
+++ + L A L+ +M L + + T ++ A + S G+ +H +
Sbjct: 257 TLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAASLSSL----ERGREMHAY 311
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
++ G+ + + N L+ MY K G + + +LFD + KN ISW +M +G+ ++ A
Sbjct: 312 AVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDA 371
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGIEVGAEAIAVVLS 280
+ LF++M+ G++P+ +++++L + + G +E F+ MR + IE + A ++
Sbjct: 372 IALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVD 431
Query: 281 VCADLAADHMG--KVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS---EIEE 335
+ H G K + F+ E + +L+ H +VK+A+ + E+E
Sbjct: 432 LLC-----HTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEP 486
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV-ISWSAVIGA----FASN 390
+N + L YAEA E E +L+ GG R N SW V G FA N
Sbjct: 487 ENTGYYVLLANIYAEA----ERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAEN 542
Query: 391 GRGEEAL-------DLFRKMQ 404
+ + D+ R+MQ
Sbjct: 543 RNHPQGMRIAEFLDDVARRMQ 563
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 362 bits (928), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 206/608 (33%), Positives = 336/608 (55%), Gaps = 21/608 (3%)
Query: 94 KSSSLLWNSILRV----NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
+S+ L+++ LR S+G + L+ +MR+ V DGFTF + K S R
Sbjct: 2 PASTFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDGFTFHFLF---KCSSSSR 58
Query: 150 FRFSFGQIVHNHVLQ-MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
R ++H L+ M + N LI MY ++G D + FD++ VK+ +SW M+
Sbjct: 59 PRALLCTMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMV 118
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
SG A G L + + + + ++WTSL+++++R R +E +D F M GI
Sbjct: 119 ISGLAKM----GMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGI 174
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
+ VLS C+ L +G +H V + G + ALI +Y K GD A+
Sbjct: 175 APDDVTVIGVLSACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHARE 234
Query: 329 LFSEIEE-KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+F + + SWNA+I Y + G D A +F Q+E D +I+++++I +
Sbjct: 235 VFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRD--------IITFNSMITGY 286
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
+G+ EAL LF M+ + ++ T+ LLS CA AL GR +H + + +I
Sbjct: 287 IHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDI 346
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
+ LL+MYMKCG + E +VF+++ K+D+ W +MI+G NG+G+ L F +M
Sbjct: 347 YIGTALLDMYMKCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCD 406
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
GF+P+ V+++AVL+ACSH+ L+NEGR FD M + I PQ+EHY CM+DLLGR+GLL E
Sbjct: 407 GFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDE 466
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A D+VK MPM+PN+ +W ++L++CR+HK D+A+ A + + + Y+ L NI
Sbjct: 467 AMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYNICID 526
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
S +WEDA+K+R+ + + +KK AG S + V ++H F + + + +LEE++ +
Sbjct: 527 SRKWEDASKIRMLMEERQVKKTAGYSSVTVAGQVHKFVVSDKSHPRILEIIAMLEEISHR 586
Query: 688 MENKGCVP 695
+++ G P
Sbjct: 587 LKSAGYSP 594
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 150/629 (23%), Positives = 284/629 (45%), Gaps = 82/629 (13%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F +L C T L Q+H +++ G + F+ + +++ Y A ++F P
Sbjct: 738 FSTILGVCSTYEAL-QLHGRVLALGLCCNPFVGSALVNHYMHVESPHAALSLFRELPL-- 794
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
++ + N +LR + L E + ++ MR+ + +G ++ ++ C G +
Sbjct: 795 -QNTAMCNVVLRGLGNLKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEW---LE 850
Query: 154 FGQIVHNHVLQMGF-QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H VL+ G+ N+ + N L+ +Y+ +G D+ K + + ++ ISWN + S +
Sbjct: 851 QGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSVDTVKALNDILSEDVISWNSILSMY 910
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
A A+ K+M G P+ ++ SLL+ + G +
Sbjct: 911 ADRGHMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQ------------------ 952
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFS 331
+G IHG V K GF V V+ LI +YGK + +F+
Sbjct: 953 -----------------LGVQIHGIVHKLGFSCSSVHVQTTLIDMYGKCCCFDHSLAIFN 995
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
EI + N+LITS + D A+E+ + ++G + P+ +++SA + A
Sbjct: 996 EIPSIALECCNSLITSSLGCNMFDAALEILHCM-IVEGVT---PDDVTFSATMKAI---- 1047
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
S++ S L+ C + +H +V++ ++ V +
Sbjct: 1048 --------------------SLSASPSLTSC---------QMLHSCLVKLGFEMDMAVCS 1078
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L+ Y G L HL+FE + ++I + ++IS G G A+ F++M+ +G KP
Sbjct: 1079 SLITAYACAGQLSSSHLIFEGLLDPNVICFTAIISACARYGDGARAMELFDQMVSSGLKP 1138
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D V F+ ++ C AG+ EGR + ++M ++P H+ACMV+LL R G ++EA ++
Sbjct: 1139 DNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFACMVNLLSRDGFVKEAMEM 1198
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
++ P+ W +LL SC+ H + + A+ + + + + + +SN + G
Sbjct: 1199 MEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKDPATTLQVSNFFNDIGDR 1258
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
E A +++ K +KK +G S IEV +
Sbjct: 1259 ETALRIKEMTNVKEVKK-SGHSLIEVSHR 1286
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 117/262 (44%), Gaps = 40/262 (15%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C + L+ +H + G + S L ++ +YA+ G AR VF+
Sbjct: 184 VLSACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGR 243
Query: 94 KSSSLLWNSIL-------RVNVSNGLYEN------------------------ALKLYVK 122
+ S WN+I+ V+V+ L++ AL L++
Sbjct: 244 RPQS--WNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMN 301
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
MR+ + D FT ++ AC +G+ G+ +H + + +++I L+ MY
Sbjct: 302 MRRHDLRVDNFTVVSLLSACASLGA----LPQGRALHACIELRLVETDIYIGTALLDMYM 357
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K G+++++ +F ++ ++ +W M +G A N LE F +M +G +PN V++ +
Sbjct: 358 KCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQMRCDGFQPNPVSYIA 417
Query: 243 LLSSHARCGRLEETMDLFDMMR 264
+L++ + L E FD MR
Sbjct: 418 VLTACSHSCLLNEGRLYFDEMR 439
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 100/222 (45%), Gaps = 10/222 (4%)
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
+M +V S + +I F +G + A ++R M + + T S +L VC+ AL
Sbjct: 694 TMAVRDVASLNRMITGFIRDGLADRARAVYRWMVASGIRETPHTFSTILGVCSTYEAL-- 751
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
++HG V+ + + N V + L+N YM +F ++ ++ N ++ G G
Sbjct: 752 --QLHGRVLALGLCCNPFVGSALVNHYMHVESPHAALSLFRELPLQNTAMCNVVLRGLGN 809
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG-LVNEGRRIFDMMVREFRIEPQM 549
L E + F +M + +G+++ + C G + +GR++ ++++ I +
Sbjct: 810 LKLTEELICCFLDMRRQYLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNI 869
Query: 550 EHYACMVDLLGRAGLLQEASDIVK--NMPMEPNAYVWGTLLN 589
+VDL G ++ D VK N + + W ++L+
Sbjct: 870 FLSNSLVDLYSAIG---DSVDTVKALNDILSEDVISWNSILS 908
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 361 bits (927), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 229/693 (33%), Positives = 347/693 (50%), Gaps = 105/693 (15%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L +LS+ RFG ++ A VF P + WN ++ G E AL LY +M
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMP---ERDVFSWNVMVGGYGKVGFLEEALDLYYRML 189
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
G+ D +TFP V+R C + +R G+ VH HVL+ GF V ++N L+ MYAK
Sbjct: 190 WAGMRPDVYTFPCVLRTCGGIPDWRM----GREVHAHVLRFGFGDEVDVLNALVTMYAKC 245
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G + + K+FD + V + ISWN M +G N +C+ LELF M ++PN +T TS+
Sbjct: 246 GDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVT 305
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
+ G L EVG K +HGF +K GF
Sbjct: 306 VA---SGMLS--------------EVG------------------FAKEMHGFAVKRGFA 330
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
V N+LI +Y G + A +FS +E K+ +SW A+I+ Y + G D+A+EV++ +
Sbjct: 331 IDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALM 390
Query: 365 E----------------------KLDGG----------SMERPNVISWSAVIGAFASNGR 392
E +LD G R V++ +A++ +A +
Sbjct: 391 ELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVA-NALLEMYAKSKH 449
Query: 393 GEEALDLFRKM------------------------------QLAKVVANSVTISGLLSVC 422
++A+++F+ M L V NSVT LS C
Sbjct: 450 IDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPNSVTFIAALSAC 509
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A + AL G+EIH +V+R + V N LL++Y+KCG F +KD+++WN
Sbjct: 510 AATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWN 569
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
M+SG+ +GLG+ AL+ F +M+E G PD V FVA+L ACS AG+V +G +F MM +
Sbjct: 570 IMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEK 629
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
F I P ++HYACMVDLL R G L EA +++ MP++P+A VWG LLN CR+H++ ++ E
Sbjct: 630 FSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGEL 689
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
A I L ++LL ++Y +G+W A+VR + + KGL++ G SW+EVK H
Sbjct: 690 AAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTH 749
Query: 663 MFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
F + + +K + VL + +M+ G P
Sbjct: 750 AFLTDDESHPQIKEINVVLHGIYERMKACGFAP 782
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 361 bits (927), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 229/693 (33%), Positives = 347/693 (50%), Gaps = 105/693 (15%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L +LS+ RFG ++ A VF P + WN ++ G E AL LY +M
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMP---ERDVFSWNVMVGGYGKVGFLEEALDLYYRML 189
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
G+ D +TFP V+R C + +R G+ VH HVL+ GF V ++N L+ MYAK
Sbjct: 190 WAGMRPDVYTFPCVLRTCGGIPDWRM----GREVHAHVLRFGFGDEVDVLNALVTMYAKC 245
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G + + K+FD + V + ISWN M +G N +C+ LELF M ++PN +T TS+
Sbjct: 246 GDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVT 305
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
+ G L EVG K +HGF +K GF
Sbjct: 306 VA---SGMLS--------------EVG------------------FAKEMHGFAVKRGFA 330
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
V N+LI +Y G + A +FS +E K+ +SW A+I+ Y + G D+A+EV++ +
Sbjct: 331 IDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALM 390
Query: 365 E----------------------KLDGG----------SMERPNVISWSAVIGAFASNGR 392
E +LD G R V++ +A++ +A +
Sbjct: 391 ELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVA-NALLEMYAKSKH 449
Query: 393 GEEALDLFRKM------------------------------QLAKVVANSVTISGLLSVC 422
++A+++F+ M L V NSVT LS C
Sbjct: 450 IDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGHVKPNSVTFIAALSAC 509
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A + AL G+EIH +V+R + V N LL++Y+KCG F +KD+++WN
Sbjct: 510 AATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWN 569
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
M+SG+ +GLG+ AL+ F +M+E G PD V FVA+L ACS AG+V +G +F MM +
Sbjct: 570 IMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEK 629
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
F I P ++HYACMVDLL R G L EA +++ MP++P+A VWG LLN CR+H++ ++ E
Sbjct: 630 FSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGEL 689
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
A I L ++LL ++Y +G+W A+VR + + KGL++ G SW+EVK H
Sbjct: 690 AAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTH 749
Query: 663 MFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
F + + +K + VL + +M+ G P
Sbjct: 750 AFLTDDESHPQIKEINVVLHGIYERMKACGFAP 782
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 361 bits (927), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 191/578 (33%), Positives = 319/578 (55%), Gaps = 64/578 (11%)
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ VH+ ++ + N + +L+ YA + ++ + K+FD++ +N I N+M + N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
+++F M + P+ T+
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTF----------------------------------- 143
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
VL C+ +G+ IHG K G +FV N L+ +YGK G + A+ + E+
Sbjct: 144 PCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKL----DGGSME------------------ 373
+++VSWN+L+ YA+ D+A+EV ++E + D G+M
Sbjct: 204 RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVK 263
Query: 374 -------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
+ +++SW+ +IG + N EA++L+ +M+ ++V+I+ +L C +++
Sbjct: 264 DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
AL++G++IHG++ R + N+L++N L++MY KCGCLE+ VFE ++ +D+++W +MIS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
YG +G G +A+A F ++ ++G PD +AFV L+ACSHAGL+ EGR F +M ++I
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
P++EH ACMVDLLGRAG ++EA +++M MEPN VWG LL +CR+H +TD+ A +
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 607 IFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSS 666
+F L E +G Y+LLSNIYA +GRWE+ +R K+KGLKK G S +EV R IH F
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLV 563
Query: 667 GNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G+ + L+ L +M+ G VPD++ L ++
Sbjct: 564 GDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDV 601
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 198/401 (49%), Gaps = 44/401 (10%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
+L I L+ VH+++I+ ++ L +++ YA + AR VF+ P +
Sbjct: 47 QVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIP---ER 103
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ ++ N ++R V+NG Y +K++ M V D +TFP V++AC G+ G
Sbjct: 104 NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTI----VIG 159
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ +H ++G + + N L+ MY K G +S++ + D++ ++ +SWN + G+A N
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQN 219
Query: 216 FDCDGALELFKRME----------LEGLEP-----------------------NFVTWTS 242
D ALE+ + ME + L P + V+W
Sbjct: 220 QRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNV 279
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
++ + + E ++L+ M G E A +I VL C D +A +GK IHG++ +
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
+ ++NALI +Y K G ++ A+++F ++ +++VSW A+I++Y +G +AV +FS
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+L+ D G + P+ I++ + A + G EE F+ M
Sbjct: 400 KLQ--DSGLV--PDSIAFVTTLAACSHAGLLEEGRSCFKLM 436
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 149/341 (43%), Gaps = 42/341 (12%)
Query: 34 FDHLLQQCKTIHQLKQVHN-----QLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
FD L+ C+ + +K H+ L+ +N + V ++ + G
Sbjct: 222 FDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMG----------- 270
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
K S + WN ++ V + N + A++LY +M G D + V+ AC +
Sbjct: 271 -----KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
S G+ +H ++ + N+ + N LI MYAK G + + +F+ ++ ++ +SW M
Sbjct: 326 ----SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAM 381
Query: 209 FSGFALN-FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR- 266
S + + CD A+ LF +++ GL P+ + + + L++ + G LEE F +M
Sbjct: 382 ISAYGFSGRGCD-AVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHY 440
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKV--IHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
I E +A ++ + GKV + F+ E V AL+ H D
Sbjct: 441 KITPRLEHLACMVDLLG-----RAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTD 495
Query: 325 V----AQNLFSEIEEKNIVSWNALITS-YAEAGLCDEAVEV 360
+ A LF E++ + L+++ YA+AG +E +
Sbjct: 496 IGLLAADKLFQLAPEQS--GYYVLLSNIYAKAGRWEEVTNI 534
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 361 bits (927), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 205/647 (31%), Positives = 339/647 (52%), Gaps = 48/647 (7%)
Query: 59 ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
N + L R++ + G AR +F+ P + ++++ ++GL A+K
Sbjct: 94 TNIPSHLGLRLIRVALNVGDFNRARQLFDNIP---QPDPTTCSTLISALTTHGLSNEAIK 150
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMG-SFRFRFSFGQIVHNHVLQMGFQGNVHIVNEL 177
+Y +++ G+ D F +AC G + R + VH+ + G +V + N L
Sbjct: 151 IYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKE-----VHDDATRCGVMSDVFVGNAL 205
Query: 178 IGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNF 237
I Y K + + ++FD + V++ +SW
Sbjct: 206 IHAYGKCKCVEGARRVFDDLVVRDVVSW-------------------------------- 233
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
TSL S + +CG + MD+F M G++ ++ +L CA+L GK IHGF
Sbjct: 234 ---TSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGF 290
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
++ G +FV +AL+ +Y K V+ A+ +F + +++VSWN ++T+Y + ++
Sbjct: 291 AVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKG 350
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
+F ++ + DG R + +W+AVIG NGR EEA+++FRKMQ N +TIS
Sbjct: 351 FSLFLKMSR-DG---VRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISS 406
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
+L C+ S L +G+EIH +V R ++ LL MY KCG L VF+ + +KD
Sbjct: 407 ILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKD 466
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
++ WN+MI M+G G+ AL F++M+ + +P+ V F VLS CSH+ LV EG +IF+
Sbjct: 467 VVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFN 526
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNT 597
M R+ +EP HY+C+VD+ RAG L EA ++ MPMEP A WG LL +CR++KN
Sbjct: 527 SMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNV 586
Query: 598 DVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
++A+ A ++F + G+Y+ L NI + W +A++VRI K +G+ K G SW++V
Sbjct: 587 ELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQV 646
Query: 658 KRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
K+H F G+ + + L+EL +M+ G PD D +L ++
Sbjct: 647 GNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDI 693
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/534 (22%), Positives = 229/534 (42%), Gaps = 97/534 (18%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
++K+VH+ G + F+ ++ Y + + AR VF+ + W S+
Sbjct: 182 RVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDL---VVRDVVSWTSLSS 238
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
V G + ++ +M GV + T ++ AC + + G+ +H ++
Sbjct: 239 CYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK----SGKEIHGFAVRH 294
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
G N+ + + L+ +YAK + ++ +FD + ++ +SWN + + + N + + LF
Sbjct: 295 GMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLF 354
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
+M +G+ + TW +++ GR EE +++F M+K G + I+ +L C+
Sbjct: 355 LKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFS 414
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
MGK IH +V + + AL+ +Y K GD+ +++N+F + K++V+WN +I
Sbjct: 415 ENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMI 474
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+ A G G+EAL LF KM L
Sbjct: 475 IANAMHG---------------------------------------NGKEALFLFDKMLL 495
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ------NGLLNMYMK 459
++V NSVT +G+LS C+ S + G +I SM ++ LV+ + ++++Y +
Sbjct: 496 SRVQPNSVTFTGVLSGCSHSRLVEEGVQIFN-----SMGRDHLVEPDANHYSCVVDIYSR 550
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
G L E + I G M +P A+ A+
Sbjct: 551 AGRLNEAY---------------KFIQGMPM-------------------EPTASAWGAL 576
Query: 520 LSACSHAGLVNEGRRIFDMMVRE-FRIEPQME-HYACMVDLLGRAGLLQEASDI 571
L+AC V + + + ++ F IEP +Y + ++L A + EAS +
Sbjct: 577 LAACR----VYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQV 626
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 165/365 (45%), Gaps = 50/365 (13%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPF-- 91
+L C + LK ++H + G + F+ + ++S+YA+ + +AR VF+ P
Sbjct: 271 ILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRD 330
Query: 92 ------------------------------DCKSSSLLWNSILRVNVSNGLYENALKLYV 121
++ WN+++ + NG E A++++
Sbjct: 331 VVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFR 390
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
KM+K+G + T ++ AC F + R G+ +H +V + G++ L+ MY
Sbjct: 391 KMQKMGFKPNEITISSILPACSFSENLR----MGKEIHCYVFRHWKVGDLTSTTALLYMY 446
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
AK G ++ S +FD +R K+ ++WN M A++ + AL LF +M L ++PN VT+T
Sbjct: 447 AKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFT 506
Query: 242 SLLSSHARCGRLEETMDLFDMM-RKRGIEVGAEAIAVVLSVCADLAA-DHMGKVIHGFVI 299
+LS + +EE + +F+ M R +E A + V+ + + + K I G +
Sbjct: 507 GVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPM 566
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKV----AQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
E AL+ + +V++ A+ LF EIE N ++ +L A +
Sbjct: 567 ----EPTASAWGALLAACRVYKNVELAKISAKKLF-EIEPNNPGNYVSLFNILVTAKMWS 621
Query: 356 EAVEV 360
EA +V
Sbjct: 622 EASQV 626
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 213/742 (28%), Positives = 379/742 (51%), Gaps = 119/742 (16%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F+ L C ++ K++H L+V G + + L+ +++++Y G + +R+ F+ +
Sbjct: 25 FNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFD---YIH 81
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG----DGFTFPLVIRACKFMGSFR 149
K + WNSI+ V G Y A+ ++ + G D +TFP +++AC +
Sbjct: 82 KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD-- 139
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+ VH V +MGF+ +V + L+ +Y++ G + + K+F + VK+ SWN M
Sbjct: 140 -----GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMI 194
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTS--------------------------- 242
SGF N + GAL + RM+ EG++ + +T S
Sbjct: 195 SGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLD 254
Query: 243 --------LLSSHARCGRLEETMDLFDMMRKR---------------------------- 266
L++ +++ GRL++ +FD M R
Sbjct: 255 SDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGM 314
Query: 267 ---GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY-VFVKNALICVYGKHGD 322
GI + + S+ + L+ + + I GFVI+ + D V + NAL+ +Y K G
Sbjct: 315 QLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGY 374
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
+ A +F ++ K+ +SWN L+T Y + GL EA++ ++ +E+ PN +W +
Sbjct: 375 MNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRD---TIPNQGTWVS 431
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS 442
+I A++ G AL G +IH +++ S
Sbjct: 432 IIPAYSHVG-----------------------------------ALQQGMKIHAKLIKNS 456
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFE 502
+ ++ V L+++Y KCG LE+ +F +I + + WN++I+ G++G GE AL F+
Sbjct: 457 LYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFK 516
Query: 503 EMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRA 562
+M+ K D + FV++LSACSH+GLV+EG++ FD+M +E+ I+P ++HY CMVDLLGRA
Sbjct: 517 DMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRA 576
Query: 563 GLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLS 622
G L++A ++V+NMP++P+A +WG LL++C+++ N ++ + ++ + +E G Y+LLS
Sbjct: 577 GYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLS 636
Query: 623 NIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLE 682
NIYA + +WE KVR A+ +GL+K G S + V K +F +GN + + L+
Sbjct: 637 NIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELK 696
Query: 683 ELALQMENKGCVPDNDIILWEM 704
L+ +M++ G VPD + ++
Sbjct: 697 VLSAKMKSLGYVPDYSFVYQDI 718
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 29 SLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
S++ + H+ + Q ++H +LI F+A ++ +Y + GRL DA ++F
Sbjct: 431 SIIPAYSHV----GALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYE 486
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
P D +S+ WN+I+ +G E AL+L+ M V D TF ++ AC G
Sbjct: 487 IPRD---TSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSG 541
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 212/737 (28%), Positives = 366/737 (49%), Gaps = 115/737 (15%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + L KQVH ++V+G F+A ++ +YA+ D++ +F+ P
Sbjct: 160 FSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIP 219
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + WN++ V A+ L+ +M G+ + F+ ++ AC +
Sbjct: 220 ---ERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDS-- 274
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
S G+I+H +++++G+ + N L+ MYAK+G ++D+ +F+K++ + +SWN + +
Sbjct: 275 --SRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIA 332
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS------------------------ 246
G L+ + ALEL +M+ G+ PN T +S L +
Sbjct: 333 GCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMES 392
Query: 247 -----------HARCGRLEETMDLFDMM-------------------------------R 264
+++C LE+ F+++
Sbjct: 393 DLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMH 452
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
K GI ++ +L A L H+ + +HG +K GF ++V N+LI YGK V+
Sbjct: 453 KEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVE 512
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A+ +F E ++VS+ ++IT+YA+ G +EA
Sbjct: 513 DAERIFEECTIGDLVSFTSMITAYAQYGQGEEA--------------------------- 545
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
L LF +MQ ++ + S LL+ CA +A G+++H H+++
Sbjct: 546 ------------LKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFV 593
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
+I N L+NMY KCG +++ F ++ ++ +++W++MI G +G G AL F +M
Sbjct: 594 LDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQM 653
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
++ G P+ + V+VL AC+HAGLV E + F+ M F +P EHYACM+DLLGRAG
Sbjct: 654 LKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGK 713
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNI 624
+ EA ++V MP E NA VWG LL + R+HK+ ++ A +F L E +G+++LL+NI
Sbjct: 714 INEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANI 773
Query: 625 YAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
YA++G+WE+ A+VR + +KK G SWIEVK K++ F G+ + + L+EL
Sbjct: 774 YASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDEL 833
Query: 685 ALQMENKGCVPDNDIIL 701
+ M+ G VP +I L
Sbjct: 834 SDLMDKAGYVPMVEIDL 850
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 170/697 (24%), Positives = 305/697 (43%), Gaps = 136/697 (19%)
Query: 3 HSLLHQPHQFSPS--NPSRPFSIITYNNSLLDCFDH------------LLQQCKTIHQLK 48
H LH P + +P FS ++L+ D LL QC T L+
Sbjct: 14 HQRLHLPFKPAPKLIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLR 73
Query: 49 ---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN-VFETAPFDCKSSSLLWNSIL 104
Q+H + +G + + ++++Y++ AR V E++ D S W++++
Sbjct: 74 PGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVS----WSALI 129
Query: 105 RVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
NGL AL + +M LGV + FTF V++AC + R G+ VH V+
Sbjct: 130 SGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLR----IGKQVHGVVVV 185
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
GF+G+V + N L+ MYAK + DS +LFD++ +N +SWN +FS + C A+ L
Sbjct: 186 SGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGL 245
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
F M L G++PN + +S++++ C
Sbjct: 246 FYEMVLSGIKPNEFSLSSMVNA-----------------------------------CTG 270
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
L GK+IHG++IK G++ F NAL+ +Y K GD+ A ++F +I++ +IVSWNA+
Sbjct: 271 LRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAV 330
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
I ++A+E+ Q+++
Sbjct: 331 IAGCVLHEHHEQALELLGQMKR-------------------------------------- 352
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
+ + N T+S L CA +GR++H ++++ M ++ V GL++MY KC LE
Sbjct: 353 -SGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLE 411
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
+ + F + +KDLI WN++ISGY AL+ F EM + G + +L + +
Sbjct: 412 DARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTA 471
Query: 525 HAGLVNEGRRIFDMMVRE------FRIEPQMEHYA------------------------C 554
+V+ R++ + V+ + + ++ Y
Sbjct: 472 GLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTS 531
Query: 555 MVDLLGRAGLLQEASDI---VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI--FG 609
M+ + G +EA + +++M ++P+ +V +LLN+C + + + I +G
Sbjct: 532 MITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYG 591
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
+ + L+ N+YA G +DA + +G+
Sbjct: 592 FVLDIFAGNSLV-NMYAKCGSIDDAGRAFSELTERGI 627
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 210/488 (43%), Gaps = 78/488 (15%)
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
F++ + L F L+ + + + +T + +++ K + + + +LS C
Sbjct: 9 FQKPLHQRLHLPFKPAPKLIQTVPQFSQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCT 68
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
+ G IH + K G D ++N LI +Y K + A+ L E E
Sbjct: 69 TKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSE--------- 119
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
P+++SWSA+I +A NG G AL F +M
Sbjct: 120 ------------------------------PDLVSWSALISGYAQNGLGGGALMAFHEMH 149
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
L V N T S +L C+ L IG+++HG VV ++ V N L+ MY KC
Sbjct: 150 LLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFL 209
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
+ +F++I ++++++WN++ S Y A+ F EM+ +G KP+ + ++++AC+
Sbjct: 210 DSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT 269
Query: 525 HAGLVNEGRRIFDMMVR-EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
+ G+ I +++ + +P + +VD+ + G L +A + + + +P+
Sbjct: 270 GLRDSSRGKIIHGYLIKLGYDWDPFSAN--ALVDMYAKVGDLADAISVFEKIK-QPDIVS 326
Query: 584 WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKT 643
W ++ C +H++ + A + Q+ + +G + NI+ S
Sbjct: 327 WNAVIAGCVLHEHHEQALELLGQM-----KRSG---ICPNIFTLS--------------- 363
Query: 644 KGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL---------KNVCEVLEELALQMENKGCV 694
LK AG E+ R++H ++SDL + C++LE+ + +
Sbjct: 364 SALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAF---NLL 420
Query: 695 PDNDIILW 702
P+ D+I W
Sbjct: 421 PEKDLIAW 428
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 157/344 (45%), Gaps = 20/344 (5%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
I +N + L + +H +QVH + +G ++ ++ ++ Y + + DA
Sbjct: 456 IGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAE 515
Query: 84 NVFETAPFDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
+FE +C L+ + S++ G E ALKL+++M+ + + D F ++ AC
Sbjct: 516 RIFE----ECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNAC 571
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ +F G+ +H H+L+ GF ++ N L+ MYAK G + D+ + F ++ +
Sbjct: 572 ANLSAFE----QGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI 627
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
+SW+ M G A + AL+LF +M EG+ PN +T S+L + G + E F+
Sbjct: 628 VSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFES 687
Query: 263 MRKR-GIEVGAEAIAVVLSVCADLAADHMGKVIHG--FVIKGGFEDYVFVKNALICVYGK 319
M + G + E A ++ + GK+ V K FE V AL+
Sbjct: 688 MEELFGFKPMQEHYACMIDLLG-----RAGKINEAVELVNKMPFEANASVWGALLGAARI 742
Query: 320 HGDVKV---AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
H DV++ A + +E + + L YA AG + EV
Sbjct: 743 HKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEV 786
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 361 bits (927), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 231/717 (32%), Positives = 375/717 (52%), Gaps = 59/717 (8%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++++ C ++ + VHN G + F+ + ++ +YA G + DAR VF+ P
Sbjct: 148 FPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELP 207
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ ++LWN +L V +G + NA+ + MR + + T+ ++ C + R
Sbjct: 208 ---QRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSIC----ATRG 260
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+F G VH V+ GF+ + + N L+ MY+K G + D+ KLF+ + + ++WN + +
Sbjct: 261 KFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIA 320
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDL----------F 260
G+ N D A LF M G++P+ VT+ S L S G L ++ F
Sbjct: 321 GYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPF 380
Query: 261 DMMRKRGI--------------EVGAEAIAVVLSVCADLAADHMGKVIHG---------- 296
D+ K + ++ + V ++VC + + G V+HG
Sbjct: 381 DVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMIS---GYVLHGLNIDAINTFR 437
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK---NIVSWNALITS-YAEAG 352
++I+ G +++ +K+ + L +I +K NIV+ + IT YA+ G
Sbjct: 438 WLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCG 497
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
D A E F ++ + D I W+++I +F+ NG+ E A+DLFR+M ++ +S
Sbjct: 498 RLDLAYEFFRRMSETDS--------ICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDS 549
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
V++S LS A AL G+E+HG+V+R + + + V + L++MY KCG L VF
Sbjct: 550 VSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNL 609
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+ K+ ++WNS+I+ YG +G L F EM+ AG PD V F+ ++SAC HAGLV EG
Sbjct: 610 MAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEG 669
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
F M RE+ I +MEHYACMVDL GRAG L EA D +K+MP P+A VWGTLL +CR
Sbjct: 670 IHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACR 729
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
+H N ++A+ + + L + +G Y+LLSN++A +G W KVR K KG++K+ G
Sbjct: 730 LHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPGY 789
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKN 709
SWI+V HMFS+ + + +L L L++ +G VP + L + N
Sbjct: 790 SWIDVNGGTHMFSAAEGNHPESVEIYLILNSLLLELRKQGYVPQPYLPLHPQITGNN 846
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 149/577 (25%), Positives = 264/577 (45%), Gaps = 86/577 (14%)
Query: 34 FDHLLQQCK---TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ L + C + Q +QVH Q+IV G + L++RVL +Y GR+ D N+F
Sbjct: 47 LESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLE 106
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
++L WN ++R G ++ AL Y KM V D +TFP VI+AC + +
Sbjct: 107 L---CNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNN--- 160
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+VHN +GF ++ + + LI +YA G + D+ ++FD++ ++ I WN+M
Sbjct: 161 -VPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLH 219
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
G+ + D + A+ F M N VT+T
Sbjct: 220 GYVKSGDFNNAMGTFCGMRTSYSMVNSVTYT----------------------------- 250
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+LS+CA +G +HG VI GFE V N L+ +Y K G++ A+ LF
Sbjct: 251 ------CILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLF 304
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+ + + + V+WN LI Y + G DEA
Sbjct: 305 NTMPQTDTVTWNGLIAGYVQNGFTDEAAP------------------------------- 333
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
LF M A V +SVT + L ES +L +E+H ++VR + ++ ++
Sbjct: 334 --------LFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLK 385
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
+ L+++Y K G +E +F+Q D+ +MISGY ++GL +A+ TF +I+ G
Sbjct: 386 SALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMV 445
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
P+ + +VL AC+ + G+ + ++++ ++E + + + D+ + G L A +
Sbjct: 446 PNSLTMASVLPACAALAALKLGKELHCDILKK-QLENIVNVGSAITDMYAKCGRLDLAYE 504
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
+ M E ++ W ++++S + ++A + Q+
Sbjct: 505 FFRRMS-ETDSICWNSMISSFSQNGKPEMAVDLFRQM 540
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
+ + L C++++ + R++H ++ M+ + + +L +Y+ CG + +G +F
Sbjct: 44 TTQLESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFF 103
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
+E + + WN MI G M G + AL + +M+ + PD F V+ AC GL N
Sbjct: 104 GLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKAC--GGLNNV 161
Query: 532 GR-RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
+ R + + ++ L G + +A + +P + + +W +L+
Sbjct: 162 PLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELP-QRDTILWNVMLHG 220
Query: 591 CRMHKNTDVAEAMAS 605
K+ D AM +
Sbjct: 221 --YVKSGDFNNAMGT 233
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 217/650 (33%), Positives = 345/650 (53%), Gaps = 84/650 (12%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFDCKSSSLLWNS 102
+ + K+VH ++ G + + +++ Y + G + AR +F E + D S WNS
Sbjct: 174 VRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVS----WNS 229
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
++ NG N L+ +++M LGV D T V+ AC +G+ + G+ +H +
Sbjct: 230 MISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNL----TLGRALHAYG 285
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
++ GF G V N L+ MY+K G + +GA
Sbjct: 286 VKAGFSGGVMFNNTLLDMYSKCGNL-------------------------------NGAN 314
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC 282
E+F +M E V+WTS++++H R G E + LFD M+ +G+ A+ V+ C
Sbjct: 315 EVFVKMG----ETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHAC 370
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
A + G+ +H + K N+ S N+ N
Sbjct: 371 ACSNSLDKGREVHNHIKK--------------------------NNMGS-----NLPVSN 399
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
AL+ YA+ G +EA +FSQL N++SW+ +IG ++ N EAL LF
Sbjct: 400 ALMNMYAKCGSMEEANLIFSQLP--------VKNIVSWNTMIGGYSQNSLPNEALQLFLD 451
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
MQ ++ + VT++ +L CA AAL GREIHGH++R ++ V L++MY+KCG
Sbjct: 452 MQ-KQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGL 510
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
L +F+ I KKD+I W MI+GYGM+G G+ A++TFE+M AG +P+ +F ++L A
Sbjct: 511 LVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYA 570
Query: 523 CSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAY 582
C+H+GL+ EG ++FD M E IEP++EHYACMVDLL R+G L A ++ MP++P+A
Sbjct: 571 CTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAA 630
Query: 583 VWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAK 642
+WG LL+ CR+H + ++AE +A IF L E T Y+LL+N+YA + +WE+ K++
Sbjct: 631 IWGALLSGCRIHHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRIS 690
Query: 643 TKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
GLK G SWIEV+ K ++F +G++ K + +L +L ++M G
Sbjct: 691 KGGLKNDQGCSWIEVQGKFNIFFAGDTSHPQAKMIDSLLRKLTMKMNRGG 740
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 123/551 (22%), Positives = 230/551 (41%), Gaps = 105/551 (19%)
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
G L M L ++ +E+ VL +CA+L + GK +H + G +
Sbjct: 38 GDLRNAMKLLSRSQRSELEL--NTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLG 95
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD-- 368
L+ +Y GD+ + +F I I WN L++ YA+ G E+V +F ++++L
Sbjct: 96 AKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIR 155
Query: 369 GGSMERPNVI-------------------------SWSAV----IGAFASNGRGEEALDL 399
G S V+ S++AV I A+ G E A L
Sbjct: 156 GDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARIL 215
Query: 400 FRKMQLAKVVANSVTISG-------------------------------LLSVCAESAAL 428
F ++ VV+ + ISG +L CA L
Sbjct: 216 FDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNL 275
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+GR +H + V+ + ++ N LL+MY KCG L + VF ++ + +++W S+I+ +
Sbjct: 276 TLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAH 335
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
GL A+ F+EM G +PD A +V+ AC+ + +++GR + + +++ +
Sbjct: 336 VREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHN-HIKKNNMGSN 394
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
+ ++++ + G ++EA+ I +P++ N W T++ +N+ EA+ Q+F
Sbjct: 395 LPVSNALMNMYAKCGSMEEANLIFSQLPVK-NIVSWNTMIGG--YSQNSLPNEAL--QLF 449
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
+ + + +D + L AG + +E R+IH
Sbjct: 450 LDMQKQL--------------KPDDVTMACV------LPACAGLAALEKGREIHGHILRK 489
Query: 669 SLQSDLKNVCEVLEE------LALQMENKGCVPDNDIILWEMM---------GKKNVKRI 713
SDL C +++ L L + +P D+ILW +M GK+ +
Sbjct: 490 GYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTF 549
Query: 714 QRIRADNIKSK 724
+++R I+ +
Sbjct: 550 EKMRVAGIEPE 560
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 257/890 (28%), Positives = 423/890 (47%), Gaps = 149/890 (16%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
L Q C + Q+H+Q+ TG F A ++ S+YA+ L AR VF+ P +
Sbjct: 10 LFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETP---HPN 66
Query: 97 SLLWNSILRVNVSNGLYENALKLY-VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
LWNS LR +E L+L+ + + G D FT P+ ++AC R G
Sbjct: 67 VHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKAC---AGLRM-LELG 122
Query: 156 QIVHNHVLQMGFQG-NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
+++H + G ++ + + L+ +Y+K GQM ++ K+F++
Sbjct: 123 KVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEE------------------ 164
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAE 273
F+R P+ V WTS+++ + + EE + LF M+ + +
Sbjct: 165 ----------FQR-------PDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPV 207
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ------ 327
+ V+S CA L G +HG VI+ F+ + + N+L+ +Y K G K+A
Sbjct: 208 TLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKM 267
Query: 328 -------------------------NLFSEIEEK-------------------------- 336
NLF E+ EK
Sbjct: 268 PEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGK 327
Query: 337 ---NIVSW----------NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
I W ALI Y + DEAV++F +L K D V+SW A+
Sbjct: 328 KIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKD--------VVSWVAL 379
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
+ +A NG +++ +FR M + ++V + +L+ +E +HG+VVR
Sbjct: 380 LSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGF 439
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
N N+ V L+ +Y KCG L + +F+ + +D++ W+SMI+ YG++G G AL F++
Sbjct: 440 NSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQ 499
Query: 504 MIE-AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRA 562
M++ + +P+ V F+++LSACSHAGLV EG +IFD MV ++++ P EH+ MVDLLGR
Sbjct: 500 MVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRI 559
Query: 563 GLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLS 622
G L +A DI+ MP+ +VWG LL +CR+H N ++ EA A +F L G Y+LLS
Sbjct: 560 GQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLS 619
Query: 623 NIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLE 682
NIYA G+W++ A++R K +GLKK+ GQS +EV+ +H F + + D + + E+L
Sbjct: 620 NIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYELLR 679
Query: 683 ELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLS 742
+L QM + +PD D +L + ++ QRI+A +SK++ +G +
Sbjct: 680 KLEAQMGKEVYIPDLDFLLHDTGAV--LQFWQRIKA--TESKYKTIGSAPGTDTISCFSC 735
Query: 743 LRSTNGQLMKNKLKLGLVVFNLSLKLFNDAVTATNRVISSDIRLENDSPHGL-----VLL 797
L+ T+ ++ GL + L F + NR+ ++ I E D P+ V++
Sbjct: 736 LKKTHAKI----FAYGLQYDSRILTKFAIMYVSFNRIDAASIVFE-DIPNPCSFLWNVMI 790
Query: 798 RGLKVFDNFCNVTDTKQFMSVEELALAIMREIRGENAVRSALPALVFTCS 847
RG TD + F+S EL +M +G + A P + +C+
Sbjct: 791 RGF--------ATDGR-FLSSLELYSKMME--KGLKPDKFAFPFALKSCA 829
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/553 (31%), Positives = 280/553 (50%), Gaps = 74/553 (13%)
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
FS + H + G Q + I+ + MY ++ + +F+ + WN+M G
Sbjct: 733 FSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRG 792
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
FA + GR +++L+ M ++G++
Sbjct: 793 FATD-----------------------------------GRFLSSLELYSKMMEKGLKPD 817
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
A L CA L+ GKVIH ++ G + +FV AL+ +Y K GD++ A+ +F
Sbjct: 818 KFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFD 877
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
++ + +++SW+++I +A NG
Sbjct: 878 KMAVR---------------------------------------DLVSWTSMISGYAHNG 898
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
E L F M+ + V+ N V+I +L C AL G H +V++ +ILV
Sbjct: 899 YNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVAT 958
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
+++MY KCG L+ +F++ KDL+ W++MI+ YG++G G A+ F++M++AG +P
Sbjct: 959 AIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRP 1018
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
V F VLSACSH+GL+ EG+ F +M EF I ++ +YACMVDLLGRAG L EA D+
Sbjct: 1019 SHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDL 1078
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
++NMP+EP+A +WG+LL +CR+H N D+AE +A +F L G ++LLSNIYAA RW
Sbjct: 1079 IENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRW 1138
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
+ KVR +G K+ G S +E ++H F G+ + + LEELA M++
Sbjct: 1139 NEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHL 1198
Query: 692 GCVPDNDIILWEM 704
G VP D +L ++
Sbjct: 1199 GYVPLTDFVLHDI 1211
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 180/368 (48%), Gaps = 46/368 (12%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
LK+ H ++ G + + + +Y F R+ A VFE P C S LWN ++R
Sbjct: 736 LKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPC---SFLWNVMIRG 792
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
++G + ++L+LY KM + G+ D F FP +++C + + G+++H H++ G
Sbjct: 793 FATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQ----RGKVIHQHLVCCG 848
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
++ + L+ MYAK G + + +FDK+ V++ +SW M SG+A N L F
Sbjct: 849 CSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFD 908
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
M G+ PN V S+LS VL C +L
Sbjct: 909 LMRSSGVIPNRV---SILS--------------------------------VLLACGNLG 933
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
A G+ H +VI+ GFE + V A++ +Y K G + +A+ LF E K++V W+A+I
Sbjct: 934 ALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIA 993
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
SY G +A+++F Q+ K + RP+ ++++ V+ A + +G EE F+ M
Sbjct: 994 SYGIHGHGRKAIDLFDQMVK----AGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEE 1049
Query: 407 KVVANSVT 414
V+A ++
Sbjct: 1050 FVIARKLS 1057
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 121/237 (51%), Gaps = 12/237 (5%)
Query: 34 FDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET-A 89
F L+ C + L++ +H L+ G + F+ A ++ +YA+ G + AR VF+ A
Sbjct: 821 FPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMA 880
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
D S W S++ NG L + MR GV+ + + V+ AC +G+ R
Sbjct: 881 VRDLVS----WTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALR 936
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+ H++V+Q GF+ ++ + ++ MY+K G + + LFD+ K+ + W+ M
Sbjct: 937 K----GEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMI 992
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
+ + ++ A++LF +M G+ P+ VT+T +LS+ + G LEE F +M +
Sbjct: 993 ASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEE 1049
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 220/708 (31%), Positives = 355/708 (50%), Gaps = 107/708 (15%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L +++ +Y + G L +AR VF+ P S +W +++ G + L+ KM
Sbjct: 131 LGQKLVLMYLKCGDLENARRVFDEMPQ--VSDVRVWTALMSGYAKAGDLREGVLLFRKMH 188
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
GV D +T V++ +GS G++VH + ++GF + N L+ YAK
Sbjct: 189 CCGVRPDAYTISCVLKCIAGLGSI----EDGEVVHGLLEKLGFGSQCAVGNALMAFYAKS 244
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
+ D+ +FD + ++ ISWN S++
Sbjct: 245 NRTKDAILVFDGMPHRDVISWN-----------------------------------SMI 269
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
S G ++ ++LF M G E+ + + VL CA+L +G+V+HG+ +K GF
Sbjct: 270 SGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFI 329
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE-------AGLCDE- 356
+ N L+ +Y D + +F + +KN+VSW A+ITSY AGL E
Sbjct: 330 SQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEM 389
Query: 357 --------------AVEVFSQLEKLDGGS----------MER------------------ 374
A+ F+ E L G ME+
Sbjct: 390 GLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNM 449
Query: 375 ------------PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
++ISW+ +IG ++ N EA LF +M L ++ N+VT++ +L
Sbjct: 450 EEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEM-LLQLRPNAVTMTCILPAA 508
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A ++L GRE+H + +R ++ V N L++MY+KCG L +F+++ K+LI+W
Sbjct: 509 ASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWT 568
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
M++GYGM+G G +A+A FE+M +G PD +F A+L ACSH+GL +EG R FD M +E
Sbjct: 569 IMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKE 628
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
+IEP+++HY CMVDLL G L+EA + + +MP+EP++ +W +LL CR+H+N +AE
Sbjct: 629 HKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEE 688
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
+A ++F L E TG Y+LL+NIYA + RWE K++ +GL++ G SWIE K K+H
Sbjct: 689 VAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVH 748
Query: 663 MFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNV 710
+F + N + E L E+A +M+ +G P + +MG N
Sbjct: 749 VFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKK---YALMGADNA 793
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 152/338 (44%), Gaps = 20/338 (5%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K VH I G + ++ +Y + G + +A+ +F+ + WN+++
Sbjct: 418 KSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGV---VSKDMISWNTLIGGY 474
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
N L A L+ +M L + + T ++ A + S G+ +H + L+ G+
Sbjct: 475 SRNNLANEAFSLFTEM-LLQLRPNAVTMTCILPAAASLSSL----ERGREMHAYALRRGY 529
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ + N LI MY K G + + +LFD++ KN ISW +M +G+ ++ A+ LF++
Sbjct: 530 LEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQ 589
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M + G+ P+ +++++L + + G +E FD MRK E E + DL
Sbjct: 590 MRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRK---EHKIEPRLKHYTCMVDLLI 646
Query: 288 DHMG-KVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS---EIEEKNIVSWNA 343
+ K + F+ E + +L+ H +VK+A+ + E+E +N +
Sbjct: 647 NTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVL 706
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV-ISW 380
L YAEA E E +L+ GG R N SW
Sbjct: 707 LANIYAEA----ERWEAVRKLKNKIGGRGLRENTGCSW 740
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 101/230 (43%), Gaps = 16/230 (6%)
Query: 370 GSMERPNVISWSAV---IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
G+ + P+ + S V I +G EEAL L L + + +L +C+E
Sbjct: 51 GAEKSPDWVPTSDVNLHIQRLCRSGDLEEALGL-----LGSDGVDDRSYGAVLQLCSEVR 105
Query: 427 ALNIGREIHGHVVRVSMNK----NILVQNGLLNMYMKCGCLEEGHLVFEQIEK-KDLITW 481
+L G+ H V S+ + N+L Q L+ MY+KCG LE VF+++ + D+ W
Sbjct: 106 SLEGGKRAHFLVRASSLGRDGMDNVLGQK-LVLMYLKCGDLENARRVFDEMPQVSDVRVW 164
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
+++SGY G + F +M G +PD VL + G + +G + ++
Sbjct: 165 TALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLL-E 223
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
+ Q ++ ++ ++A + MP + W ++++ C
Sbjct: 224 KLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHR-DVISWNSMISGC 272
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 105/232 (45%), Gaps = 18/232 (7%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
++ + +++H + G F+A ++ +Y + G L AR +F+ + + W
Sbjct: 513 SLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLS---NKNLISWTI 569
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG----SFRFRFSFGQIV 158
++ +G +A+ L+ +MR G+ D +F ++ AC G +RF F +
Sbjct: 570 MVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRF---FDAMR 626
Query: 159 HNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMMFSGFALNFD 217
H ++ + +V+ LI G + ++++ D + ++ S W + G ++ +
Sbjct: 627 KEHKIEPRLKHYTCMVDLLI----NTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRN 682
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGI 268
A E+ +R+ E LEP + LL++ +A R E L + + RG+
Sbjct: 683 VKLAEEVAERV-FE-LEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGL 732
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 181/481 (37%), Positives = 284/481 (59%), Gaps = 12/481 (2%)
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
EPN ++++++ SH + + + M G+E A + VL C+ + GKV
Sbjct: 107 EPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSLES----GKV 162
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
+H IK G ++V+ L+ VY + GDV A+ LF ++ E+++VS ++T Y++ G
Sbjct: 163 LHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGE 222
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
D+A +F +++ D V+ W+ +IG +A +G E+L LFR+M +AK + N V
Sbjct: 223 LDKARSLFEGMKERD--------VVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEV 274
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
T+ +LS C + AL GR IH ++ + N+ V L++MY KCG LE+ LVF++I
Sbjct: 275 TVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRI 334
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
KD++ WNSMI GY M+G ++AL FEEM E G KP + F+ +LSAC H GLV EGR
Sbjct: 335 RDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGR 394
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRM 593
F +M ++ IEP++EHY CMV+LLGRAG L+EA +VKNM + + +WGTLL CR+
Sbjct: 395 SFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRL 454
Query: 594 HKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
H N + E +A + +G+Y+LLSN+YAA+G WE AK+R K G++K G S
Sbjct: 455 HVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCS 514
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRI 713
IEV K+H F +G K + +L E+ ++ +G P D++L ++ ++ + +
Sbjct: 515 SIEVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSL 574
Query: 714 Q 714
+
Sbjct: 575 E 575
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 200/410 (48%), Gaps = 37/410 (9%)
Query: 12 FSPSNPSRPFSIITYNNSL-----------------LDCFDHLLQQCKTIHQLKQVHNQL 54
F+ S+PS P SI T N S ++ F L+ + K++ L Q+H L
Sbjct: 12 FTASHPSPP-SIFTTNRSSVLPSSSSTARTSDRFQEVERFASLIDKSKSVAHLLQIHASL 70
Query: 55 IVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYE 114
+ G + L ++ YA GRL + VF T FD + + +++I+ +V + L++
Sbjct: 71 LRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNT--FD-EPNVFSFSAIIHSHVQSRLFD 127
Query: 115 NALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIV 174
A Y +M GV + FTF V+++C G+++H +++G ++++
Sbjct: 128 RAFGYYSQMLSCGVEPNAFTFSSVLKSCSLES--------GKVLHCQAIKLGLGSDLYVR 179
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
L+ +YA+ G + + +LFDK+ ++ +S M + ++ + D A LF+ M+ E
Sbjct: 180 TGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMK----E 235
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
+ V W ++ +A+ G E++ LF M + VLS C L A G+ I
Sbjct: 236 RDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWI 295
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
H ++ G + V V ALI +Y K G ++ A+ +F I +K++V+WN++I YA G
Sbjct: 296 HSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFS 355
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
A+++F ++ + + +P I++ ++ A G EE FR M+
Sbjct: 356 QHALQLFEEMTE----TGHKPTDITFIGILSACGHGGLVEEGRSFFRLMR 401
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 42/285 (14%)
Query: 26 YNNSLLDC--------FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFG 77
Y + +L C F +L+ C ++ K +H Q I G + ++ ++ +YAR G
Sbjct: 132 YYSQMLSCGVEPNAFTFSSVLKSC-SLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGG 190
Query: 78 RLFDARNVFETAP----------FDC--------KSSSLL----------WNSILRVNVS 109
+ AR +F+ P C K+ SL WN ++
Sbjct: 191 DVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQ 250
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
+G+ +LKL+ +M + + T V+ AC +G+ G+ +H+++ G Q
Sbjct: 251 SGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALES----GRWIHSYIENKGIQI 306
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
NVH+ LI MY+K G + D+ +FD++R K+ ++WN M G+A++ AL+LF+ M
Sbjct: 307 NVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMT 366
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGIEVGAE 273
G +P +T+ +LS+ G +EE F +MR K GIE E
Sbjct: 367 ETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIE 411
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 216/700 (30%), Positives = 365/700 (52%), Gaps = 85/700 (12%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFG------RLFD--- 81
F LL QC ++ +VH +I + + F+ R++ +Y + G +LFD
Sbjct: 22 FSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRML 81
Query: 82 ARNVFETAPFDC--KSSSLL-----------------WNSILRVNVSNGLYENALKLYVK 122
RN+F C S L WNS++ +G ++ AL + +
Sbjct: 82 ERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQ 141
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M G L + ++F + AC + + G +H+ V + + +V++ + L+ MY+
Sbjct: 142 MHGHGFLVNEYSFGSALSACAGLQDLKL----GSQIHSLVYRSNYLSDVYMGSALVDMYS 197
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K G++ + +FD++ V++ +SWN S
Sbjct: 198 KCGRVEYAQSVFDEMTVRSRVSWN-----------------------------------S 222
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK-G 301
L++ + + G ++E + +F M K G+E +A V+S CA ++A G+ IH V+K
Sbjct: 223 LITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCD 282
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
F + + + NAL+ +Y K + A+ +F + +++VS ++++ YA+A A +F
Sbjct: 283 EFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMF 342
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
S +M +VI+W+A+I NG EEAL LFR ++ V T LL+
Sbjct: 343 S--------NMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNA 394
Query: 422 CAESAALNIGREIHGHVVR------VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
CA A L +GR+ H HV++ + ++ V N L++MYMKCG +E G VF+ + +
Sbjct: 395 CANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLE 454
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
KD ++WN+MI GY NG G AL F +M+E+G PD V + VL ACSHAGL++EGR
Sbjct: 455 KDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYY 514
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
F M + + P +HY CMVDLLGRAG L+EA ++++ M M+P+A VWG+LL +C++H+
Sbjct: 515 FRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHR 574
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
N + E + ++ + E +G Y+LLSN+YA + W++ +VR + +G+ K G SWI
Sbjct: 575 NIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSWI 634
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
E++ ++++F + + K + VL + QM+ G VP
Sbjct: 635 EIQGELNVFMVKDKRHARKKEIYMVLRTILQQMKQAGYVP 674
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 35/224 (15%)
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC-------- 462
+S S LL+ CA S + +H +++ +QN L+++Y KCGC
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
Query: 463 -----------------------LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
L++ +FE++ + D +WNSMISG+ +G + AL
Sbjct: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
F +M GF + +F + LSAC+ + G +I ++ R + A +VD+
Sbjct: 138 YFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSA-LVDMY 196
Query: 560 GRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+ G ++ A + M + W +L+ +C +N V EA+
Sbjct: 197 SKCGRVEYAQSVFDEMTVRSRV-SWNSLI-TC-YEQNGPVDEAL 237
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 189/586 (32%), Positives = 324/586 (55%), Gaps = 56/586 (9%)
Query: 116 ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVN 175
AL Y MRKL + D F P V++AC + R G+ +H ++ G +V +VN
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARM----GKEIHGFSVKNGLVSDVFVVN 148
Query: 176 ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
L+ MY++ G + + LFDK+ ++ +SW+ M + + LF +
Sbjct: 149 ALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAY---------ITLFYGFS----QR 195
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
+ V+WT++++ + RC LEE LF M + + + ++ C + A +GK +H
Sbjct: 196 SIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLH 255
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
++++ GF + + AL+ +YGK G+++ A+ +F
Sbjct: 256 AYILRNGFGMSLALATALVDMYGKCGEIRSARAIFD------------------------ 291
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
SM+ +V++W+A+I A+A + A LF +M+ V N +T+
Sbjct: 292 ---------------SMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTM 336
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
LLS+CA + AL++G+ H ++ + + +++++ L++MY KCG + +F +
Sbjct: 337 VSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAID 396
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
+D+ TWN M++GYGM+G GE AL F EM G KP+ + F+ L ACSHAGLV EG+ +
Sbjct: 397 RDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGL 456
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
F+ M+ +F + P++EHY CMVDLLGRAGLL EA ++++MP+ PN +WG +L +C++HK
Sbjct: 457 FEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHK 516
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
N+++ E A ++ L + G +L+SNIYAA+ RW D A +R + K G+KK G S I
Sbjct: 517 NSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSI 576
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
EV +H F G++ ++ + E+L E++ +++ G +PD ++L
Sbjct: 577 EVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVL 622
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 193/425 (45%), Gaps = 80/425 (18%)
Query: 12 FSP--SNPSRPFSIITYNNSL---LDCF--DHLLQQCKTI---HQLKQVHNQLIVTGANA 61
FSP S+P + TY L +D F +L+ C I K++H + G +
Sbjct: 83 FSPFESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVS 142
Query: 62 SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS------------ 109
F+ ++ +Y+ G L AR +F+ + + W++++R ++
Sbjct: 143 DVFVVNALMQMYSECGSLVSARLLFDKM---SERDVVSWSTMIRAYITLFYGFSQRSIVS 199
Query: 110 -----------NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIV 158
N L E +L+V+M + V + T +I +C F+G+ + G+ +
Sbjct: 200 WTAMIAGYIRCNDL-EEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQL----GKRL 254
Query: 159 HNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
H ++L+ GF ++ + L+ MY K G++ + +FD ++ K+ ++W M S +A
Sbjct: 255 HAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCI 314
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
D A +LF +M G+ PN +T SLL
Sbjct: 315 DYAFQLFVQMRDNGVRPNELTMVSLL---------------------------------- 340
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
S+CA A MGK H ++ K G E V +K ALI +Y K GD+ AQ LFSE +++I
Sbjct: 341 -SLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDI 399
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
+WN ++ Y G ++A+++F+++E L +PN I++ + A + G E
Sbjct: 400 CTWNVMMAGYGMHGYGEKALKLFTEMETLG----VKPNDITFIGALHACSHAGLVVEGKG 455
Query: 399 LFRKM 403
LF KM
Sbjct: 456 LFEKM 460
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 213/742 (28%), Positives = 378/742 (50%), Gaps = 119/742 (16%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F+ L C ++ K++H L+V G + + L+ +++++Y G + +R+ F+ +
Sbjct: 25 FNALFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFD---YIH 81
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG----DGFTFPLVIRACKFMGSFR 149
K + WNSI+ V G Y A+ ++ + G D +TFP +++AC +
Sbjct: 82 KKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD-- 139
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+ VH V +MGF+ +V + L+ +Y++ G + + K+F + VK+ SWN M
Sbjct: 140 -----GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMI 194
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS----------------------- 246
SGF N + GAL + RM+ EG++ + +T S+L
Sbjct: 195 SGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLD 254
Query: 247 ------------HARCGRLEETMDLFDMMRKR---------------------------- 266
+++ GRL++ +FD M R
Sbjct: 255 SDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGM 314
Query: 267 ---GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY-VFVKNALICVYGKHGD 322
GI + + S+ + L+ + + I GFVI+ + D V + NAL+ +Y K G
Sbjct: 315 QLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGY 374
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
+ A +F ++ K+ +SWN L+T Y + GL EA++ ++ +E+ PN +W +
Sbjct: 375 MNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRD---TIPNQGTWVS 431
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS 442
+I A++ G AL G +IH +++ S
Sbjct: 432 IIPAYSHVG-----------------------------------ALQQGMKIHAKLIKNS 456
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFE 502
+ ++ V L+++Y KCG LE+ +F +I + + WN++I+ G++G GE AL F+
Sbjct: 457 LYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFK 516
Query: 503 EMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRA 562
+M+ K D + FV++LSACSH+GLV+EG++ FD+M +E+ I+P ++HY CMVDLLGRA
Sbjct: 517 DMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRA 576
Query: 563 GLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLS 622
G L++A ++V+NMP++P+A +WG LL++C+++ N ++ + ++ + +E G Y+LLS
Sbjct: 577 GYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLS 636
Query: 623 NIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLE 682
NIYA + +WE KVR A+ +GL+K G S + V K +F +GN + + L+
Sbjct: 637 NIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELK 696
Query: 683 ELALQMENKGCVPDNDIILWEM 704
L+ +M++ G VPD + ++
Sbjct: 697 VLSAKMKSLGYVPDYSFVYQDI 718
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 29 SLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
S++ + H+ + Q ++H +LI F+A ++ +Y + GRL DA ++F
Sbjct: 431 SIIPAYSHV----GALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYE 486
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
P D +S+ WN+I+ +G E AL+L+ M V D TF ++ AC G
Sbjct: 487 IPRD---TSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSG 541
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 205/647 (31%), Positives = 339/647 (52%), Gaps = 48/647 (7%)
Query: 59 ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
N + L R++ + G AR +F+ P + ++++ ++GL A+K
Sbjct: 8 TNIPSHLGLRLIRVALNVGDFNRARQLFDNIP---QPDPTTCSTLISALTTHGLSNEAIK 64
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMG-SFRFRFSFGQIVHNHVLQMGFQGNVHIVNEL 177
+Y +++ G+ D F +AC G + R + VH+ + G +V + N L
Sbjct: 65 IYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKE-----VHDDATRCGVMSDVFVGNAL 119
Query: 178 IGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNF 237
I Y K + + ++FD + V++ +SW
Sbjct: 120 IHAYGKCKCVEGARRVFDDLVVRDVVSW-------------------------------- 147
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
TSL S + +CG + MD+F M G++ ++ +L CA+L GK IHGF
Sbjct: 148 ---TSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGF 204
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
++ G +FV +AL+ +Y K V+ A+ +F + +++VSWN ++T+Y + ++
Sbjct: 205 AVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKG 264
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
+F ++ + DG R + +W+AVIG NGR EEA+++FRKMQ N +TIS
Sbjct: 265 FSLFLKMSR-DG---VRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISS 320
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
+L C+ S L +G+EIH +V R ++ LL MY KCG L VF+ + +KD
Sbjct: 321 ILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKD 380
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
++ WN+MI M+G G+ AL F++M+ + +P+ V F VLS CSH+ LV EG +IF+
Sbjct: 381 VVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFN 440
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNT 597
M R+ +EP HY+C+VD+ RAG L EA ++ MPMEP A WG LL +CR++KN
Sbjct: 441 SMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNV 500
Query: 598 DVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
++A+ A ++F + G+Y+ L NI + W +A++VRI K +G+ K G SW++V
Sbjct: 501 ELAKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQV 560
Query: 658 KRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
K+H F G+ + + L+EL +M+ G PD D +L ++
Sbjct: 561 GNKVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDI 607
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 194/428 (45%), Gaps = 57/428 (13%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
++K+VH+ G + F+ ++ Y + + AR VF+ + W S+
Sbjct: 96 RVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVV---RDVVSWTSLSS 152
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
V G + ++ +M GV + T ++ AC + + G+ +H ++
Sbjct: 153 CYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLK----SGKEIHGFAVRH 208
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
G N+ + + L+ +YAK + ++ +FD + ++ +SWN + + + N + + LF
Sbjct: 209 GMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLF 268
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
+M +G+ + TW +++ GR EE +++F M+K G + I+ +L C+
Sbjct: 269 LKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFS 328
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
MGK IH +V + + AL+ +Y K GD+ +++N+F + K++V+WN +I
Sbjct: 329 ENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMI 388
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+ A G G+EAL LF KM L
Sbjct: 389 IANAMHG---------------------------------------NGKEALFLFDKMLL 409
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ------NGLLNMYMK 459
++V NSVT +G+LS C+ S + G +I SM ++ LV+ + ++++Y +
Sbjct: 410 SRVQPNSVTFTGVLSGCSHSRLVEEGVQIFN-----SMGRDHLVEPDANHYSCVVDIYSR 464
Query: 460 CGCLEEGH 467
G L E +
Sbjct: 465 AGRLNEAY 472
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 161/364 (44%), Gaps = 48/364 (13%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C + LK ++H + G + F+ + ++S+YA+ + +AR VF+ P
Sbjct: 185 ILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMP--- 241
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC----------- 142
+ WN +L N YE L++KM + GV D T+ VI C
Sbjct: 242 HRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVE 301
Query: 143 -----KFMG---------------SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
+ MG SF G+ +H +V + G++ L+ MYA
Sbjct: 302 MFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYA 361
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K G ++ S +FD +R K+ ++WN M A++ + AL LF +M L ++PN VT+T
Sbjct: 362 KCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTG 421
Query: 243 LLSSHARCGRLEETMDLFDMM-RKRGIEVGAEAIAVVLSVCADLAA-DHMGKVIHGFVIK 300
+LS + +EE + +F+ M R +E A + V+ + + + K I G +
Sbjct: 422 VLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPM- 480
Query: 301 GGFEDYVFVKNALICVYGKHGDVKV----AQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
E AL+ + +V++ A+ LF EIE N ++ +L A + E
Sbjct: 481 ---EPTASAWGALLAACRVYKNVELAKISAKKLF-EIEPNNPGNYVSLFNILVTAKMWSE 536
Query: 357 AVEV 360
A +V
Sbjct: 537 ASQV 540
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 215/678 (31%), Positives = 349/678 (51%), Gaps = 87/678 (12%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
LL+ ++ + H ++ + FL ++S YAR GRL +AR VF+ P +
Sbjct: 26 LLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPL---RN 82
Query: 97 SLLWNSIL-------RVNVSNGLYE----------NALKLYVKMRKLGVLGDGFTFPLVI 139
+ +N++L R + + L+E NA+ + G GD F +
Sbjct: 83 TFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAM 142
Query: 140 RACKF-MGSFRFRFSF-----------GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
A F + ++ F + G+ VH V + +VHI L+ MYAK +
Sbjct: 143 HADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERP 202
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
D+ ++FD + E N V+W SL++ +
Sbjct: 203 VDARRVFDAMP-----------------------------------ERNVVSWNSLITCY 227
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG-FEDY 306
+ G + E + LF M G ++ V+S CA LAA+ G+ +H ++K D
Sbjct: 228 EQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDD 287
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
+ + NAL+ +Y K G A+ +F + +++VS +++ YA++ ++A VFSQ
Sbjct: 288 MVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQ--- 344
Query: 367 LDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
M NVI+W+ +I A+A NG EEA+ LF +++ + T +L+ C A
Sbjct: 345 -----MVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIA 399
Query: 427 ALNIGREIHGHVVR------VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
L +G++ H HV++ ++ V N L++MY+K G +++G VFE++ +D ++
Sbjct: 400 VLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVS 459
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WN+MI GY NG ++AL FE M+ + PD V + VLSAC H+GLV+EGRR F M
Sbjct: 460 WNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMT 519
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
+ I P +HY CMVDLLGRAG L+EA +++K+MP EP++ +W +LL +CR+HKN ++
Sbjct: 520 EDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELG 579
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
E A ++F L E +G Y+LLSN+YA G+W D +VR S K +G+ K G SWIE+ K
Sbjct: 580 ERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGCSWIEIGSK 639
Query: 661 IHMFSSGNSLQSDLKNVC 678
+++F L D ++ C
Sbjct: 640 MNVF-----LARDNRHPC 652
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 21/243 (8%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
NN+L+D + +C + + + + + + S +L+ YA+ + DA+ VF
Sbjct: 291 NNALVDMY----AKCGRTWEARCIFDSM----PSRSVVSETSILAGYAKSANVEDAQVVF 342
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+ + + WN ++ NG E A++L+V++++ + +T+ V+ AC +
Sbjct: 343 SQM---VEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIA 399
Query: 147 SFRFRFSFGQIVHNHVLQMGF------QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
+ GQ H HVL+ GF + +V + N L+ MY K G + D K+F+++ +
Sbjct: 400 VLQL----GQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR 455
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
+ +SWN M G+A N AL LF+RM P+ VT +LS+ G ++E F
Sbjct: 456 DNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHF 515
Query: 261 DMM 263
M
Sbjct: 516 HFM 518
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 98/236 (41%), Gaps = 44/236 (18%)
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
++VA+ S L + + +L R HG V++ + + N L++ Y + G L E
Sbjct: 12 ELVAHLRASSPLADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREA 71
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
VF+ I ++ ++N+++S Y G + A A FE + + PD ++ AV++A +
Sbjct: 72 RRVFDGIPLRNTFSYNALLSAYARLGRPDEARALFEAIPD----PDQCSYNAVVAALARH 127
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
G + G + A M A D V NAY + +
Sbjct: 128 GRGHAG--------------DALRFLAAM-----------HADDFVL------NAYSFAS 156
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSY-----MLLSNIYAASGRWEDAAKV 637
L++C K+ E Q+ GL+ + + L ++YA R DA +V
Sbjct: 157 ALSACAAEKDLRTGE----QVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRV 208
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 222/716 (31%), Positives = 357/716 (49%), Gaps = 101/716 (14%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
+K+VH+ + G + ++ +YA+ G + DAR VF+ + W ++
Sbjct: 150 VKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGM---VERDIFSWTVMIGG 206
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
+G + A L+++M + G L + T+ ++ A + + + VH H + G
Sbjct: 207 LAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWV--KEVHKHAGKAG 264
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F ++ + N LI MYAK G + D+ +FD + ++ ISWN M G A N A +F
Sbjct: 265 FISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFL 324
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
+M+ EG P+ T+ SLL++H G E ++ K +EVG + +DL
Sbjct: 325 KMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEV----HKHAVEVG---------LVSDLR 371
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
V +A + +Y + G + AQ +F ++ +N+ +WNA+I
Sbjct: 372 ----------------------VGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIG 409
Query: 347 SYAE-------------------------------AGLCDEAVEVFSQLEK--LDGG--- 370
A+ A + +EA+E ++ +D G
Sbjct: 410 GVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVD 469
Query: 371 -------------------------SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
M NV +W+ +I A +G G EA LF +M
Sbjct: 470 LRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLR 529
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
+V ++ T +LS CA + AL +E+H H V + ++ V N L++MY KCG +++
Sbjct: 530 EGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDD 589
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
VF+ + ++D+ +W MI G +G G +AL F +M GFKP+G +FVAVLSACSH
Sbjct: 590 ARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSH 649
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
AGLV+EGRR F + +++ IEP MEHY CMVDLLGRAG L+EA + NMP+EP WG
Sbjct: 650 AGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWG 709
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
LL +C + N ++AE A + L ++ +Y+LLSNIYAA+G WE VR + +G
Sbjct: 710 ALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRG 769
Query: 646 LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
++K G+SWIEV +IH F G++ + K + L++L +++ +G VPD ++L
Sbjct: 770 IRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVL 825
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 125/485 (25%), Positives = 216/485 (44%), Gaps = 78/485 (16%)
Query: 111 GLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN 170
G E+A+K+Y +MR+ G + T+ +++AC S ++ G+ +H H++Q GFQ +
Sbjct: 9 GYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKW----GKKIHAHIIQSGFQSD 64
Query: 171 VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
V + L+ MY K G + D+ +FDK+ +N ISW +M G A A F +M+
Sbjct: 65 VRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQR 124
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
EG PN T+ S+L+++A G LE
Sbjct: 125 EGFIPNSYTYVSILNANASAGALEWV---------------------------------- 150
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
K +H + G + V NAL+ +Y K G + A+ +F + E++I SW +I A+
Sbjct: 151 -KEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQ 209
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
G EA +F Q+E+ GG + PN+ ++ +++ A
Sbjct: 210 HGRGQEAFSLFLQMER--GGCL--PNLTTYLSILNA------------------------ 241
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
S + AL +E+H H + ++ V N L++MY KCG +++ LVF
Sbjct: 242 ---------SAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVF 292
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
+ + +D+I+WN+MI G NG G A F +M + GF PD ++++L+ G
Sbjct: 293 DGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWE 352
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
+ + V E + + + V + R G + +A I + + N W ++
Sbjct: 353 WVKEVHKHAV-EVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMIGG 410
Query: 591 CRMHK 595
K
Sbjct: 411 VAQQK 415
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 147/631 (23%), Positives = 269/631 (42%), Gaps = 128/631 (20%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K++H +I +G + + ++++Y + G + DA+ +F+ + + + W ++
Sbjct: 50 KKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKM---VERNVISWTVMIGGL 106
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
G + A +++M++ G + + +T+ ++ A G+ + + VH+H + G
Sbjct: 107 AHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWV----KEVHSHAVNAGL 162
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
++ + N L+ MYAK G + D+ +FD + ++ SW +M G A + A LF +
Sbjct: 163 ALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQ 222
Query: 228 MELEGLEPNFVTWTSLLSSHA--RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
ME G PN T+ S+L++ A G LE
Sbjct: 223 MERGGCLPNLTTYLSILNASAITSTGALEWV----------------------------- 253
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
K +H K GF + V NALI +Y K G + A+ +F + +++++SWNA+I
Sbjct: 254 ------KEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMI 307
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
A+ G EA +F KMQ
Sbjct: 308 GGLAQNGCGHEA---------------------------------------FTIFLKMQQ 328
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
V +S T LL+ + A +E+H H V V + ++ V + ++MY++CG +++
Sbjct: 329 EGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDD 388
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA--- 522
L+F+++ +++ TWN+MI G G AL+ F +M GF PD FV +LSA
Sbjct: 389 AQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVG 448
Query: 523 -------------CSHAGLVN------------------EGRRIFDMMVREFRIEPQMEH 551
AGLV+ +++FD MV E +
Sbjct: 449 EEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMV-----ERNVTT 503
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
+ M+ L + G EA + M E P+A + ++L++C + + + S
Sbjct: 504 WTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAV 563
Query: 609 --GLITETTGSYMLLSNIYAASGRWEDAAKV 637
GL+++ L+ ++YA G +DA +V
Sbjct: 564 NAGLVSDLRVGNALV-HMYAKCGSVDDARRV 593
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 187/415 (45%), Gaps = 60/415 (14%)
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
++ +A G E+ M ++ MR+ G + +L C + GK IH +I+ G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
F+ V V+ AL+ +Y K G + D+A +F
Sbjct: 61 FQSDVRVETALVNMYVKCGSI-------------------------------DDAQLIFD 89
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
++ +ER NVISW+ +IG A GRG+EA F +MQ + NS T +L+
Sbjct: 90 KM-------VER-NVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNAN 141
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A + AL +E+H H V + ++ V N L++MY K G +++ +VF+ + ++D+ +W
Sbjct: 142 ASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWT 201
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL--SACSHAGLVNEGRRIFDM-- 538
MI G +G G+ A + F +M G P+ ++++L SA + G + + +
Sbjct: 202 VMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAG 261
Query: 539 ---MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM----PMEPNAYVWGTLLNSC 591
+ + R+ + H + + G + +A + M + NA + G N C
Sbjct: 262 KAGFISDLRVGNALIH------MYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGC 315
Query: 592 RMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
H+ + M + G + ++T +Y+ L N + ++G WE +V A GL
Sbjct: 316 G-HEAFTIFLKMQQE--GFVPDST-TYLSLLNTHVSTGAWEWVKEVHKHAVEVGL 366
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 118/233 (50%), Gaps = 9/233 (3%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
+ + +K+VH+ I G + ++ +YA+ G A+ VF+ + + W
Sbjct: 450 EALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDM---VERNVTTWT 505
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
++ +G A L+++M + G++ D T+ ++ AC G+ + + VH+H
Sbjct: 506 VMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWV----KEVHSH 561
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
+ G ++ + N L+ MYAK G + D+ ++FD + ++ SW +M G A + A
Sbjct: 562 AVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDA 621
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAE 273
L+LF +M+LEG +PN ++ ++LS+ + G ++E F + + GIE E
Sbjct: 622 LDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTME 674
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 104/243 (42%), Gaps = 42/243 (17%)
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE- 542
MI GY G E+A+ + +M G +P+ + ++++L AC + G++I +++
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA-- 600
F+ + ++E +V++ + G + +A I M +E N W ++ + A
Sbjct: 61 FQSDVRVE--TALVNMYVKCGSIDDAQLIFDKM-VERNVISWTVMIGGLAHYGRGQEAFH 117
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
+ Q G I + +Y+ + N A++G E +V A GL ++++
Sbjct: 118 RFLQMQREGFIPNSY-TYVSILNANASAGALEWVKEVHSHAVNAGLA-------LDLRVG 169
Query: 661 ---IHMFSSGNSLQSDLKNVCEVLEE------------------------LALQMENKGC 693
+HM++ S+ D + V + + E L LQME GC
Sbjct: 170 NALVHMYAKSGSI-DDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGC 228
Query: 694 VPD 696
+P+
Sbjct: 229 LPN 231
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 234/772 (30%), Positives = 393/772 (50%), Gaps = 128/772 (16%)
Query: 10 HQFSP----SNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFL 65
H FS + + P + TY+ L C + + K VH +L+ +G + +
Sbjct: 27 HAFSTLDLMTQQNAPPDLTTYSILLKSCI-----RFRNFQLGKLVHRKLMQSGLELDSVV 81
Query: 66 AARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
++S+Y++ G AR +FE K + W++++ +N + A+ ++ M +
Sbjct: 82 LNTLISLYSKCGDTETARLIFEG--MGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLE 139
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSF-GQIVHNHVLQMGF-QGNVHIVNELIGMYAK 183
LG + + F VIRAC +++ G+I++ V++ G+ + +V + ELI M+ K
Sbjct: 140 LGFYPNEYCFAAVIRACS-----NANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK 194
Query: 184 -MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
G + ++K+FDK+ +N ++W +M + FA A++LF MEL G P+ T++S
Sbjct: 195 GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSS 254
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
VLS C +L +GK +H VI+ G
Sbjct: 255 -----------------------------------VLSACTELGLLALGKQLHSRVIRLG 279
Query: 303 FEDYVFVKNALICVYGK---HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD-EAV 358
V V +L+ +Y K G V ++ +F ++ E N++SW A+IT+Y ++G CD EA+
Sbjct: 280 LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAI 339
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGA-------------------------------- 386
E+F K+ G + RPN S+S+V+ A
Sbjct: 340 ELFC---KMISGHI-RPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSL 395
Query: 387 ---FASNGRGEEALDLFR---------------------KMQLAKVVANSVTISG----- 417
+A +GR E+A F K + A ++ N + +G
Sbjct: 396 ISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISA 455
Query: 418 -----LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
LLS A A+ G +IHG +++ N + N L++MY +CG +E VF +
Sbjct: 456 FTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNE 515
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+E +++I+W SMI+G+ +G AL F +M+E G KP+ + +VAVLSACSH G+++EG
Sbjct: 516 MEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG 575
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
++ F+ M +E I P+MEHYACMVDLLGR+GLL EA + + +MP+ +A VW TLL +CR
Sbjct: 576 QKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACR 635
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
+H NT++ A I + +Y+LLSN++A++G+W+D K+R S K + L K AG
Sbjct: 636 VHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGC 695
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
SWIEV+ ++H F G + + + L++LA +++ G +PD D +L ++
Sbjct: 696 SWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDI 747
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 168/362 (46%), Gaps = 47/362 (12%)
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
PNF + L GRL D+M ++ +++L C +GK++
Sbjct: 7 PNFEPLKNRLIRQLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLV 66
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI-EEKNIVSWNALITSYAEAGL 353
H +++ G E V N LI +Y K GD + A+ +F + ++++VSW+A+++ +A +
Sbjct: 67 HRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSM 126
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
+A+ F L+ L+ G PN ++AVI A
Sbjct: 127 EWQAIWTF--LDMLELGFY--PNEYCFAAVIRA--------------------------- 155
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVS-MNKNILVQNGLLNMYMK-CGCLEEGHLVFE 471
C+ + +G I+G VV+ + ++ V L++M++K G L + VF+
Sbjct: 156 --------CSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFD 207
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
++ +++L+TW MI+ + G +A+ F +M +G+ PD + +VLSAC+ GL+
Sbjct: 208 KMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLAL 267
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRA---GLLQEASDIVKNMPMEPNAYVWGTLL 588
G+++ ++R + + +VD+ + G + ++ + + MP E N W ++
Sbjct: 268 GKQLHSRVIR-LGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAII 325
Query: 589 NS 590
+
Sbjct: 326 TA 327
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 207/634 (32%), Positives = 346/634 (54%), Gaps = 54/634 (8%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
F L A ++FET + + L+WN++ R + N ALKLYV M LG+L + +
Sbjct: 10 PHFDGLSYAISIFETIQ---EPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSY 66
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
+FP ++++C + GQ +H HVL++G+ ++++ LI MYA+ G++ D+ K+
Sbjct: 67 SFPFLLKSCAKSKAL----IEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKV 122
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FD+ ++ +S+ + +G+A + A +LF + ++ + V+W +++S +
Sbjct: 123 FDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVK----DVVSWNAMISGYVETCNF 178
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
+E ++L+ M K ++ + V+S CA + +G+ +H ++ ED+ F N
Sbjct: 179 KEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWI-----EDHGFGSNIK 233
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
I N LI Y++ G + A +F L K D
Sbjct: 234 IV--------------------------NVLIDLYSKCGEVETACGLFQGLAKKD----- 262
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
VISW+ +IG +EAL LF++M + N VT+ +L CA A++IGR
Sbjct: 263 ---VISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRW 319
Query: 434 IHGHV---VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
IH ++ ++ N + L+ + L++MY KCG +E VF+ + + L +WN+MI G+ M
Sbjct: 320 IHVYINKRLKGVTNASSLLTS-LIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAM 378
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
+G A F +M + G PD + FV +LSACSH+G+++ GR IF M ++++I P++E
Sbjct: 379 HGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLE 438
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL 610
HY CM+DLLG GL +EA ++++ MPMEP+ +W +LL +C+MH N ++ E+ A + +
Sbjct: 439 HYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKI 498
Query: 611 ITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSL 670
E GSY+LLSNIYA +GRW+ AK+R KG+KK G S IE+ +H F G+
Sbjct: 499 EPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKF 558
Query: 671 QSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ + +LEE+ + ME G VPD +L EM
Sbjct: 559 HPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEM 592
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 187/503 (37%), Positives = 290/503 (57%), Gaps = 17/503 (3%)
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
D ++ LF R + P+ WT+++ HA G E+ ++ + M +G+E A + +
Sbjct: 79 DYSVALFGRTQ----NPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSI 134
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
L +C GK +H +K GF+ ++V+ L+ VY + GDV AQ LF + EK++
Sbjct: 135 LKLCPI----EPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSL 190
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
VS A++T YA+ G D A +F +E+ DG + W+ +I + NG EAL
Sbjct: 191 VSLTAMLTCYAKHGELDAARVLFDGMEERDG--------VCWNVMIDGYTQNGMPNEALV 242
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
LFR+M AK N VT+ +LS C + AL GR +H ++ + N+ V L++MY
Sbjct: 243 LFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYS 302
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
KCG LE+ LVF++I+ KD++ WNSMI GY M+G + AL F+ M G P + F+
Sbjct: 303 KCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIG 362
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
+LSAC H+G V EG IF+ M E+ IEP++EHY CMV+LLGRAG +++A ++VKNM +E
Sbjct: 363 ILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIE 422
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
P+ +WGTLL +CR+H + E + + +G+Y+LLSNIYAA G W+ A++R
Sbjct: 423 PDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLR 482
Query: 639 ISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
K G+KK G S IEV K+H F +G K + +LEE+ +++ G P D
Sbjct: 483 TMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTD 542
Query: 699 IILWEMMGKKNVKRIQRIRADNI 721
I+L + +G+ +R + ++ +
Sbjct: 543 IVLHD-IGETEKERSLEVHSEKL 564
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 181/368 (49%), Gaps = 19/368 (5%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
L+ + KTI L Q+H L G + L ++ YA GRL + +F S
Sbjct: 36 LIDKSKTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQ---NPS 92
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
W +I+ + GL+E AL Y +M GV + FTF +++ C G+
Sbjct: 93 VFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP--------IEPGK 144
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H+ +++GF ++++ L+ +YA+ G + + +LFD + K+ +S M + +A +
Sbjct: 145 ALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHG 204
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
+ D A LF ME E + V W ++ + + G E + LF M K + +
Sbjct: 205 ELDAARVLFDGME----ERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVL 260
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
VLS C L A G+ +H ++ G + V V AL+ +Y K G ++ A+ +F +I++K
Sbjct: 261 SVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDK 320
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
++V+WN++I YA G EA+++F + ++ P I++ ++ A +G E
Sbjct: 321 DVVAWNSMIVGYAMHGFSQEALQLFKSMCRMG----LHPTNITFIGILSACGHSGWVTEG 376
Query: 397 LDLFRKMQ 404
D+F KM+
Sbjct: 377 WDIFNKMK 384
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 129/269 (47%), Gaps = 34/269 (12%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP--- 90
F +L+ C I K +H+Q + G ++ ++ +L +YAR G + A+ +F+T P
Sbjct: 131 FSSILKLCP-IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKS 189
Query: 91 -----------------------FDC--KSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
FD + + WN ++ NG+ AL L+ +M K
Sbjct: 190 LVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLK 249
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
+ T V+ AC +G+ G+ VH+++ G Q NVH+ L+ MY+K G
Sbjct: 250 AKAKPNEVTVLSVLSACGQLGALES----GRWVHSYIENNGIQFNVHVGTALVDMYSKCG 305
Query: 186 QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
+ D+ +FDK+ K+ ++WN M G+A++ AL+LFK M GL P +T+ +LS
Sbjct: 306 SLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILS 365
Query: 246 SHARCGRLEETMDLFDMMRKR-GIEVGAE 273
+ G + E D+F+ M+ GIE E
Sbjct: 366 ACGHSGWVTEGWDIFNKMKDEYGIEPKIE 394
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 234/769 (30%), Positives = 391/769 (50%), Gaps = 128/769 (16%)
Query: 10 HQFSP----SNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFL 65
H FS + + P + TY+ L C + + K VH +L+ +G + +
Sbjct: 9 HAFSTLDLMTQQNAPPDLTTYSILLKSCI-----RFRNFQLGKLVHRKLMQSGLELDSVV 63
Query: 66 AARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
++S+Y++ G AR +FE K + W++++ +N + A+ ++ M +
Sbjct: 64 LNTLISLYSKCGDTETARLIFEG--MGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLE 121
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSF-GQIVHNHVLQMGF-QGNVHIVNELIGMYAK 183
LG + + F VIRAC +++ G+I++ V++ G+ + +V + ELI M+ K
Sbjct: 122 LGFYPNEYCFAAVIRACS-----NANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK 176
Query: 184 -MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
G + ++K+FDK+ +N ++W +M + FA A++LF MEL G P+ T++S
Sbjct: 177 GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSS 236
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
VLS C +L +GK +H VI+ G
Sbjct: 237 -----------------------------------VLSACTELGLLALGKQLHSRVIRLG 261
Query: 303 FEDYVFVKNALICVYGK---HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD-EAV 358
V V +L+ +Y K G V ++ +F ++ E N++SW A+IT+Y ++G CD EA+
Sbjct: 262 LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAI 321
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGA-------------------------------- 386
E+F K+ G + RPN S+S+V+ A
Sbjct: 322 ELFC---KMISGHI-RPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSL 377
Query: 387 ---FASNGRGEEALDLFR---------------------KMQLAKVVANSVTISG----- 417
+A +GR E+A F K + A ++ N + +G
Sbjct: 378 ISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISA 437
Query: 418 -----LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
LLS A A+ G +IHG +++ N + N L++MY +CG +E VF +
Sbjct: 438 FTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNE 497
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+E +++I+W SMI+G+ +G AL F +M+E G KP+ + +VAVLSACSH G+++EG
Sbjct: 498 MEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG 557
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
++ F+ M +E I P+MEHYACMVDLLGR+GLL EA + + +MP+ +A VW TLL +CR
Sbjct: 558 QKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACR 617
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
+H NT++ A I + +Y+LLSN++A++G+W+D K+R S K + L K AG
Sbjct: 618 VHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGC 677
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
SWIEV+ ++H F G + + + L++LA +++ G +PD D +L
Sbjct: 678 SWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVL 726
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 163/346 (47%), Gaps = 47/346 (13%)
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
GRL D+M ++ +++L C +GK++H +++ G E V
Sbjct: 5 GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64
Query: 311 NALICVYGKHGDVKVAQNLFSEI-EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
N LI +Y K GD + A+ +F + ++++VSW+A+++ +A + +A+ F L+ L+
Sbjct: 65 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTF--LDMLEL 122
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
G PN ++AVI A C+ +
Sbjct: 123 GFY--PNEYCFAAVIRA-----------------------------------CSNANYAW 145
Query: 430 IGREIHGHVVRVS-MNKNILVQNGLLNMYMK-CGCLEEGHLVFEQIEKKDLITWNSMISG 487
+G I+G VV+ + ++ V L++M++K G L + VF+++ +++L+TW MI+
Sbjct: 146 VGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITR 205
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
+ G +A+ F +M +G+ PD + +VLSAC+ GL+ G+++ ++R +
Sbjct: 206 FAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIR-LGLAL 264
Query: 548 QMEHYACMVDLLGRA---GLLQEASDIVKNMPMEPNAYVWGTLLNS 590
+ +VD+ + G + ++ + + MP E N W ++ +
Sbjct: 265 DVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITA 309
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 224/701 (31%), Positives = 351/701 (50%), Gaps = 123/701 (17%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAF---LAARVLSIYARFGRLFDARNVFE 87
+ LLQ+C K+I KQ+H I G +S + L + + + YA FG AR +F+
Sbjct: 21 YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFD 80
Query: 88 TAPFDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGV-LGDGFTFPLVIRACKFM 145
+ ++ SL WN+++R+ ++GL +AL L+V+M G D +T+P VI+AC
Sbjct: 81 ----ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKAC--- 133
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
G + G ++H + GF + + N L+ MY G+M + ++FD +R + +SW
Sbjct: 134 GDYLLP-EMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSW 192
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVT-------------------------- 239
N M +G+ N AL +F M +G+EP+ T
Sbjct: 193 NTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEV 252
Query: 240 ---------WTSLLSSHARCGRLEETMDLFDMMRKR----------GIEVGAEA------ 274
W SLL +A+CG ++E +F M KR G + +A
Sbjct: 253 KNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLL 312
Query: 275 ---------------IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
+A VLS CA L + G+ +HG+ I+ E V V+ ALI +Y K
Sbjct: 313 CQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAK 372
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
+V ++ VFS+ K
Sbjct: 373 CNNVNLS-------------------------------FRVFSKTSK--------QRTAP 393
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVV 439
W+A+I NG +A++LF++M + V N T++ LL A L R +HG+++
Sbjct: 394 WNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLI 453
Query: 440 RVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD--LITWNSMISGYGMNGLGENA 497
R I V L+++Y KCG LE H +F I KKD +ITW+++I+GYGM+G GE A
Sbjct: 454 RSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETA 513
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
++ F++M+++G KP+ + F ++L ACSHAGLV+EG +F M+ + ++ + +HY C++D
Sbjct: 514 ISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVID 573
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
LLGRAG L+EA ++++ M PN VWG LL SC +H+N ++ E A +F L TG+
Sbjct: 574 LLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGN 633
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
Y+LL+NIY+A GRW DA VR+ GL+K S IEV+
Sbjct: 634 YVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVR 674
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 212/624 (33%), Positives = 334/624 (53%), Gaps = 35/624 (5%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
YA+ G+ DA+ VFE P + +NS+L NG AL+ + M + V+
Sbjct: 152 YAKKGQFNDAKKVFEQMP---AKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWN 208
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
+++ +++ F +I + + V V L G+ AK G+M+++ +
Sbjct: 209 LMVAGYVKSGDLSSAWQL---FEKIPNPNA--------VSWVTMLCGL-AKYGKMAEARE 256
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
LFD++ KN +SWN M + + + D A++LFK+M + V+WT++++ + R G+
Sbjct: 257 LFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKMP----HKDSVSWTTIINGYIRVGK 312
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
L+E +++ M + I ++ ++ AD M I G D V N+
Sbjct: 313 LDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMFSRI-------GAHD-VVCWNS 364
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
+I Y + G + A NLF ++ KN VSWN +I+ YA+AG D A E+F +M
Sbjct: 365 MIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQ--------AM 416
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
N++SW+++I F N +AL M + T + LS CA AAL +G
Sbjct: 417 REKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGN 476
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
++H ++++ ++ V N L+ MY KCG ++ VF IE DLI+WNS+ISGY +NG
Sbjct: 477 QLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNG 536
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
A FE+M PD V F+ +LSACSHAGL N+G IF M+ +F IEP EHY
Sbjct: 537 YANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHY 596
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
+C+VDLLGR G L+EA + V+ M ++ NA +WG+LL +CR+HKN ++ A ++F L
Sbjct: 597 SCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERLFELEP 656
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
+Y+ LSN++A +GRWE+ +VR+ + K K G SWIEV+ +I F S + +
Sbjct: 657 HNASNYITLSNMHAEAGRWEEVERVRMLMRGKRAGKQPGCSWIEVQNQIQHFLSHDPAKL 716
Query: 673 DLKNVCEVLEELALQMENKGCVPD 696
KN+ +L LA M +K D
Sbjct: 717 RPKNIQIILNTLAAHMRDKCNTSD 740
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 183/376 (48%), Gaps = 42/376 (11%)
Query: 53 QLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGL 112
QL N +A +L A++G++ +AR +F+ P + + WN+++ V +
Sbjct: 225 QLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMP---SKNVVSWNAMIATYVQDLQ 281
Query: 113 YENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRFSFGQ-----IVHNHVLQMG 166
+ A+KL+ KM D ++ +I +G R + Q I L G
Sbjct: 282 VDEAVKLFKKMPH----KDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSG 337
Query: 167 FQGNVHI-----------------VNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
N I N +I Y++ G+M ++ LF ++ +KN +SWN M
Sbjct: 338 LIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMI 397
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
SG+A D A E+F+ M E N V+W SL++ + + + MM K G +
Sbjct: 398 SGYAQAGQMDRATEIFQAMR----EKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKK 453
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
A LS CA+LAA +G +H +++K G+ + +FV NALI +Y K G V+ A+ +
Sbjct: 454 PDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQV 513
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER--PNVISWSAVIGAF 387
F +IE +++SWN+LI+ YA G ++A + F Q+ S ER P+ +++ ++ A
Sbjct: 514 FRDIECVDLISWNSLISGYALNGYANKAFKAFEQM------SSERVVPDEVTFIGMLSAC 567
Query: 388 ASNGRGEEALDLFRKM 403
+ G + LD+F+ M
Sbjct: 568 SHAGLANQGLDIFKCM 583
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 194/404 (48%), Gaps = 68/404 (16%)
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
N+ N +I + AK ++ D+ +LFD++ ++N +SWN M +G+ N + A ELF M
Sbjct: 47 NLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMP 106
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
E + +W +++ + R G+LE+ +L +++ + + + C +
Sbjct: 107 ----ERDNFSWALMITCYTRKGKLEKARELLELVPDK-----------LDTACWN----- 146
Query: 290 MGKVIHGFVIKGGFED--YVFVK---------NALICVYGKHGDVKVAQNLFSEIEEKNI 338
+I G+ KG F D VF + N+++ Y ++G + +A F + E+N+
Sbjct: 147 --AMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNV 204
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS-----------------------MERP 375
VSWN ++ Y ++G A ++F ++ + S M
Sbjct: 205 VSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSK 264
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH 435
NV+SW+A+I + + + +EA+ LF+KM V+ + I+G + V L+ R+++
Sbjct: 265 NVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRV----GKLDEARQVY 320
Query: 436 GHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
+ K+I Q L++ ++ G ++E +F +I D++ WNSMI+GY +G +
Sbjct: 321 NQMP----CKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMD 376
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
AL F +M + V++ ++S + AG ++ IF M
Sbjct: 377 EALNLFRQMP----IKNSVSWNTMISGYAQAGQMDRATEIFQAM 416
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 137/311 (44%), Gaps = 48/311 (15%)
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
+ F N I GK G V+ A +F + KN+V++N++I+ A+ +A ++F Q
Sbjct: 16 HAFNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQ-- 73
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
M N++SW+ +I + N EEA +LF M ++ + + +++
Sbjct: 74 ------MSLRNLVSWNTMIAGYLHNNMVEEASELFDVMP----ERDNFSWALMITCYTRK 123
Query: 426 AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMI 485
L RE+ + V + N ++ Y K G + VFEQ+ KDL+++NSM+
Sbjct: 124 GKLEKAREL---LELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSML 180
Query: 486 SGYGMNGLGENALATFEEMIE----------AGF-----------------KPDGVAFVA 518
+GY NG AL FE M E AG+ P+ V++V
Sbjct: 181 AGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVT 240
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
+L + G + E R +FD M + + + M+ + + EA + K MP
Sbjct: 241 MLCGLAKYGKMAEARELFDRMPSKNVVS-----WNAMIATYVQDLQVDEAVKLFKKMP-H 294
Query: 579 PNAYVWGTLLN 589
++ W T++N
Sbjct: 295 KDSVSWTTIIN 305
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 107/252 (42%), Gaps = 17/252 (6%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L C + L+ Q+H ++ +G F+ ++++YA+ GR+ A VF
Sbjct: 459 FACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFR--- 515
Query: 91 FDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
D + L+ WNS++ NG A K + +M V+ D TF ++ AC G
Sbjct: 516 -DIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLAN 574
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMM 208
I + + + L+ + ++G++ ++F ++VK N W +
Sbjct: 575 QGLD---IFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSL 631
Query: 209 FSGFALNFDCDGALELFKRMELEGLEP-NFVTWTSLLSSHARCGRLEETMDLFDMMR--K 265
++ + + L F L LEP N + +L + HA GR EE + +MR +
Sbjct: 632 LGACRVHKNLE--LGRFAAERLFELEPHNASNYITLSNMHAEAGRWEEVERVRMLMRGKR 689
Query: 266 RGIEVGAEAIAV 277
G + G I V
Sbjct: 690 AGKQPGCSWIEV 701
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 221/800 (27%), Positives = 377/800 (47%), Gaps = 139/800 (17%)
Query: 37 LLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LLQ C + + + K++H Q++ G FL+ ++++Y + + DA VF+ P
Sbjct: 33 LLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMP--- 89
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + WNS++ G + A +L+ +M+ G + + T+ ++ AC
Sbjct: 90 RRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL----E 145
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H+ +++ G+Q + + N L+ MY K G + + ++F + ++ +S+N M +A
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA------------------------- 248
L LF +M EG+ P+ VT+ +LL +
Sbjct: 206 QKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIR 265
Query: 249 ----------RCGRLEETMDLFDMMRKRGIEVGAEAIAVV-------------------- 278
RCG ++ F + R + V IA +
Sbjct: 266 VGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDG 325
Query: 279 -----------LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
L+ C+ A GK+IH + + G V + NALI +Y + GD+ A+
Sbjct: 326 VALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKAR 385
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL--EKLDGGSMERPNVISWSAVIG 385
LF + +++++SWNA+I YA EA+ ++ Q+ E + G + +++S A
Sbjct: 386 ELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSS 445
Query: 386 AFA---------------SNG-----------------------RGEEALD--------- 398
A+A SNG G +A D
Sbjct: 446 AYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIA 505
Query: 399 -------------LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
LF++MQ ++ +++T + +LS C AL +G++IHG + +
Sbjct: 506 GHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQL 565
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
++ + N L+NMY++CG L++ VF ++ +D+++W +MI G G A+ F +M
Sbjct: 566 DVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQ 625
Query: 506 EAGFK-PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
GF+ PDG F ++LSAC+HAGLV EG +IF M E+ + P +EHY C+V LLGRA
Sbjct: 626 NEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARR 685
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNI 624
QEA ++ MP P+A VW TLL +CR+H N +AE A+ L Y+LLSN+
Sbjct: 686 FQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNV 745
Query: 625 YAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
YAA+GRW+D AK+R + +G++K G+SWIEV IH F + + + + L+ L
Sbjct: 746 YAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRL 805
Query: 685 ALQMENKGCVPDNDIILWEM 704
+++ME G PD +L ++
Sbjct: 806 SVEMEEAGYFPDTQHVLHDL 825
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 130/293 (44%), Gaps = 41/293 (13%)
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFV 309
CG E D+ + + R E +L C K IH +++ G +F+
Sbjct: 7 CGPDRE--DVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFL 64
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
N LI +Y K V A +F E+ ++++SWN+LI+ YA+ G +A ++F +
Sbjct: 65 SNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEE------ 118
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
MQ A + N +T +L+ C A L
Sbjct: 119 ---------------------------------MQNAGFIPNKITYISILTACYSPAELE 145
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
G++IH +++ ++ VQN LL+MY KCG L VF I +D++++N+M+ Y
Sbjct: 146 NGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYA 205
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
+ L F +M G PD V ++ +L A + +++EG+RI + V E
Sbjct: 206 QKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE 258
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 96/180 (53%), Gaps = 3/180 (1%)
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
G + D+ Q + T LL C L + IH +V + +I + N
Sbjct: 8 GPDREDVSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNL 67
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L+NMY+KC + + H VF+++ ++D+I+WNS+IS Y G + A FEEM AGF P+
Sbjct: 68 LINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPN 127
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHYACMVDLLGRAGLLQEASDI 571
+ ++++L+AC + G++I +++ ++ +P++++ ++ + G+ G L A +
Sbjct: 128 KITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQN--SLLSMYGKCGDLPRARQV 185
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 200/659 (30%), Positives = 341/659 (51%), Gaps = 80/659 (12%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
QLKQ+H +L+V G S FL +++ + FG + AR VF+ P + WN+I+R
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP---RPQIFPWNAIIR 92
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
N +++AL +Y M+ V D FTFP +++AC + + G+ VH V ++
Sbjct: 93 GYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQM----GRFVHAQVFRL 148
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
GF +V + N LI +YAK ++ + +F G L
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSA---------------RTVFEGLPLP---------- 183
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
E V+WT+++S++A+ G E +++F MRK ++ A+ VL+ L
Sbjct: 184 --------ERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCL 235
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
G+ IH V+K G E + +L +Y K G V A+ LF +
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK------------- 282
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
M+ PN+I W+A+I +A NG EA+D+F +M
Sbjct: 283 --------------------------MKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
V ++++I+ +S CA+ +L R ++ +V R ++ + + L++M+ KCG +E
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
LVF++ +D++ W++MI GYG++G A++ + M G P+ V F+ +L AC+H
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
+G+V EG F++M + +I PQ +HYAC++DLLGRAG L +A +++K MP++P VWG
Sbjct: 437 SGMVREGWWFFNLMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWG 495
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
LL++C+ H++ ++ E A Q+F + TG Y+ LSN+YAA+ W+ A+VR+ K KG
Sbjct: 496 ALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKG 555
Query: 646 LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
L K G SW+EV+ ++ F G+ + + +E + +++ G V + D L ++
Sbjct: 556 LNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDL 614
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 156/338 (46%), Gaps = 23/338 (6%)
Query: 29 SLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
S+L+ F L + + Q + +H ++ G L + ++YA+ G++ A+ +F+
Sbjct: 227 SVLNAFTCL----QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK 282
Query: 89 APFDCKSSSL-LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
KS +L LWN+++ NG A+ ++ +M V D + I AC +GS
Sbjct: 283 M----KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
S ++ +V + ++ +V I + LI M+AK G + + +FD+ ++ + W+
Sbjct: 339 LEQARS----MYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSA 394
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
M G+ L+ A+ L++ ME G+ PN VT+ LL + G + E F++M
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMADHK 454
Query: 268 IEVGAEAIAVVLSVCADLAA-DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV- 325
I + A V+ + D +VI ++ G V V AL+ KH V++
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG----VTVWGALLSACKKHRHVELG 510
Query: 326 ---AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
AQ LFS I+ N + L YA A L D EV
Sbjct: 511 EYAAQQLFS-IDPSNTGHYVQLSNLYAAARLWDRVAEV 547
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 206/641 (32%), Positives = 333/641 (51%), Gaps = 47/641 (7%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
LA + + +Y+ G L AR++F+ P + W ++ +G A++ Y R
Sbjct: 13 LALKFIKVYSNSGDLQRARHLFDKIP---QPDLPTWTILISALTKHGRSLEAIQYYNDFR 69
Query: 125 -KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
K V D V +AC S R + + VH ++ GF +V + N LI MY K
Sbjct: 70 HKNCVEPDKLLLLSVAKAC---ASLRDVMN-AKRVHEDAIRFGFCSDVLLGNALIDMYGK 125
Query: 184 MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
R +GA +F+ M + ++WTS+
Sbjct: 126 -------------CRCS------------------EGARLVFEGMPFR----DVISWTSM 150
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
S + CG L E + F M G + ++ +L C DL G+ +HGFV++ G
Sbjct: 151 ASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGM 210
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
VFV +AL+ +Y ++ AQ +F + ++ VSWN LIT+Y C++ + VF +
Sbjct: 211 GGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGR 270
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
+ G N SW+AVIG NGR E+AL++ +MQ + N +TI+ +L C
Sbjct: 271 MMSEGVGL----NYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACT 326
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
+L G++IHG++ R +++ L+ MY KCG LE VF + K+D ++WN+
Sbjct: 327 NLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNT 386
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
MI M+G GE AL F EM+++G +P+ V F VLS CSH+ LV+EG IFD M R+
Sbjct: 387 MIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDH 446
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+EP +H++CMVD+L RAG L+EA + +K MP+EP A WG LL CR++KN ++
Sbjct: 447 SVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIA 506
Query: 604 ASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHM 663
A+++F + ++ G+Y+LLSNI ++ W +A++ R + +G+ K G SWI+V+ ++H
Sbjct: 507 ANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQVRNRVHT 566
Query: 664 FSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
F G+ + L+ + +M G +P+ D +L ++
Sbjct: 567 FVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDV 607
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 184/362 (50%), Gaps = 11/362 (3%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
+ + K+VH I G + L ++ +Y + AR VFE PF + W
Sbjct: 92 RDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPF---RDVISWT 148
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
S+ V+ GL AL + KM G + T ++ AC + + G+ VH
Sbjct: 149 SMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKS----GREVHGF 204
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
V++ G GNV + + L+ MYA + + +FD + ++ +SWN++ + + LN +C+
Sbjct: 205 VVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKG 264
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
L +F RM EG+ N+ +W +++ + GR E+ +++ M+ G + I VL
Sbjct: 265 LSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPA 324
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
C +L + GK IHG++ + F + AL+ +Y K GD+++++ +FS + +++ VSW
Sbjct: 325 CTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSW 384
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
N +I + + G +EA+ +F ++ +D G RPN ++++ V+ + + +E L +F
Sbjct: 385 NTMIIATSMHGNGEEALLLFREM--VDSGV--RPNSVTFTGVLSGCSHSRLVDEGLLIFD 440
Query: 402 KM 403
M
Sbjct: 441 SM 442
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 360 bits (923), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 206/666 (30%), Positives = 354/666 (53%), Gaps = 81/666 (12%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
N + L CF + + Q+H + G +A ++S+YA+ L +A +F
Sbjct: 247 NFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLF 306
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
P D + WN ++ V NGL ++AL+L+ M+K G+ D T ++ A +
Sbjct: 307 GLMPRD---DLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELN 363
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
F+ G+ +H ++++ +V +V+ L+ +Y K + + +FD + + + +
Sbjct: 364 GFKQ----GKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGS 419
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
M SG+ LN + A+++F+ + G++PN V
Sbjct: 420 TMISGYVLNRMSEAAVKMFRYLLALGIKPNAVM--------------------------- 452
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
+A L CA +AA +G+ +HG+V+K +E +V++AL+ +Y K G + ++
Sbjct: 453 --------VASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLS 504
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+FS++ K DE ++W+++I +
Sbjct: 505 HYMFSKMSAK------------------DE---------------------VTWNSMISS 525
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
FA NG EEALDLFR+M + V N+VTIS +LS CA A+ G+EIHG +++ + +
Sbjct: 526 FAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRAD 585
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+ ++ L++MY KCG LE VFE + +K+ ++WNS+IS YG +GL + ++ M E
Sbjct: 586 LFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQE 645
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
GFK D V F+A++SAC+HAG V EG R+F M E+ IEPQ+EH +CMVDL RAG L
Sbjct: 646 EGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLD 705
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
+A + +MP +P+A +WG LL++CR+H+N ++AE + ++F L G Y+L+SNI A
Sbjct: 706 KAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINA 765
Query: 627 ASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELAL 686
+GRW+ +K+R K K ++K+ G SW++V H+F + + D + + L+ L +
Sbjct: 766 VAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHPDSEEIYMSLKSLII 825
Query: 687 QMENKG 692
+++ +G
Sbjct: 826 ELKQEG 831
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 139/577 (24%), Positives = 251/577 (43%), Gaps = 92/577 (15%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTG-----ANASAFLAARVLSIYARFGRLFDARNVFET 88
LL+ C L ++H + + +G A L R++ +Y R DA VF +
Sbjct: 42 LLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVAVFSS 101
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM--RKLGVLGDGFTFPLVIRACKFMG 146
P +++L WN ++R G + A+ YVKM DG T P V+++C +G
Sbjct: 102 LPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALG 161
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
+ G++VH +G ++++ + LI MYA G +
Sbjct: 162 ALHL----GRLVHRTTRALGLDRDMYVGSALIKMYADAGLL------------------- 198
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
DGA E+F M+ E + V W ++ + + G + + LF +MR
Sbjct: 199 ------------DGAREVFDGMD----ERDCVLWNVMMDGYVKAGDVASAVGLFRVMRAS 242
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
G + +A LSVCA A G +H +K G E V V N L+
Sbjct: 243 GCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLV------------ 290
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+ YA+ +EA +F G M R ++++W+ +I
Sbjct: 291 -------------------SMYAKCQCLEEAWRLF--------GLMPRDDLVTWNGMISG 323
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
NG ++AL LF MQ + + +SVT++ LL E G+EIHG++VR + +
Sbjct: 324 CVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVD 383
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+ + + L+++Y KC + VF+ + D++ ++MISGY +N + E A+ F ++
Sbjct: 384 VFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLA 443
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
G KP+ V + L AC+ + G+ + +++ E + + ++D+ + G L
Sbjct: 444 LGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKN-AYEGRCYVESALMDMYSKCGRLD 502
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+ + M + + W ++++S +N + EA+
Sbjct: 503 LSHYMFSKMSAK-DEVTWNSMISS--FAQNGEPEEAL 536
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 107/250 (42%), Gaps = 14/250 (5%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
+ YNN + I+ K++H +I A F + ++ +Y + G L A
Sbjct: 547 VKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELAL 606
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
VFE P + + + WNSI+ ++GL + ++ L M++ G D TF +I AC
Sbjct: 607 RVFEHMP---EKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACA 663
Query: 144 FMGSFR--FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
G + R H+ + V ++ ++ +Y++ G++ + + + K
Sbjct: 664 HAGQVQEGLRLFRCMTEEYHI-----EPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKP 718
Query: 202 YIS-WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDL 259
W + ++ + + L EL L+P+ + L+S+ +A GR + +
Sbjct: 719 DAGIWGALLHACRVHRNVE--LAEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKM 776
Query: 260 FDMMRKRGIE 269
+M+ + ++
Sbjct: 777 RRLMKDKKVQ 786
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 218/669 (32%), Positives = 346/669 (51%), Gaps = 88/669 (13%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH + G ++ AF+ ++ Y+ G AR VF+ + + W ++ V
Sbjct: 167 VHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEY---KDMVSWTGMVACYVE 223
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
N +E +LKL+ +MR +G + FTF V++AC + F + G+ VH + +
Sbjct: 224 NECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVF----NVGKAVHGCAFKTSYLE 279
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
+ + ELI +Y K G D D AL++F+ M
Sbjct: 280 ELFVGVELIDLYIKSG-------------------------------DVDDALQVFEEMP 308
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
+ + P W+ +++ +A+ + EE +++F MR+ + +A +L CA L
Sbjct: 309 KDDVIP----WSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQ 364
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+G IH V+K G + VFV NAL+ YA
Sbjct: 365 LGNQIHCHVVKVGLDMNVFVSNALM-------------------------------DMYA 393
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNV--ISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
+ G + ++++FS E PN +SW+ VI + G GE+AL LF+ M +
Sbjct: 394 KCGRMENSLQLFS----------ESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQ 443
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
V VT S +L CA AAL G +IH V+ +KN +V N L++MY KCG +++
Sbjct: 444 VQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDAR 503
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
LVF+ + + D ++WN+MISGY ++GL AL TFE M+E KPD V FV +LSACS+AG
Sbjct: 504 LVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAG 563
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
L++ G+ F MV E+ IEP EHY CMV LLGR+G L +A+ +V +P EP+ VW L
Sbjct: 564 LLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRAL 623
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
L++C +H + ++ A ++ + E +++LLSNIYA + RW + A +R S K KG++
Sbjct: 624 LSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIR 683
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGK 707
K G SWIE + ++H FS G++ D K + +LE L ++ N+G VPD +L ++
Sbjct: 684 KEPGLSWIENQGRVHYFSVGDTSHPDTKLINGMLEWLNMKARNEGYVPDFSSVLLDV--- 740
Query: 708 KNVKRIQRI 716
++V + QR+
Sbjct: 741 EDVDKEQRL 749
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/506 (23%), Positives = 217/506 (42%), Gaps = 107/506 (21%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ +H +++ G ++ N L+ Y K + D+ KLFD++ +N +S
Sbjct: 63 GKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVS---------- 112
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
FVT L+ +++C R E + LF ++ G E+
Sbjct: 113 ----------------------FVT---LIQGYSQCLRFSEAIGLFSRLQGEGHELNPFV 147
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ VL + +G +H V K GF+ FV ALI Y G + A+ +F IE
Sbjct: 148 FSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIE 207
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA-------- 386
K++VSW ++ Y E +E++++FS++ + +PN ++++V+ A
Sbjct: 208 YKDMVSWTGMVACYVENECFEESLKLFSRMRIVGF----KPNNFTFASVLKACVGLEVFN 263
Query: 387 ---------------------------FASNGRGEEALDLFRKMQLAKVV---------- 409
+ +G ++AL +F +M V+
Sbjct: 264 VGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYA 323
Query: 410 ---------------------ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
N T++ LL CA L +G +IH HVV+V ++ N+
Sbjct: 324 QSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVF 383
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
V N L++MY KCG +E +F + ++WN++I GY G GE AL F++M+E
Sbjct: 384 VSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQ 443
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+ V + +VL AC+ + G +I + V+ + + A ++D+ + G +++A
Sbjct: 444 VQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNA-LIDMYAKCGNIKDA 502
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMH 594
+V +M E + W +++ +H
Sbjct: 503 R-LVFDMLREHDQVSWNAMISGYSVH 527
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 170/359 (47%), Gaps = 52/359 (14%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K VH T F+ ++ +Y + G + DA VFE P K + W+ ++
Sbjct: 266 KAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMP---KDDVIPWSFMIARY 322
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+ E A++++ +MR+ VL + FT +++AC + + G +H HV+++G
Sbjct: 323 AQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQ----LGNQIHCHVVKVGL 378
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
NV + N L+ MYAK G+M +S +LF + +SWN + G+ + + AL LFK
Sbjct: 379 DMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKD 438
Query: 228 M---ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
M +++G E VT++S VL CA
Sbjct: 439 MLECQVQGTE---VTYSS-----------------------------------VLRACAG 460
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
+AA G IH +K ++ V NALI +Y K G++K A+ +F + E + VSWNA+
Sbjct: 461 IAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAM 520
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
I+ Y+ GL EA++ F + + + +P+ +++ ++ A ++ G + F+ M
Sbjct: 521 ISGYSVHGLYGEALKTFESMLETEC----KPDKVTFVGILSACSNAGLLDRGQAYFKSM 575
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 158/323 (48%), Gaps = 19/323 (5%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LLQ C ++ L+ Q+H ++ G + + F++ ++ +YA+ GR+ ++ +F +P +C
Sbjct: 353 LLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESP-NC 411
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
S WN+++ V G E AL L+ M + V G T+ V+RAC + +
Sbjct: 412 TDVS--WNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEP--- 466
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G +H+ ++ + N + N LI MYAK G + D+ +FD +R + +SWN M SG++
Sbjct: 467 -GSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYS 525
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGA 272
++ AL+ F+ M +P+ VT+ +LS+ + G L+ F M+ + IE A
Sbjct: 526 VHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCA 585
Query: 273 EAIAVVLSVCADLAA-DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV---KVAQN 328
E ++ + D K++H FE V V AL+ H DV +++
Sbjct: 586 EHYTCMVWLLGRSGHLDKAAKLVHEI----PFEPSVMVWRALLSACVIHNDVELGRISAQ 641
Query: 329 LFSEIEEKNIVSWNALITSYAEA 351
EIE ++ + L YA A
Sbjct: 642 RVLEIEPEDEATHVLLSNIYANA 664
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 200/659 (30%), Positives = 340/659 (51%), Gaps = 80/659 (12%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
QLKQ+H +L+V G S FL +++ + FG + AR VF+ P + WN+I+R
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP---RPQIFPWNAIIR 92
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
N +++AL +Y M+ V D FTFP +++AC + + G+ VH V ++
Sbjct: 93 GYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQM----GRFVHAQVFRL 148
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
GF +V + N LI +YAK ++ + +F G L
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSA---------------RTVFEGLPLP---------- 183
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
E V+WT+++S++A+ G E +++F MRK ++ A+ VL+ L
Sbjct: 184 --------ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 235
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
G+ IH V+K G E + +L +Y K G V A+ LF +
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK------------- 282
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
M+ PN+I W+A+I +A NG EA+D+F +M
Sbjct: 283 --------------------------MKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
V ++++I+ +S CA+ +L R ++ +V R ++ + + L++M+ KCG +E
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
LVF++ +D++ W++MI GYG++G A++ + M G P+ V F+ +L AC+H
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
+G+V EG F+ M + +I PQ +HYAC++DLLGRAG L +A +++K MP++P VWG
Sbjct: 437 SGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWG 495
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
LL++C+ H++ ++ E A Q+F + TG Y+ LSN+YAA+ W+ A+VR+ K KG
Sbjct: 496 ALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKG 555
Query: 646 LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
L K G SW+EV+ ++ F G+ + + +E + +++ G V + D L ++
Sbjct: 556 LNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDL 614
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 155/338 (45%), Gaps = 23/338 (6%)
Query: 29 SLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
S+L+ F L + + Q + +H ++ G L + ++YA+ G++ A+ +F+
Sbjct: 227 SVLNAFTCL----QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK 282
Query: 89 APFDCKSSSL-LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
KS +L LWN+++ NG A+ ++ +M V D + I AC +GS
Sbjct: 283 M----KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
S ++ +V + ++ +V I + LI M+AK G + + +FD+ ++ + W+
Sbjct: 339 LEQARS----MYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSA 394
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
M G+ L+ A+ L++ ME G+ PN VT+ LL + G + E F+ M
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHK 454
Query: 268 IEVGAEAIAVVLSVCADLAA-DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV- 325
I + A V+ + D +VI ++ G V V AL+ KH V++
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG----VTVWGALLSACKKHRHVELG 510
Query: 326 ---AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
AQ LFS I+ N + L YA A L D EV
Sbjct: 511 EYAAQQLFS-IDPSNTGHYVQLSNLYAAARLWDRVAEV 547
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 219/667 (32%), Positives = 338/667 (50%), Gaps = 84/667 (12%)
Query: 60 NASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL-WNSILRVNVSNGLYENALK 118
++SA + +S +AR G++ ARN+F+ D +S ++ WN+I+ N A K
Sbjct: 13 SSSAAITQCQISYFARLGQIDRARNIFD----DLQSKTVTSWNAIVAGYFHNKRPAEAQK 68
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
L+ KM + N N L+
Sbjct: 69 LFDKMP-------------------------------------------ERNTISWNGLV 85
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
Y K G +S++ K+FDK+ +N +SW M G+ D A LF RM E N V
Sbjct: 86 SGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMP----EKNVV 141
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
+WT +L GR++E LFDM+ + + I +C++ ++
Sbjct: 142 SWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIG---GLCSEGRLSEAREIFDEMP 198
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
+ V ++I Y + V VA+ LF + +KN V+W A++ Y +G +EA
Sbjct: 199 QRN-----VVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAA 253
Query: 359 EVFSQLE--------------KLDG---------GSMERPNVISWSAVIGAFASNGRGEE 395
E+F + L+G M+ + +WSA+I + G E
Sbjct: 254 ELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELE 313
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
AL LF MQ V N +I +LSVC A+L+ GR++H +VR + +I V + L+
Sbjct: 314 ALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLIT 373
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY+KCG L G VF++ KD++ WNS+I+GY +G GE AL F EM +G PD +
Sbjct: 374 MYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEIT 433
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
F+ VLSAC + G V EG IF+ M +++++ + EHYACMVDLLGRAG L EA ++++NM
Sbjct: 434 FIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENM 493
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
P+E +A VWG LL++CR HKN D+AE A ++ L + G Y+LLSN+YA+ RW+D A
Sbjct: 494 PVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVA 553
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSL-QSDLKNVCEVLEELALQMENKGCV 694
++R + + + + K G SWIEV K+HMF+ G S + + + + LE+L + G
Sbjct: 554 ELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGASLREAGYC 613
Query: 695 PDNDIIL 701
PD ++
Sbjct: 614 PDGSFVM 620
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C ++ L +QVH+QL+ + + ++++ ++++Y + G L + VF+ F
Sbjct: 336 ILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDR--FSS 393
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG------- 146
K ++WNSI+ +G E AL+++ +M G D TF V+ AC + G
Sbjct: 394 KDI-VMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLE 452
Query: 147 ---SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
S + ++ Q ++ + G +NE + + M +D+ I
Sbjct: 453 IFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADA------------I 500
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDM 262
W + S + + D A E+ + L+ LEP+ LLS+ +A R ++ +L
Sbjct: 501 VWGALLSACRTHKNLDLA-EIAAKKLLQ-LEPSSAGPYILLSNLYASQSRWKDVAELRKT 558
Query: 263 MRKRGI 268
MR R +
Sbjct: 559 MRARNV 564
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 198/676 (29%), Positives = 345/676 (51%), Gaps = 58/676 (8%)
Query: 34 FDHLLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + + +++H + G +A ++++Y++ G + A VF
Sbjct: 160 FLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMT 219
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + W +I++ N + A +LY +M + G+ + TF ++ +C +
Sbjct: 220 ---ERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEAL-- 274
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+ G+ +H+H+ + G + ++ + N LI MY K + ++ ++FD++ ++ IS
Sbjct: 275 --NRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVIS------ 326
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG-----RLEETMDLFDMMRK 265
W+++++ +A+ G ++E L + MR+
Sbjct: 327 -----------------------------WSAMIAGYAQSGYKDKESIDEVFQLLERMRR 357
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
G+ +L C A G+ IH + K GFE ++ A+ +Y K G +
Sbjct: 358 EGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYE 417
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A+ +FS++ KN+V+W + ++ Y + G A +VFS+ M NV+SW+ +I
Sbjct: 418 AEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSE--------MPTRNVVSWNLMIA 469
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
+A NG + +L M+ + VT+ +L C A L G+ +H V++ +
Sbjct: 470 GYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLES 529
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
+ +V L+ MY KCG + E VF+++ +D + WN+M++GYG +G G A+ F+ M+
Sbjct: 530 DTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRML 589
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
+ P+ + AV+SACS AGLV EGR IF MM +F++ P+ +HY CMVDLLGRAG L
Sbjct: 590 KERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRL 649
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
QEA + +++MP EP+ VW LL +C+ H N +AE A I L Y+ LSNIY
Sbjct: 650 QEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIY 709
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A +GRW+D+ KVR +GLKK G+S IE+ +IH F + + ++ + LE L
Sbjct: 710 AQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAELETLT 769
Query: 686 LQMENKGCVPDNDIIL 701
+M+ G PD +L
Sbjct: 770 KEMKEAGYTPDMRFVL 785
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 134/525 (25%), Positives = 233/525 (44%), Gaps = 90/525 (17%)
Query: 111 GLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN 170
G A++L +++ G+L + T+ VI C + RF G++VH + ++G + +
Sbjct: 35 GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHC----AKARRFEDGKMVHKQLDELGVEID 90
Query: 171 VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
+++ N LI Y+K D A ++F+RM L
Sbjct: 91 IYLGNSLINFYSKFE-------------------------------DVASAEQVFRRMTL 119
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
+ VTW+S+++++A + D F+ M IE +L C + +
Sbjct: 120 R----DVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEK 175
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
G+ IH V G E DV VA ALIT Y++
Sbjct: 176 GRKIHTIVKAMGMET----------------DVAVA---------------TALITMYSK 204
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
G A EVF + M NV+SW+A+I A A + + EA +L+ +M A +
Sbjct: 205 CGEISVACEVFHK--------MTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISP 256
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
N+VT LL+ C ALN GR IH H+ + +++V N L+ MY KC ++E +F
Sbjct: 257 NAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIF 316
Query: 471 EQIEKKDLITWNSMISGYGMNGLGEN-----ALATFEEMIEAGFKPDGVAFVAVLSACSH 525
+++ K+D+I+W++MI+GY +G + E M G P+ V F+++L AC+
Sbjct: 317 DRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTA 376
Query: 526 AGLVNEGRRIFDMMVR-EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
G + +GR+I + + F ++ ++ + ++ + G + EA + M N W
Sbjct: 377 HGALEQGRQIHAELSKVGFELDRSLQ--TAIFNMYAKCGSIYEAEQVFSKMA-NKNVVAW 433
Query: 585 GTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASG 629
+ L+ + AE + S+ + T S+ L+ YA +G
Sbjct: 434 TSFLSMYIKCGDLSSAEKVFSE---MPTRNVVSWNLMIAGYAQNG 475
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 132/263 (50%), Gaps = 14/263 (5%)
Query: 3 HSLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANAS 62
H L Q Q F + + SL ++ +C +I++ +QV +++ AN +
Sbjct: 377 HGALEQGRQIHAELSKVGFEL---DRSLQTAIFNMYAKCGSIYEAEQVFSKM----ANKN 429
Query: 63 AFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVK 122
LS+Y + G L A VF P + + WN ++ NG +L
Sbjct: 430 VVAWTSFLSMYIKCGDLSSAEKVFSEMP---TRNVVSWNLMIAGYAQNGDIVKVFELLSS 486
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M+ G D T ++ AC + G++VH +++G + + + LIGMY+
Sbjct: 487 MKAEGFQPDRVTVITILEACGALAGL----ERGKLVHAEAVKLGLESDTVVATSLIGMYS 542
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K GQ++++ +FDK+ ++ ++WN M +G+ + D A++LFKRM E + PN +T T+
Sbjct: 543 KCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTA 602
Query: 243 LLSSHARCGRLEETMDLFDMMRK 265
++S+ +R G ++E ++F MM++
Sbjct: 603 VISACSRAGLVQEGREIFRMMQE 625
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 116/240 (48%), Gaps = 3/240 (1%)
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
G ++ P +S V GR EA+ L ++ ++ NS T ++ CA++
Sbjct: 14 GKELDGPTSVSGGEV-WRLCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRF 72
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
G+ +H + + + +I + N L+N Y K + VF ++ +D++TW+SMI+ Y
Sbjct: 73 EDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAY 132
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
N A TFE M +A +P+ + F+++L AC++ ++ +GR+I +V+ +E
Sbjct: 133 AGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIH-TIVKAMGMETD 191
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
+ ++ + + G + A ++ M E N W ++ + H+ + A + Q+
Sbjct: 192 VAVATALITMYSKCGEISVACEVFHKMT-ERNVVSWTAIIQANAQHRKLNEAFELYEQML 250
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 198/652 (30%), Positives = 333/652 (51%), Gaps = 81/652 (12%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH+ I G F++ ++ +Y++ G DA VF + W++I+
Sbjct: 352 VHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIE---DPDVVSWSAIITCLDQ 408
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
G A +++ +MR GV+ + FT ++ A +G + G+ +H V + GF+
Sbjct: 409 KGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYY----GESIHACVCKYGFEY 464
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
+ + N L+ MY K+G + D ++F+ ++ ISWN + SGF N CD L +F +M
Sbjct: 465 DNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQML 524
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
EG PN T+ S+L S C+ L+
Sbjct: 525 AEGFNPNMYTFISILRS-----------------------------------CSSLSDVD 549
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+GK +H ++K + FV AL+ +Y A+N F E
Sbjct: 550 LGKQVHAQIVKNSLDGNDFVGTALVDMY--------AKNRFLE----------------- 584
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+A +F++L K D + +W+ ++ +A +G+GE+A+ F +MQ V
Sbjct: 585 ------DAETIFNRLIKRD--------LFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVK 630
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
N T++ LS C+ A L+ GR++H ++ + ++ V + L++MY KCGC+E+ +V
Sbjct: 631 PNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVV 690
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F+ + +D ++WN++I GY +G G AL FE M++ G PD V F+ VLSACSH GL+
Sbjct: 691 FDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLI 750
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
EG++ F+ + + + I P +EHYACMVD+LGRAG E ++ M + N +W T+L
Sbjct: 751 EEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLG 810
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
+C+MH N + E A ++F L E +Y+LLSN++AA G W+D VR T+G+KK
Sbjct: 811 ACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKE 870
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
G SW+EV ++H+F S + ++ + L++L ++ + G P+ D +L
Sbjct: 871 PGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVL 922
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 141/558 (25%), Positives = 257/558 (46%), Gaps = 86/558 (15%)
Query: 34 FDHLLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ +L+ C + +++ K +H Q+I +G N + L ++++YA+ G A VF P
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + W +++ V+ G A+ L+ +MR+ GV + FT+ ++AC S
Sbjct: 191 ---ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKAC----SMCL 243
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
FG+ VH +++G ++ + + L+ +YAK G+M + ++F + +N +SWN + +
Sbjct: 244 DLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLN 303
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
GFA D + L LF RM G E NF +T
Sbjct: 304 GFAQMGDAEKVLNLFCRM--TGSEINFSKFT----------------------------- 332
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
++ VL CA+ G+++H I+ G E F+ L+ +Y K G A +F
Sbjct: 333 ----LSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVF 388
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
IE+ ++VSW+A+IT + G EA EV
Sbjct: 389 VRIEDPDVVSWSAIITCLDQKGQSREAAEV------------------------------ 418
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
F++M+ + V+ N T++ L+S + L G IH V + + V
Sbjct: 419 ---------FKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVC 469
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
N L+ MYMK G +++G VFE +DLI+WN+++SG+ N + L F +M+ GF
Sbjct: 470 NALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFN 529
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
P+ F+++L +CS V+ G+++ +V+ ++ +VD+ + L++A
Sbjct: 530 PNMYTFISILRSCSSLSDVDLGKQVHAQIVKN-SLDGNDFVGTALVDMYAKNRFLEDAET 588
Query: 571 IVKNMPMEPNAYVWGTLL 588
I N ++ + + W ++
Sbjct: 589 IF-NRLIKRDLFAWTVIV 605
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 157/335 (46%), Gaps = 19/335 (5%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C ++ + KQVH Q++ + + F+ ++ +YA+ L DA +F
Sbjct: 535 FISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL- 593
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
K W I+ +G E A+K +++M++ GV + FT + C + +
Sbjct: 594 --IKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATL-- 649
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H+ ++ G G++ + + L+ MYAK G + D+ +FD + ++ +SWN +
Sbjct: 650 --DSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIIC 707
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK-RGIE 269
G++ + AL+ F+ M EG P+ VT+ +LS+ + G +EE F+ + K GI
Sbjct: 708 GYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGIT 767
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV----KV 325
E A ++ + H + F+ + V + ++ HG++ +
Sbjct: 768 PTIEHYACMVDILGRAGKFHE---VESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERA 824
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
A LF E+E + ++ L +A G+ D+ V
Sbjct: 825 AMKLF-ELEPEIDSNYILLSNMFAAKGMWDDVTNV 858
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
SG+L CA LN G+ IHG V++ +N + + N L+N+Y KCG VF +I +
Sbjct: 132 SGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 191
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
+D+++W ++I+G+ G G A+ F EM G + + + L ACS + G+++
Sbjct: 192 RDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQV 251
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
++ A +VDL + G + A + MP + NA W LLN
Sbjct: 252 HAEAIKVGDFSDLFVGSA-LVDLYAKCGEMVLAERVFLCMPKQ-NAVSWNALLN 303
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 198/665 (29%), Positives = 352/665 (52%), Gaps = 39/665 (5%)
Query: 30 LLDCFDHLLQQ-----CKTIHQL-------------KQVHNQLIVTGANASAFLAARVLS 71
+L+C+ H++ Q T H L +VH +++ G + L ++
Sbjct: 117 VLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMG 176
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+Y++ G+L + +FE + WN+++ V G+Y AL L+ +M GVL D
Sbjct: 177 LYSKCGKLKEVCQLFEKMT---HRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPD 233
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
T ++ C + G+ +H +++ ++N L+ MY+K G+M ++
Sbjct: 234 EITMVSLVSTCAKLKDLEM----GKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAH 289
Query: 192 KLFDKVRVK--NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
L + + + W + SG+ + D A +LF +M E + V+WT+++S + +
Sbjct: 290 GLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMN----ERSLVSWTTMMSGYVQ 345
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFV 309
G E+++LF MR + A+ VLS C L +G+ +H F++ G F+
Sbjct: 346 GGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFL 405
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
NAL+ +Y K G + A F ++ K+ SWN+++ + +G D+A + F+++ + D
Sbjct: 406 GNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKD- 464
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
++SW+ ++ A+ + E+ ++F KMQ + V + T+ LLS CA+ ALN
Sbjct: 465 -------IVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALN 517
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
G ++ ++ + + + ++ L++MY KCGC+E + +F QI +K++ W +M++ Y
Sbjct: 518 HGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYA 577
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
M G A+ + EM E G KPD V F+A+L+ACSH GLV+EG + F+ + + I P +
Sbjct: 578 MEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTI 637
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
HY CMVDLLGR G L+E ++ MP+EP+ +W +L+ +CR H N ++AE Q+
Sbjct: 638 HHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIE 697
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
+ G+++LLSNIYA +GRW+D +KVR G+ K G + IE +H F + N
Sbjct: 698 IDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASNL 757
Query: 670 LQSDL 674
+ +D+
Sbjct: 758 VSADI 762
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 154/624 (24%), Positives = 276/624 (44%), Gaps = 99/624 (15%)
Query: 6 LHQPHQFSPSNPS---RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANAS 62
+H+P +P RP II LL+ C I + +H LI
Sbjct: 18 IHKPPTLNPKTSHSVLRPHWIID-----------LLKSCSNIREFSPIHAHLITANLIHD 66
Query: 63 AFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVK 122
+ ++VL+ L A + + + S++WN++L + G + L+ Y
Sbjct: 67 PEITSQVLAFLLSVNNLDCAHQILS---YSHEPESIIWNTLLENKLKEGCPQEVLECYYH 123
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M GVL D TF +I AC F G VH +L+ GF N + N L+G+Y+
Sbjct: 124 MVTQGVLLDISTFHFLIHAC----CKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYS 179
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K G++ + +LF+K+ ++ ISWN M S + L AL+LF M + G+ P+ +T S
Sbjct: 180 KCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVS 239
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
L+S+ CA L MGK +H +++
Sbjct: 240 LVST-----------------------------------CAKLKDLEMGKRLHLYIVDNK 264
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK--NIVSWNALITSYAEAGLCDEAVEV 360
+ N L+ +Y K G + A L S +E ++V W L++ Y ++ D+A ++
Sbjct: 265 LWIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQL 324
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
F + M +++SW+ ++ + G E+L+LF++M+ V+ + V + +LS
Sbjct: 325 FDK--------MNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLS 376
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ-------- 472
C ++GR +H +V M + + N LL++Y KCG L+E FEQ
Sbjct: 377 ACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAAS 436
Query: 473 -----------------------IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
I +KD+++WN+M++ Y + L + F +M +
Sbjct: 437 WNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNV 496
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
KPD +++LS+C+ G +N G + ++ + + I ++D+ G+ G ++ A
Sbjct: 497 KPDKTTLISLLSSCAKVGALNHGIWV-NVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAY 555
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRM 593
+I + +E N +VW ++ + M
Sbjct: 556 EIFTQI-IEKNVFVWTAMMAAYAM 578
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 199/622 (31%), Positives = 331/622 (53%), Gaps = 50/622 (8%)
Query: 60 NASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKL 119
N S F ++ Y+++G + A +F P + ++ WN+++ + +G L
Sbjct: 177 NPSLFCWNSMIYGYSKYGSVKKALELFAKMP---ERDTVSWNTMISILSQHGFGAETLNT 233
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
+++M G + T+ V+ AC + + +G +H +++M +V+ LI
Sbjct: 234 FLEMWNQGFRPNSMTYASVLSACTSI----YDLEWGAHLHARIVRMEPCLDVYAGCGLID 289
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MYAK G++ + ++FD + E N V+
Sbjct: 290 MYAKCGRLESARQVFDGLT-----------------------------------EHNAVS 314
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
WTSL+ A+ G EE + LF+ MR+ + +A VL VC +G+ +H I
Sbjct: 315 WTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTI 374
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
G + V V NAL+ +Y K GDV A + F + ++I+SW A+IT++++AG ++A E
Sbjct: 375 TRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKARE 434
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
F + M NVISW++++ + G EE L ++ +M V + +T S +
Sbjct: 435 YFDK--------MPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSI 486
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
S CA+ A L +G +I ++ + N+ V N ++ MY +CG +EE +F I K+L+
Sbjct: 487 SACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLV 546
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN+M++GY NG G + FE+M+ G PD +++V+VLS CSH+G V+EG+ F M
Sbjct: 547 SWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSM 606
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
++ I P EH+ CMVDLLGRAG L++A +++ MP +PNA +WG LL +CR+H NT +
Sbjct: 607 TKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKL 666
Query: 600 AEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKR 659
AE + L E GSY LL+NIY+ SG+ + VR + KG++K G SWIEV
Sbjct: 667 AELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDN 726
Query: 660 KIHMFSSGNSLQSDLKNVCEVL 681
++H+F+ ++ +K+V +L
Sbjct: 727 RVHVFTVDDTNHPQIKDVHRML 748
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/505 (25%), Positives = 231/505 (45%), Gaps = 45/505 (8%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H ++ MG + ++ + N L+ MY+ G +SD++++F + N SWN M SGFA +
Sbjct: 26 LHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISGFADSGQ 85
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
A +LF++M E + V+W S++S + G LE T+ K +G +A+
Sbjct: 86 MREAEKLFEKMP----ERDSVSWNSMMSGYFHNGELEATI-------KASGSLGYLKLAL 134
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
L HGF K F V+ +++ +Y K G + AQ +F +
Sbjct: 135 QL---------------HGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPS 179
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
+ WN++I Y++ G +A+E+F+++ + D +SW+ +I + +G G E L
Sbjct: 180 LFCWNSMIYGYSKYGSVKKALELFAKMPERD--------TVSWNTMISILSQHGFGAETL 231
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
+ F +M NS+T + +LS C L G +H +VR+ ++ GL++MY
Sbjct: 232 NTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMY 291
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG LE VF+ + + + ++W S+I G G E AL F +M E D
Sbjct: 292 AKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLA 351
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
VL C ++ G ++ + ++ + +V + + G + +A+ + MP+
Sbjct: 352 TVLGVCLSQKDISIGEQLHAHTITR-GLDSSVPVANALVTMYAKCGDVWKANHAFELMPI 410
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE-TTGSYMLLSNIYAASGRWEDAAK 636
+ W ++ + + DV + A + F + E S+ + Y G WE+ K
Sbjct: 411 R-DIISWTAMITA--FSQAGDVEK--AREYFDKMPERNVISWNSMLATYMQRGYWEEGLK 465
Query: 637 VRISAKTKGLKKVAGQSWIEVKRKI 661
V I +G+K WI I
Sbjct: 466 VYIQMLREGVKT----DWITFSTSI 486
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 191/373 (51%), Gaps = 18/373 (4%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ +L C +I+ L+ +H +++ + ++ +YA+ GRL AR VF+
Sbjct: 249 YASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGL- 307
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ +++ W S++ G E AL L+ +MR++ V D FT V+ C
Sbjct: 308 --TEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDI-- 363
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
S G+ +H H + G +V + N L+ MYAK G + + F+ + +++ ISW M +
Sbjct: 364 --SIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMIT 421
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
F+ D + A E F +M E N ++W S+L+++ + G EE + ++ M + G++
Sbjct: 422 AFSQAGDVEKAREYFDKMP----ERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKT 477
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+ +S CADLA +G I K GF V V N+++ +Y + G ++ AQ +F
Sbjct: 478 DWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMF 537
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
S I KN+VSWNA++ YA+ G + +E+F ++ L+ G++ P+ IS+ +V+ + +
Sbjct: 538 SSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKM--LNIGNV--PDQISYVSVLSGCSHS 593
Query: 391 GRGEEALDLFRKM 403
G E F M
Sbjct: 594 GFVSEGQYYFLSM 606
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
CA ++ I R++H ++ + + +I +QN LLNMY CG + + + VF I ++ +W
Sbjct: 14 CASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSW 73
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
N+MISG+ +G A FE+M E D V++ +++S H G
Sbjct: 74 NTMISGFADSGQMREAEKLFEKMPER----DSVSWNSMMSGYFHNG 115
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 213/707 (30%), Positives = 363/707 (51%), Gaps = 58/707 (8%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIY-ARFG-RLFDARNVFETAPF 91
F +L CKT Q KQ+H+Q I G + ++ + +R G + A +F P
Sbjct: 37 FISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIP- 95
Query: 92 DCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR 151
+ ++WN++++ ++LY+ M K GV D TFP ++ K G
Sbjct: 96 --EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGG---A 150
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
+ G+ +H HV++ G N+++ N L+ MY+ G M + +FD+ ++ SWN+M SG
Sbjct: 151 LACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISG 210
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+ RM+ EE+++L M + +
Sbjct: 211 -------------YNRMK----------------------EYEESIELLVEMERNLVSPT 235
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
+ + +VLS C+ + + K +H +V + E + ++NAL+ Y G++ +A +F
Sbjct: 236 SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR 295
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
++ ++++SW +++ Y E G A F Q+ D ISW+ +I + G
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDR--------ISWTIMIDGYLRAG 347
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
E+L++FR+MQ A ++ + T+ +L+ CA +L IG I ++ + + +++V N
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN 407
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++MY KCGC E+ VF ++++D TW +M+ G NG G+ A+ F +M + +P
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D + ++ VLSAC+H+G+V++ R+ F M + RIEP + HY CMVD+LGRAGL++EA +I
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
++ MPM PN+ VWG LL + R+H + +AE A +I L + Y LL NIYA RW
Sbjct: 528 LRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRW 587
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
+D +VR +KK G S IEV H F +G+ + + LEELA +
Sbjct: 588 KDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFA 647
Query: 692 GCVPDNDIILWEMMGKKNVK---RIQRIRADNIKSKHRIVGFRNLKL 735
+PD +L+E G K ++ ++ +R + I+S I FR + L
Sbjct: 648 AYLPDTSELLFE-AGNKELEEHSQVTTLRTNPIES---INWFREVAL 690
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 208/665 (31%), Positives = 335/665 (50%), Gaps = 83/665 (12%)
Query: 42 KTIHQLKQVHNQLI-VTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLW 100
K+ Q +Q+H +I + + +L ++ + YA G + A +F+ +S LW
Sbjct: 73 KSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVL---KNSFLW 129
Query: 101 NSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
N ++R SNGL +L LY +M G D FT+P V++AC + G+ VH+
Sbjct: 130 NFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDL----LLVEIGRRVHS 185
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
V+ G + ++++ N L+ MYAK G M + +FD++
Sbjct: 186 EVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRM----------------------- 222
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
E + +W +++S +A+ +FD+M K G+ + +LS
Sbjct: 223 ------------AERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLS 270
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDY-VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
CADL A GKVIHG+ ++ +Y F N+LI +Y + A+ LF + K+ V
Sbjct: 271 ACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTV 330
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
S W+++I +A NG E+L L
Sbjct: 331 S---------------------------------------WNSMILGYARNGDAFESLRL 351
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
FR+M L + VT +L C + AAL G IH ++V+ + N +V L++MY K
Sbjct: 352 FRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSK 411
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
CG L VF+++ K L++W++M++GYG++G G A++ + M PD F ++
Sbjct: 412 CGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSI 471
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
LSACSHAGLV EG+ IF M +E+ ++P + HY+CMVDLLGRAG L EA I++ M ++P
Sbjct: 472 LSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKP 531
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRI 639
+ +W LL + R+HKN +AE A ++F + + SY+ LSNIYAA RW+D +VR
Sbjct: 532 TSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRA 591
Query: 640 SAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDI 699
+ KGLKK G S+IE+ +H F G+ +++ L EL Q++ G PD +
Sbjct: 592 MVRRKGLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSL 651
Query: 700 ILWEM 704
+ +++
Sbjct: 652 VFYDV 656
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 204/455 (44%), Gaps = 90/455 (19%)
Query: 25 TYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
TY L C D LL + ++VH++++V G + ++ +L++YA+FG + AR
Sbjct: 163 TYPFVLKACGDLLLVEIG-----RRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARM 217
Query: 85 VFE-TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
VF+ A D S WN+++ N A ++ M K G+ D T ++ AC
Sbjct: 218 VFDRMAERDLTS----WNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACA 273
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQG-NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ + + G+++H + ++ N N LI MY M D+ +LF++VR K+
Sbjct: 274 DLKAVKE----GKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDT 329
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
+SWN M G+A N D +L LF+RM L+G P+ VT+ +
Sbjct: 330 VSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIA-------------------- 369
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
VL C +AA G IH +++K GF+ V AL+ +Y K G
Sbjct: 370 ---------------VLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGS 414
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
+ ++ +F E+ +K++VSW+A++ Y GL
Sbjct: 415 LACSRRVFDEMPDKSLVSWSAMVAGY---GL----------------------------- 442
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS 442
+GRG EA+ + M+ V+ ++ + +LS C+ + + G+EI + +
Sbjct: 443 -------HGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEY 495
Query: 443 MNKNILVQ-NGLLNMYMKCGCLEEGHLVFEQIEKK 476
K L + ++++ + G L+E +++ +E K
Sbjct: 496 NVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIK 530
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 1/141 (0%)
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS-MNKNILVQNGLLNMYMK 459
R+ L + S+ LL + + G+++H H++ S + N + L Y
Sbjct: 48 REHPLQQYPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAG 107
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
CG + + ++F+ I K+ WN MI GY NGL +L + EM+ G + D + V
Sbjct: 108 CGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFV 167
Query: 520 LSACSHAGLVNEGRRIFDMMV 540
L AC LV GRR+ +V
Sbjct: 168 LKACGDLLLVEIGRRVHSEVV 188
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 203/634 (32%), Positives = 338/634 (53%), Gaps = 54/634 (8%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
F L A +VFET + + L+WN++ R + + +ALKLYV M LG+L + +
Sbjct: 8 PHFEGLPYAISVFETIQ---EPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSY 64
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
TFP ++++C + + + G +H HVL++G++ ++++ LI MY + ++ D+ K+
Sbjct: 65 TFPFLLKSCAKLKASKE----GLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKV 120
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FD+ ++ +S+ + +G+A + A +F + ++ + V+W +++S + G
Sbjct: 121 FDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVK----DVVSWNAMISGYVETGNY 176
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
+E ++LF M K + + V+S A + +G+ +H ++ GF
Sbjct: 177 KEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGS-------- 228
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
N+ NALI Y++ G + A +F L D
Sbjct: 229 -----------------------NLKIVNALIDFYSKCGEMETACGLFLGLSYKD----- 260
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
VISW+ +IG + +EAL LF++M + N VT+ +L CA A++IGR
Sbjct: 261 ---VISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRW 317
Query: 434 IHGHV---VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
IH ++ ++ N + L + L++MY KCG +E H VF + K L WN+MI G+ M
Sbjct: 318 IHVYIDKRLKGVTNASSL-RTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAM 376
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
+G A F M + KPD + FV +LSACSHAG+++ GR IF M ++I P++E
Sbjct: 377 HGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLE 436
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL 610
HY CM+DLLG +GL +EA +++ M MEP+ +W +LL +C+MH N ++ E A +F +
Sbjct: 437 HYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKI 496
Query: 611 ITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSL 670
GSY+LLSNIYA +GRW + A++R KG+KKV G S IE+ +H F G+
Sbjct: 497 EPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKF 556
Query: 671 QSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ + +LEE+ + ++ G VPD +L EM
Sbjct: 557 HPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEM 590
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 358 bits (920), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 210/656 (32%), Positives = 358/656 (54%), Gaps = 55/656 (8%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
+C T+ + ++L V + F +L Y + + A +F++ P + +
Sbjct: 185 RCGTV----DLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMP---ERDVVS 237
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN ++ +G AL + V M+ GV D T+ + AC + S R+ G+ +H
Sbjct: 238 WNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRW----GKQLH 293
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
V++ + ++ + L+ +YAK G ++ +F+ +
Sbjct: 294 AQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVFNSLH--------------------- 332
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
+ N V WT L++ + G E+++LF+ MR + + A+A ++
Sbjct: 333 --------------DRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLI 378
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
S C +G+ +H +K G V V N+LI +Y K +++ A+++F + EK+IV
Sbjct: 379 SGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIV 438
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
SW ++IT++++ G +A E F DG M NVI+W+A++GA+ +G E+ L +
Sbjct: 439 SWTSMITAHSQVGNIAKAREFF------DG--MSTKNVITWNAMLGAYIQHGAEEDGLRM 490
Query: 400 FRKMQLAK-VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
+ M K V + VT L CA+ A +G +I G V+V + + V N ++ MY
Sbjct: 491 YNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYS 550
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
KCG + E VF+ + KD+++WN+MI+GY +G+G+ A+ F+++++ G KPD +++VA
Sbjct: 551 KCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVA 610
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
VLS CSH+GLV EG+ FDMM R I P +EH++CMVDLLGRAG L EA D++ MPM+
Sbjct: 611 VLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMK 670
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
P A VWG LL++C++H N ++AE A +F L + +GSYML++ IYA +G+ +D+A++R
Sbjct: 671 PTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIR 730
Query: 639 ISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
+ KG+KK G SW+EV K+H+F + + + + + L+EL ++ G V
Sbjct: 731 KLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKIARLGYV 786
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 226/488 (46%), Gaps = 55/488 (11%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG- 127
+L+ Y + GRL DA +F P +S WN+++ + Y +L+ +V M + G
Sbjct: 77 MLNGYVKLGRLSDAVELFGRMPARDVAS---WNTLMSGYFQSQQYLASLESFVSMHRSGD 133
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
+ FTF +++C +G +V + G Q + + L+ M+ + G +
Sbjct: 134 SSPNAFTFAYAMKSCGALGERSLALQLLGMVQ----KFGSQDDSDVAAALVDMFVRCGTV 189
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
+ +LF +++ N M G+ + D ALELF M E + V+W ++S+
Sbjct: 190 DLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMP----ERDVVSWNMMVSAL 245
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
++ GR+ E +D+ M+ +G+ + + L+ CA L++ GK +H VI+
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRN------ 299
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
L C+ D VA +AL+ YA+ G EA VF+ L
Sbjct: 300 -----LPCI-----DPYVA---------------SALVELYAKCGCFKEAKGVFNSLH-- 332
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
+R NV +W+ +I F +G E+++LF +M+ + + ++ L+S C
Sbjct: 333 -----DRNNV-AWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMD 386
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L +GR++H ++ + ++V N L++MY KC L+ +F + +KD+++W SMI+
Sbjct: 387 LCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITA 446
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
+ G +A E + + + + A+L A G +G R++++M+ E + P
Sbjct: 447 HSQVG----NIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRP 502
Query: 548 QMEHYACM 555
Y +
Sbjct: 503 DWVTYVTL 510
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 163/388 (42%), Gaps = 56/388 (14%)
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN-LFS 331
+A A L C A + +HG ++ G VF++N L+ Y G + A+ L +
Sbjct: 5 QAFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLT 64
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+I N+++ N ++ Y + G +AVE+F G M +V SW+ ++ + +
Sbjct: 65 DIAHPNVITHNVMLNGYVKLGRLSDAVELF--------GRMPARDVASWNTLMSGYFQSQ 116
Query: 392 RGEEALDLFRKMQLA-KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
+ +L+ F M + N+ T + + C ++ ++ G V + + V
Sbjct: 117 QYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVA 176
Query: 451 NGLLNMYMKCGCLE---------------------EGHL----------VFEQIEKKDLI 479
L++M+++CG ++ G++ +F+ + ++D++
Sbjct: 177 AALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVV 236
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN M+S +G AL +M G + D + + L+AC+ + G+++ +
Sbjct: 237 SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQV 296
Query: 540 VREFRIEPQMEHY--ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK-- 595
+R P ++ Y + +V+L + G +EA + ++ + N W L+ H
Sbjct: 297 IRNL---PCIDPYVASALVELYAKCGCFKEAKGVFNSL-HDRNNVAWTVLIAGFLQHGCF 352
Query: 596 -------NTDVAEAMASQIFGLITETTG 616
N AE M F L T +G
Sbjct: 353 TESVELFNQMRAELMTLDQFALATLISG 380
>gi|255594521|ref|XP_002536106.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223520840|gb|EEF26277.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 358 bits (920), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 190/527 (36%), Positives = 311/527 (59%), Gaps = 22/527 (4%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+L+ YA+ G L A +VF+ P S+ W +++ G +E+A+K++V M K V
Sbjct: 12 ILTGYAKLGTLAKAHSVFDEIP---DRDSVSWTTMIVGYNQMGRFESAIKMFVAMMKDKV 68
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
L FT V +C +G+ G+ +H+ V+++G G V + N L+ MYAK G
Sbjct: 69 LPTQFTVTNVFASCAALGAL----DIGKKIHSFVIKLGLSGCVPVANSLLNMYAKAGDSV 124
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ +FD++R+++ SWN+M S D AL F++M E + VTW S+++ ++
Sbjct: 125 MAKIVFDRMRLRSISSWNIMISLHMHGGRADLALAQFEQMS----ERDVVTWNSMITGYS 180
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ G +E ++LF M + ++ +A +LS CA++ ++GK IH ++I+ F+
Sbjct: 181 QHGFDKEALELFSRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIRTEFDISGV 240
Query: 309 VKNALICVYGKHGDVKVAQNLF--SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
V+NALI +Y K G V++AQ++ S I + N++++ AL+ Y + G A +F L+
Sbjct: 241 VQNALISMYAKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKD 300
Query: 367 LDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
D V++W+A+I + NG ++A++LFR M NS T++ +LSV + A
Sbjct: 301 SD--------VVAWTAMIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVA 352
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK-KDLITWNSMI 485
+LN G++IH +R N ++ V N L+ MY K G + + VF I++ KD ++W SMI
Sbjct: 353 SLNHGKQIHASAIRSGENLSVSVGNALITMYAKAGSITDAQQVFNLIQRNKDTVSWTSMI 412
Query: 486 SGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRI 545
G +GLG+ ++ FE+M+ G KPD + +V VLSAC+H GLV +GR F++M +I
Sbjct: 413 IALGQHGLGQESIELFEKMLALGIKPDHITYVGVLSACTHVGLVEQGRGYFNLMTSIHKI 472
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
EP + HYACM+DL GRAGLLQEA ++NMP+EP+ WG+LL+SC+
Sbjct: 473 EPTLSHYACMIDLFGRAGLLQEAFSFIENMPIEPDVIAWGSLLSSCK 519
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 210/429 (48%), Gaps = 46/429 (10%)
Query: 199 VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD 258
VK SWN + +G+A A +F + + + V+WT+++ + + GR E +
Sbjct: 3 VKTTFSWNTILTGYAKLGTLAKAHSVFDEIP----DRDSVSWTTMIVGYNQMGRFESAIK 58
Query: 259 LFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG 318
+F M K + + V + CA L A +GK IH FVIK G V V N+L+ +Y
Sbjct: 59 MFVAMMKDKVLPTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYA 118
Query: 319 KHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
K GD +A+ +F + ++I SWN +I+ + G D A+ F Q+ + D V+
Sbjct: 119 KAGDSVMAKIVFDRMRLRSISSWNIMISLHMHGGRADLALAQFEQMSERD--------VV 170
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHV 438
+W+++I ++ +G +EAL+LF +M + + T++ +LS CA LN+G++IH ++
Sbjct: 171 TWNSMITGYSQHGFDKEALELFSRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYI 230
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLE-----------------------EGHL------- 468
+R + + +VQN L++MY K G +E +G++
Sbjct: 231 IRTEFDISGVVQNALISMYAKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITP 290
Query: 469 ---VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
+F+ ++ D++ W +MI GY NGL ++A+ F M + G +P+ A+LS S+
Sbjct: 291 ARHIFDSLKDSDVVAWTAMIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSN 350
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
+N G++I +R + ++ + +AG + +A + + + W
Sbjct: 351 VASLNHGKQIHASAIRSGE-NLSVSVGNALITMYAKAGSITDAQQVFNLIQRNKDTVSWT 409
Query: 586 TLLNSCRMH 594
+++ + H
Sbjct: 410 SMIIALGQH 418
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 81/167 (48%), Gaps = 12/167 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H I +G N S + ++++YA+ G + DA+ VF + + S W S++
Sbjct: 358 KQIHASAIRSGENLSVSVGNALITMYAKAGSITDAQQVFNLIQRNKDTVS--WTSMIIAL 415
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG---SFRFRFSFGQIVHNHVLQ 164
+GL + +++L+ KM LG+ D T+ V+ AC +G R F+ +H
Sbjct: 416 GQHGLGQESIELFEKMLALGIKPDHITYVGVLSACTHVGLVEQGRGYFNLMTSIHK---- 471
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFS 210
+ + +I ++ + G + ++F + + ++ + I+W + S
Sbjct: 472 --IEPTLSHYACMIDLFGRAGLLQEAFSFIENMPIEPDVIAWGSLLS 516
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 358 bits (920), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 215/728 (29%), Positives = 367/728 (50%), Gaps = 114/728 (15%)
Query: 37 LLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+LQ C K++ K+V N + G + L +++ +Y G L +A VF+ +
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIE- 158
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+L WN ++ +G + ++ L+ KM GV D +TF V ++ + S
Sbjct: 159 --KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH---- 212
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H +L+ GF + N L+ Y K ++ + K+FD++ ++ ISWN + +G+
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTS------------------------------- 242
N + L +F +M + G+E + T S
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 243 ----LLSSHARCGRLE-------------------------------ETMDLFDMMRKRG 267
LL +++CG L+ E + LF+ M + G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
I + VL+ CA GK +H ++ + +FV NAL+ +Y K G ++ A+
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+FSE+ K+I+SWN +I Y++ +EA+ +F+ L
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL----------------------- 489
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
++ + + T++ +L CA +A + GREIHG+++R +
Sbjct: 490 ---------------LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
V N L++MY KCG L H++F+ I KDL++W MI+GYGM+G G+ A+A F +M +A
Sbjct: 535 HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
G + D ++FV++L ACSH+GLV+EG R F++M E +IEP +EHYAC+VD+L R G L +
Sbjct: 595 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 654
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A ++NMP+ P+A +WG LL CR+H + +AE +A ++F L E TG Y+L++NIYA
Sbjct: 655 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAE 714
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
+ +WE ++R +GL+K G SWIE+K ++++F +G+S + +N+ L ++ +
Sbjct: 715 AEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRAR 774
Query: 688 MENKGCVP 695
M +G P
Sbjct: 775 MIEEGYSP 782
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 195/450 (43%), Gaps = 78/450 (17%)
Query: 22 SIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFD 81
S + ++ C +++H +Q+H ++ +G + +++ Y + R+
Sbjct: 189 SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDS 248
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
AR VF+ + + WNSI+ VSNGL E L ++V+M G+ D T V
Sbjct: 249 ARKVFDEMT---ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C R S G+ VH+ ++ F N L+ MY+K G + + +F ++ ++
Sbjct: 306 C---ADSRL-ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS--------------- 246
+S+ M +G+A A++LF+ ME EG+ P+ T T++L+
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 247 --------------------HARCGRLEETMDLFDMMRKRGI------------------ 268
+A+CG ++E +F MR + I
Sbjct: 422 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481
Query: 269 --------------EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
+A VL CA L+A G+ IHG++++ G+ V N+L+
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
+Y K G + +A LF +I K++VSW +I Y G EA+ +F+Q+ + +E
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ---AGIE- 597
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+ IS+ +++ A + +G +E F M+
Sbjct: 598 ADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 194/433 (44%), Gaps = 46/433 (10%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
+ + + K+VH + F++ ++ +YA+ G + +A VF + WN
Sbjct: 411 RLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV---KDIISWN 467
Query: 102 SILRVNVSNGLYENALKLY-VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
+I+ N AL L+ + + + D T V+ AC + +F G+ +H
Sbjct: 468 TIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF----DKGREIHG 523
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
++++ G+ + H+ N L+ MYAK G + + LFD + K+ +SW +M +G+ ++
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 583
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVL 279
A+ LF +M G+E + +++ SLL + + G ++E F++MR IE E A ++
Sbjct: 584 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 643
Query: 280 SVCADLAADHMGKVI--HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS---EIE 334
+ A G +I + F+ + AL+C H DVK+A+ + E+E
Sbjct: 644 DMLA-----RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELE 698
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV-ISWSAVIG------AF 387
+N + + YAEA E E +L K G R N SW + G A
Sbjct: 699 PENTGYYVLMANIYAEA----EKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAG 754
Query: 388 ASNGRGEEALDLFRKMQLAKVVA---NSVTISGLL---------SVCAESA----ALNIG 431
S+ E ++ F + A+++ + +T L+ ++C S AL I
Sbjct: 755 DSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGII 814
Query: 432 REIHGHVVRVSMN 444
HG ++RV+ N
Sbjct: 815 SSGHGKIIRVTKN 827
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 207/665 (31%), Positives = 364/665 (54%), Gaps = 68/665 (10%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
K+ Q +Q+H Q++ A++ L+ +LSIY+ L D+ +F T F +L W
Sbjct: 20 KSRSQAQQLHAQVLKFQASSLCNLSL-LLSIYSHINLLHDSLRLFNTIHF---PPALAWK 75
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
S++R S+GL +L ++ M G+ D FP V+++C + + G+ +H +
Sbjct: 76 SVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALL----MDLNLGESLHGY 131
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFK-------LFDKV--RVKNYISWNMMFSGF 212
++++G +++ N L+ MY+K+ + +S + +FD++ R ++ + +++
Sbjct: 132 IIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSE-- 189
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
D ++F+ M E + V+W ++++ +AR G EET+ + M ++ +
Sbjct: 190 ------DSVRKIFEMMP----EKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDS 239
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
++ VL + A+ GK IHG I+ G + ++V ++LI +Y K V
Sbjct: 240 FTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVA-------- 291
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
++ VF+ L + DG ISW+++I NG
Sbjct: 292 -----------------------DSCRVFTLLTERDG--------ISWNSIIAGCVQNGL 320
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
+E L FR+M +AK+ S + S ++ CA L++G+++HG++ R ++NI + +
Sbjct: 321 FDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASS 380
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++MY KCG + +F+++ +D+++W +MI G ++G +A+ FE+M G KP+
Sbjct: 381 LVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPN 440
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
VAF+AVL+ACSH GLV+E + F+ M R+F I P +EHYA + DLLGRAG L+EA D +
Sbjct: 441 HVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFI 500
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
M + P +W TLL++CR+H N D+AE +A++I + TG+Y+LL+NIY+A+ RW+
Sbjct: 501 CGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWK 560
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
+AAK R S + G++K SWIEVK K++ F +G+ + + E +E L ME +G
Sbjct: 561 EAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEG 620
Query: 693 CVPDN 697
VPD
Sbjct: 621 YVPDT 625
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 184/379 (48%), Gaps = 27/379 (7%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
L+ + I + K++H I G +A ++A+ ++ +YA+ R+ D+ VF +
Sbjct: 248 LIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLL---TERD 304
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
+ WNSI+ V NGL++ L+ + +M + ++F ++ AC + + G+
Sbjct: 305 GISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLH----LGK 360
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H ++ + GF N+ I + L+ MYAK G + + ++FD++R+++ +SW M G AL+
Sbjct: 361 QLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHG 420
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAI 275
A+ELF++ME EG++PN V + ++L++ + G ++E F+ M R GI G E
Sbjct: 421 QAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHY 480
Query: 276 AVVLSVCADLAADHMGKV-----IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ--- 327
A V +D +G+ + F+ + L+ H ++ +A+
Sbjct: 481 AAV--------SDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVA 532
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
N E++ N ++ L Y+ A EA + + + ++ + + SW V
Sbjct: 533 NRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRI---GIRKTPACSWIEVKNKV 589
Query: 388 ASNGRGEEALDLFRKMQLA 406
+ G+E+ + K++ A
Sbjct: 590 YAFMAGDESHPCYEKIREA 608
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 358 bits (919), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 227/715 (31%), Positives = 373/715 (52%), Gaps = 75/715 (10%)
Query: 1 MRHSLLHQPHQFSPSNPSRPFSIITYNNSLLD--CFDHLLQQCKTIHQLK---QVHNQLI 55
+RH+L H SP+ R F + + D F + + C I + +H +I
Sbjct: 98 IRHAL----HFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVI 153
Query: 56 VTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYEN 115
G ++ F+ V+S+Y + + AR VF+ + S+ WNSI+ V +
Sbjct: 154 RLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNV 213
Query: 116 ALKLYVKMR-KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIV 174
A+ L+ +M G+L D ++ C ++G G+ VH ++ G +V +
Sbjct: 214 AVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLC----GRQVHGFCVRSGLVEDVFVG 269
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N L+ MYAK G+M D+ K+F+++R K+ ++WN M +G++ N + AL LF +M E +E
Sbjct: 270 NALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIE 329
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
+ VTW+S++S +A+ G E MD+F M + +LS CA + A GK
Sbjct: 330 SDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKET 389
Query: 295 H----GFVIKGGFEDY---VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
H F++KG D + V NALI +Y K ++VA+ +F EI K+
Sbjct: 390 HCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKD---------- 439
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
+V++W+ +IG +A +G AL LF +M
Sbjct: 440 ---------------------------RDVVTWTVMIGGYAQHGDANHALQLFSEMFKID 472
Query: 408 --VVANSVTISGLLSVCAESAALNIGREIHGHVVRVS-MNKNIL-VQNGLLNMYMKCGCL 463
+V N TIS +L CA AAL G++IH +V+R S ++ ++L V N L++MY K G +
Sbjct: 473 NCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDV 532
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
+ +VF+ + K++ ++W S+++GYGM+G E+A F+EM + DG+ F+ VL AC
Sbjct: 533 DTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYAC 592
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
SH+G+ +F ++P +EHYACMVDLLGRAG L EA ++ +MP+EP V
Sbjct: 593 SHSGM-------------DFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVV 639
Query: 584 WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKT 643
W LL++CR+H N ++AE A ++ L + G+Y LLSNIYA + RW+D A++ K
Sbjct: 640 WIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIGYLMKR 699
Query: 644 KGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
G+KK+ G SW++ ++ + F G+ + + E L +L +++ + D D
Sbjct: 700 TGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADLIKRIKANFSLHDVD 754
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 174/609 (28%), Positives = 300/609 (49%), Gaps = 65/609 (10%)
Query: 11 QFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFL-AARV 69
+F N P I T+N L QQCKT+ Q K +H Q I+ G +++ +
Sbjct: 4 RFPLFNSKPPLLINTHNLLLYHSSTISKQQCKTLTQAKLLHQQYIINGHLLNSYTNVTNL 63
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL 129
+ Y + +A + E SS WN ++R + AL+L+ +M+ L
Sbjct: 64 IYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWT 123
Query: 130 GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD 189
D +TFP V +AC + +F G +H V+++GF+ NV + N +I MY K +
Sbjct: 124 PDHYTFPFVFKACGEISNFE----LGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVH 179
Query: 190 SFKLFDKVRVK---NYISWNMMFSGFALNFDCDGALELFKRMEL-EGLEPNFVTWTSLLS 245
+ K+FD++ + + ++WN + S ++ F + A+ LF+ M + G+ P+ V
Sbjct: 180 ARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTV------- 232
Query: 246 SHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
+ +L VC L G+ +HGF ++ G +
Sbjct: 233 ----------------------------GVVNILPVCGYLGLGLCGRQVHGFCVRSGLVE 264
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL- 364
VFV NAL+ +Y K G ++ A +F + K++V+WNA++T Y++ G ++A+ +F ++
Sbjct: 265 DVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMR 324
Query: 365 -EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
EK++ +V++WS+VI +A G G EA+D+FR+M + N VT+ LLS CA
Sbjct: 325 EEKIES------DVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACA 378
Query: 424 ESAALNIGREIHGHVVRVSM-------NKNILVQNGLLNMYMKCGCLEEGHLVFEQI--E 474
AL G+E H + V+ + ++ V N L++MY KC LE +F++I +
Sbjct: 379 SVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPK 438
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEM--IEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+D++TW MI GY +G +AL F EM I+ P+ VL AC+ + G
Sbjct: 439 DRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFG 498
Query: 533 RRIFDMMVREFRIEPQMEHYA-CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
++I ++R RI+ + A C++D+ ++G + A + +M + NA W +LL
Sbjct: 499 KQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAVSWTSLLTGY 557
Query: 592 RMHKNTDVA 600
MH ++ A
Sbjct: 558 GMHGRSEDA 566
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 358 bits (919), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 200/668 (29%), Positives = 341/668 (51%), Gaps = 84/668 (12%)
Query: 33 CFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA 89
C +L C ++ L +++H ++ +G + +L + ++ +Y + G + +A N+F +
Sbjct: 214 CVSSILS-CSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSI 272
Query: 90 --PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
+ ++++WN ++ VSNG + AL L++KM G+ D T + C S
Sbjct: 273 LDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLC----S 328
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
+FG+ +H + + G + N+ + L+ MY K G M K+F R +N+
Sbjct: 329 ESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFR--RSQNH----- 381
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
N + W++++S+ A+ G + ++LF +
Sbjct: 382 ----------------------------NLIMWSAVISNCAQSGCPTKALELFYEFKMED 413
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
+ + VL C+ L G IHG K GF VFV +AL+ +Y K D+ ++
Sbjct: 414 GLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSK 473
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+F + +K++VS W+A+I +
Sbjct: 474 KVFLRLSQKDLVS---------------------------------------WNALISGY 494
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
A + +EAL FR MQL ++ N+VTI+ +LSVCA + + + +E+HG+++R + +
Sbjct: 495 AQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTV 554
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
LV N L+ Y KCG + FE++ +++ ++WNS+I G GM+ + + F++M+ +
Sbjct: 555 LVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNSIILGMGMHSRTDEMIVLFDKMVAS 614
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
G KPD V F A+LSACSHAG V+EG + F MV +F ++PQ+E Y CMVDLLGRAG L +
Sbjct: 615 GIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQ 674
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A D++ MP P+ +WG+LL SC+ H + +AE +A+ IF L+ + G +LL+N+Y
Sbjct: 675 AYDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIVANHIFKLVPSSVGYRVLLANLYEN 734
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
G+ + +KVR K GLKK G SWIEV H+F +G+ S + +E L +
Sbjct: 735 LGKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNFHIFIAGDRSHSQSDEIYAAVESLTTE 794
Query: 688 MENKGCVP 695
++ G +P
Sbjct: 795 IKRAGYIP 802
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 214/449 (47%), Gaps = 87/449 (19%)
Query: 101 NSILRVNVSNGLYENALKLYVKMRKLGVLGDGF-TFPLVIRACKFMGSFRFRFSFGQIVH 159
N+++R +G +++A+ +Y+KM GV + F FP +I+A G + G+ +H
Sbjct: 77 NNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKA---FGGLCDVYK-GRQIH 132
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
HVL++G +V +VN L+ MY K G + D+ ++F+K+ + +SWN M SGF + D
Sbjct: 133 GHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYT 192
Query: 220 GALELFKRMELE-GLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
+L F+ M E G+ PN V ++ +
Sbjct: 193 RSLMFFRSMVWEFGIYPNRVA----------------------------------CVSSI 218
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK-- 336
LS C+ L + G+ IHG V+K G + ++ ++LI +Y K G +K A+N+F+ I +K
Sbjct: 219 LS-CSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDS 277
Query: 337 ---NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
N V WN +I+ Y G FSQ
Sbjct: 278 VRRNAVIWNVMISGYVSNG-------CFSQ------------------------------ 300
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
AL LF KM + + + T+ L S+C+ES + G++IHG + + + NI V+ L
Sbjct: 301 --ALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETAL 358
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM-IEAGFKPD 512
L+MY+KCG + G +F + + +LI W+++IS +G AL F E +E G
Sbjct: 359 LDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADS 418
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
G+ VAVL ACS L EG +I + +
Sbjct: 419 GI-LVAVLRACSSLTLKPEGMQIHGLATK 446
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 95/166 (57%), Gaps = 10/166 (6%)
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
GR+IHGHV+++ + ++ V N LL MY KCG +E+ +FE++ + DL++WN+MISG+
Sbjct: 128 GRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQK 187
Query: 491 NGLGENALATFEEMI-EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
+ +L F M+ E G P+ VA V+ + +CS + GR I ++V+ +
Sbjct: 188 SMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKS---GLDV 244
Query: 550 EHY--ACMVDLLGRAGLLQEASDIVKNM----PMEPNAYVWGTLLN 589
E Y + ++++ + G ++ A +I ++ + NA +W +++
Sbjct: 245 EEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMIS 290
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
I N + C + + K+VH LI G ++ ++ +++ YA+ G + +
Sbjct: 515 IRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSL 574
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
FE P + + + WNSI+ + + + L+ KM G+ D TF ++ AC
Sbjct: 575 YTFEKMP---ERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACS 631
Query: 144 FMG 146
G
Sbjct: 632 HAG 634
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 191/576 (33%), Positives = 316/576 (54%), Gaps = 64/576 (11%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
VH+ V + F N + +L+ YA G+ + +FD + +N I +N+M + N
Sbjct: 54 VHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHL 113
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
D AL +F+ M G P+ T+
Sbjct: 114 YDDALLVFRDMVSGGFSPDHYTY-----------------------------------PC 138
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
VL C+ +G +HG V K G + +FV N LI +YGK G + A+ + E++ K+
Sbjct: 139 VLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKD 198
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQL----EKLDGGSM--------------------- 372
+VSWN+++ YA+ D+A+++ ++ +K D +M
Sbjct: 199 VVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENVLYVEEM 258
Query: 373 ----ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
E+ +++SW+ +I + N +++DL+ +M +V +++T + +L C + +AL
Sbjct: 259 FMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDLSAL 318
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+GR IH +V R + N+L++N L++MY +CGCLE+ VF++++ +D+ +W S+IS Y
Sbjct: 319 LLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAY 378
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
GM G G NA+A F EM +G PD +AFVA+LSACSH+GL+NEG+ F M +++I P
Sbjct: 379 GMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPI 438
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
+EH+AC+VDLLGR+G + EA +I+K MPM+PN VWG LL+SCR++ N D+ A ++
Sbjct: 439 IEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNMDIGILAADKLL 498
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L E +G Y+LLSNIYA +GRW + +R K + ++K+ G S +E+ ++H F +G+
Sbjct: 499 QLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGD 558
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ K + E L L +M+ G VP D L ++
Sbjct: 559 TYHPQSKEIYEELSVLVGKMKELGYVPKTDSALHDV 594
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 215/436 (49%), Gaps = 46/436 (10%)
Query: 3 HSLLHQPHQFSPSNPSRPFSIITYNNSLL--DCFDHLLQQCKTIHQLKQVHNQLIVTGAN 60
H L HQ + S S+++ N +L + +L Q I LK VH+++ +
Sbjct: 5 HPLTHQFPKLQALVSSIRKSLVSPQNPVLVLELLGKVLDQYPDIKTLKNVHSKVFNLSFH 64
Query: 61 ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY 120
+ L +++ YA G ARNVF+ P + + + +N ++R ++N LY++AL ++
Sbjct: 65 ENPSLGIKLMRAYAARGEPGLARNVFDVIP---ERNVIFYNVMIRSYMNNHLYDDALLVF 121
Query: 121 VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
M G D +T+P V++AC + R G +H V ++G N+ + N LI +
Sbjct: 122 RDMVSGGFSPDHYTYPCVLKACSCSDNLRI----GLQLHGAVFKVGLDLNLFVGNGLIAL 177
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN---- 236
Y K G + ++ + D+++ K+ +SWN M +G+A N D AL++ + M+ +P+
Sbjct: 178 YGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTM 237
Query: 237 -----------------------------FVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
V+W ++S + + +++DL+ M K
Sbjct: 238 ASLLPAVTNTSSENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCE 297
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
+E A A VL C DL+A +G+ IH +V + + ++N+LI +Y + G ++ A+
Sbjct: 298 VEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAK 357
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+F ++ +++ SW +LI++Y G AV +F++++ S + P+ I++ A++ A
Sbjct: 358 RVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQ----NSGQSPDSIAFVAILSAC 413
Query: 388 ASNGRGEEALDLFRKM 403
+ +G E F++M
Sbjct: 414 SHSGLLNEGKFYFKQM 429
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 178/391 (45%), Gaps = 38/391 (9%)
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIE----EKNIVSWNALITSYAEAGLCDEAVE 359
++ V V L V ++ D+K +N+ S++ +N L+ +YA G A
Sbjct: 29 QNPVLVLELLGKVLDQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARN 88
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
VF + ER NVI ++ +I ++ +N ++AL +FR M + T +L
Sbjct: 89 VFDVIP-------ER-NVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVL 140
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
C+ S L IG ++HG V +V ++ N+ V NGL+ +Y KCGCL E V ++++ KD++
Sbjct: 141 KACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVV 200
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WNSM++GY N ++AL EM KPD ++L A ++ +E + M
Sbjct: 201 SWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTS--SENVLYVEEM 258
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM---PMEPNAYVWGTLLNSCRMHKN 596
+ + + M+ + + + ++ D+ M +EP+A ++L +C
Sbjct: 259 FMNLE-KKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRAC----- 312
Query: 597 TDVAEAMASQIFGLITETTG--SYMLLSN----IYAASGRWEDAAKVRISAKTKGLKK-- 648
D++ + + E MLL N +YA G EDA +V K + +
Sbjct: 313 GDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWT 372
Query: 649 -------VAGQSWIEVKRKIHMFSSGNSLQS 672
+ GQ + V M +SG S S
Sbjct: 373 SLISAYGMTGQGYNAVALFTEMQNSGQSPDS 403
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 222/710 (31%), Positives = 354/710 (49%), Gaps = 111/710 (15%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F LL C ++ + VH ++++T + F+ R++ +Y + L DAR +F+ P
Sbjct: 18 FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77
Query: 91 FDCKSSSLLWNSILRVNVSNGL-------------------------------YENALKL 119
+ ++ WNS++ V +G +E +L+
Sbjct: 78 ---QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEY 134
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
+VKM + L + ++F + AC + + G VH V + + +V++ + LI
Sbjct: 135 FVKMHREDFLLNEYSFGSALSACAGL----MDLNMGTQVHALVSKSRYSTDVYMGSALID 190
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MY+K G ++ + ++F + +N ++WN + + + N ALE+F RM GLEP+ VT
Sbjct: 191 MYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVT 250
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
+A V+S CA L A G IH V+
Sbjct: 251 -----------------------------------LASVVSACASLCALKEGLQIHARVV 275
Query: 300 KGG-FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
K F D + + NAL+ +Y K V A+ +F + +N+VS ++++ YA A A
Sbjct: 276 KTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAAR 335
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
+FS+ M + NV+SW+A+I + NG EEAL LFR ++ + T L
Sbjct: 336 FMFSK--------MTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNL 387
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
L +I V N L++MYMKCG +E+G VFE+++++D
Sbjct: 388 L------------------------KSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDC 423
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
++WN++I GY NG G AL F +M+ G KPD V + VL ACSHAGLV EGR F
Sbjct: 424 VSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFS 483
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
M E + P +HY CMVDLLGRAG L EA ++++ MP+ P+A VWG+LL +C++H N +
Sbjct: 484 M-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIE 542
Query: 599 VAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
+ + A ++ + +G Y+LLSN+YA GRW D +VR + +G+ K G SWIEV+
Sbjct: 543 MGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVE 602
Query: 659 RKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD-NDIILWEMMGK 707
++H+F + K + VL+ L QM+ G +PD ND ++ K
Sbjct: 603 SRVHVFLVKDKSHPHRKQIYSVLKMLTEQMKRVGYIPDANDFEAYDEQSK 652
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 115/241 (47%), Gaps = 39/241 (16%)
Query: 28 NSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
N+L+D + +C +++ ++V +++ + + + +S YAR + AR +F
Sbjct: 288 NALVDMY----AKCSKVNEARRVFDRMSIRNVVSETSM----VSGYARAASVKAARFMFS 339
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
+ + + WN+++ NG E AL+L+ +++ + +TF ++++ F+G
Sbjct: 340 KMT---QRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVG- 395
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
N LI MY K G + D ++F+K++ ++ +SWN
Sbjct: 396 ---------------------------NSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNA 428
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
+ G+A N AL++F++M + G +P+ VT +L + + G +EE F M + G
Sbjct: 429 IIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHG 488
Query: 268 I 268
+
Sbjct: 489 L 489
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 35/226 (15%)
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+ NS + LL C S + R +H ++ + I +QN L+++Y KC CL++
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 469 VFEQIEKK-------------------------------DLITWNSMISGYGMNGLGENA 497
+F+++ ++ D +WNSM+SG+ + E +
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
L F +M F + +F + LSAC+ +N G ++ +V + R + + ++D
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVH-ALVSKSRYSTDVYMGSALID 190
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+ + G + A ++ M +E N W +L+ +C +N +EA+
Sbjct: 191 MYSKCGSVACAEEVFSGM-IERNLVTWNSLI-TC-YEQNGPASEAL 233
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 187/503 (37%), Positives = 289/503 (57%), Gaps = 17/503 (3%)
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
D ++ LF R + P+ WT+++ HA G E+ ++ + M +G+E A + +
Sbjct: 26 DYSVALFGRTQ----NPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSI 81
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
L +C GK +H +K GF+ ++V+ L+ VY + GDV AQ LF + EK++
Sbjct: 82 LKLCPI----EPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSL 137
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
VS A++T YA+ G D A +F +E+ DG + W+ +I + NG EAL
Sbjct: 138 VSLTAMLTCYAKHGELDAARVLFDGMEERDG--------VCWNVMIDGYTQNGMPNEALV 189
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
LFR+M AK N VT+ +LS C + AL GR +H ++ + N+ V L++MY
Sbjct: 190 LFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYS 249
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
KCG LE+ LVF++I+ KD++ WNSMI GY M G + AL F+ M G P + F+
Sbjct: 250 KCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIG 309
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
+LSAC H+G V EG IF+ M E+ IEP++EHY CMV+LLGRAG +++A ++VKNM +E
Sbjct: 310 ILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIE 369
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
P+ +WGTLL +CR+H + E + + +G+Y+LLSNIYAA G W+ A++R
Sbjct: 370 PDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLR 429
Query: 639 ISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
K G+KK G S IEV K+H F +G K + +LEE+ +++ G P D
Sbjct: 430 TMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTD 489
Query: 699 IILWEMMGKKNVKRIQRIRADNI 721
I+L + +G+ +R + ++ +
Sbjct: 490 IVLHD-IGETEKERSLEVHSEKL 511
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 165/332 (49%), Gaps = 19/332 (5%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
YA GRL + +F S W +I+ + GL+E AL Y +M GV +
Sbjct: 19 YASLGRLDYSVALFGRTQ---NPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNA 75
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
FTF +++ C G+ +H+ +++GF ++++ L+ +YA+ G + + +
Sbjct: 76 FTFSSILKLCP--------IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQ 127
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
LFD + K+ +S M + +A + + D A LF ME E + V W ++ + + G
Sbjct: 128 LFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGME----ERDGVCWNVMIDGYTQNGM 183
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
E + LF M K + + VLS C L A G+ +H ++ G + V V A
Sbjct: 184 PNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTA 243
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
L+ +Y K G ++ A+ +F +I++K++V+WN++I YA G EA+++F + ++
Sbjct: 244 LVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMG---- 299
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
P I++ ++ A +G E D+F KM+
Sbjct: 300 LHPTNITFIGILSACGHSGWVTEGWDIFNKMK 331
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 34/269 (12%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP--- 90
F +L+ C I K +H+Q + G ++ ++ +L +YAR G + A+ +F+T P
Sbjct: 78 FSSILKLC-PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKS 136
Query: 91 -----------------------FDC--KSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
FD + + WN ++ NG+ AL L+ +M K
Sbjct: 137 LVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLK 196
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
+ T V+ AC +G+ G+ VH+++ G Q NVH+ L+ MY+K G
Sbjct: 197 AKAKPNEVTVLSVLSACGQLGALES----GRWVHSYIENNGIQFNVHVGTALVDMYSKCG 252
Query: 186 QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
+ D+ +FDK+ K+ ++WN M G+A+ AL+LFK M GL P +T+ +LS
Sbjct: 253 SLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILS 312
Query: 246 SHARCGRLEETMDLFDMMRKR-GIEVGAE 273
+ G + E D+F+ M+ GIE E
Sbjct: 313 ACGHSGWVTEGWDIFNKMKDEYGIEPKIE 341
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 358 bits (918), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 189/549 (34%), Positives = 307/549 (55%), Gaps = 72/549 (13%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
VH ++ GF + + +LI M++++ + ++ K+FDK R + WN +F AL
Sbjct: 91 VHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGR 150
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
+ LEL+ RM + G+ + T+T LL + C V +E +
Sbjct: 151 GNDVLELYPRMNMMGVSSDRFTYTYLLKA---C-------------------VASECLVS 188
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
L GK IH +++ G+ +V V L+ +Y + G V A +F E+ KN
Sbjct: 189 FL---------QKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKN 239
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
V+SWSA+I +A NG+ EAL
Sbjct: 240 ---------------------------------------VVSWSAMIACYAKNGKPYEAL 260
Query: 398 DLFRKMQL--AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
+LFR+M L V NSVT+ +L CA AAL G+ IH +++R ++ + V + L+
Sbjct: 261 ELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALIT 320
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY +CG LE G L+F+++ KKD++ WNS+IS YG++G G A+ FEEMI+ GF P ++
Sbjct: 321 MYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHIS 380
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
F++VL ACSH GLV EG+++F+ MV+E I+P +EHYACMVDLLGRA L EA+ I++++
Sbjct: 381 FISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDL 440
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
+EP VWG+LL +CR+H + ++AE + ++F L G+Y+LL++IYA + W++
Sbjct: 441 RIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVK 500
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
+V+ ++ L+KV G+SWIEV+RKI+ F+S + + + +L L+ +M+ +G P
Sbjct: 501 RVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTP 560
Query: 696 DNDIILWEM 704
++L+++
Sbjct: 561 QTKLVLYDL 569
Score = 169 bits (428), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 200/407 (49%), Gaps = 60/407 (14%)
Query: 1 MRHSLLHQPHQFSPSNPSRPFSIIT--YNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTG 58
++ +L H+ +P+ + I++ NSL D D VH L+ G
Sbjct: 54 LKQALYLLSHESNPTQQTCELLILSAARRNSLSDALD--------------VHQLLVDGG 99
Query: 59 ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
+ FLA +++++++ + +AR VF+ K + +WN++ R G + L+
Sbjct: 100 FDQDPFLATKLINMFSELDTVDNARKVFDKTR---KRTIYVWNALFRALALAGRGNDVLE 156
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
LY +M +GV D FT+ +++AC G+ +H H+L+ G+ +VH++ L+
Sbjct: 157 LYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLM 216
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE--PN 236
MYA+ G +S + +FD++ VKN +SW+ M + +A N ALELF+ M L + PN
Sbjct: 217 DMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPN 276
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
VT S VL CA AA GK+IH
Sbjct: 277 SVTMVS-----------------------------------VLQACAAFAALEQGKLIHA 301
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
++++ G + + V +ALI +Y + G ++ Q +F + +K++V WN+LI+SY G +
Sbjct: 302 YILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRK 361
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
A+++F ++ +D G P+ IS+ +V+GA + G EE LF M
Sbjct: 362 AIKIFEEM--IDHGF--SPSHISFISVLGACSHTGLVEEGKKLFESM 404
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 184/384 (47%), Gaps = 37/384 (9%)
Query: 34 FDHLLQQCKT-------IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
+ +LL+ C + + K++H ++ G A + ++ +YARFG + A VF
Sbjct: 173 YTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVF 232
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM--RKLGVLGDGFTFPLVIRACKF 144
+ P + + W++++ NG AL+L+ +M + + T V++AC
Sbjct: 233 DEMPV---KNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAA 289
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
+ G+++H ++L+ G + +++ LI MYA+ G++ +FD++ K+ +
Sbjct: 290 FAALEQ----GKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVL 345
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MM 263
WN + S + L+ A+++F+ M G P+ +++ S+L + + G +EE LF+ M+
Sbjct: 346 WNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMV 405
Query: 264 RKRGIEVGAEAIAVVLSVCADL-AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
++ GI+ E A ++ + D K+I I+ G + V +L+ H
Sbjct: 406 KEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPK----VWGSLLGACRIHCH 461
Query: 323 VKVAQ----NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
V++A+ LF ++E N ++ L YAEA + DE V + LD +++
Sbjct: 462 VELAERASKRLF-KLEPTNAGNYVLLADIYAEAEMWDEVKRV---KKLLDSRELQKVPGR 517
Query: 379 SWSAV---IGAFAS----NGRGEE 395
SW V I +F S N +GE+
Sbjct: 518 SWIEVRRKIYSFTSVDEFNPQGEQ 541
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 84/194 (43%), Gaps = 8/194 (4%)
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
T L+ A +L+ ++H +V +++ + L+NM+ + ++ VF++
Sbjct: 71 TCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKT 130
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA----GLV 529
K+ + WN++ + G G + L + M G D + +L AC + +
Sbjct: 131 RKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFL 190
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+G+ I ++R + ++D+ R G + AS + MP++ N W ++
Sbjct: 191 QKGKEIHAHILRH-GYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVK-NVVSWSAMI- 247
Query: 590 SCRMHKNTDVAEAM 603
+C KN EA+
Sbjct: 248 ACYA-KNGKPYEAL 260
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 191/552 (34%), Positives = 299/552 (54%), Gaps = 47/552 (8%)
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G VH H+L G Q + ++++ YA G + S +F+ +
Sbjct: 88 LGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIG--------------- 132
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
EP+ + + S++ ++AR G E T+ + M G
Sbjct: 133 --------------------EPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYF 172
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
VL +L + MGK +HG +++ G + ++V +LI +YGK G++ A +F +
Sbjct: 173 TFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNM 232
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
+++ SWNAL+ Y ++G D A+ +F + M N++SW+ +I ++ +G
Sbjct: 233 TIRDVSSWNALLAGYTKSGCIDAALAIFER--------MPWRNIVSWTTMISGYSQSGLA 284
Query: 394 EEALDLFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
++AL LF +M + + V N VTI +L CA+ + L GR+IH R+ +N N V
Sbjct: 285 QQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLI 344
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEK--KDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
L MY KCG L + F+++ + K+LI WN+MI+ Y G G A++TF EMI+AG
Sbjct: 345 ALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGI 404
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
+PD + F +LS CSH+GLV+ G + F+ M + I P++EHYAC+ DLLGRAG L EAS
Sbjct: 405 QPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEAS 464
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASG 629
+V MPM +WG+LL +CR H+N ++AE A ++F L E TG+Y+LLSN+YA +G
Sbjct: 465 KLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAG 524
Query: 630 RWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
RW++ K+R K++G KK G SWIE+ K HMF G++ K + LE L +M+
Sbjct: 525 RWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMK 584
Query: 690 NKGCVPDNDIIL 701
G PD +L
Sbjct: 585 AAGYFPDTSYVL 596
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 214/444 (48%), Gaps = 56/444 (12%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
QVH +++ G +A + +++++ YA G + + +VF + SSLL+NS++R
Sbjct: 91 QVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGI---GEPSSLLFNSMIRAYA 147
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
G E + Y M G GD FTFP V+++ + S G+ VH +L++G Q
Sbjct: 148 RYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWM----GKCVHGLILRIGLQ 203
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
++++ LI +Y K G+++D+ K+FD + +++ SWN + +G+ + D AL +F+RM
Sbjct: 204 FDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERM 263
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR--GIEVGAEAIAVVLSVCADLA 286
N V+WT+++S +++ G ++ + LFD M K G+ I VL CA L+
Sbjct: 264 PWR----NIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLS 319
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI--EEKNIVSWNAL 344
G+ IH + G V AL +Y K G + A+N F ++ EKN+++WN +
Sbjct: 320 TLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTM 379
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
IT+YA S G G +A+ FR+M
Sbjct: 380 ITAYA---------------------------------------SYGHGLQAVSTFREMI 400
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHV-VRVSMNKNILVQNGLLNMYMKCGCL 463
A + + +T +GLLS C+ S +++G + H+ S+N + + ++ + G L
Sbjct: 401 QAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRL 460
Query: 464 EEG-HLVFEQIEKKDLITWNSMIS 486
E LV E W S+++
Sbjct: 461 AEASKLVGEMPMPAGPSIWGSLLA 484
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 6/178 (3%)
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L +G ++H H++ + LV + ++ Y G ++ VF I + + +NSMI
Sbjct: 86 LKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRA 145
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
Y G E +AT+ M GF D F VL + V G+ + +++ RI
Sbjct: 146 YARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLIL---RIGL 202
Query: 548 QMEHYAC--MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
Q + Y ++ L G+ G + +A + NM + + W LL D A A+
Sbjct: 203 QFDLYVATSLIILYGKCGEINDAGKVFDNMTIR-DVSSWNALLAGYTKSGCIDAALAI 259
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 108/239 (45%), Gaps = 22/239 (9%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
Q T+ + +Q+H G N++A + + ++YA+ G L DARN F+ + K + +
Sbjct: 317 QLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEK-NLIA 375
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN+++ S G A+ + +M + G+ D TF ++ C G G
Sbjct: 376 WNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSG----LVDVGLKYF 431
Query: 160 NHVLQMGFQGNVHIVNELIGMYA-------KMGQMSDSFKLFDKVRVKNYIS-WNMMFSG 211
NH+ + +N + YA + G+++++ KL ++ + S W + +
Sbjct: 432 NHM------STTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAA 485
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
+ + + A +++ + LEP LLS+ +A GR +E L +++ +G +
Sbjct: 486 CRKHRNLEMAETAARKLFV--LEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTK 542
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 358 bits (918), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 219/667 (32%), Positives = 338/667 (50%), Gaps = 91/667 (13%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARF--GRLFDARNVFETAPFDCK 94
+L+QCKTI L ++H LI T +A +L A + A ++F +
Sbjct: 30 ILEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQID---E 86
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
S +N ++R A+ L+ +M + V D FTFP +++ C + + S
Sbjct: 87 PDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQAL----SE 142
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ +H +++ GF + + N LI MYA G++ + ++FD++
Sbjct: 143 GEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMS---------------- 186
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
E N TW S+ + + + G EE + LF M + I
Sbjct: 187 -------------------ERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVT 227
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ VL+ C LA +G+ I+ +V E
Sbjct: 228 LVSVLTACGRLADLELGEWINRYV-----------------------------------E 252
Query: 335 EKNIVSWNALITS----YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
EK + LITS YA+ G D A +F Q M+R +V++WSA+I ++
Sbjct: 253 EKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQ--------MDRRDVVAWSAMISGYSQA 304
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
R EALDLF +MQ A + N +T+ +LS CA AL G+ +H + + M + +
Sbjct: 305 SRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLG 364
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
L++ Y KCG +E VF ++ K++++W +I G NG G+ AL F M+E +
Sbjct: 365 TALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVE 424
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
P+ V F+ VLSACSHAGLV+EGR +F M R+F IEP++EHY CMVD+LGRAGL++EA
Sbjct: 425 PNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQ 484
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
+KNMP++PNA +W TLL SC++HKN ++ E Q+ L +G Y+LLSNIYA+ GR
Sbjct: 485 FIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGR 544
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
WEDA KVR K KG+KK G S IE+ IH F + +++ S + + +E++ Q+++
Sbjct: 545 WEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKS 604
Query: 691 KGCVPDN 697
G VP+
Sbjct: 605 AGYVPNT 611
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 178/374 (47%), Gaps = 51/374 (13%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + L +Q+H ++ G + F+ ++ +YA G + AR VF+
Sbjct: 127 FPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEM- 185
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + WNS+ +G +E +KL+ +M +L + D T V+ AC +
Sbjct: 186 --SERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLE- 242
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ ++ +V + G +GN ++ L+ MYAK GQ+ + +LFD++ ++ ++W+ M S
Sbjct: 243 ---LGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMIS 299
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
G++ C AL+LF M+ ++PN +T S+LSS
Sbjct: 300 GYSQASRCREALDLFHEMQKANIDPNEITMVSILSS------------------------ 335
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
CA L A GK +H F+ K + V + AL+ Y K G V+ + +F
Sbjct: 336 -----------CAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVF 384
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFS-QLEKLDGGSMERPNVISWSAVIGAFAS 389
++ KN++SW LI A G +A+E F LEK ++E PN +++ V+ A +
Sbjct: 385 GKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEK----NVE-PNDVTFIGVLSACSH 439
Query: 390 NGRGEEALDLFRKM 403
G +E DLF M
Sbjct: 440 AGLVDEGRDLFVSM 453
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 220/674 (32%), Positives = 354/674 (52%), Gaps = 67/674 (9%)
Query: 46 QLKQVHNQLIVTG--ANASAF-LAARVLSIYA---------RFGRLFDARNVFETAPFDC 93
+L Q+H L+ G ++ S F LA+R++ A R A P D
Sbjct: 23 RLLQLHAHLLTAGLMSSRSPFPLASRLVEALAHSDDPRHSPRPLLHALALLASLPTPPDS 82
Query: 94 KSSSLLWNSILR---VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
S +N+ LR + GL L LY + + D TFP +++AC +
Sbjct: 83 ASP---YNAALRALSLCTDRGLVTRCLPLYCSLLR-SARPDHLTFPFLLKACARLQER-- 136
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
++G V +VL +GF +V +VN + A M+++ KLFD V++
Sbjct: 137 --NYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRD--------- 185
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
V+W +L+ + R G E +++F M G
Sbjct: 186 --------------------------LVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVT 219
Query: 271 GAEAIAV-VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
E + V+S A L +G+ +HG+V G V + N ++ +Y K GD++ A+++
Sbjct: 220 PDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSV 279
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
F I++K IVSW +I YA+ GL D+A +VF ++ + D V W+A++ +
Sbjct: 280 FEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERD--------VFPWNALMTGYVQ 331
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
RG+EAL LF MQ A V + +T+ LLS C++ AL +G +H ++ R ++ ++++
Sbjct: 332 CKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVML 391
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
L++MY KCG +E+ VF++I +K+ +TW +MISG +G + A+ F+ MIE G
Sbjct: 392 GTNLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGL 451
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
+PD + F+ VLSAC HAGLV EG+ F +MV ++ +E +M+HY+CMVDLLGRAG L EA
Sbjct: 452 QPDEITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAE 511
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASG 629
+V MPMEP+A VWG L +CRMH N + E A ++ L +G Y+LL+N+YA +
Sbjct: 512 HLVNTMPMEPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEAN 571
Query: 630 RWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
+ A KVR+ + G++KV G S IE+ +H F + +D+ + + L E+ LQ+E
Sbjct: 572 MRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHTDIAAIYDCLHEITLQIE 631
Query: 690 NKGCVPDNDIILWE 703
+ + D ++L E
Sbjct: 632 HTANMIDTSMLLAE 645
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 211/480 (43%), Gaps = 59/480 (12%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F LL+ C + + V ++ G +A F+ + A + +AR +F+ +
Sbjct: 123 FPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSH 182
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM-GSFR 149
+ WN+++ V G+ AL+++ +M +GDG P + + GS +
Sbjct: 183 V---RDLVSWNTLIGGYVRRGVPREALEMFWRM-----VGDGAVTPDEVTMIGVVSGSAQ 234
Query: 150 FR-FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
R G+ +H +V G + V ++N ++ MY K G + + +F+ + K +SW M
Sbjct: 235 LRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTM 294
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
G+A D A ++F M E + W +L++ + +C R +E + LF M++ +
Sbjct: 295 IVGYAQFGLMDDARKVFDEMP----ERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMV 350
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
E + +LS C+ L A MG +H ++ + V + L+ +Y K G+++ A
Sbjct: 351 EPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIR 410
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+F EI EKN ++W A+I+ A G D A++ F ++ +L +P+ I++ V+ A
Sbjct: 411 VFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELG----LQPDEITFIGVLSACC 466
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
G +E + F M V + + + +
Sbjct: 467 HAGLVKEGQEFFSLM----------------------------------VSKYHLERKMK 492
Query: 449 VQNGLLNMYMKCGCLEEG-HLVFEQIEKKDLITWNSMISGYGMNG---LGENALATFEEM 504
+ ++++ + G L+E HLV + D + W ++ M+G LGE A E+
Sbjct: 493 HYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALFFACRMHGNITLGEKAAMKLVEL 552
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 209/627 (33%), Positives = 330/627 (52%), Gaps = 57/627 (9%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS +AR GR DAR +F P + S +N+++ + +AL M
Sbjct: 832 LLSAHARLGRPADARALFHAIPDPDQCS---YNAVIAALAQHSRGADALLFLAAMHADDF 888
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ + ++F + AC R G VH V + +V+I + L+ MYAK
Sbjct: 889 VLNAYSFASALSACAAEKDSRT----GVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPE 944
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
++ ++F+ + E N V+W SL++ +
Sbjct: 945 EARRVFEAMP-----------------------------------ERNIVSWNSLITCYE 969
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG-FEDYV 307
+ G + E + LF M K G +A V+S CA LAAD G+ +H V+K F + +
Sbjct: 970 QNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDM 1029
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
+ NAL+ +Y K G + A+ +F + +++VS +LIT YA + ++A VFSQ
Sbjct: 1030 VLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQ---- 1085
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
M NVI+W+ +I A+A NG EEAL LF +++ V T +L+ C A
Sbjct: 1086 ----MVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVAD 1141
Query: 428 LNIGREIHGHVVR------VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
L +G++ H HV++ ++ V N L++MY+K G +++G VFE++ +D ++W
Sbjct: 1142 LQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSW 1201
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
N+MI G+ NG ++AL FE M+ + PD V + VLSAC H+GLV EGRR F M
Sbjct: 1202 NAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTE 1261
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
+ I P +HY CM+DLLGRAG L+E +++K M MEP+A +W +LL SCR+HKN ++ E
Sbjct: 1262 DHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGE 1321
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI 661
A ++F L +G Y+LLSN+YA G+W D +VR S K +G+ K G SWIE+ RK+
Sbjct: 1322 WAAGKLFELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWIEIGRKV 1381
Query: 662 HMFSSGNSLQSDLKNVCEVLEELALQM 688
+F + ++ + +L + +QM
Sbjct: 1382 SVFLARDNGHPCKNEIHAILRIIQMQM 1408
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 171/604 (28%), Positives = 279/604 (46%), Gaps = 66/604 (10%)
Query: 16 NPSRPFSIITYNNSL------------LDCFDHLLQQCKTIHQLKQVHNQLIVTGANASA 63
+PS S+ + NSL L C L C +Q+H + ++
Sbjct: 131 HPSEALSLFSNMNSLGIRPKDATMASVLSCCAECLDLCGA----RQLHGHIAKRDFQSNV 186
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM 123
L ++ +Y L DAR F+ + +++ WN I+R G+ + A+ ++ +M
Sbjct: 187 ILGTALVDVYGNCFLLADARRAFDDI---LEPNAISWNVIVRRYHLAGMGDMAVDMFFRM 243
Query: 124 RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
GV G+T + AC+ + G+ +H VL+ G++ +VH+ + ++ MYAK
Sbjct: 244 LSAGVRPLGYTVSHAVLACRDNNALEE----GRCIHAFVLRHGYEHHVHVRSSVVDMYAK 299
Query: 184 MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
G M + LF+ +K+ + + SG A A +F+ M+ E N V+W ++
Sbjct: 300 CGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMK----ERNLVSWNAM 355
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
L+ + R L + LF MR+ E A + VLS C + G+ +H F IK GF
Sbjct: 356 LTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGF 415
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
+KNAL+ +Y K G ++ A+ L +F
Sbjct: 416 FSSPILKNALVRMYSKCGCLRSAERLL-----------------------------LFEM 446
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
+ D SW+++I + + E AL KMQ ++V N T S L+ CA
Sbjct: 447 GSERDS--------YSWNSLISGYERHSMSEAALYALTKMQ-SEVTPNQSTFSSALAACA 497
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
L G +IH +++R + ++++ L++MY KC + +FE +D+I WNS
Sbjct: 498 NIFLLKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNS 557
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
MI G +G GE L F+EM + G K D V F+ L +C G V GR F +M+ E
Sbjct: 558 MIFGCAYSGKGEYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMDE- 616
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
I P++EHY CM++LLG+ G + E D V++MP EP +W + + CR + N + E
Sbjct: 617 SIIPRIEHYECMIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERA 676
Query: 604 ASQI 607
A I
Sbjct: 677 AKCI 680
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 137/531 (25%), Positives = 248/531 (46%), Gaps = 57/531 (10%)
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM 123
FL R + A G + DAR +F+ P S WN+I+ + G AL L+ M
Sbjct: 86 FLFNRAIESLAACGSVADARELFDLMPLRDGGS---WNAIITASSRAGHPSEALSLFSNM 142
Query: 124 RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
LG+ T V+ C + +H H+ + FQ NV + L+ +Y
Sbjct: 143 NSLGIRPKDATMASVLSCCAEC----LDLCGARQLHGHIAKRDFQSNVILGTALVDVYGN 198
Query: 184 MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
++D+ + FD + N ISWN++ + L D A+++F RM G+ P T
Sbjct: 199 CFLLADARRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYT---- 254
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
SHA VL+ C D A G+ IH FV++ G+
Sbjct: 255 -VSHA-----------------------------VLA-CRDNNALEEGRCIHAFVLRHGY 283
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
E +V V+++++ +Y K G + AQ+LF+ K++V ++++ A G +A VF
Sbjct: 284 EHHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFE- 342
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
M+ N++SW+A++ + + AL LF++M+ +++T+ +LS C
Sbjct: 343 -------GMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACT 395
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH--LVFEQIEKKDLITW 481
+ G E+H ++ + +++N L+ MY KCGCL L+FE ++D +W
Sbjct: 396 GILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSW 455
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
NS+ISGY + + E AL +M ++ P+ F + L+AC++ L+ +G +I M+R
Sbjct: 456 NSLISGYERHSMSEAALYALTKM-QSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIR 514
Query: 542 E-FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
+ + I+ + + ++D+ + + I + P + +W +++ C
Sbjct: 515 KGYEIDDILR--SVLIDMYCKCRQFDYSIRIFEARPSR-DVILWNSMIFGC 562
Score = 152 bits (385), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 170/348 (48%), Gaps = 12/348 (3%)
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
+K F F+ N L+ Y + G + A+ +F EI N S+NAL++++A G +A
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
+F + P+ S++AVI A A + RG +AL M V N+ + +
Sbjct: 847 ALFHAIPD--------PDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASA 898
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
LS CA G ++H V + K++ + + LL+MY KC EE VFE + ++++
Sbjct: 899 LSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNI 958
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
++WNS+I+ Y NG AL F M++AGF PD V +V+SAC+ EGR++
Sbjct: 959 VSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHAR 1018
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
+V+ R M +VD+ + G + A + M + +L+ N +
Sbjct: 1019 VVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASR-SVVSETSLITGYARSANVE 1077
Query: 599 VAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
A+ + SQ ++ + ++ +L YA +G E+A ++ + K + +
Sbjct: 1078 DAQMVFSQ---MVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESV 1122
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 183/362 (50%), Gaps = 22/362 (6%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
QVH + + ++ + +L +YA+ +AR VFE P + + + WNS++
Sbjct: 913 QVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMP---ERNIVSWNSLITCYE 969
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG-F 167
NG AL L+V M K G + D T V+ AC + + R G+ VH V++ F
Sbjct: 970 QNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADR----EGRQVHARVVKSDRF 1025
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ ++ + N L+ MYAK G+ + +FD++ ++ +S + +G+A + + + A +F +
Sbjct: 1026 REDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQ 1085
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M +E N + W L++++A+ G EE + LF +++ + VL+ C ++A
Sbjct: 1086 M----VEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVAD 1141
Query: 288 DHMGKVIHGFVIKGGF------EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
+G+ H V+K GF E VFV N+L+ +Y K G + +F + ++ VSW
Sbjct: 1142 LQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSW 1201
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
NA+I +A+ G +A+ +F ++ S E P+ ++ V+ A +G EE FR
Sbjct: 1202 NAMIVGHAQNGRAKDALHLFERML----CSKESPDSVTMIGVLSACGHSGLVEEGRRYFR 1257
Query: 402 KM 403
M
Sbjct: 1258 SM 1259
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 202/463 (43%), Gaps = 81/463 (17%)
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
L+ F ++N L+ YA++G++ D+ ++FD++ N S+N + S A A
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC 282
LF + +P+ ++ +++++ A+ R + + M + A + A LS C
Sbjct: 847 ALFHAIP----DPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSAC 902
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
A G +H V K V++ +AL+ +Y K + A+ +F + E+NIVSWN
Sbjct: 903 AAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWN 962
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
+LIT Y + G E AL LF
Sbjct: 963 SLITCYEQNGPVGE---------------------------------------ALVLFVS 983
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS-MNKNILVQNGLLNMYMKCG 461
M A V + VT++ ++S CA AA GR++H VV+ +++++ N L++MY KCG
Sbjct: 984 MMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCG 1043
Query: 462 ------C-------------------------LEEGHLVFEQIEKKDLITWNSMISGYGM 490
C +E+ +VF Q+ +K++I WN +I+ Y
Sbjct: 1044 RTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQ 1103
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIE--P 547
NG E AL F + P + VL+AC + + G++ +++E FR + P
Sbjct: 1104 NGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGP 1163
Query: 548 QMEHYA--CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ + + +VD+ + G + + + + + M N W ++
Sbjct: 1164 ESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNV-SWNAMI 1205
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 191/440 (43%), Gaps = 81/440 (18%)
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
A ELF M L + +W +++++ +R G E + LF M GI +A VLS
Sbjct: 104 ARELFDLMPLR----DGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLS 159
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
CA+ + +HG + K F+ V + AL+ VYG + A+ F +I E
Sbjct: 160 CCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILE----- 214
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
PN ISW+ ++ + G G+ A+D+F
Sbjct: 215 ----------------------------------PNAISWNVIVRRYHLAGMGDMAVDMF 240
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
+M A V T+S + C ++ AL GR IH V+R ++ V++ +++MY KC
Sbjct: 241 FRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKC 300
Query: 461 GCLE-------------------------------EGHLVFEQIEKKDLITWNSMISGYG 489
G ++ + VFE +++++L++WN+M++GY
Sbjct: 301 GAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYI 360
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR-EFRIEPQ 548
+ AL F++M + + D + +VLSAC+ + +G + ++ F P
Sbjct: 361 RSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPI 420
Query: 549 MEHYACMVDLLGRAGLLQEASDIVK-NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
+++ +V + + G L+ A ++ M E ++Y W +L++ H ++EA +
Sbjct: 421 LKN--ALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHS---MSEAALYAL 475
Query: 608 FGLITETTGSYMLLSNIYAA 627
+ +E T + S+ AA
Sbjct: 476 TKMQSEVTPNQSTFSSALAA 495
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 189/419 (45%), Gaps = 42/419 (10%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
+N+L+D + +C + V +++ A+ S +++ YAR + DA+ VF
Sbjct: 1032 SNALVDMY----AKCGRTRAARCVFDRM----ASRSVVSETSLITGYARSANVEDAQMVF 1083
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+ + + WN ++ NG E AL+L+V++++ V +T+ V+ AC +
Sbjct: 1084 SQM---VEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVA 1140
Query: 147 SFRFRFSFGQIVHNHVLQMGF------QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
+ GQ H HVL+ GF + +V + N L+ MY K G + D K+F+++ +
Sbjct: 1141 DLQL----GQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR 1196
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
+ +SWN M G A N AL LF+RM P+ VT +LS+ G +EE F
Sbjct: 1197 DNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYF 1256
Query: 261 -DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
M GI + ++ + A H+ K + + + E + +L+
Sbjct: 1257 RSMTEDHGIIPSQDHYTCMIDLLGR--AGHL-KEVEELIKEMSMEPDAVLWASLLGSCRL 1313
Query: 320 HGDVKV----AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
H +V++ A LF E++ +N + L YAE G + V S ++ G ++P
Sbjct: 1314 HKNVEMGEWAAGKLF-ELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHR--GVSKQP 1370
Query: 376 NVISWSAV---IGAFASNGRGE----EALDLFR--KMQLAKVVANSVTISGLLSVCAES 425
SW + + F + G E + R +MQ+++V +S G+++ E+
Sbjct: 1371 GC-SWIEIGRKVSVFLARDNGHPCKNEIHAILRIIQMQMSRVSVDSENADGMMNYSTEA 1428
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 218/728 (29%), Positives = 368/728 (50%), Gaps = 114/728 (15%)
Query: 37 LLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+LQ C K++ K+V N + G + L +++ +Y G L +A VF+ +
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIE- 158
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+L WN ++ +G + ++ L+ KM GV D +TF V ++ + S +
Sbjct: 159 --KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV----N 212
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H ++L+ GF + N L+ Y K ++ + K+FD++ ++ ISWN + +G+
Sbjct: 213 GGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTS------------------------------- 242
N + L +F +M G+E + T S
Sbjct: 273 SNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDR 332
Query: 243 ----LLSSHARCGRLE-------------------------------ETMDLFDMMRKRG 267
LL +++CG L+ E + LF+ M + G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
I + VL+ CA GK +H ++ + +FV NAL+ +Y K G ++ A+
Sbjct: 393 ISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAE 452
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+FSE+ K+I+SWN +I Y++ +EA+ +F+ L V F
Sbjct: 453 LVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLL-----------------LVEKRF 495
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
+ + R T++ +L CA +A + GREIHG+++R +
Sbjct: 496 SPDER---------------------TVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
V N L++MY KCG L L+F+ I KDL++W MI+GYGM+G G+ A+A F +M +A
Sbjct: 535 HVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
G +PD ++FV++L ACSH+GLV+EG R F++M E +IEP +EHYAC+VD+L R G L +
Sbjct: 595 GIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGNLSK 654
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A ++NMP+ P+A +WG LL CR+H + +AE +A ++F L E TG Y+L++NIYA
Sbjct: 655 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPENTGYYVLMANIYAE 714
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
+ +WE+ ++R +GL+K G SWIE+K ++++F +G+S + + + L + +
Sbjct: 715 AEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETEKIEAFLRGVRAR 774
Query: 688 MENKGCVP 695
M +G P
Sbjct: 775 MIEEGYSP 782
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 180/398 (45%), Gaps = 66/398 (16%)
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
++ + VL +CAD + GK + F+ GF + + L +Y GD+K A
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASR 150
Query: 329 LFSEIEEKNIVSWNALITSYAEAG-----------LCDEAVEV-----------FSQLEK 366
+F +++ + + WN L+ A++G + VE+ FS L
Sbjct: 151 VFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 367 LDGG----------------------------------------SMERPNVISWSAVIGA 386
++GG M +VISW+++I
Sbjct: 211 VNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIING 270
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
+ SNG E+ L +F +M + + + TI + + CA+S +++GR +H V+ ++
Sbjct: 271 YVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSRE 330
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
N LL+MY KCG L+ +VF ++ + ++++ SMI+GY GL A+ FEEM E
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
G PD AVL+ C+ L++EG+R+ + ++E + + ++D+ + G ++
Sbjct: 391 EGISPDVYTVTAVLNCCARNRLLDEGKRVHE-WIKENDMGFDIFVSNALMDMYAKCGSMR 449
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
EA + M ++ + W T++ KN EA++
Sbjct: 450 EAELVFSEMRVK-DIISWNTVIGG--YSKNCYANEALS 484
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 195/450 (43%), Gaps = 78/450 (17%)
Query: 22 SIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFD 81
S + ++ C ++++ +Q+H ++ +G + +++ Y + R+
Sbjct: 189 SGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDS 248
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
AR VF+ + + WNSI+ VSNGL E L ++V+M G+ D T V
Sbjct: 249 ARKVFDEMT---ERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAG 305
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C R S G+ VH ++ F N L+ MY+K G + + +F ++ ++
Sbjct: 306 C---ADSRL-ISLGRAVHCFGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRS 361
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS--------------- 246
+S+ M +G+A A++LF+ ME EG+ P+ T T++L+
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHE 421
Query: 247 --------------------HARCGRLEETMDLFDMMRKRGI------------------ 268
+A+CG + E +F MR + I
Sbjct: 422 WIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANE 481
Query: 269 --------------EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
+A VL CA L+A G+ IHG++++ G+ V N+L+
Sbjct: 482 ALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
+Y K G + +A+ LF +I K++VSW +I Y G EA+ +F+Q+ + +E
Sbjct: 542 DMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ---AGIE- 597
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
P+ IS+ +++ A + +G +E F M+
Sbjct: 598 PDEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 195/431 (45%), Gaps = 42/431 (9%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
+ + + K+VH + F++ ++ +YA+ G + +A VF + WN
Sbjct: 411 RLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMRV---KDIISWN 467
Query: 102 SILRVNVSNGLYENALKLY-VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
+++ N AL L+ + + + D T V+ AC + +F G+ +H
Sbjct: 468 TVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAF----DKGREIHG 523
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
++++ G+ + H+ N L+ MYAK G + + LFD + K+ +SW +M +G+ ++
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKE 583
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVL 279
A+ LF +M G+EP+ +++ SLL + + G ++E F++MR IE E A ++
Sbjct: 584 AIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 643
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS---EIEEK 336
+ A ++ K + F+ + AL+C H DVK+A+ + E+E +
Sbjct: 644 DMLARTG--NLSKA-YRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFELEPE 700
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV-ISWSAVIG------AFAS 389
N + + YAEA E E +L K G R N SW + G A S
Sbjct: 701 NTGYYVLMANIYAEA----EKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDS 756
Query: 390 NGRGEEALDLFRKMQLAKVVA---NSVTISGLL---------SVCAESA----ALNIGRE 433
+ E ++ F + A+++ + +T L+ ++C S AL I
Sbjct: 757 SNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISS 816
Query: 434 IHGHVVRVSMN 444
HG ++RV+ N
Sbjct: 817 GHGKIIRVTKN 827
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 199/584 (34%), Positives = 320/584 (54%), Gaps = 58/584 (9%)
Query: 176 ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
+L+ YA G + + ++FD + KN WN M S +A D ++ LFK M +G+E
Sbjct: 1 KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 60
Query: 236 ----------------NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
+ ++W S++S + G E + ++ M GI+V I VL
Sbjct: 61 KRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 120
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
CA +GK +H IK FE + N L+ +Y K GD+ A +F ++ E+N+V
Sbjct: 121 VGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 180
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEK----LD-------------GGSMER-------- 374
SW ++I Y G D A+ + Q+EK LD GS++
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240
Query: 375 ------PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA----------NSVTISGL 418
N+ +A++ +A G E A +F M + +++ +S T++ +
Sbjct: 241 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACI 300
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
L CA +AL G+EIHG+++R + + V N L+++Y+KCG L L+F+ I KDL
Sbjct: 301 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDL 360
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
++W MI+GYGM+G G A+ATF EM +AG +PD V+F+++L ACSH+GL+ +G R F +
Sbjct: 361 VSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYI 420
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
M +F IEP++EHYACMVDLL R G L +A ++ +P+ P+A +WG LL CR++ + +
Sbjct: 421 MKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIE 480
Query: 599 VAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
+AE +A ++F L E TG Y+LL+NIYA + +WE+ ++R KGL+K G SWIE+K
Sbjct: 481 LAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIK 540
Query: 659 RKIHMFSSG-NSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
++++F SG NS K + +L+++ +M+ +G P L
Sbjct: 541 GRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYAL 584
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 173/357 (48%), Gaps = 53/357 (14%)
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
C + WNS++ VSNGL E L +Y +M LG+ D T V+ C G+
Sbjct: 74 CDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTL---- 129
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
S G+ VH+ ++ F+ ++ N L+ MY+K G + + ++F+K+ +N +SW M +G+
Sbjct: 130 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 189
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD-------------- 258
+ DGA+ L ++ME EG++ + V TS+L + AR G L+ D
Sbjct: 190 TRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNL 249
Query: 259 -----LFDMMRKRGIEVGAEAI--------------------------AVVLSVCADLAA 287
L DM K G GA ++ A +L CA L+A
Sbjct: 250 FVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSA 309
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
GK IHG++++ G+ V NAL+ +Y K G + +A+ LF I K++VSW +I
Sbjct: 310 LERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAG 369
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
Y G +EA+ F+++ D G P+ +S+ +++ A + +G E+ F M+
Sbjct: 370 YGMHGYGNEAIATFNEMR--DAGI--EPDEVSFISILYACSHSGLLEQGWRFFYIMK 422
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 158/358 (44%), Gaps = 46/358 (12%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
H + ++ K VH+ + ++ F+ ++ +YA+ G + A +VF T
Sbjct: 222 HACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVV---K 278
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ WN+++ LK D T ++ AC + + G
Sbjct: 279 DIISWNTMV----------GELK-----------PDSRTMACILPACASLSALER----G 313
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ +H ++L+ G+ + H+ N L+ +Y K G + + LFD + K+ +SW +M +G+ ++
Sbjct: 314 KEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMH 373
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEA 274
+ A+ F M G+EP+ V++ S+L + + G LE+ F +M+ IE E
Sbjct: 374 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEH 433
Query: 275 IAV---VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV----KVAQ 327
A +LS +L+ + K I I + AL+C + D+ KVA+
Sbjct: 434 YACMVDLLSRTGNLSKAY--KFIETLPIAPD----ATIWGALLCGCRIYHDIELAEKVAE 487
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
+F E+E +N + L YAEA ++ EV EK+ + + SW + G
Sbjct: 488 RVF-ELEPENTGYYVLLANIYAEA---EKWEEVKRMREKIGKKGLRKNPGCSWIEIKG 541
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/494 (36%), Positives = 287/494 (58%), Gaps = 24/494 (4%)
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
P+ +WT+++ E+ ++ + +MR+RG+E+ VL + G+++
Sbjct: 89 PDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIV 148
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
HG ++K GF VF +NALI +Y K G + A LF E+ N+V+WN +IT G
Sbjct: 149 HGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDT 208
Query: 355 DEAVEVFSQLEKLDGGS-----------------------MERPNVISWSAVIGAFASNG 391
+ A +F ++ + + GS M +V+SW ++I A+ NG
Sbjct: 209 ERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNG 268
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
R EAL+LF++M LA V A+S+ I+ +LS CA+ AL++GR IH ++ R + ++ +
Sbjct: 269 RAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDT 328
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++MY KCGC++ VF + +K+L +WN+M+SG ++G G AL F++M G P
Sbjct: 329 ALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGP 388
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
+ + FVAVLSACSH G V EG + F+ M +EF I P++EHY CMVD+L R GL+ EA ++
Sbjct: 389 NDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEM 448
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
++ MP+EPN +WG LLN+C++H T+V E + I L++E G Y+LLSNI+AA +W
Sbjct: 449 IRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQW 508
Query: 632 EDAAKVRISAKTKGL-KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
+ K R K G+ KK+ G S IE+ +H F + + L S + V V+E L +E
Sbjct: 509 NEVEKTRKMMKQMGVEKKIPGYSSIELDSVVHDFFAEDRLHSKWREVSTVIERLNTHLEV 568
Query: 691 KGCVPDNDIILWEM 704
KG + ++L+ +
Sbjct: 569 KGYEANPSLVLYNI 582
Score = 182 bits (463), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 220/467 (47%), Gaps = 43/467 (9%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFD-ARNVFETAPFDCKSS 96
LQ CK+ LK++H QLI+TG F+A + + YA R D A VF +
Sbjct: 34 LQSCKSTEDLKKIHAQLIITGQIKDTFIATKTVESYAVSARNIDYAFWVFVGINY---PD 90
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
S W +++R V E AL+ Y MR+ GV + FTF V++A R + G+
Sbjct: 91 SYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAY----GLRPSYQEGR 146
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
IVH ++++GF +V N LI MY K G ++D+ LFD++ N ++WN M +G
Sbjct: 147 IVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCG 206
Query: 217 DCDGALELFKRMELEGL---------------------------EPNFVTWTSLLSSHAR 249
D + A LF M + E + V+W S++S++ +
Sbjct: 207 DTERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQ 266
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFV 309
GR E ++LF M G+ + I +LS CA + A MG+ IH ++ + + VF+
Sbjct: 267 NGRAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFL 326
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
AL+ +Y K G + A +F+ + KN+ SWNA+++ A G A+E+F Q+E
Sbjct: 327 DTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGV 386
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG-LLSVCAESAAL 428
G PN I++ AV+ A + G EE F +M + V G ++ + +
Sbjct: 387 G----PNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLI 442
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
N +E+ + + + N+++ LLN G G V I+K
Sbjct: 443 NEAKEM---IRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQK 486
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/463 (39%), Positives = 280/463 (60%), Gaps = 12/463 (2%)
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL--AADHMGKV 293
N V+WTS ++ R GRL E F MR G+E +LS C D ++ +G +
Sbjct: 35 NTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPSGSEALGDL 94
Query: 294 IHGFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+HG+ K G + ++V V A+I +Y K G VK A+ +F +E+KN V+WN +I Y +G
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTMIDGYMRSG 154
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
D A ++F ++ + D +ISW+A+I F + G EEAL FR+MQ++ V +
Sbjct: 155 QVDNAAKMFDKMPERD--------LISWTAMINGFVNKGFHEEALAWFREMQISGVKPDY 206
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
V I L+ C AL+ G +H +V+ N+ V N L+++Y +CGC+E VF++
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDK 266
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+EK+ +++WNS+I G+ NG +L F +M E FKPD V F L+ACSH GLV EG
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEG 326
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
R F +M+ ++RI P++EHY C+VDL RAG L++A +V++MPM+PN V G+LL +CR
Sbjct: 327 LRYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACR 386
Query: 593 MH-KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
H NT +AE + + L ++ +Y++LSN+YAA G+WE A+K+R K GLKK G
Sbjct: 387 NHGNNTVLAEKLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPG 446
Query: 652 QSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
S IE+ H+F +G+S + N+CEVL+ ++ + +GCV
Sbjct: 447 FSSIEIDDCTHVFMAGDSAHVETTNICEVLKLISSNLRLQGCV 489
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 162/310 (52%), Gaps = 13/310 (4%)
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF-RFSF 154
+++ W S + + NG A K + MR GV + TF ++ C G F +
Sbjct: 35 NTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGC---GDFPSGSEAL 91
Query: 155 GQIVHNHVLQMGFQGN-VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G ++H + ++G N V + +IGMY+K G++ + +FD + KN ++WN M G+
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTMIDGYM 151
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ D A ++F +M E + ++WT++++ G EE + F M+ G++
Sbjct: 152 RSGQVDNAAKMFDKMP----ERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYV 207
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
AI L+ C +L A G +H +V+ F++ V V N+LI +Y + G V+ A+ +F ++
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKM 267
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
E++ +VSWN++I +A G E++ F ++++ +P+ ++++ + A + G
Sbjct: 268 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQE----ERFKPDAVTFTGALTACSHVGLV 323
Query: 394 EEALDLFRKM 403
EE L F+ M
Sbjct: 324 EEGLRYFQIM 333
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 103/191 (53%), Gaps = 7/191 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y R G++ +A +F+ P + + W +++ V+ G +E AL + +M+ GV D
Sbjct: 150 YMRSGQVDNAAKMFDKMP---ERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDY 206
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
+ AC +G+ SFG VH +V+ F+ NV + N LI +Y + G + + +
Sbjct: 207 VAIIAALNACTNLGAL----SFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 262
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+FDK+ + +SWN + GFA N + +L F++M+ E +P+ VT+T L++ + G
Sbjct: 263 VFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGL 322
Query: 253 LEETMDLFDMM 263
+EE + F +M
Sbjct: 323 VEEGLRYFQIM 333
>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 216/636 (33%), Positives = 341/636 (53%), Gaps = 56/636 (8%)
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK---- 125
++ + R G L +A ++F P +++ W ++L NG A K++ KM +
Sbjct: 38 ITKHGRNGDLKEAESIFSRMP---HKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTA 94
Query: 126 -LGVLGDGFTF--PLVI-RACKFMGSFRFR--FSFGQIVHNHVLQMGFQGNVHIV----- 174
+ +T P++I A K R R S+ ++ + + G N +
Sbjct: 95 SYNAMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITG-LARAGMVDNAEELYLETP 153
Query: 175 ---------NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
N LI Y K+G++ ++ ++F+ + ++ ISW+ M G+ A ELF
Sbjct: 154 VEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELF 213
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG-IEVGAEAIAVVLSVCAD 284
+RM E N VTWT+++ H + G E LF MRK G ++V + V+ C++
Sbjct: 214 ERMP----ERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSE 269
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
G +HG V + GFE VF+ NA+I +Y + V A+ +F + K++VSWNAL
Sbjct: 270 FGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNAL 329
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLD-----------------GGSME------RPNVISWS 381
I Y + +E +F + ++ D G S+E + + I+W+
Sbjct: 330 IAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWT 389
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
AVI F NG EEA+ F +M V N +T+S +LS A A LN G +IH VV++
Sbjct: 390 AVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKM 449
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
M ++ +QN L++MY KCG + +GH +F I +++++NSMI+G+ NG GE AL F
Sbjct: 450 GMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELF 509
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
+M+ G KP+ + F+ VLSAC+H GL+ +G F M ++IEP HYAC+VDLLGR
Sbjct: 510 HKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLLGR 569
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLL 621
AG L +A D++++MP EP++ VWG LL + R+H DVA+ A QIF L + Y +L
Sbjct: 570 AGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYAVL 629
Query: 622 SNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
S +Y+++GR D+ +VR++ KG+KK AG SWI V
Sbjct: 630 SFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWIIV 665
Score = 39.3 bits (90), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL-WN 101
T++Q Q+H ++ G + ++S+Y + G + D +F + S +++ +N
Sbjct: 435 TLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTS----INSPNIVSFN 490
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
S++ NG E AL+L+ KM G + TF V+ AC +G
Sbjct: 491 SMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVG 535
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 205/665 (30%), Positives = 351/665 (52%), Gaps = 53/665 (7%)
Query: 45 HQLKQVHNQLIVTGANASAFLAAR-VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
H +K +H Q+I + AA+ ++S Y FG + A VF + L WNS
Sbjct: 437 HGIKMMHAQMIKLPQKWNPDAAAKNLISSYLGFGDFWSAAMVFYVG---LPRNYLKWNSF 493
Query: 104 LR-VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
+ S G L+++ ++ GV+ D + + ++ C + G +H +
Sbjct: 494 VEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRV----MDIWLGMEIHGCL 549
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG-- 220
++ GF +V++ L+ Y + + + ++F ++ + WN LN +
Sbjct: 550 IKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWN---EAIILNLQSEKLQ 606
Query: 221 -ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
+ELF++M+ L+ T + V+
Sbjct: 607 KGVELFRKMQFSFLKAETAT----------------------------------IVRVLQ 632
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
+ ++L +MGK HG+V++ GF+ V+V +LI +Y K+ + AQ +F ++ +NI
Sbjct: 633 ASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIF 692
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
+WN+L++ Y+ G+ ++A+ + +Q+EK +G +P++++W+ +I +A G G+EAL
Sbjct: 693 AWNSLVSGYSFKGMFEDALRLLNQMEK-EGI---KPDLVTWNGMISGYAMWGCGKEALAF 748
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
F +MQ V+ NS +I+ LL CA + L G+EIH +R +++ V L++MY K
Sbjct: 749 FAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSK 808
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
L+ H VF +I+ K L +WN MI G+ + GLG+ A++ F EM + G PD + F A+
Sbjct: 809 SSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTAL 868
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
LSAC ++GL+ EG + FD M+ ++RI P++EHY CMVDLLGRAG L EA D++ MP++P
Sbjct: 869 LSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKP 928
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRI 639
+A +WG LL SCR+HKN AE A +F L + +Y+L+ N+Y+ RWED +R
Sbjct: 929 DATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRE 988
Query: 640 SAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDI 699
G++ SWI++ +++H+FSS D + L +L +M+ G VPD +
Sbjct: 989 LMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNC 1048
Query: 700 ILWEM 704
+ M
Sbjct: 1049 VYQNM 1053
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 27 NNSLLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
N++ + C LL+ C ++ L K++H I G F+A ++ +Y++ L +A
Sbjct: 760 NSASITC---LLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAH 816
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
VF +S WN ++ GL + A+ ++ +M+K+GV D TF ++ ACK
Sbjct: 817 KVFRRIQNKTLAS---WNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACK 873
Query: 144 FMG 146
G
Sbjct: 874 NSG 876
>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial [Vitis vinifera]
Length = 744
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 216/636 (33%), Positives = 341/636 (53%), Gaps = 56/636 (8%)
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK---- 125
++ + R G L +A ++F P +++ W ++L NG A K++ KM +
Sbjct: 117 ITKHGRNGDLKEAESIFSRMP---HKNAISWTAMLTAYYENGHIAKARKMFEKMPQRTTA 173
Query: 126 -LGVLGDGFTF--PLVI-RACKFMGSFRFR--FSFGQIVHNHVLQMGFQGNVHIV----- 174
+ +T P++I A K R R S+ ++ + + G N +
Sbjct: 174 SYNAMITAYTRSNPMMIGEASKLFAEMRERNSISYAAMITG-LARAGMVDNAEELYLETP 232
Query: 175 ---------NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
N LI Y K+G++ ++ ++F+ + ++ ISW+ M G+ A ELF
Sbjct: 233 VEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELF 292
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG-IEVGAEAIAVVLSVCAD 284
+RM E N VTWT+++ H + G E LF MRK G ++V + V+ C++
Sbjct: 293 ERMP----ERNVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVNPTTLTVMFEACSE 348
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
G +HG V + GFE VF+ NA+I +Y + V A+ +F + K++VSWNAL
Sbjct: 349 FGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARKIFDMMNRKDVVSWNAL 408
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLD-----------------GGSME------RPNVISWS 381
I Y + +E +F + ++ D G S+E + + I+W+
Sbjct: 409 IAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNKGKMGKSIELFRMMPKQDDIAWT 468
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
AVI F NG EEA+ F +M V N +T+S +LS A A LN G +IH VV++
Sbjct: 469 AVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKM 528
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
M ++ +QN L++MY KCG + +GH +F I +++++NSMI+G+ NG GE AL F
Sbjct: 529 GMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFGEEALELF 588
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
+M+ G KP+ + F+ VLSAC+H GL+ +G F M ++IEP HYAC+VDLLGR
Sbjct: 589 HKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYACIVDLLGR 648
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLL 621
AG L +A D++++MP EP++ VWG LL + R+H DVA+ A QIF L + Y +L
Sbjct: 649 AGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLRLDVAKLAAQQIFKLEPDNAAPYAVL 708
Query: 622 SNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
S +Y+++GR D+ +VR++ KG+KK AG SWI V
Sbjct: 709 SFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWIIV 744
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 201/636 (31%), Positives = 336/636 (52%), Gaps = 82/636 (12%)
Query: 62 SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYV 121
S AA ++ F + FD +V+ WNS++ G +L+ +
Sbjct: 24 STTAAATNTNLTTLFNKYFDRTDVYS------------WNSLIAELARGGDSCESLRAFS 71
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
MRKL + + TFP I++C S F + G+ H L GF+ ++ + + LI MY
Sbjct: 72 WMRKLDIKPNRSTFPCAIKSC----SALFDLNSGKQAHQQALVFGFESDLFVSSALIDMY 127
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
+K G++S++ LFD++ +N ++W + +G+ N D AL +FK E E
Sbjct: 128 SKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSE------- 180
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
G EE G V + A+ VLS C+ ++ + + +HG IK
Sbjct: 181 ---------GNGEEV----------GTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKV 221
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
G + + V+N L+ Y K G+V +++ +F +
Sbjct: 222 GLDKVMGVENTLLDAYAKCGEVSLSRKVFDD----------------------------- 252
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM-QLAKVVANSVTISGLLS 420
M +V+SW+++I +A NG +A ++F M + N VT+S LL
Sbjct: 253 ----------MAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLL 302
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
CA AL +G +H V+++ N+++ +++MY KCG E F+ +++K++ +
Sbjct: 303 ACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRS 362
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
W +MI+GYGM+G AL F +MI AG KP+ + F++VL+ACSHAG + EG R F+ M
Sbjct: 363 WTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMS 422
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
E+ +EP +EHY CMVDLLGRAG ++EA +++K+M + + +WG+LL +CR+HK+ ++A
Sbjct: 423 HEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELA 482
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
E A ++F L G Y+LL+NIYA +GRW+D ++RI K +GL K G S +E+K +
Sbjct: 483 EISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGR 542
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
+H+F G+ + + + LEEL+++++ G VP+
Sbjct: 543 VHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPN 578
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 181/394 (45%), Gaps = 62/394 (15%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLF 80
I N S C ++ C + L KQ H Q +V G + F+++ ++ +Y++ G+L
Sbjct: 78 IKPNRSTFPC---AIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLS 134
Query: 81 DARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM---------RKLGVLGD 131
+AR +F+ P + + + W S++ V N AL ++ + ++G D
Sbjct: 135 NARVLFDEIP---RRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVD 191
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
V+ AC + + + + VH +++G + + N L+ YAK G++S S
Sbjct: 192 SVAMISVLSACSRVSN----KAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSR 247
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARC 250
K+FD + K+ +SWN M + +A N A E+F M + G + N VT ++LL +
Sbjct: 248 KVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLA---- 303
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
CA A +G +H VIK G+ + V +
Sbjct: 304 -------------------------------CAHEGALRVGMCLHDQVIKMGYVNNVIMA 332
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
++I +Y K G ++A+N F ++EKN+ SW A+I Y G EA++VF Q+ + G
Sbjct: 333 TSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQM--IWAG 390
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+PN I++ +V+ A + G EE F M
Sbjct: 391 V--KPNYITFISVLAACSHAGFLEEGWRWFNAMS 422
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 139/302 (46%), Gaps = 47/302 (15%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH I G + + +L YA+ G + +R VF+ + + WNS++ V
Sbjct: 214 VHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMA---EKDVVSWNSMIAVYAQ 270
Query: 110 NGLYENALKLYVKMRKLGVLGDGF---TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
NGL +A +++ M K G G + T ++ AC G+ R G +H+ V++MG
Sbjct: 271 NGLSTDAFEVFHGMLKAG--GGKYNEVTLSTLLLACAHEGALRV----GMCLHDQVIKMG 324
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+ NV + +I MY K GQ + FD ++ KN SW M +G+ ++ AL++F
Sbjct: 325 YVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFY 384
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
+M G++PN++T+ S+L++ + G LEE F+ M
Sbjct: 385 QMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMS---------------------- 422
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE-EKNIVSWNALI 345
H + ++ G E Y ++ + G+ G +K A NL ++ ++ V W +L+
Sbjct: 423 --------HEYNVEPGVEHY----GCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLL 470
Query: 346 TS 347
+
Sbjct: 471 AA 472
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 204/672 (30%), Positives = 346/672 (51%), Gaps = 51/672 (7%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIY-ARFG-RLFDARNVFETAPF 91
F +L CKT Q KQ+H+Q I G + ++ + +R G + A +F P
Sbjct: 37 FISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIP- 95
Query: 92 DCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR 151
+ ++WN++++ ++LY+ M K GV D TFP ++ K G
Sbjct: 96 --EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGG---A 150
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
+ G+ +H HV++ G N+++ N L+ MY+ G M + +FD+ ++ SWN+M SG
Sbjct: 151 LACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISG 210
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+ RM+ EE+++L M + +
Sbjct: 211 -------------YNRMK----------------------EYEESIELLVEMERNLVSPT 235
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
+ + +VLS C+ + + K +H +V + E + ++NAL+ Y G++ +A +F
Sbjct: 236 SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR 295
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
++ ++++SW +++ Y E G A F Q+ D ISW+ +I + G
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDR--------ISWTIMIDGYLRAG 347
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
E+L++FR+MQ A ++ + T+ +L+ CA +L IG I ++ + + +++V N
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN 407
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++MY KCGC E+ VF ++++D TW +M+ G NG G+ A+ F +M + +P
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D + ++ VLSAC+H+G+V++ R+ F M + RIEP + HY CMVD+LGRAGL++EA +I
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
++ MPM PN+ VWG LL + R+H + +AE A +I L + Y LL NIYA RW
Sbjct: 528 LRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRW 587
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
+D +VR +KK G S IEV H F +G+ + + LEELA +
Sbjct: 588 KDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFA 647
Query: 692 GCVPDNDIILWE 703
+PD +L+E
Sbjct: 648 AYLPDTSELLFE 659
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 231/761 (30%), Positives = 382/761 (50%), Gaps = 73/761 (9%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L C I K Q+H ++ G ++ F+ ++++Y+R+G L A +F
Sbjct: 216 FSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMH 275
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS-FR 149
+ + +NS++ G + AL+L+ KM+ + D T ++ AC +G+ ++
Sbjct: 276 ---RRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYK 332
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+ +H++V++MG ++ I L+ +Y K + + + F +N + WN+M
Sbjct: 333 -----GKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVML 387
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+ + + +F +M++EGL PN T+ S+L + G L DL + + + I+
Sbjct: 388 VAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGAL----DLGEQIHTQVIK 443
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
G + V SV D+ A H +++ E+ V A+I Y +H A L
Sbjct: 444 SGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKL 503
Query: 330 FSEIEEKNIVS---------------------------------------WNALITSYAE 350
F E+E + I S NAL++ YA
Sbjct: 504 FQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYAR 563
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
G +A F +++ D ISW+A+I FA +G EEAL +F +M A V A
Sbjct: 564 CGRAQDAYLAFEKIDAKDN--------ISWNALISGFAQSGHCEEALQVFSQMNQAGVEA 615
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
N T +S A +A + G++IH +++ + N L+ +Y KCG +E+ F
Sbjct: 616 NLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREF 675
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
++ +K++++WN+MI+GY +G G A++ FEEM + G P+ V FV VLSACSH GLVN
Sbjct: 676 FEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVN 735
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
EG F M +E + P+ EHY C+VDLLGRA LL A + ++ MP+EP+A +W TLL++
Sbjct: 736 EGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSA 795
Query: 591 CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVA 650
C +HKN ++ E A + L E + +Y+LLSN+YA SG+W+ + R K +G+KK
Sbjct: 796 CTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEP 855
Query: 651 GQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNV 710
G+SWIEVK IH F G+ L + + E +++L + G V D +L +V
Sbjct: 856 GRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLL------NDV 909
Query: 711 KRIQRIRADNIKSKHRIVGFRNLKL----GLRLLLSLRSTN 747
++ Q+ I S+ V F L L +R++ +LR N
Sbjct: 910 EQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCN 950
Score = 206 bits (524), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 153/642 (23%), Positives = 293/642 (45%), Gaps = 112/642 (17%)
Query: 21 FSIITYNNSLLD--CFDHLLQQC---KTIHQL-KQVHNQLIVTGANASAFLAARVLSIYA 74
FS++ N D F +L+ C K Q+ +Q+H ++I G +S + ++ +Y+
Sbjct: 99 FSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYS 158
Query: 75 RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFT 134
+ G + A+ VFE S+ W +++ NG + A+ L+ +M K V+ +
Sbjct: 159 KNGHVDLAKLVFERLFL---KDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYV 215
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
F V+ AC + F+ G+ +H +++ G + N L+ +Y++ G + + ++F
Sbjct: 216 FSSVLSACTKIELFKL----GEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIF 271
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
K+ ++ IS+N + SG A D AL+LF++M+L+ ++P+ VT
Sbjct: 272 SKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVT--------------- 316
Query: 255 ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
+A +LS CA + A + GK +H +VIK G + ++ +L+
Sbjct: 317 --------------------VASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLL 356
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE--------- 365
+Y K D++ A F E +N+V WN ++ +Y + G E+ +F Q++
Sbjct: 357 DLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQY 416
Query: 366 -------------KLDGGSMERPNVIS---------WSAVIGAFASNGRGEEALDLFRKM 403
LD G VI S +I +A +G + A + +++
Sbjct: 417 TYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRL 476
Query: 404 QLAKVVANSVTISGL-------------------------------LSVCAESAALNIGR 432
+ VV+ + I+G +S CA ALN G+
Sbjct: 477 REEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQ 536
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
+IH ++++ + N L+++Y +CG ++ +L FE+I+ KD I+WN++ISG+ +G
Sbjct: 537 QIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSG 596
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
E AL F +M +AG + + F + +SA ++ + +G++I MM++ + + E
Sbjct: 597 HCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKT-GYDSETEAS 655
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
++ L + G +++A MP E N W ++ H
Sbjct: 656 NVLITLYSKCGSIEDAKREFFEMP-EKNVVSWNAMITGYSQH 696
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 129/549 (23%), Positives = 250/549 (45%), Gaps = 86/549 (15%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K++H ++ +G + L +R++ IY G + +A +F+ P S+ WN ++
Sbjct: 30 KKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIP---SSNVSFWNKVISGL 86
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
++ L L L+ M V D TF V+RAC + F + +H ++ GF
Sbjct: 87 LAKKLASQVLGLFSLMITENVTPDESTFASVLRACS---GGKAPFQVTEQIHAKIIHHGF 143
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ + N LI +Y+K G + + +F+++ +K+ +SW M SG + N D A+ LF +
Sbjct: 144 GSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQ 203
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M + P ++S VLS C +
Sbjct: 204 MHKSAVIPTPYVFSS-----------------------------------VLSACTKIEL 228
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+G+ +HGF++K G FV NAL+ +Y + G++ A+ +FS++ ++ +S+N+LI+
Sbjct: 229 FKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISG 288
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
A+ G D A+++F +++ LD +
Sbjct: 289 LAQRGFSDRALQLFEKMQ-------------------------------LDCMK------ 311
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
+ VT++ LLS CA A G+++H +V+++ M+ +++++ LL++Y+KC +E H
Sbjct: 312 --PDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAH 369
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
F E ++++ WN M+ YG G + F +M G P+ + ++L C+ G
Sbjct: 370 EYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLG 429
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYAC--MVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
++ G +I +++ Q Y C ++D+ + G L A I++ + E + W
Sbjct: 430 ALDLGEQIHTQVIKS---GFQFNVYVCSVLIDMYAKHGELDTARGILQRL-REEDVVSWT 485
Query: 586 TLLNSCRMH 594
++ H
Sbjct: 486 AMIAGYTQH 494
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 196/484 (40%), Gaps = 108/484 (22%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H + + GF G + + LI +Y G++ ++ KLFD + N WN + SG
Sbjct: 32 LHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAKKL 91
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
L LF M E + P+ T+ S
Sbjct: 92 ASQVLGLFSLMITENVTPDESTFAS----------------------------------- 116
Query: 278 VLSVCADLAAD-HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
VL C+ A + + IH +I GF V N LI +Y K+G V
Sbjct: 117 VLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHV------------- 163
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
D A VF +L D +SW A+I + NGR +EA
Sbjct: 164 ------------------DLAKLVFERLFLKDS--------VSWVAMISGLSQNGREDEA 197
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
+ LF +M + V+ S +LS C + +G ++HG +V+ ++ V N L+ +
Sbjct: 198 ILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTL 257
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y + G L +F ++ ++D I++NS+ISG G + AL FE+M KPD V
Sbjct: 258 YSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTV 317
Query: 517 VAVLSACSHAGLVNEGRR-------------------IFDMMVREFRIEPQMEHYAC--- 554
++LSAC+ G +G++ + D+ V+ F IE E++
Sbjct: 318 ASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTET 377
Query: 555 --------MVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTLLNSCRMHKNTDVAEAM 603
M+ G+ G L E+ I M +E PN Y + ++L +C D+ E +
Sbjct: 378 ENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQI 437
Query: 604 ASQI 607
+Q+
Sbjct: 438 HTQV 441
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%)
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
M+ + AN T L C S +L +++H + + + ++ + L+++Y+ G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
++ +F+ I ++ WN +ISG L L F MI PD F +VL A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 523 CS 524
CS
Sbjct: 121 CS 122
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 223/701 (31%), Positives = 350/701 (49%), Gaps = 123/701 (17%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAF---LAARVLSIYARFGRLFDARNVFE 87
+ LLQ+C K+I KQ+H I G +S + L + + + YA G AR +F+
Sbjct: 21 YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFD 80
Query: 88 TAPFDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGV-LGDGFTFPLVIRACKFM 145
+ ++ SL WN+++R+ ++GL +AL L+V+M G D +T+P VI+AC
Sbjct: 81 ----ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKAC--- 133
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
G + G ++H + GF + + N L+ MY G+M + ++FD +R + +SW
Sbjct: 134 GDYLLP-EMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSW 192
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVT-------------------------- 239
N M +G+ N AL +F M +G+EP+ T
Sbjct: 193 NTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEV 252
Query: 240 ---------WTSLLSSHARCGRLEETMDLFDMMRKR----------GIEVGAEA------ 274
W SLL +A+CG ++E +F M KR G + +A
Sbjct: 253 KNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLL 312
Query: 275 ---------------IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
+A VLS CA L + G+ +HG+ I+ E V V+ ALI +Y K
Sbjct: 313 CQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAK 372
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
+V ++ VFS+ K
Sbjct: 373 CNNVNLS-------------------------------FRVFSKXSK--------QRTAP 393
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVV 439
W+A+I NG +A++LF++M + V N T++ LL A L R +HG+++
Sbjct: 394 WNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLI 453
Query: 440 RVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD--LITWNSMISGYGMNGLGENA 497
R I V L+++Y KCG LE H +F I KKD +ITW+++I+GYGM+G GE A
Sbjct: 454 RSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETA 513
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
++ F++M+++G KP+ + F ++L ACSHAGLV+EG +F M+ + ++ + +HY C++D
Sbjct: 514 ISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVID 573
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
LLGRAG L+EA ++++ M PN VWG LL SC +H+N ++ E A +F L TG+
Sbjct: 574 LLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGN 633
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
Y+LL+NIY+A GRW DA VR+ GL+K S IEV+
Sbjct: 634 YVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEVR 674
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 232/794 (29%), Positives = 394/794 (49%), Gaps = 146/794 (18%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANAS-AFLAARVLSIYARFGRLFDARNVFETAPFD 92
+L+ C + L QVH + + G +A+ L R++ +Y R DA VF + P
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRG 104
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKM--RKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ +L WN ++R G Y +AL Y+KM L D TFP V+++C +G+
Sbjct: 105 AAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAI-- 162
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+ G++VH +G G++ + + LI MYA G + D+ ++FD + ++ + WN+M
Sbjct: 163 --ALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMD 220
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWT----------------------------- 241
G+ A+ELF M G EPNF T
Sbjct: 221 GYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLES 280
Query: 242 ------SLLSSHARCGRLEETMDLFDM-------------------------------MR 264
+L+S +A+C L++ LF + M+
Sbjct: 281 EVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQ 340
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
K GI + + +L DL + GK +HG++++ VF+ +AL+ +Y K V+
Sbjct: 341 KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
+AQ+++ + ++V + +I+ Y G+ EAV++F L L+ G RPN ++ ++V+
Sbjct: 401 MAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYL--LEQGI--RPNAVAIASVL 456
Query: 385 GAFAS-------------------NGRG--EEAL-DLFRKMQ--------LAKVVA-NSV 413
A AS GR E AL D++ K +K+ A + V
Sbjct: 457 PACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEV 516
Query: 414 TISGLLSVCAESA----ALNI-------------------------------GREIHGHV 438
T + ++S A++ ALN+ G+EIHG V
Sbjct: 517 TWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVV 576
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
++ + ++ ++ L++MY KCG LE H VFE + +K+ ++WNS+I+ YG GL + ++
Sbjct: 577 IKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESV 636
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
+ M E GFK D V F+A++SAC+HAG V EG R+F M E++I P+MEH+ACMVDL
Sbjct: 637 SLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDL 696
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
RAG L +A +++ +MP +P+A +WG LL++CR+H+N ++AE + ++F L +G Y
Sbjct: 697 YSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYY 756
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
+L+SNI A +GRW+ +KVR K ++K+ G SW++V H+F + + D +++
Sbjct: 757 VLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIY 816
Query: 679 EVLEELALQMENKG 692
L+ + L++ +G
Sbjct: 817 MSLKSILLELREEG 830
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
+ Y+N + I+ K++H +I A F + ++ +Y + G L A
Sbjct: 546 VKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAH 605
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
VFE+ P + + + WNSI+ + GL + ++ L M++ G D TF ++ AC
Sbjct: 606 RVFESMP---EKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACA 662
Query: 144 FMGSFR 149
G +
Sbjct: 663 HAGQVQ 668
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 199/610 (32%), Positives = 327/610 (53%), Gaps = 58/610 (9%)
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
SL W I++ S+GL ++L + +R G+ D FP ++RA F+ Q
Sbjct: 41 SLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFK----HFNLAQ 96
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H V+++GF +++ N L+ MY+K F + R + +++
Sbjct: 97 SLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKI------- 149
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
D +LF RM + + V+W ++++ +A+ G EE +++ M K + + ++
Sbjct: 150 --DSVRKLFDRMPVR----DVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLS 203
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
+L + + A GK IHG+ I+ GF+ VF+ ++LI +Y K V+++
Sbjct: 204 SILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELS---------- 253
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
V F L D ISW+++I NGR ++
Sbjct: 254 ---------------------VCAFHLLSNRDA--------ISWNSIIAGCVQNGRFDQG 284
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
L FR+M KV V+ S ++ CA ALN+G+++H +++R+ + N + + LL+M
Sbjct: 285 LGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDM 344
Query: 457 YMKCGCLEEGHLVFEQIE--KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
Y KCG ++ +F +IE +D+++W ++I G M+G +A++ FEEM+ G KP V
Sbjct: 345 YAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYV 404
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
AF+AVL+ACSHAGLV+EG + F+ M R+F + P +EHYA + DLLGRAG L+EA D + N
Sbjct: 405 AFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISN 464
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
M EP VW TLL +CR HKN ++AE + ++I + G+++++SNIY+A+ RW DA
Sbjct: 465 MGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDA 524
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
AK+R+ + GLKK SWIEV K+H F +G+ + E L L QME +G V
Sbjct: 525 AKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQMEKEGYV 584
Query: 695 PDNDIILWEM 704
D + +L ++
Sbjct: 585 LDTNEVLHDV 594
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 173/361 (47%), Gaps = 19/361 (5%)
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
P+ + W ++ +A G L ++ F+++R GI +L ++ + +
Sbjct: 39 PHSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSL 98
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
H VI+ GF ++ NAL+ +Y K + F + + ++ I
Sbjct: 99 HAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKI--------- 149
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
D ++F ++ D V+SW+ VI A NG EEAL++ ++M + +S T
Sbjct: 150 DSVRKLFDRMPVRD--------VVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFT 201
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
+S +L + E A + G+EIHG+ +R +K++ + + L++MY KC +E F +
Sbjct: 202 LSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLS 261
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
+D I+WNS+I+G NG + L F M++ KP V+F +V+ AC+H +N G++
Sbjct: 262 NRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQ 321
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM-EPNAYVWGTLLNSCRM 593
+ ++R + + ++D+ + G ++ A I + M + + W ++ C M
Sbjct: 322 LHAYIIR-LGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAM 380
Query: 594 H 594
H
Sbjct: 381 H 381
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 161/324 (49%), Gaps = 48/324 (14%)
Query: 83 RNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
R +F+ P + WN+++ N NG+YE AL + +M K + D FT ++
Sbjct: 153 RKLFDRMPV---RDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILP-- 207
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ + + G+ +H + ++ GF +V I + LI MYAK Q+ S F + ++
Sbjct: 208 --IFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDA 265
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
ISWN + +G N D L F+RM E ++P V+++S
Sbjct: 266 ISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSS-------------------- 305
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
V+ CA L A ++GK +H ++I+ GF+D F+ ++L+ +Y K G+
Sbjct: 306 ---------------VIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGN 350
Query: 323 VKVAQNLFSEIE--EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
+K+A+ +F++IE ++++VSW A+I A G +AV +F ++ +DG +P +++
Sbjct: 351 IKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEM-LVDG---VKPCYVAF 406
Query: 381 SAVIGAFASNGRGEEALDLFRKMQ 404
AV+ A + G +E F MQ
Sbjct: 407 MAVLTACSHAGLVDEGWKYFNSMQ 430
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 146/294 (49%), Gaps = 23/294 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K++H I G + F+ + ++ +YA+ ++ + F ++ WNSI+
Sbjct: 219 KEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLS---NRDAISWNSIIAGC 275
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
V NG ++ L + +M K V +F VI AC + + + G+ +H +++++GF
Sbjct: 276 VQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTA----LNLGKQLHAYIIRLGF 331
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV--KNYISWNMMFSGFALNFDCDGALELF 225
N I + L+ MYAK G + + +F+K+ + ++ +SW + G A++ A+ LF
Sbjct: 332 DDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLF 391
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCAD 284
+ M ++G++P +V + ++L++ + G ++E F+ M R G+ G E A V
Sbjct: 392 EEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAV------ 445
Query: 285 LAADHMGKV-----IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
AD +G+ + F+ G E V + L+ H ++++A+ + ++I
Sbjct: 446 --ADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKI 497
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++ C + L KQ+H +I G + + F+A+ +L +YA+ G + AR +F
Sbjct: 303 FSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIE 362
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
C + W +I+ +G +A+ L+ +M GV F V+ AC G
Sbjct: 363 M-CDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAG 417
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 198/632 (31%), Positives = 345/632 (54%), Gaps = 55/632 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA-RFGRLFD--ARNVFETAPFDC 93
+L++CK++ QLKQ+ Q++ TG + F A+R+++ A + D R ++ +
Sbjct: 63 ILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNV 122
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL-GDGFTFPLVIRACKFMGSFRFRF 152
S WN+ +R V +G E LY +M G L D T+PL+++ C G +
Sbjct: 123 FS----WNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGC--CGQYSSCL 176
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G V HVL+ GF+ ++ + N I M G++S ++ +F+K RV++ ++WN M +G
Sbjct: 177 GLG--VLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGC 234
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
A++++K ME E + PN +T ++SS
Sbjct: 235 VKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISS-------------------------- 268
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
C+ + ++GK H ++ + G E + + NAL+ +Y K G++ A+ LF
Sbjct: 269 ---------CSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDN 319
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ +K +VSW ++ YA G D A E+ ++ + +V+ W+A+I +
Sbjct: 320 MAQKTLVSWTTMVLGYARFGFLDVAREILYKIPE--------KSVVPWNAIISGCVQAKQ 371
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
G+EAL LF +MQ+ + + VT+ LS C++ AL++G IH ++ R ++ ++ +
Sbjct: 372 GKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTA 431
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++MY KCG + VFE+I +++ +TW ++I G ++G ++AL+ F +MI G PD
Sbjct: 432 LVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPD 491
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
+ F+ VLSAC H GLV EGR+ F M +F + P+++HY+CMVDLLGRAG L+EA ++V
Sbjct: 492 EITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELV 551
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
KNMPM +A V G L +CR++ N + E A ++ + + +G+Y+LL+++Y+ + W+
Sbjct: 552 KNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWK 611
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
+A R KG++K G S +E+ +H F
Sbjct: 612 EARSARKLMNDKGVEKTPGCSLVEINGIVHEF 643
>gi|449523327|ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 1090
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 215/728 (29%), Positives = 363/728 (49%), Gaps = 88/728 (12%)
Query: 21 FSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLF 80
S TY N L C D +I +++H ++ + + F+ +++S+YA+ G L
Sbjct: 78 LSTNTYINLLQTCID-----VGSIELGRELHVRMGLV-HRVNPFVETKLVSMYAKCGCLK 131
Query: 81 DARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR 140
DAR VF+ + + W++++ ++ ++L+ M GVL D F FP +++
Sbjct: 132 DARKVFDGMQ---ERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQ 188
Query: 141 ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
AC +++H+ V++ G + + N ++ + K G++S + K F + +
Sbjct: 189 ACGNCEDLETV----KLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDER 244
Query: 201 NYISWNMMFSGFALNF-----------------------------------DCDGALELF 225
+ +SWN+M +G+ DCD ++L
Sbjct: 245 DGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLK 304
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
K+ME GL P+ TWTS++S ++ R+ + +D F M G+E IA S CA L
Sbjct: 305 KKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASL 364
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+ G IH F IK G V N+LI +Y K G ++ A+++F I EK++ +WN++I
Sbjct: 365 KSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMI 424
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF----- 400
Y +AG +A E+F +L + S PNV++W+A+I NG ++A+DLF
Sbjct: 425 GGYCQAGYGGKAYELFMRLRE----STVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEK 480
Query: 401 -------------------------------RKMQLAKVVANSVTISGLLSVCAESAALN 429
R+MQ NSVTI +L CA A
Sbjct: 481 DGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEK 540
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
+EIHG V+R ++ + V N L++ Y K G ++ VF + KD+ITWNS+I+GY
Sbjct: 541 KIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYI 600
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
++G ++A F++M G +P+ +++ A AG+V++GR +F + E +I P +
Sbjct: 601 LHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTL 660
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
+HY MVDL GR+G L +A + +++MP+EP+ +W +LL +CR H N ++A A ++
Sbjct: 661 DHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAAKRLHE 720
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
L + Y LL YA G++E KVR K +KK Q W+EV+ K+H+F +G+
Sbjct: 721 LEPDNHVIYRLLVQAYALYGKFEQTLKVRKLGKESAMKKCTAQCWVEVRNKVHLFVTGDQ 780
Query: 670 LQSDLKNV 677
+ D+ N
Sbjct: 781 SKLDVLNT 788
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 151/348 (43%), Gaps = 52/348 (14%)
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV--F 308
G L E + D + KRG ++ +L C D+ + +G+ +H ++ G V F
Sbjct: 59 GLLREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELH---VRMGLVHRVNPF 115
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V+ L+ +Y K G +K A+ +F ++E+N+ +W+A+I +Y+ E VE+F
Sbjct: 116 VETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELF------- 168
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
F G G V+ ++ +L C L
Sbjct: 169 ------------------FLMMGDG--------------VLPDAFLFPKILQACGNCEDL 196
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+ IH V+R ++ + + N +L ++KCG L F ++++D ++WN MI+GY
Sbjct: 197 ETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGY 256
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM--MVREFRIE 546
G G+ A + M GFKP V + ++++ S G + + D+ + +
Sbjct: 257 CQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLG---DCDLVIDLKKKMESVGLA 313
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPM---EPNAYVWGTLLNSC 591
P + + M+ ++ + +A D K M + EPN + ++C
Sbjct: 314 PDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSAC 361
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 15/233 (6%)
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH---GHVVRVSMNK 445
SNG EA+ + ++ T LL C + ++ +GRE+H G V RV
Sbjct: 57 SNGLLREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELHVRMGLVHRV---- 112
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
N V+ L++MY KCGCL++ VF+ +++++L TW++MI Y + + F M+
Sbjct: 113 NPFVETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMM 172
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
G PD F +L AC + + + I +++R + M ++ + G L
Sbjct: 173 GDGVLPDAFLFPKILQACGNCEDLETVKLIHSLVIR-CGLSCYMRLSNSILTAFVKCGKL 231
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA----EAMASQIF--GLIT 612
A NM E + W ++ N D A + M++Q F GL+T
Sbjct: 232 SLARKFFGNMD-ERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVT 283
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 202/657 (30%), Positives = 354/657 (53%), Gaps = 55/657 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA-RFGRLFD--ARNVFETAPFDC 93
+L++CK++ QLKQ+ Q++ TG + F A+R+++ A + D R ++ +
Sbjct: 63 ILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNV 122
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL-GDGFTFPLVIRACKFMGSFRFRF 152
S WN+ +R V +G E LY +M G L D T+PL+++ C G +
Sbjct: 123 FS----WNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGC--CGQYSSCL 176
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G V HVL+ GF+ ++ + N I M G++S ++ +F+K RV++ ++WN M +G
Sbjct: 177 GLG--VLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGC 234
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
A++++K ME E + PN +T ++SS
Sbjct: 235 VKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISS-------------------------- 268
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
C+ + ++GK H ++ + G E + + NAL+ +Y K G++ A+ LF
Sbjct: 269 ---------CSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDN 319
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ +K +VSW ++ YA G D A E+ ++ + +V+ W+A+I +
Sbjct: 320 MAQKTLVSWTTMVLGYARFGFLDVAREILYKIPE--------KSVVPWNAIISGCVQAKQ 371
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
G+EAL LF +MQ+ + + VT+ LS C++ AL++G IH ++ R ++ ++ +
Sbjct: 372 GKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTA 431
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++MY KCG + VFE+I +++ +TW ++I G ++G ++AL+ F +MI G PD
Sbjct: 432 LVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPD 491
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
+ F+ VLSAC H GLV EGR+ F M +F + P+++HY+CMVDLLGRAG L+EA ++V
Sbjct: 492 EITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELV 551
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
KNMPM +A V G L +CR++ N + E A ++ + + +G+Y+LL+++Y+ + W+
Sbjct: 552 KNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWK 611
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
+A R KG++K G S +E+ +H F + + + E L L Q++
Sbjct: 612 EARSARKLMNDKGVEKTPGCSLVEINGIVHEFVVRDVSHPQSEWIYECLVTLTKQLD 668
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 207/676 (30%), Positives = 351/676 (51%), Gaps = 63/676 (9%)
Query: 51 HNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSN 110
H + G ++ F+ ++++Y+R G L DA VF+ + WNSI+ +V
Sbjct: 172 HGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKG 231
Query: 111 GLYENALKLYVKM------RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
AL L+ +M + D + ++ AC + + + +H++ ++
Sbjct: 232 SNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKAL----PQTKEIHSYAIR 287
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
G + + N LI YAK G M D+ +F+ + K+ +SWN M +G+ + A EL
Sbjct: 288 NGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFEL 347
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
FK M E + + +TW+++++ +A+ G +E +D F M G E + I +LS CA
Sbjct: 348 FKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACAS 407
Query: 285 LAADHMGKVIHGFVIKGGF------------EDYVFVKNALICVYGKHGDVKVAQNLFSE 332
L A G H + +K + + V NALI +Y K K A+ +F+
Sbjct: 408 LGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNS 467
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
I + ER NV++W+ +IG +A G
Sbjct: 468 IPRR------------------------------------ER-NVVTWTVMIGGYAQYGD 490
Query: 393 GEEALDLFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN--IL 448
+AL LF +M + V N+ TIS +L CA ++L +G++IH +V R ++
Sbjct: 491 SNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYF 550
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
V N L++MY KCG ++ VF+ + K++ ++W SM+SGYGM+G G+ AL F++M +AG
Sbjct: 551 VANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAG 610
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
F PD ++F+ +L ACSH+G+V++G FD+M ++ + +HYAC++DLL R+G L +A
Sbjct: 611 FVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKA 670
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
++ MPMEP+A +W LL++CR+H N ++AE +++ + E GSY L+SNIYA +
Sbjct: 671 WKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATA 730
Query: 629 GRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
RW+D A++R K G+KK G SW++ K+ F G+ + +LE L ++
Sbjct: 731 RRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRI 790
Query: 689 ENKGCVPDNDIILWEM 704
+ G VP+ + L ++
Sbjct: 791 KVMGYVPETNFALHDV 806
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 171/602 (28%), Positives = 290/602 (48%), Gaps = 83/602 (13%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGA---------------NASAFLAAR-----VLSIY 73
F LL++C++++ ++Q+H ++I G + ++++ + V++ Y
Sbjct: 34 FASLLKECRSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGVVASY 93
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
G DA +V E S ++ WN ++R ++ G + A+ + +M + G D F
Sbjct: 94 LACGATSDALSVLERV---VPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHF 150
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
T P ++AC + S+R G H + GF+ NV + N L+ MY++ G + D+ +
Sbjct: 151 TLPYALKACGELPSYR----SGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLV 206
Query: 194 FDKVR---VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
FD++ + + ISWN + + + AL+LF M T+++ A
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEM------------TTIVHEKA-- 252
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
E D+ +I +L CA L A K IH + I+ G FV
Sbjct: 253 --TNERSDII-------------SIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVC 297
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
NALI Y K G +K A N+F+ +E K++VSWNA++T Y ++G A E+F + K +
Sbjct: 298 NALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKEN-- 355
Query: 371 SMERP-NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
P +VI+WSAVI +A G G+EALD F++M L NSVTI LLS CA AL+
Sbjct: 356 ---IPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALS 412
Query: 430 IGREIHGHVVRVSM------------NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
G E H + ++ + ++++V N L++MY KC + +F I +++
Sbjct: 413 QGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRE 472
Query: 478 --LITWNSMISGYGMNGLGENALATFEEMIEAGF--KPDGVAFVAVLSACSHAGLVNEGR 533
++TW MI GY G +AL F EMI + P+ +L AC+H + G+
Sbjct: 473 RNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGK 532
Query: 534 RIFDMMVREFRIEPQMEHYA-CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
+I + R E + A C++D+ + G + A ++ +MP N W ++++
Sbjct: 533 QIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKR-NEVSWTSMMSGYG 591
Query: 593 MH 594
MH
Sbjct: 592 MH 593
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 212/686 (30%), Positives = 339/686 (49%), Gaps = 84/686 (12%)
Query: 16 NPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYAR 75
NP P S +LL L + KT+ Q++ Q++V + S + Y +
Sbjct: 4 NPFPPISSRNPTKTLLS----LFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQ 59
Query: 76 FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
G L A F F+ S WN+IL + N + + L+L+ +M K G L D F
Sbjct: 60 LGSLHVASKAFNHITFENLHS---WNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNL 116
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
++AC + F+ ++ H+ +++ +G+ ++ L+ +Y ++G + ++ K+F+
Sbjct: 117 VFAVKACFGLSLFQG----AKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFE 172
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
+V +KN + W +M G LNF E F EL
Sbjct: 173 EVPLKNSVIWGVMIKG-HLNFS-----EEFGVFEL------------------------- 201
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
F MR+ G E+ + ++ C ++ A GK HG IK F D
Sbjct: 202 ----FSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFID---------- 247
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
N F + +L+ Y + G D A+++F ++ D
Sbjct: 248 -----------SNFFLQ---------TSLVDMYMKCGFLDFALKLFEEISYRD------- 280
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH 435
V+ WSA+I FA NGR E++ +FR+M V NSVT + ++ C+ +L GR +H
Sbjct: 281 -VVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVH 339
Query: 436 GHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
G+++R + ++ ++MY KCGC+ + VF QI +K++ +W++MI+G+GM+GL
Sbjct: 340 GYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCA 399
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
AL F EM P+ V FV+VLSACSH+G + EG F M R++ I P EHYACM
Sbjct: 400 EALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACM 459
Query: 556 VDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETT 615
VDLLGRAG + EA + NMP EP A WG LL +CR+H+ ++AE +A ++ L ++ +
Sbjct: 460 VDLLGRAGKIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQS 519
Query: 616 GSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLK 675
G Y++LSNIYA G WE K R+ KG+ K+ G + IE++ K+++FSS +
Sbjct: 520 GVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNT 579
Query: 676 NVCEVLEELALQMENKGCVPDNDIIL 701
+ + L +M G VPD +L
Sbjct: 580 QIESLWNSLKERMRELGYVPDLRFVL 605
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 212/690 (30%), Positives = 369/690 (53%), Gaps = 62/690 (8%)
Query: 4 SLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASA 63
SL H H+ P+N + +I +N LL LL+ C ++ ++K++H Q+I TG +
Sbjct: 34 SLPH--HKDKPTNWNASHVLIQ-SNPLLS----LLEACTSMAKMKEIHAQMISTGLISDG 86
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSL---LWNSILRVNVSNGLYENALKLY 120
F +R+++ F + + RN+ +++L WN +R V + NA+ LY
Sbjct: 87 FALSRLVA----FCAISEWRNLDYCDKILNNAANLNXFSWNMAIRGYVESENPINAVLLY 142
Query: 121 VKM-RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
M RK + D +T+PL+ + C F ++ +I+ HV+Q+GF ++ + N +I
Sbjct: 143 RNMLRKGSAIPDNYTYPLLFKVC---AGFSLSWTANEIL-GHVIQLGFDSDLFVHNAIIH 198
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
+ G++ + KLFD+ V++ +SWN
Sbjct: 199 VLVSCGELLAARKLFDESCVRDLVSWN--------------------------------- 225
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
S+++ + RCG +E DL+ M + + + V+S A L +G+ +H +
Sbjct: 226 --SIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIE 283
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
+ G V + NAL+ +Y K +++ A+ LF + +K +VSW ++ YA+ GL + AV
Sbjct: 284 EMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVR 343
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
+F+++ + D V+ W+A+IG F R +EAL LF +MQ + V + +T+ L
Sbjct: 344 LFNEMPEKD--------VVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCL 395
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
S C++ AL++G +H +V + ++ N+ + L++MY KCG +++ VFE++ ++ +
Sbjct: 396 SACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSL 455
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
TW ++I G ++G A++ F EMI G PD + F+ VLSAC H GLV++GR F M
Sbjct: 456 TWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQM 515
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
++ I P+++HY+C+VDLLGRAG L+EA +++++MP EP+A VWG L R+H N +
Sbjct: 516 TSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHM 575
Query: 600 AEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKR 659
E AS++ L G Y+LL+N+Y + WE A KVR + +G++K G S IE+
Sbjct: 576 GERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNG 635
Query: 660 KIHMFSSGNSLQSDLKNVCEVLEELALQME 689
++ F + + + E L L Q+E
Sbjct: 636 LVYDFIIRDKSHPQSEKIYECLTRLTRQIE 665
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 319/574 (55%), Gaps = 47/574 (8%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N+L+ +YAK G++ D+ LFDK+ ++ SWN + S +A + F RM
Sbjct: 62 NQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFR--- 118
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
+ V++ + ++ + +E+++LF M++ G E I +L+ A L+ GK I
Sbjct: 119 -DSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQI 177
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA----- 349
HG +I F VF+ NAL +Y K G+++ A+ LF + +KN+VSWN +I+ YA
Sbjct: 178 HGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQP 237
Query: 350 ------------------------------EAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
+ G DEA VFS+ ++ D ++
Sbjct: 238 EKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKD--------IVC 289
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVV 439
W+A++ +A NGR E+AL LF +M L + +S T+S ++S CA+ A+L+ G+ +HG +
Sbjct: 290 WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSI 349
Query: 440 RVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
+N N+LV + L++MY KCG +++ VF + +++++WN+MI G NG ++AL
Sbjct: 350 LAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALE 409
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
FE M++ FKPD V F+ +LSAC H + +G+ FD + + + P ++HYACMV+LL
Sbjct: 410 LFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLL 469
Query: 560 GRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYM 619
GR G +++A ++KNM +P+ +W TLL+ C + AE A +F L Y+
Sbjct: 470 GRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYI 529
Query: 620 LLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCE 679
+LSN+YA+ GRW+D A VR K+K +KK AG SWIE+ ++H F+S + + +++ E
Sbjct: 530 MLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYE 589
Query: 680 VLEELALQMENKGCVPDNDIILWEMMGKKNVKRI 713
L L +++ +G P+ +++L ++ + K I
Sbjct: 590 KLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSI 623
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 157/287 (54%), Gaps = 16/287 (5%)
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
F+ N L+ +Y K G ++ AQNLF ++ +++I SWNAL+++YA++G F ++
Sbjct: 59 FLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFR 118
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
D +S++ I F+ N +E+L+LF++MQ TI +L+ A+ +
Sbjct: 119 DS--------VSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSD 170
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L G++IHG ++ + N+ + N L +MY KCG +E+ +F+ + KK+L++WN MISG
Sbjct: 171 LRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISG 230
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
Y NG E + +M +G PD V +++A G V+E RR+F EF+ E
Sbjct: 231 YAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFS----EFK-EK 285
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNM---PMEPNAYVWGTLLNSC 591
+ + M+ + G ++A + M +EP++Y ++++SC
Sbjct: 286 DIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 136/549 (24%), Positives = 228/549 (41%), Gaps = 155/549 (28%)
Query: 61 ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYEN----- 115
+FL ++L +YA+FG+L DA+N+F+ K WN++L +G +N
Sbjct: 56 TDSFLHNQLLHLYAKFGKLRDAQNLFDKM---LKRDIFSWNALLSAYAKSGSIQNLKATF 112
Query: 116 --------------------------ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
+L+L+ +M++ G +T ++ A + R
Sbjct: 113 DRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLR 172
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
+ G+ +H ++ F GNV I N L MYAK G++ + LFD + KN +SWN+M
Sbjct: 173 Y----GKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMI 228
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVT------------------------------ 239
SG+A N + + L +M L G P+ VT
Sbjct: 229 SGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIV 288
Query: 240 -WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
WT+++ +A+ GR E+ + LF+ M IE + ++ V+S CA LA+ H G+ +HG
Sbjct: 289 CWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKS 348
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
I G + + V +ALI +Y K G + A+++F+ + +N+VSWNA+I A+ G
Sbjct: 349 ILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNG------ 402
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
++AL+LF M K ++VT G+
Sbjct: 403 ---------------------------------HDKDALELFENMLQQKFKPDNVTFIGI 429
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
LS C + C +E+G F+ I +
Sbjct: 430 LSAC-----------------------------------LHCNWIEQGQEYFDSITNQHG 454
Query: 479 IT-----WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG-LVN-- 530
+T + M++ G G E A+A + M PD + + +LS CS G +VN
Sbjct: 455 MTPTLDHYACMVNLLGRTGRIEQAVALIKNM---AHDPDFLIWSTLLSICSTKGDIVNAE 511
Query: 531 -EGRRIFDM 538
R +F++
Sbjct: 512 VAARHLFEL 520
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 163/361 (45%), Gaps = 19/361 (5%)
Query: 52 NQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNG 111
+Q+ ++G + +++ Y + GR+ +AR VF + + W +++ NG
Sbjct: 245 HQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFK---EKDIVCWTAMMVGYAKNG 301
Query: 112 LYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNV 171
E+AL L+ +M + D +T V+ +C + S GQ VH + G N+
Sbjct: 302 REEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHH----GQAVHGKSILAGLNNNL 357
Query: 172 HIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELE 231
+ + LI MY+K G + D+ +F+ + +N +SWN M G A N ALELF+ M +
Sbjct: 358 LVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQ 417
Query: 232 GLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHM 290
+P+ VT+ +LS+ C +E+ + FD + + G+ + A ++++
Sbjct: 418 KFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLG-----RT 472
Query: 291 GKVIHGF-VIKGGFEDYVF-VKNALICVYGKHGDV---KVAQNLFSEIEEKNIVSWNALI 345
G++ +IK D F + + L+ + GD+ +VA E++ V + L
Sbjct: 473 GRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLS 532
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE-EALDLFRKMQ 404
YA G + V + ++ + + I + F S R E+ D++ K+
Sbjct: 533 NMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLN 592
Query: 405 L 405
+
Sbjct: 593 M 593
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 108/229 (47%), Gaps = 10/229 (4%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
++H + VH + I+ G N + +++ ++ +Y++ G + DAR+VF P + + WN+
Sbjct: 337 SLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMP---TRNVVSWNA 393
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRFSFGQIVHNH 161
++ NG ++AL+L+ M + D TF ++ AC + + F I + H
Sbjct: 394 MIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQH 453
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
+ +VN L+G ++ Q K + +++ W+ + S + D A
Sbjct: 454 GMTPTLDHYACMVN-LLGRTGRIEQAVALIK--NMAHDPDFLIWSTLLSICSTKGDIVNA 510
Query: 222 LELFKRMELEGLEPNF-VTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
E+ R E L+P V + L + +A GR ++ + ++M+ + ++
Sbjct: 511 -EVAARHLFE-LDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVK 557
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 212/690 (30%), Positives = 369/690 (53%), Gaps = 62/690 (8%)
Query: 4 SLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASA 63
SL H H+ P+N + +I +N LL LL+ C ++ ++K++H Q+I TG +
Sbjct: 34 SLPH--HKDKPTNWNASHVLIQ-SNPLLS----LLEACTSMAKMKEIHAQMISTGLISDG 86
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSL---LWNSILRVNVSNGLYENALKLY 120
F +R+++ F + + RN+ +++L WN +R V + NA+ LY
Sbjct: 87 FALSRLVA----FCAISEWRNLDYCDKILNNAANLNVFSWNMAIRGYVESENPINAVLLY 142
Query: 121 VKM-RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
M RK + D +T+PL+ + C F ++ +I+ HV+Q+GF ++ + N +I
Sbjct: 143 RNMLRKGSAIPDNYTYPLLFKVC---AGFSLSWTANEIL-GHVIQLGFDSDLFVHNAIIH 198
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
+ G++ + KLFD+ V++ +SWN
Sbjct: 199 VLVSCGELLAARKLFDESCVRDLVSWN--------------------------------- 225
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
S+++ + RCG +E DL+ M + + + V+S A L +G+ +H +
Sbjct: 226 --SIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIE 283
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
+ G V + NAL+ +Y K +++ A+ LF + +K +VSW ++ YA+ GL + AV
Sbjct: 284 EMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVR 343
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
+F+++ + D V+ W+A+IG F R +EAL LF +MQ + V + +T+ L
Sbjct: 344 LFNEMPEKD--------VVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCL 395
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
S C++ AL++G +H +V + ++ N+ + L++MY KCG +++ VFE++ ++ +
Sbjct: 396 SACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSL 455
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
TW ++I G ++G A++ F EMI G PD + F+ VLSAC H GLV++GR F M
Sbjct: 456 TWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQM 515
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
++ I P+++HY+C+VDLLGRAG L+EA +++++MP EP+A VWG L R+H N +
Sbjct: 516 TSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHM 575
Query: 600 AEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKR 659
E AS++ L G Y+LL+N+Y + WE A KVR + +G++K G S IE+
Sbjct: 576 GERAASKLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNG 635
Query: 660 KIHMFSSGNSLQSDLKNVCEVLEELALQME 689
++ F + + + E L L Q+E
Sbjct: 636 LVYDFIIRDKSHPQSEKIYECLTRLTRQIE 665
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 197/557 (35%), Positives = 301/557 (54%), Gaps = 69/557 (12%)
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
NV ++G Y + ++SD+ KLF+++ KN +SWN M G+A N D A+ LF++M
Sbjct: 114 NVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMP 173
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
E N V+W +++S A+CGR+EE LFD M +R
Sbjct: 174 ----ERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERD---------------------- 207
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
V A+I K+G + A+ LF + E+N+VSWNA+IT YA
Sbjct: 208 -----------------VISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYA 250
Query: 350 EAGLCDEAVEVFSQLEKLDGGS-----------------------MERPNVISWSAVIGA 386
+ DEA+++F ++ + D S M + NVISW+ +I
Sbjct: 251 QNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITG 310
Query: 387 FASNGRGEEALDLFRKM-QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
G EEAL +F +M N T +L C+ A L G+++H + +
Sbjct: 311 CVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQD 370
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQ--IEKKDLITWNSMISGYGMNGLGENALATFEE 503
+ V + L+NMY KCG L +F+ ++DL++WN +I+ Y +G G+ A+ F+E
Sbjct: 371 STFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKE 430
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M ++GFKPD V +V +LSACSHAGLV EG + FD +V++ I + +HYAC+VDL GRAG
Sbjct: 431 MRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAG 490
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
L+EA ++ + +P+A VWG LL C +H N + + A ++ + E G+Y+LLSN
Sbjct: 491 RLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSN 550
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
IYA++G+W +AA+VR+ K KGLKK G SWIEV ++H+F G+ S K + +L +
Sbjct: 551 IYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRD 610
Query: 684 LALQMENKGCVPDNDII 700
L +M+ G P+ND I
Sbjct: 611 LHSKMKKAGYEPNNDFI 627
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 203/446 (45%), Gaps = 56/446 (12%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
+C I + +++ +++ A + ++ Y R ++ DA +F P + +
Sbjct: 95 KCGMIEEARRLFDRV---DAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMP---NKNVVS 148
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN+++ NG ++A+ L+ KM + V+ ++ + + + R F ++
Sbjct: 149 WNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRL---FDRMPE 205
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
V+ +I +K G++ ++ LFD++ +N +SWN M +G+A N D
Sbjct: 206 RDVISW---------TAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLD 256
Query: 220 GALELFKRMELEGL---------------------------EPNFVTWTSLLSSHARCGR 252
AL+LF+RM L + N ++WT++++ + G
Sbjct: 257 EALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGE 316
Query: 253 LEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
EE + +F M+ G + VL C++LA G+ +H + K ++D FV +
Sbjct: 317 SEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVS 376
Query: 312 ALICVYGKHGDVKVAQNLFSE--IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
ALI +Y K G++ A+ +F + ++++VSWN +I +YA G EA+ F ++ K
Sbjct: 377 ALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRK--- 433
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKM-QLAKVVANSVTISGLLSVCAESAAL 428
S +P+ +++ ++ A + G EE L F ++ + ++ + L+ +C + L
Sbjct: 434 -SGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRL 492
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLL 454
+E G + R+ + V LL
Sbjct: 493 ---KEAFGFIERLETKPSARVWGALL 515
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 153/307 (49%), Gaps = 29/307 (9%)
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
N +I K G + A+ LF E+ E ++++W +I+ Y + G+ +EA +F +++
Sbjct: 56 NWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDA---- 111
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
+ NV++W+A++G + + + +A LF +M VV+ + I G +A+ +
Sbjct: 112 ---KKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYL 168
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
++ +N++ N +++M +CG +EE +F+++ ++D+I+W +MI+G
Sbjct: 169 FEKMP--------ERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSK 220
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
NG + A F+ M E V++ A+++ + ++E +F+ M E +
Sbjct: 221 NGRIDEARLLFDRMPERNV----VSWNAMITGYAQNLRLDEALDLFERMP-----ERDLP 271
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL 610
+ M+ L + G L+ A + MP + N W T++ C ++ EA+ +IF
Sbjct: 272 SWNTMITGLIQNGDLRRARKLFNEMP-KKNVISWTTMITGCVQEGESE--EAL--KIFSR 326
Query: 611 ITETTGS 617
+ T G+
Sbjct: 327 MLSTNGA 333
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 149/314 (47%), Gaps = 20/314 (6%)
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL-GVLGDGFTF 135
G L AR +F P K + + W +++ V G E ALK++ +M G + TF
Sbjct: 284 GDLRRARKLFNEMP---KKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTF 340
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
V+ AC + GQ VH + + +Q + +V+ LI MY+K G++ + K+FD
Sbjct: 341 VSVLGACSNLAGL----GEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFD 396
Query: 196 K--VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
++ +SWN + + +A + A+ FK M G +P+ VT+ LLS+ + G +
Sbjct: 397 DGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLV 456
Query: 254 EETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
EE + FD +++ R I V + A ++ +C A + K GF+ + + V A
Sbjct: 457 EEGLKYFDELVKDRSILVREDHYACLVDLCG--RAGRL-KEAFGFIERLETKPSARVWGA 513
Query: 313 LICVYGKHGDVKV---AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
L+ H +VK+ A E+E +N ++ L YA G EA V +L+ D
Sbjct: 514 LLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARV--RLKMKDK 571
Query: 370 GSMERPNVISWSAV 383
G ++P SW V
Sbjct: 572 GLKKQPGC-SWIEV 584
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
+++ N+ N ++ K G + E +F+++ + D+ITW ++ISGY G+ E A F
Sbjct: 47 TVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLF 106
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
+ ++A K + V + A++ + +++ ++F+ M + + + M+D +
Sbjct: 107 DR-VDA--KKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNK-----NVVSWNTMIDGYAQ 158
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLN 589
G + A + + MP E N W T+++
Sbjct: 159 NGRIDSAMYLFEKMP-ERNVVSWNTVMS 185
>gi|449470126|ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Cucumis sativus]
Length = 1463
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 215/728 (29%), Positives = 363/728 (49%), Gaps = 88/728 (12%)
Query: 21 FSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLF 80
S TY N L C D +I +++H ++ + + F+ +++S+YA+ G L
Sbjct: 78 LSTNTYINLLQTCID-----VGSIELGRELHVRMGLV-HRVNPFVETKLVSMYAKCGCLK 131
Query: 81 DARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR 140
DAR VF+ + + W++++ ++ ++L+ M GVL D F FP +++
Sbjct: 132 DARKVFDGMQ---ERNLYTWSAMIGAYSREQRWKEVVELFFLMMGDGVLPDAFLFPKILQ 188
Query: 141 ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
AC +++H+ V++ G + + N ++ + K G++S + K F + +
Sbjct: 189 ACGNCEDLETV----KLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDER 244
Query: 201 NYISWNMMFSGFALNF-----------------------------------DCDGALELF 225
+ +SWN+M +G+ DCD ++L
Sbjct: 245 DGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCDLVIDLK 304
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
K+ME GL P+ TWTS++S ++ R+ + +D F M G+E IA S CA L
Sbjct: 305 KKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSACASL 364
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+ G IH F IK G V N+LI +Y K G ++ A+++F I EK++ +WN++I
Sbjct: 365 KSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMI 424
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF----- 400
Y +AG +A E+F +L + S PNV++W+A+I NG ++A+DLF
Sbjct: 425 GGYCQAGYGGKAYELFMRLRE----STVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEK 480
Query: 401 -------------------------------RKMQLAKVVANSVTISGLLSVCAESAALN 429
R+MQ NSVTI +L CA A
Sbjct: 481 DGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEK 540
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
+EIHG V+R ++ + V N L++ Y K G ++ VF + KD+ITWNS+I+GY
Sbjct: 541 KIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYI 600
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
++G ++A F++M G +P+ +++ A AG+V++GR +F + E +I P +
Sbjct: 601 LHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTL 660
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
+HY MVDL GR+G L +A + +++MP+EP+ +W +LL +CR H N ++A A ++
Sbjct: 661 DHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAAKRLHE 720
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
L + Y LL YA G++E KVR K +KK Q W+EV+ K+H+F +G+
Sbjct: 721 LEPDNHVIYRLLVQAYALYGKFEQTLKVRKLGKESAMKKCTAQCWVEVRNKVHLFVTGDQ 780
Query: 670 LQSDLKNV 677
+ D+ N
Sbjct: 781 SKLDVLNT 788
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 151/348 (43%), Gaps = 52/348 (14%)
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV--F 308
G L E + D + KRG ++ +L C D+ + +G+ +H ++ G V F
Sbjct: 59 GLLREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELH---VRMGLVHRVNPF 115
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V+ L+ +Y K G +K A+ +F ++E+N+ +W+A+I +Y+ E VE+F
Sbjct: 116 VETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELF------- 168
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
F G G V+ ++ +L C L
Sbjct: 169 ------------------FLMMGDG--------------VLPDAFLFPKILQACGNCEDL 196
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+ IH V+R ++ + + N +L ++KCG L F ++++D ++WN MI+GY
Sbjct: 197 ETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGY 256
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM--MVREFRIE 546
G G+ A + M GFKP V + ++++ S G + + D+ + +
Sbjct: 257 CQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGDCD---LVIDLKKKMESVGLA 313
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPM---EPNAYVWGTLLNSC 591
P + + M+ ++ + +A D K M + EPN + ++C
Sbjct: 314 PDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIASATSAC 361
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 15/233 (6%)
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH---GHVVRVSMNK 445
SNG EA+ + ++ T LL C + ++ +GRE+H G V RV
Sbjct: 57 SNGLLREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELHVRMGLVHRV---- 112
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
N V+ L++MY KCGCL++ VF+ +++++L TW++MI Y + + F M+
Sbjct: 113 NPFVETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMM 172
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
G PD F +L AC + + + I +++R + M ++ + G L
Sbjct: 173 GDGVLPDAFLFPKILQACGNCEDLETVKLIHSLVIR-CGLSCYMRLSNSILTAFVKCGKL 231
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA----EAMASQIF--GLIT 612
A NM E + W ++ N D A + M++Q F GL+T
Sbjct: 232 SLARKFFGNMD-ERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVT 283
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 217/661 (32%), Positives = 330/661 (49%), Gaps = 82/661 (12%)
Query: 66 AARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
++ ++ YAR G+L AR VF+ P ++ S WN+++ AL L+ KM
Sbjct: 25 SSYAIACYARNGQLDHARKVFDETPLPHRTVSS-WNAMVAAYFEARQPREALLLFEKMP- 82
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
Q N N LI + K G
Sbjct: 83 ------------------------------------------QRNTVSWNGLISGHIKNG 100
Query: 186 QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
+S++ ++FD + +N +SW M G+ N D A LF M N V+WT +L
Sbjct: 101 MLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMP----HKNVVSWTVMLG 156
Query: 246 SHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
+ GR+++ LFDMM ++ + I C + D + +
Sbjct: 157 GLLQEGRVDDARKLFDMMPEKDVVAVTNMIG---GYCEEGRLDEARALFDEMPKRN---- 209
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
V A++ Y ++G V VA+ LF + E+N VSW A++ Y +G EA +F +
Sbjct: 210 -VVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMP 268
Query: 366 --------------KLDG----------GSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
L+G G ER N +WSA+I + G EAL LFR
Sbjct: 269 VKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNG-TWSAMIKVYERKGYELEALGLFR 327
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+MQ + N ++ +LSVC A+L+ G+++H +VR ++++ V + L+ MY+KCG
Sbjct: 328 RMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCG 387
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
L VF + KD++ WNSMI+GY +GLGE AL F +M +G PD V F+ VLS
Sbjct: 388 NLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLS 447
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
ACS++G V EG +F+ M ++++EP +EHYAC+VDLLGRA + EA +V+ MPMEP+A
Sbjct: 448 ACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDA 507
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISA 641
VWG LL +CR H D+AE ++ L + G Y+LLSN+YA GRW D +R
Sbjct: 508 IVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKI 567
Query: 642 KTKGLKKVAGQSWIEVKRKIHMFSSGNSL-QSDLKNVCEVLEELALQMENKGCVPDNDII 700
K + + K+ G SWIEV++K+HMF+ G+S + + ++LE+L + G PD +
Sbjct: 568 KARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLREAGYCPDGSFV 627
Query: 701 L 701
L
Sbjct: 628 L 628
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 108/224 (48%), Gaps = 12/224 (5%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQVH QL+ + + ++A+ ++++Y + G L A+ VF P ++WNS++
Sbjct: 358 KQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPL---KDVVMWNSMITGY 414
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS-FGQIVHNHVLQMG 166
+GL E AL ++ M GV D TF V+ AC + G + F + + ++ G
Sbjct: 415 SQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPG 474
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELF 225
+ +V+ L+G + Q++++ KL +K+ ++ + I W + + D A
Sbjct: 475 IEHYACLVD-LLG---RADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAV 530
Query: 226 KRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGI 268
++ L LEP LLS+ +A GR + L + ++ R +
Sbjct: 531 EK--LAQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSV 572
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 355 bits (911), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 188/566 (33%), Positives = 315/566 (55%), Gaps = 31/566 (5%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N L+ +YAK G +SD+ LFDK+ ++ SWN M S ++ + + + +F +M +
Sbjct: 62 NRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVH--- 118
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
+ V++ ++++ + G + ++ F M++ G E VL C+ L GK I
Sbjct: 119 -DAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQI 177
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
HG ++ + VFV NAL +Y K G + A+ LF + KN+VSWN++I+ Y + G
Sbjct: 178 HGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQP 237
Query: 355 DEAVEVFSQLEK----------------------LDGG-----SMERPNVISWSAVIGAF 387
+ ++F +++ +D ++ + + W+ ++
Sbjct: 238 ETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGC 297
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
A NG+ E+AL LFR+M L V ++ TIS ++S CA A+L G+ +HG V ++ ++
Sbjct: 298 AQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDL 357
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
LV + L++MY KCG + +VF+++ +++I+WNSMI GY NG ALA +EEM+
Sbjct: 358 LVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHE 417
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
KPD + FV VLSAC HAGLV G+ F + + + P +HY+CM++LLGRAG + +
Sbjct: 418 NLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDK 477
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A D++K+M EPN +W TLL+ CR++ + + E A +F L G Y++LSNIYAA
Sbjct: 478 AVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAA 537
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
GRW+D A VR K +KK A SWIE+ ++H F + + S+ + + E L L +
Sbjct: 538 CGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKK 597
Query: 688 MENKGCVPDNDIILWEMMGKKNVKRI 713
++ G PD +++L +++ ++ I
Sbjct: 598 LQESGFTPDTNLVLHDVVEEEKFDSI 623
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 178/333 (53%), Gaps = 19/333 (5%)
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
F++N L+ +Y K G++ A++LF ++ +++ SWNA++++Y+++G ++ VF Q+
Sbjct: 58 TFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSV 117
Query: 367 LDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
D +S++ VI F+ NG +AL+ F +MQ + T +L C++
Sbjct: 118 HDA--------VSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLL 169
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
+ G++IHG +V S+ +++ V N L NMY KCG L++ +F+++ K++++WNSMIS
Sbjct: 170 DIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMIS 229
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
GY NG E F EM +G PD V +LSA G ++E + F RE + E
Sbjct: 230 GYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTF----REIK-E 284
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTLLNSCRMHKNTDVAEAM 603
+ M+ + G ++A + + M +E P+ + ++++SC + +A+
Sbjct: 285 KDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAV 344
Query: 604 ASQ--IFGLITETTGSYMLLSNIYAASGRWEDA 634
+ IFG+ + S L+ ++Y+ G DA
Sbjct: 345 HGKAVIFGVDHDLLVSSALV-DMYSKCGETADA 376
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/492 (25%), Positives = 213/492 (43%), Gaps = 99/492 (20%)
Query: 61 ASAFLAARVLSIYARFGRLFDARNVFET--------------------------APFDCK 94
FL R+L +YA+ G L DAR++F+ A FD
Sbjct: 56 TDTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQM 115
Query: 95 S--SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
S ++ +N+++ NG AL+ +V+M++ G +T V+ AC + +
Sbjct: 116 SVHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKR-- 173
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H ++ +V + N L MYAK G + + LFD++ KN +SWN M SG+
Sbjct: 174 --GKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGY 231
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG----- 267
N + +LF M+ GL P+ VT +++LS++ +CG ++E F ++++
Sbjct: 232 LQNGQPETCTKLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWT 291
Query: 268 ------IEVGAE--------------------AIAVVLSVCADLAADHMGKVIHGFVIKG 301
+ G E I+ V+S CA LA+ G+ +HG +
Sbjct: 292 TMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIF 351
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
G + + V +AL+ +Y K G+ A +F + +N++SWN++I YA+ G EA+ ++
Sbjct: 352 GVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALY 411
Query: 362 SQL--EKLD---------------GGSMER---------------PNVISWSAVIGAFAS 389
++ E L G +ER P +S +I
Sbjct: 412 EEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGR 471
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
G ++A+DL + M N + S LLSVC + +N G H+ + + N
Sbjct: 472 AGYMDKAVDLIKSMTFE---PNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPH-NAGP 527
Query: 450 QNGLLNMYMKCG 461
L N+Y CG
Sbjct: 528 YIMLSNIYAACG 539
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 185/420 (44%), Gaps = 43/420 (10%)
Query: 67 ARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL 126
+ +LS Y + G + +A F + + W +++ NG E+AL L+ +M
Sbjct: 260 SNILSAYFQCGYIDEACKTFREIK---EKDKVCWTTMMVGCAQNGKEEDALLLFREMLLE 316
Query: 127 GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ 186
V D FT V+ +C + S GQ VH + G ++ + + L+ MY+K G+
Sbjct: 317 NVRPDNFTISSVVSSCARLASL----CQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGE 372
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
+D++ +F ++ +N ISWN M G+A N AL L++ M E L+P+ +T+ +LS+
Sbjct: 373 TADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSA 432
Query: 247 HARCGRLEETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
G +E F + K G+ + + ++++ A +M K + + FE
Sbjct: 433 CMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLG--RAGYMDKAV-DLIKSMTFEP 489
Query: 306 YVFVKNALICVYGKHGDVK----VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
+ + L+ V + DV A++LF E++ N + L YA G + V
Sbjct: 490 NCLIWSTLLSVCRINCDVNNGEMAARHLF-ELDPHNAGPYIMLSNIYAACGRWKDVAAVR 548
Query: 362 SQLEKLDGGSMERPNVISWSAV---IGAFASNGRG--------EEALDLFRKMQLAK--- 407
S ++ +++ SW + + F + R EE L +K+Q +
Sbjct: 549 SLMK---NNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTP 605
Query: 408 ----VVANSVTISGLLSVCAESAALNIG----REIHGHVVRVSMNKNILVQNGLLNMYMK 459
V+ + V S+C S L + ++ HG + + KNI V G +++MK
Sbjct: 606 DTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGR-TPIRIMKNIRV-CGDCHVFMK 663
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 102/227 (44%), Gaps = 12/227 (5%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
Q + VH + ++ G + +++ ++ +Y++ G DA VF+ + + WNS++
Sbjct: 340 QGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRM---LTRNVISWNSMIL 396
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRFSFGQIVHNHVLQ 164
NG AL LY +M + D TF V+ AC G R + F I H +
Sbjct: 397 GYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMN 456
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALE 223
F ++N L+G + G M + L + + N + W+ + S +N D + E
Sbjct: 457 PTFDHYSCMIN-LLG---RAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNG-E 511
Query: 224 LFKRMELEGLEP-NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+ R E L+P N + L + +A CGR ++ + +M+ I+
Sbjct: 512 MAARHLFE-LDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIK 557
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 355 bits (910), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 208/663 (31%), Positives = 356/663 (53%), Gaps = 63/663 (9%)
Query: 10 HQFSP--SNPSRPFSIITY--NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFL 65
H FS SNP+ + TY +N LL LL+ CK+ QLKQ+ Q+I+TG F
Sbjct: 32 HSFSTHKSNPTSWNTTHTYVLSNPLLS----LLENCKSFSQLKQIQAQMILTGLILDGFA 87
Query: 66 AARVLSIYARFGRLFDARNVFETAPF--DCKSSSLL-WNSILRVNVSNGLYENALKLYVK 122
++R++S F + ++RN+ + ++ ++ WN+++R V + + L LY +
Sbjct: 88 SSRLIS----FCAISESRNLDYCIKILNNLQNPNVFSWNAVIRGCVESENPQKGLVLYKR 143
Query: 123 M-RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
M + G D +T+ + + C + F + VL+MGF ++++ N +I M
Sbjct: 144 MLTRAGCRPDNYTYSFLFKVCANLVLSYMGFE----ILGQVLKMGFDKDMYLYNGIIHML 199
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
+G+ + K+FD EG + V+W
Sbjct: 200 VSVGESGLAHKVFD-----------------------------------EGCVRDLVSWN 224
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
SL++ + R + E M ++ M ++ + V+S CA L + +G+ IH ++ +
Sbjct: 225 SLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEES 284
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
G + + NAL+ +Y K GD++ + LF + +K +VSW +I YA+ GL D A ++F
Sbjct: 285 GLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLF 344
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
M NV++W+A+IG+ EAL+LFR+MQ + + + VT+ LS
Sbjct: 345 HD--------MPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSA 396
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
C++ AL+ G H ++ + +++ ++ + L++MY KCG + + VF ++ +++ +TW
Sbjct: 397 CSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTW 456
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
++I G + G +A+ F +MI++G PD + F+ VL+AC H GLV EGR+ FD M
Sbjct: 457 TAIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKS 516
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
F + PQ +HY+CMV+LLGRAGLL+EA +++K MPME +A VWG L +C +H+N + E
Sbjct: 517 RFNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGE 576
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI 661
AS++ L +G Y+LL+N+Y +G+WE+A +R +G++K G S IEV I
Sbjct: 577 RAASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSIEVNGII 636
Query: 662 HMF 664
+ F
Sbjct: 637 NEF 639
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 355 bits (910), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 224/738 (30%), Positives = 366/738 (49%), Gaps = 105/738 (14%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
N+ LD F ++ +I L Q H Q+I+ G L ++ + G ++ AR++F
Sbjct: 20 KNTYLDFF----KRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIF 75
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL-GDGFTFPLVIRACKFM 145
+ + L+N ++R N ++L ++ +RK L + T+ I A
Sbjct: 76 LSVQ---RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGF 132
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
R G+++H + G + + + ++ MY K ++ D+ K+FD++ K+ I W
Sbjct: 133 RDDRA----GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
N M SG+ N ++++F+ + E C RL+ T L D
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINES-----------------CTRLD-TTTLLD---- 226
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
+L A+L +G IH K G + +V I +Y K G +K+
Sbjct: 227 ------------ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKM 274
Query: 326 AQNLFSEIEEKNIVSWNALI---TS----------------------------------- 347
LF E + +IV++NA+I TS
Sbjct: 275 GSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH 334
Query: 348 ----YAEAGLCDEA------------VEVFSQLEKLDGGSM---ERP--NVISWSAVIGA 386
YA G C ++ V+S+L +++ E P ++ SW+A+I
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
+ NG E+A+ LFR+MQ ++ N VTI+ +LS CA+ AL++G+ +H V +
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
I V L+ MY KCG + E +F+ + KK+ +TWN+MISGYG++G G+ AL F EM+
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
+G P V F+ VL ACSHAGLV EG IF+ M+ + EP ++HYACMVD+LGRAG LQ
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
A ++ M +EP + VW TLL +CR+HK+T++A ++ ++F L + G ++LLSNI++
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634
Query: 627 ASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELAL 686
A + AA VR +AK + L K G + IE+ H+F+SG+ +K + E LE+L
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEG 694
Query: 687 QMENKGCVPDNDIILWEM 704
+M G P+ ++ L ++
Sbjct: 695 KMREAGYQPETELALHDV 712
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 355 bits (910), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 197/617 (31%), Positives = 342/617 (55%), Gaps = 63/617 (10%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARF-GRLFDARNVFET--APFDCKSSSLLWNSI 103
+K++H IV+G + ++VL YA L A VF+ AP ++ LWN +
Sbjct: 4 IKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAP-----TTFLWNIL 58
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
+R + +A+ Y K + G++ D TFP +++AC + + + G+ +HNH+
Sbjct: 59 IRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINAL----NEGEQMHNHIT 114
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
++G ++ + N LI +YA G + + +FD++ VK+ +SWN
Sbjct: 115 KLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWN----------------- 157
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
SL+ +++C R ++ + LF +M+ G++ + V+S C
Sbjct: 158 ------------------SLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACT 199
Query: 284 DLA----ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
L AD+M + I + I E V++ N L+ +G+ G ++ A+ +F ++ +NIV
Sbjct: 200 RLGDYSMADYMVRYIEDYCI----EVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIV 255
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
+ NA+I +YA+ A ++F Q+ K D +ISWS++I ++ +AL++
Sbjct: 256 TMNAMIAAYAKGQDIVSARKIFDQIPKKD--------LISWSSMISGYSQANHFSDALEI 307
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
FR+MQ AKV +++ I+ ++S CA AL++G+ +H +V R ++ + +++N L++MYMK
Sbjct: 308 FRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMK 367
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
CG +E VF+++++KD ++WNS+I G NG + +L F+ M+ GF+P+GV F+ V
Sbjct: 368 CGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGV 427
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
L AC++A LV EG F+ M R + +EPQM+HY C+VDLLGRAG L++A + MP++P
Sbjct: 428 LIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDP 487
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRI 639
+ VW LL SC H + +AE + ++ L +G+Y LLSN YA++ RW +A VR
Sbjct: 488 DPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQ 547
Query: 640 SAKTKGLKKVAGQSWIE 656
++K G S +E
Sbjct: 548 CMADTDVRKSPGCSAVE 564
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 196/374 (52%), Gaps = 18/374 (4%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C I+ L +Q+HN + G + F++ ++ +YA G L AR+VF+
Sbjct: 90 FPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMV 149
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ WNS++ +++ L L+ M+ GV D T V+ AC +G +
Sbjct: 150 V---KDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSM 206
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+ + ++ +++ +V++ N L+ + + GQ+ + K+F ++V+N ++ N M +
Sbjct: 207 ADYMVRYIEDYCIEV----DVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIA 262
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
+A D A ++F ++ + + ++W+S++S +++ + +++F M++ ++
Sbjct: 263 AYAKGQDIVSARKIFDQIP----KKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKP 318
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
A IA V+S CA L A +GK +H +V + + ++N+LI +Y K G K A +F
Sbjct: 319 DAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVF 378
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
E++EK+ +SWN++I A G E++ +F + L G RPN +++ V+ A A+
Sbjct: 379 KEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAM--LTEGF--RPNGVTFLGVLIACANA 434
Query: 391 GRGEEALDLFRKMQ 404
EE LD F M+
Sbjct: 435 KLVEEGLDHFESMK 448
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 355 bits (910), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 211/649 (32%), Positives = 348/649 (53%), Gaps = 64/649 (9%)
Query: 111 GLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN 170
G ENA++L +K + + T+ V++ C + S + G+ VH+ + +
Sbjct: 80 GDLENAMELVCMCQKSEL--ETKTYGSVLQLCAGLKSL----TDGKKVHSIIKSNSVGVD 133
Query: 171 VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
+ +L+ YA G + + ++FD + KN WN M S +A D ++ LFK M
Sbjct: 134 EALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVE 193
Query: 231 EGLE----------------PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
+G+E + ++W S++S + G E + ++ M GI+V
Sbjct: 194 KGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLAT 253
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
I VL CA+ +GK +H IK FE + N L+ +Y K GD+ A +F ++
Sbjct: 254 IISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 313
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEK----LD-------------GGSMER--- 374
E+N+VSW ++I Y G D A+ + Q+EK LD GS++
Sbjct: 314 ERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKD 373
Query: 375 -----------PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA----------NSV 413
N+ +A++ +A G E A +F M + +++ +S
Sbjct: 374 VHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSR 433
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
T++ +L CA +AL G+EIHG+++R + + V N L+++Y+KCG L L+F+ I
Sbjct: 434 TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
KDL++W MI+GYGM+G G A+ATF EM +AG +PD V+F+++L ACSH+GL+ +G
Sbjct: 494 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRM 593
R F +M +F IEP++EHYACMVDLL R G L +A ++ +P+ P+A +WG LL CR+
Sbjct: 554 RFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRI 613
Query: 594 HKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
+ + ++AE +A ++F L E TG Y+LL+NIYA + + E+ ++R KGL+K G S
Sbjct: 614 YHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCS 673
Query: 654 WIEVKRKIHMFSSG-NSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
WIE+K ++++F SG NS K + +L+++ +M+ +G P L
Sbjct: 674 WIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYAL 722
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 204/467 (43%), Gaps = 104/467 (22%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ +LQ C K++ K+VH+ + L +++S YA G L + R VF+T
Sbjct: 102 YGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTME 161
Query: 91 ----------------------------------------------FD--CKSSSLLWNS 102
FD C + WNS
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNS 221
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
++ VSNGL E L +Y +M LG+ D T V+ C G+ S G+ VH+
Sbjct: 222 MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGT----LSLGKAVHSLA 277
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
++ F+ ++ N L+ MY+K G + + ++F+K+ +N +SW M +G+ + DGA+
Sbjct: 278 IKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAI 337
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD-------------------LFDMM 263
L ++ME EG++ + V TS+L + AR G L+ D L DM
Sbjct: 338 ILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMY 397
Query: 264 RKRGIEVGAEAI--------------------------AVVLSVCADLAADHMGKVIHGF 297
K G GA ++ A +L CA L+A GK IHG+
Sbjct: 398 AKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGY 457
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
+++ G+ V NAL+ +Y K G + +A+ LF I K++VSW +I Y G +EA
Sbjct: 458 ILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEA 517
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+ F+++ D G P+ +S+ +++ A + +G E+ F M+
Sbjct: 518 IATFNEMR--DAGI--EPDEVSFISILYACSHSGLLEQGWRFFYIMK 560
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 158/355 (44%), Gaps = 40/355 (11%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
H + ++ K VH+ + ++ F+ ++ +YA+ G + A +VF T
Sbjct: 360 HACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVV---K 416
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ WN+++ LK D T ++ AC + + G
Sbjct: 417 DIISWNTMV----------GELK-----------PDSRTMACILPACASLSALE----RG 451
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ +H ++L+ G+ + H+ N L+ +Y K G + + LFD + K+ +SW +M +G+ ++
Sbjct: 452 KEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMH 511
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEA 274
+ A+ F M G+EP+ V++ S+L + + G LE+ F +M+ IE E
Sbjct: 512 GYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEH 571
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV----KVAQNLF 330
A ++ + + ++ K + F+ + AL+C + D+ KVA+ +F
Sbjct: 572 YACMVDLLSRTG--NLSKA-YKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVF 628
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
E+E +N + L YAEA ++ EV EK+ + + SW + G
Sbjct: 629 -ELEPENTGYYVLLANIYAEA---EKREEVKRMREKIGKKGLRKNPGCSWIEIKG 679
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 354 bits (909), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 186/580 (32%), Positives = 326/580 (56%), Gaps = 24/580 (4%)
Query: 118 KLYVKMRKLGVLG-DGFTFP-----LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ-GN 170
+L+ + LG+L +G P +++ C S + G+ VH H+ G + N
Sbjct: 30 QLFQAISSLGLLSRNGIRLPSKTLAYLLQQCANTKSLKL----GKWVHLHLKVTGLKRPN 85
Query: 171 VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
+ N LI MY+K G ++K+FD++ +N SWN M SG+A A +LF +M
Sbjct: 86 TFLANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMP- 144
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
E + V+W +++ ++A+ G + + + +R+ GI + A +L++C + +
Sbjct: 145 ---EKDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELEL 201
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
K HG V+ GF + + ++++ Y K ++ A+ LF E+ +++++W +++ YA+
Sbjct: 202 SKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQ 261
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
G + A E+F M N ++W+++I +A + G +AL+LF KM +
Sbjct: 262 WGDVEAARELFDL--------MPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRP 313
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
+ T S L A A+LN G++IHG+++R ++ N +V + L++MY KCGCLE G LVF
Sbjct: 314 DQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVF 373
Query: 471 EQI-EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
+ + +K D++ WN++IS +G G+ A+ F++M+ G KPD + + +L+ACSH+GLV
Sbjct: 374 DLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLV 433
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
EG R+++ + + P EHYAC++DLLGRAG + ++ MP +PN +W LL
Sbjct: 434 QEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKPNDEIWNALLG 493
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
CRMH N + +A +I L +++ +Y+LLS+I+AA GRWE VR + ++K
Sbjct: 494 VCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVENVRQLMNERHVRKD 553
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
SWIE++ K+H F++ + L + + L++LA ME
Sbjct: 554 RAISWIEIENKVHSFTASDRLHPLKEVIYLALKQLAGHME 593
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 225/479 (46%), Gaps = 55/479 (11%)
Query: 36 HLLQQCKTIHQLK---QVHNQLIVTG-ANASAFLAARV---------------------- 69
+LLQQC LK VH L VTG + FLA +
Sbjct: 55 YLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYKVFDEMST 114
Query: 70 ---------LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY 120
LS YA+ G++ AR +F+ P + + WN+++ +G +AL+ Y
Sbjct: 115 RNLYSWNGMLSGYAKLGKIKPARKLFDKMP---EKDVVSWNTMVIAYAKSGFCNDALRFY 171
Query: 121 VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
++R+LG+ + ++F ++ C + + H VL GF N+ I + ++
Sbjct: 172 RELRRLGIGYNEYSFAGLLNICVKVK----ELELSKQAHGQVLVAGFLSNLVISSSVLDA 227
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
YAK +M D+ +LFD++ +++ ++W M SG+A D + A ELF M E N V W
Sbjct: 228 YAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMP----EKNPVAW 283
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
TSL++ +AR + ++LF M I + L A +A+ + GK IHG++I+
Sbjct: 284 TSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIR 343
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK-NIVSWNALITSYAEAGLCDEAVE 359
V ++LI +Y K G ++V + +F + +K ++V WN +I+S A+ G EA++
Sbjct: 344 TNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQ 403
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK-VVANSVTISGL 418
+F + +L +P+ I+ ++ A + +G +E L L+ + V+ N + L
Sbjct: 404 MFDDMVRLG----MKPDRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACL 459
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
+ + + + + + ++ N + N LL + G +E G V E+I + D
Sbjct: 460 IDLLGRAGHFDT---LMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELD 515
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 13/225 (5%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H LI T + + + ++ +Y++ G L R VF+ K +LWN+I+
Sbjct: 335 KQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDL--MGDKWDVVLWNTIISSL 392
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR--FRFSFGQIVHNHVLQM 165
+G + A++++ M +LG+ D T +++ AC G + R + I H
Sbjct: 393 AQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRL-YESITSCH---- 447
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALEL 224
G N LI + + G +K+ K N WN + ++ + + E+
Sbjct: 448 GVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREV 507
Query: 225 FKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGI 268
+++ +E L+P LLSS HA GR E ++ +M +R +
Sbjct: 508 AEKI-IE-LDPQSSAAYVLLSSIHAAVGRWELVENVRQLMNERHV 550
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 228/731 (31%), Positives = 372/731 (50%), Gaps = 62/731 (8%)
Query: 12 FSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLS 71
F N S TY N +L C + +++ K++H+ ++ + L +L+
Sbjct: 69 FHLKNSSIQLEPSTYVNLILACTN-----VRSLKYGKRIHDHILKSNCQPDLVLQNHILN 123
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+Y + G L DAR F+T S + W ++ NG +A+ +Y++M + G D
Sbjct: 124 MYGKCGSLKDARKAFDTMQL---RSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPD 180
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
TF +I+AC G G +H HV++ G+ ++ N LI MY K GQ++ +
Sbjct: 181 QLTFGSIIKACCIAGDI----DLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHAS 236
Query: 192 KLFDKVRVKNYISWNMMFSGFA-LNFDCDGALELFKRMELEGL-EPNFVTWTSLLSS--- 246
+F + K+ ISW M +GF L ++ + AL LF+ M +G+ +PN + S+ S+
Sbjct: 237 DVFTMISTKDLISWASMITGFTQLGYEIE-ALYLFRDMFRQGVYQPNEFIFGSVFSACRS 295
Query: 247 ----------HARCGRLEETMDLF------DMMRKRGI---------EVGAEAIAVVLSV 281
C + ++F DM K G ++ + + ++
Sbjct: 296 LLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAI 355
Query: 282 CADLAADHMGKVIHGF--VIKGGF--EDYVFVKNALICVYGKHGDVKVAQNLFSEI---- 333
A LA + + I+ F +I G +D F+ L+C G + + S I
Sbjct: 356 IAALANSDVNEAIYFFCQMIHMGLMPDDITFLN--LLCACGSPMTLNQGMQIHSYIIKMG 413
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
+K N+L+T Y + +A VF + E N++SW+A++ A + + +
Sbjct: 414 LDKVAAVCNSLLTMYTKCSNLHDAFNVFKDIS-------ENGNLVSWNAILSACSQHKQP 466
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
EA LF+ M ++ +++TI+ +L CAE +L +G ++H V+ + ++ V N L
Sbjct: 467 GEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRL 526
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY KCG L+ VF+ + D+++W+S+I GY GLG+ AL F M G +P+
Sbjct: 527 IDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNE 586
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
V ++ VLSACSH GLV EG +++ M E I P EH +CMVDLL RAG L EA + +K
Sbjct: 587 VTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIK 646
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
+P+ +W TLL SC+ H N D+AE A I L + + +LLSNI+A++G W++
Sbjct: 647 KTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIHASAGNWKE 706
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
A++R K G++KV GQSWIEVK +IH+F S +S N+ +LE+L LQM + G
Sbjct: 707 VARLRNLMKQMGVQKVPGQSWIEVKDQIHVFFSEDSSHPQRGNIYTMLEDLWLQMLDDGY 766
Query: 694 VPDN--DIILW 702
P DI +W
Sbjct: 767 DPCQRLDISIW 777
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/496 (22%), Positives = 221/496 (44%), Gaps = 80/496 (16%)
Query: 101 NSILRVNVSNGLYENALKLY-VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
NS + + Y AL + ++ + + T+ +I AC + S ++ G+ +H
Sbjct: 48 NSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKY----GKRIH 103
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+H+L+ Q ++ + N ++ MY K G + D+ K FD +++++ +SW +M SG++ N +
Sbjct: 104 DHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQEN 163
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
A+ ++ +M G P+ +T+ S++ + G ++
Sbjct: 164 DAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDID------------------------- 198
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
+G +HG VIK G++ ++ +NALI +Y K G + A ++F+ I K+++
Sbjct: 199 ----------LGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLI 248
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
SW ++IT + + G EA+ +F D+
Sbjct: 249 SWASMITGFTQLGYEIEALYLFR-----------------------------------DM 273
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
FR+ N + S C GR+I G + + +N+ L +MY K
Sbjct: 274 FRQ---GVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAK 330
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
G L F QIE DL++WN++I+ + + E A+ F +MI G PD + F+ +
Sbjct: 331 FGFLPSAKRAFYQIESPDLVSWNAIIAALANSDVNE-AIYFFCQMIHMGLMPDDITFLNL 389
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
L AC +N+G +I +++ ++ ++ + + L +A ++ K++
Sbjct: 390 LCACGSPMTLNQGMQIHSYIIK-MGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENG 448
Query: 580 NAYVWGTLLNSCRMHK 595
N W +L++C HK
Sbjct: 449 NLVSWNAILSACSQHK 464
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 119/250 (47%), Gaps = 35/250 (14%)
Query: 378 ISWSAVIGAFASNGRGEEALDLFR-KMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
+S ++ I EALD F ++ + + T L+ C +L G+ IH
Sbjct: 45 LSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHD 104
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
H+++ + ++++QN +LNMY KCG L++ F+ ++ + +++W MISGY NG +
Sbjct: 105 HILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQEND 164
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-------------- 542
A+ + +M+ +G+ PD + F +++ AC AG ++ G ++ +++
Sbjct: 165 AIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALIS 224
Query: 543 -FRIEPQMEHYACMVDLLGRAGLLQEAS-------------------DIVKNMPMEPNAY 582
+ Q+ H + + ++ L+ AS D+ + +PN +
Sbjct: 225 MYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEF 284
Query: 583 VWGTLLNSCR 592
++G++ ++CR
Sbjct: 285 IFGSVFSACR 294
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 227/669 (33%), Positives = 343/669 (51%), Gaps = 57/669 (8%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L +LS+ RFG + A VF P + WN ++ G E AL LY +M
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMP---ERDVFSWNVMVGGYGKAGFLEEALDLYHRML 187
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
G D +TFP V+R+C + + G+ VH HVL+ G V ++N L+ MYAK
Sbjct: 188 WAGARPDVYTFPCVLRSCGGVPDL----TMGREVHAHVLRFGLGVEVDVLNALVTMYAKC 243
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G + + K+FD + + + ISWN M +G N +C+ LELF M + +EPN +T TS+
Sbjct: 244 GDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVT 303
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK------------ 292
+ L+ ++ + KRG ++ + + L MG+
Sbjct: 304 VASGLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLG--RMGEACTVFSRMETRD 361
Query: 293 ------VIHGFVIKGGFEDYVFVKNALICVYGKHGD--------------------VKVA 326
+I G+ K GF D AL+ V D +K+
Sbjct: 362 AMSWTAMISGYE-KNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLH 420
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+ S+ + IV NAL+ YA++ + ++A+EVF + D VISWS++I
Sbjct: 421 ELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKD--------VISWSSMIAG 472
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
F N + EAL FR M LA V NSVT L+ CA + +L G+EIH HV+R +
Sbjct: 473 FCFNHKNFEALYYFRHM-LADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASE 531
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
V N LL++Y+KCG F KD+++WN M++G+ +G G+ AL+ F EM+E
Sbjct: 532 GYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLE 591
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
G PD V FVA+L CS AG+V++G +F M ++ I P ++HYACMVDLL R G L
Sbjct: 592 TGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLT 651
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
E + + MP+ P+A VWG LLN CR+H+N ++ E A + L G ++LLS++YA
Sbjct: 652 EGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYA 711
Query: 627 ASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELAL 686
+G W + +KVR + + KGL+ G SW+EVK IH F + + +K + +VL+ +
Sbjct: 712 DAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYE 771
Query: 687 QMENKGCVP 695
+M+ G P
Sbjct: 772 RMKASGFAP 780
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 4/216 (1%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
L +C A G GH + + N +L+M ++ G VF ++ ++D
Sbjct: 100 LFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAWKVFAKMPERD 159
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+ +WN M+ GYG G E AL + M+ AG +PD F VL +C + GR +
Sbjct: 160 VFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHA 219
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNT 597
++R F + +++ +V + + G ++ A + M + + W ++ +N
Sbjct: 220 HVLR-FGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLT-DCISWNAMIAG--HFENH 275
Query: 598 DVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
+ + + L E + M ++++ ASG D
Sbjct: 276 ECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSD 311
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 214/704 (30%), Positives = 363/704 (51%), Gaps = 75/704 (10%)
Query: 34 FDHLLQ-QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
F HL Q + IH HN + N L A + F + NVF
Sbjct: 14 FSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNP-NVF------ 66
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
++ S+LR + + ++ M+ GV D F +P++I++ G F
Sbjct: 67 ------VFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAG-NGGIGF-- 117
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR-------------- 198
H HVL++G + + N +I MYA++G + + K+FD++
Sbjct: 118 ------HAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVS 171
Query: 199 -------------------VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
+N I+W M +G+A D + A F M E + V+
Sbjct: 172 GYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMP----ERSVVS 227
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
W ++LS +A+ G EE + LFD M GIE V+S C+ + + +
Sbjct: 228 WNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLH 287
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI-EEKNIVSWNALITSYAEAGLCDEAV 358
+ + FV+ AL+ +Y K G + A+ +F E+ +N V+WNA+I++Y G D A
Sbjct: 288 QKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSAR 347
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK-VVANSVTISG 417
E+F+ +M NV++W+++I +A NG+ A++LF++M AK + + VT+
Sbjct: 348 ELFN--------TMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVS 399
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
++S C AL +G + + + +I N ++ MY +CG +E+ VF+++ +D
Sbjct: 400 VISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRD 459
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
++++N++ISG+ +G G A+ M E G +PD V F+ VL+ACSHAGL+ EGR++F+
Sbjct: 460 VVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFE 519
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNT 597
+ +P ++HYACMVDLLGR G L++A ++ MPMEP+A V+G+LLN+ R+HK
Sbjct: 520 SIK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQV 574
Query: 598 DVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
++ E A+++F L + +G+++LLSNIYA++GRW+D ++R + K G+KK G SW+E
Sbjct: 575 ELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEY 634
Query: 658 KRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
K+H F + ++ ++L EL +M G + D +L
Sbjct: 635 GGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVL 678
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 318/574 (55%), Gaps = 47/574 (8%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N+L+ +YAK G++ D+ LFDK+ ++ SWN + S +A + F RM
Sbjct: 62 NQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFR--- 118
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
+ V++ + ++ + +E+++LF M++ G E I +L+ A L GK I
Sbjct: 119 -DSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQI 177
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA----- 349
HG +I F VF+ NAL +Y K G+++ A+ LF + +KN+VSWN +I+ YA
Sbjct: 178 HGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQP 237
Query: 350 ------------------------------EAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
+ G DEA VFS+ ++ D ++
Sbjct: 238 EKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKD--------IVC 289
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVV 439
W+A++ +A NGR E+AL LF +M L + +S T+S ++S CA+ A+L+ G+ +HG +
Sbjct: 290 WTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSI 349
Query: 440 RVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
+N N+LV + L++MY KCG +++ VF + +++++WN+MI G NG ++AL
Sbjct: 350 LAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALE 409
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
FE M++ FKPD V F+ +LSAC H + +G+ FD + + + P ++HYACMV+LL
Sbjct: 410 LFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLL 469
Query: 560 GRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYM 619
GR G +++A ++KNM +P+ +W TLL+ C + AE A +F L Y+
Sbjct: 470 GRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYI 529
Query: 620 LLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCE 679
+LSN+YA+ GRW+D A VR K+K +KK AG SWIE+ ++H F+S + + +++ E
Sbjct: 530 MLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYE 589
Query: 680 VLEELALQMENKGCVPDNDIILWEMMGKKNVKRI 713
L L +++ +G P+ +++L ++ + K I
Sbjct: 590 KLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSI 623
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 136/549 (24%), Positives = 228/549 (41%), Gaps = 155/549 (28%)
Query: 61 ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYEN----- 115
+FL ++L +YA+FG+L DA+N+F+ K WN++L +G +N
Sbjct: 56 TDSFLHNQLLHLYAKFGKLRDAQNLFDKM---LKRDXFSWNALLSAYAKSGSIQNLKATF 112
Query: 116 --------------------------ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
+L+L+ +M++ G +T ++ A + R
Sbjct: 113 DRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLR 172
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
+ G+ +H ++ F GNV I N L MYAK G++ + LFD + KN +SWN+M
Sbjct: 173 Y----GKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMI 228
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVT------------------------------ 239
SG+A N + + L +M L G P+ VT
Sbjct: 229 SGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIV 288
Query: 240 -WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
WT+++ +A+ GR E+ + LF+ M IE + ++ V+S CA LA+ H G+ +HG
Sbjct: 289 CWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKS 348
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
I G + + V +ALI +Y K G + A+++F+ + +N+VSWNA+I A+ G
Sbjct: 349 ILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNG------ 402
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
++AL+LF M K ++VT G+
Sbjct: 403 ---------------------------------HDKDALELFENMLQQKFKPDNVTFIGI 429
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
LS C + C +E+G F+ I +
Sbjct: 430 LSAC-----------------------------------LHCNWIEQGQEYFDSISNQHG 454
Query: 479 IT-----WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG-LVN-- 530
+T + M++ G G E A+A + M PD + + +LS CS G +VN
Sbjct: 455 MTPTLDHYACMVNLLGRTGRIEQAVALIKNM---AHDPDFLIWSTLLSICSTKGDIVNAE 511
Query: 531 -EGRRIFDM 538
R +F++
Sbjct: 512 VAARHLFEL 520
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 155/287 (54%), Gaps = 16/287 (5%)
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
F+ N L+ +Y K G ++ AQNLF ++ +++ SWNAL+++YA++G F ++
Sbjct: 59 FLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFR 118
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
D +S++ I F+ N +E+L+LF++MQ TI +L+ A+
Sbjct: 119 DS--------VSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLD 170
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L G++IHG ++ + N+ + N L +MY KCG +E+ +F+ + KK+L++WN MISG
Sbjct: 171 LRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISG 230
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
Y NG E + +M +G PD V +++A G V+E RR+F EF+ E
Sbjct: 231 YAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFS----EFK-EK 285
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNM---PMEPNAYVWGTLLNSC 591
+ + M+ + G ++A + M +EP++Y ++++SC
Sbjct: 286 DIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSC 332
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 163/361 (45%), Gaps = 19/361 (5%)
Query: 52 NQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNG 111
+Q+ ++G + +++ Y + GR+ +AR VF + + W +++ NG
Sbjct: 245 HQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVFSEFK---EKDIVCWTAMMVGYAKNG 301
Query: 112 LYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNV 171
E+AL L+ +M + D +T V+ +C + S GQ VH + G N+
Sbjct: 302 REEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHH----GQAVHGKSILAGLNNNL 357
Query: 172 HIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELE 231
+ + LI MY+K G + D+ +F+ + +N +SWN M G A N ALELF+ M +
Sbjct: 358 LVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQ 417
Query: 232 GLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHM 290
+P+ VT+ +LS+ C +E+ + FD + + G+ + A ++++
Sbjct: 418 KFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLG-----RT 472
Query: 291 GKVIHGF-VIKGGFEDYVF-VKNALICVYGKHGDV---KVAQNLFSEIEEKNIVSWNALI 345
G++ +IK D F + + L+ + GD+ +VA E++ V + L
Sbjct: 473 GRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLS 532
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE-EALDLFRKMQ 404
YA G + V + ++ + + I + F S R E+ D++ K+
Sbjct: 533 NMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLN 592
Query: 405 L 405
+
Sbjct: 593 M 593
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 106/229 (46%), Gaps = 10/229 (4%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
++H + VH + I+ G N + +++ ++ +Y++ G + DAR+VF P + + WN+
Sbjct: 337 SLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMP---TRNVVSWNA 393
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
++ NG ++AL+L+ M + D TF ++ AC + + N
Sbjct: 394 MIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISN-- 451
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV-RVKNYISWNMMFSGFALNFDCDGA 221
Q G + ++ + + G++ + L + +++ W+ + S + D A
Sbjct: 452 -QHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNA 510
Query: 222 LELFKRMELEGLEPNF-VTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
E+ R E L+P V + L + +A GR ++ + ++M+ + ++
Sbjct: 511 -EVAARHLFE-LDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVK 557
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 209/655 (31%), Positives = 334/655 (50%), Gaps = 47/655 (7%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVL--SIYARFGRLFDARNVFETAPF 91
D L +C + L Q+H Q + +G A A+ A+R+L + A RL F
Sbjct: 7 LDAQLSRCCSARHLLQIHAQFLASGLLADAYAASRLLLFTTSATAARLLPHPLHHSLQLF 66
Query: 92 DCKSS--SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
S + N++L+ + G LY M D +T PL+ AC G R
Sbjct: 67 GLVRSPNAFTCNTLLKAALRQGFPHLCFPLYASMP---AAPDTYTHPLLAAACAARGDVR 123
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G VH+H ++ GF N+++ N L+ MY+ G ++ + ++FD V + +SWN +
Sbjct: 124 E----GLQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRVFDAGPVWDAVSWNTIL 179
Query: 210 SGFALNFDCDGALELFKRME--------------------------LEGLEP-NFVTWTS 242
+ + + D + A+++F RM +G E + TWT+
Sbjct: 180 ATYVRDGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEARGVFDGAEHRDAFTWTA 239
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
++S R E + +F MR+ G V + V++ CA G+V HG V++ G
Sbjct: 240 MVSCFERNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAKSGVIQNGEVCHGLVVRAG 299
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
V V+N LI +Y DV A+ LF E + SWN++I+ Y + G ++A +F
Sbjct: 300 LGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAKALFD 359
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
+ D +SWSA+I N + EAL++F M+ ++ + VT+ ++S C
Sbjct: 360 VMPDKDN--------VSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISAC 411
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
+ +AL G+ +H ++ + N I++ L++MYMKCGC+E VF+ +E+K WN
Sbjct: 412 SNLSALEQGKLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMLEEKGTPCWN 471
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFK-PDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
++I G MNGL +L F EM G P+ + F VLSAC H GLV EGR+ F +M
Sbjct: 472 AVIVGLAMNGLVTRSLDMFSEMEATGTAVPNEITFTGVLSACRHGGLVEEGRQFFKLMQN 531
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
+++I P + HY CMVDLLGRAG ++EA D++++MPM P+ WG LL +C H +++V E
Sbjct: 532 KYQIVPNIRHYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPAWGALLGACWKHGDSEVGE 591
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
+ ++ L + G +LSNIYA+ G W+ +R S K + + KVAG S +E
Sbjct: 592 RVGKKLVKLDPDHDGFQTMLSNIYASEGMWQCVKDLRGSMKQQHVAKVAGCSMVE 646
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 207/630 (32%), Positives = 333/630 (52%), Gaps = 57/630 (9%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVL--SIYARFGRLFDARNVFETAPFDCK 94
LL+ CK++ QLKQ+ + G +++ S+ + G A +F +
Sbjct: 14 LLKSCKSMSQLKQIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRIFN---YIHD 70
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
S ++N +++ V +G + +A+ L+ ++R+ GV D +T+P V++ +G R
Sbjct: 71 PSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIGEVRE---- 126
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ VH V++ G + + ++ N + MYA++G +
Sbjct: 127 GEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLV--------------------------- 159
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
+G ++F+ M + + V+W ++S + RC R EE +D++ M E EA
Sbjct: 160 ----EGFTQVFEEMP----DRDAVSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEA 211
Query: 275 IAV-VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
V LS CA L +GK IH + I + + NAL+ +Y K G V VA+ +F +
Sbjct: 212 TVVSTLSACAVLRNLELGKEIHDY-IASELDLTTIMGNALLDMYCKCGHVSVAREIFDAM 270
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
KN+ W +++T Y G D+A +F + D ++ W+A+I + R
Sbjct: 271 TVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRD--------IVLWTAMINGYVQFNRF 322
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
EE + LF +MQ+ V + + LL+ CA+S AL G+ IH ++ + + +V L
Sbjct: 323 EETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVVGTAL 382
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
+ MY KCGC+E+ +F +++KD +W S+I G MNG AL F+ M G KPD
Sbjct: 383 IEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAMNGKPSEALELFKAMQTCGLKPDD 442
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
+ FVAVLSACSHAGLV EGR++F M + IEP +EHY C +DLLGRAGLLQEA ++VK
Sbjct: 443 ITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFIDLLGRAGLLQEAEELVK 502
Query: 574 NMPMEPNAYV---WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
+P + N + +G LL++CR + N D+ E +A+ + + + + + LL++IYA++ R
Sbjct: 503 KLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTLLASIYASADR 562
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
WED KVR K G+KKV G S IEV K
Sbjct: 563 WEDVRKVRNKMKDLGIKKVPGYSAIEVDGK 592
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 222/492 (45%), Gaps = 78/492 (15%)
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG--MYAKMGQMSDSF 191
T+ ++++CK M + + H+ +G Q + +N+L+ M + +G + +
Sbjct: 10 TYISLLKSCKSMSQLK-------QIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYAN 62
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
++F+ + + +N+M F + A+ LF+++ G+ P+ T+ +L G
Sbjct: 63 RIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIG 122
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
+ E G+ +H FV+K G E +V N
Sbjct: 123 EVRE-----------------------------------GEKVHAFVVKTGLEFDPYVCN 147
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
+ + +Y + G V+ +F E+ +++ VSWN +I+ Y +EAV+V+ ++ S
Sbjct: 148 SFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYVRCKRFEEAVDVYRRMWT---ES 204
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV-------TISG--LLSVC 422
E+PN + + + A A + R ++L K + + + TI G LL +
Sbjct: 205 NEKPNEATVVSTLSACA----------VLRNLELGKEIHDYIASELDLTTIMGNALLDMY 254
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
+ +++ REI + KN+ ++ Y+ CG L++ +FE+ +D++ W
Sbjct: 255 CKCGHVSVAREIFDAMTV----KNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWT 310
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
+MI+GY E +A F EM G KPD V +L+ C+ +G + +G+ I + + E
Sbjct: 311 AMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWIHN-YIDE 369
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
RI+ ++++ + G ++++ +I + E + W +++ C + N +EA
Sbjct: 370 NRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLK-EKDTTSWTSII--CGLAMNGKPSEA 426
Query: 603 M----ASQIFGL 610
+ A Q GL
Sbjct: 427 LELFKAMQTCGL 438
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 93/213 (43%), Gaps = 19/213 (8%)
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC-- 460
MQ +K++ T LL C + L ++I H+ V + ++ N L+ M
Sbjct: 1 MQCSKLMKG--TYISLLKSCKSMSQL---KQIQAHIFCVGLQQDRDTLNKLMAFSMDSSL 55
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
G + +F I L +N MI + +G +A++ F+++ E G PD + VL
Sbjct: 56 GDFNYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVL 115
Query: 521 SACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHYAC--MVDLLGRAGLLQEASDIVKNMPM 577
G V EG ++ +V+ +P Y C +D+ GL++ + + + MP
Sbjct: 116 KGIGCIGEVREGEKVHAFVVKTGLEFDP----YVCNSFMDMYAELGLVEGFTQVFEEMP- 170
Query: 578 EPNAYVWGTLLNS---C-RMHKNTDVAEAMASQ 606
+ +A W +++ C R + DV M ++
Sbjct: 171 DRDAVSWNIMISGYVRCKRFEEAVDVYRRMWTE 203
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 223/678 (32%), Positives = 362/678 (53%), Gaps = 48/678 (7%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG-D 131
YAR G++ AR VF+ P + WNS++ N A L+ KM + + +
Sbjct: 26 YARIGQIESARRVFDEMP---DKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWN 82
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
G L+ K R +F + +V+ ++ Y + G +S++
Sbjct: 83 G----LISGYVKNRMVSEARKAFDTMPERNVVSW---------TAMVRGYVQEGLVSEAE 129
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
LF ++ KN +SW +M G D A LF M ++ + V T+++S + + G
Sbjct: 130 TLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVK----DVVARTNMISGYCQEG 185
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
RL E +LFD M +R + I+ + A + +V+ E
Sbjct: 186 RLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMP--------EKNEVSWT 237
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
A++ Y + G ++ A LF + K +V+ NA+I + + G +A +VF Q+ + D G+
Sbjct: 238 AMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGT 297
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
WSA+I + G EAL+LF MQ V +N ++ +LSVCA A+L+ G
Sbjct: 298 --------WSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHG 349
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
R++H +V+ + ++ V + L+ MY+KCG L + +F++ KD++ WNS+I+GY +
Sbjct: 350 RQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQH 409
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
GL E AL F EM +G DGV FV VLSACS+ G V EG IF+ M ++ +EP+ EH
Sbjct: 410 GLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEH 469
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
YACMVDLLGRAGL+ +A D+++ MP+E +A +WG LL +CR H N ++AE A ++ L
Sbjct: 470 YACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLE 529
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
+ G Y+LLSNIYA+ GRW D A++R + + K + K G SWIEV++++HMF+ G S +
Sbjct: 530 PKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTK 589
Query: 672 -SDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHRIVGF 730
+L ++ ++LE+L + G PD+ +L +V +++R+ S+ V F
Sbjct: 590 HPELSSIMKMLEKLDGMLREAGYYPDSSFVL------HDVDEEEKVRSLGHHSERLAVAF 643
Query: 731 RNLK----LGLRLLLSLR 744
LK + +R++ +LR
Sbjct: 644 GLLKVPEGMPIRVMKNLR 661
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 165/390 (42%), Gaps = 74/390 (18%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N I YA++GQ+ + ++FD++ K +SWN M +G+ N A LF +M E
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMP----E 75
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM---- 290
N V+W L+S + + + E FD M +R + + + A+ +
Sbjct: 76 RNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQM 135
Query: 291 --GKVIHGFVIKGGFE------------DYVFVKNA-----LICVYGKHGDVKVAQNLFS 331
V+ V+ GG D + VK+ +I Y + G + A+ LF
Sbjct: 136 PEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYCQEGRLAEARELFD 195
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
E+ +N++SW +I+ Y + G D A ++F M N +SW+A++ + G
Sbjct: 196 EMPRRNVISWTTMISGYVQNGQVDVARKLFE--------VMPEKNEVSWTAMLMGYTQGG 247
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
R EEA +LF M + VVA + I G QN
Sbjct: 248 RIEEASELFDAMPVKAVVACNAMILG------------------------------FGQN 277
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
G + + VF+QI +KD TW++MI Y G AL F M G +
Sbjct: 278 GE---------VAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQS 328
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
+ + ++VLS C+ ++ GR++ +V+
Sbjct: 329 NFPSLISVLSVCASLASLDHGRQVHAELVK 358
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 125/300 (41%), Gaps = 62/300 (20%)
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
+++N+ I YA G + A VF ++ D G ++SW++++ + N R EA
Sbjct: 17 IAYNSQIARYARIGQIESARRVFDEMP--DKG------IVSWNSMVAGYFQNNRPREARY 68
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
LF KM +N + NGL++ Y+
Sbjct: 69 LFDKMP---------------------------------------ERNTVSWNGLISGYV 89
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
K + E F+ + ++++++W +M+ GY GL A F +M E V++
Sbjct: 90 KNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNV----VSWTV 145
Query: 519 VLSACSHAGLVNEGRRIFDMM-VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
+L ++E R +FD+M V++ M C + G L EA ++ MP
Sbjct: 146 MLGGLIQVRRIDEARGLFDIMPVKDVVARTNMISGYC------QEGRLAEARELFDEMPR 199
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
N W T+++ + DVA + ++ E + + ML+ Y GR E+A+++
Sbjct: 200 R-NVISWTTMISGYVQNGQVDVARKLF-EVMPEKNEVSWTAMLMG--YTQGGRIEEASEL 255
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 117/238 (49%), Gaps = 15/238 (6%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET-APFD 92
+L C ++ L +QVH +L+ + ++ F+A+ ++++Y + G L AR +F+ +P D
Sbjct: 336 VLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKD 395
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
++WNSI+ +GL E AL+++ +M G+ DG TF V+ AC + G +
Sbjct: 396 I----VMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGL 451
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSG 211
+ + + L + + +L+G + G ++D+ L K+ V+ + I W +
Sbjct: 452 EIFESMKSKYLVEPKTEHYACMVDLLG---RAGLVNDAMDLIQKMPVEADAIIWGALLGA 508
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGI 268
+ + + A K+ L LEP LLS+ +A GR + +L MR + +
Sbjct: 509 CRTHMNMNLAEVAAKK--LLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKV 564
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/616 (31%), Positives = 340/616 (55%), Gaps = 61/616 (9%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC--KSSSLLWNSIL 104
+K++H IV+G + ++VL YA + VF FD ++ LWN ++
Sbjct: 469 IKRLHAYYIVSGLYNCHYAMSKVLRSYA----ILQPDLVFAHKVFDQIEAPTTFLWNILI 524
Query: 105 RVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
R + +A+ Y K + G++ D TFP +++AC + + + G+ +HNH+ +
Sbjct: 525 RGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINAL----NEGEQMHNHITK 580
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
+G ++ + N LI +YA G + + +FD++ VK+ +SWN
Sbjct: 581 LGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWN------------------ 622
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
SL+ +++C R ++ + LF +M+ G++ + V+S C
Sbjct: 623 -----------------SLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTR 665
Query: 285 LA----ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
L AD+M + I + I E V++ N L+ +G+ G ++ A+ +F ++ +NIV+
Sbjct: 666 LGDYSMADYMVRYIEDYCI----EVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVT 721
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
NA+I +YA+ A ++F Q+ K D +ISWS++I ++ +AL++F
Sbjct: 722 MNAMIAAYAKGQDIVSARKIFDQIPKKD--------LISWSSMISGYSQANHFSDALEIF 773
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
R+MQ AKV +++ I+ ++S CA AL++G+ +H +V R ++ + +++N L++MYMKC
Sbjct: 774 RQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKC 833
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
G +E VF+++++KD ++WNS+I G NG + +L F+ M+ GF+P+GV F+ VL
Sbjct: 834 GSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVL 893
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
AC++A LV EG F+ M R + +EPQM+HY C+VDLLGRAG L++A + MP++P+
Sbjct: 894 IACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPIDPD 953
Query: 581 AYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRIS 640
VW LL SC H + +AE + ++ L +G+Y LLSN YA++ RW +A VR
Sbjct: 954 PVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNVRQC 1013
Query: 641 AKTKGLKKVAGQSWIE 656
++K G S +E
Sbjct: 1014 MADTDVRKSPGCSAVE 1029
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 217/402 (53%), Gaps = 10/402 (2%)
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
W +LL +++ ++ + LF R + A L CA L +HG
Sbjct: 56 TPWHALLKAYSHGPHPQDALQLFRHARWHAAD-DTYAFTFALKACAGLGWPRCCMQLHGL 114
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
V++ GFE +V AL+ VY G + ++ F E+ KN VSWN +IT +A G + A
Sbjct: 115 VVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVITGFAGWGEVEYA 174
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
+F + M NV+SWS +I + R EA+ LFR+M + + +T+
Sbjct: 175 RLLFER--------MPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLA 226
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF-EQIEKK 476
++ + + IG +HG+ + + ++ V N L+++Y K G ++ VF E ++++
Sbjct: 227 VVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRR 286
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
+L++W S+ISG+ M+GL A+ F +M AG +P+ + F++VL ACSH GLV +G F
Sbjct: 287 NLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQGVAFF 346
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
M+ E+ I P ++H+ C++D+LGRAG L+EA I+++ P+E NA VW TLL C +
Sbjct: 347 KSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGE 406
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
++ E +I L E G +++LSN+ R+ DA VR
Sbjct: 407 VEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVR 448
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 178/368 (48%), Gaps = 47/368 (12%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
LL+ QL Q+H+QLI A VF+ P
Sbjct: 28 LLEHQDRRRQLLQIHSQLI--------------------------AHQVFDRRPTP---- 57
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
W+++L+ ++AL+L+ + + D + F ++AC +G R
Sbjct: 58 ---WHALLKAYSHGPHPQDALQLF-RHARWHAADDTYAFTFALKACAGLGWPRCCMQ--- 110
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H V++ GF+ ++ L+ +Y G ++DS F+++ VKN +SWN++ +GFA
Sbjct: 111 -LHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVVITGFAGWG 169
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
+ + A LF+RM N V+W+ ++ + R R E + LF M GI +
Sbjct: 170 EVEYARLLFERMPCR----NVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVL 225
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE-IEE 335
V+ +++ +G+ +HG+ K G V V N+LI +Y K G ++ + +F E ++
Sbjct: 226 AVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDR 285
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
+N+VSW ++I+ +A GL +AVE+F+ + + + RPN I++ +V+ A + G E+
Sbjct: 286 RNLVSWTSIISGFAMHGLSVKAVELFADMRR----AGIRPNRITFLSVLHACSHGGLVEQ 341
Query: 396 ALDLFRKM 403
+ F+ M
Sbjct: 342 GVAFFKSM 349
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 210/665 (31%), Positives = 353/665 (53%), Gaps = 51/665 (7%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGAN-ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
L ++ LKQVH Q++ + + +++ L V+S A L A +VF P K
Sbjct: 30 LSSATSLTHLKQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIP---KPE 86
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
+ L N LR + E L +Y +MR G+ D F+FP +++A + S G
Sbjct: 87 THLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSL----VEGL 142
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H ++GF + + L+ MYA G+++++ +FDK+ ++ ++W++M G+ +
Sbjct: 143 EIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSG 202
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
+ AL LF+ M+ +EP+ + +++LS+ R G L
Sbjct: 203 LFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLS---------------------- 240
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
GK+IH F+++ +++AL+ +Y G + +A NLF ++ K
Sbjct: 241 -------------YGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPK 287
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
N+V+ A++T Y++ G + A VF+Q+ K D ++ WSA+I +A + +EA
Sbjct: 288 NLVASTAMVTGYSKLGQIENARSVFNQMVKKD--------LVCWSAMISGYAESDSPQEA 339
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
L+LF +MQ + + VT+ +++ CA AL+ + IH V + + + N L+ M
Sbjct: 340 LNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEM 399
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCG LE +F+++ +K++I+W MIS + M+G +AL F +M + +P+G+ F
Sbjct: 400 YAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITF 459
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
V VL ACSHAGLV EGR+IF M+ E I P+ HY CMVDL GRA LL+EA ++V+ MP
Sbjct: 460 VGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMP 519
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAK 636
+ PN +WG+L+ +CR+H ++ E A ++ L + G+++ LSNIYA + RWED +
Sbjct: 520 LAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQ 579
Query: 637 VRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
VR K KG+ K G S E+ +IH F + + E L E+ +++ G P+
Sbjct: 580 VRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPN 639
Query: 697 NDIIL 701
IL
Sbjct: 640 TCSIL 644
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 205/684 (29%), Positives = 346/684 (50%), Gaps = 94/684 (13%)
Query: 19 RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGR 78
+P+++ T SL H K + + K++H+ +++ G S ++++Y++ +
Sbjct: 33 QPYNLTTCIASLQASAHH-----KNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQ 87
Query: 79 LFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLV 138
+ A ++F + + +N+I+ ++NG E + Y KMR GV+ D FTFP
Sbjct: 88 MNFALSIFSDPTHEI--NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCA 145
Query: 139 IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR 198
I+AC + + +H + + G + +V I + L+ Y K G M + F+++
Sbjct: 146 IKACLDVLEIK-------KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELP 198
Query: 199 VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD 258
+++ + WN M +G +A+ G+ E ++
Sbjct: 199 IRDVVLWNAMVNG-----------------------------------YAQIGQFEMVLE 223
Query: 259 LFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG 318
F M + + VLSV A + + G++IHGF +K G++ V V N+LI +YG
Sbjct: 224 TFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYG 283
Query: 319 KHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
K ++A+E+F + + D +
Sbjct: 284 K-------------------------------CKCIEDALEIFEMMREKD--------IF 304
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHV 438
SW++++ G + L L +M A + + VT++ +L C+ AAL GREIHG++
Sbjct: 305 SWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYM 364
Query: 439 VRVSMNKN------ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
+ + K+ +L++N +++MY KCG + + HLVFE++ KD+ +WN MI GYGM+G
Sbjct: 365 IVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHG 424
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
G AL F M E KPD V FV VLSACSHAG V++GR M ++ + P +EHY
Sbjct: 425 YGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHY 484
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
C++D+LGRAG L EA ++ MP+E N VW LL +CR+HK+ +AE A ++F L
Sbjct: 485 TCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEP 544
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
E GSY+L+SN+Y A GR+E+ +VR + + + ++K G SWIE+K +H+F S +
Sbjct: 545 EHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHP 604
Query: 673 DLKNVCEVLEELALQMENKGCVPD 696
+ ++ L L ++ G VPD
Sbjct: 605 EAHSIYAGLNSLTARLREHGYVPD 628
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/593 (32%), Positives = 317/593 (53%), Gaps = 84/593 (14%)
Query: 116 ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVN 175
A++ M + GV D T+ +I+ C G+ + G+ VH H+ G++ + +VN
Sbjct: 39 AMRAMDAMERHGVFADAITYSELIKCCSARGAVQE----GKRVHEHIFCKGYEPKMFVVN 94
Query: 176 ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
L+ MY K + ++ LFD++ +N +SW M S ++ + D AL+ M EG+ P
Sbjct: 95 TLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLN-DKALKCLILMFREGVRP 153
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
N T++S+L + C L L H
Sbjct: 154 NMFTYSSVLRA---CDGLPNLRQL-----------------------------------H 175
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
+IK G E VFV++ALI VY K D+ D
Sbjct: 176 CGIIKTGLESDVFVRSALIDVYSKWSDL-------------------------------D 204
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
A+ VF ++ D ++ W+++IG FA N G EAL+LF++M+ A +A+ T+
Sbjct: 205 NALGVFDEMPTRD--------LVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATL 256
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
+ +L C A L +GR++H HV++ ++++++ N L++MY KCG LE+ + F ++ +
Sbjct: 257 TSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVE 314
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
KD+I+W++M++G NG AL FE M E+G +P+ + + VL ACSHAGLV +G
Sbjct: 315 KDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYY 374
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
F M + F ++P EHY C++DLLGRAG L EA ++ M EP++ W TLL +CR+H+
Sbjct: 375 FRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHR 434
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
N D+A A +I L E G+Y+LLSNIYA + RWED A+VR + +G++K G SWI
Sbjct: 435 NVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWI 494
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKK 708
EV ++IH+F G++ ++ + + L +L ++ G VPD + +L ++ G++
Sbjct: 495 EVDKQIHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQ 547
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/518 (23%), Positives = 234/518 (45%), Gaps = 94/518 (18%)
Query: 10 HQFSPSNPSRPFSIITYNNSLLDC--FDHLLQQCKT---IHQLKQVHNQLIVTGANASAF 64
HQ+ R + + D + L++ C + + K+VH + G F
Sbjct: 32 HQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMF 91
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
+ +L++Y +F L +A ++F+ P + + + W +++ SN L + ALK + M
Sbjct: 92 VVNTLLNMYVKFNLLEEAEDLFDEMP---ERNVVSWTTMISA-YSNKLNDKALKCLILMF 147
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
+ GV + FT+ V+RAC + + R +H +++ G + +V + + LI +Y+K
Sbjct: 148 REGVRPNMFTYSSVLRACDGLPNLR-------QLHCGIIKTGLESDVFVRSALIDVYSKW 200
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
+ ++ +FD++ ++ + WN + GFA N D + AL LFKRM+ G + T TS
Sbjct: 201 SDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTS-- 258
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
VL C LA +G+ +H V+K F+
Sbjct: 259 ---------------------------------VLRACTGLALLELGRQVHVHVLK--FD 283
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
+ + NALI +Y K G ++ A + FS + EK+++SW+ ++ A+ G +A+E+F +
Sbjct: 284 QDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESM 343
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
++ S RPN I+ V+ A + G E+ FR M+ +
Sbjct: 344 KE----SGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMK-------------------K 380
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE-KKDLITWNS 483
++ GRE +G L+++ + G L+E + ++E + D +TW +
Sbjct: 381 LFGVDPGREHYG---------------CLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRT 425
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
++ ++ + A+ +++IE +P+ +LS
Sbjct: 426 LLGACRVHRNVDLAIYAAKKIIE--LEPEDAGTYILLS 461
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 207/462 (44%), Gaps = 75/462 (16%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+ +L+ C + L+Q+H +I TG + F+ + ++ +Y+++ L +A VF+ P
Sbjct: 158 YSSVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMP--- 214
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
++WNSI+ N AL L+ +M++ G L D T V+RAC +
Sbjct: 215 TRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALL----E 270
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ VH HVL+ F ++ + N LI MY K G + D+ F ++ K+ ISW+ M +G A
Sbjct: 271 LGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLA 328
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGA 272
N ALELF+ M+ G PN++T +L + + G +E+ F M+K G++ G
Sbjct: 329 QNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGR 388
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
E H G LI + G+ G + A L E
Sbjct: 389 E---------------HYG--------------------CLIDLLGRAGRLDEAVKLIHE 413
Query: 333 IE-EKNIVSWNALITS---YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+E E + V+W L+ + + L A + +LE D G ++ + +A
Sbjct: 414 MECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAG--------TYILLSNIYA 465
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI- 447
+ R E+ ++ + M T G+ + + + ++IH ++ + + I
Sbjct: 466 NTQRWEDVAEVRKTM----------TNRGIRKTPG-CSWIEVDKQIHVFILGDTSHPKIE 514
Query: 448 -LVQ--NGLLNMYMKCGCLEEGHLVFEQIE---KKDLITWNS 483
+VQ N L+ M G + + + V + +E K+D + ++S
Sbjct: 515 EIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHS 556
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 203/661 (30%), Positives = 339/661 (51%), Gaps = 81/661 (12%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
I + +H ++ G + F+ ++ +YA+ + +A +F+ FD + + +LW ++
Sbjct: 178 IQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFD-RKNHVLWTAM 236
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
+ NG A++ + M GV + +TFP ++ AC S FG+ VH ++
Sbjct: 237 VTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTAC----SSVLARCFGEQVHGFIV 292
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
+ GF NV++ + L+ MYAK G D A
Sbjct: 293 KSGFGSNVYVQSALVDMYAKCG-------------------------------DLKNAKN 321
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
+ + ME + + V+W SL+ R G EE + LF M R +++ VL+ C
Sbjct: 322 MLETME----DDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC- 376
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
+ K +HG +IK GFE+Y V NAL+
Sbjct: 377 -VVGSINPKSVHGLIIKTGFENYKLVSNALV----------------------------- 406
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
YA+ G D A VF ++ + D VISW++++ +A N EE+L +F M
Sbjct: 407 --DMYAKTGDMDCAYTVFEKMLEKD--------VISWTSLVTGYAQNNSHEESLKIFCDM 456
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
++ V + ++ +LS CAE L G+++H ++ + + V N L+ MY KCGCL
Sbjct: 457 RVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCL 516
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
++ +F ++ KD+ITW ++I GY NG G N+L ++ M+ +G +PD + F+ +L AC
Sbjct: 517 DDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFAC 576
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
SHAGLV+EGR+ F M + + I+P EHYACM+DL GR+G L EA ++ M ++P+A V
Sbjct: 577 SHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATV 636
Query: 584 WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKT 643
W +LL++CR+H+N ++AE A+ +F L Y++LSN+Y+AS +W D AK+R K+
Sbjct: 637 WKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKS 696
Query: 644 KGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWE 703
KG+ K G SW+E+ +++ F S + + ++E+ L+++ G VPD L +
Sbjct: 697 KGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHD 756
Query: 704 M 704
M
Sbjct: 757 M 757
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 69/185 (37%), Gaps = 33/185 (17%)
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS------------- 483
H + ++I N LLN K G + + +F+++ +KD +WN+
Sbjct: 55 HTTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVE 114
Query: 484 ------------------MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
+ISGY G A F M G+K +VL CS
Sbjct: 115 ARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSS 174
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME-PNAYVW 584
GL+ G I +V+ E + +VD+ + + EA + K + + N +W
Sbjct: 175 LGLIQTGEMIHGFVVKN-GFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLW 233
Query: 585 GTLLN 589
++
Sbjct: 234 TAMVT 238
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 215/711 (30%), Positives = 362/711 (50%), Gaps = 111/711 (15%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H+ ++ N FL ++ Y + GR +AR +F+ +S+ + WN ++
Sbjct: 159 KQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKK--LKDRSNIVAWNVMIGGF 216
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
NGL+EN+L+ Y+ + V +F + AC G F SFG+ VH +++GF
Sbjct: 217 GENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACG-QGEF---VSFGKQVHCDAIKVGF 272
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ + ++ L+ MY K + + K+F++V K WN + S + N AL ++K+
Sbjct: 273 EDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQ 332
Query: 228 MEL-----------------------------------EGLEPNFVTWTSLLSSHARCGR 252
M+L L+ + ++LL+ +++ G
Sbjct: 333 MKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGD 392
Query: 253 LEETMDLFDMMRKRG-------------------------------IEVGAEAIAVVLSV 281
+F M++R ++ ++ +A ++S
Sbjct: 393 SNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISA 452
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
C L +G IHGFVIK G + VFV ++L+ +Y K G + A N+FS++ KN+V+W
Sbjct: 453 CTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAW 512
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
N++I+ Y L D ++ +FSQ+ + D P+ +S+++V+ A +S
Sbjct: 513 NSIISCYCRNNLPDLSINLFSQVLRND----LYPDSVSFTSVLAAISS------------ 556
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
AAL G+ +HG++VR+ + ++ V+N L++MY+KCG
Sbjct: 557 -----------------------VAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCG 593
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
L+ +FE+I +K+L+ WNSMI GYG +G A+ F+EM +G KPD V F+++LS
Sbjct: 594 LLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLS 653
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
+C+H+GL+ EG +F+MM +F IEP+MEHY +VDL GRAG L +A VKNMP+EP+
Sbjct: 654 SCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDR 713
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISA 641
+W +LL SC++H N ++ E +A+++ + +Y+ L N+Y + W+ A +R S
Sbjct: 714 SIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASM 773
Query: 642 KTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
K KGLKK G SWIEV+ K+ +F SG+ + + L L M KG
Sbjct: 774 KEKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITTEIYDTLSSLKRNMIKKG 824
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 146/597 (24%), Positives = 258/597 (43%), Gaps = 125/597 (20%)
Query: 113 YENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVH 172
Y ALKLY K V FT+P +++AC + + ++ G+ +H+ ++ G + +
Sbjct: 37 YIEALKLYTKSP---VYTTRFTYPSLLKACASLSNLQY----GKTIHSSIITTGLHSDQY 89
Query: 173 IVNELIGMYAKMGQMSDSFKLFDK-----VRVKNYISWNMMFSGFALNFDCDGALELFKR 227
I + LI +Y K G +D+ K+FD+ V V + WN + G+ + + F R
Sbjct: 90 ITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGR 149
Query: 228 MELEGLEP-------------NFVTW--TSLLSSHARCGRLEETMDLFDMMRKRG----- 267
M+ G + NF + T+L+ ++ +CGR E LF ++ R
Sbjct: 150 MQSSGYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAW 209
Query: 268 ---------------------------IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
++V + + LS C GK +H IK
Sbjct: 210 NVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIK 269
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
GFED +V +L+ +YGK ++ A+ +F+E+ +K I WNALI++Y G +A+ +
Sbjct: 270 VGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRI 329
Query: 361 FSQ-------------LEKLDGGSM---------------ERP---NVISWSAVIGAFAS 389
+ Q L L SM +RP ++ SA++ ++
Sbjct: 330 YKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSK 389
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISG-------------------------------L 418
G A +F M+ VVA ISG +
Sbjct: 390 FGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASI 449
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
+S C +++G IHG V++ + ++ V + LL+MY K G E +F + K+L
Sbjct: 450 ISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNL 509
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
+ WNS+IS Y N L + ++ F +++ PD V+F +VL+A S + +G+ +
Sbjct: 510 VAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGY 569
Query: 539 MVREF-RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+VR + + Q+E+ ++D+ + GLL+ A I + + E N W +++ H
Sbjct: 570 LVRLWIPFDLQVEN--TLIDMYIKCGLLKYAQHIFERIS-EKNLVAWNSMIGGYGSH 623
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 133/337 (39%), Gaps = 88/337 (26%)
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
EAL L+ K + V T LL CA + L G+ IH ++ ++ + + + L+
Sbjct: 39 EALKLYTK---SPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLI 95
Query: 455 NMYMKCGCLEEGHLVFEQIEKK-----DLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
N+Y+KCG + VF+Q+ K D+ WNS+I GY G E + F M +G+
Sbjct: 96 NIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSGY 155
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHYACMVDLLGRAGLLQEA 568
K EG++I +VR +P +E ++D + G EA
Sbjct: 156 K--------------------EGKQIHSYIVRNMLNFDPFLE--TALIDTYFKCGRPTEA 193
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
+ K + N W ++ + +
Sbjct: 194 RYLFKKLKDRSNIVAWNVMIGG----------------------------------FGEN 219
Query: 629 GRWEDAAKVRISAKTKGLKKVA----------GQ-SWIEVKRKIHMFSSGNSLQSD---- 673
G WE++ + + AKT+ +K V+ GQ ++ +++H + + D
Sbjct: 220 GLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVH 279
Query: 674 -----LKNVCEVLEELALQMENKGCVPDNDIILWEMM 705
+ C+++E A ++ N+ VPD +I LW +
Sbjct: 280 TSLLTMYGKCQMIES-AEKVFNE--VPDKEIELWNAL 313
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 199/573 (34%), Positives = 322/573 (56%), Gaps = 76/573 (13%)
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
T+ L+I +C S G +H H++ G + + +LI MY+++ + ++ K+
Sbjct: 80 TYELLILSCTRQNSL----PQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKV 135
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FDK R + WN +F L L+L++RM G+ + T+T +L + C
Sbjct: 136 FDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKA---C--- 189
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
V +EA +L G+ IHG +++ GFE +V + L
Sbjct: 190 ----------------VASEAFVSLLL---------NGREIHGHILRHGFEGHVHIMTTL 224
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ +Y + G V A +F ++ K
Sbjct: 225 LDMYARFGCVLNASRVFDQMPVK------------------------------------- 247
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQL--AKVVANSVTISGLLSVCAESAALNIG 431
NV+SWSA+I ++ NG+ EAL+LFRKM L ++ NSVT+ +L CA AAL G
Sbjct: 248 --NVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQG 305
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
+ +HG+++R ++ + V + L+ +Y +CG LE GH VFE++EK+D+++WNS+IS YG++
Sbjct: 306 KLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIH 365
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G G A+ F+EMI+ G P ++FV+VL ACSHAGLV EG+ +F+ MVR +I P +EH
Sbjct: 366 GFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEH 425
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
YACMVDLLGRA L EA+ I+ +M +EP VWG+LL SCR+H N ++AE S++F L
Sbjct: 426 YACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELE 485
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
G+Y+LL++IYA + W + +V++ + +GL+KV G+S IE++RKI+ F S +
Sbjct: 486 PTNAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFN 545
Query: 672 SDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
++ + +L +L+++M+ KG VPD ++L+++
Sbjct: 546 PQIEQLHALLLKLSMEMKEKGYVPDTKVVLYDL 578
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 203/381 (53%), Gaps = 47/381 (12%)
Query: 28 NSLLDCFDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
N ++ L+ C + L Q +H LI G++ FLA +++++Y+ + +AR
Sbjct: 75 NPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARK 134
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
VF+ K + +WN++ R G L LY +M ++GV D FT+ V++AC
Sbjct: 135 VFDKTR---KRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVA 191
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
+F G+ +H H+L+ GF+G+VHI+ L+ MYA+ G + ++ ++FD++ VKN +S
Sbjct: 192 SEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVS 251
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEG--LEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
W+ M + ++ N ALELF++M LE L PN VT S+L + A LE+
Sbjct: 252 WSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQ------- 304
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
GK++HG++++ G + + V +AL+ VY + G+
Sbjct: 305 ----------------------------GKLMHGYILRRGLDSILPVVSALVTVYARCGN 336
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
+++ +F +E++++VSWN+LI+SY G +A+++F ++ +D G P+ IS+ +
Sbjct: 337 LELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEM--IDQGL--SPSPISFVS 392
Query: 383 VIGAFASNGRGEEALDLFRKM 403
V+GA + G EE LF M
Sbjct: 393 VLGACSHAGLVEEGKVLFESM 413
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 203/648 (31%), Positives = 336/648 (51%), Gaps = 50/648 (7%)
Query: 59 ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
N + L R+L G A+ +F+ P + ++++ + GL A++
Sbjct: 62 TNIPSHLGLRLLKAALNVGDFRRAQQLFDNIP---QPDPTTCSTLISAFTTRGLPNEAIR 118
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
LY +R G+ F V +AC G S + VH+ ++ G + + N LI
Sbjct: 119 LYASLRARGIKPHNSVFLTVAKACGASGDA----SRVKEVHDDAIRCGMMSDAFLGNALI 174
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
Y K + + ++FD + VK+ +SW
Sbjct: 175 HAYGKCKCVEGARRVFDDLVVKDVVSW--------------------------------- 201
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
TS+ S + CG + +F M G++ + ++ +L C++L G+ IHGF
Sbjct: 202 --TSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFA 259
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
++ G + VFV +AL+ +Y + VK A+ +F + +++VSWN ++T+Y D+ +
Sbjct: 260 VRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGL 319
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
+FSQ+ + E +W+AVIG NG+ E+A+++ RKMQ N +TIS
Sbjct: 320 ALFSQMSSKGVEADE----ATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSF 375
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
L C+ +L +G+E+H +V R + ++ L+ MY KCG L VF+ I +KD+
Sbjct: 376 LPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDV 435
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
+ WN+MI M+G G L FE M+++G KP+ V F VLS CSH+ LV EG +IF+
Sbjct: 436 VAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNS 495
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
M R+ +EP HYACMVD+ RAG L EA + ++ MPMEP A WG LL +CR++KN +
Sbjct: 496 MGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVE 555
Query: 599 VAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
+A+ A+++F + G+Y+ L NI + W +A++ RI K +G+ K G SW++V
Sbjct: 556 LAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVG 615
Query: 659 RKIHMFSSG--NSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
++H F G N+++SD + L+EL +M++ G PD D +L ++
Sbjct: 616 DRVHTFVVGDKNNMESD--KIYNFLDELGEKMKSAGYKPDTDYVLQDI 661
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 202/447 (45%), Gaps = 58/447 (12%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
++K+VH+ I G + AFL ++ Y + + AR VF+ + W S+
Sbjct: 150 RVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVV---KDVVSWTSMSS 206
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
V+ GL L ++ +M GV + T ++ AC + + G+ +H ++
Sbjct: 207 CYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLK----SGRAIHGFAVRH 262
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
G NV + + L+ +YA+ + + +FD + ++ +SWN + + + N + D L LF
Sbjct: 263 GMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALF 322
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
+M +G+E + TW +++ G+ E+ +++ M+ G + I+ L C+ L
Sbjct: 323 SQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSIL 382
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+ MGK +H +V + + AL+ +Y K GD+ +++N+F I K++V+WN +I
Sbjct: 383 ESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMI 442
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
A A +G G E L LF M
Sbjct: 443 I---------------------------------------ANAMHGNGREVLLLFESMLQ 463
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG------LLNMYMK 459
+ + NSVT +G+LS C+ S + G +I SM ++ LV+ +++++ +
Sbjct: 464 SGIKPNSVTFTGVLSGCSHSRLVEEGLQIFN-----SMGRDHLVEPDANHYACMVDVFSR 518
Query: 460 CGCLEEGHLVFEQIEKKDLIT-WNSMI 485
G L E + +++ + + W +++
Sbjct: 519 AGRLHEAYEFIQRMPMEPTASAWGALL 545
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 158/362 (43%), Gaps = 46/362 (12%)
Query: 37 LLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP--- 90
+L C + LK +H + G + F+ + ++S+YAR + AR VF+ P
Sbjct: 239 ILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRD 298
Query: 91 ----------------FD-------------CKSSSLLWNSILRVNVSNGLYENALKLYV 121
+D ++ WN+++ + NG E A+++
Sbjct: 299 VVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLR 358
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
KM+ LG + T + AC + S R G+ VH +V + G++ + L+ MY
Sbjct: 359 KMQNLGFKPNQITISSFLPACSILESLR----MGKEVHCYVFRHWLIGDLTTMTALVYMY 414
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
AK G ++ S +FD + K+ ++WN M A++ + L LF+ M G++PN VT+T
Sbjct: 415 AKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFT 474
Query: 242 SLLSSHARCGRLEETMDLFDMM-RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
+LS + +EE + +F+ M R +E A A ++ V + H + F+ +
Sbjct: 475 GVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEA---YEFIQR 531
Query: 301 GGFEDYVFVKNALI--C-VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
E AL+ C VY K++ N EIE N ++ +L A L EA
Sbjct: 532 MPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEA 591
Query: 358 VE 359
E
Sbjct: 592 SE 593
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 195/662 (29%), Positives = 344/662 (51%), Gaps = 87/662 (13%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
L +C + +K+VH Q+I + ++A +++S ++ ++ A NVF +
Sbjct: 30 LHKCTDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQ---DPNV 86
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
L+N+++R +V N A + M+K G+ D FT+P +++AC G Q+
Sbjct: 87 HLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKG----WLPTVQM 142
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H HV + GF G++ + N LI Y+K G + ++
Sbjct: 143 IHCHVEKYGFFGDLFVPNSLIDSYSKCGLLGVNY-------------------------- 176
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
A++LF M E + V+W S++ + G L LFD M +R +A++
Sbjct: 177 ---AMKLFMEMG----EKDLVSWNSMIGGLVKAGDLGRARKLFDEMAER------DAVSW 223
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
N ++ Y K G++ A NLF ++ E+N
Sbjct: 224 ---------------------------------NTILDGYVKAGEMSQAFNLFEKMPERN 250
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
+VSW+ +++ Y + G + A +F + M N+++W+ +I FA G +EA
Sbjct: 251 VVSWSTMVSGYCKTGDMEMARMLFDK--------MPFKNLVTWTIIISGFAEKGLAKEAT 302
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
L+ +M+ A + + T+ +L+ CAES L +G+++H + ++ + ++ V N L++MY
Sbjct: 303 TLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMY 362
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG +++ +F ++ +DL++WN M+ G M+G GE A+ F +M + GFKPD V +
Sbjct: 363 AKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLI 422
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
A+L AC+HAG V++G F+ M R+ I P +EHY CM+DLLGR G L+EA +V++MPM
Sbjct: 423 AILCACTHAGFVDQGLSYFNSMERDHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPM 482
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
EPN +WGTLL +CR+H +AE + ++ L G+Y +LSNI+AA+G W A +
Sbjct: 483 EPNDVIWGTLLGACRVHNAVPLAEKVLDRLITLEQSDPGNYSMLSNIFAAAGDWNSVANM 542
Query: 638 RISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
R+ K+ G++K +G S IE+ ++H F+ + + + ++L +L ++ P+
Sbjct: 543 RLQMKSTGVQKPSGASSIELDDEVHEFTVFDKSHPETDKIYQILVKLGQDLKQVAYAPEA 602
Query: 698 DI 699
D+
Sbjct: 603 DL 604
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 206/670 (30%), Positives = 349/670 (52%), Gaps = 59/670 (8%)
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
G+L AR VF+ P + +N+++R G + A+ LY M V + +TFP
Sbjct: 47 GQLALARQVFDRIP---APDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFP 103
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
V++AC + G+ +H H +G ++ + LI +Y + + + +F K
Sbjct: 104 FVLKACSALADL----CAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAK 159
Query: 197 VRVKNYISWNMMFSGFALNFDCDGAL-ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
+ +++ ++WN M +G+A + A+ L + GL PN T SLL A+ G L +
Sbjct: 160 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQ 219
Query: 256 TMDLFDMMRKRGIEVGAEAIAV------VLSVCADLAADHMGKVIHGFVIK--------- 300
+ + ++ E + + + + C L + +V HG ++
Sbjct: 220 GTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLV--YACRVFHGMTVRNEVTWSALI 277
Query: 301 GGF-------EDYVFVKNALI---C------------VYGKHGDVKVAQNLFSEIEEKNI 338
GGF E + K+ L+ C V D+++ L + + + I
Sbjct: 278 GGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGI 337
Query: 339 ----VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
+ N+L++ YA+AGL +EA +F ++ D IS+ A++ + NG+ E
Sbjct: 338 HADLTAGNSLLSMYAKAGLINEATMLFDEIAIKD--------TISYGALLSGYVQNGKAE 389
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
EA +F+KMQ V + T+ L+ C+ AAL GR HG V+ + + N L+
Sbjct: 390 EAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLI 449
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCG ++ VF+++ +D+++WN+MI+GYG++GLG+ A F M GF+PD V
Sbjct: 450 DMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDV 509
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F+ +++ACSH+GLV EG+ FD M ++ I P+MEHY CMVDLL R G L EA +++
Sbjct: 510 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQS 569
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP++ + VWG LL +CR+HKN D+ + ++ I L E TG+++LLSNI++A+GR+++A
Sbjct: 570 MPLKADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEA 629
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
A+VRI K KG KK G SWIE+ +H F G+ ++ L+ + + ++ G
Sbjct: 630 AEVRIIQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQ 689
Query: 695 PDNDIILWEM 704
D +L ++
Sbjct: 690 ADTSFVLQDL 699
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 122/258 (47%), Gaps = 12/258 (4%)
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
E K+ W + + G A +VF ++ P+ +++A+I A++ G
Sbjct: 29 EVKDNKEWQQELEQHIARGQLALARQVFDRIPA--------PDARAYNALIRAYSWRGPF 80
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
A+DL+R M +V N T +L C+ A L GR IH H V ++ ++ V L
Sbjct: 81 HAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTAL 140
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE-AGFKPD 512
+++Y++C VF ++ +D++ WN+M++GY +G+ +A+A +M + G +P+
Sbjct: 141 IDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPN 200
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREF--RIEPQMEHYACMVDLLGRAGLLQEASD 570
V++L + G + +G + +R + + E Q+ ++D+ + L A
Sbjct: 201 ASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACR 260
Query: 571 IVKNMPMEPNAYVWGTLL 588
+ M + N W L+
Sbjct: 261 VFHGMTVR-NEVTWSALI 277
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 177/379 (46%), Gaps = 46/379 (12%)
Query: 38 LQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCK 94
L+ C ++ L+ Q+H L +G +A +LS+YA+ G + +A +F+
Sbjct: 313 LRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAI--- 369
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
++ + ++L V NG E A ++ KM+ V D T +I AC + + +
Sbjct: 370 KDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQH---- 425
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ H V+ G I N LI MYAK G++ S ++FDK+ ++ +SWN M +G+ +
Sbjct: 426 GRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGI 485
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAE 273
+ A LF M+ +G EP+ VT+ L+++ + G + E FD M K GI E
Sbjct: 486 HGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRME 545
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGF--EDYVFVKN----ALICVYGK-------H 320
++ + A +GGF E Y F+++ A + V+G H
Sbjct: 546 HYICMVDLLA----------------RGGFLDEAYQFIQSMPLKADVRVWGALLGACRIH 589
Query: 321 GDVKVAQNLFSEIEE---KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
++ + + + I++ + ++ L ++ AG DEA EV ++K+ G ++
Sbjct: 590 KNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEV-RIIQKVKG--FKKSPG 646
Query: 378 ISWSAVIGAFASNGRGEEA 396
SW + G+ + G+++
Sbjct: 647 CSWIEINGSLHAFVGGDQS 665
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 217/706 (30%), Positives = 362/706 (51%), Gaps = 98/706 (13%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H + G ++AF+ ++ YA G + AR F+ CK + W ++
Sbjct: 63 LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIA--CKDM-VSWTGMVACYAE 119
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
N ++++L+L+ +MR +G + FTF V++AC + +F S G+ VH VL+ ++
Sbjct: 120 NDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAF----SVGKSVHGCVLKTCYEM 175
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
++++ L+ +Y K G +D ++F+
Sbjct: 176 DLYVGVGLLDLYTKFGDANDVLRVFE---------------------------------- 201
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
E + + + W+ ++S +A+ + E ++LF MR+ + A VL CA +
Sbjct: 202 -EMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQ 260
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+GK +H V+K G + VFV NAL+ VY A
Sbjct: 261 LGKQVHCHVLKVGLDGNVFVSNALMDVY-------------------------------A 289
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPN--VISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
+ G D ++++F ME PN ++W+ +I + +G G++AL L++ M +
Sbjct: 290 KCGRLDNSMKLF----------MELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQ 339
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
V A+ VT S +L CA AA+ +G +IH ++ +K+++V N L++MY KCG ++
Sbjct: 340 VQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNAR 399
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
LVF+ + ++D I+WN+MISGY M+GL AL F+ M E P+ + FV++LSACS+AG
Sbjct: 400 LVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAG 459
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
L++ G+ F MV+++ IEP MEHY CMV LLGR+G L +A +++ +P+EPN VW L
Sbjct: 460 LLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRAL 519
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
L +C +H + D+ A QI + + +++LLSNIYA + RW A VR K KG+K
Sbjct: 520 LGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVK 579
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGK 707
K G SWIE + +H FS G++ D+K + +LE L ++ E G VPD + +L
Sbjct: 580 KEPGLSWIENQGIVHYFSVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVL------ 633
Query: 708 KNVKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRSTNGQLMKN 753
R D+ K +H V L L L+ + + +++KN
Sbjct: 634 -------RDVEDDEKKRHLWVHSERLALAFGLIRTPSRGHIRILKN 672
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 180/356 (50%), Gaps = 46/356 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K VH ++ T ++ +L +Y +FG D VFE P K + W+ ++
Sbjct: 162 KSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMP---KHDVIPWSFMISRY 218
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+ A++L+ +MR+ VL + FTF V+++C + + + G+ VH HVL++G
Sbjct: 219 AQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQ----LGKQVHCHVLKVGL 274
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
GNV + N L+ +YAK G++ +S KLF ++ +N ++WN M G+ + D D AL L+K
Sbjct: 275 DGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKN 334
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M ++ + VT++S VL CA LAA
Sbjct: 335 MLECQVQASEVTYSS-----------------------------------VLRACASLAA 359
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+G IH +K ++ V V NALI +Y K G +K A+ +F + E++ +SWNA+I+
Sbjct: 360 MELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISG 419
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
Y+ GL EA++ F +++ + PN +++ +++ A ++ G + + F+ M
Sbjct: 420 YSMHGLVGEALKAFQMMQETEC----VPNKLTFVSILSACSNAGLLDIGQNYFKSM 471
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 197/447 (44%), Gaps = 76/447 (17%)
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
+ N V++ +L+ + + +L+E +DLF + + G E+ +L + + +
Sbjct: 3 DRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYS 62
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
+H + K G E FV ALI Y G V A+ F I K++VSW ++ YAE
Sbjct: 63 LHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDR 122
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA--------------------------- 386
+++++F+++ + PN +++ V+ A
Sbjct: 123 FQDSLQLFAEMRMVGFN----PNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLY 178
Query: 387 --------FASNGRGEEALDLFRKMQLAKVV----------------------------- 409
+ G + L +F +M V+
Sbjct: 179 VGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAF 238
Query: 410 --ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
N T + +L CA L +G+++H HV++V ++ N+ V N L+++Y KCG L+
Sbjct: 239 VLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSM 298
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
+F ++ ++ +TWN+MI GY +G G+ AL+ ++ M+E + V + +VL AC+
Sbjct: 299 KLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLA 358
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
+ G +I + ++ + + A ++D+ + G ++ A +V +M E + W +
Sbjct: 359 AMELGTQIHSLSLKTIYDKDVVVGNA-LIDMYAKCGSIKNAR-LVFDMLSERDEISWNAM 416
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITET 614
++ MH V EA+ + F ++ ET
Sbjct: 417 ISGYSMHGL--VGEALKA--FQMMQET 439
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 129/244 (52%), Gaps = 11/244 (4%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +LQ C +I L KQVH ++ G + + F++ ++ +YA+ GRL ++ +F P
Sbjct: 246 FASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELP 305
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + WN+++ V +G + AL LY M + V T+ V+RAC + +
Sbjct: 306 ---NRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAME- 361
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G +H+ L+ + +V + N LI MYAK G + ++ +FD + ++ ISWN M S
Sbjct: 362 ---LGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMIS 418
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIE 269
G++++ AL+ F+ M+ PN +T+ S+LS+ + G L+ + F M++ GIE
Sbjct: 419 GYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIE 478
Query: 270 VGAE 273
E
Sbjct: 479 PCME 482
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 122/306 (39%), Gaps = 46/306 (15%)
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
M N +S+ +I + + + +E +DLF ++ N + +L + +
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
+H + ++ N V L++ Y CG + F+ I KD+++W M++ Y N
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSAC---------------------------- 523
+++L F EM GF P+ F VL AC
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 524 -------SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
+ G N+ R+F+ M + I ++ M+ ++ +EA ++ M
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIP-----WSFMISRYAQSNQSREAVELFGQMR 235
Query: 577 ME---PNAYVWGTLLNSCRMHKNTDVAEAMASQIF--GLITETTGSYMLLSNIYAASGRW 631
PN + + ++L SC +N + + + + GL S L+ ++YA GR
Sbjct: 236 RAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALM-DVYAKCGRL 294
Query: 632 EDAAKV 637
+++ K+
Sbjct: 295 DNSMKL 300
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 127/319 (39%), Gaps = 66/319 (20%)
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM-------------------- 372
+ ++N VS+ LI Y ++ DE V++FS++ + +G +
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHR-EGHELNPFVFTTILKLLVSVECAEL 59
Query: 373 ------------ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA---------- 410
N +A+I A+A G A F + +V+
Sbjct: 60 AYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAE 119
Query: 411 ---------------------NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
N T +G+L C A ++G+ +HG V++ ++ V
Sbjct: 120 NDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYV 179
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
GLL++Y K G + VFE++ K D+I W+ MIS Y + A+ F +M A
Sbjct: 180 GVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFV 239
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
P+ F +VL +C+ + G+++ V + ++ + ++D+ + G L +
Sbjct: 240 LPNQFTFASVLQSCASIENLQLGKQVH-CHVLKVGLDGNVFVSNALMDVYAKCGRLDNSM 298
Query: 570 DIVKNMPMEPNAYVWGTLL 588
+ +P N W T++
Sbjct: 299 KLFMELP-NRNEVTWNTMI 316
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 205/684 (29%), Positives = 346/684 (50%), Gaps = 94/684 (13%)
Query: 19 RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGR 78
+P+++ T SL H K + + K++H+ +++ G S ++++Y++ +
Sbjct: 33 QPYNLTTCIASLQASAHH-----KNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQ 87
Query: 79 LFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLV 138
+ A ++F + + +N+I+ ++NG E + Y KMR GV+ D FTFP
Sbjct: 88 MNFALSIFSDPTHEI--NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCA 145
Query: 139 IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR 198
I+AC + + +H + + G + +V I + L+ Y K G M + F+++
Sbjct: 146 IKACLDVLEIK-------KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELP 198
Query: 199 VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD 258
+++ + WN M +G +A+ G+ E ++
Sbjct: 199 IRDVVLWNAMVNG-----------------------------------YAQIGQFEMVLE 223
Query: 259 LFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG 318
F M + + VLSV A + + G++IHGF +K G++ V V N+LI +YG
Sbjct: 224 TFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYG 283
Query: 319 KHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
K ++A+E+F + + D +
Sbjct: 284 K-------------------------------CKCIEDALEIFEMMREKD--------IF 304
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHV 438
SW++++ G + L L +M A + + VT++ +L C+ AAL GREIHG++
Sbjct: 305 SWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYM 364
Query: 439 VRVSMNKN------ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
+ + K+ +L++N +++MY KCG + + HLVFE++ KD+ +WN MI GYGM+G
Sbjct: 365 IVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHG 424
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
G AL F M E KPD V FV VLSACSHAG V++GR M ++ + P +EHY
Sbjct: 425 YGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHY 484
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
C++D+LGRAG L EA ++ MP+E N VW LL +CR+HK+ +AE A ++F L
Sbjct: 485 TCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEP 544
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
E GSY+L+SN+Y A GR+E+ +VR + + + ++K G SWIE+K +H+F S +
Sbjct: 545 EHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHP 604
Query: 673 DLKNVCEVLEELALQMENKGCVPD 696
+ ++ L L ++ G VPD
Sbjct: 605 EAHSIYAGLNSLTARLREHGYVPD 628
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 209/702 (29%), Positives = 357/702 (50%), Gaps = 98/702 (13%)
Query: 2 RHSLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANA 61
R+ L +PH S NP+R +L D F+ LLQQC +I QLKQ+H QL+ +
Sbjct: 13 RYLNLQKPH--SKPNPNR--------QALSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHK 62
Query: 62 SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR-VNVSNGLYENALKLY 120
++ + + F +VF + D S +N ++R ++ + AL+ Y
Sbjct: 63 PNSFLYKIADL-----KDFAYASVFFSNILDPTEYS--FNVMIRGLSTAWNKSSLALEFY 115
Query: 121 VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
+M+ LG+ + T+P + AC S G++ H V++ G + H+ + LI M
Sbjct: 116 SRMKFLGLKPNNLTYPFLFIAC----SNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITM 171
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
YA+ G+M D+ K+FD++ K+ V+W
Sbjct: 172 YARCGKMGDARKVFDEISQKD-----------------------------------LVSW 196
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
S++S +++ E + LF M + G + ++ VL C +L +G + FV++
Sbjct: 197 NSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVE 256
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
F+ +ALI +YGK GD+ A+ +F
Sbjct: 257 NKMTLNYFMGSALIHMYGKCGDLVSARRIFD----------------------------- 287
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
SM++ + ++W+A+I +A NG EEA+ LF+ M+++ + +T+ G+LS
Sbjct: 288 ----------SMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILS 337
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
CA AL++G+++ + ++ V L++MY KCG L+ VF + KK+ ++
Sbjct: 338 ACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVS 397
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAG--FKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
WN+MIS +G + ALA F+ M+ G P+ + FV VLSAC HAGLV+EGRR+F M
Sbjct: 398 WNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHM 457
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
M F + P++EHY+CMVDL RAG L+EA D V MP +P+ + G LL +C+ KN D
Sbjct: 458 MSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNID 517
Query: 599 VAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
++E + + L +G+Y++ S +YA RW+D+A++R+ K KG+ K G SWI++
Sbjct: 518 ISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDIN 577
Query: 659 RKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
++H F +G+ L + + ++L+ L + +G +P+ +++
Sbjct: 578 SQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREGYIPNANLL 619
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 221/782 (28%), Positives = 367/782 (46%), Gaps = 143/782 (18%)
Query: 1 MRHSLLHQPHQFSPSNPSRPFSI-ITYNNS----------LLDCFD-HLLQQCKTIHQ-- 46
+ HS + +P F+ S P S+ + +S L DC D L+Q KT+H
Sbjct: 37 ITHSAIQKP--FATSGIKTPNSVKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFL 94
Query: 47 LKQV---HNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
LK H+ L++ A A+ + R RN F W +
Sbjct: 95 LKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFS------------WTVL 142
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
+ NGL+ + + + +M+ G+ D F + +++ C + S G +VH ++
Sbjct: 143 IAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIEL----GNMVHAQIV 198
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
GF + + L+ MYAK+ ++ DS+K+F+ + N +SWN M +GF N A +
Sbjct: 199 IRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFD 258
Query: 224 LFKRMELEGLEPNFVTW-----------------------------------TSLLSSHA 248
LF RM EG+ P+ T+ T+L+ ++
Sbjct: 259 LFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNS 318
Query: 249 RCGRLEE---------------------------------TMDLFDMMRKRGIEVGAEAI 275
+CG L+E ++LF M + I +
Sbjct: 319 KCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTY 378
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
V + A L +GK +H IK G E +YV + NA+ Y K G ++ + +F+ +E
Sbjct: 379 CSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRME 438
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
+++++SW +L+T+Y++ D+A+E+F SN R E
Sbjct: 439 DRDLISWTSLVTAYSQCSEWDKAIEIF---------------------------SNMRAE 471
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
+ N T S +L CA L G+++HG + +V ++ + +++ L+
Sbjct: 472 ------------GIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALV 519
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCGCL + VF +I D ++W ++I+G+ +G+ ++AL F M++ G +P+ V
Sbjct: 520 DMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAV 579
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F+ VL ACSH GLV EG + F +M + + + P+MEHYAC+VDLL R G L +A + +
Sbjct: 580 TFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISR 639
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP+EPN VW TLL +CR+H N ++ E A +I E + +Y+LLSN Y SG ++D
Sbjct: 640 MPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDG 699
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
+R K +G+KK G SWI V +H F +G+ + + LEEL L++ + V
Sbjct: 700 LSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDV 759
Query: 695 PD 696
PD
Sbjct: 760 PD 761
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 221/782 (28%), Positives = 367/782 (46%), Gaps = 143/782 (18%)
Query: 1 MRHSLLHQPHQFSPSNPSRPFSI-ITYNNS----------LLDCFD-HLLQQCKTIHQ-- 46
+ HS + +P F+ S P S+ + +S L DC D L+Q KT+H
Sbjct: 37 ITHSAIQKP--FATSGIKTPNSVKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFL 94
Query: 47 LKQV---HNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
LK H+ L++ A A+ + R RN F W +
Sbjct: 95 LKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFS------------WTVL 142
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
+ NGL+ + + + +M+ G+ D F + +++ C + S G +VH ++
Sbjct: 143 IAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIEL----GNMVHAQIV 198
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
GF + + L+ MYAK+ ++ DS+K+F+ + N +SWN M +GF N A +
Sbjct: 199 IRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFD 258
Query: 224 LFKRMELEGLEPNFVTW-----------------------------------TSLLSSHA 248
LF RM EG+ P+ T+ T+L+ ++
Sbjct: 259 LFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNS 318
Query: 249 RCGRLEE---------------------------------TMDLFDMMRKRGIEVGAEAI 275
+CG L+E ++LF M + I +
Sbjct: 319 KCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTY 378
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
V + A L +GK +H IK G E +YV + NA+ Y K G ++ + +F+ +E
Sbjct: 379 CSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRME 438
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
+++++SW +L+T+Y++ D+A+E+F SN R E
Sbjct: 439 DRDLISWTSLVTAYSQCSEWDKAIEIF---------------------------SNMRAE 471
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
+ N T S +L CA L G+++HG + +V ++ + +++ L+
Sbjct: 472 ------------GIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALV 519
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCGCL + VF +I D ++W ++I+G+ +G+ ++AL F M++ G +P+ V
Sbjct: 520 DMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAV 579
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F+ VL ACSH GLV EG + F +M + + + P+MEHYAC+VDLL R G L +A + +
Sbjct: 580 TFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISR 639
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP+EPN VW TLL +CR+H N ++ E A +I E + +Y+LLSN Y SG ++D
Sbjct: 640 MPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDG 699
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
+R K +G+KK G SWI V +H F +G+ + + LEEL L++ + V
Sbjct: 700 LSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDV 759
Query: 695 PD 696
PD
Sbjct: 760 PD 761
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 203/644 (31%), Positives = 346/644 (53%), Gaps = 60/644 (9%)
Query: 26 YNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNV 85
Y + C DHL + KQ+H +L+++ FL ++++S Y++ G + DA NV
Sbjct: 6 YGRLIQHCTDHLFFRVG-----KQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNV 60
Query: 86 FETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY---VKMRKLGVLGDGFTFPLVIRAC 142
F P + + WN++L + ++ + LKL+ V V D FT V A
Sbjct: 61 FGKIP---RKNIFSWNALLISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFT---VTCAL 114
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
K + S + VH+ +L+ G + ++ +VN LI Y++ ++ + +FD++
Sbjct: 115 KALASLFSNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMP---- 170
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
E + V+W ++L+ +++ G E+ +LF +
Sbjct: 171 -------------------------------ERDIVSWNAMLAGYSQGGSYEKCKELFRV 199
Query: 263 MRKRGIEVGAEAIAVV--LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
M +EV A+ V L CA G +H FV + + V + NA+I +Y K
Sbjct: 200 MLS-SLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDVSLWNAVIGLYAKC 258
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
G + A+ LF E+ EK+ +++ ++I+ Y G ++A+++F + ERP + +W
Sbjct: 259 GSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFRE--------QERPRLPTW 310
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+AVI N R E A+D+FR MQ N+VT++ +L V + + L G+EIHG+ +R
Sbjct: 311 NAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIR 370
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
+ ++NI V +++ Y KCG L LVF+QI+ + LI W S+IS Y ++G AL+
Sbjct: 371 NTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSL 430
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F EM+ G +PD V F +VL+AC+H+G ++E +IF++++ E+ I+P +EHYACMV +L
Sbjct: 431 FYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLS 490
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML 620
RAG L +A + + MP+EP A VWG LLN + + ++ + + ++F + E TG+Y++
Sbjct: 491 RAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVI 550
Query: 621 LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
++N+Y+ SGRW+DA +R K LKK+ G SWIE + F
Sbjct: 551 MANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIETSGGMQRF 594
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 210/663 (31%), Positives = 334/663 (50%), Gaps = 80/663 (12%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
K++HQ KQ H L+ G + +L +L F A VF P + L+N
Sbjct: 14 KSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTP---HPNIFLYN 70
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
+++R VSN + +A+ +Y MR+ G D FTFP V++AC + + F G +H+
Sbjct: 71 TLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHY---FHVGLSLHSL 127
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
V++ GF +V + L+ +Y+K G ++D+ K+FD++
Sbjct: 128 VIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIP----------------------- 164
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
E N V+WT+++ + G E + LF + + G+ + + +L
Sbjct: 165 ------------EKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYA 212
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
C+ + G+ I G++ + G VFV +L+ +Y K G +
Sbjct: 213 CSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSM------------------ 254
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
+EA VF DG M +V+ WSA+I +ASNG +EALD+F
Sbjct: 255 -------------EEARRVF------DG--MVEKDVVCWSALIQGYASNGMPKEALDVFF 293
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+MQ V + + G+ S C+ AL +G G + N ++ L++ Y KCG
Sbjct: 294 EMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCG 353
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
+ + VF+ + +KD + +N++ISG M G A F +M++ G +PDG FV +L
Sbjct: 354 SVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLC 413
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
C+HAGLV++G R F M F + P +EHY CMVDL RAGLL EA D++++MPME N+
Sbjct: 414 GCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANS 473
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISA 641
VWG LL CR+HK+T +AE + Q+ L +G Y+LLSNIY+AS RW++A K+R S
Sbjct: 474 IVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSL 533
Query: 642 KTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
KG++K+ G SW+EV +H F G++ + E LE L + G P + +L
Sbjct: 534 NQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLESLFKDLREAGYNPTTEFVL 593
Query: 702 WEM 704
+++
Sbjct: 594 FDV 596
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 203/483 (42%), Gaps = 75/483 (15%)
Query: 8 QPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQV----HNQLIVTGANASA 63
+ H F+P N + PF +L+ C + V H+ +I TG +
Sbjct: 93 RQHGFAPDNFTFPF---------------VLKACTRLPHYFHVGLSLHSLVIKTGFDWDV 137
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM 123
F+ ++ +Y++ G L DAR VF+ P + + + W +I+ + +G + AL L+ +
Sbjct: 138 FVKTGLVCLYSKNGFLTDARKVFDEIP---EKNVVSWTAIICGYIESGCFGEALGLFRGL 194
Query: 124 RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
++G+ D FT ++ AC +G + G+ + ++ + G GNV + L+ MYAK
Sbjct: 195 LEMGLRPDSFTLVRILYACSRVGDL----ASGRWIDGYMRESGSVGNVFVATSLVDMYAK 250
Query: 184 MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
G M ++ ++FD + K+ + W+ + G+A N AL++F M+ E + P+
Sbjct: 251 CGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPD------- 303
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
A+ V S C+ L A +G G + F
Sbjct: 304 ----------------------------CYAMVGVFSACSRLGALELGNWARGLMDGDEF 335
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
+ ALI Y K G V A+ +F + K+ V +NA+I+ A G A VF Q
Sbjct: 336 LSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQ 395
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
+ K+ +P+ ++ ++ G ++ F M V ++ G +
Sbjct: 396 MVKVG----MQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQ 451
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC-LEEGHLVFEQIEKK--DLIT 480
A L + E + + M N +V LL GC L + + E + K+ +L
Sbjct: 452 ARAGLLV--EAQDLIRSMPMEANSIVWGALLG-----GCRLHKDTQLAEHVLKQLIELEP 504
Query: 481 WNS 483
WNS
Sbjct: 505 WNS 507
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 225/763 (29%), Positives = 359/763 (47%), Gaps = 128/763 (16%)
Query: 20 PFSIITY---NNSLLDCFDH--LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLS 71
P ++ Y +D +D+ LLQ C L KQVH ++ G + ++ +L
Sbjct: 12 PADVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLK 71
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+YA G + +AR +F+ F KS + WN ++ GL + A L+ M++ + D
Sbjct: 72 LYAHCGSVNEARQLFDK--FSNKSV-VSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPD 128
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
FTF ++ AC S ++G+ +H V++ G + + N LI MYAK G + D+
Sbjct: 129 KFTFVSILSAC----SSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDAR 184
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
++FD + ++ +S WT+L ++A G
Sbjct: 185 RVFDAMASRDEVS-----------------------------------WTTLTGAYAESG 209
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK----------- 300
EE++ + M + + VLS C LAA GK IH +++
Sbjct: 210 YGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVST 269
Query: 301 ---------GGFEDY-----------VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
G F+D V N +I + G ++ A F + E+ +
Sbjct: 270 ALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAP 329
Query: 341 ---------------------------------------WNALITSYAEAGLCDEAVEVF 361
NALI Y++AG +A +VF
Sbjct: 330 DRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVF 389
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
++ K D V+SW+ ++G +A + E+ F++M V AN +T +L
Sbjct: 390 DRMPKRD--------VVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKA 441
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
C+ AL G+EIH VV+ + ++ V N L++MY KCG +E+ VFE + +D++TW
Sbjct: 442 CSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTW 501
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
N++I G G NG G AL +E M G +P+ FV VLSAC LV EGRR F M +
Sbjct: 502 NTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSK 561
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
++ I P +HYACMVD+L RAG L+EA D++ +P++P+A +WG LL +CR+H N ++ E
Sbjct: 562 DYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGE 621
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI 661
A L + G Y+ LS IYAA+G W D AK+R K +G+KK G+SWIE+ ++
Sbjct: 622 RAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEV 681
Query: 662 HMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
H F + + + + LE L QM++ G VPD ++ ++
Sbjct: 682 HSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDL 724
>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 654
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 194/573 (33%), Positives = 305/573 (53%), Gaps = 76/573 (13%)
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
TF L+I +C S S G VH+ ++ G + ++ +LI MY +G + + K+
Sbjct: 76 TFELLINSCIEQNSL----SDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKV 131
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FD+ R K WN +F A+ + L L+ +M G+ N T+T +L +
Sbjct: 132 FDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKA------- 184
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
+ LS+C GK IH +++ G+E +V V L
Sbjct: 185 --------------------CVVSELSICPL----RKGKEIHAHILRHGYEGHVHVMTTL 220
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ VY + G V A ++F G+M
Sbjct: 221 LDVYARFGYVSYASSVF---------------------------------------GAMP 241
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQL--AKVVANSVTISGLLSVCAESAALNIG 431
N++SWSA+I +A N +AL+LF+ M L V N +T+ +L CA AAL G
Sbjct: 242 DKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHG 301
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
+ +H +V+R ++ + V N L+ MY +CG + G VF+ ++K+D+I+WNS+IS YGM+
Sbjct: 302 KLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMH 361
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
GLG+ A+ FE MI G P + F+ VL ACSHAGLV E + +F+ M+ ++RI P+MEH
Sbjct: 362 GLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEH 421
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
YACMVD+LGRA L EA ++++NM +P VWG+LL SCR+H N ++AE ++ +F L
Sbjct: 422 YACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELE 481
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
+ G+Y+LLS+IYA S W D +VR +++GL+K+ SWIEVKRKI+ S
Sbjct: 482 PKNAGNYVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYN 541
Query: 672 SDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
++ +C L L +++N+G VP +++ +++
Sbjct: 542 PQIEELCAFLITLLTEIKNQGYVPQTNVVTYDL 574
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 190/375 (50%), Gaps = 47/375 (12%)
Query: 34 FDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F+ L+ C + L VH++L+ +G + +LA +++++Y G + A VF+
Sbjct: 77 FELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETR 136
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + +WN+I R E+ L LY +M +G+ + FT+ V++AC
Sbjct: 137 ---EKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSIC 193
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H H+L+ G++G+VH++ L+ +YA+ G +S + +F + KN +SW+ M +
Sbjct: 194 PLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIA 253
Query: 211 GFALNFDCDGALELFKRMELEGLE--PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+A N ALELF+ M LE + PN +T S
Sbjct: 254 CYAKNEMPMKALELFQIMMLEACDTVPNPITMVS-------------------------- 287
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
VL CA LAA GK++H +V++ G + + V N LI +YG+ G++ Q
Sbjct: 288 ---------VLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQR 338
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+F +++++++SWN+LI+ Y GL +A+++F + ++ G P+ I++ V+ A +
Sbjct: 339 VFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENM--INRGV--SPSYITFITVLCACS 394
Query: 389 SNGRGEEALDLFRKM 403
G EEA LF M
Sbjct: 395 HAGLVEEAKILFESM 409
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 173/352 (49%), Gaps = 17/352 (4%)
Query: 20 PFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRL 79
P + TY L C L C + + K++H ++ G + +L +YARFG +
Sbjct: 172 PSNRFTYTYVLKACVVSELSICP-LRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYV 230
Query: 80 FDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY--VKMRKLGVLGDGFTFPL 137
A +VF P + + W++++ N + AL+L+ + + + + T
Sbjct: 231 SYASSVFGAMP---DKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVS 287
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
V++AC + + G++VH +VL+ G + ++N LI MY + G++S ++FD +
Sbjct: 288 VLQACASLAALEH----GKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYM 343
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
+ ++ ISWN + S + ++ A+++F+ M G+ P+++T+ ++L + + G +EE
Sbjct: 344 KKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAK 403
Query: 258 DLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
LF+ M+ K I E A ++ + A+ + + I + F+ V +L+
Sbjct: 404 ILFESMLNKYRIHPRMEHYACMVDILG--RANRLDEAIE-LIQNMDFKPGPTVWGSLLGS 460
Query: 317 YGKHGDVKVAQN---LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
H +V++A+ + E+E KN ++ L YA++ + ++ V QLE
Sbjct: 461 CRIHCNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRKQLE 512
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 214/697 (30%), Positives = 347/697 (49%), Gaps = 112/697 (16%)
Query: 9 PHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASA----- 63
PH F+P S F LQ CK+I LKQ+H +I T + A
Sbjct: 15 PHDFNPHKLS---------------FLSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTIS 59
Query: 64 ----FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR-VNVSNGLYENALK 118
L A+ L I R+ A+ P L+N+I+R + SN L
Sbjct: 60 TRLSALCAQSLPIDPRYALSLLAQLRTPNLP--------LYNAIIRGLATSNNDSIEGLV 111
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
+Y +M G++ D +T P V++AC + R G+ VH ++MG +V++ N L+
Sbjct: 112 VYKQMLSKGIVPDNYTIPFVLKACAESRAVRE----GEEVHGQAIKMGLASDVYVSNTLM 167
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
MYA + + K+FD + + V
Sbjct: 168 RMYAVCDVIRSARKVFDT-----------------------------------SPQRDLV 192
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
+WT+++ + + G E + LF M ++ + +VLS CA L +G+ +H ++
Sbjct: 193 SWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYI 252
Query: 299 IKGGFEDY-VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
I+ + VFV NAL+ +Y K GD A+
Sbjct: 253 IRNSNVNLDVFVGNALVDMYLKCGDANFAR------------------------------ 282
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
+VF + M NV+SW+++I A G+ +E+L +FRKMQ V + VT+
Sbjct: 283 -KVFQE--------MPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVA 333
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
+L+ CA L +G+ +H ++ R + + + N L++MY KCG +++ VF+ + +KD
Sbjct: 334 VLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKD 393
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+ ++ +MI G M+G G AL F EM + G +PD V FV VL+ACSH GLV EGR+ F+
Sbjct: 394 VYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFE 453
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNT 597
M + + PQ+EHY CMVDLLGRAGL+ EA + ++NMP+EP+A+V G LL +C++H
Sbjct: 454 DMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKV 513
Query: 598 DVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
++ E++ +I + G+Y+L+SNIY+++ RW DA K+R + K + L+K G S IE+
Sbjct: 514 ELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIEL 573
Query: 658 KRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
IH F G+ +K + ++L+E+ ++N C+
Sbjct: 574 DGVIHEFQKGDKSHPKIKEIYKLLDEIMSHLKNNECL 610
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 202/625 (32%), Positives = 331/625 (52%), Gaps = 87/625 (13%)
Query: 76 FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
F R D +VF WNS++ +G AL + MRKL + +F
Sbjct: 32 FNRYVDKTDVFS------------WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSF 79
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
P I+AC + F G+ H G+Q ++ + + LI MY+ G++ D+ K+FD
Sbjct: 80 PCAIKACSSL----FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFD 135
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ +N +SW M G+ LN + A+ LFK + ++ + ++
Sbjct: 136 EIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDD------------------DD 177
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
M L M + V+S C+ + A + + IH FVIK GF+ V V N L+
Sbjct: 178 AMFLDSM-----------GLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLD 226
Query: 316 VYGKHGD--VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
Y K G+ V VA+ +F +I +K
Sbjct: 227 AYAKGGEGGVAVARKIFDQIVDK------------------------------------- 249
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA-NSVTISGLLSVCAESAALNIGR 432
+ +S+++++ +A +G EA ++FR++ KVV N++T+S +L + S AL IG+
Sbjct: 250 --DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
IH V+R+ + +++V +++MY KCG +E F++++ K++ +W +MI+GYGM+G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHG 367
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
AL F MI++G +P+ + FV+VL+ACSHAGL EG R F+ M F +EP +EHY
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY 427
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
CMVDLLGRAG LQ+A D+++ M M+P++ +W +LL +CR+HKN ++AE +++F L +
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDS 487
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
G YMLLS+IYA +GRW+D +VR+ K +GL K G S +E+ ++H+F G+
Sbjct: 488 SNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHP 547
Query: 673 DLKNVCEVLEELALQMENKGCVPDN 697
+ + E L EL ++ G V +
Sbjct: 548 QREKIYEFLAELNRKLLEAGYVSNT 572
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 178/383 (46%), Gaps = 58/383 (15%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++ C ++ + KQ H Q V G + F+++ ++ +Y+ G+L DAR VF+ P
Sbjct: 79 FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKM------RKLGVLGDGFTFPLVIRACKF 144
K + + W S++R NG +A+ L+ + + D VI AC
Sbjct: 139 ---KRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSR 195
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ--MSDSFKLFDKVRVKNY 202
+ + + +H+ V++ GF V + N L+ YAK G+ ++ + K+FD++ K+
Sbjct: 196 VPA----KGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR 251
Query: 203 ISWNMMFSGFALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
+S+N + S +A + + A E+F+R+ + + + N +T +++L + + G L + D
Sbjct: 252 VSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHD 311
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
+ + G+E D V V ++I +Y K G
Sbjct: 312 QVIRMGLE-----------------------------------DDVIVGTSIIDMYCKCG 336
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
V+ A+ F ++ KN+ SW A+I Y G +A+E+F + +D G RPN I++
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM--IDSGV--RPNYITFV 392
Query: 382 AVIGAFASNGRGEEALDLFRKMQ 404
+V+ A + G E F M+
Sbjct: 393 SVLAACSHAGLHVEGWRWFNAMK 415
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 119/230 (51%), Gaps = 11/230 (4%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGR--LFDARNVFETAPFDCKSSSLLWNSILR 105
+ +H+ +I G + + +L YA+ G + AR +F+ + +NSI+
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI---VDKDRVSYNSIMS 259
Query: 106 VNVSNGLYENALKLYVKMRKLGVLG-DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
V +G+ A +++ ++ K V+ + T V+ A G+ R G+ +H+ V++
Sbjct: 260 VYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRI----GKCIHDQVIR 315
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
MG + +V + +I MY K G++ + K FD+++ KN SW M +G+ ++ ALEL
Sbjct: 316 MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALEL 375
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAE 273
F M G+ PN++T+ S+L++ + G E F+ M+ R G+E G E
Sbjct: 376 FPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLE 425
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 225/692 (32%), Positives = 346/692 (50%), Gaps = 103/692 (14%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L +LS+ RFG + A VF P + WN ++ GL E AL LY +M
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMP---ERDVFSWNVMVGGYGKAGLLEEALDLYHRMM 187
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
GV D +TFP V+R+C + +R G+ VH HVL+ GF V ++N L+ MYAK
Sbjct: 188 WAGVRPDVYTFPCVLRSCGGVPDWRM----GREVHAHVLRFGFAEEVDVLNALMTMYAKC 243
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G + + K+FD + V + ISWN M +G N +C+ LELF M + ++PN +T TS
Sbjct: 244 GDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITS-- 301
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
+ V + +D+ K +HG +K GF
Sbjct: 302 ------------------------------VTVASGLLSDIT---FAKEMHGLAVKRGFA 328
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
V N+LI +Y G + A+ +FS ++ ++ +SW A+I+ Y + G D+A+EV++ +
Sbjct: 329 TDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALM 388
Query: 365 E----------------------KLDGGS-----MERPNVISWSAVIGA----FASNGRG 393
E LD G E +S+ V A +A + R
Sbjct: 389 EVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRI 448
Query: 394 EEALDLFRKMQ------------------------------LAKVVANSVTISGLLSVCA 423
++A+++F+ M LA V NSVT L+ CA
Sbjct: 449 DKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVKPNSVTFIAALAACA 508
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
+ AL G+EIH HV+R + + N L+++Y+KCG F KD+++WN
Sbjct: 509 ATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNI 568
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
MI+G+ +G GE AL+ F +M++ G PD V FVA+L ACS G+V+EG +F M ++
Sbjct: 569 MIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKY 628
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
I P ++HYACMVDLL R G L EA + + MP+ P+A VWG LLN CR+H++ ++ E
Sbjct: 629 SIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELA 688
Query: 604 ASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHM 663
A + L G ++LL ++YA +G W+ A+VR + + KGL +G SW+EVK +H
Sbjct: 689 AKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHA 748
Query: 664 FSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
F + + ++ + VLE + +M+ GC P
Sbjct: 749 FLTDDESHPQIREINTVLEGIYERMKASGCAP 780
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 186/553 (33%), Positives = 314/553 (56%), Gaps = 49/553 (8%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ VH H+ G G ++I N L+ MYAK G + D+ K+FD++ ++ SWN+M SG+
Sbjct: 138 GKQVHAHIKTSGSIG-LYISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVK 196
Query: 215 NFDCDGALELFKRMELEGLEPNF--VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
+ + A LF +M PN +WT+++S + R EE ++L+ +M+K
Sbjct: 197 GGNFEKARNLFDKM------PNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSN 250
Query: 273 E-AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
+ I+ L+ A + + HMGK IHG +++ G +
Sbjct: 251 KCTISSALAASAAIPSLHMGKKIHGHIMRMGLDS-------------------------- 284
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+ V W +L+ Y + G +EA +F ++E+ D V+SW+ +I + NG
Sbjct: 285 -----DEVVWCSLLDMYGKCGSIEEARYIFDKMEERD--------VVSWTTMIHTYLKNG 331
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
R EE LFR + + ++ N T +G+L+ CA+ AA ++G++IH ++VRV + +
Sbjct: 332 RREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAAS 391
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++MY KCG +E VFE + + DL +W S++ GY +G + AL FE ++++G KP
Sbjct: 392 ALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKP 451
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
DG+AF+ VLSAC+HAGLV++G F + + + ++HYAC++DLL RAG EA I
Sbjct: 452 DGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESI 511
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
+ MP++P+ Y+W LL CR+H N ++A+ A +F + E +Y+ L+NIYA++G
Sbjct: 512 INEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFEIEPENPATYVTLANIYASAGMR 571
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
+ A +R + ++G+ K G SWIE++R++H+FS G++ K + E L EL+ +M+
Sbjct: 572 AEEANIRETMDSRGIVKKPGMSWIEIRREVHVFSVGDNSHPKSKEILEYLSELSKRMKEV 631
Query: 692 GCVPDNDIILWEM 704
G VPD + +L ++
Sbjct: 632 GYVPDTNFVLHDV 644
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 181/354 (51%), Gaps = 18/354 (5%)
Query: 250 CG--RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
CG RL E + L + K A +L C A GK +H + G +
Sbjct: 99 CGQSRLREAVQLLYRIEKPY----ASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGL 153
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
++ N L+ +Y K G + A+ +F E+ +++ SWN +I+ Y + G ++A +F ++
Sbjct: 154 YISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNR 213
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV-ANSVTISGLLSVCAESA 426
D SW+A+I + R EEAL+L+R MQ +N TIS L+ A
Sbjct: 214 DN--------FSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIP 265
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
+L++G++IHGH++R+ ++ + +V LL+MY KCG +EE +F+++E++D+++W +MI
Sbjct: 266 SLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIH 325
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
Y NG E A F ++ + P+ F VL+AC+ + G++I MVR +
Sbjct: 326 TYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVR-VGFD 384
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
+ +V + + G ++ A + + +P +P+ + W +LL H D A
Sbjct: 385 SFSSAASALVHMYSKCGDIENAKSVFEILP-QPDLFSWTSLLVGYAQHGQHDKA 437
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 191/424 (45%), Gaps = 88/424 (20%)
Query: 37 LLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFD 92
LL+ C + + + KQVH + +G+ +++ R+L +YA+ G L DA VF E D
Sbjct: 125 LLKFCLKQRALKEGKQVHAHIKTSGS-IGLYISNRLLDMYAKCGSLVDAEKVFDEMVHRD 183
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC---------- 142
S WN ++ V G +E A L+ KM D F++ +I C
Sbjct: 184 LCS----WNIMISGYVKGGNFEKARNLFDKMPNR----DNFSWTAIISGCVQHNRPEEAL 235
Query: 143 ---KFMGSFRFRFS-------------------FGQIVHNHVLQMGFQGNVHIVNELIGM 180
+ M + S G+ +H H+++MG + + L+ M
Sbjct: 236 ELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDM 295
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
Y K G + ++ +FDK+ E + V+W
Sbjct: 296 YGKCGSIEEARYIFDKME-----------------------------------ERDVVSW 320
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
T+++ ++ + GR EE LF + I A VL+ CADLAA+ +GK IH ++++
Sbjct: 321 TTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVR 380
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
GF+ + +AL+ +Y K GD++ A+++F + + ++ SW +L+ YA+ G D+A+
Sbjct: 381 VGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHF 440
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ----LAKVVANSVTIS 416
F L K S +P+ I++ V+ A A G ++ L+ F ++ L + + + I
Sbjct: 441 FELLLK----SGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACII 496
Query: 417 GLLS 420
LL+
Sbjct: 497 DLLA 500
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 215/740 (29%), Positives = 366/740 (49%), Gaps = 62/740 (8%)
Query: 41 CKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLW 100
C + KQ+H Q G F+ + ++ +YA+ G + A +F P + + + W
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP---EQNDVTW 282
Query: 101 NSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
N +L G LKL+ M +L V + FT V++ C + + GQ++H+
Sbjct: 283 NVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQ----GQVIHS 338
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
+++ G++GN I L+ MY+K G D+ +F ++ + + W+ + + +
Sbjct: 339 LIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEE 398
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
+++LF M L PN T SLLS+ G L+ + + K G E +++
Sbjct: 399 SIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVT 458
Query: 281 VCADLAADHMGKVIHGFVIK----------GGFED-----------------------YV 307
+ H G ++ ++ G D Y
Sbjct: 459 MYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYT 518
Query: 308 FVK--NALICVYGKHGDVKVAQNLF-SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
F+ + C++ H +V ++ +++++ N V ALI YA+ ++A F++L
Sbjct: 519 FISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVC-TALIDMYAKCMYLEDADVAFNRL 577
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
D + +W+ +I +A +GE+AL+ FR+MQ V N T++G LS C+
Sbjct: 578 SVRD--------LFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSS 629
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
A+L G+++H V + ++ V + L++MY KCGC+EE +FE + ++D I WN++
Sbjct: 630 LASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTI 689
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I GY NG G AL F M++ G PDGV F +LSACSH GLV EG+ F+ M R+F
Sbjct: 690 ICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFG 749
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
I P ++H ACMVD+LGR G E D ++ M + NA +W T+L + +MH N + E A
Sbjct: 750 ISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAA 809
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
+++F L E SY+LLSNI+A GRW+D +VR +KG+KK G SW+E ++H F
Sbjct: 810 NKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTF 869
Query: 665 SSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNI--- 721
S + ++ + L+EL ++ + VP + +L +G+ K R ++ +
Sbjct: 870 VSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVL-HNVGETEKKENLRFHSERLALG 928
Query: 722 ------KSKHRIVGFRNLKL 735
S+ +I F+NL++
Sbjct: 929 FALISTSSEKKIRIFKNLRI 948
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 195/439 (44%), Gaps = 86/439 (19%)
Query: 37 LLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L+ C LKQ +H+ +I G + F+ ++ +Y++ G DA VF+T
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIK--- 376
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K ++W++++ G E ++KL+ MR L + +T ++ A G+ ++
Sbjct: 377 KPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQY--- 433
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
GQ +H V + GF+ +V + N L+ MY K G + D KL++ + ++ ISWN SG
Sbjct: 434 -GQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGL- 491
Query: 214 LNFDC---DGALELFKRMELEGLEPNFVTWTSLLSS------------------------ 246
DC D L +F M EG PN T+ S+L S
Sbjct: 492 --HDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDD 549
Query: 247 -----------HARCGRLEE-------------------------------TMDLFDMMR 264
+A+C LE+ ++ F M+
Sbjct: 550 NNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQ 609
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
+ G++ +A LS C+ LA+ G+ +H V K G +FV +AL+ +Y K G ++
Sbjct: 610 QEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCME 669
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A+ LF + ++ ++WN +I YA+ G ++A+ F + LD G P+ ++++ ++
Sbjct: 670 EAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMM--LDEGI--SPDGVTFTGIL 725
Query: 385 GAFASNGRGEEALDLFRKM 403
A + G EE + F M
Sbjct: 726 SACSHQGLVEEGKEHFNSM 744
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 188/421 (44%), Gaps = 68/421 (16%)
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
+ + V+WT+L+ G +++ LF M+ GI +A L C+ A +GK
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
+H K G +FV +AL+ +Y K G++++A +F + E+N V+WN L+ YA+ G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 354 CDEAVEVFSQLEKLD-----------------GGSMERPNVIS--------------WSA 382
+++F + +LD ++++ VI
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS-------------------------- 416
++ ++ G +A+ +F+ ++ +V S I+
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414
Query: 417 -----GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
LLS + L G+ IH V + ++ V N L+ MYMK GC+ +G ++E
Sbjct: 415 QYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYE 474
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
+ +DLI+WN+ +SG G+ + L F M+E GF P+ F+++L +CS V+
Sbjct: 475 SMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHY 534
Query: 532 GRRIFDMMVREFRIEPQMEHYAC--MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
GR++ +++ + ++ C ++D+ + L++A D+ N + + W ++
Sbjct: 535 GRQVHAHIIKN---QLDDNNFVCTALIDMYAKCMYLEDA-DVAFNRLSVRDLFTWTVIIT 590
Query: 590 S 590
+
Sbjct: 591 N 591
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 127/250 (50%), Gaps = 12/250 (4%)
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
W +L+ YA+ +S +L M +V+SW+A+I + G +++ LF
Sbjct: 150 WVSLVNVYAKCR--------YSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLF 201
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
++MQ ++ N T++ L C+ AL++G+++H ++ + ++ V + L+++Y KC
Sbjct: 202 QEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKC 261
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
G +E +F + +++ +TWN +++GY G L F M+E K + VL
Sbjct: 262 GEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVL 321
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC-MVDLLGRAGLLQEASDIVKNMPMEP 579
C+++ + +G+ I ++++ E E C +VD+ + GL +A + K + +P
Sbjct: 322 KGCANSKNLKQGQVIHSLIIK-CGYEGN-EFIGCGLVDMYSKCGLAIDAIGVFKTIK-KP 378
Query: 580 NAYVWGTLLN 589
+ VW L+
Sbjct: 379 DIVVWSALIT 388
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
S +L CA +L + + IHG +V+ +N + + L+N+Y KC LV ++
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
+D+++W ++I G G +++ F+EM G P+ L ACS ++ G++
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ- 234
Query: 536 FDMMVREFRIEPQMEHY--ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
M + F++ ++ + + +VDL + G ++ AS + MP E N W LLN
Sbjct: 235 --MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLLN 287
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 212/663 (31%), Positives = 337/663 (50%), Gaps = 83/663 (12%)
Query: 38 LQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD-- 92
L C +I L ++H L+ G ++ FL + ++ +Y + G + +A NVFE +
Sbjct: 149 LSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNEL 208
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ +WN ++ VSN AL+L+V+M +LG+ D T +V+ C S
Sbjct: 209 VGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLC----SQLLDL 264
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
+ G+ +H +L +G +V + L+ MY K G S ++F + + N + W +
Sbjct: 265 AVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNC 324
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
A N + ALE F L+ P+ V
Sbjct: 325 AQNGYPNEALEFFSEFMLDCGFPDPVI--------------------------------- 351
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ L C+ L+ G IHGF IK GF+ VFV AL+ YGK GD++ AQ +F
Sbjct: 352 --LLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYG 409
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ + +++SW+A+I FA N
Sbjct: 410 LSTR---------------------------------------DLVSWNALISGFAQNKC 430
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
+EAL FR MQ ++ N+VT++ +LSVC + + + +E+H +++R N LV N
Sbjct: 431 ADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNS 490
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++ Y KCG + VFE++ ++ +TWNS++ G+GM+G + ATFE+M EA KPD
Sbjct: 491 LISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPD 550
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
F ++LS+CSH+G V+ G + F+ M+ ++ +EP++E Y CMVDLLGRAG L +A D++
Sbjct: 551 HGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLI 610
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
+MP P+ +WG+LL SC+ H NT +AE +A+ IF L + G +LL+N+Y SG
Sbjct: 611 MSMPCSPDDRIWGSLLASCKNHGNTKLAEVVANHIFELDASSVGYRVLLANLYEDSGNLN 670
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
+ +VR K GLKK G SWIEV IH+F +G+ ++ +E L+L+M+ G
Sbjct: 671 EVFRVRTDIKQMGLKKQPGCSWIEVDNSIHIFVAGDYSHDRSGDIYATIESLSLEMKRVG 730
Query: 693 CVP 695
VP
Sbjct: 731 YVP 733
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 215/740 (29%), Positives = 366/740 (49%), Gaps = 62/740 (8%)
Query: 41 CKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLW 100
C + KQ+H Q G F+ + ++ +YA+ G + A +F P + + + W
Sbjct: 226 CMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP---EQNDVTW 282
Query: 101 NSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
N +L G LKL+ M +L V + FT V++ C + + GQ++H+
Sbjct: 283 NVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQ----GQVIHS 338
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
+++ G++GN I L+ MY+K G D+ +F ++ + + W+ + + +
Sbjct: 339 LIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEE 398
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
+++LF M L PN T SLLS+ G L+ + + K G E +++
Sbjct: 399 SIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVT 458
Query: 281 VCADLAADHMGKVIHGFVIK----------GGFED-----------------------YV 307
+ H G ++ ++ G D Y
Sbjct: 459 MYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYT 518
Query: 308 FVK--NALICVYGKHGDVKVAQNLF-SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
F+ + C++ H +V ++ +++++ N V ALI YA+ ++A F++L
Sbjct: 519 FISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVC-TALIDMYAKCMYLEDADVAFNRL 577
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
D + +W+ +I +A +GE+AL+ FR+MQ V N T++G LS C+
Sbjct: 578 SVRD--------LFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSS 629
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
A+L G+++H V + ++ V + L++MY KCGC+EE +FE + ++D I WN++
Sbjct: 630 LASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTI 689
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I GY NG G AL F M++ G PDGV F +LSACSH GLV EG+ F+ M R+F
Sbjct: 690 ICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFG 749
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
I P ++H ACMVD+LGR G E D ++ M + NA +W T+L + +MH N + E A
Sbjct: 750 ISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAA 809
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
+++F L E SY+LLSNI+A GRW+D +VR +KG+KK G SW+E ++H F
Sbjct: 810 NKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTF 869
Query: 665 SSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNI--- 721
S + ++ + L+EL ++ + VP + +L +G+ K R ++ +
Sbjct: 870 VSHDYSHPQIQEIHLKLDELDRELASIQYVPKTEYVL-HNVGETEKKENLRFHSERLALG 928
Query: 722 ------KSKHRIVGFRNLKL 735
S+ +I F+NL++
Sbjct: 929 FALISTSSEKKIRIFKNLRI 948
Score = 137 bits (345), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 195/439 (44%), Gaps = 86/439 (19%)
Query: 37 LLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L+ C LKQ +H+ +I G + F+ ++ +Y++ G DA VF+T
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIK--- 376
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K ++W++++ G E ++KL+ MR L + +T ++ A G+ ++
Sbjct: 377 KPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQY--- 433
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
GQ +H V + GF+ +V + N L+ MY K G + D KL++ + ++ ISWN SG
Sbjct: 434 -GQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGL- 491
Query: 214 LNFDC---DGALELFKRMELEGLEPNFVTWTSLLSS------------------------ 246
DC D L +F M EG PN T+ S+L S
Sbjct: 492 --HDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDD 549
Query: 247 -----------HARCGRLEE-------------------------------TMDLFDMMR 264
+A+C LE+ ++ F M+
Sbjct: 550 NNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQ 609
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
+ G++ +A LS C+ LA+ G+ +H V K G +FV +AL+ +Y K G ++
Sbjct: 610 QEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCME 669
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A+ LF + ++ ++WN +I YA+ G ++A+ F + LD G P+ ++++ ++
Sbjct: 670 EAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMM--LDEGI--SPDGVTFTGIL 725
Query: 385 GAFASNGRGEEALDLFRKM 403
A + G EE + F M
Sbjct: 726 SACSHQGLVEEGKEHFNSM 744
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 188/421 (44%), Gaps = 68/421 (16%)
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
+ + V+WT+L+ G +++ LF M+ GI +A L C+ A +GK
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ 234
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
+H K G +FV +AL+ +Y K G++++A +F + E+N V+WN L+ YA+ G
Sbjct: 235 MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGD 294
Query: 354 CDEAVEVFSQLEKLD-----------------GGSMERPNVIS--------------WSA 382
+++F + +LD ++++ VI
Sbjct: 295 VTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCG 354
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS-------------------------- 416
++ ++ G +A+ +F+ ++ +V S I+
Sbjct: 355 LVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPN 414
Query: 417 -----GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
LLS + L G+ IH V + ++ V N L+ MYMK GC+ +G ++E
Sbjct: 415 QYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYE 474
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
+ +DLI+WN+ +SG G+ + L F M+E GF P+ F+++L +CS V+
Sbjct: 475 SMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHY 534
Query: 532 GRRIFDMMVREFRIEPQMEHYAC--MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
GR++ +++ + ++ C ++D+ + L++A D+ N + + W ++
Sbjct: 535 GRQVHAHIIKN---QLDDNNFVCTALIDMYAKCMYLEDA-DVAFNRLSVRDLFTWTVIIT 590
Query: 590 S 590
+
Sbjct: 591 N 591
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 127/250 (50%), Gaps = 12/250 (4%)
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
W +L+ YA+ +S +L M +V+SW+A+I + G +++ LF
Sbjct: 150 WVSLVNVYAKCR--------YSAYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLF 201
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
++MQ ++ N T++ L C+ AL++G+++H ++ + ++ V + L+++Y KC
Sbjct: 202 QEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKC 261
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
G +E +F + +++ +TWN +++GY G L F M+E K + VL
Sbjct: 262 GEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVL 321
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC-MVDLLGRAGLLQEASDIVKNMPMEP 579
C+++ + +G+ I ++++ E E C +VD+ + GL +A + K + +P
Sbjct: 322 KGCANSKNLKQGQVIHSLIIK-CGYEGN-EFIGCGLVDMYSKCGLAIDAIGVFKTIK-KP 378
Query: 580 NAYVWGTLLN 589
+ VW L+
Sbjct: 379 DIVVWSALIT 388
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
S +L CA +L + + IHG +V+ +N + + L+N+Y KC LV ++
Sbjct: 116 SSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPD 175
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
+D+++W ++I G G +++ F+EM G P+ L ACS ++ G++
Sbjct: 176 RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQ- 234
Query: 536 FDMMVREFRIEPQMEHY--ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
M + F++ ++ + + +VDL + G ++ AS + MP E N W LLN
Sbjct: 235 --MHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMP-EQNDVTWNVLLN 287
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 209/667 (31%), Positives = 346/667 (51%), Gaps = 86/667 (12%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++++ C ++ + + VH+++ G F+ + ++ Y+ G + DAR +F+ P
Sbjct: 150 FPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP 209
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+LWN +L V NG ++NA ++++MR+ + TF V+ C +
Sbjct: 210 ---SKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVC----ASEI 262
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNE--LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
+FG +H V+ G + + + N LI +Y K + + K+FD+ + + M
Sbjct: 263 MINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAM 322
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
SG+ LN + ALE+F+ + E + N VT
Sbjct: 323 ISGYVLNGMNNNALEIFRWLLQERMRANSVT----------------------------- 353
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
+A VL CA LAA +GK +HG ++K G +V +A++ +Y K G + +A
Sbjct: 354 ------LASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQ 407
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
F I +K+ + W+++I + +
Sbjct: 408 TFIGISDKD---------------------------------------AVCWNSMITSCS 428
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
NG+ EEA+DLFR+M +A + V+IS LS CA AL+ G+EIH ++R + ++
Sbjct: 429 QNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLF 488
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
++ L++MY KCG L+ VF+ +E+K+ ++WNS+I+ YG +G +++L F M+ G
Sbjct: 489 AESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDG 548
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+PD V F+A++SAC HAG V+EG F M E I +MEHYACMVDL GRAG L EA
Sbjct: 549 IQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEA 608
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
++ +MP P+A VWGTLL +CR+H N ++AE + +F L + +G Y+LLSN++A +
Sbjct: 609 FGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANA 668
Query: 629 GRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
G+WE K+R K +G++KV G SWI+V HMF + + + +L+ L L++
Sbjct: 669 GQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLEL 728
Query: 689 ENKGCVP 695
+G VP
Sbjct: 729 RKEGYVP 735
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 167/580 (28%), Positives = 266/580 (45%), Gaps = 91/580 (15%)
Query: 16 NPSRPFSIITYNN-SLLDCFDHLLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLS 71
N +P +N+ SL +LQ C + Q +Q H Q++V G + L ++L
Sbjct: 30 NIGKPLQFSIHNDDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLG 89
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+Y G DA+N+F C WN ++R G ++ AL Y KM G L D
Sbjct: 90 MYVLCGAFLDAKNIFYQLRLWCSEP---WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPD 146
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
+TFP VI+AC + S + G++VH+ + MGF+ +V + + LI Y++ G + D+
Sbjct: 147 KYTFPYVIKACGGLNSV----ALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDAR 202
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
LFD++ K DG L W +L+ + + G
Sbjct: 203 YLFDRMPSK------------------DGVL-----------------WNVMLNGYVKNG 227
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
+ +F MR+ + A VLSVCA + G +HG V+ G E V N
Sbjct: 228 DWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVAN 287
Query: 312 --ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
ALI +Y K DV++A+ +F + +IV +C
Sbjct: 288 TFALIDIYFKCRDVEMARKIFDQRTPVDIV-------------VC--------------- 319
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
+A+I + NG AL++FR + ++ ANSVT++ +L CA AAL
Sbjct: 320 -----------TAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALT 368
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
+G+E+HGH+++ + V + +++MY KCG L+ H F I KD + WNSMI+
Sbjct: 369 LGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCS 428
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR-EFRIEPQ 548
NG E A+ F +M AG K D V+ A LSAC++ ++ G+ I M+R FR +
Sbjct: 429 QNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLF 488
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
E + ++D+ + G L A + M E N W +++
Sbjct: 489 AE--SALIDMYSKCGNLDLACRVFDTME-EKNEVSWNSII 525
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 170/363 (46%), Gaps = 34/363 (9%)
Query: 27 NNSLLDCFDHLLQQ---------------CKTIHQL---KQVHNQLIVTGANASAFLAAR 68
NN+ L+ F LLQ+ C + L K++H ++ G S ++ +
Sbjct: 332 NNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSA 391
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++ +YA+ GRL A F ++ WNS++ NG E A+ L+ +M G
Sbjct: 392 IMDMYAKCGRLDLAHQTFIGIS---DKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGT 448
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D + + AC + + + G+ +H +++ F+ ++ + LI MY+K G +
Sbjct: 449 KYDCVSISAALSACANLPALHY----GKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLD 504
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ ++FD + KN +SWN + + + + +L LF M +G++P+ VT+ +++S+
Sbjct: 505 LACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACG 564
Query: 249 RCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
G+++E + F M + GI E A ++ + A + + G + F
Sbjct: 565 HAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFG--RAGRLNEAF-GMINSMPFSPDA 621
Query: 308 FVKNALICVYGKHGDVKVAQ----NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
V L+ HG+V++A+ NLF +++ +N + L +A AG + +++ S
Sbjct: 622 GVWGTLLGACRLHGNVELAEVASRNLF-DLDPQNSGYYVLLSNVHANAGQWESVLKIRSL 680
Query: 364 LEK 366
+++
Sbjct: 681 MKE 683
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 2/172 (1%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
+L C + + L+ GR+ H ++ + N ++ LL MY+ CG + +F Q+
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
WN MI G+ M G + AL + +M+ G PD F V+ AC V GR + D
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
++ E + + ++ G + +A + MP + + +W +LN
Sbjct: 172 -KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSK-DGVLWNVMLN 221
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 352 bits (902), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 201/646 (31%), Positives = 334/646 (51%), Gaps = 81/646 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+QVH +I ++ +L++YA+ G + DA+ VF+ L N+++
Sbjct: 669 RQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQV---LDKEVELRNAMISAF 725
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+ NG +AL LY KM+ D FT ++ C +GS+ FG+ VH V++
Sbjct: 726 IGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSY----DFGRTVHAEVIKRSM 781
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
Q NV I + L+ MY K G D+ +F ++
Sbjct: 782 QSNVAIQSALLTMYYKCGSTEDADSVFYTMK----------------------------- 812
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
E + V W S+++ + R ++ +DLF M K G++ ++ + V+S L
Sbjct: 813 ------ERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLEN 866
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+G +IHGF IK G E VFV +L+ +Y K G + A+ +FS
Sbjct: 867 VELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFS---------------- 910
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
SM N+++W+++I ++ NG E +++L ++
Sbjct: 911 -----------------------SMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHG 947
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
+SV+I+ +L + AAL G+ +H + +R+ + ++ V+N L++MY+KCGCL+
Sbjct: 948 FYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQ 1007
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
L+FE + +++L+TWNSMI+GYG +G E A+ F+EM + PD V F+A++++CSH+G
Sbjct: 1008 LIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSG 1067
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
+V EG +F +M E+ +EP+MEHYA +VDLLGRAG L +A ++ MP++ + VW L
Sbjct: 1068 MVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCL 1127
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
L +CR H+N ++ E +A + + +Y+ L N+Y W+ AA +R S K +GLK
Sbjct: 1128 LFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLK 1187
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
K G SWIEVK ++ +F SG+S + + + L L ME KGC
Sbjct: 1188 KSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKGC 1233
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 220/488 (45%), Gaps = 80/488 (16%)
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
++ V G Y AL+L+ K + FTFP +++ C + + G+ +H ++
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYH----GRTIHASIV 468
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
MG Q + +I LI MY K G + + ++FDK+
Sbjct: 469 TMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMS------------------------- 503
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
E P+ W ++ + + G EE + F M++ GI ++++VL +C
Sbjct: 504 -----ESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICN 558
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
L+ G+ IHG++I+ FE +++ ALI +Y
Sbjct: 559 RLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSS------------------------ 594
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR-- 401
C +E +S KL+ R N+++W+ +IG F NG E++L+L+
Sbjct: 595 ----------CSRPMEAWSLFGKLE----NRSNIVAWNVMIGGFVENGMWEKSLELYSLA 640
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
K + K+V+ S T G + C+ L+ GR++H V++++ + V LL MY K G
Sbjct: 641 KNENCKLVSASFT--GAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSG 698
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP-DGVAFVAVL 520
+E+ VF+Q+ K++ N+MIS + NG +AL + +M +AG P D ++L
Sbjct: 699 SVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKM-KAGETPVDSFTISSLL 757
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
S CS G + GR + +++ ++ + + ++ + + G ++A + M E +
Sbjct: 758 SGCSVVGSYDFGRTVHAEVIKR-SMQSNVAIQSALLTMYYKCGSTEDADSVFYTMK-ERD 815
Query: 581 AYVWGTLL 588
WG+++
Sbjct: 816 VVAWGSMI 823
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 172/372 (46%), Gaps = 49/372 (13%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LL C + + VH ++I ++ + + +L++Y + G DA +VF T
Sbjct: 756 LLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMK--- 812
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + W S++ N +++AL L+ M K GV D VI A G
Sbjct: 813 ERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISA----GLGLENVE 868
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G ++H ++ G + +V + L+ MY+K G + +F + KN
Sbjct: 869 LGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKN------------ 916
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
V W S++S ++ G E +++L + + G + +
Sbjct: 917 -----------------------LVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSV 953
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+I VL + +AA GK +H + I+ + V+NALI +Y K G +K AQ +F +
Sbjct: 954 SITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENM 1013
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
+N+V+WN++I Y G C+EAV +F ++++ S P+ +++ A+I + + +G
Sbjct: 1014 PRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKR----SETAPDEVTFLALITSCSHSGMV 1069
Query: 394 EEALDLFRKMQL 405
EE L+LF+ M++
Sbjct: 1070 EEGLNLFQLMRI 1081
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 352 bits (902), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 208/702 (29%), Positives = 356/702 (50%), Gaps = 98/702 (13%)
Query: 2 RHSLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANA 61
R+ L +PH S NP+R +L D F+ LLQQC +I QLKQ+H QL+ +
Sbjct: 13 RYLNLQKPH--SKPNPNR--------QALSDKFNSLLQQCLSIKQLKQIHAQLLTNSIHK 62
Query: 62 SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR-VNVSNGLYENALKLY 120
++ + + F +VF + D S +N ++R ++ + AL+ Y
Sbjct: 63 PNSFLYKIADL-----KDFAYASVFFSNILDPTEYS--FNVMIRGLSTAWNKSSLALEFY 115
Query: 121 VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
+M+ LG+ + T+P + AC S G++ H V++ G + H+ + LI M
Sbjct: 116 SRMKFLGLKPNNLTYPFLFIAC----SNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITM 171
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
YA+ G+M D+ K+FD++ K+ V+W
Sbjct: 172 YARCGKMGDARKVFDEISQKD-----------------------------------LVSW 196
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
S++S +++ E + LF M + G + ++ VL C +L +G + FV++
Sbjct: 197 NSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVE 256
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
F+ +ALI +YGK GD+ A+ +F
Sbjct: 257 NKMTLNYFMGSALIHMYGKCGDLVSARRIFD----------------------------- 287
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
SM++ + ++W+A+I +A NG EEA+ LF+ M+++ + +T+ G+LS
Sbjct: 288 ----------SMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILS 337
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
CA AL++G+++ + ++ V L++MY KCG L+ VF + K+ ++
Sbjct: 338 ACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVS 397
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAG--FKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
WN+MIS +G + ALA F+ M+ G P+ + FV VLSAC HAGLV+EGRR+F M
Sbjct: 398 WNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHM 457
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
M F + P++EHY+CMVDL RAG L+EA D V MP +P+ + G LL +C+ KN D
Sbjct: 458 MSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNID 517
Query: 599 VAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
++E + + L +G+Y++ S +YA RW+D+A++R+ K KG+ K G SWI++
Sbjct: 518 ISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDIN 577
Query: 659 RKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
++H F +G+ L + + ++L+ L + +G +P+ +++
Sbjct: 578 SQLHEFHAGDVLHQEWIEIHQILDLLIDDLRREGYIPNANLL 619
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 352 bits (902), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 201/646 (31%), Positives = 334/646 (51%), Gaps = 81/646 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+QVH +I ++ +L++YA+ G + DA+ VF+ L N+++
Sbjct: 264 RQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQV---LDKEVELRNAMISAF 320
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+ NG +AL LY KM+ D FT ++ C +GS+ FG+ VH V++
Sbjct: 321 IGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSY----DFGRTVHAEVIKRSM 376
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
Q NV I + L+ MY K G D+ +F ++
Sbjct: 377 QSNVAIQSALLTMYYKCGSTEDADSVFYTMK----------------------------- 407
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
E + V W S+++ + R ++ +DLF M K G++ ++ + V+S L
Sbjct: 408 ------ERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLEN 461
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+G +IHGF IK G E VFV +L+ +Y K G + A+ +FS
Sbjct: 462 VELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFS---------------- 505
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
SM N+++W+++I ++ NG E +++L ++
Sbjct: 506 -----------------------SMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHG 542
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
+SV+I+ +L + AAL G+ +H + +R+ + ++ V+N L++MY+KCGCL+
Sbjct: 543 FYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQ 602
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
L+FE + +++L+TWNSMI+GYG +G E A+ F+EM + PD V F+A++++CSH+G
Sbjct: 603 LIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSG 662
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
+V EG +F +M E+ +EP+MEHYA +VDLLGRAG L +A ++ MP++ + VW L
Sbjct: 663 MVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCL 722
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
L +CR H+N ++ E +A + + +Y+ L N+Y W+ AA +R S K +GLK
Sbjct: 723 LFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLK 782
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
K G SWIEVK ++ +F SG+S + + + L L ME KGC
Sbjct: 783 KSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKGC 828
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 142/612 (23%), Positives = 281/612 (45%), Gaps = 82/612 (13%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE--T 88
F LL+ C ++ L + +H ++ G + ++A ++++Y + G L A VF+ +
Sbjct: 58 FPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMS 117
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
D +WN ++ G +E L + +M++L
Sbjct: 118 ESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELS--------------------- 156
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNM 207
+ G+ +H ++++ F+G+ ++ LIGMY+ + +++ LF K+ + N ++WN+
Sbjct: 157 --WYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNV 214
Query: 208 MFSGFALNFDCDGALELF-------------------------------KRMELEGLEPN 236
M GF N + +LEL+ +++ + ++ N
Sbjct: 215 MIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMN 274
Query: 237 F----VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
F TSLL+ +A+ G +E+ +FD + + +E+ I+ + A D +G
Sbjct: 275 FQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIG--NGRAYDALG- 331
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK----NIVSWNALITSY 348
++ + G F ++L+ G + + +E+ ++ N+ +AL+T Y
Sbjct: 332 -LYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMY 390
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+ G ++A VF +++ D V++W ++I F N R ++ALDLFR M+ V
Sbjct: 391 YKCGSTEDADSVFYTMKERD--------VVAWGSMIAGFCQNRRFKDALDLFRAMEKEGV 442
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
A+S ++ ++S + +G IHG ++ + ++ V L++MY K G E +
Sbjct: 443 KADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEM 502
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
VF + K+L+ WNSMIS Y NGL E ++ ++++ GF D V+ VL A S
Sbjct: 503 VFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAA 562
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ +G+ + +R +I ++ ++D+ + G L+ A I +NMP N W +++
Sbjct: 563 LLKGKTLHAYQIR-LQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRR-NLVTWNSMI 620
Query: 589 NSCRMHKNTDVA 600
H N + A
Sbjct: 621 AGYGSHGNCEEA 632
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 138/558 (24%), Positives = 239/558 (42%), Gaps = 127/558 (22%)
Query: 101 NSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
NS ++ V G Y AL+L+ K + FTFP +++ C + + G+ +H
Sbjct: 24 NSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYH----GRTIHA 79
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
++ MG Q + +I LI MY K G + + ++FDK+
Sbjct: 80 SIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMS---------------------- 117
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
E P+ W ++ + + G EE + F M+
Sbjct: 118 --------ESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQ---------------- 153
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK-NIV 339
+L+ G+ IHG++I+ FE +++ ALI +Y A +LF ++E + NIV
Sbjct: 154 ---ELSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIV 210
Query: 340 SWNALITSYAEAGLCDEAVEVF----------------------SQLEKLDGGSMERPNV 377
+WN +I + E G+ ++++E++ S E LD G +V
Sbjct: 211 AWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDV 270
Query: 378 ISW---------SAVIGAFASNGRGEEA-------------------------------L 397
I ++++ +A +G E+A L
Sbjct: 271 IKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDAL 330
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
L+ KM+ + +S TIS LLS C+ + + GR +H V++ SM N+ +Q+ LL MY
Sbjct: 331 GLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMY 390
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG E+ VF ++++D++ W SMI+G+ N ++AL F M + G K D
Sbjct: 391 YKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMT 450
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH---YAC-MVDLLGRAGLLQEASDIVK 573
+V+S AGL E + ++ F I+ +E AC +VD+ + G + A +
Sbjct: 451 SVIS----AGLGLENVEL-GHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFS 505
Query: 574 NMPMEPNAYVWGTLLNSC 591
+MP N W +++ SC
Sbjct: 506 SMP-NKNLVAWNSMI-SC 521
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 174/372 (46%), Gaps = 49/372 (13%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LL C + + VH ++I ++ + + +L++Y + G DA +VF T
Sbjct: 351 LLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMK--- 407
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + W S++ N +++AL L+ M K GV D VI A G
Sbjct: 408 ERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISA----GLGLENVE 463
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G ++H ++ G + +V + L+ MY+K G FA
Sbjct: 464 LGHLIHGFAIKRGLESDVFVACSLVDMYSKFG--------------------------FA 497
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ A +F M N V W S++S ++ G E +++L + + G + +
Sbjct: 498 -----ESAEMVFSSMP----NKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSV 548
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+I VL + +AA GK +H + I+ + V+NALI +Y K G +K AQ +F +
Sbjct: 549 SITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENM 608
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
+N+V+WN++I Y G C+EAV +F ++++ S P+ +++ A+I + + +G
Sbjct: 609 PRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKR----SETAPDEVTFLALITSCSHSGMV 664
Query: 394 EEALDLFRKMQL 405
EE L+LF+ M++
Sbjct: 665 EEGLNLFQLMRI 676
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 351 bits (901), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 210/707 (29%), Positives = 357/707 (50%), Gaps = 107/707 (15%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L ++++ +Y + G + AR VF+ P K + +WN I+ +E +L L+ +M
Sbjct: 345 LGSKLVFMYVKCGDMGSARRVFDAMP--SKGNVHVWNLIMGGYAKAAEFEESLLLFEQMH 402
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
+LG+ D +++ + R G + H +++++GF + N LI YAK
Sbjct: 403 ELGITPDEHALSCLLKCITCLSCARD----GLVAHGYLVKLGFGTQCAVCNALISFYAKS 458
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
+ ++ +FD++ ++ IS W S++
Sbjct: 459 NMIDNAVLVFDRMPHQDTIS-----------------------------------WNSVI 483
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
S G E ++LF M +G E+ + + VL CA +G+V+HG+ +K G
Sbjct: 484 SGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLI 543
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEA-------GLCDEA 357
+ NAL+ +Y D +F + +KN+VSW A+ITSY A GL E
Sbjct: 544 GETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEM 603
Query: 358 V------EVFSQLEKLDG-------------------GSMER------------------ 374
V +VF+ L G ME+
Sbjct: 604 VLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNM 663
Query: 375 ------------PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
++ISW+ +IG ++ N E+ LF M L + N+VT++ +L
Sbjct: 664 EEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDM-LLQFKPNTVTMTCILPAV 722
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A ++L GREIH + +R ++ N L++MY+KCG L ++F+++ KK+LI+W
Sbjct: 723 ASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWT 782
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
MI+GYGM+G G++A+A FE+M +G +PD +F A+L AC H+GL EG + F+ M +E
Sbjct: 783 IMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKE 842
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
++IEP+++HY C+VDLL G L+EA + +++MP+EP++ +W +LL+ CR+H++ +AE
Sbjct: 843 YKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEK 902
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
+A ++F L E TG Y+LL+NIYA + RWE K++ +GL++ G SWIEV+ K+H
Sbjct: 903 VADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVH 962
Query: 663 MFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKN 709
+F + N + + E L+ +A +M +G P + +MG +
Sbjct: 963 VFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKK---YSLMGAND 1006
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 172/387 (44%), Gaps = 72/387 (18%)
Query: 227 RMELEGLEPNFV---TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
RM + + P WTSL+S++A+ G +E + LF M+ G+ A A++ VL A
Sbjct: 150 RMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIA 209
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
L + G+VIHG + K G + V NALI +Y + G ++ A +F + ++ +SWN+
Sbjct: 210 SLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNS 269
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
I+ Y G D AV++FS++ WS G E
Sbjct: 270 TISGYFSNGWHDRAVDLFSKM---------------WS----------EGTE-------- 296
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL-----VQNG------ 452
+SVT+ +L CAE +G+ +HG+ SM +L VQ+G
Sbjct: 297 ------ISSVTVLSVLPACAELGFELVGKVVHGY----SMKSGLLWDLESVQSGIDEALG 346
Query: 453 --LLNMYMKCGCLEEGHLVFEQIEKK-DLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
L+ MY+KCG + VF+ + K ++ WN ++ GY E +L FE+M E G
Sbjct: 347 SKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGI 406
Query: 510 KPDGVAFVAVLS-----ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
PD A +L +C+ GLV G + + Q ++ ++ +
Sbjct: 407 TPDEHALSCLLKCITCLSCARDGLVAHGYLV------KLGFGTQCAVCNALISFYAKSNM 460
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSC 591
+ A + MP + + W ++++ C
Sbjct: 461 IDNAVLVFDRMPHQ-DTISWNSVISGC 486
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 154/354 (43%), Gaps = 54/354 (15%)
Query: 249 RCGRLEETMDLFDMMRKRGIE--VGAEAIAVVLSVCADLAADHMGKVIHGFVI--KGGFE 304
R RL + DL +R G + VG + V+ +C + + + H V GG
Sbjct: 69 RIQRLCQAGDLAAALRLLGSDGGVGVRSYCAVVQLCGEERSLEAARRAHALVRAGTGGII 128
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
V K L+ Y K GD+ A+ +F E+ +
Sbjct: 129 GSVLGKR-LVLAYLKCGDLGGARMVFDEMPPR---------------------------- 159
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
+V W++++ A+A G +E + LFR+MQ V ++ +S +L A
Sbjct: 160 ---------VADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIAS 210
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
++ G IHG + ++ + + V N L+ +Y +CGC+E+ VF+ + +D I+WNS
Sbjct: 211 LGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNST 270
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI--------- 535
ISGY NG + A+ F +M G + V ++VL AC+ G G+ +
Sbjct: 271 ISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGL 330
Query: 536 -FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+D+ + I+ + + +V + + G + A + MP + N +VW ++
Sbjct: 331 LWDLESVQSGIDEALG--SKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIM 382
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 151/353 (42%), Gaps = 28/353 (7%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
+++ Q K VH I G +A ++ +Y + +AR VF+ + WN
Sbjct: 626 ESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVT---NKDIISWN 682
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
+++ N + L+ M L + T ++ A + S G+ +H +
Sbjct: 683 TLIGGYSRNNFANESFSLFSDML-LQFKPNTVTMTCILPAVASISSLE----RGREIHAY 737
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
L+ GF + + N L+ MY K G + + LFD++ KN ISW +M +G+ ++ A
Sbjct: 738 ALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDA 797
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
+ LF++M G+EP+ +++++L + G E F+ MRK E E +
Sbjct: 798 VALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRK---EYKIEPKLKHYTC 854
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG-----DVKVAQNLFSEI--- 333
DL + H G + F E ++ I V HG DVK+A+ + +
Sbjct: 855 IVDLLS-HTGNLKEAFEF---IESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKL 910
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV-ISWSAVIG 385
E +N + L YAEA E E +L+ GG R N SW V G
Sbjct: 911 EPENTGYYVLLANIYAEA----ERWEAVKKLKNKIGGRGLRENTGCSWIEVRG 959
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 351 bits (901), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 196/577 (33%), Positives = 304/577 (52%), Gaps = 84/577 (14%)
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
T+ L+I C R S G VH H+L G + + +LIGMY+ +G + + K+
Sbjct: 79 TYELLILCC----GHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FDK R + WN +F L G
Sbjct: 135 FDKTRKRTIYVWNALFRALTL-----------------------------------AGHG 159
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVC--ADLAADHM--GKVIHGFVIKGGFEDYVFV 309
EE + L+ M + G+E VL C ++ ADH+ GK IH + + G+ +V++
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYI 219
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
L+ +Y + G V A +F+
Sbjct: 220 MTTLVDMYARFGCVDYASYVFN-------------------------------------- 241
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKM--QLAKVVANSVTISGLLSVCAESAA 427
M NV+SWSA+I +A NG+ EAL FR+M + NSVT+ +L CA AA
Sbjct: 242 -GMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAA 300
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L GR IHG+++R ++ + V + L+ MY +CG L+ G VF+++ +D+++WNS+IS
Sbjct: 301 LEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISS 360
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
YG++G G A+ FEEM+ G P V FV+VL ACSH GLV EG+R+F+ M R+ I+P
Sbjct: 361 YGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKP 420
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
Q+EHYACMVDLLGRA L EA+ +V++M EP VWG+LL SCR+H N ++AE + ++
Sbjct: 421 QVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRL 480
Query: 608 FGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG 667
F L + G+Y+LL++IYA + W++ +V+ + +GL+K+ G+ W+EV+RK++ F S
Sbjct: 481 FALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSM 540
Query: 668 NSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ ++ + L +LA M+ KG +P +L+E+
Sbjct: 541 DEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYEL 577
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 184/357 (51%), Gaps = 44/357 (12%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
+VH ++ G++ FLA +++ +Y+ G + AR VF+ K + +WN++ R
Sbjct: 98 RVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTR---KRTIYVWNALFRALT 154
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
G E L LY KM ++GV D FT+ V++AC + G+ +H H+ + G+
Sbjct: 155 LAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYN 214
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+V+I+ L+ MYA+ G + +Y S+ +F+G +
Sbjct: 215 SHVYIMTTLVDMYARFGCV-------------DYASY--VFNGMPVR------------- 246
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV--LSVCADLA 286
N V+W+++++ +A+ G+ E + F M + ++ +V L CA LA
Sbjct: 247 -------NVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLA 299
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
A G++IHG++++ G + + V +AL+ +YG+ G + V Q +F + ++++VSWN+LI+
Sbjct: 300 ALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLIS 359
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
SY G +A+++F ++ L G+ P +++ +V+GA + G EE LF M
Sbjct: 360 SYGVHGYGRKAIQIFEEM--LANGA--SPTPVTFVSVLGACSHEGLVEEGKRLFESM 412
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 168/351 (47%), Gaps = 25/351 (7%)
Query: 25 TYNNSLLDCFDHLLQQCKTIH--QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDA 82
TY L C + +C H + K++H L G N+ ++ ++ +YARFG + A
Sbjct: 180 TYTYVLKAC---VASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYA 236
Query: 83 RNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM--RKLGVLGDGFTFPLVIR 140
VF P + + W++++ NG AL+ + +M + T V++
Sbjct: 237 SYVFNGMPV---RNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQ 293
Query: 141 ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
AC + + G+++H ++L+ G + +++ L+ MY + G++ ++FD++ +
Sbjct: 294 ACASLAA----LEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDR 349
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
+ +SWN + S + ++ A+++F+ M G P VT+ S+L + + G +EE LF
Sbjct: 350 DVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLF 409
Query: 261 D-MMRKRGIEVGAEAIAVVLSVCADL-AADHMGKVIHGFVIKGGFEDYVFVKNALICVYG 318
+ M R GI+ E A ++ + D K++ + G + V +L+
Sbjct: 410 ESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPK----VWGSLLGSCR 465
Query: 319 KHGDVKVAQ----NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
HG+V++A+ LF+ +E KN ++ L YAEA + DE V LE
Sbjct: 466 IHGNVELAERASRRLFA-LEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLE 515
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 126/291 (43%), Gaps = 20/291 (6%)
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
++ + N + N L S + LC A+ S + G+ + IS + +I +
Sbjct: 7 PQVIQPNYYTVNFLPRSPLKPPLCSVALNNLS----ISSGAGAK---ISNNQLIQSLCKE 59
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
G+ ++AL + + + + T L+ C ++L+ G +H H++ +++ +
Sbjct: 60 GKLKQALRVLSQ----ESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLA 115
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
L+ MY G ++ VF++ K+ + WN++ + G GE L + +M G +
Sbjct: 116 TKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVE 175
Query: 511 PDGVAFVAVLSAC----SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
D + VL AC A + +G+ I + R + +VD+ R G +
Sbjct: 176 SDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRR-GYNSHVYIMTTLVDMYARFGCVD 234
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
AS + MP+ N W ++ +C KN EA+ + ++TET S
Sbjct: 235 YASYVFNGMPVR-NVVSWSAMI-AC-YAKNGKAFEALRT-FREMMTETKDS 281
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 351 bits (901), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 213/658 (32%), Positives = 348/658 (52%), Gaps = 43/658 (6%)
Query: 59 ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
A F A +++ Y R G L AR +FE P K + WN+++ G +++A K
Sbjct: 106 AERDNFSWALMITCYTRKGMLEKARELFELVPD--KLDTACWNAMIAGYAKKGRFDDAEK 163
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF--RFSFGQIVHNHVLQMGFQGN------ 170
++ KM ++ + K + +F R + +V +++ GF N
Sbjct: 164 VFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSA 223
Query: 171 ------------VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
V V L G +A+ G++ ++ KLFD++ KN +SWN M + + +
Sbjct: 224 WELFEKIPDPNAVSWVTMLCG-FARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQI 282
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
D A++LFK E + V+WT++++ + R G+L+E ++++ M + + A A++
Sbjct: 283 DEAVKLFK----ETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDV---AAKTALM 335
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
+ + D +V + N++I Y + G + A NLF ++ KN
Sbjct: 336 SGLIQNGRIDEASQVFSQLNKRDAI-----CWNSMIAGYCQSGRMSEALNLFRQMPVKNA 390
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
VSWN +I+ YA+AG D A E+F +M NVISW+++I F NG +AL
Sbjct: 391 VSWNTMISGYAQAGEMDRATEIFE--------AMGVRNVISWNSLITGFLQNGLYLDALK 442
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
M + T + LS CA AAL +G+++H +++ ++ V N L+ MY
Sbjct: 443 SLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYA 502
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
KCG ++ VF+ IE DLI+WNS+ISGY +NG A FE+M G PD V F+
Sbjct: 503 KCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIG 562
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
+LSACSHAGL N+G +F M+ F IEP EHY+C+VDLLGR G L+EA +IV+ M ++
Sbjct: 563 MLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVK 622
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
NA +WG+LL +CR+HKN ++ + A ++ L +Y+ LSN++A +GRWED ++R
Sbjct: 623 ANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVERLR 682
Query: 639 ISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
+ + + K+ G SWIEV+ +I F S + + +++ +L L+ M +K + D
Sbjct: 683 VLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGKLRTESIKIILNTLSAHMRDKCNISD 740
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 193/399 (48%), Gaps = 68/399 (17%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N ++ ++AK G++SD+ +LFDK+ +N +SWN M +G+ N + A +LF M E
Sbjct: 52 NSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMA----E 107
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
+ +W +++ + R G LE+ +LF+++ + + + C + +I
Sbjct: 108 RDNFSWALMITCYTRKGMLEKARELFELVPDK-----------LDTACWN-------AMI 149
Query: 295 HGFVIKGGFED--YVFVK---------NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
G+ KG F+D VF K N+++ Y ++G + +A F + E+N+VSWN
Sbjct: 150 AGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNL 209
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGS-----------------------MERPNVISW 380
++ + A E+F ++ + S M NV+SW
Sbjct: 210 MVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSW 269
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+A+I A+ + + +EA+ LF++ V+ + I+G + V L+ RE++ +
Sbjct: 270 NAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRV----GKLDEAREVYNQMPY 325
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
K++ + L++ ++ G ++E VF Q+ K+D I WNSMI+GY +G AL
Sbjct: 326 ----KDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNL 381
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
F +M + V++ ++S + AG ++ IF+ M
Sbjct: 382 FRQMP----VKNAVSWNTMISGYAQAGEMDRATEIFEAM 416
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 139/323 (43%), Gaps = 68/323 (21%)
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
VF +N I GK G + A+ +FS + KN ++N+++T +A+ G +A ++F +
Sbjct: 17 VFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDK--- 73
Query: 367 LDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
M + N++SW+ +I + N EEA LF M ++ + + +++
Sbjct: 74 -----MSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLM----AERDNFSWALMITCYTRKG 124
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
L RE+ V + N ++ Y K G ++ VFE++ KDL+++NSM++
Sbjct: 125 MLEKARELFE---LVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLA 181
Query: 487 GYGMNGLGENALATFEEMIE----------AGF-----------------KPDGVAFVAV 519
GY NG A+ FE M E AGF P+ V++V +
Sbjct: 182 GYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTM 241
Query: 520 LSACSHAGLVNEGRRIFDMM------------------------VREFRIEPQME--HYA 553
L + G + E R++FD M V+ F+ P + +
Sbjct: 242 LCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWT 301
Query: 554 CMVDLLGRAGLLQEASDIVKNMP 576
M++ R G L EA ++ MP
Sbjct: 302 TMINGYVRVGKLDEAREVYNQMP 324
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 163/376 (43%), Gaps = 92/376 (24%)
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG- 369
N+++ V+ K+G V A+ LF ++ ++N+VSWN +I Y + +EA ++F + + D
Sbjct: 52 NSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNF 111
Query: 370 ------------GSMERP-----------NVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
G +E+ + W+A+I +A GR ++A +F KM +
Sbjct: 112 SWALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVK 171
Query: 407 -------------------------------KVVANSVTISGLLSVCAESAALNIGREI- 434
VV+ ++ ++G ++ C +A + +I
Sbjct: 172 DLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIP 231
Query: 435 ----------------HGHVVRVSM------NKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
HG +V KN++ N ++ Y++ ++E +F++
Sbjct: 232 DPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKE 291
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
KD ++W +MI+GY G + A + +M +K D A A++S G ++E
Sbjct: 292 TPYKDCVSWTTMINGYVRVGKLDEAREVYNQM---PYK-DVAAKTALMSGLIQNGRIDEA 347
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN--- 589
++F + + I + M+ ++G + EA ++ + MP++ NA W T+++
Sbjct: 348 SQVFSQLNKRDAI-----CWNSMIAGYCQSGRMSEALNLFRQMPVK-NAVSWNTMISGYA 401
Query: 590 -SCRMHKNTDVAEAMA 604
+ M + T++ EAM
Sbjct: 402 QAGEMDRATEIFEAMG 417
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 72/139 (51%), Gaps = 14/139 (10%)
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFE 502
++KN N ++ ++ K G + + +F+++ +++L++WN+MI+GY N + E A F+
Sbjct: 44 IHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFD 103
Query: 503 EMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC---MVDLL 559
M E D ++ +++ + G++ + R +F+++ P AC M+
Sbjct: 104 LMAER----DNFSWALMITCYTRKGMLEKARELFELV-------PDKLDTACWNAMIAGY 152
Query: 560 GRAGLLQEASDIVKNMPME 578
+ G +A + + MP++
Sbjct: 153 AKKGRFDDAEKVFEKMPVK 171
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
LNIG + +KN+ QN + K G ++E VF + K+ T+NSM++
Sbjct: 3 LNIGTR-----STLEQSKNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTV 57
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
+ NG +A F++M + V++ +++ H +V E ++FD+M E
Sbjct: 58 FAKNGRVSDARQLFDKMSQRNL----VSWNTMIAGYLHNNMVEEAHKLFDLMA-----ER 108
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+A M+ R G+L++A ++ + +P + + W ++
Sbjct: 109 DNFSWALMITCYTRKGMLEKARELFELVPDKLDTACWNAMI 149
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 15/235 (6%)
Query: 38 LQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCK 94
L C + L KQ+H ++ +G F++ ++++YA+ G + A VF+ D +
Sbjct: 463 LSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFK----DIE 518
Query: 95 SSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
L+ WNS++ NG A + +M G + D TF ++ AC G
Sbjct: 519 GVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVD 578
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGF 212
+ + + + + L+ + +MG++ ++F + ++VK N W + +
Sbjct: 579 LFKCM---IEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAAC 635
Query: 213 ALNFDCD-GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
++ + + G + + +ELE N + +L + HA GR E+ L +MR+R
Sbjct: 636 RVHKNMELGKIAALRLLELE--PHNASNYITLSNMHAEAGRWEDVERLRVLMRER 688
>gi|357119036|ref|XP_003561252.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71490-like [Brachypodium distachyon]
Length = 692
Score = 351 bits (901), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 203/606 (33%), Positives = 313/606 (51%), Gaps = 43/606 (7%)
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
+ L +N ++ + +G +AL Y +M + VL D FT+P V+RAC G +
Sbjct: 125 TCPLPYNILISSCLRHGFPRHALAAYQQMARSAVLPDAFTYPSVLRACAEAGDL----AL 180
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ VH H L G G++ N L+ MYAK G + + K+F+ + K+ +SWN M S +
Sbjct: 181 GRAVHLHGLATGVGGHLFFQNALVSMYAKSGDLVAARKVFEGMAQKDVVSWNSMISAYVA 240
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
A+ELF+RM E E N VTW ++ + + L M G V
Sbjct: 241 VGQWVQAVELFERMRAEEAEVNSVTWNTIAGVYINTRDHRAAVGLIREMVSDGAAVDFVT 300
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ + + C+ + +GK IHG ++ + V NALI +Y + + A LF +
Sbjct: 301 LVIGSNACSRVGWLRLGKEIHGLAVRMNCDGVESVANALITMYARCKHMDSACLLFKMLA 360
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
+V+WN +I S+A L DEA E
Sbjct: 361 CPGVVTWNTMIASFA---LSDEA------------------------------------E 381
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
EA L +M A V N VT+ LL++CA A L G+E+H H+V+ L+ N L+
Sbjct: 382 EASRLVHEMVGAGVQPNYVTVVTLLALCARVANLQHGQELHSHIVKNGFKGYRLLWNSLI 441
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY K G L VF+ ++ +D+I++ MI+GYGM G G AL F++MI++G KPD +
Sbjct: 442 DMYSKSGXLSVAQNVFDTMDDRDMISYTXMIAGYGMQGKGTIALRLFDQMIDSGIKPDHI 501
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
+ V VLSACSH+GLV EG ++FD M + I+PQMEHY+CMVDL R+GLL++A ++
Sbjct: 502 SMVTVLSACSHSGLVTEGEKLFDKMTSSYGIKPQMEHYSCMVDLYARSGLLEKAEGMLNE 561
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
P + +W L+ +C N + E A ++ + TE G Y+L++N+YAA+G W++
Sbjct: 562 SSSPPTSMMWAALVGACHDRGNIIIGERAARRLLEMKTENAGHYVLIANMYAAAGCWDEL 621
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
A VR + G+ K G +W++++ F G+ + EVL+EL+ QM N G
Sbjct: 622 ATVRKLMRDLGVTKAPGLAWVDLRNGFAPFLVGDRSNPLAPEIYEVLDELSEQMRNIGNC 681
Query: 695 PDNDII 700
D DI+
Sbjct: 682 SDLDIV 687
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 185/434 (42%), Gaps = 87/434 (20%)
Query: 10 HQFSPSNPSRPFSIITYNNSLLDCFDH--LLQQCKTIHQL---KQVHNQLIVTGANASAF 64
H F P + + + + L D F + +L+ C L + VH + TG F
Sbjct: 140 HGF-PRHALAAYQQMARSAVLPDAFTYPSVLRACAEAGDLALGRAVHLHGLATGVGGHLF 198
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
++S+YA+ G L AR VFE + + WNS++ V+ G + A++L+ +MR
Sbjct: 199 FQNALVSMYAKSGDLVAARKVFEGM---AQKDVVSWNSMISAYVAVGQWVQAVELFERMR 255
Query: 125 K-------------LGV-----------------LGDGFTFPLVI-----RACKFMGSFR 149
GV + DG V AC +G R
Sbjct: 256 AEEAEVNSVTWNTIAGVYINTRDHRAAVGLIREMVSDGAAVDFVTLVIGSNACSRVGWLR 315
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+ +H ++M G + N LI MYA+ M + LF + ++WN M
Sbjct: 316 ----LGKEIHGLAVRMNCDGVESVANALITMYARCKHMDSACLLFKMLACPGVVTWNTMI 371
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+ FAL+ + + A L M G++PN+VT +LL
Sbjct: 372 ASFALSDEAEEASRLVHEMVGAGVQPNYVTVVTLL------------------------- 406
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
++CA +A G+ +H ++K GF+ Y + N+LI +Y K G + VAQN+
Sbjct: 407 ----------ALCARVANLQHGQELHSHIVKNGFKGYRLLWNSLIDMYSKSGXLSVAQNV 456
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
F +++++++S+ +I Y G A+ +F Q+ +D G +P+ IS V+ A +
Sbjct: 457 FDTMDDRDMISYTXMIAGYGMQGKGTIALRLFDQM--IDSGI--KPDHISMVTVLSACSH 512
Query: 390 NGRGEEALDLFRKM 403
+G E LF KM
Sbjct: 513 SGLVTEGEKLFDKM 526
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 351 bits (901), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 211/674 (31%), Positives = 361/674 (53%), Gaps = 63/674 (9%)
Query: 31 LDC--FDHLLQQCKTIH---QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNV 85
LDC + HLL + Q KQ+H +LI+ +LA++++++Y++ L AR V
Sbjct: 22 LDCGIYGHLLHHLTELRLPLQAKQLHARLILFSVTPENYLASKLVALYSKTNHLAFARYV 81
Query: 86 FETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
F+ P ++ +N++L + + +AL L+ + ++ + L+ K +
Sbjct: 82 FDQIP---HKNTFSYNAMLISYSLHNRHGDALDLFSSLASSNLVNNISITCLL----KSL 134
Query: 146 GSFRFR-FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
SF G+ VH VL+ GF +V + N LI Y+K + S K+FD++ ++ +S
Sbjct: 135 SSFTLSDVKLGKEVHGFVLRTGFDADVFVENALITYYSKCYDLDLSRKVFDRMTKRDVVS 194
Query: 205 WNMMFSGFA---LNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
WN M SG++ L DC L++ M + G PN VT S+L + CG+ +
Sbjct: 195 WNSMISGYSQGGLYEDCK---TLYREMVDFSGFRPNGVTVVSVLQA---CGQTQ------ 242
Query: 261 DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
DLA G +H F++ E + V NALI +Y K
Sbjct: 243 -----------------------DLA---FGMEVHKFIVDNQVEIDISVCNALIGLYAKC 276
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
G + A+ LF E+ EK+ V++ A+I+ G D+++E+F M+ + +W
Sbjct: 277 GSLDYARELFDEMSEKDEVTYGAIISGLMLHGYVDQSLELFR--------GMKTQILSTW 328
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+AVI N R E LDL R+MQ N+VT+S +LS A ++L G+EIH + ++
Sbjct: 329 NAVITGLVQNNRHEGVLDLVREMQALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIK 388
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
+ ++NI V +++MY K G L VF+Q + + L+ W ++IS Y ++G AL
Sbjct: 389 IGYHRNIYVATAIIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIISAYAVHGDANLALGL 448
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F EM++ G +PD V F AVL+AC+H G+V++ IF+ M +++ I+P +EHYAC+V LG
Sbjct: 449 FHEMLKQGIQPDPVTFTAVLAACAHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALG 508
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML 620
+A L EA + V MP+EP+A VWG LL+ + + ++ +++ +F + E TG+Y++
Sbjct: 509 KARRLSEAKEFVSKMPIEPSAKVWGALLHGASISSDVELGKSVCDYLFEIEPENTGNYVI 568
Query: 621 LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEV 680
++N+Y+ +GRW++A +VR GL+K+ G SWIE + F + ++ +++ + +
Sbjct: 569 MANLYSQAGRWKEADEVRERMNKVGLQKIPGSSWIETSEGLRSFIATDTCTENVEEIHVI 628
Query: 681 LEELALQMENKGCV 694
L+ L M ++G V
Sbjct: 629 LKGLLGLMRDEGKV 642
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 351 bits (901), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 206/668 (30%), Positives = 353/668 (52%), Gaps = 84/668 (12%)
Query: 37 LLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L++C K + KQVH+ +I + +A + +L +Y GRL +AR VF+
Sbjct: 34 VLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDAL---V 90
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K S WN+++ V + E+A++L+ +M GV + T+ ++++AC + + +
Sbjct: 91 KKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALK---- 146
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
+G+ VH + G + +V + L+ MY K G ++++ ++FD + + ISW +M +A
Sbjct: 147 WGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYA 206
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ + A L +ME EG +PN +T+ S+L++
Sbjct: 207 QSGNGKEAYRLMLQMEQEGFKPNAITYVSILNA--------------------------- 239
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
CA A K +H + G E V V AL+ +Y K G + A+ +F +
Sbjct: 240 --------CASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRM 291
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
+ +++VSWN +I ++AE G EA ++F Q++ +G +P+ I + +++ A AS G
Sbjct: 292 KVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQT-EGC---KPDAIMFLSILNACASAG-- 345
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
AL ++IH H + + ++ V L
Sbjct: 346 ---------------------------------ALEWVKKIHRHALDSGLEVDVRVGTAL 372
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY K G +++ +VF++++ +++++WN+MISG +GLG++AL F M G KPD
Sbjct: 373 VHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDR 432
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
V FVAVLSACSHAGLV+EGR + M + + IEP + H CMVDLLGRAG L EA +
Sbjct: 433 VTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFID 492
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
NM ++P+ WG LL SCR + N ++ E +A + L + +Y+LLSNIYA +G+W+
Sbjct: 493 NMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDM 552
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
+ VR + +G++K G+SWIEV KIH F +S + K + E +++ +++ +G
Sbjct: 553 VSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVIEKIKAEGY 612
Query: 694 VPDNDIIL 701
+PD ++L
Sbjct: 613 IPDTRLVL 620
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 151/356 (42%), Gaps = 79/356 (22%)
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
+N E + L ++Q ++ +S +L C + L +++H +++ M +N
Sbjct: 6 ANTLSEAIVVLMNRLQRG-LITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAH 64
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
V N LL++Y++CG L+E VF+ + KK +WN+MI+GY + E+A+ F EM G
Sbjct: 65 VMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEG 124
Query: 509 FKPDGVAFVAVLSACS----------------HAGL-------------------VNEGR 533
+P+ ++ +L AC+ H GL +NE R
Sbjct: 125 VQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEAR 184
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTLLNS 590
RIFD ++ I + M+ ++G +EA ++ M E PNA + ++LN+
Sbjct: 185 RIFDNLMNHDIIS-----WTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNA 239
Query: 591 C----------RMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRIS 640
C R+H++ A GL + L+ +YA SG +DA V
Sbjct: 240 CASEGALKWVKRVHRHALDA--------GLELDVRVGTALV-QMYAKSGSIDDARVVFDR 290
Query: 641 AKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
K + + SW + G+ +L LQM+ +GC PD
Sbjct: 291 MKVRDV-----VSWNVMIGAFAEHGRGHEAY-----------DLFLQMQTEGCKPD 330
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 202/649 (31%), Positives = 347/649 (53%), Gaps = 60/649 (9%)
Query: 26 YNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNV 85
Y + C DHL + KQ+H +L+++ FL ++++S Y++ G + DA NV
Sbjct: 6 YGRLIQHCTDHLFFRVG-----KQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNV 60
Query: 86 FETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY---VKMRKLGVLGDGFTFPLVIRAC 142
F P + + WN++ + ++ + LKL+ V V D FT ++A
Sbjct: 61 FGKIP---RKNIFSWNALFISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKA- 116
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ S + VH+ +L+ G + ++ +VN LI Y++ ++ + +FD++
Sbjct: 117 --LASLFSNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMP---- 170
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
E + V+W ++L+ +++ G EE +LF +
Sbjct: 171 -------------------------------ERDTVSWNAMLAGYSQGGSYEECKELFRV 199
Query: 263 MRKRGIEVGAEAIAVV--LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
M +EV A+ V L CA G +H FV + + V + NA+I +Y K
Sbjct: 200 MLS-SVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDVSLWNAVIGLYAKC 258
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
G + A+ LF E+ EK+ +++ ++I+ Y G ++A+++F + ERP + +W
Sbjct: 259 GILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFRE--------QERPRLPTW 310
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+AVI N R E A+D+FR MQ N+VT++ +L V + + L G+EIHG+ +R
Sbjct: 311 NAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIR 370
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
+ ++NI V +++ Y KCG L LVF+QI+ + LI W S+IS Y ++G AL+
Sbjct: 371 NTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSL 430
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F EM+ G +PD V F +VL+AC+H+G ++E +IF++++ E+ I+P +EHYACMV +L
Sbjct: 431 FYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLS 490
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML 620
RAG L +A + + MP+EP A VWG LLN + + ++ + + ++F + E TG+Y++
Sbjct: 491 RAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVI 550
Query: 621 LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
++N+Y+ SGRW+DA +R K LKK+ G SWIE + F +S
Sbjct: 551 MANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIETSGGMQRFCXRHS 599
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 213/669 (31%), Positives = 346/669 (51%), Gaps = 64/669 (9%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L +LS++ RFG L DA VF + WN ++ G ++ AL LY +M
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMS---ERDVFSWNVLVGGYAKAGCFDEALNLYHRML 190
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
+ + +TFP V++ C + + G+ +H HV++ GF+ +V + N LI MY K
Sbjct: 191 WAEIRPNVYTFPSVLKTCAGVSDI----ARGKEIHAHVIRFGFESDVDVGNALITMYVKC 246
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT--- 241
G +S++ LFDK+ ++ ISWN M SG+ N LELF M ++P+ +T T
Sbjct: 247 GDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVA 306
Query: 242 --------------------------------SLLSSHARCGRLEETMDLFDMMRKRGIE 269
SL+ ++ GRLEE +F M + +
Sbjct: 307 SACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVV 366
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL-ICVYGKHGDVKVAQN 328
IA ++S A K++ ++G D + + + L C H D+ +
Sbjct: 367 SWTAMIASLVSHKLPFKAVETYKMME---LEGILPDEITLVSVLSACACIGHLDLGIR-- 421
Query: 329 LFSEIEEK-----NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
EI K +++ N+LI Y++ D A+EVF + NV+SW+++
Sbjct: 422 -LHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISG--------KNVVSWTSL 472
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
I N R EAL FR+M+ + NSVT+ +LS CA AL G+EIH H +R +
Sbjct: 473 ILGLRINNRSFEALLFFRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGV 531
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
+ + N +L+MY++CG F +KKD+ WN +++GY G + A+ F++
Sbjct: 532 GFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDK 590
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M+E PD + F+++L ACS +G+V EG F++M ++ + P ++HYAC+VD+LGRAG
Sbjct: 591 MLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAG 650
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
L +A D +++MP+ P+A +WG LLN+CR+H+N ++ E A ++F ++ G Y+LL N
Sbjct: 651 QLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCN 710
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
+YA G W+ +KVR + +GL G SW+E+K K+H F SG++ S K + VL+
Sbjct: 711 LYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDG 770
Query: 684 LALQMENKG 692
+M+ G
Sbjct: 771 FCSKMKENG 779
Score = 162 bits (410), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 140/568 (24%), Positives = 240/568 (42%), Gaps = 148/568 (26%)
Query: 171 VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
V + N L+ M+ + G + D++ +F K+ ++ SWN++ G+A D AL L+ RM
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
+ PN T+ S VL CA ++
Sbjct: 192 AEIRPNVYTFPS-----------------------------------VLKTCAGVSDIAR 216
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
GK IH VI+ GFE V V NALI +Y K GD+ A+ LF ++ +++ +SWNA+I+ Y E
Sbjct: 217 GKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFE 276
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA------------------------ 386
G E +E+FS + +L P++I+ + V A
Sbjct: 277 NGGGLEGLELFSMMRELS----VDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGG 332
Query: 387 -----------FASNGRGEEA-------------------------------LDLFRKMQ 404
++S GR EEA ++ ++ M+
Sbjct: 333 DISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMME 392
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
L ++ + +T+ +LS CA L++G +H ++ + +++V N L++MY KC C++
Sbjct: 393 LEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVD 452
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
VF I K++++W S+I G +N AL F +M E+ KP+ V ++VLSAC+
Sbjct: 453 NALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACA 511
Query: 525 HAGLVNEGRR-------------------IFDMMVREFRIEPQMEHYACMVDLL------ 559
G + G+ I DM VR R P + + +
Sbjct: 512 RIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKKDVTAWNIL 571
Query: 560 -------GRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL-- 610
G+A L E D + + + P+ + +LL +C K+ V E + + F +
Sbjct: 572 LTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACS--KSGMVTEGL--EYFNIMK 627
Query: 611 ----ITETTGSYMLLSNIYAASGRWEDA 634
+T Y + +I +G+ +DA
Sbjct: 628 NKYNLTPNLKHYACVVDILGRAGQLDDA 655
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 156/346 (45%), Gaps = 43/346 (12%)
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
G LE+ M + M + IEV +A +L +C A G + Y V
Sbjct: 76 GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRV-----------YELVS 124
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
++ C+ + G NAL++ + G +A VF G
Sbjct: 125 SSKSCLCVRLG--------------------NALLSMFVRFGNLLDAWYVF--------G 156
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
M +V SW+ ++G +A G +EAL+L+ +M A++ N T +L CA + +
Sbjct: 157 KMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIAR 216
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
G+EIH HV+R ++ V N L+ MY+KCG + ++F+++ K+D I+WN+MISGY
Sbjct: 217 GKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFE 276
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR-EFRIEPQM 549
NG G L F M E PD + V SAC GR + +V+ EF + M
Sbjct: 277 NGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISM 336
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
+ ++ + G L+EA + M + + W ++ S HK
Sbjct: 337 NN--SLIQMYSSLGRLEEAETVFSRMESK-DVVSWTAMIASLVSHK 379
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 120/235 (51%), Gaps = 16/235 (6%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C I L ++H I TG + ++ ++ +Y++ + +A VF
Sbjct: 406 VLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNIS--- 462
Query: 94 KSSSLLWNS-ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ + W S IL + ++N +E AL + +M++ + + T V+ AC +G+
Sbjct: 463 GKNVVSWTSLILGLRINNRSFE-ALLFFRQMKE-SMKPNSVTLISVLSACARIGALMR-- 518
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H H L+ G + + N ++ MY + G+ + F+ + K+ +WN++ +G+
Sbjct: 519 --GKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGY 575
Query: 213 ALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
A A+ELF +M ELE + P+ +T+ SLL + ++ G + E ++ F++M+ +
Sbjct: 576 AQQGQAKLAVELFDKMLELE-IHPDEITFISLLCACSKSGMVTEGLEYFNIMKNK 629
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/619 (32%), Positives = 335/619 (54%), Gaps = 51/619 (8%)
Query: 21 FSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA-RFGRL 79
FS LLD + Q + +K++H L+V+G + + ++V+ +YA L
Sbjct: 831 FSDAEQARKLLDQRKIVKLQEAVMEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDL 890
Query: 80 FDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVI 139
A VF+ ++ LWN++LR + ++A+ Y K ++ G+ D TFP V+
Sbjct: 891 VSAHKVFKQIE---SPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVL 947
Query: 140 RACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV 199
+AC + + G+ +HNHV+++GF ++ + N LI +YA G ++ + +F+++ V
Sbjct: 948 KACAKTCAPKE----GEQMHNHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFNEMLV 1003
Query: 200 KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDL 259
K+ +S W SL+ +++ RL+E + L
Sbjct: 1004 KDVVS-----------------------------------WNSLIGGYSQHNRLKEVLTL 1028
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
F +M+ ++ + V+S C L M + ++ E V++ N LI Y +
Sbjct: 1029 FKLMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCR 1088
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
G ++ A+ +FS++++KN V+ NA+IT+YA+ G A ++F Q+ D +IS
Sbjct: 1089 IGQLQSAEKVFSQMKDKNTVTLNAMITAYAKGGNLVSAKKIFDQIPNKD--------LIS 1140
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVV 439
WS++I A++ ++L+LFR+MQ AKV ++V I+ +LS CA AL++G+ IH +V
Sbjct: 1141 WSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVR 1200
Query: 440 RVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
R ++ + +++N L++M+ KCGC++E VF +E+KD ++WNS+I G NG + AL
Sbjct: 1201 RNNIKADTIMENSLIDMFAKCGCVQEALQVFTDMEEKDTLSWNSIILGLANNGFEDEALD 1260
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
F M+ G +P+ V F+ VL AC++ LV EG F+ M +EPQM+HY C+VD+L
Sbjct: 1261 IFHSMLTEGPRPNEVTFLGVLIACANRQLVEEGLDHFERMKSVHNLEPQMKHYGCVVDIL 1320
Query: 560 GRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYM 619
RAG L++A + MP+ P+ VW LL +CR H N VAE ++ L + M
Sbjct: 1321 SRAGQLEKAVSFISEMPLAPDPVVWRILLGACRTHGNVAVAEMATKKLSELDPGNSADSM 1380
Query: 620 LLSNIYAASGRWEDAAKVR 638
LLSNIYA++ RW DA VR
Sbjct: 1381 LLSNIYASADRWSDAMNVR 1399
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 230/437 (52%), Gaps = 11/437 (2%)
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
R L+ + + W + L +++ E + LF R+ + VL CA L
Sbjct: 435 RTALKVFDQSPAPWRAFLKAYSHGPFPLEALHLFKHARQH-LADDTFVFTFVLKACAGLG 493
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
G +H V++ GFE + +V ALI VY + A+ +F E+ KN+VSWN +IT
Sbjct: 494 WHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNVMIT 553
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
+A G + A +F Q M NV+SW+ +I + EAL L R M
Sbjct: 554 GFAGWGEVEYARLLFDQ--------MPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAG 605
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
+ + +T+ ++ + + +G ++G+ + + + V N L+++Y K G ++
Sbjct: 606 GISPSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNS 665
Query: 467 HLVF-EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
VF E +++++L++W S+ISG+ M+GL AL F EM AG KP+ + F++V++ACSH
Sbjct: 666 LKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSH 725
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
GLV +G F MV E+ I+P+++H+ C++D+LGRAG L EA I++ +PME N VW
Sbjct: 726 GGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWR 785
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
LL C + + E I L E+ G + +LSN+ GR+ DA + R +
Sbjct: 786 ILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQRK 845
Query: 646 LKKVAGQSWIEVKRKIH 662
+ K+ ++ +E +K+H
Sbjct: 846 IVKLQ-EAVMEAVKKLH 861
Score = 159 bits (402), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 140/561 (24%), Positives = 248/561 (44%), Gaps = 71/561 (12%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
+A +G + AR +F+ P C++ + W ++ LY AL L M G+
Sbjct: 555 FAGWGEVEYARLLFDQMP--CRNV-VSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSE 611
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
T VI A +G G++++ + + G + + N LI +YAK+G + +S K
Sbjct: 612 ITVLAVIPAISNLGGILM----GEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLK 667
Query: 193 LFDK-VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
+FD+ + +N +SW + SGFA++ ALELF M G++PN +T+ S++++ + G
Sbjct: 668 VFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGG 727
Query: 252 RLEETMDLF--------------------DMMRKRG-------------IEVGAEAIAVV 278
+E+ + F DM+ + G +EV ++
Sbjct: 728 LVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRIL 787
Query: 279 LSVCADLAADHMG----KVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE-- 332
L C+ MG K+I + G D+ + N L + G+ D + A+ L +
Sbjct: 788 LGCCSKYGEVAMGERAIKMISDLERESG-GDFAVLSNVLTEL-GRFSDAEQARKLLDQRK 845
Query: 333 ---IEEKNIVSWNALITSYAEAGL--CDEAVEVFSQLEKLDGGSM----------ERPNV 377
++E + + L +GL C A+ +L L + E P
Sbjct: 846 IVKLQEAVMEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTT 905
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
W+ ++ A + ++A+ ++K Q + +++T +L CA++ A G ++H H
Sbjct: 906 FLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNH 965
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
V+++ +I V N L+ +Y CG L VF ++ KD+++WNS+I GY + +
Sbjct: 966 VIKLGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGYSQHNRLKEV 1025
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR---IEPQMEHYAC 554
L F+ M + D V V V+SAC+H G + D MVR IE +
Sbjct: 1026 LTLFKLMQAEEVQADKVTMVKVISACTHLG----DWSMADCMVRYIEHNHIEVDVYLGNT 1081
Query: 555 MVDLLGRAGLLQEASDIVKNM 575
++D R G LQ A + M
Sbjct: 1082 LIDYYCRIGQLQSAEKVFSQM 1102
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 164/323 (50%), Gaps = 21/323 (6%)
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
A VF+ +P W + L+ AL L+ R+ + D F F V++A
Sbjct: 437 ALKVFDQSPAP-------WRAFLKAYSHGPFPLEALHLFKHARQ-HLADDTFVFTFVLKA 488
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C +G R G +H V+Q GF+ + ++ LI +Y + ++ K+FD++ VKN
Sbjct: 489 CAGLGWHRA----GAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKN 544
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
+SWN+M +GFA + + A LF +M N V+WT L+ + R E + L
Sbjct: 545 VVSWNVMITGFAGWGEVEYARLLFDQMPCR----NVVSWTGLIDGYTRACLYAEALTLLR 600
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
M GI + V+ ++L MG++++G+ K G V N+LI +Y K G
Sbjct: 601 HMMAGGISPSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIG 660
Query: 322 DVKVAQNLFSE-IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
V+ + +F E ++ +N+VSW ++I+ +A GL EA+E+F+++ + + +PN I++
Sbjct: 661 SVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRR----AGIKPNRITF 716
Query: 381 SAVIGAFASNGRGEEALDLFRKM 403
+VI A + G E+ L F+ M
Sbjct: 717 LSVINACSHGGLVEQGLAFFKSM 739
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 211/655 (32%), Positives = 323/655 (49%), Gaps = 82/655 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL-WNSILRV 106
K++H + ++ +A ++ +YA+ G A+ +F + + L+ W++I+
Sbjct: 349 KEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLF----WGLQGRDLVAWSAIIAA 404
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
V G E AL L+ +M+ + + T ++ AC + + G+ +H ++
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL----GKSIHCFTVKAD 460
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
++ L+ MYAK G + AL F
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFT-------------------------------AALTTFN 489
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
RM + VTW SL++ +A+ G +D+F +R I A + V+ CA L
Sbjct: 490 RMS----SRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLN 545
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
G IHG ++K GFE VKNALI +Y K G + A+ LF++ +
Sbjct: 546 DLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTD------------ 593
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
F++ E ++W+ +I A+ NG +EA+ F +M+L
Sbjct: 594 --------------FTKDE------------VTWNVIIAAYMQNGHAKEAISSFHQMRLE 627
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
NSVT +L A AA G H ++++ N LV N L++MY KCG L+
Sbjct: 628 NFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYS 687
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
+F +++ KD ++WN+M+SGY ++G G+ A+A F M E+ + D V+FV+VLSAC HA
Sbjct: 688 EKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHA 747
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GLV EGR+IF M ++ I+P +EHYACMVDLLGRAGL E +K MP+EP+A VWG
Sbjct: 748 GLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGA 807
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL SCRMH N + E + L +++LS+IYA SGRW DA K R GL
Sbjct: 808 LLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGL 867
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
KK G SW+E+K K+H F G+ L+++ + L +ME G VPD +L
Sbjct: 868 KKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVL 922
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 151/565 (26%), Positives = 254/565 (44%), Gaps = 88/565 (15%)
Query: 25 TYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
TY N L + LL CK ++ L Q+H Q+IV+G + ++++Y+ F + AR+
Sbjct: 28 TYTNYLH--YPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSIT-HLINLYSLFHKCDLARS 84
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
VF++ P S +LWNS++R + Y AL++Y M + G+ D +TF V++AC
Sbjct: 85 VFDSTP---NPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACT- 140
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
G+ + G H + + G + +V I L+ MY+KMG + + ++FDK+ ++ ++
Sbjct: 141 -GALNLQE--GVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVA 197
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
WN M +G L S C E +D F M+
Sbjct: 198 WNAMIAG-------------------------------LSQSEDPC----EAVDFFRSMQ 222
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
G+E + ++ + L+ + + IHG+V + F V N LI +Y K GDV
Sbjct: 223 LVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV--SNGLIDLYSKCGDV- 279
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
D A VF Q+ D +SW ++
Sbjct: 280 ------------------------------DVARRVFDQMVDQDD--------VSWGTMM 301
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
+A NG E L+LF KM+L V N V+ AE+ L G+EIHG ++ ++
Sbjct: 302 AGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRID 361
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
+ILV L+ MY KCG E+ +F ++ +DL+ W+++I+ G E AL+ F+EM
Sbjct: 362 SDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEM 421
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
KP+ V +++L AC+ L+ G+ I V+ ++ + +V + + G
Sbjct: 422 QNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKA-DMDSDLSTGTALVSMYAKCGF 480
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLN 589
A M + W +L+N
Sbjct: 481 FTAALTTFNRMSSR-DIVTWNSLIN 504
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 198/656 (30%), Positives = 334/656 (50%), Gaps = 85/656 (12%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H Q IV G ++ L + ++ +Y +F R+ DAR VF+ P + ++LWN+++
Sbjct: 141 IHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMP---EKDTILWNTMISGYRK 197
Query: 110 NGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
N +Y +++++ + + D T ++ A + R G +H+ + G
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL----GMQIHSLATKTGCY 253
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+ +++ I +Y+K G++ + LF + R + +++N M G+ N
Sbjct: 254 SHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSN------------- 300
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
G E ++ LF + G ++ + + ++ V L
Sbjct: 301 ----------------------GETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLM-- 336
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+ IHG+ +K F + V AL VY K +++ A+ LF E EK++ S
Sbjct: 337 -LIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPS-------- 387
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
W+A+I + NG E+A+ LFR+MQ ++
Sbjct: 388 -------------------------------WNAMISGYTQNGLTEDAISLFREMQNSEF 416
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
N VTI+ +LS CA+ AL++G+ +H V +I V L+ MY KCG + E
Sbjct: 417 SPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARR 476
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
+F+ + KK+ +TWN+MISGYG++G G+ AL F EM+ +G P V F+ VL ACSHAGL
Sbjct: 477 LFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGL 536
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
V EG IF+ M+ + EP ++HYAC+VD+LGRAG LQ A ++ MP++P VW TLL
Sbjct: 537 VKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLL 596
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
+CR+HK+T++A ++ ++F L + G ++LLSNI++A + AA VR +AK + L K
Sbjct: 597 GACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAK 656
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G + IE+ H+F+SG+ +K + E LE+L +M G P+ ++ L ++
Sbjct: 657 APGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHDV 712
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/528 (21%), Positives = 220/528 (41%), Gaps = 100/528 (18%)
Query: 144 FMGSFRFRFSFGQIVHNH--VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
F+ F+ S + H ++ GF+ ++ ++ +L + +G + + +F V+ +
Sbjct: 23 FLDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPD 82
Query: 202 YISWNMMFSGFALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
+N++ GF++N +L +F + + L+PN T+
Sbjct: 83 VFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTY-------------------- 122
Query: 261 DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
A +S + D G VIHG I G + + + + ++ +Y K
Sbjct: 123 ---------------AFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKF 167
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL-----EKLDGGSM--- 372
V+ A+ +F + EK+ + WN +I+ Y + + E+++VF L +LD ++
Sbjct: 168 WRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDI 227
Query: 373 --------------------ERPNVISWSAVIGAFAS----NGRGEEALDLFRKMQLAKV 408
+ S V+ F S G+ + A LFR+ + +
Sbjct: 228 LPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDI 287
Query: 409 VANSVTISG----------------------------LLSVCAESAALNIGREIHGHVVR 440
VA + I G L+S+ S L + IHG+ ++
Sbjct: 288 VAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLK 347
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
+ + V L +Y K +E +F++ +K L +WN+MISGY NGL E+A++
Sbjct: 348 SNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISL 407
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F EM + F P+ V +LSAC+ G ++ G+ + D +VR E + ++ +
Sbjct: 408 FREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHD-LVRSTDFESSIYVSTALIGMYA 466
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
+ G + EA + MP + N W T+++ +H + A + S++
Sbjct: 467 KCGSIAEARRLFDFMP-KKNEVTWNTMISGYGLHGHGQEALTIFSEML 513
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 213/669 (31%), Positives = 346/669 (51%), Gaps = 64/669 (9%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L +LS++ RFG L DA VF + WN ++ G ++ AL LY +M
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMS---ERDVFSWNVLVGGYAKAGCFDEALNLYHRML 190
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
+ + +TFP V++ C + + G+ +H HV++ GF+ +V + N LI MY K
Sbjct: 191 WAEIRPNVYTFPSVLKTCAGVSDI----ARGKEIHAHVIRFGFESDVDVGNALITMYVKC 246
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT--- 241
G +S++ LFDK+ ++ ISWN M SG+ N LELF M ++P+ +T T
Sbjct: 247 GDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVA 306
Query: 242 --------------------------------SLLSSHARCGRLEETMDLFDMMRKRGIE 269
SL+ ++ GRLEE +F M + +
Sbjct: 307 SACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVV 366
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL-ICVYGKHGDVKVAQN 328
IA ++S A K++ ++G D + + + L C H D+ +
Sbjct: 367 SWTAMIASLVSHKLPFKAVETYKMME---LEGILPDEITLVSVLSACACIGHLDLGIR-- 421
Query: 329 LFSEIEEK-----NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
EI K +++ N+LI Y++ D A+EVF + NV+SW+++
Sbjct: 422 -LHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISG--------KNVVSWTSL 472
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
I N R EAL FR+M+ + NSVT+ +LS CA AL G+EIH H +R +
Sbjct: 473 ILGLRINNRSFEALLFFRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGV 531
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
+ + N +L+MY++CG F +KKD+ WN +++GY G + A+ F++
Sbjct: 532 GFDGFLPNAILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDK 590
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M+E PD + F+++L ACS +G+V EG F++M ++ + P ++HYAC+VD+LGRAG
Sbjct: 591 MLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAG 650
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
L +A D +++MP+ P+A +WG LLN+CR+H+N ++ E A ++F ++ G Y+LL N
Sbjct: 651 QLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCN 710
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
+YA G W+ +KVR + +GL G SW+E+K K+H F SG++ S K + VL+
Sbjct: 711 LYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDG 770
Query: 684 LALQMENKG 692
+M+ G
Sbjct: 771 FCSKMKENG 779
Score = 162 bits (410), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 140/568 (24%), Positives = 240/568 (42%), Gaps = 148/568 (26%)
Query: 171 VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
V + N L+ M+ + G + D++ +F K+ ++ SWN++ G+A D AL L+ RM
Sbjct: 132 VRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLW 191
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
+ PN T+ S VL CA ++
Sbjct: 192 AEIRPNVYTFPS-----------------------------------VLKTCAGVSDIAR 216
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
GK IH VI+ GFE V V NALI +Y K GD+ A+ LF ++ +++ +SWNA+I+ Y E
Sbjct: 217 GKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFE 276
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA------------------------ 386
G E +E+FS + +L P++I+ + V A
Sbjct: 277 NGGGLEGLELFSMMRELS----VDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGG 332
Query: 387 -----------FASNGRGEEA-------------------------------LDLFRKMQ 404
++S GR EEA ++ ++ M+
Sbjct: 333 DISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMME 392
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
L ++ + +T+ +LS CA L++G +H ++ + +++V N L++MY KC C++
Sbjct: 393 LEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVD 452
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
VF I K++++W S+I G +N AL F +M E+ KP+ V ++VLSAC+
Sbjct: 453 NALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACA 511
Query: 525 HAGLVNEGRR-------------------IFDMMVREFRIEPQMEHYACMVDLL------ 559
G + G+ I DM VR R P + + +
Sbjct: 512 RIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKKDVTAWNIL 571
Query: 560 -------GRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL-- 610
G+A L E D + + + P+ + +LL +C K+ V E + + F +
Sbjct: 572 LTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACS--KSGMVTEGL--EYFNIMK 627
Query: 611 ----ITETTGSYMLLSNIYAASGRWEDA 634
+T Y + +I +G+ +DA
Sbjct: 628 NKYNLTPNLKHYACVVDILGRAGQLDDA 655
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 156/346 (45%), Gaps = 43/346 (12%)
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
G LE+ M + M + IEV +A +L +C A G + Y V
Sbjct: 76 GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRV-----------YELVS 124
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
++ C+ + G NAL++ + G +A VF G
Sbjct: 125 SSKSCLCVRLG--------------------NALLSMFVRFGNLLDAWYVF--------G 156
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
M +V SW+ ++G +A G +EAL+L+ +M A++ N T +L CA + +
Sbjct: 157 KMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIAR 216
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
G+EIH HV+R ++ V N L+ MY+KCG + ++F+++ K+D I+WN+MISGY
Sbjct: 217 GKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFE 276
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR-EFRIEPQM 549
NG G L F M E PD + V SAC GR + +V+ EF + M
Sbjct: 277 NGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISM 336
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
+ ++ + G L+EA + M + + W ++ S HK
Sbjct: 337 NN--SLIQMYSSLGRLEEAETVFSRMESK-DVVSWTAMIASLVSHK 379
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 120/235 (51%), Gaps = 16/235 (6%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C I L ++H I TG + ++ ++ +Y++ + +A VF
Sbjct: 406 VLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNIS--- 462
Query: 94 KSSSLLWNS-ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ + W S IL + ++N +E AL + +M++ + + T V+ AC +G+
Sbjct: 463 GKNVVSWTSLILGLRINNRSFE-ALLFFRQMKE-SMKPNSVTLISVLSACARIGALMR-- 518
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H H L+ G + + N ++ MY + G+ + F+ + K+ +WN++ +G+
Sbjct: 519 --GKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQK-KDVTAWNILLTGY 575
Query: 213 ALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
A A+ELF +M ELE + P+ +T+ SLL + ++ G + E ++ F++M+ +
Sbjct: 576 AQQGQAKLAVELFDKMLELE-IHPDEITFISLLCACSKSGMVTEGLEYFNIMKNK 629
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 201/625 (32%), Positives = 331/625 (52%), Gaps = 87/625 (13%)
Query: 76 FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
F R D +VF WNS++ +G AL + MRKL + +F
Sbjct: 32 FNRYVDKTDVFS------------WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSF 79
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
P I+AC + F G+ H G+Q ++ + + LI MY+ G++ D+ K+FD
Sbjct: 80 PCAIKACSSL----FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFD 135
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ ++ +SW M G+ LN + A+ LFK + ++ + ++
Sbjct: 136 EIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDD------------------DD 177
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
M L M + V+S C+ + A + + IH FVIK GF+ V V N L+
Sbjct: 178 AMFLDSM-----------GLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLD 226
Query: 316 VYGKHGD--VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
Y K G+ V VA+ +F +I +K
Sbjct: 227 AYAKGGEGGVAVARKIFDQIVDK------------------------------------- 249
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA-NSVTISGLLSVCAESAALNIGR 432
+ +S+++++ +A +G EA ++FR++ KVV N++T+S +L + S AL IG+
Sbjct: 250 --DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
IH V+R+ + +++V +++MY KCG +E F++++ K++ +W +MI+GYGM+G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHG 367
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
AL F MI++G +P+ + FV+VL+ACSHAGL EG R F+ M F +EP +EHY
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY 427
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
CMVDLLGRAG LQ+A D+++ M M+P++ +W +LL +CR+HKN ++AE +++F L +
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDS 487
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
G YMLLS+IYA +GRW+D +VR+ K +GL K G S +E+ ++H+F G+
Sbjct: 488 SNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHP 547
Query: 673 DLKNVCEVLEELALQMENKGCVPDN 697
+ + E L EL ++ G V +
Sbjct: 548 QREKIYEFLAELNRKLLEAGYVSNT 572
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 119/230 (51%), Gaps = 11/230 (4%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGR--LFDARNVFETAPFDCKSSSLLWNSILR 105
+ +H+ +I G + + +L YA+ G + AR +F+ + +NSI+
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI---VDKDRVSYNSIMS 259
Query: 106 VNVSNGLYENALKLYVKMRKLGVLG-DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
V +G+ A +++ ++ K V+ + T V+ A G+ R G+ +H+ V++
Sbjct: 260 VYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRI----GKCIHDQVIR 315
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
MG + +V + +I MY K G++ + K FD+++ KN SW M +G+ ++ ALEL
Sbjct: 316 MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALEL 375
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAE 273
F M G+ PN++T+ S+L++ + G E F+ M+ R G+E G E
Sbjct: 376 FPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLE 425
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 184/455 (40%), Gaps = 108/455 (23%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++ C ++ + KQ H Q V G + F+++ ++ +Y+ G+L DAR VF+ P
Sbjct: 79 FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKM------RKLGVLGDGFTFPLVIRACKF 144
K + W S++R NG +A+ L+ + + D VI AC
Sbjct: 139 ---KRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSR 195
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ--MSDSFKLFDKVRVKNY 202
+ + + +H+ V++ GF V + N L+ YAK G+ ++ + K+FD++ K+
Sbjct: 196 VPA----KGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR 251
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELE------------------------------- 231
+S+N + S +A + + A E+F+R+
Sbjct: 252 VSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHD 311
Query: 232 -----GLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
GLE + + TS++ + +CGR+E FD M+ + +
Sbjct: 312 QVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSW--------------- 356
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK----NIVSWN 342
A+I YG HG A LF + + N +++
Sbjct: 357 ------------------------TAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFV 392
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
+++ + + AGL VE + + G P + + ++ G ++A DL ++
Sbjct: 393 SVLAACSHAGL---HVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449
Query: 403 MQLAKVVANSVTISGLLSVC-----AESAALNIGR 432
M++ +S+ S LL+ C E A +++ R
Sbjct: 450 MKMK---PDSIIWSSLLAACRIHKNVELAEISVAR 481
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 192/596 (32%), Positives = 330/596 (55%), Gaps = 51/596 (8%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYA-RFGRLFDARNVFETAPFDCKSSSLLWNS 102
+ +K++H L+V+G + + ++V+ YA + L A VFE ++ LWN+
Sbjct: 324 MEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIE---SPTTFLWNT 380
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
+LR + ++A+ Y K ++ G+ D TFP V++AC + + G+ +H+HV
Sbjct: 381 LLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKAC----AKTYAPKEGEQMHSHV 436
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
+++GF ++ + N LI +YA G + + +FD++ VK+ +S
Sbjct: 437 IKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVS------------------ 478
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC 282
W SL+ +++ R +E + LF++M+ ++ + V+S C
Sbjct: 479 -----------------WNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISAC 521
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
L M + ++ + E V++ N LI Y + G ++ A+ +FS++++KN V+ N
Sbjct: 522 THLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLN 581
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
A+I +YA+ G A ++F Q+ D +ISWS++I A++ ++L+LFR+
Sbjct: 582 AMIHAYAKGGNLVSAKKIFDQIPNKD--------LISWSSMICAYSQASHFSDSLELFRQ 633
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
MQ AKV ++V I+ +LS CA AL++G+ IH +V R ++ + +++N L++M+ KCGC
Sbjct: 634 MQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKTDTIMENSLIDMFAKCGC 693
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
++E VF ++E+KD ++WNS+I G NG + AL F M+ G +P+ V F+ VL A
Sbjct: 694 MQEALQVFTEMEEKDTLSWNSIILGLANNGFEDEALNIFYSMLTEGPRPNEVTFLGVLIA 753
Query: 523 CSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAY 582
C++ LV EG F+ M +EPQM+HY C+V +L RAG L++A + + MP+ P+
Sbjct: 754 CANKRLVQEGLDHFERMKTVHNLEPQMKHYGCVVGILSRAGQLEKAKNFINEMPLAPDPV 813
Query: 583 VWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
VW LL +C+ H N VAE ++ L +G YMLLSNIYA++ RW DA VR
Sbjct: 814 VWRILLGACKTHGNVAVAEVATKKLSELDPSNSGDYMLLSNIYASADRWSDALNVR 869
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 197/364 (54%), Gaps = 17/364 (4%)
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
KN+VSWN +IT +A G + A +F Q M NV+SW+ +I + E
Sbjct: 4 KNVVSWNVVITGFAGWGEIEYARLLFDQ--------MPCRNVVSWTGLIDGYTRACLYAE 55
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
A+ LFR M + + +T+ ++ + + +G +HG+ V+ + + V N L++
Sbjct: 56 AVALFRHMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLID 115
Query: 456 MYMKCGCLEEGHLVF-EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+Y K G ++ VF E +++++L++W S+ISG+ M+GL AL F EM AG +P+ +
Sbjct: 116 LYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRI 175
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F++V++ACSH GLV +G F MV E+ I+P+++H+ C++D+LGRAG L EA I++
Sbjct: 176 TFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEG 235
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
+P+E N VW LL C + ++ + I L E+ G + +LSN+ GR+ DA
Sbjct: 236 LPVEVNVIVWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDA 295
Query: 635 AKVRISAKTKGLKKVAGQSWI--------EVKRKIHMFSSGNSLQSDLKNVCEVLEELAL 686
+ R + + KV G + + E +K+H + L + + +V+ AL
Sbjct: 296 EQARKLLDERKIVKVPGLALVVTRSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYAL 355
Query: 687 QMEN 690
Q +
Sbjct: 356 QQSD 359
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/480 (23%), Positives = 213/480 (44%), Gaps = 60/480 (12%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
V++ +A +G + AR +F+ P C++ + W ++ LY A+ L+ M G+
Sbjct: 12 VITGFAGWGEIEYARLLFDQMP--CRNV-VSWTGLIDGYTRACLYAEAVALFRHMMAGGI 68
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
T V+ A +G G+++H + ++ G + + N LI +YAK+G +
Sbjct: 69 SPSEITVLAVVPAISNLGGILM----GEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQ 124
Query: 189 DSFKLFDK-VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
+S K+FD+ + +N +SW + SGFA++ ALELF M G+ PN +T+ S++++
Sbjct: 125 NSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINAC 184
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
+ G +E+ + F M V D H G +I
Sbjct: 185 SHGGLVEQGLAFFKSM--------------VYEYNIDPEIKHFGCIID------------ 218
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIE-EKNIVSWNALI---TSYAEAGLCDEAVEVFSQ 363
+ G+ G + A+ + + E N++ W L+ + Y E + A+++ S
Sbjct: 219 --------MLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGCCSKYGEVEMGKRAIKMISD 270
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
LE+ GG + S V+ E+A L + ++ KV GL V
Sbjct: 271 LERESGG-----DFAVLSNVLNELGRFSDAEQARKLLDERKIVKV-------PGLALVVT 318
Query: 424 ES-AALNIGREIHGHVVRVSMNKNILVQNGLLNMY-MKCGCLEEGHLVFEQIEKKDLITW 481
S + +++H H+V ++ + ++ Y ++ L H VFEQIE W
Sbjct: 319 RSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLW 378
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
N+++ G + ++A+ +++ E G KPD + F VL AC+ EG ++ +++
Sbjct: 379 NTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIK 438
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/539 (23%), Positives = 234/539 (43%), Gaps = 69/539 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+ +H + G + A + ++ +YA+ G + ++ VF+ D + + + W SI+
Sbjct: 92 EMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEM-LD-RRNLVSWTSIISGF 149
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+GL AL+L+ +MR+ G+ + TF VI AC G +F + V +
Sbjct: 150 AMHGLSVEALELFAEMRRAGIRPNRITFLSVINACSHGGLVEQGLAF---FKSMVYEYNI 206
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELFK 226
+ +I M + G++ ++ ++ + + V+ N I W ++ G + G +E+ K
Sbjct: 207 DPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILL-GCCSKY---GEVEMGK 262
Query: 227 RM--ELEGLEP----NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
R + LE +F +++L+ R E+ L D ++ ++V A+ V S
Sbjct: 263 RAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLD--ERKIVKVPGLALVVTRS 320
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG-KHGDVKVAQNLFSEIEEKNIV 339
A K +H ++ G + + + +I Y + D+ A +F +IE
Sbjct: 321 FVMMEAV----KKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTF 376
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
WN L+ A++ + P ++A+
Sbjct: 377 LWNTLLRGLAQS---------------------DAP------------------KDAIVF 397
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
++K Q + +++T +L CA++ A G ++H HV+++ +I V N L+++Y
Sbjct: 398 YKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAA 457
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
CG L +F+++ KD+++WNS+I GY + LA FE M + D V V V
Sbjct: 458 CGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKV 517
Query: 520 LSACSHAGLVNEGRRIFDMMVREFR---IEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
+SAC+H G + D MVR IE + ++D R G LQ A + M
Sbjct: 518 ISACTHLG----DWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQM 572
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 113/206 (54%), Gaps = 9/206 (4%)
Query: 199 VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD 258
+KN +SWN++ +GFA + + A LF +M N V+WT L+ + R E +
Sbjct: 3 MKNVVSWNVVITGFAGWGEIEYARLLFDQMPCR----NVVSWTGLIDGYTRACLYAEAVA 58
Query: 259 LFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG 318
LF M GI + V+ ++L MG+++HG+ +K G V N+LI +Y
Sbjct: 59 LFRHMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYA 118
Query: 319 KHGDVKVAQNLFSE-IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
K G V+ + +F E ++ +N+VSW ++I+ +A GL EA+E+F+++ + + RPN
Sbjct: 119 KIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRR----AGIRPNR 174
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKM 403
I++ +VI A + G E+ L F+ M
Sbjct: 175 ITFLSVINACSHGGLVEQGLAFFKSM 200
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 367/727 (50%), Gaps = 116/727 (15%)
Query: 37 LLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LL+ C K++ Q K +H +++ G FL ++++Y A+ VF+ C
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL-GDGFTFPLVIRACKFMGSFRFRF 152
+ S LWN ++ N +Y AL+L+ K+ L D +T+P V++AC + +++
Sbjct: 69 EIS--LWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGL----YKY 122
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+++H +++ G ++ + + L+GMYAK + LF+++ K+ WN + S +
Sbjct: 123 VLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCY 182
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR----------------------- 249
+ + ALE F M G EPN VT T+ +SS AR
Sbjct: 183 YQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDS 242
Query: 250 ------------CGRLEETMDLFDMMRKR------------------------------- 266
CG LE +++F+ M K+
Sbjct: 243 FISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNE 302
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
G++ ++ ++ VC+ A GK +HG+ I+ + VF+ ++L+ +Y K G V++A
Sbjct: 303 GVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELA 362
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+N+F I + V+SW+ +I
Sbjct: 363 ENIFKLIP---------------------------------------KSKVVSWNVMISG 383
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
+ + G+ EAL LF +M+ + V +++T + +L+ C++ AAL G EIH ++ ++ N
Sbjct: 384 YVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNN 443
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+V LL+MY KCG ++E VF+ + K+DL++W SMI+ YG +G AL F EM++
Sbjct: 444 EVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQ 503
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
+ KPD V F+A+LSAC HAGLV+EG F+ MV + I P++EHY+C++DLLGRAG L
Sbjct: 504 SNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLH 563
Query: 567 EASDIVKNMP-MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
EA +I++ P + + + TL ++CR+H+N D+ +A + + + +Y+LLSN+Y
Sbjct: 564 EAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMY 623
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A++ +W++ VR K GLKK G SWIE+ +KI F ++ L+ V + L L+
Sbjct: 624 ASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLS 683
Query: 686 LQMENKG 692
ME++
Sbjct: 684 DHMEDES 690
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/616 (31%), Positives = 334/616 (54%), Gaps = 20/616 (3%)
Query: 75 RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFT 134
++GR+ ++ FE PF + + W + + V NGL ALKL+ ++ + GV + T
Sbjct: 130 KYGRVEESMWYFERNPFQ---NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVT 186
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
F V+RAC +G F G + V++ GF+ + + N LI + +MG++ + ++F
Sbjct: 187 FTSVVRACGELGDF----GLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVF 242
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
D++ ++ +SW + + D A +F M E N ++W+++++ +++ G E
Sbjct: 243 DRMEKRDVVSWTAILDAYVETGDLREARRIFDEMP----ERNEISWSAMIARYSQSGYAE 298
Query: 255 ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
E + LF M + G + A LS A L A G IHG V K G + VF+ ++LI
Sbjct: 299 EALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLI 358
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
+Y K G + +F I EKN+V WN+++ Y+ G +E E+F + +
Sbjct: 359 DLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPE-------- 410
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
N +SW +I + N + E+ L++F + ++ N T S +L CA A+L+ G +
Sbjct: 411 KNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNV 470
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
HG ++++ + +I V L +MY KCG + VFE++ +K+ I+W MI G +G
Sbjct: 471 HGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFA 530
Query: 495 ENALATFEEMIEAG-FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
+L FEEM P+ + ++VL ACSH GLV++G F+ M + + I+P+ +HY
Sbjct: 531 VESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYT 590
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
C+VDLL R+G L EA + ++ +P +P A W LL+ C+ +K+ +AE A +++ L
Sbjct: 591 CVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAEN 650
Query: 614 TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSD 673
+ Y+LLSNIYA++GRW D + +R + KGLKK G SW+EV+ ++H F S + S
Sbjct: 651 NSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQ 710
Query: 674 LKNVCEVLEELALQME 689
+ L+ L +M+
Sbjct: 711 SNEIYGTLQLLRSEMK 726
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 223/455 (49%), Gaps = 46/455 (10%)
Query: 167 FQGNVHIV-NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
F G+ +V N +I Y + G + + LFD++ +N +SW+ + SG + ++ F
Sbjct: 82 FDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYF 141
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
+R + N V+WT+ +S R G E + LF + + G+ V+ C +L
Sbjct: 142 ERNPFQ----NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGEL 197
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+G I G V+K GFE Y+ V N+LI + + G++ +A+ +F +E++++VSW A++
Sbjct: 198 GDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAIL 257
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+Y E G EA +F + M N ISWSA+I ++ +G EEAL LF KM
Sbjct: 258 DAYVETGDLREARRIFDE--------MPERNEISWSAMIARYSQSGYAEEALKLFSKMVQ 309
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
N + LS A AL+ G IHGHV ++ ++K++ + + L+++Y KCG ++
Sbjct: 310 EGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDD 369
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLG------------------------------- 494
G LVF+ I +K+++ WNSM+ GY +NG
Sbjct: 370 GRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQC 429
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
E L F ++ +G P+ F +VL AC+ +++G + +++ I+ +
Sbjct: 430 EKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIK-LGIQYDIFVGTA 488
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ D+ + G + + + + MP E N W ++
Sbjct: 489 LTDMYAKCGDIGSSKQVFERMP-EKNEISWTVMIQ 522
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 155/311 (49%), Gaps = 26/311 (8%)
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V N +I Y + G++ A+ LF E+ E+N VSW+ALI+ + G +E++ F +
Sbjct: 89 VSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFER----- 143
Query: 369 GGSMERP--NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
P NV+SW+A I F NG EAL LF ++ + V N VT + ++ C E
Sbjct: 144 -----NPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELG 198
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
+G I G VV+ + V N L+ + ++ G ++ VF+++EK+D+++W +++
Sbjct: 199 DFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILD 258
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
Y G A F+EM E + +++ A+++ S +G E ++F MV+E +
Sbjct: 259 AYVETGDLREARRIFDEMPER----NEISWSAMIARYSQSGYAEEALKLFSKMVQE-GFK 313
Query: 547 PQMEHYACMVDLLGRAGLLQEASDI---VKNMPMEPNAYVWGTLLN-SCRMHKNTDVAEA 602
P + +AC + L L +I V + ++ + ++ +L++ C+ K D
Sbjct: 314 PNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDD---- 369
Query: 603 MASQIFGLITE 613
+F LI E
Sbjct: 370 -GRLVFDLILE 379
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 110/236 (46%), Gaps = 16/236 (6%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSM-NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
++S C SA + G + ++ M +N + + L++ MK G +EE FE+ +
Sbjct: 88 VVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQ 147
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
++++W + ISG+ NGL AL F ++E+G +P+ V F +V+ AC G G I
Sbjct: 148 NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSIL 207
Query: 537 DMMVREFRIEPQMEHYA----CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
++V+ EHY ++ L R G + A + M + W +L++
Sbjct: 208 GLVVK-----AGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKR-DVVSWTAILDA-- 259
Query: 593 MHKNTDVAEAMASQIFGLITETTG-SYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
+ D+ E A +IF + E S+ + Y+ SG E+A K+ +G K
Sbjct: 260 YVETGDLRE--ARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFK 313
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
A + T LL + + G +H H+++ + + LL +Y+ C E +
Sbjct: 19 AYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQI 78
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
++ + DL+ N MIS Y G A F+EM E + V++ A++S G V
Sbjct: 79 VKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPER----NEVSWSALISGLMKYGRV 134
Query: 530 NEGRRIFD 537
E F+
Sbjct: 135 EESMWYFE 142
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 350 bits (899), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 209/696 (30%), Positives = 368/696 (52%), Gaps = 92/696 (13%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H+ ++ G +++AF+ A +++ Y+ G + AR+VFE CK ++W I+ V
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEG--ILCKDI-VVWAGIVSCYVE 224
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
NG +E++L+L +M G + + +TF ++A +G+F F S VH +L+ ++
Sbjct: 225 NGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKS----VHGQILKTCYEL 280
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
+ + L+ +Y ++G MSD+FK+F+++ + + W+ M + F N C+ A+
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAV------- 333
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
D+F MR+ + ++ +L+ CA
Sbjct: 334 ----------------------------DIFIRMREGFVVPNEFTLSSILNGCAIGKCSG 365
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+G+ +HG V+K GF+ V+V NALI V YA
Sbjct: 366 LGEQLHGLVVKVGFDLDVYVSNALIDV-------------------------------YA 394
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+ D AV++F++L NV+SW+ VI + + G G +AL++FR+ +V
Sbjct: 395 KCEKMDTAVKLFAELSS--------KNVVSWNTVIVGYENLGEGGKALNMFREALRNQVS 446
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
VT S L CA A++ +G ++HG ++ + K + V N L++MY KCG ++ V
Sbjct: 447 VTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTV 506
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F ++E D+ +WN++ISGY +GLG AL F+ M + KP+G+ F+ VLS CS+AGL+
Sbjct: 507 FNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLI 566
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
++G+ F+ M+ + IEP +EHY CMV L GR+G L +A ++++ +P EP+ +W +L+
Sbjct: 567 DQGQDCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLS 626
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
+ N + A A +I + + +Y+LLSN+YA + +W + A +R S K KG+KK
Sbjct: 627 ASMNQYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKE 686
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKN 709
G SWIE + +H FS G+S D+K + +LE L ++ G VPD + +L +M ++
Sbjct: 687 PGLSWIEHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEK 746
Query: 710 VKRIQRIRADNI----------KSKHRIVGFRNLKL 735
KR+ + ++ + S++RI+ +NL++
Sbjct: 747 DKRLW-VHSERLALAYGLVRMPSSRNRILIMKNLRI 781
>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
Length = 818
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 212/728 (29%), Positives = 356/728 (48%), Gaps = 60/728 (8%)
Query: 20 PFSIITYNNSLLDCFDHLLQQCKTIHQL-----KQVHNQLIVTGANASAFLAARVLSIYA 74
P+S + L DC D L T H++ Q+H+ + TG + + ++ + A
Sbjct: 41 PYSAGVLVSLLRDCAD--LHGDDTDHRVARRLAPQLHSLAVRTGLSRDPRVTCALVDLLA 98
Query: 75 RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFT 134
R GR + A D ++LWN + + ++ A+ ++ +M+ GV
Sbjct: 99 RLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVP----- 153
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
R R G+ VH + L++ + + L GMYA+ ++ + ++
Sbjct: 154 --------------RRR---GRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVL 196
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
D + + + WN + + A D ALEL RM G EPN TW ++LS +R GR
Sbjct: 197 DAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHGRDR 256
Query: 255 ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
E + + M K+G+ A ++ +L A+ G IH F ++ E V+ AL+
Sbjct: 257 EALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALV 316
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK-------- 366
+Y K G + AQ +F +E +N+ +WN+L+ YA AG D A+E+ ++K
Sbjct: 317 DMYAKCGRLDCAQKVFDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDIT 376
Query: 367 -----LDGGSME------------------RPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+ G SM PNV+SW+++I NG E++ +M
Sbjct: 377 TWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEM 436
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
Q V + VT+S LL CA A G+E+H +R + + +++V L++MY K G L
Sbjct: 437 QKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSKGGSL 496
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
++FE I++K+L+ N+M++G ++G G A+ F +M +G KPD + F A+L+AC
Sbjct: 497 VSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTALLTAC 556
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
GLV EG FD M ++ ++P E+YACMVDLL R G L EA D ++ P++P A
Sbjct: 557 RSMGLVTEGWEYFDGMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDPGASH 616
Query: 584 WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKT 643
WG LL C +H N +AE A +F L + +Y+L+ N+Y +++A ++ + K
Sbjct: 617 WGALLTGCSIHGNLALAEVAARNLFRLEPYNSANYLLMMNLYEYERMYDEAESLKYAMKA 676
Query: 644 KGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWE 703
+G+ G SWI++++ IH+F + + E L L Q++ G VPD I +
Sbjct: 677 RGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSCIAYN 736
Query: 704 MMGKKNVK 711
+ ++ K
Sbjct: 737 VQEEEKEK 744
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 221/664 (33%), Positives = 331/664 (49%), Gaps = 83/664 (12%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARF--GRLFDARNVFETAPFDCK 94
+LQQCKT L+QVH L+ T + VL A + A ++F K
Sbjct: 27 ILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHID---K 83
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
S +N ++R +NAL L+ KM + V D FTF V++AC M + R
Sbjct: 84 PESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALRE---- 139
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ VH +L+ GF+ N + N LI MYA GQ+ + +FD + ++ ++WN
Sbjct: 140 GEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWN-------- 191
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
S+LS + + G +E + LF + + IE
Sbjct: 192 ---------------------------SMLSGYTKNGLWDEVVKLFRKILELRIEFDDVT 224
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ VL C LA +G++I +++ G
Sbjct: 225 MISVLMACGRLANLEIGELIGEYIVSKGLR------------------------------ 254
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
+N +LI YA+ G D A ++F +++K D V++WSA+I +A R +
Sbjct: 255 -RNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRD--------VVAWSAMISGYAQADRCK 305
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
EAL+LF +MQ V N VT+ +L CA A G+ +H ++ + M + + L+
Sbjct: 306 EALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLI 365
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+ Y KCG ++ VF+++ K++ TW ++I G NG G+ AL F M+E KP+ V
Sbjct: 366 DFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDV 425
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F+ VLSACSHA LV++GR +F+ M R+F IEP++EHY CMVD+LGRAG L+EA + N
Sbjct: 426 TFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDN 485
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP PNA VW TLL SCR HKN ++AE I L +G Y+LLSN YA GR EDA
Sbjct: 486 MPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDA 545
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
+VR K K +KK+ G S IE+ +H F S + K + + L+++ Q++ G V
Sbjct: 546 IRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYV 605
Query: 695 PDND 698
P+ D
Sbjct: 606 PNTD 609
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 178/374 (47%), Gaps = 49/374 (13%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C K + + +QVH ++ +G ++ F+ ++ +YA G++ AR+VF+ P
Sbjct: 124 FSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMP 183
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ S + WNS+L NGL++ +KL+ K+ +L + D T V+ AC + +
Sbjct: 184 ---ERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANL-- 238
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+++ +++ G + N + LI MYAK GQ+ + KLFD++ ++ ++W+ M S
Sbjct: 239 --EIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMIS 296
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
G+A C AL LF M+ + PN VT S+L S
Sbjct: 297 GYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYS------------------------ 332
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
CA L A GK +H ++ K + V + LI Y K G + + +F
Sbjct: 333 -----------CAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVF 381
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
E+ KN+ +W ALI A G A+E FS + + D +PN +++ V+ A +
Sbjct: 382 KEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDV----KPNDVTFIGVLSACSHA 437
Query: 391 GRGEEALDLFRKMQ 404
++ LF M+
Sbjct: 438 CLVDQGRHLFNSMR 451
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 192/551 (34%), Positives = 312/551 (56%), Gaps = 51/551 (9%)
Query: 154 FGQI--VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL--FDKVRVKNYISWNMMF 209
F QI VH H+++ G +++ +LI M K+ S+ L F +V NY
Sbjct: 55 FSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQV---NY------- 104
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
PN WT+++ +A G L E+ + + MR+ G+
Sbjct: 105 -------------------------PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVG 139
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHG-FVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
+ + + C +GK +H ++ GGF ++V N++I +Y K G + A+
Sbjct: 140 PVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARK 199
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+F E+ E+++VSW LI +YA+ G + A +F L D +++W+A++ +A
Sbjct: 200 VFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKD--------MVAWTAMVTGYA 251
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK--N 446
NGR +EAL+ F+KMQ + + VT++G++S CA+ A+ I R N
Sbjct: 252 QNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGN 311
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
++V + L++MY KCG +E + VFE ++++++ +++SMI GY M+G +AL F +M++
Sbjct: 312 VVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLK 371
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
+P+ V F+ +LSACSHAGLV +GR++F M + F + P +HYACMVDLLGRAG L+
Sbjct: 372 TEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLE 431
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
EA D+VK MPMEPN VWG LL +CR+H N D+A+ A+++F L G+Y+LLSNIYA
Sbjct: 432 EALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYA 491
Query: 627 ASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKR-KIHMFSSGNSLQSDLKNVCEVLEELA 685
++GRWE+ +K+R + KG KK G SW E K +IH F +G++ + + L++L
Sbjct: 492 SAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLI 551
Query: 686 LQMENKGCVPD 696
++ + G P+
Sbjct: 552 ERLRSHGYKPN 562
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 213/495 (43%), Gaps = 75/495 (15%)
Query: 20 PFSIITYNNSLLDC-FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGR 78
PF + + LL+ +L C Q+KQVH +I G + +++ +++ + +
Sbjct: 30 PFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDV 89
Query: 79 LFDARN--VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
+ VF + + LW +++R GL + Y +MR+ GV FTF
Sbjct: 90 PMGSYPLLVFGQVNY---PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFS 146
Query: 137 LVIRACK----------------FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIV------ 174
+ +AC +G F G + + ++ GF G V
Sbjct: 147 ALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSE 206
Query: 175 ------NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
ELI YAK G M + LFD + K+ ++W M +G+A N ALE F++M
Sbjct: 207 RDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKM 266
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL--- 285
+ G+E + VT ++S+ A+ G ++ + D+ + G G VV S D+
Sbjct: 267 QDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGF--GPSGNVVVGSALIDMYSK 324
Query: 286 --AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI----V 339
+ D KV V+K E VF +++I Y HG A LF ++ + I V
Sbjct: 325 CGSPDEAYKVFE--VMK---ERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKV 379
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
++ ++++ + AGL ++ ++F+++EK G + P+ ++ ++ G EEALDL
Sbjct: 380 TFIGILSACSHAGLVEQGRQLFAKMEKFFGVA---PSPDHYACMVDLLGRAGCLEEALDL 436
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH--VVRVSMNKNI-LVQNG---- 452
+ M + N LL C IHG+ + +++ N+ L NG
Sbjct: 437 VKTMPME---PNGGVWGALLGAC----------RIHGNPDIAQIAANELFKLEPNGIGNY 483
Query: 453 --LLNMYMKCGCLEE 465
L N+Y G EE
Sbjct: 484 ILLSNIYASAGRWEE 498
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 124/313 (39%), Gaps = 34/313 (10%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH--LVFEQIEK 475
L+S+ + + +++H H++R +++ V L+ M K + LVF Q+
Sbjct: 45 LMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNY 104
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
+ W +MI GY + GL + + M G P F A+ AC A ++ G+++
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
+ + M+DL + G L A + M E + W L+ + +
Sbjct: 165 HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMS-ERDVVSWTELIVAYAKYG 223
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK------- 648
+ + A + L ++ ++ + YA +GR ++A + + G++
Sbjct: 224 DMESASGLFDD---LPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAG 280
Query: 649 ----------VAGQSWI-EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
V +WI ++ + SGN V+ + M +K PD
Sbjct: 281 VISACAQLGAVKHANWIRDIAERSGFGPSGNV----------VVGSALIDMYSKCGSPDE 330
Query: 698 DIILWEMMGKKNV 710
++E+M ++NV
Sbjct: 331 AYKVFEVMKERNV 343
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 207/687 (30%), Positives = 362/687 (52%), Gaps = 88/687 (12%)
Query: 19 RPFSIITYNNSLLD---CFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYAR 75
R FS+ ++ L F +L+ C+T+ ++H + G ++AA ++ +Y+R
Sbjct: 138 RCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSR 197
Query: 76 FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
+ + +AR +F+ P S WN+++ +G + AL L +R + D T
Sbjct: 198 YKAVGNARILFDEMPVRDMGS---WNAMISGYCQSGNAKEALTLSNGLRAM----DSVTV 250
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
++ AC G F + G +H++ ++ G + + + N+LI +YA+ G++ D K+FD
Sbjct: 251 VSLLSACTEAGDF----NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFD 306
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ V++ ISWN + + LN A+ LF+ M L ++P+ +T SL
Sbjct: 307 RMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL------------ 354
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
A +LS D+ A + + GF ++ G+ F++
Sbjct: 355 --------------------ASILSQLGDIRA---CRSVQGFTLRKGW----FLE----- 382
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
D+ + NA++ YA+ GL D A VF+ L D
Sbjct: 383 ------DITIG---------------NAVVVMYAKLGLVDSARAVFNWLPNTD------- 414
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQL-AKVVANSVTISGLLSVCAESAALNIGREI 434
VISW+ +I +A NG EA++++ M+ ++ AN T +L C+++ AL G ++
Sbjct: 415 -VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
HG +++ + ++ V L +MY KCG LE+ +F QI + + + WN++I+ +G +G G
Sbjct: 474 HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHG 533
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
E A+ F+EM++ G KPD + FV +LSACSH+GLV+EG+ F+MM ++ I P ++HY C
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC 593
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
MVD+ GRAG L+ A +K+M ++P+A +WG LL++CR+H N D+ + + +F + E
Sbjct: 594 MVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEH 653
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
G ++LLSN+YA++G+WE ++R A KGL+K G S +EV K+ +F +GN
Sbjct: 654 VGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMY 713
Query: 675 KNVCEVLEELALQMENKGCVPDNDIIL 701
+ + L L +++ G VPD+ +L
Sbjct: 714 EEMYRELTALQAKLKMIGYVPDHRFVL 740
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 210/493 (42%), Gaps = 103/493 (20%)
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
NV I +L+ +Y +G ++ + FD ++ ++ +WN+M SG+ + + F
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 230 L-EGLEPNFVTWTSLLSS--------------------------------HARCGRLEET 256
L GL P++ T+ S+L + ++R +
Sbjct: 145 LSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 257 MDLFDMMRKRGI-----------EVGAEAIAVVLS----------------VCADLAADH 289
LFD M R + + G A+ LS C + +
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFN 264
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
G IH + IK G E +FV N LI +Y + G ++ Q +F + ++++SWN++I +Y
Sbjct: 265 RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY- 323
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+L+ E+P A+ LF++M+L+++
Sbjct: 324 ----------------ELN----EQP------------------LRAISLFQEMRLSRIQ 345
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVS-MNKNILVQNGLLNMYMKCGCLEEGHL 468
+ +T+ L S+ ++ + R + G +R ++I + N ++ MY K G ++
Sbjct: 346 PDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARA 405
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG-FKPDGVAFVAVLSACSHAG 527
VF + D+I+WN++ISGY NG A+ + M E G + +V+VL ACS AG
Sbjct: 406 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 465
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
+ +G ++ +++ + + + D+ G+ G L++A + +P N+ W TL
Sbjct: 466 ALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTL 523
Query: 588 LNSCRMHKNTDVA 600
+ H + + A
Sbjct: 524 IACHGFHGHGEKA 536
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 154/373 (41%), Gaps = 60/373 (16%)
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ + + C +L + K +H ++ V + L+ +Y G+V +A++ F
Sbjct: 55 DDVHTLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDH 111
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER---PNVIS---------- 379
I+ +++ +WN +I+ Y AG E + FS G + + P+V+
Sbjct: 112 IQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNK 171
Query: 380 -----------WSAVIGA-----FASNGRGEEALDLFRKMQLAKVVANSVTISG------ 417
W + A ++ A LF +M + + + + ISG
Sbjct: 172 IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGN 231
Query: 418 ---------------------LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
LLS C E+ N G IH + ++ + + V N L+++
Sbjct: 232 AKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y + G L + VF+++ +DLI+WNS+I Y +N A++ F+EM + +PD +
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
+++ S S G + R + +R+ + +V + + GL+ A + +P
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 577 MEPNAYVWGTLLN 589
+ W T+++
Sbjct: 412 -NTDVISWNTIIS 423
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 219/675 (32%), Positives = 342/675 (50%), Gaps = 85/675 (12%)
Query: 30 LLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
+L F LL+ C L + VH QL G ++ A A + ++YA+ R DAR VF
Sbjct: 58 VLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVF 117
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL-GVLGDGFTFPLVIRACKFM 145
+ P + WN+++ NGL A+++ V+M++ G D T V+ AC
Sbjct: 118 DRMPV---RDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANA 174
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
+ H ++ G + V++ ++ Y K G + + +FD + KN +SW
Sbjct: 175 RALAACRE----AHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSW 230
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
N M G+A N D AL LF RM EG++ VT S+L++ CG L
Sbjct: 231 NAMIDGYAQNGDSREALALFNRMVEEGVD---VTDVSVLAALQACGELG----------- 276
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
C D G +H +++ G + V V NALI +Y K V +
Sbjct: 277 ----------------CLD-----EGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDL 315
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A ++F E++ + VSWNA+I A+ G ++AV +F+
Sbjct: 316 ASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFT----------------------- 352
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
+MQL V +S T+ ++ A+ + R IHG+ +R+ +++
Sbjct: 353 ----------------RMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQ 396
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
++ V L++MY KCG + ++F ++ +ITWN+MI GYG +G G+ A+ FEEM
Sbjct: 397 DVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMK 456
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
G P+ F++VLSACSHAGLV+EGR F M ++ +EP MEHY MVDLLGRAG L
Sbjct: 457 SIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKL 516
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
EA ++ MPM+P V+G +L +C++HKN ++AE A +IF L + ++LL+NIY
Sbjct: 517 DEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIY 576
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A + W+D A+VR + + GL+K G S I++K +IH F SG++ K + L +L
Sbjct: 577 ANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLI 636
Query: 686 LQMENKGCVPDNDII 700
+++ G VPD D I
Sbjct: 637 EEIKAVGYVPDTDSI 651
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 136/325 (41%), Gaps = 73/325 (22%)
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
D AL F M G P T+TSLL + RG
Sbjct: 39 DLPAALAAFVAMSSAGAPPVLRTFTSLLK----------------LCAARG--------- 73
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
DLA G+ +H + G + AL +Y K A+ +F + +
Sbjct: 74 -------DLAT---GRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVR 123
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
+ V+WNAL+ YA GL A+E+ ++++ +G ERP
Sbjct: 124 DRVAWNALVAGYARNGLARMAMEMVVRMQEEEG---ERP--------------------- 159
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
+S+T+ +L CA + AL RE H +R + + + V +L+
Sbjct: 160 --------------DSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDA 205
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCG + +VF+ + K+ ++WN+MI GY NG ALA F M+E G V+
Sbjct: 206 YCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSV 265
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVR 541
+A L AC G ++EG R+ +++VR
Sbjct: 266 LAALQACGELGCLDEGMRVHELLVR 290
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 5/210 (2%)
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
AL F M A T + LL +CA L GR +H + ++ L L N
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI-EAGFKPDGV 514
MY KC + VF+++ +D + WN++++GY NGL A+ M E G +PD +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
V+VL AC++A + R +R +E + ++D + G ++ A +
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRS-GLEELVNVATAILDAYCKCGDIRAARVVFDW 221
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
MP + N+ W +++ +N D EA+A
Sbjct: 222 MPTK-NSVSWNAMIDG--YAQNGDSREALA 248
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 201/643 (31%), Positives = 324/643 (50%), Gaps = 81/643 (12%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H +V G +++ F+A+ ++ +Y +F R+ AR VF+ P ++LWN+++ V
Sbjct: 125 LHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMP---DRDTVLWNTMITGLVR 181
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
N Y+++++++ M GV D T V+ A M + G + L++GF
Sbjct: 182 NCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKV----GMGIQCLALKLGFHF 237
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
+ +++ LI +++K + + LF +R + +S+N + SG F C+
Sbjct: 238 DDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISG----FSCN---------- 283
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
G E + F + G V + + ++ V + H
Sbjct: 284 ---------------------GETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLH 322
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+ I GF +K G V AL +Y + ++ +A+ LF E EK
Sbjct: 323 LACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKT------------ 370
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
V +W+A+I +A +G E A+ LF++M +
Sbjct: 371 ---------------------------VAAWNAMISGYAQSGLTEMAISLFQEMMTTEFT 403
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
N VTI+ +LS CA+ AL+ G+ +H + ++ +NI V L++MY KCG + E +
Sbjct: 404 PNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQL 463
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F+ +K+ +TWN+MI GYG++G G+ AL F EM+ GF+P V F++VL ACSHAGLV
Sbjct: 464 FDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLV 523
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
EG IF MV ++RIEP EHYACMVD+LGRAG L++A + ++ MP+EP VWGTLL
Sbjct: 524 REGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLG 583
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
+C +HK+T++A + ++F L G Y+LLSNIY+ + AA VR + K + L K
Sbjct: 584 ACMIHKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKT 643
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
G + IEV H+F G+ S ++ LEEL +M G
Sbjct: 644 PGCTLIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMG 686
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 219/675 (32%), Positives = 342/675 (50%), Gaps = 85/675 (12%)
Query: 30 LLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
+L F LL+ C L + VH QL G ++ A A + ++YA+ R DAR VF
Sbjct: 58 VLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVF 117
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL-GVLGDGFTFPLVIRACKFM 145
+ P + WN+++ NGL A+++ V+M++ G D T V+ AC
Sbjct: 118 DRMPV---RDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANA 174
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
+ H ++ G + V++ ++ Y K G + + +FD + KN +SW
Sbjct: 175 RALAACRE----AHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSW 230
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
N M G+A N D AL LF RM EG++ VT S+L++ CG L
Sbjct: 231 NAMIDGYAQNGDSREALALFNRMVEEGVD---VTDVSVLAALQACGELG----------- 276
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
C D G +H +++ G + V V NALI +Y K V +
Sbjct: 277 ----------------CLD-----EGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDL 315
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A ++F E++ + VSWNA+I A+ G ++AV +F+
Sbjct: 316 ASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFT----------------------- 352
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
+MQL V +S T+ ++ A+ + R IHG+ +R+ +++
Sbjct: 353 ----------------RMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQ 396
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
++ V L++MY KCG + ++F ++ +ITWN+MI GYG +G G+ A+ FEEM
Sbjct: 397 DVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMK 456
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
G P+ F++VLSACSHAGLV+EGR F M ++ +EP MEHY MVDLLGRAG L
Sbjct: 457 SIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKL 516
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
EA ++ MPM+P V+G +L +C++HKN ++AE A +IF L + ++LL+NIY
Sbjct: 517 DEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIY 576
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A + W+D A+VR + + GL+K G S I++K +IH F SG++ K + L +L
Sbjct: 577 ANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLI 636
Query: 686 LQMENKGCVPDNDII 700
+++ G VPD D I
Sbjct: 637 EEIKAVGYVPDTDSI 651
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 137/329 (41%), Gaps = 73/329 (22%)
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
A D AL F M G P T+TSLL + RG
Sbjct: 35 AARSDLPAALAAFVAMSSAGAPPVLRTFTSLLK----------------LCAARG----- 73
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
DLA G+ +H + G + AL +Y K A+ +F
Sbjct: 74 -----------DLAT---GRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDR 119
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ ++ V+WNAL+ YA GL A+E+ ++++ +G ERP
Sbjct: 120 MPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEG---ERP----------------- 159
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
+S+T+ +L CA + AL RE H +R + + + V
Sbjct: 160 ------------------DSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATA 201
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
+L+ Y KCG + +VF+ + K+ ++WN+MI GY NG ALA F M+E G
Sbjct: 202 ILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVT 261
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
V+ +A L AC G ++EG R+ +++VR
Sbjct: 262 DVSVLAALQACGELGCLDEGMRVHELLVR 290
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 101/220 (45%), Gaps = 7/220 (3%)
Query: 388 ASNGRGE--EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
AS R + AL F M A T + LL +CA L GR +H + ++
Sbjct: 33 ASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDS 92
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
L L NMY KC + VF+++ +D + WN++++GY NGL A+ M
Sbjct: 93 EALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQ 152
Query: 506 -EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
E G +PD + V+VL AC++A + R +R +E + ++D + G
Sbjct: 153 EEEGERPDSITLVSVLPACANARALAACREAHAFAIRS-GLEELVNVATAILDAYCKCGD 211
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
++ A + MP + N+ W +++ +N D EA+A
Sbjct: 212 IRAARVVFDWMPTK-NSVSWNAMIDG--YAQNGDSREALA 248
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 212/656 (32%), Positives = 335/656 (51%), Gaps = 81/656 (12%)
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL 129
+S Y R G + +AR VF+ P ++ + WN+++ + +AL L+ +M
Sbjct: 26 ISRYGRIGDIHNARKVFDNTPLPQRTIAS-WNAMVSAYFESHKPRDALLLFDQMP----- 79
Query: 130 GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD 189
Q N N +I Y K G ++D
Sbjct: 80 --------------------------------------QRNTVSFNGMISGYVKNGMVAD 101
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
+ K+FD + +N +SW M G+ +G +E +++ E N V+WT ++ +
Sbjct: 102 ARKVFDVMPERNVVSWTSMVRGYVQ----EGMVEEAEKLFWEMPRRNVVSWTVMIGGLLK 157
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFV 309
R+++ LFDM+ ++ + V I C D ++ ++ VF
Sbjct: 158 ESRIDDAKKLFDMIPEKDVVVVTNMIG---GYCQVGRLDEARELFDEMKVRN-----VFT 209
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ------ 363
++ Y K+G V VA+ LF + E+N VSW A++ Y ++G EA E+F
Sbjct: 210 WTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWI 269
Query: 364 -------LEKLDGGSMERPNVI----------SWSAVIGAFASNGRGEEALDLFRKMQLA 406
L+ G M R ++ +W+A+I F G EAL LF +MQ
Sbjct: 270 VACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQRE 329
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
V N ++ +LSVCA A+L+ GR++H +VR ++++ V + L+ MY+KCG L
Sbjct: 330 GVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRA 389
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
+F + KD++ WNSMI+GY +GLGE AL F +M +G +PD V F+ VLSACS++
Sbjct: 390 KGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYS 449
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
G V EG IF+ M +++EP +EHYACMVDLLGRAG + EA ++V+ MPMEP+A VWG
Sbjct: 450 GKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGA 509
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL +CR H D+AE ++ L + G Y+LLS++YA GRW D +R + +
Sbjct: 510 LLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRRVI 569
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKN-VCEVLEELALQMENKGCVPDNDIIL 701
K G SWIEV++K+HMF+ G+S ++ + ++LE+L+ + G PD +L
Sbjct: 570 -KFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPDGSFVL 624
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 153/342 (44%), Gaps = 87/342 (25%)
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM 123
F ++S YA+ GR+ AR +FE P + + + W ++L +G + A +L+ M
Sbjct: 208 FTWTTMVSGYAKNGRVDVARKLFEVMP---ERNEVSWTAMLMGYTQSGRMKEAFELFEAM 264
Query: 124 RKLGVLGDGFTFPLV-IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
P+ I AC M +LQ G G +H A
Sbjct: 265 ------------PVKWIVACNEM----------------ILQFGLAGEMH--------RA 288
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
+M +F+ ++ ++ +WN M F AL LF RM+ EG+ NF S
Sbjct: 289 RM--------MFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNF---PS 337
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
++S VLSVCA LA+ G+ +H +++
Sbjct: 338 MIS--------------------------------VLSVCASLASLDHGRQVHARLVRSE 365
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
F+ ++V + LI +Y K GD+ A+ +F+ K++V WN++IT Y++ GL +EA+ VF
Sbjct: 366 FDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFH 425
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+ S +P+ +++ V+ A + +G+ +E ++F M+
Sbjct: 426 DM----CSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMK 463
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 142/321 (44%), Gaps = 41/321 (12%)
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
++ +++ S + I+ Y G A +VF D + + + SW+A++ A+ + +
Sbjct: 14 VQARSLCSNTSAISRYGRIGDIHNARKVF------DNTPLPQRTIASWNAMVSAYFESHK 67
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
+AL LF +M N+V+ +G++S ++ + R+ V V +N++
Sbjct: 68 PRDALLLFDQMPQ----RNTVSFNGMISGYVKNGMVADARK----VFDVMPERNVVSWTS 119
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
++ Y++ G +EE +F ++ ++++++W MI G L E+ + +++ + + D
Sbjct: 120 MVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGL----LKESRIDDAKKLFDMIPEKD 175
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFD-MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
V ++ G ++E R +FD M VR + + MV + G + A +
Sbjct: 176 VVVVTNMIGGYCQVGRLDEARELFDEMKVR------NVFTWTTMVSGYAKNGRVDVARKL 229
Query: 572 VKNMPMEPNAYVWGTLL----NSCRMHKNTDVAEAMASQI----------FGLITETTGS 617
+ MP E N W +L S RM + ++ EAM + FGL E +
Sbjct: 230 FEVMP-ERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRA 288
Query: 618 YMLLSNIYAAS-GRWEDAAKV 637
M+ + G W KV
Sbjct: 289 RMMFEGMKERDEGTWNAMIKV 309
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 196/677 (28%), Positives = 349/677 (51%), Gaps = 88/677 (12%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
+L D LL+QC + L+Q+H Q+I+ + FL R + + +A +F
Sbjct: 27 QQTLTDKLLSLLKQCTSTKSLQQIHTQMIINAIHKPNFLLHRFIDL----KDFNNASLLF 82
Query: 87 ETAPFDCKSSSLLWNSILR-VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
P+ + +N ++R + + + ++ Y +M+ G+ + FT+P V AC +
Sbjct: 83 SQIPY---PNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANL 139
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
+ GQ H+ VL+ G + H+ + LI MY++ G++ + ++FD++
Sbjct: 140 ----LVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEIS------- 188
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
E + V+W S++S ++R G + + LF MR
Sbjct: 189 ----------------------------EKDLVSWNSMISGYSRMGYAGDAVGLFGEMRD 220
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
G E + +L C DL +G I GFV++ + FV +ALI +YGK GD+
Sbjct: 221 AGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSS 280
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A+ +F M + +V++W+A+I
Sbjct: 281 ARRVFDR---------------------------------------MVKKDVVTWNAMIT 301
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
+A NG +EA+ LF M+ + V + +T+ G+LS CA AL+ G+ + + +
Sbjct: 302 GYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQN 361
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
+I V L++MY KCG L++ VFE + +K+ ++WN+MIS +G + +L+ F+ M
Sbjct: 362 DIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMS 421
Query: 506 EAG--FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
+ G +P+ ++F+ VLSAC HAGLV+EGR++FD+M F + P++EH++CMVDLL RAG
Sbjct: 422 KEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAG 481
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
+ EA D ++ MP +P+ V G LL +C+ +N DV+E + + + +G+Y++ S
Sbjct: 482 HVHEAWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSK 541
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
I+A RW+D+A++R+ + +G+ K G SWIE++ ++H F +G+ L +++C+V+
Sbjct: 542 IFANMKRWDDSARMRVLMRQRGVTKTPGCSWIEIENQVHEFHAGDVLHFISQDMCQVINL 601
Query: 684 LALQMENKGCVPDNDII 700
L +M+ +G P D +
Sbjct: 602 LNEEMKVEGYGPKVDFL 618
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 183/390 (46%), Gaps = 56/390 (14%)
Query: 14 PSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIY 73
P+N + PF I N L+ +H QC H+ ++ +G A + ++++Y
Sbjct: 124 PNNFTYPFVFIACANLLV--LNH--GQC--------AHSGVLKSGLCADGHVRHSLITMY 171
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
+R G L AR VF+ + + WNS++ G +A+ L+ +MR G D
Sbjct: 172 SRCGELGCARRVFDEIS---EKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEM 228
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
T ++ AC +G G + V++ N + + LIGMY K G +S + ++
Sbjct: 229 TLVSILGACGDLGDL----GLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRV 284
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FD++ K+ ++WN M +G+A N D A+ LF M G+ P+ +T +LS+
Sbjct: 285 FDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSA------- 337
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
CA + A GK + + + G ++ ++V AL
Sbjct: 338 ----------------------------CASIGALDFGKWLDTYASERGLQNDIYVSTAL 369
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
I +Y K G + A +F ++ +KN VSWNA+I++ A G E++ +F ++ K +GG++
Sbjct: 370 IDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSK-EGGAV- 427
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKM 403
RPN IS+ V+ A G +E LF M
Sbjct: 428 RPNDISFIGVLSACVHAGLVDEGRQLFDLM 457
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 218/732 (29%), Positives = 374/732 (51%), Gaps = 97/732 (13%)
Query: 10 HQFSPSNPSRPFSIITYNNS-LLDC-FDHLLQ-QCKTIHQLKQVHNQLIVTGANASAFLA 66
H F PS PF I +++S L+C D L Q +T+ L + H +I TG + F++
Sbjct: 9 HLFRRLFPS-PFQISYHSSSNYLNCHIDSFLSNQTQTLQSLHKSHALIITTGNANNVFIS 67
Query: 67 ARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL 126
++++S+YA F + + VF++ + + LWNSI++ + SNG Y A Y++MR
Sbjct: 68 SKLISLYASFRKPHSSTYVFDSTN---QKDTFLWNSIIKSHFSNGNYFKAFDFYIQMRYD 124
Query: 127 GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG-FQGNVHIVNELIGMYAKMG 185
+ FT P+++ C + G+ +H V + G F N + + + MYAK G
Sbjct: 125 NTPPNQFTIPMIVATCAEL----LWLEEGKYIHGLVSKSGLFAENSAVGSSFVYMYAKCG 180
Query: 186 QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG----------LEP 235
M D+ +FD++ V++ +SW + G+ N D + LE M G LE
Sbjct: 181 VMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEG 240
Query: 236 NF----------------------------VTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
F V +SLLS +++CG +EE + F + +
Sbjct: 241 GFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKD 300
Query: 268 IEVGAEAIAV---------VLSVCADLAADHM----------------------GKVIHG 296
+ I V L++ D+ D + GK HG
Sbjct: 301 VFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGNSMMVREGKAFHG 360
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL--- 353
+++ + V NAL+ +Y K G + A+ LF + E + SWN ++ Y +
Sbjct: 361 LIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVHEWSKESWNTMVFGYVHCYIIKN 420
Query: 354 -CDEAVEVFSQLEKL--DGGSME---------RPNVISWSAVIGAFASNGRGEEALDLFR 401
DE V + + L + GG++ + +V++W+ +I ++ +G EA+ LF
Sbjct: 421 SVDEDVSIANSLIDMYGKGGNLSIAWKMFCRTQRDVVTWNTLISSYTHSGHYAEAITLFD 480
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+M K+ NS T+ +LS C +L G+ +H ++ N+ + L++MY KCG
Sbjct: 481 EMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTALVDMYAKCG 540
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
LE+ +F +++KD+I+WN MISGYG++G +A+ F++M ++ KP+ + F+++LS
Sbjct: 541 QLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPNAITFLSLLS 600
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
AC+HAG V+EG+++FD M + + I+P ++H+ACM DLLGR+G LQEA D+V++MP+ P+
Sbjct: 601 ACTHAGYVDEGKQLFDRM-QYYSIKPNLKHFACMADLLGRSGNLQEAEDLVQSMPICPDG 659
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISA 641
VWGTLL++C++H ++ +A E G Y++LSN+Y + G+W++A + R
Sbjct: 660 GVWGTLLSACKIHNEIEIGIRVAKCAIESDPENDGYYIMLSNMYGSMGKWDEAERARELM 719
Query: 642 KTKGLKKVAGQS 653
K +G+ K AG S
Sbjct: 720 KERGIGKRAGWS 731
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 215/699 (30%), Positives = 361/699 (51%), Gaps = 63/699 (9%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARF-GRLFDARNVFETAPFDCKS 95
L + I QL+Q H L+ ++ + + +L R ++F ++P
Sbjct: 7 LASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSP---SP 63
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ +++ +L+ G + + L+ L + F + +I K G G
Sbjct: 64 DASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLI---KLAGKS------G 114
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ H +VL++G + I N ++ MYAK GQ+ + LF+++ + WN M SG +
Sbjct: 115 NLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKS 174
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE--------------------- 254
+ A+ LF M N +TWTS+++ +A+ G LE
Sbjct: 175 GNETEAVVLFNMMPAR----NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQ 230
Query: 255 ----------ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
E ++LF M + GI V +S C+ + + I + +
Sbjct: 231 SAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIV 290
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEI-EEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
FVK AL+ ++ K G++++A+N+F E+ ++N V+WN +I++Y G A E+F
Sbjct: 291 LNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDN 350
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM-QLAKVVANSVTISGLLSVC 422
+ K D V+SW+++I +A NG +++LF++M + + VTI+ +LS C
Sbjct: 351 MPKRD--------VVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSAC 402
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
AL + + V ++ I N L+ MY KCG + + H +F+ + +D++++N
Sbjct: 403 GHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFN 462
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
++ISG+ NG G+ A+ M E G +PD V ++ VL+ACSHAGL+NEG+ +F +
Sbjct: 463 TLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-- 520
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
P ++HYACMVDLLGRAG L EA ++++MPM+P+A V+G+LLN+ R+HK + E
Sbjct: 521 ---APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGEL 577
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
AS++F L + G+Y+LLSNIYA+ GRWED +VR K GLKK G SW+E K ++H
Sbjct: 578 AASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVH 637
Query: 663 MFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
F+ G+ K++ ++L EL +M+ G V D L
Sbjct: 638 KFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCAL 676
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 349 bits (896), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 207/690 (30%), Positives = 357/690 (51%), Gaps = 51/690 (7%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
LK++ ++I G + L + ++++Y + L AR V E P WN L
Sbjct: 8 LKKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPI---QDVQQWNQKLSS 64
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
S + A++L+ MR + + F F +I A +G + G+ +H V + G
Sbjct: 65 ANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHY----GESIHACVCKYG 120
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F+ ++ I N + MY K + + ++ F + ++N S N + SGF CD +
Sbjct: 121 FESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILI 180
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE---AIAVVLSVC- 282
++ +EG EPN T+ S+L + A G L E + + K GI + ++ V + C
Sbjct: 181 QLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCG 240
Query: 283 -ADLAADHMGKV-----------IHGFVIKG--------------GFEDYVFVKNALICV 316
A+ A G++ I GFV +G GF ++ +++
Sbjct: 241 SANYACKVFGEIPERDVVSWTALITGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRS 300
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWN-----ALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
DV + + + ++I KN + N AL+ YA+ ++A +F++L K D
Sbjct: 301 CSSLSDVDLGKQVHAQIV-KNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRD--- 356
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
+ +W+ ++ +A +G+GE+A+ F +MQ V N T++ LS C+ A L+ G
Sbjct: 357 -----LFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG 411
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
R++H ++ + ++ V + L++MY KCGC+E+ +VF+ + +D ++WN++I GY +
Sbjct: 412 RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQH 471
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G G AL FE M++ G PD V F+ VLSACSH GL+ EG++ F+ + + + I P +EH
Sbjct: 472 GQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEH 531
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
YACMVD+LGRAG E ++ M + N +W T+L +C+MH N + E A ++F L
Sbjct: 532 YACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELE 591
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
E +Y+LLSN++AA G W+D VR T+G+KK G SW+EV ++H+F S +
Sbjct: 592 PEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSH 651
Query: 672 SDLKNVCEVLEELALQMENKGCVPDNDIIL 701
++ + L++L ++ + G P+ D +L
Sbjct: 652 PKIREIHLKLQDLHQKLMSVGYTPNTDHVL 681
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 201/436 (46%), Gaps = 52/436 (11%)
Query: 34 FDHLLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + +++ K +H Q+I +G N + L ++++YA+ G A VF P
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + W +++ V+ G Y + L+++ +M G + +TF ++R+C +
Sbjct: 254 ---ERDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSD--- 306
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ VH +++ GN + L+ MYAK + D+ +F+++ ++ +W ++ +
Sbjct: 307 -VDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVA 365
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
G+A + + A++ F +M+ EG++PN T S LS
Sbjct: 366 GYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSG------------------------ 401
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
C+ +A G+ +H IK G +FV +AL+ +Y K G V+ A+ +F
Sbjct: 402 -----------CSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVF 450
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+ ++ VSWN +I Y++ G +A++ F + LD G++ P+ +++ V+ A +
Sbjct: 451 DGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAM--LDEGTV--PDEVTFIGVLSACSHM 506
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
G EE F L+K+ + TI + E+ + + + N+L+
Sbjct: 507 GLIEEGKKHFNS--LSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIW 564
Query: 451 NGLLNMYMKCGCLEEG 466
+L G +E G
Sbjct: 565 ETVLGACKMHGNIEFG 580
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 156/370 (42%), Gaps = 73/370 (19%)
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
L A ++ K I VIK G + ++L+ VY K ++ A+ + E+ +++ WN
Sbjct: 2 LRAKYILKKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQK 61
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG----------- 393
++S EAV++F + + R N ++++I A AS G
Sbjct: 62 LSSANSPYPLQEAVQLFYLMRH----TRIRLNQFIFASLISAAASLGDNHYGESIHACVC 117
Query: 394 ------------------------EEALDLFRKMQLAKVVANSVTISG------------ 417
E F+ M + + + + +SG
Sbjct: 118 KYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPR 177
Query: 418 -------------------LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
+L CA LN G+ IHG V++ +N + + N L+N+Y
Sbjct: 178 ILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYA 237
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
KCG VF +I ++D+++W ++I+G+ G G + L F +M+ GF P+ F++
Sbjct: 238 KCGSANYACKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFIS 296
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
+L +CS V+ G+++ +V+ ++ +VD+ + L++A I N ++
Sbjct: 297 ILRSCSSLSDVDLGKQVHAQIVKN-SLDGNDFVGTALVDMYAKNRFLEDAETIF-NRLIK 354
Query: 579 PNAYVWGTLL 588
+ + W ++
Sbjct: 355 RDLFAWTVIV 364
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 106/232 (45%), Gaps = 16/232 (6%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
T+ +Q+H+ I G + F+A+ ++ +YA+ G + DA VF+ ++ WN+
Sbjct: 407 TLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGL---VSRDTVSWNT 463
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
I+ +G ALK + M G + D TF V+ AC MG G+ N +
Sbjct: 464 IICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMG----LIEEGKKHFNSL 519
Query: 163 LQM-GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV-KNYISWNMMFSGFALNFDCDG 220
++ G + ++ + + G+ + +++++ N + W + ++ G
Sbjct: 520 SKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMH----G 575
Query: 221 ALELFKR--MELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
+E +R M+L LEP + LLS+ A G ++ ++ +M RG++
Sbjct: 576 NIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVK 627
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 215/699 (30%), Positives = 361/699 (51%), Gaps = 63/699 (9%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARF-GRLFDARNVFETAPFDCKS 95
L + I QL+Q H L+ ++ + + +L R ++F ++P
Sbjct: 7 LASKISNIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDSIFTSSP---SP 63
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ +++ +L+ G + + L+ L + F + +I K G G
Sbjct: 64 DASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLI---KLAGKS------G 114
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ H +VL++G + I N ++ MYAK GQ+ + LF+++ + WN M SG +
Sbjct: 115 NMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKS 174
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE--------------------- 254
+ A+ LF M N +TWTS+++ +A+ G LE
Sbjct: 175 GNETEAVVLFNMMPAR----NIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQ 230
Query: 255 ----------ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
E ++LF M + GI V +S C+ + + I + +
Sbjct: 231 SAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIV 290
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEI-EEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
FVK AL+ ++ K G++++A+N+F E+ ++N V+WN +I++Y G A E+F
Sbjct: 291 LNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDN 350
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM-QLAKVVANSVTISGLLSVC 422
+ K D V+SW+++I +A NG +++LF++M + + VTI+ +LS C
Sbjct: 351 MPKRD--------VVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSAC 402
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
AL + + V ++ I N L+ MY KCG + + H +F+ + +D++++N
Sbjct: 403 GHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFN 462
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
++ISG+ NG G+ A+ M E G +PD V ++ VL+ACSHAGL+NEG+ +F +
Sbjct: 463 TLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-- 520
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
P ++HYACMVDLLGRAG L EA ++++MPM+P+A V+G+LLN+ R+HK + E
Sbjct: 521 ---APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGEL 577
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
AS++F L + G+Y+LLSNIYA+ GRWED +VR K GLKK G SW+E K ++H
Sbjct: 578 AASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVH 637
Query: 663 MFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
F+ G+ K++ ++L EL +M+ G V D L
Sbjct: 638 KFTVGDRSHEQSKDIYKLLAELERKMKRVGFVADKSCAL 676
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 200/664 (30%), Positives = 345/664 (51%), Gaps = 59/664 (8%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS+Y++ G L + +F PF + WN + + G +A+++Y M K
Sbjct: 77 ILSVYSKLGLLSQMQQIFNLMPF---RDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAA 133
Query: 129 LG-DGFTFPLVIRACKFMGSFRFR-FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ 186
+ + TF ++ C +FR G+ ++ +L+ GF +V + + L+ MY K+G
Sbjct: 134 MNLNRITFSTMLILCS-----KFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGL 188
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
+ D+ + FD++ +N + N M +G C G +E +R+ E + ++WT +++
Sbjct: 189 IYDAKRYFDEMPERNVVMCNTMITGL---MRC-GMIEESQRLFCGLKERDSISWTIMITG 244
Query: 247 HARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY 306
+ G E +D+F MR G + VL+ C L A GK IH +VI+ +D
Sbjct: 245 LMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDN 304
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
VFV +AL+ +Y K +K A+ +F + +KN++SW A++ Y + G +EAV++F ++++
Sbjct: 305 VFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQR 364
Query: 367 LDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
NG V + T+ ++S CA A
Sbjct: 365 -----------------------NG----------------VEPDDFTLGSVISSCANLA 385
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
+L G + H + + I V N L+ +Y KCG E H +F ++ +D ++W ++++
Sbjct: 386 SLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLA 445
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
GY G + FE M+ G KPDGV F+ VLSACS AGLV +G + F+ M++E I
Sbjct: 446 GYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIM 505
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
P ++H C++DLLGRAG L+EA + + NMP P+ W TLL+SCR+H + ++ + A
Sbjct: 506 PIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADS 565
Query: 607 IFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSS 666
+ L + SY+LLS++YA+ G+W+ A++R + K ++K G SWI+ K K+H+FS+
Sbjct: 566 LIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSA 625
Query: 667 GNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHR 726
+ L + LE+L +M +G VPD +L +V+ ++I+ N S+
Sbjct: 626 DDQSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVL------HDVEESEKIKMLNHHSEKL 679
Query: 727 IVGF 730
+ F
Sbjct: 680 AIAF 683
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 199/379 (52%), Gaps = 19/379 (5%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H +L+ Q + N LI Y K+G ++ + +FD + N SWN + S ++
Sbjct: 27 LHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWNTILSVYS---- 82
Query: 218 CDGALELFKRME-LEGLEP--NFVTWTSLLSSHARCGRLEETMDLFDMMRKRG-IEVGAE 273
L L +M+ + L P + V+W +S +A G + + ++ +M K + +
Sbjct: 83 ---KLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRI 139
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ +L +C+ +G+ I+G ++K GF VFV + L+ +Y K G + A+ F E+
Sbjct: 140 TFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEM 199
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
E+N+V N +IT G+ +E+ +F L++ D ISW+ +I NG
Sbjct: 200 PERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDS--------ISWTIMITGLMQNGLE 251
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
EALD+FR+M+LA + T +L+ C AL G++IH +V+R N+ V + L
Sbjct: 252 REALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSAL 311
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY KC ++ VF+++ +K++I+W +M+ GYG NG E A+ F EM G +PD
Sbjct: 312 VDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDD 371
Query: 514 VAFVAVLSACSHAGLVNEG 532
+V+S+C++ + EG
Sbjct: 372 FTLGSVISSCANLASLEEG 390
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 168/345 (48%), Gaps = 42/345 (12%)
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
A +L +C + K +H ++K + F+ N LI Y K G++ A ++F I +
Sbjct: 9 ASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQ 68
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
N+ SWN +++ Y++ GL + ++F+ + DG +SW+ I +A+ G +
Sbjct: 69 PNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDG--------VSWNLAISGYANYGSCSD 120
Query: 396 ALDLFRKM-QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
A+ +++ M + A + N +T S +L +C++ +++GR+I+G +++ ++ V + L+
Sbjct: 121 AVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLV 180
Query: 455 NMY-------------------------------MKCGCLEEGHLVFEQIEKKDLITWNS 483
+MY M+CG +EE +F ++++D I+W
Sbjct: 181 DMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTI 240
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
MI+G NGL AL F EM AGF D F +VL+AC + EG++I ++R
Sbjct: 241 MITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTD 300
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ A +VD+ + ++ A + K MP + N W +L
Sbjct: 301 HKDNVFVGSA-LVDMYSKCRSIKSAETVFKRMP-QKNVISWTAML 343
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 163/346 (47%), Gaps = 41/346 (11%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L C ++ L KQ+H +I T + F+ + ++ +Y++ + A VF+ P
Sbjct: 273 FGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMP 332
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + W ++L NG E A+K++ +M++ GV D FT VI +C + S
Sbjct: 333 ---QKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEE 389
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G H L G + + N LI +Y K G +S +LF ++ +++ +SW + +
Sbjct: 390 ----GAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLA 445
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIE 269
G+A + + LF+RM GL+P+ VT+ +LS+ +R G +E+ + F+ M+++ GI
Sbjct: 446 GYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGI- 504
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC---VYG-------- 318
+ +V DH +I G E+ N + C V G
Sbjct: 505 -----MPIV---------DHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSC 550
Query: 319 -KHGDVKV---AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
HGD+++ A + +E +N S+ L + YA G D+ ++
Sbjct: 551 RVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQL 596
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 196/615 (31%), Positives = 333/615 (54%), Gaps = 20/615 (3%)
Query: 75 RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFT 134
++GR+ ++ FE PF + + W + + V NGL ALKL+ ++ + GV + T
Sbjct: 130 KYGRVEESMWYFERNPFQ---NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVT 186
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
F V+RAC +G F G + V++ GF+ + + N LI + +MG++ + ++F
Sbjct: 187 FTSVVRACGELGDF----GLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVF 242
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
D++ ++ +SW + + D A +F M E N ++W+++++ +++ G E
Sbjct: 243 DRMEKRDVVSWTAILDAYVETGDLREARRIFDEMP----ERNEISWSAMIARYSQSGYAE 298
Query: 255 ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
E + LF M + G + A LS A L A G IHG V K G + VF+ ++LI
Sbjct: 299 EALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLI 358
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
+Y K G + +F I EKN+V WN+++ Y+ G +E E+F + +
Sbjct: 359 DLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEETEELFELIPE-------- 410
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
N +SW +I + N + E+ L++F + ++ N T S +L CA A+L+ G +
Sbjct: 411 KNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNV 470
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
HG ++++ + +I V L +MY KCG + VFE++ +K+ I+W MI G +G
Sbjct: 471 HGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFA 530
Query: 495 ENALATFEEMIEAG-FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
+L FEEM P+ + ++VL ACSH GLV++G F+ M + + I+P+ +HY
Sbjct: 531 VESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYT 590
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
C+VDLL R+G L EA + ++ +P +P A W LL+ C+ +K+ +AE A +++ L
Sbjct: 591 CVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAEN 650
Query: 614 TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSD 673
+ Y+LLSNIYA++GRW D + +R + KGLKK G SW+EV+ ++H F S + S
Sbjct: 651 NSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQ 710
Query: 674 LKNVCEVLEELALQM 688
+ L+ L +M
Sbjct: 711 SNEIYGTLQLLRSEM 725
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 230/497 (46%), Gaps = 76/497 (15%)
Query: 155 GQIVHNHVLQMGFQGNVHIV-------------------------------NELIGMYAK 183
G ++H H+++ GF +I N +I Y +
Sbjct: 40 GNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEFDGSDLVVSNCMISAYVQ 99
Query: 184 MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
G + + LFD++ +N +SW+ + SG + ++ F+R + N V+WT+
Sbjct: 100 WGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQ----NVVSWTAA 155
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
+S R G E + LF + + G+ V+ C +L +G I G V+K GF
Sbjct: 156 ISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGF 215
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
E Y+ V N+LI + + G++ +A+ +F +E++++VSW A++ +Y E G EA +F +
Sbjct: 216 EHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFDE 275
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
M N ISWSA+I ++ +G EEAL LF KM N + LS A
Sbjct: 276 --------MPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCFACTLSALA 327
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
AL+ G IHGHV ++ ++K++ + + L+++Y KCG ++G LVF+ I +K+++ WNS
Sbjct: 328 SLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEKNVVCWNS 387
Query: 484 MISGYGMNGLG-------------------------------ENALATFEEMIEAGFKPD 512
M+ GY +NG E L F ++ +G P+
Sbjct: 388 MVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPN 447
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
F +VL AC+ +++G + +++ I+ + + D+ + G + + +
Sbjct: 448 KSTFSSVLCACASIASLDKGMNVHGKIIK-LGIQYDIFVGTALTDMYAKCGDIGSSKQVF 506
Query: 573 KNMPMEPNAYVWGTLLN 589
+ MP E N W ++
Sbjct: 507 ERMP-EKNEISWTVMIQ 522
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 155/311 (49%), Gaps = 26/311 (8%)
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V N +I Y + G++ A+ LF E+ E+N VSW+ALI+ + G +E++ F +
Sbjct: 89 VSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFER----- 143
Query: 369 GGSMERP--NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
P NV+SW+A I F NG EAL LF ++ + V N VT + ++ C E
Sbjct: 144 -----NPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELG 198
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
+G I G VV+ + V N L+ + ++ G ++ VF+++EK+D+++W +++
Sbjct: 199 DFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILD 258
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
Y G A F+EM E + +++ A+++ S +G E ++F MV+E +
Sbjct: 259 AYVETGDLREARRIFDEMPER----NEISWSAMIARYSQSGYAEEALKLFSKMVQE-GFK 313
Query: 547 PQMEHYACMVDLLGRAGLLQEASDI---VKNMPMEPNAYVWGTLLN-SCRMHKNTDVAEA 602
P + +AC + L L +I V + ++ + ++ +L++ C+ K D
Sbjct: 314 PNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDD---- 369
Query: 603 MASQIFGLITE 613
+F LI E
Sbjct: 370 -GRLVFDLILE 379
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 16/236 (6%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSM-NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
++S C SA + G + ++ M +N + + L++ MK G +EE FE+ +
Sbjct: 88 VVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQ 147
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
++++W + ISG+ NGL AL F ++E+G +P+ V F +V+ AC G G I
Sbjct: 148 NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSIL 207
Query: 537 DMMVREFRIEPQMEHYA----CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
++V+ EHY ++ L R G + A + M + + W +L++
Sbjct: 208 GLVVK-----AGFEHYLSVSNSLITLSLRMGEIDLARRVFDRME-KRDVVSWTAILDA-- 259
Query: 593 MHKNTDVAEAMASQIFGLITETTG-SYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
+ D+ E A +IF + E S+ + Y+ SG E+A K+ +G K
Sbjct: 260 YVETGDLRE--ARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFK 313
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
A + T LL + + G +H H+++ + + LL +Y+ C E +
Sbjct: 19 AYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQI 78
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
++ + DL+ N MIS Y G A F+EM E + V++ A++S G V
Sbjct: 79 VKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPER----NEVSWSALISGLMKYGRV 134
Query: 530 NEGRRIFD 537
E F+
Sbjct: 135 EESMWYFE 142
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 349 bits (895), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 191/549 (34%), Positives = 311/549 (56%), Gaps = 47/549 (8%)
Query: 154 FGQI--VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
F QI VH H+++ G +++ +LI M K+ S+ L +V NY
Sbjct: 55 FSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQV-NY--------- 104
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
PN WT+++ +A G L E+ + + MR+ G+
Sbjct: 105 -----------------------PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPV 141
Query: 272 AEAIAVVLSVCADLAADHMGKVIHG-FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+ + + C +GK +H ++ GGF ++V N++I +Y K G + A+ +F
Sbjct: 142 SFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVF 201
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
E+ E+++VSW LI +YA+ G + A +F L D +++W+A++ +A N
Sbjct: 202 DEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKD--------MVAWTAMVTGYAQN 253
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK--NIL 448
GR +EAL+ F+KMQ + + VT++G++S CA+ A+ I R N++
Sbjct: 254 GRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVV 313
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
V + L++MY KCG +E + VFE ++++++ +++SMI GY M+G +AL F +M++
Sbjct: 314 VGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTE 373
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+P+ V F+ +LSACSHAGLV +GR++F M + F + P +HYACMVDLLGRAG L+EA
Sbjct: 374 IRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEA 433
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
D+VK MPMEPN VWG LL +CR+H N D+A+ A+++F L G+Y+LLSNIYA++
Sbjct: 434 LDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASA 493
Query: 629 GRWEDAAKVRISAKTKGLKKVAGQSWIEVKR-KIHMFSSGNSLQSDLKNVCEVLEELALQ 687
GRWE+ +K+R + KG KK G SW E K +IH F +G++ + + L++L +
Sbjct: 494 GRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIRQALKQLIER 553
Query: 688 MENKGCVPD 696
+ + G P+
Sbjct: 554 LRSHGYKPN 562
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 213/493 (43%), Gaps = 71/493 (14%)
Query: 20 PFSIITYNNSLLDC-FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGR 78
PF + + LL+ +L C Q+KQVH +I G + +++ +++ + +
Sbjct: 30 PFPQLQHQRKLLEWRLMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDV 89
Query: 79 LFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLV 138
+ + + + LW +++R GL + Y +MR+ GV FTF +
Sbjct: 90 PMGSYPLLVFGQVN-YPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSAL 148
Query: 139 IRACK----------------FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIV-------- 174
+AC +G F G + + ++ GF G V
Sbjct: 149 FKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERD 208
Query: 175 ----NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
ELI YAK G M + LFD + +K+ ++W M +G+A N ALE F++M+
Sbjct: 209 VVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQD 268
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL----- 285
G+E + VT ++S+ A+ G ++ + D+ + G G VV S D+
Sbjct: 269 VGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGF--GPSGNVVVGSALIDMYSKCG 326
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI----VSW 341
+ D KV V+K E VF +++I Y HG A LF ++ + I V++
Sbjct: 327 SPDEAYKVFE--VMK---ERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTF 381
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
++++ + AGL ++ ++F+++EK G + P+ ++ ++ G EEALDL +
Sbjct: 382 IGILSACSHAGLVEQGRQLFAKMEKFFGVA---PSPDHYACMVDLLGRAGCLEEALDLVK 438
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH--VVRVSMNKNI-LVQNG------ 452
M + N LL C IHG+ + +++ N+ L NG
Sbjct: 439 TMPME---PNGGVWGALLGAC----------RIHGNPDIAQIAANELFKLEPNGIGNYIL 485
Query: 453 LLNMYMKCGCLEE 465
L N+Y G EE
Sbjct: 486 LSNIYASAGRWEE 498
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 123/313 (39%), Gaps = 34/313 (10%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH--LVFEQIEK 475
L+S+ + + +++H H++R +++ V L+ M K + LVF Q+
Sbjct: 45 LMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNY 104
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
+ W +MI GY + GL + + M G P F A+ AC A ++ G+++
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
+ + M+DL + G L A + M E + W L+ + +
Sbjct: 165 HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMS-ERDVVSWTELIVAYAKYG 223
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK------- 648
+ + A + L + ++ + YA +GR ++A + + G++
Sbjct: 224 DMESASGLFDD---LPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAG 280
Query: 649 ----------VAGQSWI-EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
V +WI ++ + SGN V+ + M +K PD
Sbjct: 281 VISACAQLGAVKHANWIRDIAERSGFGPSGNV----------VVGSALIDMYSKCGSPDE 330
Query: 698 DIILWEMMGKKNV 710
++E+M ++NV
Sbjct: 331 AYKVFEVMKERNV 343
>gi|225432410|ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Vitis vinifera]
Length = 623
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 199/621 (32%), Positives = 330/621 (53%), Gaps = 25/621 (4%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
A+ GR+ AR +F+ P ++ WN++L GL++ AL L+ MR D F
Sbjct: 16 AKLGRITSARRLFDEMP---HKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDRF 72
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
TF + AC +G R G +H V+ G Q ++ + N LI MY K + + ++
Sbjct: 73 TFTATLSACAGLGELRR----GMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRV 128
Query: 194 FDKVRVKNYISW-NMMFSGFALNFDCDGALELFKRMELEGLEPNF-VTWTSLLSSHARCG 251
F+++ + N +SW +++F+ + G ++ R+ +G+ + W ++S + +CG
Sbjct: 129 FEEMSIMNEVSWCSLLFA-----YTSSGLFDV-ARVVFDGMPKKVEIAWNIMISGYGQCG 182
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
+E + LF MR+ ++ + +++ +L G ++HGF+IK G+ V V N
Sbjct: 183 DVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSN 242
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
+++ Y K G +F I VSWNA+I ++ + G EA VF QL
Sbjct: 243 SILSFYSKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVF-QLAP----- 296
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
NV+SW+++I +A NG GE+AL F KM + + T +L C+ A L G
Sbjct: 297 --EKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHG 354
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
+ IHG ++ + + V NGL+NMY KCG ++ + F++I KDL++WN+M+ G GM+
Sbjct: 355 KMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMH 414
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G AL +EEM+ +G KPD V F+ +L CSH+GL+ +G+ +F+ MV + + + EH
Sbjct: 415 GHATQALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEH 474
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNA--YVWGTLLNSCRMHKNTDVAEAMASQIFG 609
CMVDLLGR G L +A ++V A + LL +C H + + +
Sbjct: 475 VVCMVDLLGRGGYLAQARELVDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKV 534
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
+ SY+LLSN+Y SG+W++A VR + G+KK+ G SWIEV+ K+ +F +GN
Sbjct: 535 FEPQKEMSYVLLSNLYCVSGQWKEAEMVRKTMTDHGVKKMPGCSWIEVRNKVTVFVAGNH 594
Query: 670 LQSDLKNVCEVLEELALQMEN 690
++ +C++L L +M N
Sbjct: 595 SHPYMEELCKILNFLKFEMRN 615
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 32/231 (13%)
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
++F + I K G + A+ LF E+ K+ V+WNA++ SY++ GL +A+ +F
Sbjct: 2 HSHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHH 61
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
+ + RP+ +++A + A A G +L R M+ + V +SG S
Sbjct: 62 MRIAN----SRPDRFTFTATLSACAGLG------ELRRGMK----IHAQVVVSGCQS--- 104
Query: 424 ESAALNIGR---EIHGHVVRVSMNKNILVQNGLLN---------MYMKCGCLEEGHLVFE 471
+L +G +++G + + + + + ++N Y G + +VF+
Sbjct: 105 ---SLPVGNSLIDMYGKCLSATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFD 161
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
+ KK I WN MISGYG G E L F++M E +PD F A+++A
Sbjct: 162 GMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSALVNA 212
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 197/659 (29%), Positives = 352/659 (53%), Gaps = 33/659 (5%)
Query: 66 AARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
A +LS Y+ G + A +F P + + + +N+++ + AL+L+V+M++
Sbjct: 65 ATTMLSAYSAAGNIKLAHQLFNATPMSIRDT-VSYNAMITAFSHSHDGHAALQLFVQMKR 123
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
LG + D FTF V+ A + + Q +H V + G ++N L+ Y
Sbjct: 124 LGFVPDPFTFSSVLGALSLIADEE---THCQQLHCEVFKWGALSVPSVLNALMSCYVSCA 180
Query: 186 Q---------MSDSFKLFDKVRV--KNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
M+ + KLFD+ ++ +W + +G+ N D A EL LEG+
Sbjct: 181 SSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAAREL-----LEGMT 235
Query: 235 PNF-VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
+ V W +++S + G EE DL M GI++ V+S ++ ++G+
Sbjct: 236 DHIAVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQ 295
Query: 294 IHGFVIKGGFED----YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+H +V++ + + V NALI +Y + G + A+ +F ++ K++VSWNA+++
Sbjct: 296 VHAYVLRTVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCV 355
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
A +EA +F + M ++++W+ +I A NG GEE L LF +M+L +
Sbjct: 356 NARRIEEANSIFRE--------MPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLE 407
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
+G ++ C+ +L+ G+++H ++++ + ++ V N L+ MY +CG +E V
Sbjct: 408 PCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTV 467
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F + D ++WN+MI+ +G G A+ +E+M++ PD + F+ +LSACSHAGLV
Sbjct: 468 FLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLV 527
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
EGR FD M + I P+ +HY+ ++DLL RAG+ EA ++ ++MP EP A +W LL
Sbjct: 528 KEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLA 587
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
C +H N ++ A ++ L+ + G+Y+ LSN+YAA G+W++ A+VR + +G+KK
Sbjct: 588 GCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKE 647
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKK 708
G SWIEV+ +H+F +++ ++ V LE+L +M G VPD +L +M ++
Sbjct: 648 PGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQ 706
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 212/489 (43%), Gaps = 59/489 (12%)
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
SF + VH H+L GF+ I+N LI Y K + + LFDK+ + ++ M S +
Sbjct: 13 SFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAATTMLSAY 72
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
+ + A +LF + + V++ +++++ + + LF M++ G
Sbjct: 73 SAAGNIKLAHQLFNATPMSIRDT--VSYNAMITAFSHSHDGHAALQLFVQMKRLGFVPDP 130
Query: 273 EAIAVVLSVCADLAADHMG-KVIHGFVIKGGFEDYVFVKNALICVYGKHGD--------- 322
+ VL + +A + + +H V K G V NAL+ Y
Sbjct: 131 FTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSCVL 190
Query: 323 VKVAQNLFSEIEE--KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
+ A+ LF E ++ +W +I Y ++ + E L+G M ++W
Sbjct: 191 MAAARKLFDEAPPGRRDEPAWTTIIAGYVRND------DLVAARELLEG--MTDHIAVAW 242
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+A+I + G EEA DL R+M + + T + ++S + + NIGR++H +V+R
Sbjct: 243 NAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLR 302
Query: 441 VSMNKN----ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS------------- 483
+ + + V N L+ +Y +CG L E VF+++ KDL++WN+
Sbjct: 303 TVVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEE 362
Query: 484 ------------------MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
MISG NG GE L F +M G +P A+ +++CS
Sbjct: 363 ANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSV 422
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
G ++ G+++ ++ + + + ++ + R GL++ A + MP ++ W
Sbjct: 423 LGSLDNGQQLHSQII-QLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYV-DSVSWN 480
Query: 586 TLLNSCRMH 594
++ + H
Sbjct: 481 AMIAALAQH 489
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 156/359 (43%), Gaps = 61/359 (16%)
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
A L+ + +H ++ GF+ + + N LI Y K ++ A+ LF +I + +IV+
Sbjct: 7 AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
++++Y+ AG A ++F + M + +S++A+I AF+ + G AL LF +
Sbjct: 67 TMLSAYSAAGNIKLAHQLF------NATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQ 120
Query: 403 MQLAKVVANSVTIS---GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
M+ V + T S G LS+ A+ +++H V + V N L++ Y+
Sbjct: 121 MKRLGFVPDPFTFSSVLGALSLIADEE--THCQQLHCEVFKWGALSVPSVLNALMSCYVS 178
Query: 460 CGC---------LEEGHLVFEQ------------------IEKKDL-------------- 478
C + +F++ + DL
Sbjct: 179 CASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHI 238
Query: 479 -ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+ WN+MISGY G E A M G + D + +V+SA S+AGL N GR++
Sbjct: 239 AVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHA 298
Query: 538 MMVREFRIEPQMEHYA-----CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
++R ++P H+ ++ L R G L EA + MP++ + W +L+ C
Sbjct: 299 YVLRTV-VQPS-GHFVLSVNNALITLYTRCGKLVEARRVFDKMPVK-DLVSWNAILSGC 354
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 118/255 (46%), Gaps = 16/255 (6%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+Q+H+Q+I G ++S + ++++Y+R G + A VF T P+ S+ WN+++
Sbjct: 430 QQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPY---VDSVSWNAMIAAL 486
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG---SFRFRFSFGQIVHNHVLQ 164
+G A++LY KM K +L D TF ++ AC G R F ++ +
Sbjct: 487 AQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCY----- 541
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMMFSGFALNFDCDGALE 223
G + LI + + G S++ + + + + W + +G ++ + + ++
Sbjct: 542 -GITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQ 600
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI--EVGAEAIAVVLSV 281
R+ LE + T+ SL + +A G+ +E + +MR+RG+ E G I V V
Sbjct: 601 AADRL-LELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMV 659
Query: 282 CADLAADHMGKVIHG 296
L D + +H
Sbjct: 660 HVFLVDDAVHPEVHA 674
>gi|326522488|dbj|BAK07706.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 799
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 205/627 (32%), Positives = 326/627 (51%), Gaps = 35/627 (5%)
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
GR+ +A ++E P S + + + V N L+ NAL ++ KM GV +G TF
Sbjct: 197 GRVAEAVELYEQCP---SGSVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFV 253
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
+I+AC G F S IV + + F+ ++ + N LI +Y +MG + + K+FD+
Sbjct: 254 CMIKACVGAGEFGLAMS---IVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDE 310
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
+ VK+ +SW + ++ + D DGA + M E N V+W +L++ H + G E
Sbjct: 311 MDVKDVVSWTALLDVYSESGDLDGARRVLDAMP----ERNEVSWGTLIARHEQRGNAAEA 366
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
+ L+ M G + VLS CA L G IH +K G VFV ++LI +
Sbjct: 367 VKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDM 426
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
Y K + AQ +F + EKNIV WN+L + Y+ G EA+ +F + M N
Sbjct: 427 YCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKK--------MPARN 478
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
+ SW+ +I +A N + +AL F M + V +T S +L CA +L G+ H
Sbjct: 479 LASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHA 538
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
+++ M ++I + L +MY K G L+ +F Q+ +++ +TW +MI G NGL E
Sbjct: 539 KTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGLAEE 598
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
++ FE+M+ G P+ F+A+L ACSH GLV + F+ M + + I P+ +HY CMV
Sbjct: 599 SILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKM-QAWGISPKEKHYTCMV 657
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
D+L RAG L EA ++ P + A W LL++C +KN ++ E A ++ L + T
Sbjct: 658 DVLARAGRLIEAEALLMKTPSKSEANSWAALLSACNTYKNEEIGERAAKRLHELGKDNTA 717
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKN 676
Y+LLSN+YA+ GRW+DAA++R+ K LKK G SW++V+ + H F S +
Sbjct: 718 GYVLLSNMYASCGRWKDAARIRVLMKGTTLKKDGGCSWVQVRGQYHAFFSWEAKHPLSME 777
Query: 677 VCEVLEELALQMENKGCVPDNDIILWE 703
+ E+L D++LWE
Sbjct: 778 INEIL----------------DLLLWE 788
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 116/482 (24%), Positives = 206/482 (42%), Gaps = 90/482 (18%)
Query: 152 FSFGQIVHNHVLQMG--------FQG----NVHIVNELIGMYAKMGQMSDSFKLFDKVRV 199
F++ +VH HV + G F G +V ++ K G+++++ +L+++
Sbjct: 153 FTYDFMVHEHV-KAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQCPS 211
Query: 200 KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDL 259
+ + SGF N AL +F++M G+ PN +T+ ++ + C
Sbjct: 212 GSVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKA---C--------- 259
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG-FEDYVFVKNALICVYG 318
VGA + +S+ G IK FE + V+N+LI +Y
Sbjct: 260 ----------VGAGEFGLAMSIV-------------GSAIKSNFFESSIEVQNSLITLYL 296
Query: 319 KHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
+ GD A+ +F E++ K++VSW AL+ Y+E+G D A V +M N +
Sbjct: 297 RMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLD--------AMPERNEV 348
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHV 438
SW +I G EA+ L+ +M N S +LS CA L G IH
Sbjct: 349 SWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARS 408
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN------- 491
+++ + N+ V + L++MY KC + +F+ + +K+++ WNS+ SGY N
Sbjct: 409 LKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAM 468
Query: 492 -------------------GLGEN-----ALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
G +N AL +F M+ +G P + F +VL AC++
Sbjct: 469 YLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLC 528
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
+ G+ ++ +E + + D+ ++G LQ + + MP E N W +
Sbjct: 529 SLVTGKMAHAKTIK-LGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMP-ERNDVTWTAM 586
Query: 588 LN 589
+
Sbjct: 587 IQ 588
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 172/393 (43%), Gaps = 48/393 (12%)
Query: 31 LDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
+ CF +L C T+ L+ ++H + + G++ + F+++ ++ +Y + + DA+ +F+
Sbjct: 382 ISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFD 441
Query: 88 TAP---------------FDCKSSSLL-------------WNSILRVNVSNGLYENALKL 119
T P ++ K + WN+I+ N + +AL+
Sbjct: 442 TLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRS 501
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
+ M G + TF V+ AC + S G++ H +++G + ++ I L
Sbjct: 502 FNAMLASGQVPGEITFSSVLLACANLCS----LVTGKMAHAKTIKLGMEESIFIGTALSD 557
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MYAK G + S ++F ++ +N ++W M G A N + ++ LF+ M G+ PN T
Sbjct: 558 MYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGLAEESILLFEDMMATGMTPNEHT 617
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI--HGF 297
+ +LL + + G +E+ + F+ M+ GI + ++ V A G++I
Sbjct: 618 FLALLFACSHGGLVEQAIHYFEKMQAWGISPKEKHYTCMVDVLA-----RAGRLIEAEAL 672
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKV---AQNLFSEIEEKNIVSWNALITSYAEAGLC 354
++K + AL+ + + ++ A E+ + N + L YA G
Sbjct: 673 LMKTPSKSEANSWAALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRW 732
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+A + ++ G ++++ SW V G +
Sbjct: 733 KDAARIRVLMK---GTTLKKDGGCSWVQVRGQY 762
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
F + ++ + K GD+ A+ LF + E+++VS+ ++ + + G EAVE++ E+
Sbjct: 153 FTYDFMVHEHVKAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELY---EQC 209
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
GS V ++A I F N AL +FRKM V N +T ++ C +
Sbjct: 210 PSGS-----VAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGE 264
Query: 428 LNIGREIHGHVVRVS-MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
+ I G ++ + +I VQN L+ +Y++ G VF++++ KD+++W +++
Sbjct: 265 FGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLD 324
Query: 487 GYG-------------------------------MNGLGENALATFEEMIEAGFKPDGVA 515
Y G A+ + +M+ G +P+
Sbjct: 325 VYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISC 384
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY--ACMVDLLGRAGLLQEASDIVK 573
F +VLSAC+ + G RI R ++ + + ++D+ + ++A I
Sbjct: 385 FSSVLSACATLEDLRGGARIH---ARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFD 441
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+P E N W +L + N + EAM
Sbjct: 442 TLP-EKNIVCWNSLASG--YSYNGKMVEAM 468
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 207/659 (31%), Positives = 335/659 (50%), Gaps = 82/659 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQVH Q I G + ++ +Y + + D VF+ + + W S+L
Sbjct: 112 KQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRV---KNVVSWTSLLAGY 168
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
NGL E ALKL+ +M+ G+ + FTF V+ G+ G VH V++ G
Sbjct: 169 RQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEK----GVQVHTMVIKSGL 224
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ + N ++ MY+K +SD+ +FD + +N +S
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVS----------------------- 261
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
W S+++ G E +LF MR G+++ A V+ +CA++
Sbjct: 262 ------------WNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKE 309
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
K +H VIK G + + +K AL+ Y K ++
Sbjct: 310 MSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEI------------------------ 345
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
D+A ++F + + NV+SW+A+I + NGR + A++LF +M+ +
Sbjct: 346 -------DDAFKLFCMMHGVQ-------NVVSWTAIISGYVQNGRTDRAMNLFCQMRREE 391
Query: 408 -VVANSVTISGLLSVCA-ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
V N T S +L+ CA +A++ G++ H ++ + + V + L+ MY K G +E
Sbjct: 392 GVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIES 451
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
+ VF++ +DL++WNSMISGY +G G+ +L FEEM + DG+ F+ V+SAC+H
Sbjct: 452 ANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTH 511
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
AGLVNEG+R FD+MV+++ I P MEHY+CMVDL RAG+L++A D++ MP A +W
Sbjct: 512 AGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWR 571
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
TLL +CR+H N + E A ++ L + + +Y+LLSNIYA +G W++ AKVR K
Sbjct: 572 TLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKK 631
Query: 646 LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+KK AG SWIEVK K F +G+ + LEEL++++++ G PD +L ++
Sbjct: 632 VKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDV 690
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 138/303 (45%), Gaps = 43/303 (14%)
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC 282
+LF +GL N LL +R + +E ++LF +R+ G +++ VL VC
Sbjct: 47 QLFDETPQQGLSRN----NHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVC 102
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
L +GK +H IK GF + V V +L+ +Y K V+ + +F E+ KN
Sbjct: 103 GCLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKN----- 157
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
V+SW++++ + NG E+AL LF +
Sbjct: 158 ----------------------------------VVSWTSLLAGYRQNGLNEQALKLFSQ 183
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
MQL + N T + +L A A+ G ++H V++ ++ I V N ++NMY K
Sbjct: 184 MQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLM 243
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
+ + VF+ +E ++ ++WNSMI+G+ NGL A F M G K F V+
Sbjct: 244 VSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKL 303
Query: 523 CSH 525
C++
Sbjct: 304 CAN 306
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 112/202 (55%), Gaps = 2/202 (0%)
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
F+ N + +EAL+LF ++ + + ++S +L VC +G+++H ++ ++
Sbjct: 67 FSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVED 126
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+ V L++MYMK +E+G VF+++ K++++W S+++GY NGL E AL F +M
Sbjct: 127 VSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQL 186
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
G KP+ F AVL + G V +G ++ M+++ ++ + MV++ ++ ++
Sbjct: 187 EGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKS-GLDSTIFVGNSMVNMYSKSLMVS 245
Query: 567 EASDIVKNMPMEPNAYVWGTLL 588
+A + +M NA W +++
Sbjct: 246 DAKAVFDSME-NRNAVSWNSMI 266
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 120/236 (50%), Gaps = 9/236 (3%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +++ C I ++ KQ+H Q+I G++ + ++ Y++ + DA +F
Sbjct: 297 FATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF--CM 354
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL-GVLGDGFTFPLVIRACKFMGSFR 149
+ + W +I+ V NG + A+ L+ +MR+ GV + FTF V+ AC +
Sbjct: 355 MHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNAC---AAPT 411
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+ H+ ++ GF + + + L+ MYAK G + + ++F + ++ +SWN M
Sbjct: 412 ASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMI 471
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
SG+A + +L++F+ M + LE + +T+ ++S+ G + E FD+M K
Sbjct: 472 SGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVK 527
>gi|449451309|ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
gi|449526377|ref|XP_004170190.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 577
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 190/554 (34%), Positives = 312/554 (56%), Gaps = 18/554 (3%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G +H+H+++ ++ + N LI MY+K M ++ K FD + ++N SWN + + ++
Sbjct: 30 GMSLHSHLIKTALSFDLFLANRLIDMYSKCNSMENAQKAFDDLPIRNIHSWNTILASYSR 89
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
A ++F M PN V++ +L+SS G E+M++F M++ + +
Sbjct: 90 AGFFSQARKVFDEMP----HPNIVSYNTLISSFTHHGLYVESMNIFRQMQQDFDLLALDE 145
Query: 275 IAVV--LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
I +V CA L A + +HG I G E + V NA++ YGK GD + ++FS
Sbjct: 146 ITLVSIAGTCACLGALEFLRQVHGAAIVIGLEFNMIVCNAIVDAYGKCGDPDASYSIFSR 205
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
++E+++V+W +++ +Y + D+A VFS M NV +W+A+I A N
Sbjct: 206 MKERDVVTWTSMVVAYNQTSRLDDAFRVFS--------CMPVKNVHTWTALINALVKNKY 257
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN---KNILV 449
EALDLF++M K N+ T G+LS CA+ A + G+EIHG ++R S N+ V
Sbjct: 258 SNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLIIRRSSELNFPNVYV 317
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
N L+++Y K G ++ ++F I +KD+++WNS+I+G+ NGLG AL F +M E G
Sbjct: 318 CNALIDLYSKSGDVKSARMLFNLILEKDVVSWNSLITGFAQNGLGREALLAFRKMTEVGI 377
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
+P+ V F+AVLSACSH GL +EG I ++M + + IEP +EHYA M+D+ GR L EA
Sbjct: 378 RPNKVTFLAVLSACSHTGLSSEGLCILELMEKFYDIEPSLEHYAVMIDMFGRENRLAEAL 437
Query: 570 DIVKNMPM-EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
D++ P + +WG +L +CR+H+N D+A A +F + + G Y++LSN++AA+
Sbjct: 438 DLISRAPNGSKHVGIWGAVLGACRIHENLDLAIRAAETLFEMEPDNAGRYVMLSNVFAAA 497
Query: 629 GRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
RW DA VR + +G KK S IE++ H F + ++ S + + E++ L M
Sbjct: 498 SRWMDAHNVRKLMEERGFKKEVAYSCIEIRNIRHKFVARDNSHSQMGEIYELMFILLEHM 557
Query: 689 ENKGCVPDNDIILW 702
G + +D I +
Sbjct: 558 NIIGYMALDDGIYF 571
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 197/419 (47%), Gaps = 57/419 (13%)
Query: 28 NSLLDCFDH---LLQQCKTIHQLK---QVHNQLIVTGANASAFLAAR------------- 68
+ L FDH L +C L+ +H+ LI T + FLA R
Sbjct: 5 SDLFPSFDHCARLFSKCIQHKHLRVGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSMEN 64
Query: 69 ------------------VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSN 110
+L+ Y+R G AR VF+ P + + +N+++ +
Sbjct: 65 AQKAFDDLPIRNIHSWNTILASYSRAGFFSQARKVFDEMP---HPNIVSYNTLISSFTHH 121
Query: 111 GLYENALKLYVKMRK-LGVLG-DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
GLY ++ ++ +M++ +L D T + C +G+ F + VH + +G +
Sbjct: 122 GLYVESMNIFRQMQQDFDLLALDEITLVSIAGTCACLGALEFL----RQVHGAAIVIGLE 177
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
N+ + N ++ Y K G S+ +F +++ ++ ++W M + D A +F M
Sbjct: 178 FNMIVCNAIVDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQTSRLDDAFRVFSCM 237
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
++ N TWT+L+++ + E +DLF M + A VLS CADLA
Sbjct: 238 PVK----NVHTWTALINALVKNKYSNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALI 293
Query: 289 HMGKVIHGFVIKGGFE---DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
GK IHG +I+ E V+V NALI +Y K GDVK A+ LF+ I EK++VSWN+LI
Sbjct: 294 AKGKEIHGLIIRRSSELNFPNVYVCNALIDLYSKSGDVKSARMLFNLILEKDVVSWNSLI 353
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
T +A+ GL EA+ F ++ ++ RPN +++ AV+ A + G E L + M+
Sbjct: 354 TGFAQNGLGREALLAFRKMTEVG----IRPNKVTFLAVLSACSHTGLSSEGLCILELME 408
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 174/349 (49%), Gaps = 44/349 (12%)
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
A + S C +G +H +IK +F+ N LI +Y K ++ AQ F ++
Sbjct: 15 ARLFSKCIQHKHLRVGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSMENAQKAFDDLPI 74
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
+NI SWN ++ SY+ AG +A +VF + M PN++S++ +I +F +G E
Sbjct: 75 RNIHSWNTILASYSRAGFFSQARKVFDE--------MPHPNIVSYNTLISSFTHHGLYVE 126
Query: 396 ALDLFRKMQ--LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
++++FR+MQ + + +T+ + CA AL R++HG + + + N++V N +
Sbjct: 127 SMNIFRQMQQDFDLLALDEITLVSIAGTCACLGALEFLRQVHGAAIVIGLEFNMIVCNAI 186
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG------------------------ 489
++ Y KCG + + +F +++++D++TW SM+ Y
Sbjct: 187 VDAYGKCGDPDASYSIFSRMKERDVVTWTSMVVAYNQTSRLDDAFRVFSCMPVKNVHTWT 246
Query: 490 --MNGLGEN-----ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
+N L +N AL F++M+E P+ FV VLSAC+ L+ +G+ I +++R
Sbjct: 247 ALINALVKNKYSNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLIIRR 306
Query: 543 FRIEPQMEHYAC--MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
Y C ++DL ++G ++ A ++ N+ +E + W +L+
Sbjct: 307 SSELNFPNVYVCNALIDLYSKSGDVKSAR-MLFNLILEKDVVSWNSLIT 354
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 11/213 (5%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y + RL DA VF P + W +++ V N AL L+ +M + +
Sbjct: 221 YNQTSRLDDAFRVFSCMPVKNVHT---WTALINALVKNKYSNEALDLFQQMLEEKTSPNA 277
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ---GNVHIVNELIGMYAKMGQMSD 189
FTF V+ AC + + G+ +H +++ + NV++ N LI +Y+K G +
Sbjct: 278 FTFVGVLSACADLA----LIAKGKEIHGLIIRRSSELNFPNVYVCNALIDLYSKSGDVKS 333
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
+ LF+ + K+ +SWN + +GFA N AL F++M G+ PN VT+ ++LS+ +
Sbjct: 334 ARMLFNLILEKDVVSWNSLITGFAQNGLGREALLAFRKMTEVGIRPNKVTFLAVLSACSH 393
Query: 250 CGRLEETMDLFDMMRK-RGIEVGAEAIAVVLSV 281
G E + + ++M K IE E AV++ +
Sbjct: 394 TGLSSEGLCILELMEKFYDIEPSLEHYAVMIDM 426
Score = 39.3 bits (90), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 24/142 (16%)
Query: 26 YNNSLLDCFDHLLQQCKT------------------IHQLKQVHNQLIVTGAN---ASAF 64
Y+N LD F +L++ + I + K++H +I + + +
Sbjct: 257 YSNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLIIRRSSELNFPNVY 316
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
+ ++ +Y++ G + AR +F + + WNS++ NGL AL + KM
Sbjct: 317 VCNALIDLYSKSGDVKSARMLFNLI---LEKDVVSWNSLITGFAQNGLGREALLAFRKMT 373
Query: 125 KLGVLGDGFTFPLVIRACKFMG 146
++G+ + TF V+ AC G
Sbjct: 374 EVGIRPNKVTFLAVLSACSHTG 395
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 177/467 (37%), Positives = 277/467 (59%), Gaps = 11/467 (2%)
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM--GKVIH 295
V WTS L+ + R G+L E F MR G+E +LS CAD ++ +H
Sbjct: 58 VLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLH 117
Query: 296 GFVIKGGFED-YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
G+ K G + +V V ALI +Y K + A+ +F + KN VSWN ++ + G
Sbjct: 118 GYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEI 177
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
+ A+++F ++ D ISW+A+I +G E+AL+ F +MQ + V A+ V+
Sbjct: 178 ELAIQLFDEMPTRDA--------ISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVS 229
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
I +L+ CA+ AL +G +H V+ NI + N L++MY +CGC+E VF ++
Sbjct: 230 IIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMA 289
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
K+ L++WNS+I G+ +NG + +L F M + GFKPDGV++ L+ACSHAGLVN+G
Sbjct: 290 KRTLVSWNSIIVGFAVNGFADESLEFFXAMQKEGFKPDGVSYTGALTACSHAGLVNKGLE 349
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+FD M +I P++EHY C+VDL GRAG L++A ++++ MPM+PN V G+LL +CR H
Sbjct: 350 LFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTH 409
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
+ ++AE + +F L E Y+LLSNIYAA G+W+ A VR + K +G++K G S
Sbjct: 410 GDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSS 469
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+E+ K+H F +G++ +D N+ +L+ L +++ G VP +D IL
Sbjct: 470 VEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTIL 516
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 183/377 (48%), Gaps = 42/377 (11%)
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
+LW S L NG A + +MR GV + TF ++ AC S F F+
Sbjct: 58 VLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFA--SS 115
Query: 158 VHNHVLQMGFQ-GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H + + G G+V + LI MY+K Q+ + K+F + VKN +SWN M +GF N
Sbjct: 116 LHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNG 175
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
+ + A++LF M + ++WT+L++ + G E+ ++ F M++ G+ +I
Sbjct: 176 EIELAIQLFDEMPTR----DAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSII 231
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
VL+ CADL A +G +H FV+ F+D + + N+LI +Y + G ++ A+ +F ++ ++
Sbjct: 232 AVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKR 291
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLE----KLDGGSME------------------- 373
+VSWN++I +A G DE++E F ++ K DG S
Sbjct: 292 TLVSWNSIIVGFAVNGFADESLEFFXAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELF 351
Query: 374 ---------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
P + + ++ + GR E+AL++ +M + N V + LL+ C
Sbjct: 352 DNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKP---NEVVLGSLLAACRT 408
Query: 425 SAALNIGREIHGHVVRV 441
+N+ + H+ ++
Sbjct: 409 HGDVNLAERLMKHLFKL 425
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 109/234 (46%), Gaps = 37/234 (15%)
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE--SAALNIGREI 434
++ W++ + + NG+ EA F +M+LA V N +T LLS CA+ S + +
Sbjct: 57 IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
Query: 435 HGHVVRVSMNK-NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN-- 491
HG+ + ++ +++V L++MY KC L VF + K+ ++WN+M++G+ N
Sbjct: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGE 176
Query: 492 -----------------------------GLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
G E AL F +M +G D V+ +AVL+A
Sbjct: 177 IELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAA 236
Query: 523 CSHAGLVNEGRRIFD-MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
C+ G + G + +M +EF+ ++ + ++D+ R G ++ A + M
Sbjct: 237 CADLGALTLGLWVHRFVMPQEFKDNIKISN--SLIDMYSRCGCIEFARQVFVKM 288
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
++ ++ +Y+R G + AR VF K + + WNSI+ NG + +L+ + M+
Sbjct: 264 ISNSLIDMYSRCGCIEFARQVFVKM---AKRTLVSWNSIIVGFAVNGFADESLEFFXAMQ 320
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFR---FSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
K G DG ++ + AC G F + VH ++ G + + +Y
Sbjct: 321 KEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCI------VDLY 374
Query: 182 AKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
+ G++ D+ + +++ +K N + + + + D + A L K L L+P +
Sbjct: 375 GRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKH--LFKLDPEGDAY 432
Query: 241 TSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
LLS+ +A G+ + ++ M+ RG++
Sbjct: 433 YVLLSNIYAAIGKWDGANNVRRTMKARGVQ 462
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 27/126 (21%)
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
++ W S ++ Y NG A A F M AG +P+ + F+ +LSAC+ D
Sbjct: 57 IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACA------------D 104
Query: 538 MMVREFRIEPQMEHYAC--------------MVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
F + YAC ++D+ + L A + N+ ++ N+
Sbjct: 105 FPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVK-NSVS 163
Query: 584 WGTLLN 589
W T+LN
Sbjct: 164 WNTMLN 169
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 348 bits (894), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 198/680 (29%), Positives = 332/680 (48%), Gaps = 84/680 (12%)
Query: 37 LLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L+ C L++ +H + +G FL ++ +Y++ G ++DA VF
Sbjct: 57 VLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIR--- 113
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ W++++ G + A +L+ MR+ G + FT ++ MG R+
Sbjct: 114 NPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRY--- 170
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
GQ +H + + GF+ + + N LI MY K + D K+F+ + + +SWN + SGF
Sbjct: 171 -GQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFY 229
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ C +F +M LEG +PN T+ S+L S
Sbjct: 230 DSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRS--------------------------- 262
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
C+ L GK +H +IK +D FV AL+
Sbjct: 263 --------CSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALV------------------- 295
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
YA+A ++A F +L D + SW+ +I +A +
Sbjct: 296 ------------DMYAKARCLEDAGVAFDRLVNRD--------IFSWTVIISGYAQTDQA 335
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
E+A+ FR+MQ + N T++ LS C+ A L GR++H V+ +I V + L
Sbjct: 336 EKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSAL 395
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
+++Y KCGC+E +F+ + +D+++WN++ISGY +G GE AL F M+ G PD
Sbjct: 396 VDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDE 455
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
F+ VLSACS GLV EG++ FD M + + I P +EHYACMVD+LGRAG E ++
Sbjct: 456 ATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIE 515
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
M + P + +W T+L +C++H N D E A ++F + SY+LLSNI+A+ GRW+D
Sbjct: 516 EMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDD 575
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
+R ++G+KK G SW+EV ++H+F S + ++ + L++L + + G
Sbjct: 576 VRNIRALMTSRGIKKEPGCSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGY 635
Query: 694 VPDNDIILWEMMGKKNVKRI 713
VP +++L + K+ ++ +
Sbjct: 636 VPKTEVVLHNVSNKEKMEHL 655
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 121/504 (24%), Positives = 219/504 (43%), Gaps = 86/504 (17%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN++L G + LKL+ KM++ FT V++ C GS R G+++H
Sbjct: 19 WNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLRE----GKVLH 74
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
L+ G + + + L+ MY+K G + D+ K+F K+R
Sbjct: 75 ALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIR--------------------- 113
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
P+ V W+++++ + G +E +LF +MR++G ++ ++
Sbjct: 114 --------------NPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLV 159
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
S ++ G+ IHG + K GFE N+V
Sbjct: 160 STATNMGDLRYGQSIHGCICKYGFE------------------------------SDNLV 189
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN---GRGEEA 396
S N LI Y ++ ++ +VF +M P+++SW+A++ F + GRG
Sbjct: 190 S-NPLIMMYMKSRCVEDGNKVFE--------AMTNPDLVSWNALLSGFYDSQTCGRGPR- 239
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
+F +M L N T +L C+ G+++H H+++ S + + V L++M
Sbjct: 240 --IFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDM 297
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y K CLE+ + F+++ +D+ +W +ISGY E A+ F +M G KP+
Sbjct: 298 YAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTL 357
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
+ LS CSH + GR++ + V+ A +VDL G+ G ++ A I K +
Sbjct: 358 ASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSA-LVDLYGKCGCMEHAEAIFKGL- 415
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVA 600
+ + W T+++ H + A
Sbjct: 416 ISRDIVSWNTIISGYSQHGQGEKA 439
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 180/380 (47%), Gaps = 44/380 (11%)
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
+EL +R+ E N V+W +LL+ +A+ G ++ + LF M++ + ++ VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
CA+ + GKV+H ++ G E F+ +L+ +Y K G V A +F++I ++V+W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
+A+IT + G EA E+F + + RP
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGA----RP-------------------------- 150
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
N T+S L+S L G+ IHG + + + LV N L+ MYMK
Sbjct: 151 ---------NQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSR 201
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
C+E+G+ VFE + DL++WN+++SG+ + F +M+ GFKP+ F++VL
Sbjct: 202 CVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLR 261
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
+CS G+++ +++ + A +VD+ +A L++A + + + +
Sbjct: 262 SCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTA-LVDMYAKARCLEDAG-VAFDRLVNRDI 319
Query: 582 YVWGTLLNSCRMHKNTDVAE 601
+ W +++ + TD AE
Sbjct: 320 FSWTVIISG---YAQTDQAE 336
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 192/629 (30%), Positives = 333/629 (52%), Gaps = 56/629 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARF---GRLFDARNVFETAPFDC 93
LL++C ++H+L Q+H L+V G + + +++L+ Y G ++ AR +F+ P
Sbjct: 18 LLRRCGSVHRLNQLHAHLVVHGVDD---VTSQILASYCALPAGGGVWYARQLFDRIP--- 71
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
++NS++R ++ + AL L M + G+L + FT P +++AC + ++
Sbjct: 72 DPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVM- 130
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
+ H V+++GF G V + N L+ YA G + DS + FD
Sbjct: 131 ---VTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFD------------------ 169
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
E ++ N V+W S+++ +A+ G E LF+ MR++G+
Sbjct: 170 -----------------EMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEF 212
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ +L C+ GK++H ++ G + + NAL+ +YGK GD+ +A F +
Sbjct: 213 TLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMM 272
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
KN VSW +++ + A+ D A + F Q+ + ++ISW+A+I + GR
Sbjct: 273 PFKNAVSWTSMLCALAKRASIDAARDWFEQIPE--------KSIISWNAMISCYVQGGRF 324
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
EALDL+ +M+L + + T++ +LS C + L G+ IH + N + + N L
Sbjct: 325 HEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSL 384
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
L+MY +CG ++ +F ++ K++I+WN++I M+G ++AL F M+ F PD
Sbjct: 385 LDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDE 444
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
+ FVA+LSAC+H GL+ G+ F M + ++P +EHYACMVDLLGR G L +A D++K
Sbjct: 445 ITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIK 504
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
+MPM P+ VWG LL +CR+H + + + + Q+ L + G ++L+SN+ + +WED
Sbjct: 505 DMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWED 564
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
++R + G+KK G S IE IH
Sbjct: 565 MKRLRKLMREWGMKKNMGVSSIETNSNIH 593
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 221/692 (31%), Positives = 349/692 (50%), Gaps = 103/692 (14%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L +LS+ RFG + A VF P + WN ++ +GL + AL LY +M
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMP---ERDVFSWNVMVGGYGKSGLLDEALDLYHRMM 181
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
GV D +TFP V+R+C + +R G+ VH HVL+ GF V ++N L+ MYAK
Sbjct: 182 WAGVRPDVYTFPCVLRSCGGVPDWRM----GREVHAHVLRFGFGEEVDVLNALMTMYAKC 237
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G + + K+FD + V + ISWN M +G N +C+ LELF M + ++PN +T TS
Sbjct: 238 GDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITS-- 295
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
+ V + +D+ K +HG +K GF
Sbjct: 296 ------------------------------VTVASGLLSDVT---FAKEMHGLAVKRGFA 322
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
V N+LI +Y G ++ A+ +FS ++ ++ ++W A+I+ Y + G D+A+EV++ +
Sbjct: 323 GDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALM 382
Query: 365 E----------------------KLDGGS-----MERPNVISW----SAVIGAFASNGRG 393
E LD G E IS+ +A++ +A + R
Sbjct: 383 EVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRI 442
Query: 394 EEALDLFRKMQ------------------------------LAKVVANSVTISGLLSVCA 423
++A+++F+ M LA V NSVT L+ CA
Sbjct: 443 DKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLADVKPNSVTFIAALAACA 502
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
+ AL G+EIH HV+R + + N L+++Y+KCG F KD+++WN
Sbjct: 503 ATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNI 562
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
MI+G+ +G G+ AL+ F +M++ G PD V FVA+L ACS G+V+EG +F M ++
Sbjct: 563 MIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKY 622
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
I P ++HYACMVDLL RAG L EA + + MP+ P+A VWG LLN CR+H++ ++ E
Sbjct: 623 SIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELA 682
Query: 604 ASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHM 663
A + L G ++LL ++YA + W+ A+VR + + KGL +G SW+EVK +H
Sbjct: 683 AKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHA 742
Query: 664 FSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
F + + ++ + VLE + +M+ G P
Sbjct: 743 FLTDDESHPQIREINTVLEGIYERMKASGYAP 774
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/525 (21%), Positives = 223/525 (42%), Gaps = 90/525 (17%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + + +VH ++ G + ++++YA+ G + AR VF++
Sbjct: 192 FPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMT 251
Query: 91 -FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
DC S WN+++ + NG L+L++ M V + T V A +
Sbjct: 252 VMDCIS----WNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSD-- 305
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
+F + +H ++ GF G+V N LI MYA +G M + +F ++ ++ ++W M
Sbjct: 306 --VTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMI 363
Query: 210 SGFALNFDCDGALELFKRMELEGLEPN-------------------------------FV 238
SG+ N D ALE++ ME+ + P+ F+
Sbjct: 364 SGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFI 423
Query: 239 TW----TSLLSSHARCGRLEETMDLFDMMRKRGIEVGA-------------EAIAVVLSV 281
++ ++L +A+ R+++ +++F M ++ + + EA+ +
Sbjct: 424 SYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM 483
Query: 282 CADLAADHM-----------------GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
AD+ + + GK IH V++ G E ++ NALI +Y K G
Sbjct: 484 LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTG 543
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A F K++VSWN +I + G D A+ F+Q+ K+ E P+ +++ A++
Sbjct: 544 YAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIG----ECPDEVTFVALL 599
Query: 385 GAFASNGRGEEALDLFRKM-QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
A + G E +LF M + +V N + ++ + + + L E + + + +
Sbjct: 600 CACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLT---EAYNFINEMPI 656
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+ V LLN GC H+ ++ K ++ +GY
Sbjct: 657 TPDAAVWGALLN-----GCRIHRHVELGELAAKYVLALEPNDAGY 696
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 207/683 (30%), Positives = 341/683 (49%), Gaps = 87/683 (12%)
Query: 16 NPSRPFSIITY----NNSLLDCFDHL--LQQCKTIHQLKQVHNQLIVTGANASAFLAARV 69
+PS S+ T+ N D F + + C L +H I+ G ++ F+ + +
Sbjct: 90 SPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLMLLHAHSIIDGYGSNVFVGSAL 149
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL 129
+ +Y +F R+ AR VF+ P + ++LWN+++ V N ++++++L+ +M GV
Sbjct: 150 VDLYCKFSRVVYARKVFDGMP---ERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVR 206
Query: 130 GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD 189
D T V+ A + + G + L++GF +++ LI +Y+K G
Sbjct: 207 VDSSTVTAVLPAAAELQELKV----GMGIQCLALKIGFGFCDYVLTGLISLYSKCG---- 258
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
D + A LF+R+ P+ + + +++S
Sbjct: 259 ---------------------------DVNTARLLFRRIN----RPDLIAYNAMISGFTA 287
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFV 309
G E ++ LF + G V + I ++ + + H+ IHGF +K G V
Sbjct: 288 NGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTV 347
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
A +Y K ++ +A++LF E EK +V+
Sbjct: 348 STAFTAIYNKLNEIDLARHLFDESPEKTVVA----------------------------- 378
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
W+A+I + NG E A+ LF++M + N+VTI+ +LS CA+ +L+
Sbjct: 379 ----------WNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLS 428
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
G+ +H + ++ NI V L++MY KCG + E +F+ + +K+ +TWN+MI GYG
Sbjct: 429 FGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYG 488
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
++G G AL + EM+ G+ P V F++VL ACSHAGLV EG IF MV ++RIEP +
Sbjct: 489 LHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLI 548
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
EHYACMVD+LGR+G L++A + +K MP+EP VWGTLL +C +HK+TD+A + ++F
Sbjct: 549 EHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFE 608
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
L + G Y+LLSNIY+ + AA +R K + L K G + IEV H+F SG+
Sbjct: 609 LDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDR 668
Query: 670 LQSDLKNVCEVLEELALQMENKG 692
S ++ LE+L +M G
Sbjct: 669 SHSHATDIYAKLEKLTGKMREMG 691
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 184/465 (39%), Positives = 276/465 (59%), Gaps = 11/465 (2%)
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM--GKVIH 295
V+WTS ++ H R G+L E F M+ G+ +LS C D + + G IH
Sbjct: 55 VSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSIH 114
Query: 296 GFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
+V K G + + V V AL+ +Y K G + +A +F E+ +N VSWN +I G
Sbjct: 115 AYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEV 174
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
EA+ +F Q+ + D ISW+++IG F G E+AL+ FR+MQLA V + VT
Sbjct: 175 GEAIVLFDQMSERDA--------ISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVT 226
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
I +L+ CA AL +G I+ V++ NI + N L++MY +CGC+ VFEQ+
Sbjct: 227 IISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMP 286
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
K+ L++WNSMI G+ +NG E AL F M + GF+PDGV+F L+ACSH+GLV+EG +
Sbjct: 287 KRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQ 346
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
FD+M R +I P++EHY C+VDL RAG L++A +++ NMPM+PN V G+LL +CR H
Sbjct: 347 FFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTH 406
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
+ +AE + + + + +Y+LLSNIYAA GRW+ A+KVR K G+ K G S
Sbjct: 407 GDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSS 466
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDI 699
IE+ IH F +G+ + +N+ +L+ L L++ G VP+ ++
Sbjct: 467 IEMDGSIHEFVAGDKTHVETQNIYAMLDHLFLELRICGYVPEIEV 511
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 174/321 (54%), Gaps = 11/321 (3%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
W S + ++ NG A + +M+ GV + TF ++ AC RF G +H
Sbjct: 57 WTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRF--GGSIH 114
Query: 160 NHVLQMGFQG-NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
+V ++G NV + L+ MY+K GQ+ ++ +FD++ V+N +SWN M G N +
Sbjct: 115 AYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEV 174
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
A+ LF +M E + ++WTS++ + G E+ ++ F M+ G+E I V
Sbjct: 175 GEAIVLFDQMS----ERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISV 230
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
L+ CA+L A +G I+ FV+K F+D + + N+LI +Y + G +++A+ +F ++ ++++
Sbjct: 231 LAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSL 290
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
VSWN++I +A G +EA+E F+ + K RP+ +S++ + A + +G +E L
Sbjct: 291 VSWNSMIVGFALNGHAEEALEFFNLMRK----EGFRPDGVSFTGALTACSHSGLVDEGLQ 346
Query: 399 LFRKMQLAKVVANSVTISGLL 419
F M+ + ++ + G L
Sbjct: 347 FFDIMKRTRKISPRIEHYGCL 367
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 118/235 (50%), Gaps = 37/235 (15%)
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA--ALNIGREI 434
++SW++ I NG+ EA F +MQ+A V N +T LLS C + L G I
Sbjct: 54 IVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSI 113
Query: 435 HGHVVRVSMN-KNILVQNGLLNMYMKC--------------------------GCLEEGH 467
H +V ++ ++ +N++V L++MY KC GC+ G
Sbjct: 114 HAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGE 173
Query: 468 -----LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
++F+Q+ ++D I+W SMI G+ G E AL F EM AG +PD V ++VL+A
Sbjct: 174 VGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAA 233
Query: 523 CSHAGLVNEGRRIFD-MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
C++ G + G I +M ++F+ ++ + ++D+ R G ++ A + + MP
Sbjct: 234 CANLGALGLGLWINRFVMKQDFKDNIKISN--SLIDMYSRCGCIRLARQVFEQMP 286
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++ +Y+R G + AR VFE P K S + WNS++ NG E AL+ + MRK G
Sbjct: 265 LIDMYSRCGCIRLARQVFEQMP---KRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGF 321
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
DG +F + AC G F I+ + L+ +Y++ G++
Sbjct: 322 RPDGVSFTGALTACSHSGLVDEGLQFFDIMKR---TRKISPRIEHYGCLVDLYSRAGRLE 378
Query: 189 DSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELFKRM-ELE-GLEPNFVTWTSLLS 245
D+ + + +K N + + + + D A L K + E++ G + N+V +++
Sbjct: 379 DALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGSDSNYVLLSNI-- 436
Query: 246 SHARCGRLEETMDLFDMMRKRGI 268
+A GR + + M+ GI
Sbjct: 437 -YAAVGRWDGASKVRKKMKALGI 458
>gi|297741017|emb|CBI31329.3| unnamed protein product [Vitis vinifera]
Length = 753
Score = 348 bits (893), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 213/671 (31%), Positives = 330/671 (49%), Gaps = 105/671 (15%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA---- 89
LL C + L +Q+H +I G L ++++ Y+ F L DA + E +
Sbjct: 106 LLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILH 165
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
PF WN ++ V NG + AL Y +M K G+ D FT+P V++AC
Sbjct: 166 PFP-------WNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKAC------- 211
Query: 150 FRFSFGQIVHNHVLQMGFQGNVH-IVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
L +GF VH +N +YA MG WN
Sbjct: 212 ----------GEELDLGFGKEVHESINA--SLYASMGM------------------WNEA 241
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
F ELF M E +E N + W ++ + R G + ++L MRK G
Sbjct: 242 F-------------ELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGS 288
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
+ + A+ + L C+ + +GK IH F I+ F + VKNALI +Y + D+K A
Sbjct: 289 HLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYL 348
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
LF QL ME ++I+W+++I
Sbjct: 349 LF--------------------------------QL-------MEAKSLITWNSIISGCC 369
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR-VSMNKNI 447
R EEA L R+M L + N VTI+ +L +CA A L G+E H ++ R ++
Sbjct: 370 HMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHL 429
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
L+ N L++MY + G + E VF+ + ++D +T+ SMI+GYGM G G+ AL FEEM
Sbjct: 430 LLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNF 489
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
KPD + +AVLSACSH+GLV +G+ +F+ M + + P +EH+ACM DL GRAGLL +
Sbjct: 490 QIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNK 549
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A +I++NMP +P +W TL+ +CR+H+NT++ E A ++ + E G Y+L++N+YAA
Sbjct: 550 AKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYAA 609
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
+G W AKVRI + G++K G +W++V F ++ ++ + +LE L +
Sbjct: 610 AGCWNKLAKVRIFMRDLGVRKAPGCAWVDVGTGFSPFLVDDTSNANADEIYPLLEGLTMV 669
Query: 688 MENKGCVPDND 698
M+ G + D
Sbjct: 670 MKEAGYISSED 680
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 149/353 (42%), Gaps = 58/353 (16%)
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
I+ +LS C D+ + G+ +HG +I GFE + + L+ Y + A +
Sbjct: 102 PISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVI---T 158
Query: 334 EEKNIV---SWNALITSYAEAGLCDEAVEVFSQL--------------------EKLD-- 368
E NI+ WN LI+SY G C +A+ + Q+ E+LD
Sbjct: 159 ENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLG 218
Query: 369 --------------------------GGSMERP----NVISWSAVIGAFASNGRGEEALD 398
GSM N+I W+ + G + G + AL+
Sbjct: 219 FGKEVHESINASLYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALE 278
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
L +M+ +SV + L C+ +G+EIH +R + V+N L+ MY
Sbjct: 279 LLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYS 338
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
+C L+ +L+F+ +E K LITWNS+ISG E A EM+ G +P+ V +
Sbjct: 339 RCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIAS 398
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
VL C+ + G+ M R + + + +VD+ R+G + EA +
Sbjct: 399 VLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRV 451
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 25/201 (12%)
Query: 397 LDLFRKMQLAKVVANSVT-------ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
LD F+ + L ++ A+S + IS LLS C + +L GR++HGH++ + ++ ++
Sbjct: 78 LDAFKTVSLIRLHASSASQDLIVHPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPIL 137
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
L+ Y L + H++ E WN +IS Y NG + AL+ +++M++ G
Sbjct: 138 VPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGI 197
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
+PD + +VL AC + G+ + H + L G+ EA
Sbjct: 198 RPDNFTYPSVLKACGEELDLGFGKEV---------------HESINASLYASMGMWNEAF 242
Query: 570 DIVKNM---PMEPNAYVWGTL 587
++ +M +E N +W T+
Sbjct: 243 ELFGSMWAEDIELNIIIWNTI 263
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 348 bits (893), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 177/467 (37%), Positives = 277/467 (59%), Gaps = 11/467 (2%)
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM--GKVIH 295
V WTS L+ + R G+L E F MR G+E +LS CAD ++ +H
Sbjct: 58 VLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSLH 117
Query: 296 GFVIKGGFED-YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
G+ K G + +V V ALI +Y K + A+ +F + KN VSWN ++ + G
Sbjct: 118 GYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGEI 177
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
+ A+++F ++ D ISW+A+I +G E+AL+ F +MQ + V A+ V+
Sbjct: 178 ELAIQLFDEMPTRDA--------ISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVS 229
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
I +L+ CA+ AL +G +H V+ NI + N L++MY +CGC+E VF ++
Sbjct: 230 IIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMA 289
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
K+ L++WNS+I G+ +NG + +L F M + GFKPDGV++ L+ACSHAGLVN+G
Sbjct: 290 KRTLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLE 349
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+FD M +I P++EHY C+VDL GRAG L++A ++++ MPM+PN V G+LL +CR H
Sbjct: 350 LFDNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTH 409
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
+ ++AE + +F L E Y+LLSNIYAA G+W+ A VR + K +G++K G S
Sbjct: 410 GDVNLAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSS 469
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+E+ K+H F +G++ +D N+ +L+ L +++ G VP +D IL
Sbjct: 470 VEIDGKVHEFVAGDNYHADADNIYSMLDLLCHELKVCGYVPGSDTIL 516
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 183/377 (48%), Gaps = 42/377 (11%)
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
+LW S L NG A + +MR GV + TF ++ AC S F F+
Sbjct: 58 VLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFA--SS 115
Query: 158 VHNHVLQMGFQ-GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H + + G G+V + LI MY+K Q+ + K+F + VKN +SWN M +GF N
Sbjct: 116 LHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNG 175
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
+ + A++LF M + ++WT+L++ + G E+ ++ F M++ G+ +I
Sbjct: 176 EIELAIQLFDEMPTR----DAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSII 231
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
VL+ CADL A +G +H FV+ F+D + + N+LI +Y + G ++ A+ +F ++ ++
Sbjct: 232 AVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKR 291
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLE----KLDGGSME------------------- 373
+VSWN++I +A G DE++E F ++ K DG S
Sbjct: 292 TLVSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELF 351
Query: 374 ---------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
P + + ++ + GR E+AL++ +M + N V + LL+ C
Sbjct: 352 DNMKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKP---NEVVLGSLLAACRT 408
Query: 425 SAALNIGREIHGHVVRV 441
+N+ + H+ ++
Sbjct: 409 HGDVNLAERLMKHLFKL 425
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 109/234 (46%), Gaps = 37/234 (15%)
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE--SAALNIGREI 434
++ W++ + + NG+ EA F +M+LA V N +T LLS CA+ S + +
Sbjct: 57 IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
Query: 435 HGHVVRVSMNK-NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN-- 491
HG+ + ++ +++V L++MY KC L VF + K+ ++WN+M++G+ N
Sbjct: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNGE 176
Query: 492 -----------------------------GLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
G E AL F +M +G D V+ +AVL+A
Sbjct: 177 IELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLAA 236
Query: 523 CSHAGLVNEGRRIFD-MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
C+ G + G + +M +EF+ ++ + ++D+ R G ++ A + M
Sbjct: 237 CADLGALTLGLWVHRFVMPQEFKDNIKISN--SLIDMYSRCGCIEFARQVFVKM 288
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 96/210 (45%), Gaps = 16/210 (7%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
++ ++ +Y+R G + AR VF K + + WNSI+ NG + +L+ + M+
Sbjct: 264 ISNSLIDMYSRCGCIEFARQVFVKM---AKRTLVSWNSIIVGFAVNGFADESLEFFYAMQ 320
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFR---FSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
K G DG ++ + AC G F + VH ++ G + + +Y
Sbjct: 321 KEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCI------VDLY 374
Query: 182 AKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
+ G++ D+ + +++ +K N + + + + D + A L K L L+P +
Sbjct: 375 GRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKH--LFKLDPEGDAY 432
Query: 241 TSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
LLS+ +A G+ + ++ M+ RG++
Sbjct: 433 YVLLSNIYAAIGKWDGANNVRRTMKARGVQ 462
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 27/126 (21%)
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
++ W S ++ Y NG A A F M AG +P+ + F+ +LSAC+ D
Sbjct: 57 IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACA------------D 104
Query: 538 MMVREFRIEPQMEHYAC--------------MVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
F + YAC ++D+ + L A + N+ ++ N+
Sbjct: 105 FPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVK-NSVS 163
Query: 584 WGTLLN 589
W T+LN
Sbjct: 164 WNTMLN 169
>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 739
Score = 348 bits (893), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 218/722 (30%), Positives = 362/722 (50%), Gaps = 110/722 (15%)
Query: 27 NNSLLDC---FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
N+ L C + LL C + LK++H LIV+ +A++++++Y++ L D R
Sbjct: 44 NSHYLTCSFPYSSLLHSCNNLQALKRIHASLIVSSGFQPLSVASKLITLYSQ---LNDFR 100
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
+ F + ++++WNSI++ +V +GL+ AL Y +MR+LGV D FTFP++ +A
Sbjct: 101 SAFSICNSFEEPNTVIWNSIIKSHVDSGLFGYALLQYGRMRELGVAHDSFTFPIINQAIW 160
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
+G R +G+ VH ++MGF +V+ N ++ +Y K G + ++ KLFD++ ++
Sbjct: 161 SLGC---RVEYGETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRD-- 215
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
V+WTS++S + LF+ M
Sbjct: 216 ---------------------------------LVSWTSIISGYIYGESFSRGFKLFNKM 242
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
R +E + + V+L C+ + + G+ +H +VIK GF V+N+++ +Y K G
Sbjct: 243 RME-MEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSILRMYTKTGGS 301
Query: 324 -KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE--------VFSQLEKL------- 367
+ + FSEIEE++I+SWN LI Y+ G E E V S +E L
Sbjct: 302 GEEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMRREVTSSIESLTLVVSAI 361
Query: 368 -------DGG--------------------------------------SMERPNVISWSA 382
+GG + N I+WS+
Sbjct: 362 ANCANLSEGGMLHCSAIKTGLHDTVLMTCLLALYAKCGALEISAQLFRDIPHRNSITWSS 421
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR-- 440
++ F NG +EA++L+++M + + N IS L+ AL +G+ H +R
Sbjct: 422 MMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLGALQLGKATHAFFIRNL 481
Query: 441 --VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
+ ++ LLNMY++CG + + F ++ KD++TW SMI G+G +GL AL
Sbjct: 482 SSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTWTSMIEGFGTHGLAFEAL 541
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
F+ M+E+ +P+ V F+++LSACSH+GLV EG +F M FRIEP + HY CMVDL
Sbjct: 542 KFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVFHSMKWGFRIEPDLNHYTCMVDL 601
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
LGR+G L+EA ++ + P++ +WG LL + R+H++ + E A ++ L + G Y
Sbjct: 602 LGRSGKLKEALTVILKLVTCPDSRIWGALLAASRVHEDKKLGEYAAEKLLELEPDNVGYY 661
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
L SNI A+ RW + +VR + LKK G S IEVK IH F SG++ ++ +C
Sbjct: 662 TLWSNIEASLERWGEVEEVRRVMHERDLKKKPGWSCIEVKGMIHGFVSGDTSHHQVEEIC 721
Query: 679 EV 680
++
Sbjct: 722 KM 723
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 348 bits (893), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 190/566 (33%), Positives = 315/566 (55%), Gaps = 18/566 (3%)
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIV-NELIGMYAKMGQMSDS 190
FTF V R C +++H L+ IV N LI MYA +G D+
Sbjct: 102 AFTFHFVFRCCAAGAGA----GLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDA 157
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
+ FD+V VK+ + W + G G L+ +R+ ++ E N V+WTSL++ ++R
Sbjct: 158 RRAFDEVPVKDAVVWATVIGGLVRW----GLLDEARRLLVQAPERNVVSWTSLIAGYSRA 213
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
GR + + F+ M G+E A+ LS C+ L G+++H V K + +
Sbjct: 214 GRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLV 273
Query: 311 NALICVYGKHGDVKVAQNLFSEIEE-KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
LI +Y K GD+ AQ +F + + WN +I Y + G D A +F Q+ D
Sbjct: 274 VTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARD- 332
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
VI+++++I + +GR +AL LF +++ + A++ T+ LL+ CA AL
Sbjct: 333 -------VITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALP 385
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
GR +H + + + +++ + L++MYMKCG ++E VF ++ ++D+ TW++MI+G
Sbjct: 386 QGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIAGLA 445
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
NG+G +AL +F +M GF+P V ++AVL+ACSH+ L+NEGR+ F+ M ++ PQ+
Sbjct: 446 FNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQI 505
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
EHY CM+DLL R+GLL EA +V+ MPM+PNA +W ++L++CR+HKN D+A A +
Sbjct: 506 EHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLLK 565
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
L E Y+ L NIY S +W +A ++R+ + +G+KK AG S I V ++H F +
Sbjct: 566 LAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQGVKKTAGYSSITVAGQVHKFVVNDQ 625
Query: 670 LQSDLKNVCEVLEELALQMENKGCVP 695
+ ++EE+A ++++ G P
Sbjct: 626 SHPWTLEIITMMEEIARRLKSAGYSP 651
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 104/192 (54%), Gaps = 7/192 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y + G + AR++F+ + +NS++ + +G +AL+L++++R+ G+ D
Sbjct: 312 YCKLGHVDIARSLFDQMG---ARDVITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADN 368
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
FT ++ AC +G+ G+ +H + Q + +V++V L+ MY K G++ ++
Sbjct: 369 FTVVSLLTACASLGA----LPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATA 424
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+F ++ ++ +W+ M +G A N ALE F +M+ +G +P VT+ ++L++ +
Sbjct: 425 VFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSL 484
Query: 253 LEETMDLFDMMR 264
L E F+ MR
Sbjct: 485 LNEGRQHFNEMR 496
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 117/270 (43%), Gaps = 38/270 (14%)
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI-LVQNGLLNMYMKCGCLEEGHLV 469
++ T + CA A + R +H +R + +V N L++MY G ++
Sbjct: 101 SAFTFHFVFRCCAAGAGAGLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRA 160
Query: 470 FEQIEKKD-------------------------------LITWNSMISGYGMNGLGENAL 498
F+++ KD +++W S+I+GY G +A+
Sbjct: 161 FDEVPVKDAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAV 220
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
F M+ G +PD VA + LSACS + G R+ ++V + RI+ + ++D+
Sbjct: 221 YCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFG-RLLHLLVGKKRIQMTDKLVVTLIDM 279
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS-CRMHKNTDVAEAMASQIFGLITETTGS 617
+ G + +A + + W +++ C++ + D+A ++ Q+ G T +
Sbjct: 280 YAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKL-GHVDIARSLFDQM-GARDVITFN 337
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
M+ I+ SGR DA ++ + + G++
Sbjct: 338 SMITGYIH--SGRLRDALQLFMQLRRHGMR 365
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 216/662 (32%), Positives = 359/662 (54%), Gaps = 26/662 (3%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLS----IYARFGRLFDARNVFETAPFDCKSSS 97
+++ Q Q+H L +G A A +LS + L ++F+ P S++
Sbjct: 10 RSVRQASQLHALLTTSGRIAHRPSAEHLLSSLTNTISAPRHLRYVLSLFDRLP---HSTT 66
Query: 98 LLWNSILR--VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
L+++ LR + S G ++ + L +MR GV FTF V R C R
Sbjct: 67 FLFDTALRACLQASAGA-DHPVLLLRRMRSGGVRTGAFTFHFVFRCCAAGARARAGLCL- 124
Query: 156 QIVHNHVLQMGFQGNVHIV-NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
++H L+ +V N LI MYA MG D+ + FD++ K+ + W + G
Sbjct: 125 -MLHAACLRTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVR 183
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
G L+ +R+ ++ E N V+WTSL++ ++R GR + + F+ M G+ A
Sbjct: 184 W----GLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVA 239
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ LS C+ L +G+++H V + + ALI +Y K GD+ AQ +F +
Sbjct: 240 VIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVG 299
Query: 335 E-KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
+ WNA+I Y + G D A +F Q+ D VI+++++I + +GR
Sbjct: 300 RGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARD--------VITFNSMITGYIHSGRL 351
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
+AL LF +M+ + A++ T+ LL+ CA AL GR +H + + + +++ + L
Sbjct: 352 RDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTAL 411
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
L+MYMKCG ++E VF ++ ++D+ TW +MI+G NG+G++AL +F +M GF+P
Sbjct: 412 LDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTS 471
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
V ++AVL+ACSH+ L++EGR F+ M ++ PQ+EHY CM+DLL R+GLL EA +V+
Sbjct: 472 VTYIAVLTACSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQ 531
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
MPM+PNA +WG++L++CR+HKN D+A A + L E Y+ L NIY S +W D
Sbjct: 532 TMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWAD 591
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
A +VR+ + +G+KK AG S I V ++H F + + + ++EE+A ++++ G
Sbjct: 592 AKRVRMLMEERGVKKTAGYSSITVAGQVHKFVANDQSHPWTLEIMAMMEEIACRLKSVGY 651
Query: 694 VP 695
P
Sbjct: 652 SP 653
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 170/440 (38%), Positives = 269/440 (61%), Gaps = 8/440 (1%)
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
+ VL C L+ GK IHG K GF +F++N ++ +YG G++ A LF ++ +
Sbjct: 14 SFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMPQ 73
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
++ V+WN +I A+ G D A F + M NV SW+++I F G+ E
Sbjct: 74 RDAVTWNIVIAQLAKRGDIDGAYGFFLR--------MPNKNVRSWTSMISGFVQCGKPNE 125
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
A+DLF K++ V N VT+ +L+ CA+ L++GR +H + + +N+ V N L++
Sbjct: 126 AIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLID 185
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY+KCGCLE VF ++E++ +++W++MI+G M+G E AL F EMI+ G KP+GV
Sbjct: 186 MYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVT 245
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
F+ +L ACSH GL++EGRR F M ++ + PQ+EHY C+VDL RAGLL+EA + + +M
Sbjct: 246 FIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSM 305
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
P++PN VWG LL C++HKN D+AE + L G Y+++SNIYA + RWEDAA
Sbjct: 306 PIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAA 365
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
+VR K +G+KK +G S I V +H F +G+ +++C++ ++L ++M+ +G P
Sbjct: 366 RVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYAP 425
Query: 696 DNDIILWEMMGKKNVKRIQR 715
++L +M K+ K + R
Sbjct: 426 KTSVVLLDMEEKEKEKFLYR 445
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 182/390 (46%), Gaps = 58/390 (14%)
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
MR VL D FT V++AC + G+ +H ++GF N+ + N ++ +Y
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDV----VNGKTIHGLFQKLGFGSNLFLQNMILNLYG 56
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
G+M D+ LF+K+ ++ ++WN++ + A D DGA F RM N +WTS
Sbjct: 57 LCGEMGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMP----NKNVRSWTS 112
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
++S +CG+ E +DLF + + + VL+ CADL +G+++H + K G
Sbjct: 113 MISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSG 172
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
F+ V V N LI +Y K G ++ A+ +F E+EE+ +VSW+A+I A G +EA+ +FS
Sbjct: 173 FKRNVHVCNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFS 232
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
++ KL V N VT GLL C
Sbjct: 233 EMIKLG---------------------------------------VKPNGVTFIGLLHAC 253
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQ----NGLLNMYMKCGCLEEGH-LVFEQIEKKD 477
+ ++ GR ++ + ++ Q +++++ + G LEE H + K +
Sbjct: 254 SHMGLIDEGRRF---FASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPN 310
Query: 478 LITWNSMISGYGMN---GLGENALATFEEM 504
+ W +++ G ++ L E A+ E+
Sbjct: 311 GVVWGALLGGCKVHKNIDLAEEAIKHLSEL 340
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 113/249 (45%), Gaps = 41/249 (16%)
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
M+L V+ ++ T S +L C + + + G+ IHG ++ N+ +QN +LN+Y CG
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 463 LEEGHLVFEQIEKKDLITWN-------------------------------SMISGYGMN 491
+ + L+FE++ ++D +TWN SMISG+
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G A+ F ++ + +P+ V V+VL+AC+ G ++ GR +V E+ + +
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGR-----IVHEYSTKSGFKR 175
Query: 552 --YAC--MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
+ C ++D+ + G L+ A + M E W ++ MH + A + S++
Sbjct: 176 NVHVCNTLIDMYVKCGCLENARRVFYEME-ERTVVSWSAMIAGLAMHGQAEEALCLFSEM 234
Query: 608 FGLITETTG 616
L + G
Sbjct: 235 IKLGVKPNG 243
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 103/223 (46%), Gaps = 12/223 (5%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH +G + + ++ +Y + G L +AR VF + + + W++++
Sbjct: 164 VHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEME---ERTVVSWSAMIAGLAM 220
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRFSFGQIVHNHVLQMGFQ 168
+G E AL L+ +M KLGV +G TF ++ AC MG R F + ++ G
Sbjct: 221 HGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADY----GVI 276
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELFKR 227
+ ++ ++++ G + ++ + + +K N + W + G ++ + D A E K
Sbjct: 277 PQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKH 336
Query: 228 M-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+ EL+ L + S + + A R E+ + +M+ RG++
Sbjct: 337 LSELDPLNDGYYVVISNIYAEAE--RWEDAARVRKLMKDRGVK 377
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 210/655 (32%), Positives = 321/655 (49%), Gaps = 82/655 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL-WNSILRV 106
K++H + ++ +A ++ +YA+ G A+ +F + + L+ W++I+
Sbjct: 349 KEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLF----WGLQGRDLVAWSAIIAA 404
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
V G E AL L+ +M+ + + T ++ AC + + G+ +H ++
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL----GKSIHCFTVKAD 460
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
++ L+ MYAK G + AL F
Sbjct: 461 MDSDLSTGTALVSMYAKCGFFT-------------------------------AALTTFN 489
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
RM + VTW SL++ +A+ G +D+F +R I A + V+ CA L
Sbjct: 490 RMS----SRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLN 545
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
G IHG ++K GFE VKNALI +Y K G + A+ LF++ +
Sbjct: 546 DLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTD------------ 593
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
F++ E ++W+ +I A+ NG +EA+ F +M+L
Sbjct: 594 --------------FTKDE------------VTWNVIIAAYMQNGHAKEAISSFHQMRLE 627
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
NSVT +L A AA G H ++++ N LV N L++MY KCG L
Sbjct: 628 NFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYS 687
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
+F +++ KD ++WN+M+SGY ++G G+ A+A F M E+ + D V+FV+VLSAC H
Sbjct: 688 EKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHX 747
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GLV EGR+IF M ++ I+P +EHYACMVDLLGRAGL E +K MP+EP+A VWG
Sbjct: 748 GLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGA 807
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL SCRMH N + E + L +++LS+IYA SGRW DA K R GL
Sbjct: 808 LLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGL 867
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
KK G SW+E+K K+H F G+ L+++ + L +ME G VPD +L
Sbjct: 868 KKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVL 922
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 151/565 (26%), Positives = 254/565 (44%), Gaps = 88/565 (15%)
Query: 25 TYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
TY N L + LL CK ++ L Q+H Q+IV+G + ++++Y+ F + AR+
Sbjct: 28 TYTNYLH--YPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSIT-HLINLYSLFHKCDLARS 84
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
VF++ P S +LWNS++R + Y AL++Y M + G+ D +TF V++AC
Sbjct: 85 VFDSTP---NPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACT- 140
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
G+ + G H + + G + +V I L+ MY+KMG + + ++FDK+ ++ ++
Sbjct: 141 -GALNLQE--GVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVA 197
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
WN M +G L S C E +D F M+
Sbjct: 198 WNAMIAG-------------------------------LSQSEDPC----EAVDFFRSMQ 222
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
G+E + ++ + L+ + + IHG+V + F V N LI +Y K GDV
Sbjct: 223 LVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAV--SNGLIDLYSKCGDV- 279
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
D A VF Q+ D +SW ++
Sbjct: 280 ------------------------------DVARRVFDQMVDQDD--------VSWGTMM 301
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
+A NG E L+LF KM+L V N V+ AE+ L G+EIHG ++ ++
Sbjct: 302 AGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRID 361
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
+ILV L+ MY KCG E+ +F ++ +DL+ W+++I+ G E AL+ F+EM
Sbjct: 362 SDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEM 421
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
KP+ V +++L AC+ L+ G+ I V+ ++ + +V + + G
Sbjct: 422 QNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKA-DMDSDLSTGTALVSMYAKCGF 480
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLN 589
A M + W +L+N
Sbjct: 481 FTAALTTFNRMSSR-DIVTWNSLIN 504
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 217/689 (31%), Positives = 353/689 (51%), Gaps = 97/689 (14%)
Query: 23 IITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTG-ANASAFLAARVLSIYARFGR--- 78
+ T +S+L CF +C T LKQ + LI +G A+ + FL+ + S G
Sbjct: 4 LATLRHSILCCF----HKCGTFDHLKQTTSILITSGLAHHTFFLSDILRSATKDLGYTLL 59
Query: 79 LFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLV 138
LFD P+ LWN+I+R ++ + L Y ++R GV+ D TFPL+
Sbjct: 60 LFDRL----ATPY-----IFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLL 110
Query: 139 IRA-CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
++A K F+F + H+++ G + + N L+ +A G +
Sbjct: 111 LKAFSKLRNENPFQF------YAHIVKFGLDFDAFVQNSLVSAFAHCGYV---------- 154
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
DC +R+ +E + + V+WT+L++ R GR E +
Sbjct: 155 -------------------DCS------RRLFIETAKKDVVSWTALINGCLRNGRAVEAL 189
Query: 258 DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
+ F MR G+EV I VL A L G+ +HGF ++ G +
Sbjct: 190 ECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIW----------- 238
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
DV V +AL+ Y++ G CD+AV+VF++ M N+
Sbjct: 239 ----DVYVG---------------SALVDMYSKCGYCDDAVKVFNE--------MPTRNL 271
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
+SW A+I + R +EAL +F++M + + N T++ L+ CA+ +L+ GR +H +
Sbjct: 272 VSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEY 331
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
V R + N + L++MY KCGC++E LVFE++ KD+ W +MI+G M G ++
Sbjct: 332 VDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSS 391
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
L F +MI + +P+GV F+ VLSAC+H GLV+EG +F +M+ ++R+EP ++HY CMVD
Sbjct: 392 LNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVD 451
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
LLGRAG L+EA +++MPMEP VWG L + C +HK ++ E + + + L +G
Sbjct: 452 LLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGR 511
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
Y+LL+N+Y+ +WE AA VR K KG+ K G SWIEV IH F + + ++ NV
Sbjct: 512 YILLANLYSRCQKWEAAANVRRLMKGKGVDKSPGCSWIEVNGVIHEFIAFDKSHTESINV 571
Query: 678 CEVLEELALQMENKGCVPDNDIILWEMMG 706
+LE ++ Q++ D++++ + + G
Sbjct: 572 YMMLESVSAQLKLATYALDSNLLTFTIDG 600
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 202/674 (29%), Positives = 347/674 (51%), Gaps = 87/674 (12%)
Query: 37 LLQQC---KTIHQLKQVHNQLIVTGANASAF-LAARVLSIYARFGRLFDARNVFETAPFD 92
LLQ C K I +++H + + + F L R++++Y+ G D+R VF+
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLR-- 168
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV-LGDGFTFPLVIRACKFMGSFRFR 151
+ + WN+I+ N L+E+A+ ++ ++ + D FT P VI+AC +
Sbjct: 169 -RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGL----LD 223
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK-LFDKVRVKNYISWNMMFS 210
GQI+H +M +V + N LI MY K G + ++ K +FD + K SWN
Sbjct: 224 LGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWN---- 279
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
+LL +A+ + +DL+ M G++
Sbjct: 280 -------------------------------ALLCGYAQNSDPRKALDLYLQMTDSGLDP 308
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
I +L C+ + + H G+ IHGF ++ G F+ +L+ +Y G AQ LF
Sbjct: 309 DWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLF 368
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
DG ME +++SW+ +I ++ N
Sbjct: 369 -------------------------------------DG--MEHRSLVSWNVMIAGYSQN 389
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
G +EA++LFR+M + + I + C++ +AL +G+E+H ++ + ++I V
Sbjct: 390 GLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVS 449
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
+ +++MY K GC+ +F+++ +KD+ +WN +I+GYG++G G+ AL FE+M+ G K
Sbjct: 450 SSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLK 509
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
PD F +L ACSHAGLV +G F+ M+ IEP++EHY C+VD+LGRAG + +A
Sbjct: 510 PDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALR 569
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
+++ MP +P++ +W +LL+SCR+H N + E +A+++ L E +Y+L+SN++A SG+
Sbjct: 570 LIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGK 629
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
W+D +VR K GL+K AG SWIEV K+H F G+ + +L+ V E L +++ +
Sbjct: 630 WDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISS 689
Query: 691 KGCVPDNDIILWEM 704
G PD +L ++
Sbjct: 690 IGYTPDTGSVLHDL 703
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 133/325 (40%), Gaps = 52/325 (16%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K++H + F+++ ++ +YA+ G + ++ +F+ +S WN I+
Sbjct: 431 KELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVAS---WNVIIAGY 487
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS-FGQIVHNHVLQMG 166
+G + AL+L+ KM +LG+ D FTF ++ AC G F Q+++ H ++
Sbjct: 488 GIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPK 547
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+ +V+ M + G++ D+ +L +
Sbjct: 548 LEHYTCVVD----MLGRAGRIDDALRLIE------------------------------- 572
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
E+ G +P+ W+SLLSS C R+ + L + + + +E+ E + + A
Sbjct: 573 --EMPG-DPDSRIWSSLLSS---C-RIHGNLGLGEKVANKLLELEPEKPENYVLISNLFA 625
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNA---LICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
GK ++G +D K+A I V GK + + + E+EE +W
Sbjct: 626 GS--GKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVR-ETWRR 682
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLD 368
L + G + V LE+ D
Sbjct: 683 LEVKISSIGYTPDTGSVLHDLEEED 707
>gi|242041125|ref|XP_002467957.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
gi|241921811|gb|EER94955.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
Length = 650
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 212/662 (32%), Positives = 335/662 (50%), Gaps = 62/662 (9%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVL--SIYARFGRLFDA--------- 82
D L +C++ L ++H Q + +G A A+ A+R+L + A RL
Sbjct: 7 LDAQLSRCRSARHLLEIHAQFLASGLLADAYAASRLLLFTTSATAARLLPQPLHHSLQLF 66
Query: 83 RNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
R V F C N+++R + GL LY M D +T PL+ AC
Sbjct: 67 RLVRSPNAFTC-------NTLIRAALRQGLPHLCFPLYASM---PAAPDTYTHPLLAAAC 116
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
G R G+ VH+H ++ GF N+++ N L+ MY+ G ++ + ++FD V +
Sbjct: 117 AARGDARE----GRQVHSHAVKHGFGDNLYLRNALMHMYSACGCVAGARRVFDAGPVWDA 172
Query: 203 ISWNMMFSGFALNFDCDGALELFKRME--------------------------LEGLEP- 235
+SWN + + + + D + A+ +F RM +G E
Sbjct: 173 VSWNTILATYVRDGDVEQAVGVFARMPERSAAAVSSMVALFARTGMVEEARGVFDGAEHR 232
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
+ TWT+++S R E + +F MR+ G V + V++ CA G+V H
Sbjct: 233 DAFTWTAMISCFERNDLFVEALAVFSDMREEGWPVDEAVMVSVVAACAKSEVIQNGEVCH 292
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
G V++ G V V+NALI +Y DV A+ LF E + SWN++I+ Y + G +
Sbjct: 293 GLVVRAGLGSRVNVQNALIHMYSSCLDVVAARRLFDSSESLDHFSWNSMISGYLKNGRVE 352
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
+A +F+ + D +SWSA+I N + EAL +F M+ ++ + VT+
Sbjct: 353 DAKALFNVMPDKDN--------VSWSAMIAGCVQNNQSSEALTVFDNMRAHEIKPDEVTL 404
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
++S C AL G+ +H ++ + N I++ L++MYMKCGC+E VF+ +E+
Sbjct: 405 VSVISACTNLCALEQGKLVHEYIRQYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMVEE 464
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFK-PDGVAFVAVLSACSHAGLVNEGRR 534
K WN++I G MNGL +L F EM +G P + F VLSAC H GLV EGR+
Sbjct: 465 KGTPCWNAVIVGLAMNGLVTRSLDMFSEMETSGIAVPSEITFTGVLSACRHGGLVEEGRQ 524
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F +M +++I P + HY CMVDLLGRAG ++EA D++++MPM P+ WG LL +C H
Sbjct: 525 FFKLMQNKYQIIPNIRHYGCMVDLLGRAGYVREAEDLIQSMPMSPDVPAWGALLGACWKH 584
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
+++V E + ++ L G +LSNIYA+ G W+ +R S K + + KVAG S
Sbjct: 585 SDSEVGERVGKKLVKLDPHHDGFQTMLSNIYASEGMWQCVKDLRGSMK-QHVAKVAGCSV 643
Query: 655 IE 656
+E
Sbjct: 644 VE 645
>gi|297729323|ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial [Oryza sativa Japonica Group]
Length = 614
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 196/614 (31%), Positives = 312/614 (50%), Gaps = 102/614 (16%)
Query: 83 RNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
R ++P C S+ W G +AL + M + D FT+ +I+A
Sbjct: 94 RTPTPSSPTPC-SAPTRWG---------GAPRDALAAFSAMPRR----DSFTYSFLIKAL 139
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
G R VH+HV+++G + + N LI Y+K G SD+ K+FD
Sbjct: 140 SAAGVAPVR-----AVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFD------- 187
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
E E + V+W + +++ R G L LFD
Sbjct: 188 ----------------------------EMPERDVVSWNTAMAAMVREGELAGVRKLFDE 219
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
M E N ++ Y K G+
Sbjct: 220 MP---------------------------------------EKDTVSWNTILDGYTKAGE 240
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
V+ A LF + E+N+VSW+ +++ Y + G + A +F + M N+++W+
Sbjct: 241 VEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDK--------MPSKNLVTWTI 292
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS 442
++ A A G +EA LF +M+ A V + + +L+ CAES +L++G+ IH +V + +
Sbjct: 293 MVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRN 352
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFE-QIEKKDLITWNSMISGYGMNGLGENALATF 501
+ ++ V N L++M+ KCGC+ VF+ + +KD ++WNS+I G+ M+G G+ AL F
Sbjct: 353 LGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELF 412
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
+M + GF PD V + VLSAC+H G V+EGRR F M R++ I PQ+EHY CM+DLLGR
Sbjct: 413 AQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGR 472
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLL 621
GL++EA D++K+MP EPN +WG+LL++CR+HKN + AE +++ L G+Y +L
Sbjct: 473 GGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVL 532
Query: 622 SNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVL 681
SNIYA +G+W D AK R+ K G +K AG SW+E+ H F+ G+ D + E++
Sbjct: 533 SNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDRKHQDSDQISEMV 592
Query: 682 EELALQMENKGCVP 695
+ L+ +++ GCVP
Sbjct: 593 DRLSSHVKHVGCVP 606
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 192/629 (30%), Positives = 333/629 (52%), Gaps = 56/629 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARF---GRLFDARNVFETAPFDC 93
LL++C ++H+L Q+H L+V G + + +++L+ Y G ++ AR +F+ P
Sbjct: 18 LLRRCGSVHRLNQLHAHLVVHGVDD---VTSQILASYCALPAGGGVWYARQLFDRIP--- 71
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
++NS++R ++ + AL L M + G+L + FT P +++AC + ++
Sbjct: 72 DPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVM- 130
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
+ H V+++GF G V + N L+ YA G + DS + FD
Sbjct: 131 ---VTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFD------------------ 169
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
E ++ N V+W S+++ +A+ G E LF+ MR++G+
Sbjct: 170 -----------------EMVDRNVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEF 212
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ +L C+ GK++H ++ G + + NAL+ +YGK GD+ +A F +
Sbjct: 213 TLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMM 272
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
KN VSW +++ + A+ D A + F Q+ + ++ISW+A+I + GR
Sbjct: 273 PFKNAVSWTSMLCALAKRASIDAARDWFEQIPE--------KSIISWNAMISCYVQGGRF 324
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
EALDL+ +M+L + + T++ +LS C + L G+ IH + N + + N L
Sbjct: 325 HEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSL 384
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
L+MY +CG ++ +F ++ K++I+WN++I M+G ++AL F M+ F PD
Sbjct: 385 LDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDE 444
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
+ FVA+LSAC+H GL+ G+ F M + ++P +EHYACMVDLLGR G L +A D++K
Sbjct: 445 ITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIK 504
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
+MPM P+ VWG LL +CR+H + + + + Q+ L + G ++L+SN+ + +WED
Sbjct: 505 DMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWED 564
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
++R + G+KK G S IE IH
Sbjct: 565 MKRLRKLMREWGMKKNMGVSSIETNSNIH 593
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 153/644 (23%), Positives = 258/644 (40%), Gaps = 113/644 (17%)
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
A +LF R+ +P+ + SL+ ++ +E + L M +RGI + +L
Sbjct: 63 ARQLFDRIP----DPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLK 118
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
CA + A V HG V+K GF VFV NAL+ Y G + ++ F E+ ++N+VS
Sbjct: 119 ACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVS 178
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
WN++I YA+AG N R EA LF
Sbjct: 179 WNSMINGYAQAG-------------------------------------NTR--EACSLF 199
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
M+ ++A+ T+ LL C+ L G+ +H H++ ++++ N L++MY KC
Sbjct: 200 EGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKC 259
Query: 461 GCLEEGHLV-------------------------------FEQIEKKDLITWNSMISGYG 489
G L H FEQI +K +I+WN+MIS Y
Sbjct: 260 GDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYV 319
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
G AL + M G PD AVLSAC G + G+ I D + F P +
Sbjct: 320 QGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFH-NPGV 378
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH-KNTDVAEAMASQIF 608
+ ++D+ R G + A + MP + N W ++ + MH + D S +F
Sbjct: 379 ALFNSLLDMYARCGQVDTAISLFSEMPSK-NVISWNAIIGALAMHGRAQDALMFFRSMVF 437
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
+++ L +SA G AGQ + + R ++ G
Sbjct: 438 DAFPPDEITFVAL-----------------LSACNHGGLLEAGQYYFQAMRHVYNVKPGV 480
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVP-DNDIILW-EMMGKKNVKRIQRIRADNIKSKHR 726
+ + ++ +LA ++ +P D+++W ++G + +I IK +
Sbjct: 481 EHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIK---Q 537
Query: 727 IVGFRNLKLGLRLLLS--LRSTNG--------QLMKN---KLKLGLVVFNLSLKLFNDAV 773
++ + GL +L+S L T+ +LM+ K +G+ + +
Sbjct: 538 LLELEGMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNSNIHESGA 597
Query: 774 TATNRVISSDIRLENDS-PHGLVLLRGLKVFDNFCNVTDTKQFM 816
S D+ + +D PH LV L V + NV + K +
Sbjct: 598 EGIGHESSDDMYVGDDRLPHHLVFPNALAVPPDQLNVEERKSIL 641
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 201/658 (30%), Positives = 341/658 (51%), Gaps = 88/658 (13%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
+LQ CK I +LKQ H Q+ + G S F+ +++++ + F N+ + A
Sbjct: 8 ILQHCKNIRELKQTHLQIFIHGLQHSDFMLPKLITVSSAF-------NLLDYA------- 53
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
++ AL++Y +M+ L V + FTF +++ + + G+
Sbjct: 54 ---------------THKEALRVYSRMKALMVEANSFTFTFLLKCFETSQALED----GR 94
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQ-MSDSFKLFDKVRVKNYISWNMMFSGFALN 215
++H +L++GF +V + N L+G YA + + ++++F+++ ++ ISWN M S +
Sbjct: 95 VIHGEILKLGFGSSVFVQNSLLGFYANCSENLGSAYRVFEEMPERDVISWNSMISAYMTR 154
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
+ A+ L +M E N VTW S++ ++ G +E +F+ M R EV
Sbjct: 155 GEIQSAIGLLDKMP----ERNIVTWNSVVCGLSKAGNMELAHSVFEQMPLRN-EVSW--- 206
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
N++I Y + GDV+ AQ++F ++ E
Sbjct: 207 -----------------------------------NSMISGYVRIGDVRAAQSIFYQMPE 231
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
K +VSW A+I+ YA G A +F+ M NV+SW+A+I + N ++
Sbjct: 232 KTVVSWTAMISGYATNGDLKSAENIFNH--------MPVKNVVSWNAMISGYVHNHEFDQ 283
Query: 396 ALDLFRKMQL-AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
AL +F M + + + T+ +LS CA +L G+ I+ ++ + ++ +I + N L+
Sbjct: 284 ALCVFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALI 343
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+M+ KCG +E VF + K+ +ITW +M+SG +NG A+ F++M G KPD V
Sbjct: 344 DMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKMCLEGTKPDDV 403
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F+AVLSAC+H GLV EG+R+FD MV+EF I+P++EHY CMVDLLGRAG L+EA
Sbjct: 404 IFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPRIEHYGCMVDLLGRAGKLEEAVRFTAR 463
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
M ++PNA +W TLL C++H N D+ +++ +I L+SN+ A+ GRWED
Sbjct: 464 MHLKPNAVIWATLLFCCKIHGNGDLLKSVTEKIMDQEPSNPSYLTLVSNLSASFGRWEDV 523
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL--ALQMEN 690
R++ + + ++KV G S I+V ++H F + ++ K + L A +ME
Sbjct: 524 LSFRVAMRQQRMEKVPGCSSIQVGNRVHEFLAKDTRHVQRKEIYRALSHYKNATEMET 581
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 179/376 (47%), Gaps = 29/376 (7%)
Query: 30 LLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGR-LFDARNVFET 88
LL CF+ + + + +H +++ G +S F+ +L YA L A VFE
Sbjct: 80 LLKCFE----TSQALEDGRVIHGEILKLGFGSSVFVQNSLLGFYANCSENLGSAYRVFEE 135
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
P + + WNS++ ++ G ++A+ L KM + ++ T+ V+ G+
Sbjct: 136 MP---ERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIV----TWNSVVCGLSKAGNM 188
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
++ H+ QM + V N +I Y ++G + + +F ++ K +SW M
Sbjct: 189 -------ELAHSVFEQMPLRNEVSW-NSMISGYVRIGDVRAAQSIFYQMPEKTVVSWTAM 240
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG- 267
SG+A N D A +F M ++ N V+W +++S + ++ + +F M G
Sbjct: 241 ISGYATNGDLKSAENIFNHMPVK----NVVSWNAMISGYVHNHEFDQALCVFHHMLINGE 296
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
+ +LS CA L + GK I+ ++ K + + NALI ++ K GDV+ A+
Sbjct: 297 CRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAK 356
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+F + ++ I++W +++ A G C EA+ +F ++ L+G +P+ + + AV+ A
Sbjct: 357 EVFHHMSKRCIITWTTMVSGLAVNGKCREAINLFDKM-CLEG---TKPDDVIFIAVLSAC 412
Query: 388 ASNGRGEEALDLFRKM 403
G EE +F +M
Sbjct: 413 THGGLVEEGKRVFDQM 428
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 197/573 (34%), Positives = 322/573 (56%), Gaps = 76/573 (13%)
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
T+ L+I +C S Q VH H+L+ GF + + +LI MY+ + ++ K+
Sbjct: 72 TYELLILSCTHQNSLLD----AQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKV 127
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FDK R + +N +F +L + L +++RM G+ + T+T +L + C
Sbjct: 128 FDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKA---C--- 181
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
V +E +L+ G+ IH +++ G++ YV + L
Sbjct: 182 ----------------VASECFVSLLN---------KGREIHAHILRHGYDGYVHIMTTL 216
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ +Y K G V A +F+++ K
Sbjct: 217 VDMYAKFGCVSNASCVFNQMPVK------------------------------------- 239
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQL--AKVVANSVTISGLLSVCAESAALNIG 431
NV+SWSA+I +A NG+ EAL+LFR++ L + NSVT+ +L CA AAL G
Sbjct: 240 --NVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQG 297
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
R IHG+++R ++ + V + L+ MY +CG LE G VF+Q++K+D+++WNS+IS YG++
Sbjct: 298 RLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVH 357
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G G+ A+ FEEM G +P ++FV+VL ACSHAGLV+EG+ +F+ M I P +EH
Sbjct: 358 GFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEH 417
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
YACMVDLLGRA L+EA+ I++NM +EP VWG+LL SCR+H N ++AE + ++F L
Sbjct: 418 YACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLE 477
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
G+Y+LL++IYA +G W+ +V+ + +GL+KV G+SWIEVKRKI+ F S + +
Sbjct: 478 PTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVN 537
Query: 672 SDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
++ + +L +L+++++ +G VP ++L+++
Sbjct: 538 PRMEQLHALLVKLSMELKEEGYVPQTKVVLYDL 570
Score = 160 bits (404), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 201/391 (51%), Gaps = 58/391 (14%)
Query: 25 TYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
T+ NSLLD ++VH L+ G + FLA +++++Y+ F + +AR
Sbjct: 81 THQNSLLDA--------------QRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARK 126
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
VF+ + ++N++ R G E L +Y +M +G+ D FT+ V++AC
Sbjct: 127 VFDKTR---NRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVA 183
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
F + G+ +H H+L+ G+ G VHI+ L+ MYAK G +S++ +F+++ VKN +S
Sbjct: 184 SECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVS 243
Query: 205 WNMMFSGFALNFDCDGALELFKRMELE--GLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
W+ M + +A N ALELF+ + LE L PN VT S+L + A LE+ +
Sbjct: 244 WSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGY 303
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
+ ++G+ ++I V+S AL+ +Y + G
Sbjct: 304 ILRKGL----DSILPVIS-------------------------------ALVTMYARCGK 328
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
+++ Q +F +++++++VSWN+LI+SY G +A+ +F E++ +E P+ IS+ +
Sbjct: 329 LELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIF---EEMTYNGVE-PSPISFVS 384
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
V+GA + G +E LF M +A + SV
Sbjct: 385 VLGACSHAGLVDEGKMLFNSMHVAHGICPSV 415
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 382/757 (50%), Gaps = 101/757 (13%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFG---RLFDARNVFETAPFDCK 94
L+ CKTI +LK H L G + ++++ G L A+ VFE + +
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS--ESY 96
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
+ ++NS++R S+GL A+ L+++M G+ D +TFP + AC R + +
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSAC---AKSRAKGNG 153
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
QI H +++MG+ ++ + N L+ YA+ G++ + K+FD++ +N +SW M G+A
Sbjct: 154 IQI-HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 215 NFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
A++LF RM E + PN VT ++S+ A+ LE ++ +R GIEV
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY----VFVKNALICVYGKHGDVKVAQNL 329
++ ++ + A + K + F++Y + + NA+ Y + G + A +
Sbjct: 273 MVSALVDMYMKCNAIDVAKRL--------FDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 330 FSEIEE--------------------KNIV---------------SW----NALITSYAE 350
F+ + + +NI+ SW NALI Y +
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
D A +F + M V++W++++ + NG + A + F M +V+
Sbjct: 385 CHRQDTAFRIFDR--------MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Query: 411 NSVTISGLL--------------------------------SVCAESAALNIGREIHGHV 438
+ ISGL+ S C AL++ + I+ ++
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
+ + ++ + L++M+ +CG E +F + +D+ W + I M G E A+
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
F++MIE G KPDGVAFV L+ACSH GLV +G+ IF M++ + P+ HY CMVDL
Sbjct: 557 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 616
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
LGRAGLL+EA ++++MPMEPN +W +LL +CR+ N ++A A +I L E TGSY
Sbjct: 617 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 676
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
+LLSN+YA++GRW D AKVR+S K KGL+K G S I+++ K H F+SG+ ++ N+
Sbjct: 677 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIE 736
Query: 679 EVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQR 715
+L+E++ + + G VPD +L ++ K+ + + R
Sbjct: 737 AMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSR 773
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 192/436 (44%), Gaps = 55/436 (12%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
+T N+ + C + + + ++V+ + +G + + + ++ +Y + + A+
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 84 NVFETAPFDCKSSSL-LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
+F+ + +S+L L N++ V GL AL ++ M GV D + I +C
Sbjct: 292 RLFD----EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ + + G+ H +VL+ GF+ +I N LI MY K + +F++FD++ K
Sbjct: 348 SQLRNILW----GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-D 261
++WN + +G+ N + D A E F+ M E N V+W +++S + EE +++F
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMP----EKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
M + G+ + + S C L A + K I+ ++ K G + V + L+ ++ + G
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 322 DVKVAQNLFSEIEEKNIVSWN-----------------------------------ALIT 346
D + A ++F+ + +++ +W +T
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
+ + GL + E+F + KL G S P + + ++ G EEA+ L M +
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVS---PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 407 KVVANSVTISGLLSVC 422
N V + LL+ C
Sbjct: 637 ---PNDVIWNSLLAAC 649
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 213/701 (30%), Positives = 350/701 (49%), Gaps = 86/701 (12%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
Q+H +I +G + +A ++++Y++ G LFDAR +F+ P ++ ++ WN ++ V
Sbjct: 299 QLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMP---QTDTVTWNGLIAGYV 355
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
NG + A+ L+ M GV D TF + + GS ++ + VH+++++ G
Sbjct: 356 QNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKY----CKEVHSYIVRHGVP 411
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+V++ + L+ +Y K G + + K F + + + M SG+ LN
Sbjct: 412 FDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLN------------- 458
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
G E ++LF + + G+ +A VL CA LA+
Sbjct: 459 ----------------------GLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASL 496
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+GK +H ++K G E+ V +++ +Y K G + +A F + K
Sbjct: 497 KLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVK------------ 544
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+ + W+ +I +F+ NG+ E A+DLFR+M +
Sbjct: 545 ---------------------------DSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGT 577
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+SV++S LS CA AL G+E+H VVR S + V + L++MY KCG L
Sbjct: 578 KFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARS 637
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
VF+ ++ K+ ++WNS+I+ YG +G L F EM+EAG +PD V F+ ++SAC HAGL
Sbjct: 638 VFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGL 697
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
V+EG F M E+ I +MEH+ACMVDL GRAG L EA D +K+MP P+A WG+LL
Sbjct: 698 VDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLL 757
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
+CR+H N ++A+ + + L +G Y+LLSN++A +G WE KVR K KG++K
Sbjct: 758 GACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQK 817
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKK 708
+ G SWI+V HMFS+ + + +L+ L L++ G VP + L
Sbjct: 818 IPGYSWIDVNGGTHMFSAADGCHPQSVEIYLILKNLLLELRKHGYVPQPYLPL-----HP 872
Query: 709 NVKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRSTNGQ 749
+ Q++ K + + N+K+ L+L T G+
Sbjct: 873 QIMNFQKMYCIYFKWRRVLCVLCNMKIPLKLEGKFYWTAGR 913
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 165/609 (27%), Positives = 268/609 (44%), Gaps = 112/609 (18%)
Query: 45 HQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCK---SSSLLWN 101
Q++Q+H +++V G N S L +R+L +Y D N+F C+ SL WN
Sbjct: 93 QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLF------CRLQLCYSLPWN 146
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
++R G ++ AL + +M V D +TFP VI+AC + + ++VH
Sbjct: 147 WLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNV----PLCKMVHEL 202
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
MGF ++ I + LI +Y G + D+ LFD++ V++ I WN+M +G+ N D + A
Sbjct: 203 ARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSA 262
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
L F+ M ++PN V++ L LSV
Sbjct: 263 LGTFQEMRNSCVKPNSVSFVCL-----------------------------------LSV 287
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
CA G +HG VI+ GFE V N +I +Y K G++ A+ +F + + + V+W
Sbjct: 288 CATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTW 347
Query: 342 NALITSYAEAGLCDEAVEVFSQL----EKLD----------------------------- 368
N LI Y + G DEAV +F + KLD
Sbjct: 348 NGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVR 407
Query: 369 -------------------GGSME------RPNVISWSAVIGAFAS----NGRGEEALDL 399
GG +E + N + AV A S NG EAL+L
Sbjct: 408 HGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNL 467
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
FR + +V N +T++ +L CA A+L +G+E+H +++ + V + + MY K
Sbjct: 468 FRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAK 527
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
G L+ + F ++ KD + WN MI + NG E A+ F +M +G K D V+ A
Sbjct: 528 SGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSAT 587
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
LSAC++ + G+ + +VR I + ++D+ + G L A + M +
Sbjct: 588 LSACANYPALYYGKELHCFVVRNSFISDTFVA-STLIDMYSKCGKLALARSVFDMMDWK- 645
Query: 580 NAYVWGTLL 588
N W +++
Sbjct: 646 NEVSWNSII 654
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 114/227 (50%), Gaps = 4/227 (1%)
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
+ W+ +I F+ G + AL F +M + V + T ++ C + + + +H
Sbjct: 143 LPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHEL 202
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
+ + ++ + + L+ +Y G + + +F+++ +D I WN M++GY NG +A
Sbjct: 203 ARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSA 262
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHYACMV 556
L TF+EM + KP+ V+FV +LS C+ G+V G ++ +++R F +P + + ++
Sbjct: 263 LGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVAN--TII 320
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+ + G L +A I MP + + W L+ + TD A A+
Sbjct: 321 TMYSKCGNLFDARKIFDIMP-QTDTVTWNGLIAGYVQNGFTDEAVAL 366
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 189/658 (28%), Positives = 342/658 (51%), Gaps = 56/658 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA------RFGRLFDARNVFETAP 90
LL+QC++I L Q+H L+V G + + +A+++++ Y R G L AR +F+ P
Sbjct: 16 LLRQCRSIQHLDQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARRLFDRIP 75
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ ++N+++R ++ + AL+L+ + + G+L + FT P V++AC + +
Sbjct: 76 ---EPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEH 132
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+ H V+++GF + + N L+ +A G + DS + F ++ +N +S
Sbjct: 133 ALA----AHGVVVKLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVS------ 182
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
W +++ +A+ G + E LF MR +G+
Sbjct: 183 -----------------------------WNTMIGGYAQAGEVSEACALFGEMRHQGLLA 213
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+ +L C+ +G+++H ++ G + NAL+ +YGK GD+ +A F
Sbjct: 214 DVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALLDMYGKCGDLWMAHRCF 273
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+ KN+V+W +++ + A+ G D + F Q M N++SW+A+I +
Sbjct: 274 DMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQ--------MPERNIVSWNAMISCYVQC 325
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
GR E LDL+ +M+ + + T++G+LS C ++ L G+ IH +V + + +
Sbjct: 326 GRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNFNDPGVTLL 385
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
N LL+MY +CG ++ +F ++ K++I+WN +I M+G + + F M+ F
Sbjct: 386 NSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETVTFFRTMVSDAFS 445
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
PD + FV +LSACSH GL+ G F+ M R + +EP++EHY CMVDLLGR G L +A +
Sbjct: 446 PDEITFVGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLGRRGHLAKAVN 505
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
++K+M ++P+ VWG LL +CR+H N ++ + + Q+ L T G ++L+ N++ + +
Sbjct: 506 LIKDMSIKPDVVVWGALLGACRIHGNVEIGKLVIKQLLELEGITGGLFVLICNLFYETNQ 565
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
WED K+R K +G KK G S IEVK IH F + + +++L+ +
Sbjct: 566 WEDMKKLRKLMKEQGTKKDMGVSSIEVKNIIHEFGVEDLRHESTNEIYAAVDQLSYHL 623
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 220/705 (31%), Positives = 358/705 (50%), Gaps = 96/705 (13%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LL C ++ L KQ H+ I G ++ L +L +Y + + A F + +
Sbjct: 378 LLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETE- 436
Query: 94 KSSSLLWNSILRVNVSNGLYEN---ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ +LWN +L V+ GL +N + K++ +M+ G+ + FT+P ++R C + +
Sbjct: 437 --NVVLWNVML---VAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAV-- 489
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H VL+ GFQ NV++ + LI MYAK+G++
Sbjct: 490 --DLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKL----------------------- 524
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
D AL++F+R++ E + V+WT++++ +A+ + E ++LF M+ +GI
Sbjct: 525 --------DHALKIFRRLK----EKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHS 572
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
A +S CA + A + G+ IH A CV G D+ V
Sbjct: 573 DNIGFASAISACAGIQALNQGQQIH----------------AQACVSGYSDDLSVG---- 612
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
NAL++ YA G +A F ++ D ISW+++I FA +
Sbjct: 613 -----------NALVSLYARCGKVRDAYFAFDKIFSKDN--------ISWNSLISGFAQS 653
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
G EEAL LF +M A NS T +S A A + +G++IH +++ + V
Sbjct: 654 GHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVS 713
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
N L+ +Y KCG +++ F ++ +K+ I+WN+M++GY +G G AL+ FE+M + G
Sbjct: 714 NVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVL 773
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
P+ V FV VLSACSH GLV+EG + F M + P+ EHYAC+VDLLGR+GLL A
Sbjct: 774 PNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARR 833
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
V+ MP++P+A V TLL++C +HKN D+ E AS + L + + +Y+LLSN+YA +G+
Sbjct: 834 FVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGK 893
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
W + R K +G+KK G+SWIEV +H F +G+ ++ + E L +L
Sbjct: 894 WGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAE 953
Query: 691 KGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHRIVGFRNLKL 735
G +P + +L + +R Q+ I S+ + F L L
Sbjct: 954 NGYIPQTNSLL------NDAERRQKGPTQIIHSEKLAIAFGLLSL 992
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 151/613 (24%), Positives = 276/613 (45%), Gaps = 106/613 (17%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
H ++++H + I G S F+ ++ +Y + G L A+ VF+ K S+ W ++
Sbjct: 186 FHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQ---KRDSVSWVAM 242
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
L +G E A+ L+ +M GV + F V+ AC + ++ G+ +H VL
Sbjct: 243 LSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKV----GEQLHGLVL 298
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
+ GF ++ N L+ +Y+++G + ++F+ + ++ +S+N + SG + D ALE
Sbjct: 299 KQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALE 358
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
LFK+M L+ L+P+ VT +A +LS C+
Sbjct: 359 LFKKMCLDCLKPDCVT-----------------------------------VASLLSACS 383
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
+ A +GK H + IK G + ++ AL+ +Y K D+K A F E +N+V WN
Sbjct: 384 SVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNV 443
Query: 344 LITSYAEAGLCDEAVEVFS--QLEKLDGGSMERP-------------------------- 375
++ +Y +E+ ++F+ Q+E ++ P
Sbjct: 444 MLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTG 503
Query: 376 ---NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL-------------- 418
NV S +I +A G+ + AL +FR+++ VV+ + I+G
Sbjct: 504 FQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFK 563
Query: 419 -----------------LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+S CA ALN G++IH + ++ V N L+++Y +CG
Sbjct: 564 EMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCG 623
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
+ + + F++I KD I+WNS+ISG+ +G E AL+ F +M +AG + + F +S
Sbjct: 624 KVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVS 683
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
A ++ V G++I M+++ + + E ++ L + G + +A MP E N
Sbjct: 684 AAANVANVKLGKQIHAMIIKTGH-DSETEVSNVLITLYAKCGNIDDAERQFFEMP-EKNE 741
Query: 582 YVWGTLLNSCRMH 594
W +L H
Sbjct: 742 ISWNAMLTGYSQH 754
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 129/556 (23%), Positives = 250/556 (44%), Gaps = 86/556 (15%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
++H +++ G A L R++ +Y FG L A VF+ P S WN +L V
Sbjct: 89 KLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSC---WNKVLHRFV 145
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+ + L L+ +M + V D T+ V+R C G F + +H + G++
Sbjct: 146 AGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGC---GGGDVPFHCVEKIHARTITHGYE 202
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
++ + N LI +Y K G ++ + K+FD ++ ++ +SW
Sbjct: 203 NSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSW----------------------- 239
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
++LS ++ G EE + LF M G+ + VLS C +
Sbjct: 240 ------------VAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFY 287
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+G+ +HG V+K GF +V NAL+ +Y + G+ A+
Sbjct: 288 KVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAE--------------------- 326
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+VF+ +M + + +S++++I + G ++AL+LF+KM L +
Sbjct: 327 ----------QVFN--------AMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCL 368
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+ VT++ LLS C+ AL +G++ H + ++ M+ +I+++ LL++Y+KC ++ H
Sbjct: 369 KPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHE 428
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
F E ++++ WN M+ YG+ + F +M G +P+ + ++L CS
Sbjct: 429 FFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRA 488
Query: 529 VNEGRRIFDMMVRE-FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
V+ G +I +++ F+ + + ++D+ + G L A I + + E + W +
Sbjct: 489 VDLGEQIHTQVLKTGFQFNVYVS--SVLIDMYAKLGKLDHALKIFRRLK-EKDVVSWTAM 545
Query: 588 LNSCRMHKNTDVAEAM 603
+ H+ AEA+
Sbjct: 546 IAGYAQHEK--FAEAL 559
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 221/468 (47%), Gaps = 60/468 (12%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ +L+ C ++ + +Q+H Q++ TG + ++++ ++ +YA+ G+L A +F
Sbjct: 476 YPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLK 535
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + W +++ + + AL L+ +M+ G+ D F I AC + +
Sbjct: 536 ---EKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQAL-- 590
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+ GQ +H G+ ++ + N L+ +YA+ G++ D++ FDK+ K+ ISWN + S
Sbjct: 591 --NQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLIS 648
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
GFA + C+ AL LF +M K G E+
Sbjct: 649 GFAQSGHCEEALSLFSQMS-----------------------------------KAGQEI 673
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+ +S A++A +GK IH +IK G + V N LI +Y K G++ A+ F
Sbjct: 674 NSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQF 733
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
E+ EKN +SWNA++T Y++ G +A+ +F +++L G + PN +++ V+ A +
Sbjct: 734 FEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQL--GVL--PNHVTFVGVLSACSHV 789
Query: 391 GRGEEALDLFRKM-QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
G +E + F+ M ++ +V + ++ + S L+ R V + + + +V
Sbjct: 790 GLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRF---VEEMPIQPDAMV 846
Query: 450 QNGLLNMY-----MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
LL+ + G HL+ ++E KD T+ + + Y + G
Sbjct: 847 CRTLLSACIVHKNIDIGEFAASHLL--ELEPKDSATYVLLSNMYAVTG 892
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 107/263 (40%), Gaps = 49/263 (18%)
Query: 389 SNGRGE-EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
SN GE ++ M+ V ANS T LL C S + G ++HG ++++ +
Sbjct: 44 SNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEV 103
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
++ L+++Y+ G L+ VF+++ + L WN ++ + + L F M++
Sbjct: 104 VLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQE 163
Query: 508 GFKPDGVAFVAVLSACS------------HA------------------------GLVNE 531
KPD + VL C HA G +N
Sbjct: 164 KVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNS 223
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTLL 588
+++FD + + + + M+ L ++G +EA + M P Y++ ++L
Sbjct: 224 AKKVFDGLQKRDSVS-----WVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVL 278
Query: 589 NSCRMHKNTDVAEAMASQIFGLI 611
++C + V E Q+ GL+
Sbjct: 279 SACTKVEFYKVGE----QLHGLV 297
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 195/602 (32%), Positives = 329/602 (54%), Gaps = 22/602 (3%)
Query: 75 RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFT 134
++GR+ ++ FE PF + + W + + V NGL ALKL+ ++ + GV + T
Sbjct: 130 KYGRVEESMWYFERNPFQ---NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVT 186
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
F V+RAC +G F G + V++ GF+ + + N LI + +MG++ + ++F
Sbjct: 187 FTSVVRACGELGDF----GLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVF 242
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
D++ ++ +SW + + D A +F M E N ++W+++++ +++ G E
Sbjct: 243 DRMEKRDVVSWTAILDAYVETGDLREARRIFDEMP----ERNEISWSAMIARYSQSGYAE 298
Query: 255 ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
E + LF M + G + A LS A L A G IHG V K G + VF+ ++LI
Sbjct: 299 EALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLI 358
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
+Y K G + +F I EKN+V WN+++ Y+ G +E E+F + +
Sbjct: 359 DLYCKCGKPDDGRLVFDLILEKNVVCWNSMVGGYSINGRLEEXEELFELIPE-------- 410
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
N SW +J + N + E+ L++F + ++ N T S +L CA A+L+ G +
Sbjct: 411 KNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNV 470
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
HG ++++ + +I V L +MY KCG + VFE++ +K+ I+W MI G +G
Sbjct: 471 HGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGLAESGFA 530
Query: 495 ENALATFEEMIEAG-FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
+L FEEM P+ + ++VL ACSH GLV++G F+ M + + I+P+ +HY
Sbjct: 531 VESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYT 590
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
C+VDLL R+G L EA + ++ +P +P A W LL+ C+ +K+ +AE A +++ L
Sbjct: 591 CVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAEN 650
Query: 614 TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSS--GNSLQ 671
+ Y+LLSNIYA++GRW D + +R + KGLKK G SW+EV+ ++H F S G+ Q
Sbjct: 651 NSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQVHSFYSEDGSHSQ 710
Query: 672 SD 673
SD
Sbjct: 711 SD 712
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 223/455 (49%), Gaps = 46/455 (10%)
Query: 167 FQGNVHIV-NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
F G+ +V N +I Y + G + + LFD++ +N +SW+ + SG + ++ F
Sbjct: 82 FDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYF 141
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
+R + N V+WT+ +S R G E + LF + + G+ V+ C +L
Sbjct: 142 ERNPFQ----NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGEL 197
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+G I G V+K GFE Y+ V N+LI + + G++ +A+ +F +E++++VSW A++
Sbjct: 198 GDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAIL 257
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+Y E G EA +F + M N ISWSA+I ++ +G EEAL LF KM
Sbjct: 258 DAYVETGDLREARRIFDE--------MPERNEISWSAMIARYSQSGYAEEALKLFSKMVQ 309
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
N + LS A AL+ G IHGHV ++ ++K++ + + L+++Y KCG ++
Sbjct: 310 EGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDD 369
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLG------------------------------- 494
G LVF+ I +K+++ WNSM+ GY +NG
Sbjct: 370 GRLVFDLILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQC 429
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
E L F ++ +G P+ F +VL AC+ +++G + +++ I+ +
Sbjct: 430 EKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIK-LGIQYDIFVGTA 488
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ D+ + G + + + + MP E N W ++
Sbjct: 489 LTDMYAKCGDIGSSKQVFERMP-EKNEISWTVMIQ 522
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 155/311 (49%), Gaps = 26/311 (8%)
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V N +I Y + G++ A+ LF E+ E+N VSW+ALI+ + G +E++ F +
Sbjct: 89 VSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFER----- 143
Query: 369 GGSMERP--NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
P NV+SW+A I F NG EAL LF ++ + V N VT + ++ C E
Sbjct: 144 -----NPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELG 198
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
+G I G VV+ + V N L+ + ++ G ++ VF+++EK+D+++W +++
Sbjct: 199 DFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILD 258
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
Y G A F+EM E + +++ A+++ S +G E ++F MV+E +
Sbjct: 259 AYVETGDLREARRIFDEMPER----NEISWSAMIARYSQSGYAEEALKLFSKMVQE-GFK 313
Query: 547 PQMEHYACMVDLLGRAGLLQEASDI---VKNMPMEPNAYVWGTLLN-SCRMHKNTDVAEA 602
P + +AC + L L +I V + ++ + ++ +L++ C+ K D
Sbjct: 314 PNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDD---- 369
Query: 603 MASQIFGLITE 613
+F LI E
Sbjct: 370 -GRLVFDLILE 379
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 111/236 (47%), Gaps = 16/236 (6%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSM-NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
++S C SA + G + ++ M +N + + L++ MK G +EE FE+ +
Sbjct: 88 VVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFERNPFQ 147
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
++++W + ISG+ NGL AL F ++E+G +P+ V F +V+ AC G G I
Sbjct: 148 NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGLGMSIL 207
Query: 537 DMMVREFRIEPQMEHYA----CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
++V+ EHY ++ L R G + A + M + + W +L++
Sbjct: 208 GLVVK-----AGFEHYLSVSNSLITLSLRMGEIDLARRVFDRME-KRDVVSWTAILDA-- 259
Query: 593 MHKNTDVAEAMASQIFGLITETTG-SYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
+ D+ E A +IF + E S+ + Y+ SG E+A K+ +G K
Sbjct: 260 YVETGDLRE--ARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFK 313
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
A + T LL + + G +H H+++ + + LL +Y+ C E +
Sbjct: 19 AYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQI 78
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
++ + DL+ N MIS Y G A F+EM E + V++ A++S G V
Sbjct: 79 VKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPER----NEVSWSALISGLMKYGRV 134
Query: 530 NEGRRIFD 537
E F+
Sbjct: 135 EESMWYFE 142
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 204/691 (29%), Positives = 345/691 (49%), Gaps = 88/691 (12%)
Query: 15 SNPSRP-FSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIY 73
+NPS P FS L+ ++L +QLK +H +L+ + +L +L
Sbjct: 5 TNPSSPVFS------KALEIKNYLSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCA 58
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
FG ++ VF + + LWN+++R VS +++A+ LY MR G L + F
Sbjct: 59 LDFGSTNYSKLVFSQVK---EPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNF 115
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
T P V++AC + + G +H+ +++ G+ +V + L+ +Y K D+ K+
Sbjct: 116 TIPFVLKAC----ARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKV 171
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FD + KN +S WT++++ + G
Sbjct: 172 FDDIPDKNVVS-----------------------------------WTAIITGYISSGHF 196
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
E + F + + G++ + ++ VL+ CA L G+ I ++ G VFV +L
Sbjct: 197 REAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSL 256
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ +Y K G+++ A +FS + EK+
Sbjct: 257 LDMYVKCGNLERANLIFSAMPEKD------------------------------------ 280
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
++SWS +I +A NG ++ALDLF +MQ + + T+ G+LS CA AL++G
Sbjct: 281 ---IVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIW 337
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+ R N ++ L++MY KCG + + +F ++KKD + WN+M+ G MNG
Sbjct: 338 ASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGH 397
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
+ + F + + G +PD F+ +L C+H G VNEGR+ F+ M R F + P +EHY
Sbjct: 398 AKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYG 457
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
CMVDLLGRAGLL EA ++ NMPM+PNA VWG LL C++HK+T +AE + ++ L
Sbjct: 458 CMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPW 517
Query: 614 TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSD 673
+G+Y+ LSNIY+ + RWE+A K+R + K + ++K+ SWIE+ +H F G+
Sbjct: 518 NSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKSHWL 577
Query: 674 LKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ + L+EL +++ G VP + +L+++
Sbjct: 578 SEKIYAKLDELGRELKAVGHVPTTEFVLFDI 608
>gi|357478575|ref|XP_003609573.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510628|gb|AES91770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 665
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/623 (31%), Positives = 326/623 (52%), Gaps = 28/623 (4%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG-VLGDG 132
AR GR+ AR +F+ P + ++ WN++L GLY+ L+ MR++ D
Sbjct: 16 ARSGRICHARKLFDEMP---ERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPDN 72
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
F++ I +C RF G +H+ V+ G+Q ++ + N LI MY K +D+ K
Sbjct: 73 FSYSAAINSCAGASDIRF----GTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARK 128
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+FD++ N ++W + +A D A E+F+ M E +E + W ++++HARCG
Sbjct: 129 VFDEMNYSNEVTWCSLLFAYANTCRFDMAFEIFRSMP-EKVE---IAWNIIIAAHARCGE 184
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
+E + LF M + + + ++S C + G ++H FVIK G+ + V N+
Sbjct: 185 VEACLHLFKEMCENLYQPDQWTFSALMSACTESMESLHGCMMHCFVIKSGWSTAMEVNNS 244
Query: 313 LICVYGK---HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
++ Y K HGD A +F+ N VSWNA+I ++ + G +A+ F Q +
Sbjct: 245 IVSFYAKLECHGD---AVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPE--- 298
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
N++SW+++I + NG G+ AL LF M+ + + +L CA A L
Sbjct: 299 -----KNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHACASLAILV 353
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
G+ +H ++ + ++K + V N L+NMY KCG +E L I KDL++WNSM+ +G
Sbjct: 354 HGKMVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSKLALRGINDKDLVSWNSMLFAFG 413
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
+NG G A+ F EM+ +G +PD V F +L CSH GL++EG F M E+ + M
Sbjct: 414 LNGRGNEAICMFREMVASGVRPDEVTFTGLLMTCSHLGLIDEGFAFFQSMSLEYGLVQGM 473
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV--WGTLLNSCRMHKNTDVAEAMASQI 607
+H ACMVD+LGR G + EA + + LL +C H + ++ +
Sbjct: 474 DHVACMVDMLGRGGYVAEAQSLARKYSKTSRDKTNSCEVLLGACHAHGDLGTGSSVGEYV 533
Query: 608 FGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG 667
L + Y+LLSN+Y ASG+W++A VR +G+KKV G SWIE++ + F SG
Sbjct: 534 KNLEPKKEVGYVLLSNMYCASGKWKEAEMVRKEMMDQGVKKVPGCSWIEIRNVVTAFVSG 593
Query: 668 NSLQSDLKNVCEVLEELALQMEN 690
N+L + ++ ++L L L+M +
Sbjct: 594 NNLYPCMADISKILYFLELEMRH 616
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 183/386 (47%), Gaps = 42/386 (10%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE-------------------TA 89
++H+ ++V+G +S +A ++ +Y + DAR VF+ T
Sbjct: 93 KLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNYSNEVTWCSLLFAYANTC 152
Query: 90 PFDC---------KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR 140
FD + + WN I+ + G E L L+ +M + D +TF ++
Sbjct: 153 RFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCENLYQPDQWTFSALMS 212
Query: 141 AC-KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV 199
AC + M S G ++H V++ G+ + + N ++ YAK+ D+ K+F+
Sbjct: 213 ACTESMESLH-----GCMMHCFVIKSGWSTAMEVNNSIVSFYAKLECHGDAVKVFNSGGA 267
Query: 200 KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDL 259
N +SWN + D AL F+ + E N V+WTS++ + R G + + L
Sbjct: 268 FNQVSWNAIIDAHMKVGDTQKALLAFQ----QAPEKNIVSWTSMIVGYTRNGNGDLALSL 323
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
F M++ ++ VL CA LA GK++H +I G + Y+FV N+LI +Y K
Sbjct: 324 FLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCIIHLGLDKYLFVGNSLINMYAK 383
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
GD++ ++ I +K++VSWN+++ ++ G +EA+ +F ++ S RP+ ++
Sbjct: 384 CGDIEGSKLALRGINDKDLVSWNSMLFAFGLNGRGNEAICMFREMV----ASGVRPDEVT 439
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQL 405
++ ++ + G +E F+ M L
Sbjct: 440 FTGLLMTCSHLGLIDEGFAFFQSMSL 465
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 203/660 (30%), Positives = 324/660 (49%), Gaps = 60/660 (9%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
D L +C + L Q+H Q + +G A AF A+R++ LF PF
Sbjct: 7 LDAHLARCSSARHLLQIHAQFVASGLLADAFAASRLI--------LFTTSTRLLPLPFHH 58
Query: 94 ---------KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
+ ++ N +L+ +GL L LY M D +T ++ AC
Sbjct: 59 SLRLLHVVHRPNAFSCNMVLKAAREHGLPHLCLPLYASM---SAAPDCYTHTILAAAC-- 113
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
+ R G+ VH H ++ GF N+++ N L+ MY+ G + D+ K+FD V + +S
Sbjct: 114 --ATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVS 171
Query: 205 WNMMFSGFALNFDCDGALELFKRME--------------------------LEGLE-PNF 237
WN + + + D D A+ +F RM +G+E +
Sbjct: 172 WNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDGVERKDV 231
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
TWT+++S R G+ E + LF MR G V + V++ CA L G++ HG
Sbjct: 232 FTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGL 291
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
+ G + V+NALI +Y +V A+ LF + + SWN++I Y + G +A
Sbjct: 292 AFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDA 351
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
E+F+ + D +SW+ +I N + EAL +F MQ + + VT+
Sbjct: 352 KELFTVMPDKDN--------VSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVS 403
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
++S C ++L G+ +H ++ +++ L++MYMKCGCLE VF+ +E++
Sbjct: 404 VISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERG 463
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGF-KPDGVAFVAVLSACSHAGLVNEGRRIF 536
WN++I G MNGL +L F EM + P+ + F VLSAC HAGLV EG+ F
Sbjct: 464 TPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFF 523
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
+M ++ I P + HY CMVDLLGRAG ++EA +++++MPM P+ WG LL SC H +
Sbjct: 524 KLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHGD 583
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
+V E + ++ L G + +LSNIYA+ G W+ +R S K + K+ G S +E
Sbjct: 584 NEVGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQWHVPKIPGSSVVE 643
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 205/691 (29%), Positives = 351/691 (50%), Gaps = 99/691 (14%)
Query: 14 PSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVL 70
P N + PF I + C+ + L+ +H+ + G + F+ A ++
Sbjct: 28 PDNYTLPFVI---------------RACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALV 72
Query: 71 SIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG 130
+Y + + DAR +F+ + + W ++ G +L L+ KMR+ GV+
Sbjct: 73 DMYVKCREIEDARFLFDKMQ---ERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVP 129
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
D V+ AC +G+ +I+ +++ + FQ +V + +I MYAK G +
Sbjct: 130 DKVAMVTVVFACAKLGAMHK----ARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCV--- 182
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
+ A E+F RME E N ++W+++++++
Sbjct: 183 ----------------------------ESAREIFDRME----EKNVISWSAMIAAYGYH 210
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
G+ + +DLF MM G+ +A +L C+DL MG++IH V K G + FV
Sbjct: 211 GQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVC 270
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
AL+ +YGK +++ A+ LF ++ E+++V+
Sbjct: 271 AALVDMYGKCREIEDARFLFDKMPERDLVT------------------------------ 300
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
W+ +IG +A G E+L LF KM+ VV + V + ++ CA+ A++
Sbjct: 301 ---------WTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHK 351
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
R I ++ R ++++ +++M+ KCGC+E +F+++E+K++I+W++MI+ YG
Sbjct: 352 ARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGY 411
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
+G G AL F M+ +G P+ + V++L ACSHAGLV EG R F +M ++ + ++
Sbjct: 412 HGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVK 471
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL 610
HY C+VDLLGRAG L EA ++++M +E + +WG L +CR HK+ +AE A+ + L
Sbjct: 472 HYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLEL 531
Query: 611 ITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSL 670
+ G Y+LLSNIYA +GRWED AK R + LKK+ G +WIEV K H FS G++
Sbjct: 532 QPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTT 591
Query: 671 QSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
K + E+L+ L ++E G VPD + +L
Sbjct: 592 HPRSKEIYEMLKSLGNKLELVGYVPDTNFVL 622
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 126/251 (50%), Gaps = 13/251 (5%)
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS 442
++G FA G FR++ ++ T+ ++ C + L +GR IH V +
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFE 502
++ + V L++MY+KC +E+ +F++++++DL+TW MI GY G +L FE
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 503 EMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR-EFRIEPQMEHYACMVDLLGR 561
+M E G PD VA V V+ AC+ G +++ R I D + R +F+++ + M+D+ +
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG--TAMIDMYAK 178
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH----KNTDVAEAMASQIFGLITETTGS 617
G ++ A +I M E N W ++ + H K D+ M S G++ +
Sbjct: 179 CGCVESAREIFDRME-EKNVISWSAMIAAYGYHGQGRKALDLFRMMLSS--GMLPDKI-- 233
Query: 618 YMLLSNIYAAS 628
L S +YA S
Sbjct: 234 -TLASLLYACS 243
>gi|108862877|gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 185/566 (32%), Positives = 299/566 (52%), Gaps = 88/566 (15%)
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
D FT+ +I+A G R VH+HV+++G + + N LI Y+K G SD+
Sbjct: 5 DSFTYSFLIKALSAAGVAPVR-----AVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDA 59
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
K+FD++ E + V+W + +++ R
Sbjct: 60 RKVFDEMP-----------------------------------ERDVVSWNTAMAAMVRE 84
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
G L LFD M ++
Sbjct: 85 GELAGVRKLFDEMPEKD---------------------------------------TVSW 105
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
N ++ Y K G+V+ A LF + E+N+VSW+ +++ Y + G + A +F +
Sbjct: 106 NTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDK------- 158
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
M N+++W+ ++ A A G +EA LF +M+ A V + + +L+ CAES +L++
Sbjct: 159 -MPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSL 217
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE-QIEKKDLITWNSMISGYG 489
G+ IH +V + ++ ++ V N L++M+ KCGC+ VF+ + +KD ++WNS+I G+
Sbjct: 218 GKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFA 277
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
M+G G+ AL F +M + GF PD V + VLSAC+H G V+EGRR F M R++ I PQ+
Sbjct: 278 MHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQI 337
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
EHY CM+DLLGR GL++EA D++K+MP EPN +WG+LL++CR+HKN + AE +++
Sbjct: 338 EHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAEIAVNELSK 397
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
L G+Y +LSNIYA +G+W D AK R+ K G +K AG SW+E+ H F+ G+
Sbjct: 398 LQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAGSSWVELNETFHEFTVGDR 457
Query: 670 LQSDLKNVCEVLEELALQMENKGCVP 695
D + E+++ L+ +++ GCVP
Sbjct: 458 KHQDSDQISEMVDRLSSHVKHVGCVP 483
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 179/412 (43%), Gaps = 86/412 (20%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
+ ++ VH+ ++ G+ F+ ++ Y++ G DAR VF+ P + + WN+
Sbjct: 21 VAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMP---ERDVVSWNTA 77
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
+ V G KL+ +M + +
Sbjct: 78 MAAMVREGELAGVRKLFDEMPEKDTVS--------------------------------- 104
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
N ++ Y K G++ +F+LF ++ +N +SW+ M SG+ D + A
Sbjct: 105 ----------WNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCKKGDLEMARV 154
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
+F +M N VTWT ++S+ A+ G ++E LF M++ +E+ A+ +L+ CA
Sbjct: 155 IFDKMP----SKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVELDVAAVVSILAACA 210
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF-SEIEEKNIVSWN 342
+ + +GK IH +V K V NALI ++ K G V A +F +E +K+ VSWN
Sbjct: 211 ESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWN 270
Query: 343 ALITSYAEAGLCDEAVEVFSQLEK----------------------LDGG-----SMER- 374
++I +A G D+A+E+F+Q+++ +D G +MER
Sbjct: 271 SIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERD 330
Query: 375 ----PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
P + + +I G +EA+DL + M N V LLS C
Sbjct: 331 YGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWE---PNEVIWGSLLSAC 379
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 200/665 (30%), Positives = 339/665 (50%), Gaps = 108/665 (16%)
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
+L WN ++ +G + ++ L+ KM GV D +TF V ++ + S G+
Sbjct: 9 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH----GGE 64
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H +L+ GF + N L+ Y K ++ + K+FD++ ++ ISWN + +G+ N
Sbjct: 65 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 124
Query: 217 DCDGALELFKRMELEGLEPNFVTWTS---------------------------------- 242
+ L +F +M + G+E + T S
Sbjct: 125 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 184
Query: 243 -LLSSHARCGRLE-------------------------------ETMDLFDMMRKRGIEV 270
LL +++CG L+ E + LF+ M + GI
Sbjct: 185 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 244
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+ VL+ CA GK +H ++ + +FV NAL+ +Y K G ++ A+ +F
Sbjct: 245 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 304
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
SE+ K+I+SWN +I Y++ +EA+ +F+ L
Sbjct: 305 SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL-------------------------- 338
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
++ + + T++ +L CA +A + GREIHG+++R + V
Sbjct: 339 ------------LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA 386
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
N L++MY KCG L H++F+ I KDL++W MI+GYGM+G G+ A+A F +M +AG +
Sbjct: 387 NSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE 446
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
D ++FV++L ACSH+GLV+EG R F++M E +IEP +EHYAC+VD+L R G L +A
Sbjct: 447 ADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYR 506
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
++NMP+ P+A +WG LL CR+H + +AE +A ++F L E TG Y+L++NIYA + +
Sbjct: 507 FIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEK 566
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
WE ++R +GL+K G SWIE+K ++++F +G+S + +N+ L ++ +M
Sbjct: 567 WEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIE 626
Query: 691 KGCVP 695
+G P
Sbjct: 627 EGYSP 631
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 195/450 (43%), Gaps = 78/450 (17%)
Query: 22 SIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFD 81
S + ++ C +++H +Q+H ++ +G + +++ Y + R+
Sbjct: 38 SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDS 97
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
AR VF+ + + WNSI+ VSNGL E L ++V+M G+ D T V
Sbjct: 98 ARKVFDEMT---ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 154
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C R S G+ VH+ ++ F N L+ MY+K G + + +F ++ ++
Sbjct: 155 C---ADSRL-ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 210
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS--------------- 246
+S+ M +G+A A++LF+ ME EG+ P+ T T++L+
Sbjct: 211 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 270
Query: 247 --------------------HARCGRLEETMDLFDMMRKRGI------------------ 268
+A+CG ++E +F MR + I
Sbjct: 271 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 330
Query: 269 --------------EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
+A VL CA L+A G+ IHG++++ G+ V N+L+
Sbjct: 331 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 390
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
+Y K G + +A LF +I K++VSW +I Y G EA+ +F+Q+ + +E
Sbjct: 391 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ---AGIE- 446
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+ IS+ +++ A + +G +E F M+
Sbjct: 447 ADEISFVSLLYACSHSGLVDEGWRFFNIMR 476
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 194/433 (44%), Gaps = 46/433 (10%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
+ + + K+VH + F++ ++ +YA+ G + +A VF + WN
Sbjct: 260 RLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV---KDIISWN 316
Query: 102 SILRVNVSNGLYENALKLY-VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
+I+ N AL L+ + + + D T V+ AC + +F G+ +H
Sbjct: 317 TIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF----DKGREIHG 372
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
++++ G+ + H+ N L+ MYAK G + + LFD + K+ +SW +M +G+ ++
Sbjct: 373 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 432
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVL 279
A+ LF +M G+E + +++ SLL + + G ++E F++MR IE E A ++
Sbjct: 433 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 492
Query: 280 SVCADLAADHMGKVI--HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS---EIE 334
+ A G +I + F+ + AL+C H DVK+A+ + E+E
Sbjct: 493 DMLA-----RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELE 547
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV-ISWSAVIG------AF 387
+N + + YAEA E E +L K G R N SW + G A
Sbjct: 548 PENTGYYVLMANIYAEA----EKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAG 603
Query: 388 ASNGRGEEALDLFRKMQLAKVVA---NSVTISGLL---------SVCAESA----ALNIG 431
S+ E ++ F + A+++ + +T L+ ++C S AL I
Sbjct: 604 DSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGII 663
Query: 432 REIHGHVVRVSMN 444
HG ++RV+ N
Sbjct: 664 SSGHGKIIRVTKN 676
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 207/696 (29%), Positives = 362/696 (52%), Gaps = 92/696 (13%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H+ ++ G +++AF+ A +++ Y+ G + AR VFE CK ++W I+ V
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEG--ILCKDI-VVWAGIVSCYVE 224
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
NG +E++LKL MR G + + +TF ++A +G+F F + VH +L+ +
Sbjct: 225 NGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF----DFAKGVHGQILKTCYVL 280
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
+ + L+ +Y ++G MSD+FK+F+++ + + W+ M + F N C+
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN---------- 330
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
E +DLF MR+ + ++ +L+ CA
Sbjct: 331 -------------------------EAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG 365
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+G+ +HG V+K GF+ ++V NALI V YA
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDV-------------------------------YA 394
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+ D AV++F++L N +SW+ VI + + G G +A +FR+ +V
Sbjct: 395 KCEKMDTAVKLFAELSS--------KNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVS 446
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
VT S L CA A++++G ++HG ++ + K + V N L++MY KCG ++ V
Sbjct: 447 VTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSV 506
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F ++E D+ +WN++ISGY +GLG AL + M + KP+G+ F+ VLS CS+AGL+
Sbjct: 507 FNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLI 566
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
++G+ F+ M+R+ IEP +EHY CMV LLGR+G L +A +++ +P EP+ +W +L+
Sbjct: 567 DQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLS 626
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
+ N + A A +I + + +Y+L+SN+YA + +W + A +R S K G+KK
Sbjct: 627 ASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKE 686
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKN 709
G SWIE + +H FS G S D+K + +LE L ++ G VPD + +L +M ++
Sbjct: 687 PGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEK 746
Query: 710 VKRIQRIRADNI----------KSKHRIVGFRNLKL 735
KR+ + ++ + S++RI+ +NL++
Sbjct: 747 DKRLW-VHSERLALAYGLVRMPSSRNRILIMKNLRI 781
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 151/385 (39%), Gaps = 85/385 (22%)
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
K IH ++K G +F N L+ Y K G K A NLF E+ E+N VS+ L YA
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA- 126
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
C + + ++S+L + G P+V + L LF + A++
Sbjct: 127 ---CQDPIGLYSRLHR--EGHELNPHVFT---------------SFLKLFVSLDKAEICP 166
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
+H +V++ + N V L+N Y CG ++ VF
Sbjct: 167 ----------------------WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVF 204
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
E I KD++ W ++S Y NG E++L M AGF P+ F L A G +
Sbjct: 205 EGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFD 264
Query: 531 EGRRIFDMMVRE-------------------------FRIEPQMEH-----YACMVDLLG 560
+ + +++ F++ +M ++ M+
Sbjct: 265 FAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFC 324
Query: 561 RAGLLQEASDIVKNMP---MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
+ G EA D+ M + PN + ++LN C + K + + E Q+ GL+ +
Sbjct: 325 QNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE----QLHGLVVKVGFD 380
Query: 618 YML-----LSNIYAASGRWEDAAKV 637
+ L ++YA + + A K+
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKL 405
>gi|222617355|gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 191/593 (32%), Positives = 307/593 (51%), Gaps = 92/593 (15%)
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
G +AL + M + D FT+ +I+A G R VH+HV+++G
Sbjct: 418 GGAPRDALAAFSAMPRR----DSFTYSFLIKALSAAGVAPVR-----AVHSHVVKLGSVE 468
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
+ + N LI Y+K G SD+ K+FD++
Sbjct: 469 DTFVGNALIDAYSKNGGFSDARKVFDEM-------------------------------- 496
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
E + V+W + +++ R G L LFD M
Sbjct: 497 ---PERDVVSWNTAMAAMVREGELAGVRKLFDEMP------------------------- 528
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
E N ++ Y K G+V+ A LF + E+N+VSW+ +++ Y
Sbjct: 529 --------------EKDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYC 574
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+ G + A +F + M N+++W+ ++ A A G +EA LF +M+ A V
Sbjct: 575 KKGDLEMARVIFDK--------MPSKNLVTWTIMVSACAQKGLVDEAGKLFAQMKEASVE 626
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
+ + +L+ CAES +L++G+ IH +V + ++ ++ V N L++M+ KCGC+ V
Sbjct: 627 LDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYV 686
Query: 470 FE-QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
F+ + +KD ++WNS+I G+ M+G G+ AL F +M + GF PD V + VLSAC+H G
Sbjct: 687 FDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGF 746
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
V+EGRR F M R++ I PQ+EHY CM+DLLGR GL++EA D++K+MP EPN +WG+LL
Sbjct: 747 VDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLL 806
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
++CR+HKN + AE +++ L G+Y +LSNIYA +G+W D AK R+ K G +K
Sbjct: 807 SACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQK 866
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
AG SW+E+ H F+ G+ D + E+++ L+ +++ GCVP +L
Sbjct: 867 TAGSSWVELNETFHEFTVGDRKHQDSDQISEMVDRLSSHVKHVGCVPAGHELL 919
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 191/443 (43%), Gaps = 86/443 (19%)
Query: 13 SPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSI 72
+P + FS + +S F + ++ VH+ ++ G+ F+ ++
Sbjct: 420 APRDALAAFSAMPRRDSFTYSFLIKALSAAGVAPVRAVHSHVVKLGSVEDTFVGNALIDA 479
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y++ G DAR VF+ P + + WN+ + V G KL+ +M + D
Sbjct: 480 YSKNGGFSDARKVFDEMP---ERDVVSWNTAMAAMVREGELAGVRKLFDEMPEK----DT 532
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
++ N ++ Y K G++ +F+
Sbjct: 533 VSW---------------------------------------NTILDGYTKAGEVEAAFE 553
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
LF ++ +N +SW+ M SG+ D + A +F +M + N VTWT ++S+ A+ G
Sbjct: 554 LFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPSK----NLVTWTIMVSACAQKGL 609
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
++E LF M++ +E+ A+ +L+ CA+ + +GK IH +V K V NA
Sbjct: 610 VDEAGKLFAQMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNA 669
Query: 313 LICVYGKHGDVKVAQNLF-SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK----- 366
LI ++ K G V A +F +E +K+ VSWN++I +A G D+A+E+F+Q+++
Sbjct: 670 LIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNP 729
Query: 367 -----------------LDGG-----SMER-----PNVISWSAVIGAFASNGRGEEALDL 399
+D G +MER P + + +I G +EA+DL
Sbjct: 730 DAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDL 789
Query: 400 FRKMQLAKVVANSVTISGLLSVC 422
+ M N V LLS C
Sbjct: 790 IKSMPWEP---NEVIWGSLLSAC 809
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 202/660 (30%), Positives = 321/660 (48%), Gaps = 60/660 (9%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
D L +C + L Q+H Q + +G A AF A+R++ LF PF
Sbjct: 7 LDAHLARCSSARHLLQIHAQFVASGLLADAFAASRLI--------LFTTSTRLLPLPFHH 58
Query: 94 ---------KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
+ ++ N +L+ +GL L LY M D +T ++ AC
Sbjct: 59 SLRLLHVVHRPNAFSCNMVLKAAREHGLPHLCLPLYASM---SAAPDCYTHTILAAAC-- 113
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
+ R G+ VH H ++ GF N+++ N L+ MY+ G + D+ K+FD V + +S
Sbjct: 114 --ATRRAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVWDAVS 171
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGL---------------------------EPNF 237
WN + + + D D A+ +F RM G +
Sbjct: 172 WNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDVVERKDV 231
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
TWT+++S R G+ E + LF MR G V + V++ CA L G++ HG
Sbjct: 232 FTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEMCHGL 291
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
+ G + V+NALI +Y +V A+ LF + + SWN++I Y + G +A
Sbjct: 292 AFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGSVKDA 351
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
E+F+ + D +SW+ +I N + EAL +F MQ + + VT+
Sbjct: 352 KELFTVMPDKDN--------VSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVS 403
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
++S C ++L G+ +H ++ +++ L++MYMKCGCLE VF+ +E++
Sbjct: 404 VISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERG 463
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGF-KPDGVAFVAVLSACSHAGLVNEGRRIF 536
WN++I G MNGL +L F EM + P+ + F VLSAC HAGLV EG+ F
Sbjct: 464 TPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFF 523
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
+M ++ I P + HY CMVDLLGRAG ++EA +++++MPM P+ WG LL SC H +
Sbjct: 524 KLMQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHGD 583
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
+V E + ++ L G + +LSNIYA+ G W+ +R S K + K+ G S +E
Sbjct: 584 NEVGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQWHVPKIPGSSVVE 643
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 203/694 (29%), Positives = 347/694 (50%), Gaps = 93/694 (13%)
Query: 13 SPSNP--SRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVL 70
SP++P S+ I Y ++ L+ F+ QLK +H +L+ + +L +L
Sbjct: 6 SPTSPVFSKALEIKNYLSNGLNFFN----------QLKHIHARLLRLHLDQDNYLLNLIL 55
Query: 71 SIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG 130
FG ++ VF + + LWN+++R VS +++A+ LY MR G L
Sbjct: 56 CCALDFGSTNYSKLVFSQVK---EPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLP 112
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
+ FT P V++AC + + G +H+ +++ G+ +V + L+ +Y K D+
Sbjct: 113 NNFTIPFVLKAC----ARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDA 168
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
K+FD + KN +S WT++++ +
Sbjct: 169 LKVFDDIPDKNVVS-----------------------------------WTAIITGYISS 193
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
G E + F + + G++ + ++ VL+ CA L G+ I ++ G VFV
Sbjct: 194 GHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVA 253
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
+L+ +Y K G+++ A +FS + EK+
Sbjct: 254 TSLLDMYVKCGNLERANLIFSAMPEKD--------------------------------- 280
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
++SWS +I +A NG ++ALDLF +MQ + + T+ G+LS CA AL++
Sbjct: 281 ------IVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDL 334
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
G + R N ++ L++MY KCG + + +F +++KD + WN+M+ G M
Sbjct: 335 GIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSM 394
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
NG + + F + + G +PD F+ +L C+H G VNEGR+ F+ M R F + P +E
Sbjct: 395 NGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIE 454
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL 610
HY CMVDLLGRAGLL EA ++ NMPM+PNA VWG LL C++HK+T +AE + ++ L
Sbjct: 455 HYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIEL 514
Query: 611 ITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSL 670
+G+Y+ LSNIY+ + RWE+A K+R + K + ++K+ SWIE+ +H F G+
Sbjct: 515 EPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLVGDKS 574
Query: 671 QSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ + L+EL +++ G VP + +L+++
Sbjct: 575 HWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDI 608
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 207/716 (28%), Positives = 356/716 (49%), Gaps = 116/716 (16%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+QVH Q + G + ++ +Y + + D R VF+ + + + W S+L
Sbjct: 113 RQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMG---ERNVVSWTSLLAGY 169
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
NGLY +L+ +M+ GVL + +T VI A G G VH V++ GF
Sbjct: 170 SWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVV----GIGLQVHAMVVKHGF 225
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ + + N LI +Y+++G + D+ +FDK+ ++++++WN M +G+ N E+F +
Sbjct: 226 EEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNK 285
Query: 228 MELEGLEPNFVTWTSLLSSHA-----------------------------------RCGR 252
M+L G++P +T+ S++ S A +C
Sbjct: 286 MQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKE 345
Query: 253 LEETMDLFDM--------------------------------MRKRGIEVGAEAIAVVLS 280
+++ + LF + MR+ G++ + +L+
Sbjct: 346 MDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILT 405
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
V + M H VIK +E V AL+ Y K G+ A +F IE K++++
Sbjct: 406 VHYPVFVSEM----HAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMA 461
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
W+A++ YA+ G +EA ++F QL K +G +PN ++S+VI A AS
Sbjct: 462 WSAMLAGYAQTGETEEAAKLFHQLIK-EG---IKPNEFTFSSVINACAS----------- 506
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
+AA G++ H + +++ +N + V + L+ MY K
Sbjct: 507 -----------------------PTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKR 543
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
G ++ H VF++ +++DL++WNSMISGY +G + AL F+EM + D V F+ V+
Sbjct: 544 GNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVI 603
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
+AC+HAGLV +G++ F+ M+ + I P M+HY+CM+DL RAG+L++A I+ MP P
Sbjct: 604 TACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPG 663
Query: 581 AYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRIS 640
A VW TLL + R+H+N ++ E A ++ L E + +Y+LLSN+YAA+G W++ VR
Sbjct: 664 ATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKL 723
Query: 641 AKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
+ +KK G SWIEVK K + F +G+ + L EL++++++ G PD
Sbjct: 724 MDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPD 779
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 134/282 (47%), Gaps = 39/282 (13%)
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
LL S++R + +E ++LF + ++ ++ V ++CA +G+ +H +K G
Sbjct: 64 LLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFG 123
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
D+V V +L+ +Y K +V + +F E+ E+N+VSW +L+ Y+ GL E+F
Sbjct: 124 LVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFC 183
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
Q MQ V+ N T+S +++
Sbjct: 184 Q---------------------------------------MQYEGVLPNRYTVSTVIAAL 204
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
+ IG ++H VV+ + I V N L+++Y + G L + VF+++E +D +TWN
Sbjct: 205 VNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWN 264
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
SMI+GY NG F +M AG KP + F +V+ +C+
Sbjct: 265 SMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCA 306
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 117/216 (54%), Gaps = 3/216 (1%)
Query: 374 RPNVI-SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
RP + + ++ +++ + + +EAL+LF + + + + T+S + ++CA S +GR
Sbjct: 54 RPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGR 113
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
++H V+ + ++ V L++MYMK + +G VF+++ ++++++W S+++GY NG
Sbjct: 114 QVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNG 173
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
L F +M G P+ V++A + G+V G ++ M+V+ E + +
Sbjct: 174 LYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH-GFEEAIPVF 232
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
++ L R G+L++A D+ M + + W +++
Sbjct: 233 NSLISLYSRLGMLRDARDVFDKMEIR-DWVTWNSMI 267
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 43 TIHQ---LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
T+H + ++H ++I T S+ + +L Y + G DA VFE +
Sbjct: 405 TVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIE---AKDLMA 461
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
W+++L G E A KL+ ++ K G+ + FTF VI AC S G+ H
Sbjct: 462 WSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINAC---ASPTAAAEQGKQFH 518
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+ ++M + + + L+ MYAK G + + ++F + + ++ +SWN M SG++ +
Sbjct: 519 AYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAK 578
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
ALE+F M+ ++ + VT+ ++++ G +E+ F+ M
Sbjct: 579 KALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSM 622
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 194/635 (30%), Positives = 328/635 (51%), Gaps = 81/635 (12%)
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM 123
F+ + ++++Y + G +AR VF+T P + +S+ W +++ S L AL L+ M
Sbjct: 144 FVGSSLMNMYCKAGLTPEARKVFDTMP---ERNSVSWATMISGYASQKLAAEALGLFRLM 200
Query: 124 RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
R+ + F F V+ A + + G+ +H ++ G V + N L+ MYAK
Sbjct: 201 RREEEGENEFVFTSVLSAL----TLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAK 256
Query: 184 MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
G + D+ + F+ KN I TW+++
Sbjct: 257 CGSLDDALQTFETSSDKNSI-----------------------------------TWSAM 281
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
++ +A+ G ++ + LF M GI V++ C+DL A GK +H +++K GF
Sbjct: 282 ITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGF 341
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
E ++V AL+ +Y K + A+ F ++E
Sbjct: 342 ESQIYVMTALVDMYAKCSSIVDARKGFDYLQE---------------------------- 373
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
P+++ W+++IG + NG E+AL L+ +M++ ++ N +T++ +L C+
Sbjct: 374 -----------PDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACS 422
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
AAL G++IH V+ + + + L MY KCGCL++G LVF ++ +D+I+WN+
Sbjct: 423 SLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNA 482
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
MISG NG G+ AL FEEM G KPD V FV +LSACSH GLV G F MM EF
Sbjct: 483 MISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEF 542
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
++P++EHYACMVD+L RAG L+EA + ++ ++ +W +L +CR ++N ++
Sbjct: 543 GMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYA 602
Query: 604 ASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHM 663
++ L ++ + +Y+LLS+IY+A GRWED +VR K +G+ K G SWIE+K +H+
Sbjct: 603 GEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHV 662
Query: 664 FSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
F + + + ++ L +L+ QM+++G P D
Sbjct: 663 FVVKDQMHPQIGDIHVELRQLSKQMKDEGYEPATD 697
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 179/356 (50%), Gaps = 46/356 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H + G + + ++++YA+ G L DA FET+ +S+ W++++
Sbjct: 229 KQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSS---DKNSITWSAMITGY 285
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+G + ALKL+ M G+ FTF VI AC +G+ G+ VH+++L++GF
Sbjct: 286 AQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWE----GKQVHDYLLKLGF 341
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ ++++ L+ MYAK + D+ K FD ++ + + W M G+ N + + AL L+ R
Sbjct: 342 ESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGR 401
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
ME+EG+ PN +T +A VL C+ LAA
Sbjct: 402 MEMEGILPNELT-----------------------------------MASVLKACSSLAA 426
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
GK IH +K GF V + +AL +Y K G +K +F + ++++SWNA+I+
Sbjct: 427 LEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISG 486
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
++ G EA+E+F +++ L+G +P+ +++ ++ A + G E FR M
Sbjct: 487 LSQNGCGKEALELFEEMQ-LEG---TKPDYVTFVNILSACSHMGLVERGWGYFRMM 538
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/443 (25%), Positives = 187/443 (42%), Gaps = 84/443 (18%)
Query: 156 QIVHNHVLQMG----------FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
Q HN LQ G V+I N L+ +YAK ++ ++ +F++++ K+ +SW
Sbjct: 15 QYTHNRSLQKGKALHAQIIKSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSW 74
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
N + +G+ S H G M+LF MR
Sbjct: 75 NCIINGY--------------------------------SQHGPSGS-SHVMELFQRMRA 101
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
A A V + + L G++ H IK VFV ++L+ +Y K
Sbjct: 102 ENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCK------ 155
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
AGL EA +VF +M N +SW+ +I
Sbjct: 156 -------------------------AGLTPEARKVFD--------TMPERNSVSWATMIS 182
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
+AS EAL LFR M+ + N + +LS +N G++IH V+ +
Sbjct: 183 GYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLS 242
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
+ V N L+ MY KCG L++ FE K+ ITW++MI+GY +G + AL F M
Sbjct: 243 IVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMH 302
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
+G +P FV V++ACS G EG+++ D +++ E Q+ +VD+ + +
Sbjct: 303 LSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLK-LGFESQIYVMTALVDMYAKCSSI 361
Query: 566 QEASDIVKNMPMEPNAYVWGTLL 588
+A + EP+ +W +++
Sbjct: 362 VDARKGFDYL-QEPDIVLWTSMI 383
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 12/261 (4%)
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG--EEALDL 399
N+L+ YA+ EA VF +++ D V+SW+ +I ++ +G ++L
Sbjct: 44 NSLVNLYAKCQRLREAKFVFERIQNKD--------VVSWNCIINGYSQHGPSGSSHVMEL 95
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
F++M+ N+ T +G+ + + GR H +++ +++ V + L+NMY K
Sbjct: 96 FQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCK 155
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
G E VF+ + +++ ++W +MISGY L AL F M + F +V
Sbjct: 156 AGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSV 215
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
LSA + LVN G++I + V+ + A +V + + G L +A + +
Sbjct: 216 LSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNA-LVTMYAKCGSLDDALQTFET-SSDK 273
Query: 580 NAYVWGTLLNSCRMHKNTDVA 600
N+ W ++ ++D A
Sbjct: 274 NSITWSAMITGYAQSGDSDKA 294
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
+L G+ +H +++ S + + + N L+N+Y KC L E VFE+I+ KD+++WN +I+
Sbjct: 21 SLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIIN 79
Query: 487 GYGMNGL--GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN-EGRRIFDMMVREF 543
GY +G + + F+ M P+ F V +A S LV+ G R+ + +
Sbjct: 80 GYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAST--LVDAAGGRLAHAVAIKM 137
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ + ++++ +AGL EA + MP E N+ W T+++
Sbjct: 138 DSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMP-ERNSVSWATMIS 182
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 382/757 (50%), Gaps = 101/757 (13%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFG---RLFDARNVFETAPFDCK 94
L+ CKTI +LK H L G + ++++ G L A+ VFE + +
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS--ESY 96
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
+ ++NS++R S+GL A+ L+++M G+ D +TFP + AC R + +
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSAC---AKSRAKGNG 153
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
QI H +++MG+ ++ + N L+ YA+ G++ + K+FD++ +N +SW M G+A
Sbjct: 154 IQI-HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 215 NFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
A++LF RM E + PN VT ++S+ A+ LE ++ +R GIEV
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY----VFVKNALICVYGKHGDVKVAQNL 329
++ ++ + A + K + F++Y + + NA+ Y + G + A +
Sbjct: 273 MVSALVDMYMKCNAIDVAKRL--------FDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 330 FSEIEE--------------------KNIV---------------SW----NALITSYAE 350
F+ + + +NI+ SW NALI Y +
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
D A +F + M V++W++++ + NG + A + F M +V+
Sbjct: 385 CHRQDTAFRIFDR--------MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Query: 411 NSVTISGLL--------------------------------SVCAESAALNIGREIHGHV 438
+ ISGL+ S C AL++ + I+ ++
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
+ + ++ + L++M+ +CG E +F + +D+ W + I M G E A+
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
F++MIE G KPDGVAFV L+ACSH GLV +G+ IF M++ + P+ HY CMVDL
Sbjct: 557 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 616
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
LGRAGLL+EA ++++MPMEPN +W +LL +CR+ N ++A A +I L E TGSY
Sbjct: 617 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 676
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
+LLSN+YA++GRW D AKVR+S K KGL+K G S I+++ K H F+SG+ ++ N+
Sbjct: 677 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIE 736
Query: 679 EVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQR 715
+L+E++ + + G VPD +L ++ K+ + + R
Sbjct: 737 AMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSR 773
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 192/436 (44%), Gaps = 55/436 (12%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
+T N+ + C + + + ++V+ + +G + + + ++ +Y + + A+
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 84 NVFETAPFDCKSSSL-LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
+F+ + +S+L L N++ V GL AL ++ M GV D + I +C
Sbjct: 292 RLFD----EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ + + G+ H +VL+ GF+ +I N LI MY K + +F++FD++ K
Sbjct: 348 SQLRNILW----GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-D 261
++WN + +G+ N + D A E F+ M E N V+W +++S + EE +++F
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMP----EKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
M + G+ + + S C L A + K I+ ++ K G + V + L+ ++ + G
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 322 DVKVAQNLFSEIEEKNIVSWN-----------------------------------ALIT 346
D + A ++F+ + +++ +W +T
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
+ + GL + E+F + KL G S P + + ++ G EEA+ L M +
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVS---PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 407 KVVANSVTISGLLSVC 422
N V + LL+ C
Sbjct: 637 ---PNDVIWNSLLAAC 649
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 181/462 (39%), Positives = 275/462 (59%), Gaps = 12/462 (2%)
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA--DHMGKV 293
V+WTS ++ R GRL E F MR G+E +LS C D ++ + +G +
Sbjct: 24 TIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSGSEALGDL 83
Query: 294 IHGFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+HG+ K G + +V V A++ +Y KH VK A+ +F +E+KN V+WN +I Y G
Sbjct: 84 LHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMIDGYMRNG 143
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
D AV++F ++ + D +ISW+A+I F G EEAL FR+MQ++ V +
Sbjct: 144 QVDNAVKMFDKMPERD--------LISWTAMINGFVKKGFHEEALAWFREMQISGVKPDY 195
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
V I L+ C AL+ G +H +V+ N+ V N L+++Y +CGC+E VF++
Sbjct: 196 VAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDK 255
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+EK+ +++WNS+I G+ NG +L F +M E GFKPD V F L+ACSH GLV EG
Sbjct: 256 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEG 315
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
R F M R+ RI P++EHY C+VDL RAG L+EA +V++MPM+PN V G+LL +CR
Sbjct: 316 LRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEEALKVVQSMPMKPNEVVIGSLLAACR 375
Query: 593 MH-KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
H NT +AE + + + + +Y++LSN+YAA G+WE A+++R K GLKK G
Sbjct: 376 THGNNTVLAERLMKHLSDVNVKGHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQPG 435
Query: 652 QSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
S IE+ H+F +G+S + ++ EVLE ++ ++ +GC
Sbjct: 436 FSSIEIDDCTHVFMAGDSAHVETADIREVLELVSSDLQLQGC 477
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 167/322 (51%), Gaps = 13/322 (4%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF-RFSFGQIV 158
W S + + NG A K + MR GV + TF ++ C G F + G ++
Sbjct: 28 WTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGC---GDFSSGSEALGDLL 84
Query: 159 HNHVLQMGF-QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
H + ++G + +V + ++GMY+K ++ + +FD + KN ++WN M G+ N
Sbjct: 85 HGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMIDGYMRNGQ 144
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
D A+++F +M E + ++WT++++ + G EE + F M+ G++ AI
Sbjct: 145 VDNAVKMFDKMP----ERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIA 200
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
L+ C +L A G +H +V+ F++ V V N+LI +Y + G V+ A+ +F ++E++
Sbjct: 201 ALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKMEKRT 260
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
+VSWN++I +A G E++ F ++++ +P+ ++++ + A + G EE L
Sbjct: 261 VVSWNSVIVGFAANGNAHESLVYFRKMQE----EGFKPDAVTFTGALTACSHVGLVEEGL 316
Query: 398 DLFRKMQLAKVVANSVTISGLL 419
F+ M+ ++ + G L
Sbjct: 317 RYFQTMKRDHRISPRIEHYGCL 338
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 104/193 (53%), Gaps = 7/193 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y R G++ +A +F+ P + + W +++ V G +E AL + +M+ GV D
Sbjct: 139 YMRNGQVDNAVKMFDKMP---ERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDY 195
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
+ AC +G+ SFG VH +V+ F+ NV + N LI +Y + G + + +
Sbjct: 196 VAIIAALNACTNLGAL----SFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFARE 251
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+FDK+ + +SWN + GFA N + +L F++M+ EG +P+ VT+T L++ + G
Sbjct: 252 VFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGL 311
Query: 253 LEETMDLFDMMRK 265
+EE + F M++
Sbjct: 312 VEEGLRYFQTMKR 324
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 125/248 (50%), Gaps = 39/248 (15%)
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
+++KL+ + E ++SW++ I NGR EA F M+LA V N +T LLS C
Sbjct: 13 KIQKLNQSTSE--TIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGC 70
Query: 423 AE--SAALNIGREIHGHVVRVSMNK-NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
+ S + +G +HG+ ++ ++ +++V +L MY K +++ LVF+ +E K+ +
Sbjct: 71 GDFSSGSEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSV 130
Query: 480 TWNSMISGYGMN-------------------------------GLGENALATFEEMIEAG 508
TWN+MI GY N G E ALA F EM +G
Sbjct: 131 TWNTMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISG 190
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFD-MMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
KPD VA +A L+AC++ G ++ G + +M ++F+ ++ + ++DL R G ++
Sbjct: 191 VKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSN--SLIDLYCRCGCVEF 248
Query: 568 ASDIVKNM 575
A ++ M
Sbjct: 249 AREVFDKM 256
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 177/486 (36%), Positives = 284/486 (58%), Gaps = 18/486 (3%)
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC 282
++ M L GL+P + + +++ +A G ++ ++ +F+ + VL
Sbjct: 91 QVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGDY------FTFPFVLKSS 144
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
+L + MGK +HG +++ G + ++V +LI +YGK G++ A +F + +++ SWN
Sbjct: 145 VELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWN 204
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
AL+ Y ++G D A+ +F + M N++SW+ +I ++ +G ++AL LF +
Sbjct: 205 ALLAGYTKSGCIDAALAIFER--------MPWRNIVSWTTMISGYSQSGLAQQALSLFDE 256
Query: 403 M--QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
M + + V N VTI +L CA+ + L GR+IH R+ +N N V L MY KC
Sbjct: 257 MVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKC 316
Query: 461 GCLEEGHLVFEQIEK--KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
G L + F+++ + K+LI WN+MI+ Y G G A++TF EMI+AG +PD + F
Sbjct: 317 GSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTG 376
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
+LS CSH+GLV+ G + F+ M + I P++EHYAC+ DLLGRAG L EAS +V MPM
Sbjct: 377 LLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMP 436
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
+WG+LL +CR H+N ++AE A ++F L E TG+Y+LLSN+YA +GRW++ K+R
Sbjct: 437 AGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLR 496
Query: 639 ISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
K++G KK G SWIE+ K HMF G++ K + LE L +M+ G PD
Sbjct: 497 AIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTS 556
Query: 699 IILWEM 704
+L ++
Sbjct: 557 YVLHDI 562
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/445 (25%), Positives = 201/445 (45%), Gaps = 93/445 (20%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
QVH +++ G +A + +++++ YA G D SS V+V
Sbjct: 91 QVHAHMLLRGLQPTALVGSKMVAFYASSG--------------DIDSS---------VSV 127
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
NG+ GD FTFP V+++ + S G+ VH +L++G Q
Sbjct: 128 FNGI-----------------GDYFTFPFVLKSSVELLSVWM----GKCVHGLILRIGLQ 166
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
++++ LI +Y K G+++D+ K+FD + +++ SWN + +G+ + D AL +F+RM
Sbjct: 167 FDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERM 226
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR--GIEVGAEAIAVVLSVCADLA 286
N V+WT+++S +++ G ++ + LFD M K G+ I VL CA L+
Sbjct: 227 PWR----NIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLS 282
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI--EEKNIVSWNAL 344
G+ IH + G V AL +Y K G + A+N F ++ EKN+++WN +
Sbjct: 283 TLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTM 342
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
IT+YA S G G +A+ FR+M
Sbjct: 343 ITAYA---------------------------------------SYGHGLQAVSTFREMI 363
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHV-VRVSMNKNILVQNGLLNMYMKCGCL 463
A + + +T +GLLS C+ S +++G + H+ S+N + + ++ + G L
Sbjct: 364 QAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRL 423
Query: 464 EEG-HLVFEQIEKKDLITWNSMISG 487
E LV E W S+++
Sbjct: 424 AEASKLVGEMPMPAGPSIWGSLLAA 448
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 108/239 (45%), Gaps = 22/239 (9%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
Q T+ + +Q+H G N++A + + ++YA+ G L DARN F+ + K + +
Sbjct: 280 QLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEK-NLIA 338
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN+++ S G A+ + +M + G+ D TF ++ C G G
Sbjct: 339 WNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSG----LVDVGLKYF 394
Query: 160 NHVLQMGFQGNVHIVNELIGMYA-------KMGQMSDSFKLFDKVRVKNYIS-WNMMFSG 211
NH+ + +N + YA + G+++++ KL ++ + S W + +
Sbjct: 395 NHM------STTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSLLAA 448
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
+ + + A +++ + LEP LLS+ +A GR +E L +++ +G +
Sbjct: 449 CRKHRNLEMAETAARKLFV--LEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTK 505
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 225/830 (27%), Positives = 390/830 (46%), Gaps = 164/830 (19%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F H++Q+C + LK Q H ++IV+G +++ ++ +Y R L A VFE
Sbjct: 46 FSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMS 105
Query: 91 ---------------------------FDC-KSSSLLWNSILRVNVSNGLYENALKLYVK 122
+D K + WNS+L + NG ++ +++
Sbjct: 106 QRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLD 165
Query: 123 MRKLGVLG-DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
M + +G D TF +V++AC + G VH +++MGF +V + L+ MY
Sbjct: 166 MGRSEEVGFDQTTFAVVLKACSVLEDG----GLGIQVHGLIVRMGFYKDVVTGSALLDMY 221
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL-------- 233
AK ++ DS K+F ++ VKN++ W+ + +G N + LELFK M+ G+
Sbjct: 222 AKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYA 281
Query: 234 ---------------------------EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
+ T+ L +A+CG L + +F+ + K
Sbjct: 282 SVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKH 341
Query: 267 GI-------------EVGAEAIAV------------------VLSVCADLAADHMGKVIH 295
+ E G EA+ S CA + D G+ +H
Sbjct: 342 SLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLH 401
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
+K + V N+++ +YGK + A +F E+E ++ VSWNA+I ++ + G +
Sbjct: 402 SLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEE 461
Query: 356 EAVEVFSQLEKLD---------------------GGSMERPNVISWS----------AVI 384
E + +F+ + +L ME N I S A+I
Sbjct: 462 ETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALI 521
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISG--------------------------- 417
+ G EEA + +++ +V+ + I+G
Sbjct: 522 DMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNF 581
Query: 418 ----LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
+L CA A++ +G++IHG ++++ ++ ++ + + L++MY KCG +++ LVFE+
Sbjct: 582 TYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKA 641
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
KD +TWN+MI GY +GLGE AL FE M +P+ FV++L AC+H G +++G
Sbjct: 642 PNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGL 701
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRM 593
F+ M+ E+ +EPQ+EHY+CM+D++GR+G + EA +++ MP E +A +W TLL+ C++
Sbjct: 702 HYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKI 761
Query: 594 HKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
H N ++AE + I L E + + +LLSNIYA +G W +++R + LKK G S
Sbjct: 762 HGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCS 821
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWE 703
WIEVK ++H F GN + + ++L L +M+ G +PD D ++ E
Sbjct: 822 WIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWIGYIPDIDFLIDE 871
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 143/593 (24%), Positives = 261/593 (44%), Gaps = 104/593 (17%)
Query: 95 SSSLLWNSILRV---NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR 151
+S +L+N LR+ + L +N KL K+R TF +I+ C S +
Sbjct: 12 ASRILYNKTLRIFTFCTISTLQQNQTKLPTKIR---------TFSHIIQECSDYNSLKP- 61
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
G+ H ++ GF +V+I N L+ MY + ++ ++K+F+K+ ++ IS+N M SG
Sbjct: 62 ---GKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISG 118
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEV 270
+A + + A E F + + + V+W S+LS + G +++D+F DM R +
Sbjct: 119 YADAGEMNLANEFF----YDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGF 174
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
AVVL C+ L +G +HG +++ GF V +AL+ +Y K + + +F
Sbjct: 175 DQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIF 234
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
SEI KN V W+A+I + DE ++G
Sbjct: 235 SEIPVKNWVCWSAIIAGCVQN---DE-------------------------HILG----- 261
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
L+LF++MQ + + + + CA +AL +G ++H H ++ +I V
Sbjct: 262 ------LELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVG 315
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
L+MY KCG L + +F + K L +N++I G N G AL F+ ++++G
Sbjct: 316 TATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLG 375
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
+ ++ SAC+ +GR++ + V+ + + ++D+ G+ L EA
Sbjct: 376 FNEISLSGAFSACASIKGDLDGRQLHSLSVKS-TLRSNICVANSILDMYGKCEALSEACC 434
Query: 571 IVKNMP----------------------------------MEPNAYVWGTLLNSCRMHKN 596
+ M MEP+ + +G++L +C +
Sbjct: 435 MFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQA 494
Query: 597 TDVAEAMASQI----FGLITETTGSYMLLSNIYAASGRWEDAAKV--RISAKT 643
+ + ++I GL + G+ L ++Y G E+A K+ RI +T
Sbjct: 495 LNSGMEIHNRIIKSGLGLDSFVGGA---LIDMYCKCGMIEEAKKIHDRIEQQT 544
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 197/558 (35%), Positives = 300/558 (53%), Gaps = 79/558 (14%)
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
+++AC G S G+ VH ++ N L+ MYAK G +
Sbjct: 4 ILQACANCGDV----SLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVL---------- 49
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
DGA+ +F M + + VTWTSL++++AR G +E +
Sbjct: 50 ---------------------DGAILVFDLMSVRTV----VTWTSLIAAYAREGLSDEAI 84
Query: 258 DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
LF M + G+ I VL CA + GK +H ++ + + +FV C
Sbjct: 85 RLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFV-----C-- 137
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
NAL+ YA+ G ++A VF ++ D +
Sbjct: 138 ------------------------NALMDMYAKCGSMEDANSVFLEMPVKD--------I 165
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
ISW+ +IG ++ N EAL LF M L ++ + T++ +L CA A+L+ G+E+HGH
Sbjct: 166 ISWNTMIGGYSKNSLPNEALSLFGDMVL-EMKPDGTTLACILPACASLASLDRGKEVHGH 224
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
++R + V N L++MY+KCG L+F+ I KDLITW MI+GYGM+G G NA
Sbjct: 225 ILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNA 284
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
+ TF EM +AG +PD V+F+++L ACSH+GL++EG R F++M E ++P++EHYAC+VD
Sbjct: 285 ITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVD 344
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
LL R+G L A +K+MP+EP+A +WG LL+ CR+H + +AE +A +F L E TG
Sbjct: 345 LLARSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGY 404
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
Y+LL+N YA + +WE+ K+R +GLKK G SWIEVK K+H+F +GNS K +
Sbjct: 405 YVLLANTYAEAEKWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKI 464
Query: 678 CEVLEELALQMENKGCVP 695
+L+ L +M+ +G P
Sbjct: 465 EVLLKRLRSKMKEEGYFP 482
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 173/371 (46%), Gaps = 50/371 (13%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+LQ C + + VH + + +L +YA+ G L A VF+
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSV-- 61
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + W S++ GL + A++L+ +M + GV D FT V+ AC GS
Sbjct: 62 -RTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLEN--- 117
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ VHN++ + Q N+ + N L+ MYAK G M D+ +F ++ VK+ ISWN M G++
Sbjct: 118 -GKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYS 176
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
N + AL LF M LE ++P+ T
Sbjct: 177 KNSLPNEALSLFGDMVLE-MKPDGTT---------------------------------- 201
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+A +L CA LA+ GK +HG +++ GF V NAL+ +Y K G +A+ LF I
Sbjct: 202 -LACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMI 260
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
K++++W +I Y G + A+ F+++ + +E P+ +S+ +++ A + +G
Sbjct: 261 PTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQ---AGIE-PDEVSFISILYACSHSGLL 316
Query: 394 EEALDLFRKMQ 404
+E F MQ
Sbjct: 317 DEGWRFFNVMQ 327
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 161/340 (47%), Gaps = 18/340 (5%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K VHN + ++ F+ ++ +YA+ G + DA +VF P + WN+++
Sbjct: 119 KDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPV---KDIISWNTMIGGY 175
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
N L AL L+ M L + DG T ++ AC + S G+ VH H+L+ GF
Sbjct: 176 SKNSLPNEALSLFGDM-VLEMKPDGTTLACILPACASLASL----DRGKEVHGHILRNGF 230
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ + N L+ MY K G + LFD + K+ I+W +M +G+ ++ + A+ F
Sbjct: 231 FSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNE 290
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCADLA 286
M G+EP+ V++ S+L + + G L+E F++M+ ++ E A ++ + LA
Sbjct: 291 MRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDL---LA 347
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS---EIEEKNIVSWNA 343
+ + F+ E + AL+ H DVK+A+ + E+E +N +
Sbjct: 348 RSGKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVL 407
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
L +YAEA ++ EV +K+ +++ SW V
Sbjct: 408 LANTYAEA---EKWEEVKKLRQKIGRRGLKKNPGCSWIEV 444
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 201/673 (29%), Positives = 344/673 (51%), Gaps = 88/673 (13%)
Query: 31 LDCFDHLL--QQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNV 85
DC L+ Q C + LK Q+H I ++ +L++Y+ G L + +
Sbjct: 253 FDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQL 312
Query: 86 FETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
FE+ P + LWNS++ + G +E A+ L+++M+ GV D T +++ C+ +
Sbjct: 313 FESVP---NRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEEL 369
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
S + G+ +H HV++ G + + + N L+ MY ++ + K+FD+++ + ISW
Sbjct: 370 ASGLLK---GKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISW 426
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
N +++ + AR + +LF+ MR+
Sbjct: 427 N-----------------------------------TMILALARNTLRAQACELFERMRE 451
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
I+ + I +L+ C D+ G+ IHG+V+K E ++ AL +Y GD
Sbjct: 452 SEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEAT 511
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A++LF ++++ ISW+A+I
Sbjct: 512 ARDLFEGCPDRDL---------------------------------------ISWNAMIA 532
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR--VSM 443
++ N + +AL LF +M +++ NSVTI +LS A L G+ +H +V R S+
Sbjct: 533 SYVKNNQAHKALLLFHRM-ISEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSL 591
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
++ + N + MY +CG L+ +F+ + K+++I+WN+MI+GYGMNG G +A+ F +
Sbjct: 592 GLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQ 651
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M+E GF+P+GV FV+VLSACSH+G + G ++F MV++F + P++ HY+C+VDLL R G
Sbjct: 652 MLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGG 711
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
+ EA + + +MP+EP+A VW LL+SCR + + A+ + ++ L G+Y+LLSN
Sbjct: 712 CIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSN 771
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
+YA +G W + ++R K KGL+K G SWI VK ++H FS+G+ + L
Sbjct: 772 VYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKIYAKLSI 831
Query: 684 LALQMENKGCVPD 696
L M G PD
Sbjct: 832 LLSSMRETGYDPD 844
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 140/545 (25%), Positives = 240/545 (44%), Gaps = 86/545 (15%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K +H + T + V+ Y + G + DAR VF+ +LWN+++
Sbjct: 73 KSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMS---DRDVVLWNAMVYGY 129
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG- 166
V G YE A+ L +M + + + T ++ AC+ R G+ VH + L+ G
Sbjct: 130 VGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRL----GRGVHGYCLRNGM 185
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F N H+ LIG Y + M LFD + V+N +SWN M SG+ D ALELF
Sbjct: 186 FDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFV 244
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
+M ++ ++ + VT + V + CA+L
Sbjct: 245 QMLVDEVKFDCVT-----------------------------------MLVAVQACAELG 269
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
+ +GK IH IK F + +++ NAL+ +Y +G ++ + LF + ++ WN++I+
Sbjct: 270 SLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMIS 329
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
+YA G +EA +DLF +MQ
Sbjct: 330 AYAAFGCHEEA---------------------------------------MDLFIRMQSE 350
Query: 407 KVVANSVTISGLLSVCAESAA-LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
V + T+ +LS+C E A+ L G+ +H HV++ M + + N LL+MY + C+E
Sbjct: 351 GVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVES 410
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
+F++++ D+I+WN+MI N L A FE M E+ KP+ +++L+AC
Sbjct: 411 VQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACED 470
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
++ GR I +++ IE + D+ G A D+ + P + + W
Sbjct: 471 VTCLDFGRSIHGYVMKH-SIEINQPLRTALADMYMNCGDEATARDLFEGCP-DRDLISWN 528
Query: 586 TLLNS 590
++ S
Sbjct: 529 AMIAS 533
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 130/529 (24%), Positives = 216/529 (40%), Gaps = 118/529 (22%)
Query: 100 WNSILR--VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
WNS+++ N+ N + L Y +M LGVL + T PLV++AC + G+
Sbjct: 21 WNSVIKHQANLKND--QAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVER----GKS 74
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H + +V + ++ Y K G + D+ +FD + ++ + WN M G+
Sbjct: 75 IHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGY----- 129
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
V W G EE M L M + + + +
Sbjct: 130 --------------------VGW----------GCYEEAMLLVREMGRENLRPNSRTMVA 159
Query: 278 VLSVCADLAADHMGKVIHGFVIKGG-FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
+L C + +G+ +HG+ ++ G F+ V ALI Y + D++V LF + +
Sbjct: 160 LLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVR 218
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
NIV SW+A+I + G +A
Sbjct: 219 NIV---------------------------------------SWNAMISGYYDVGDYFKA 239
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
L+LF +M + +V + VT+ + CAE +L +G++IH ++ +++ + N LLNM
Sbjct: 240 LELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNM 299
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y G LE H +FE + +D WNSMIS Y G E A+ F M G K D
Sbjct: 300 YSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTV 359
Query: 517 VAVLSACS------------HAGLVNEGRRI-------FDMMVREF-------RIEPQME 550
V +LS C HA ++ G RI M E +I +M+
Sbjct: 360 VIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMK 419
Query: 551 -----HYACMVDLLGRAGLLQEASDIVKNM---PMEPNAYVWGTLLNSC 591
+ M+ L R L +A ++ + M ++PN+Y ++L +C
Sbjct: 420 GVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAAC 468
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 179/491 (36%), Positives = 303/491 (61%), Gaps = 13/491 (2%)
Query: 219 DGALELFKRMELEGLE-PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
D ++ + R+ + +E PN WT+L+ +A G E++ L++ MR++GI +
Sbjct: 85 DVPMDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTA 144
Query: 278 VLSVCADLAADHMGKVIHG-FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
+L C+ ++G+ +H ++ GGF ++V N LI +Y K G + +F E+ ++
Sbjct: 145 LLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDR 204
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
+++SW +LI +YA+ G + A E+F DG M+ ++++W+A++ +A N R EA
Sbjct: 205 DVISWTSLIVAYAKVGNMEAASELF------DGLPMK--DMVAWTAMVTGYAQNARPREA 256
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM--NKNILVQNGLL 454
L++F +MQ A V + VT+ G++S CA+ A + + N++V + L+
Sbjct: 257 LEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALI 316
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCG +E+ + VFE++E++++ +++SMI G+ M+GL A+ F+EM++ KP+ V
Sbjct: 317 DMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRV 376
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F+ VL+ACSHAG+V +G+++F MM + P +HYACMVDLLGRAG L+EA ++VK
Sbjct: 377 TFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKM 436
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MPM P+ VWG LL +CR+H N D+A+ AS +F L G+Y+LLSNIYA++GRW+D
Sbjct: 437 MPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDV 496
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRK-IHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
+KVR + KGLKK G SW+E K+ IH F +G+ + + + LE+L +++ G
Sbjct: 497 SKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGY 556
Query: 694 VPDNDIILWEM 704
P+ + +++
Sbjct: 557 QPNLSSVAYDI 567
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 186/429 (43%), Gaps = 82/429 (19%)
Query: 20 PFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRL 79
PFS+ L +L C I+Q+KQVH + G F+ A++L +
Sbjct: 28 PFSVRQEQKILESRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVP 87
Query: 80 FDA--RNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPL 137
D R VF+ + + LW +++R G + ++ LY MR+ G+ FTF
Sbjct: 88 MDPYPRLVFQQVEY---PNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTA 144
Query: 138 VIRACKFMGSFRFRFSFGQIVHNH-VLQMGFQGNVHIVNELIGMY--------------- 181
+++AC S + G+ VH +L GF ++++ N LI MY
Sbjct: 145 LLKAC----SAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDE 200
Query: 182 ----------------AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
AK+G M + +LFD + +K+ ++W M +G+A N ALE+F
Sbjct: 201 MLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVF 260
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
+RM+ G++ + VT + V+S CA L
Sbjct: 261 ERMQAAGVKTDEVT-----------------------------------LVGVISACAQL 285
Query: 286 AADHMGKVIHGFVIKGGF--EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
A + + GF V V +ALI +Y K G V+ A +F +EE+N+ S+++
Sbjct: 286 GAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSS 345
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+I +A GL A+E+F ++ K + +PN +++ V+ A + G E+ LF M
Sbjct: 346 MIVGFAMHGLAGAAMELFDEMLKTE----IKPNRVTFIGVLTACSHAGMVEQGQQLFAMM 401
Query: 404 QLAKVVANS 412
+ VA S
Sbjct: 402 EECHGVAPS 410
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 143/295 (48%), Gaps = 18/295 (6%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
YA+ G + A +F+ P + W +++ N AL+++ +M+ GV D
Sbjct: 216 YAKVGNMEAASELFDGLPM---KDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDE 272
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF--QGNVHIVNELIGMYAKMGQMSDS 190
T VI AC +G+ ++ V + Q GF NV + + LI MYAK G + D+
Sbjct: 273 VTLVGVISACAQLGAAKY----ANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDA 328
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
+K+F+++ +N S++ M GFA++ A+ELF M ++PN VT+ +L++ +
Sbjct: 329 YKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHA 388
Query: 251 GRLEETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFV 309
G +E+ LF MM + G+ + A ++ + A + + ++ V + V
Sbjct: 389 GMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGR--AGRLEEALN-LVKMMPMNPHGGV 445
Query: 310 KNALICVYGKHGDVKVAQ----NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
AL+ HG+ +AQ +LF E+E I ++ L YA AG D+ +V
Sbjct: 446 WGALLGACRIHGNPDMAQIAASHLF-ELEPNGIGNYILLSNIYASAGRWDDVSKV 499
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 8/235 (3%)
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH--LVFEQI 473
S L+SV +N +++H H+ R + + V LL K + + LVF+Q+
Sbjct: 40 SRLVSVLHGCTHINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQV 99
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
E + W ++I GY + G ++ + M G P F A+L ACS A VN GR
Sbjct: 100 EYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGR 159
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRM 593
++ + + ++D+ + G L + M ++ + W +L+ +
Sbjct: 160 QVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEM-LDRDVISWTSLIVAYAK 218
Query: 594 HKNTDVAEAMASQIF-GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
N + AS++F GL + ++ + YA + R +A +V + G+K
Sbjct: 219 VGNMEA----ASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVK 269
>gi|326507326|dbj|BAJ95740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 798
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 203/627 (32%), Positives = 324/627 (51%), Gaps = 35/627 (5%)
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
GR+ +A ++E P S + + + V N L+ NAL ++ KM GV +G TF
Sbjct: 196 GRVAEAVELYEQCP---SGSVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFV 252
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
+I+AC G F S IV + + F+ ++ + N LI +Y +MG + + K+FD+
Sbjct: 253 CMIKACVGAGEFGLAMS---IVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDE 309
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
+ VK+ +SW + ++ + D DGA + M E N V+W +L++ H + G E
Sbjct: 310 MDVKDVVSWTALLDVYSESGDLDGARRVLDAMP----ERNEVSWGTLIARHEQRGNAAEA 365
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
+ L+ M G + VLS CA L G IH +K G VFV ++LI +
Sbjct: 366 VKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDM 425
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
Y K + AQ +F + EKNIV WN+L + Y+ G EA+ +F + M N
Sbjct: 426 YCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKK--------MPARN 477
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
+ SW+ +I +A N + +AL F M + V +T S +L CA +L G+ H
Sbjct: 478 LASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHA 537
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
+++ M ++I + L +MY K G L+ +F Q+ +++ +TW +MI G NG E
Sbjct: 538 KTIKLGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGFAEE 597
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
++ E+M+ G P+ F+A+L ACSH GLV + F+ M + + I P+ +HY CMV
Sbjct: 598 SILLLEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKM-QAWGISPKEKHYTCMV 656
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
D+L RAG L EA ++ P + A W LL++C +KN ++ E A ++ L + T
Sbjct: 657 DVLARAGRLIEAEALLMKTPSKSEANSWAALLSACNTYKNEEIGERAAKRLHELGKDNTA 716
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKN 676
Y+LLSN+YA+ GRW+DAA++R+ K LKK G SW++V+ + H F S +
Sbjct: 717 GYVLLSNMYASCGRWKDAARIRVLMKGTTLKKDGGCSWVQVRGQYHAFFSWEAKHPLSME 776
Query: 677 VCEVLEELALQMENKGCVPDNDIILWE 703
+ E+L D++LWE
Sbjct: 777 INEIL----------------DLLLWE 787
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 206/482 (42%), Gaps = 90/482 (18%)
Query: 152 FSFGQIVHNHVLQMG--------FQG----NVHIVNELIGMYAKMGQMSDSFKLFDKVRV 199
F++ +VH HV + G F G NV ++ K G+++++ +L+++
Sbjct: 152 FTYDFMVHEHV-KAGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYEQCPS 210
Query: 200 KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDL 259
+ + SGF N AL +F++M G+ PN +T+ ++ + C
Sbjct: 211 GSVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKA---C--------- 258
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG-FEDYVFVKNALICVYG 318
VGA + +S+ G IK FE + V+N+LI +Y
Sbjct: 259 ----------VGAGEFGLAMSIV-------------GSAIKSNFFESSIEVQNSLITLYL 295
Query: 319 KHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
+ GD A+ +F E++ K++VSW AL+ Y+E+G D A V +M N +
Sbjct: 296 RMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLDGARRVLD--------AMPERNEV 347
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHV 438
SW +I G EA+ L+ +M N S +LS CA L G IH
Sbjct: 348 SWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARS 407
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN------- 491
+++ + N+ V + L++MY KC + +F+ + +K+++ WNS+ SGY N
Sbjct: 408 LKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAM 467
Query: 492 -------------------GLGEN-----ALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
G +N AL +F M+ +G P + F +VL AC++
Sbjct: 468 YLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLC 527
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
+ G+ ++ +E + + D+ ++G LQ + + MP E N W +
Sbjct: 528 SLVTGKMAHAKTIK-LGMEESIFIGTALSDMYAKSGDLQSSKRMFYQMP-ERNDVTWTAM 585
Query: 588 LN 589
+
Sbjct: 586 IQ 587
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 171/393 (43%), Gaps = 48/393 (12%)
Query: 31 LDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
+ CF +L C T+ L+ ++H + + G++ + F+++ ++ +Y + + DA+ +F+
Sbjct: 381 ISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFD 440
Query: 88 TAP---------------FDCKSSSLL-------------WNSILRVNVSNGLYENALKL 119
T P ++ K + WN+I+ N + +AL+
Sbjct: 441 TLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRS 500
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
+ M G + TF V+ AC + S G++ H +++G + ++ I L
Sbjct: 501 FNAMLASGQVPGEITFSSVLLACANLCS----LVTGKMAHAKTIKLGMEESIFIGTALSD 556
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MYAK G + S ++F ++ +N ++W M G A N + ++ L + M G+ PN T
Sbjct: 557 MYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGFAEESILLLEDMMATGMTPNEHT 616
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI--HGF 297
+ +LL + + G +E+ + F+ M+ GI + ++ V A G++I
Sbjct: 617 FLALLFACSHGGLVEQAIHYFEKMQAWGISPKEKHYTCMVDVLA-----RAGRLIEAEAL 671
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKV---AQNLFSEIEEKNIVSWNALITSYAEAGLC 354
++K + AL+ + + ++ A E+ + N + L YA G
Sbjct: 672 LMKTPSKSEANSWAALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRW 731
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+A + ++ G ++++ SW V G +
Sbjct: 732 KDAARIRVLMK---GTTLKKDGGCSWVQVRGQY 761
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 142/330 (43%), Gaps = 48/330 (14%)
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
F + ++ + K GD+ A+ LF + E+N+VS+ ++ + + G EAVE++ E+
Sbjct: 152 FTYDFMVHEHVKAGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELY---EQC 208
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
GS V ++A I F N AL +FRKM V N +T ++ C +
Sbjct: 209 PSGS-----VAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGE 263
Query: 428 LNIGREIHGHVVRVS-MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
+ I G ++ + +I VQN L+ +Y++ G VF++++ KD+++W +++
Sbjct: 264 FGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLD 323
Query: 487 GYG-------------------------------MNGLGENALATFEEMIEAGFKPDGVA 515
Y G A+ + +M+ G +P+
Sbjct: 324 VYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISC 383
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY--ACMVDLLGRAGLLQEASDIVK 573
F +VLSAC+ + G RI R ++ + + ++D+ + ++A I
Sbjct: 384 FSSVLSACATLEDLRGGARIH---ARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFD 440
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+P E N W +L + N + EAM
Sbjct: 441 TLP-EKNIVCWNSLASG--YSYNGKMVEAM 467
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 345 bits (885), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 184/452 (40%), Positives = 274/452 (60%), Gaps = 24/452 (5%)
Query: 278 VLSVCADLAADHMGKVIHGFVIKGG-FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
VL CA + A GK +HG ++ G FED +FV NAL+ +Y K G V A +F I+EK
Sbjct: 19 VLPACASMGAWLHGKAVHGIAVRSGSFED-LFVGNALVDMYAKCGMVDEASKVFDRIKEK 77
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
++VSWNA++ Y++ G ++A+ +F EK+ ++E NV+SWSAVI AFA G G E
Sbjct: 78 DVVSWNAMVNGYSQIGRFEDALGLF---EKMREENIEL-NVVSWSAVIAAFAQRGLGCET 133
Query: 397 LDLFRKMQLAK-----------------VVANSVTISGLLSVCAESAALNIGREIHGHVV 439
LD+FR+MQ + V N TIS L CA AAL +GR+IH +++
Sbjct: 134 LDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYIL 193
Query: 440 RVSMNKNIL-VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
R + L V N L++MY K G ++ VF+ +++K+ ++W S+++GYGM+G G+ AL
Sbjct: 194 RNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEAL 253
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
F+EM G +PDGV + VL ACSH+G++++G F+ M +EF + P EHYACMVDL
Sbjct: 254 EVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDL 313
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
LGRAG L EA ++++ M MEP++ VW LL+ CR+H N ++ E A Q+ L +E GSY
Sbjct: 314 LGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDGSY 373
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
LLSNIYA + RW+D A+VR K G++K G SW++ K+ F + K +
Sbjct: 374 TLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCSWVQGKKGTTTFYVADKTHPQSKQIY 433
Query: 679 EVLEELALQMENKGCVPDNDIILWEMMGKKNV 710
E+L L +++ G VP+ L ++ ++ V
Sbjct: 434 EILRSLTQRIKVLGYVPETSFALHDVDDEEKV 465
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 161/284 (56%), Gaps = 26/284 (9%)
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
V+ AC MG++ G+ VH ++ G ++ + N L+ MYAK G + ++ K+FD++
Sbjct: 19 VLPACASMGAWLH----GKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVFDRI 74
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
+ K+ +SWN M +G++ + AL LF++M E +E N V+W++++++ A+ G ET+
Sbjct: 75 KEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETL 134
Query: 258 DLFD----------------MMRKRG-IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
D+F M ++ G ++ I+ L CA LAA +G+ IH ++++
Sbjct: 135 DVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILR 194
Query: 301 GGFED-YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
F+ +++V N LI +Y K GD+ VA+ +F +++KN VSW +L+T Y G EA+E
Sbjct: 195 NHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALE 254
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
VF ++ ++ +P+ ++ V+ A + +G ++ ++ F M
Sbjct: 255 VFDEMRRVG----LQPDGVTLLVVLYACSHSGMIDQGIEFFNSM 294
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 78/127 (61%)
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
V++ +L CA A G+ +HG VR +++ V N L++MY KCG ++E VF++
Sbjct: 14 VSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVFDR 73
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
I++KD+++WN+M++GY G E+AL FE+M E + + V++ AV++A + GL E
Sbjct: 74 IKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCET 133
Query: 533 RRIFDMM 539
+F M
Sbjct: 134 LDVFREM 140
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 111/224 (49%), Gaps = 11/224 (4%)
Query: 48 KQVHNQLIVTGANASAFL--AARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
+Q+H I+ SAFL A ++ +YA+ G + AR VF+ + + + W S++
Sbjct: 186 RQIH-AYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLK---QKNFVSWTSLMT 241
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
+G + AL+++ +MR++G+ DG T +V+ AC G F + +
Sbjct: 242 GYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVI 301
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALEL 224
Q + + +L+G + G+++++ +L + ++++ + I W + SG ++ + +
Sbjct: 302 PGQEHYACMVDLLG---RAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHA 358
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
K++ LE N ++T L + +A R ++ + +M+ GI
Sbjct: 359 AKQL-LELNSENDGSYTLLSNIYANARRWKDVARVRSLMKNSGI 401
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 345 bits (884), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 220/761 (28%), Positives = 359/761 (47%), Gaps = 123/761 (16%)
Query: 18 SRPFSI---ITYNNSLLDCFDHLLQQCK---TIHQLKQVHNQLIVTGANASAFLAA--RV 69
+RP SI TY + + +L+ C +I + K VH ++ + +
Sbjct: 102 NRPESIGISETYQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHA 161
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL 129
+Y++ A VF+ P + + W ++ + +GL+ + K + +M G+L
Sbjct: 162 AHVYSKCSEFRAACGVFDEMP---QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGIL 218
Query: 130 GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD 189
D F + +I++C + S G++VH ++ GF ++ + L+ MYAK+G + D
Sbjct: 219 PDKFAYSAIIQSCIGLDSLE----LGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIED 274
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM--------------------- 228
S+ +F+ + N +SWN M SG N A +LF RM
Sbjct: 275 SYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGK 334
Query: 229 --------ELE------GLEPNFVTWTSLLSSHARCGRL--------------------- 253
E++ G+E N + T+L+ +++CG L
Sbjct: 335 LVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWN 394
Query: 254 ------------EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
+E ++L+ M + GI V + A + G+V+HG V+K
Sbjct: 395 AMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKC 454
Query: 302 GFEDYVF-VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G + V V NA+ Y K G ++ + +F +EE++IVSW L+T+Y+++ L +EA+
Sbjct: 455 GLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALAT 514
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
F L R+ A N T S +L
Sbjct: 515 FC------------------------------------LMREEGFA---PNQFTFSSVLI 535
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
CA L GR++HG + + ++ +++ L++MY KCG + E VF++I D+++
Sbjct: 536 SCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVS 595
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
W ++ISGY +GL E+AL F M +G K + V + VL ACSH G+V EG F M
Sbjct: 596 WTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQME 655
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
+ + P+MEHYAC++DLLGR G L +A + ++ MPMEPN VW TLL CR+H N ++
Sbjct: 656 DGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELG 715
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
E A +I + E + +Y+LLSN Y +G +ED +R K +G+KK G SWI VK +
Sbjct: 716 EIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGR 775
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+H F SG+ K + LEEL +++ G VPD +L
Sbjct: 776 VHKFYSGDQQHPQKKEIYVKLEELREKIKAMGYVPDLRYVL 816
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 345 bits (884), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 204/665 (30%), Positives = 359/665 (53%), Gaps = 75/665 (11%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
K+ Q +Q+H Q++ A++ L+ +LSIY+ L D+ +F T F +L W
Sbjct: 20 KSRSQAQQLHAQVLKFQASSLCNLSL-LLSIYSHINLLHDSLRLFNTIHF---PPALAWK 75
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
S++R S+GL +L ++ M G+ D FP V+++C + + G+ +H +
Sbjct: 76 SVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALL----MDLNLGESLHGY 131
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFK-------LFDKV--RVKNYISWNMMFSGF 212
++++G +++ N L+ MY+K+ + +S + +FD++ R ++ + +++
Sbjct: 132 IIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSE-- 189
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
D ++F+ M E + V+W ++++ +AR G EET+ + M ++ +
Sbjct: 190 ------DSVRKIFEMMP----EKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDS 239
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
++ VL + A+ GK IHG I+ G + ++V ++LI +Y K V
Sbjct: 240 FTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVA-------- 291
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
++ VF+ L + DG ISW+++I NG
Sbjct: 292 -----------------------DSCRVFTLLTERDG--------ISWNSIIAGCVQNGL 320
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
+E L FR+M +AK+ S + S ++ CA L++G+++HG++ R ++NI + +
Sbjct: 321 FDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASS 380
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++MY KCG + +F+++ +D+++W +MI G ++G +A+ FE+M G K
Sbjct: 381 LVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-- 438
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
AVL+ACSH GLV+E + F+ M R+F I P +EHYA + DLLGRAG L+EA D +
Sbjct: 439 -----AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFI 493
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
M + P +W TLL++CR+HKN D+AE +A++I + TG+Y+LL+NIY+A+ RW+
Sbjct: 494 CGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWK 553
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
+AAK R S + G++K SWIEVK K++ F +G+ + + E +E L ME +G
Sbjct: 554 EAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREAMEVLVELMEKEG 613
Query: 693 CVPDN 697
VPD
Sbjct: 614 YVPDT 618
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 180/379 (47%), Gaps = 34/379 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
L+ + I + K++H I G +A ++A+ ++ +YA+ R+ D+ VF +
Sbjct: 248 LIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLL---TERD 304
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
+ WNSI+ V NGL++ L+ + +M + ++F ++ AC + + G+
Sbjct: 305 GISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLH----LGK 360
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H ++ + GF N+ I + L+ MYAK G + + ++FD++R+++ +SW M G AL+
Sbjct: 361 QLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHG 420
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAI 275
A+ELF++ME EG++ ++L++ + G ++E F+ M R GI G E
Sbjct: 421 QAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHY 473
Query: 276 AVVLSVCADLAADHMGKV-----IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ--- 327
A V +D +G+ + F+ + L+ H ++ +A+
Sbjct: 474 AAV--------SDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVA 525
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
N E++ N ++ L Y+ A EA + + + ++ + + SW V
Sbjct: 526 NRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRI---GIRKTPACSWIEVKNKV 582
Query: 388 ASNGRGEEALDLFRKMQLA 406
+ G+E+ + K++ A
Sbjct: 583 YAFMAGDESHPCYEKIREA 601
>gi|356519999|ref|XP_003528655.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Glycine max]
Length = 629
Score = 345 bits (884), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 205/619 (33%), Positives = 321/619 (51%), Gaps = 19/619 (3%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
AR G++ DAR +F+ P S+ WN++L GLY+ +L L+ MR D F
Sbjct: 16 ARSGQISDARKLFDEIP---HKDSVAWNAMLTAYSHVGLYQQSLSLFGCMRISHSKPDNF 72
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
+F V+ AC G+ RF G +H V+ G+ ++ + N LI MY K D+ K+
Sbjct: 73 SFSAVLNACACAGASYVRF--GATLHALVVVSGYLSSLPVANSLIDMYGKCLLPDDARKV 130
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FD+ N ++W + +A + ALELF+ M E + W ++ HAR G +
Sbjct: 131 FDETSDSNEVTWCSLMFAYANSCRLGVALELFRSMP----ERVVIAWNIMIVGHARRGEV 186
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
E + LF M + + +++ CA G ++HGFVIK G+ + VKN++
Sbjct: 187 EACLHLFKEMCGSLCQPDQWTFSALINACAVSMEMLYGCMVHGFVIKSGWSSAMEVKNSM 246
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ Y K A +F+ N VSWNA+I ++ + G +A F + + E
Sbjct: 247 LSFYAKLECQDDAMKVFNSFGCFNQVSWNAIIDAHMKLGDTQKAFLAFQK-------APE 299
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
R N++SW+++I + NG GE AL +F + V + + +L CA A L GR
Sbjct: 300 R-NIVSWTSMIAGYTRNGNGELALSMFLDLTRNSVQLDDLVAGAVLHACASLAILVHGRM 358
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+HG ++R ++K + V N L+NMY KCG ++ L F I KDLI+WNSM+ +G++G
Sbjct: 359 VHGCIIRHGLDKYLYVGNSLVNMYAKCGDIKGSRLAFHDILDKDLISWNSMLFAFGLHGR 418
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
A+ + EM+ +G KPD V F +L CSH GL++EG F M EF + M+H A
Sbjct: 419 ANEAICLYREMVASGVKPDEVTFTGLLMTCSHLGLISEGFAFFQSMCLEFGLSHGMDHVA 478
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEP--NAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
CMVD+LGR G + EA + + LL +C H + ++ + L
Sbjct: 479 CMVDMLGRGGYVAEARSLAEKYSKTSITRTNSCEVLLGACYAHGDLGTGSSVGEYLKNLE 538
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
E Y+LLSN+Y ASG+W +A VR + +G+KKV G SWIE++ ++ F SGN+
Sbjct: 539 PEKEVGYVLLSNLYCASGKWREAEMVRKAMLDQGVKKVPGSSWIEIRNEVTSFVSGNNAY 598
Query: 672 SDLKNVCEVLEELALQMEN 690
+ ++ ++L L L+M +
Sbjct: 599 PYMADISKILYFLELEMRH 617
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 181/384 (47%), Gaps = 40/384 (10%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP-----------FDCKSSSL 98
+H ++V+G +S +A ++ +Y + DAR VF+ F +S
Sbjct: 95 LHALVVVSGYLSSLPVANSLIDMYGKCLLPDDARKVFDETSDSNEVTWCSLMFAYANSCR 154
Query: 99 L-----------------WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
L WN ++ + G E L L+ +M D +TF +I A
Sbjct: 155 LGVALELFRSMPERVVIAWNIMIVGHARRGEVEACLHLFKEMCGSLCQPDQWTFSALINA 214
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C + +G +VH V++ G+ + + N ++ YAK+ D+ K+F+ N
Sbjct: 215 C----AVSMEMLYGCMVHGFVIKSGWSSAMEVKNSMLSFYAKLECQDDAMKVFNSFGCFN 270
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
+SWN + D A F++ E N V+WTS+++ + R G E + +F
Sbjct: 271 QVSWNAIIDAHMKLGDTQKAFLAFQKAP----ERNIVSWTSMIAGYTRNGNGELALSMFL 326
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
+ + +++ VL CA LA G+++HG +I+ G + Y++V N+L+ +Y K G
Sbjct: 327 DLTRNSVQLDDLVAGAVLHACASLAILVHGRMVHGCIIRHGLDKYLYVGNSLVNMYAKCG 386
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
D+K ++ F +I +K+++SWN+++ ++ G +EA+ ++ ++ S +P+ ++++
Sbjct: 387 DIKGSRLAFHDILDKDLISWNSMLFAFGLHGRANEAICLYREMV----ASGVKPDEVTFT 442
Query: 382 AVIGAFASNGRGEEALDLFRKMQL 405
++ + G E F+ M L
Sbjct: 443 GLLMTCSHLGLISEGFAFFQSMCL 466
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 103/250 (41%), Gaps = 68/250 (27%)
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
Y+F I + G + A+ LF EI K+ V+WNA++T+Y+ GL +++ +F +
Sbjct: 4 YLFRTTPKIVALARSGQISDARKLFDEIPHKDSVAWNAMLTAYSHVGLYQQSLSLFGCMR 63
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
S +P+ S+SAV+ A A CA +
Sbjct: 64 I----SHSKPDNFSFSAVLNACA---------------------------------CAGA 86
Query: 426 AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ------------- 472
+ + G +H VV ++ V N L++MY KC ++ VF++
Sbjct: 87 SYVRFGATLHALVVVSGYLSSLPVANSLIDMYGKCLLPDDARKVFDETSDSNEVTWCSLM 146
Query: 473 ------------------IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+ ++ +I WN MI G+ G E L F+EM + +PD
Sbjct: 147 FAYANSCRLGVALELFRSMPERVVIAWNIMIVGHARRGEVEACLHLFKEMCGSLCQPDQW 206
Query: 515 AFVAVLSACS 524
F A+++AC+
Sbjct: 207 TFSALINACA 216
Score = 42.7 bits (99), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C ++ L + VH +I G + ++ ++++YA+ G + +R F D
Sbjct: 343 VLHACASLAILVHGRMVHGCIIRHGLDKYLYVGNSLVNMYAKCGDIKGSRLAFH----DI 398
Query: 94 KSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
L+ WNS+L +G A+ LY +M GV D TF ++ C +G F
Sbjct: 399 LDKDLISWNSMLFAFGLHGRANEAICLYREMVASGVKPDEVTFTGLLMTCSHLGLISEGF 458
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
+F Q + L+ G + V ++ M + G ++++ L +K
Sbjct: 459 AFFQ---SMCLEFGLSHGMDHVACMVDMLGRGGYVAEARSLAEK 499
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 345 bits (884), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 200/660 (30%), Positives = 349/660 (52%), Gaps = 64/660 (9%)
Query: 4 SLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASA 63
SL H H+ P N + S + +N L LL++CK + LKQ+ Q+I+ G
Sbjct: 33 SLPH--HRDKPINWNSTHSFVLHNPLL-----SLLEKCKLLLHLKQIQAQMIINGLILDP 85
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPF--DCKSSSLL-WNSILRVNVSNGLYENALKLY 120
F ++R+++ F L ++R + + ++ ++ WN +R + + + LY
Sbjct: 86 FASSRLIA----FCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLY 141
Query: 121 VKMRKLGVL---GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNEL 177
+M + G D FT+P++ + C R S G ++ HVL++ + H+ N
Sbjct: 142 KQMLRHGCCESRPDHFTYPVLFKVC---ADLRLS-SLGHMILGHVLKLRLELVSHVHNAS 197
Query: 178 IGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNF 237
I M+A G M ++ K+FD+ V++
Sbjct: 198 IHMFASCGDMENARKVFDESPVRD-----------------------------------L 222
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
V+W L++ + + G E+ + ++ +M G++ + ++S C+ L + GK + +
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
V + G + + NAL+ ++ K GD+ A+ +F +E++ IVSW +I+ YA GL D +
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
++F +E+ D V+ W+A+IG RG++AL LF++MQ + + +T+
Sbjct: 343 RKLFDDMEEKD--------VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIH 394
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
LS C++ AL++G IH ++ + S++ N+ + L++MY KCG + E VF I+ ++
Sbjct: 395 CLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRN 454
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+T+ ++I G ++G A++ F EMI+AG PD + F+ +LSAC H G++ GR F
Sbjct: 455 SLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFS 514
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNT 597
M F + PQ++HY+ MVDLLGRAGLL+EA ++++MPME +A VWG LL CRMH N
Sbjct: 515 QMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNV 574
Query: 598 DVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
++ E A ++ L +G Y+LL +Y + WEDA + R +G++K+ G S IEV
Sbjct: 575 ELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEV 634
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 345 bits (884), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 212/711 (29%), Positives = 350/711 (49%), Gaps = 112/711 (15%)
Query: 10 HQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTI---HQLKQVHNQLIVTGANASAFLA 66
H+ +P+N + PF+ L+ C + H + +H I G A F++
Sbjct: 4 HRVAPNNYTFPFA---------------LKACSALADHHCGRAIHRHAIHAGLQADLFVS 48
Query: 67 ARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK--LYVKMR 124
+L +Y + L DA ++F T P + WN++L +G+Y +A+ L ++M+
Sbjct: 49 TALLDMYVKCACLPDAAHIFATMP---ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQ 105
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN----------VHIV 174
+ + T ++ G+ + G VH + ++ N V +
Sbjct: 106 MHRLRPNASTLVALLPLLAQQGAL----AQGTSVHAYCIRACLHPNRNSKSKLTDGVLLG 161
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
L+ MYAK G + + ++FD + +N
Sbjct: 162 TALLDMYAKCGSLLYARRVFDAMPARNE-------------------------------- 189
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE-VGAEAIAVVLSVCADLAADHMGKV 293
VTW++L+ C R+ + LF M +G+ + +IA L CA L MG+
Sbjct: 190 ---VTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQ 246
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
+H + K G H D + + N+L++ YA+AGL
Sbjct: 247 LHALLAKSGV----------------HAD---------------LTAGNSLLSMYAKAGL 275
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
D+A+ +F ++ D +S+SA++ + NGR EEA +F+KMQ V ++
Sbjct: 276 IDQAIALFDEMAVKD--------TVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAA 327
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
T+ L+ C+ AAL GR HG V+ + + N L++MY KCG ++ VF +
Sbjct: 328 TMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMM 387
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
+D+++WN+MI+GYG++GLG+ A A F EM GF PDGV F+ +LSACSH+GLV EG+
Sbjct: 388 PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGK 447
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRM 593
F +M + + P+MEHY CMVDLL R G L EA + +++MP+ + VW LL +CR+
Sbjct: 448 HWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 507
Query: 594 HKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
+KN D+ + ++ I L E TG+++LLSNIY+A+GR+++AA+VRI K +G KK G S
Sbjct: 508 YKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCS 567
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
WIE+ +H F G+ + L+ + + ++ G PD +L ++
Sbjct: 568 WIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDL 618
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 212/711 (29%), Positives = 350/711 (49%), Gaps = 112/711 (15%)
Query: 10 HQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTI---HQLKQVHNQLIVTGANASAFLA 66
H+ +P+N + PF+ L+ C + H + +H I G A F++
Sbjct: 119 HRVAPNNYTFPFA---------------LKACSALADHHCGRAIHRHAIHAGLQADLFVS 163
Query: 67 ARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK--LYVKMR 124
+L +Y + L DA ++F T P + WN++L +G+Y +A+ L ++M+
Sbjct: 164 TALLDMYVKCACLPDAAHIFATMP---ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQ 220
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN----------VHIV 174
+ + T ++ G+ + G VH + ++ N V +
Sbjct: 221 MHRLRPNASTLVALLPLLAQQGAL----AQGTSVHAYCIRACLHPNRNSKSKLTDGVLLG 276
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
L+ MYAK G + + ++FD + +N
Sbjct: 277 TALLDMYAKCGSLLYARRVFDAMPARNE-------------------------------- 304
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE-VGAEAIAVVLSVCADLAADHMGKV 293
VTW++L+ C R+ + LF M +G+ + +IA L CA L MG+
Sbjct: 305 ---VTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQ 361
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
+H + K G H D + + N+L++ YA+AGL
Sbjct: 362 LHALLAKSGV----------------HAD---------------LTAGNSLLSMYAKAGL 390
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
D+A+ +F ++ D +S+SA++ + NGR EEA +F+KMQ V ++
Sbjct: 391 IDQAIALFDEMAVKD--------TVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAA 442
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
T+ L+ C+ AAL GR HG V+ + + N L++MY KCG ++ VF +
Sbjct: 443 TMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMM 502
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
+D+++WN+MI+GYG++GLG+ A A F EM GF PDGV F+ +LSACSH+GLV EG+
Sbjct: 503 PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGK 562
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRM 593
F +M + + P+MEHY CMVDLL R G L EA + +++MP+ + VW LL +CR+
Sbjct: 563 HWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 622
Query: 594 HKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
+KN D+ + ++ I L E TG+++LLSNIY+A+GR+++AA+VRI K +G KK G S
Sbjct: 623 YKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCS 682
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
WIE+ +H F G+ + L+ + + ++ G PD +L ++
Sbjct: 683 WIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDL 733
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 167/409 (40%), Gaps = 90/409 (22%)
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA--LELFKRMELEGLEPNFVTWTS 242
G +S + LFD++ + ++N + ++ + A L L++RM + PN T+
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP- 129
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
L C+ LA H G+ IH I G
Sbjct: 130 ----------------------------------FALKACSALADHHCGRAIHRHAIHAG 155
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
+ +FV AL+ +Y K + A ++F+ + +++V+WNA++ YA G+ AV
Sbjct: 156 LQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAV---- 211
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
A L +MQ+ ++ N+ T+ LL +
Sbjct: 212 ---------------------------------AHLLSMQMQMHRLRPNASTLVALLPLL 238
Query: 423 AESAALNIGREIHGHVVRVSMNKN----------ILVQNGLLNMYMKCGCLEEGHLVFEQ 472
A+ AL G +H + +R ++ N +L+ LL+MY KCG L VF+
Sbjct: 239 AQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDA 298
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG---FKPDGVAFVAVLSACSHAGLV 529
+ ++ +TW+++I G+ + A F+ M+ G P +A + L AC+ +
Sbjct: 299 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHL 356
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
G ++ ++ + + + ++ + +AGL+ +A + M ++
Sbjct: 357 RMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK 404
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 372 MERPNVISWSAVIGAFASNGR--GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
+ P+V +++ +I A++S+ + L L+R+M +V N+ T L C+ A +
Sbjct: 83 IPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHH 142
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
GR IH H + + ++ V LL+MY+KC CL + +F + +DL+ WN+M++GY
Sbjct: 143 CGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYA 202
Query: 490 MNGLGENALATF--EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
+G+ +A+A +M +P+ VA+L + G + +G + +R + P
Sbjct: 203 HHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRAC-LHP 261
Query: 548 QMEHYA----------CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS----CRM 593
+ ++D+ + G L A + MP N W L+ RM
Sbjct: 262 NRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEVTWSALIGGFVLCSRM 320
Query: 594 HKNTDVAEAMASQIFGLITETT 615
+ + +AM +Q ++ T+
Sbjct: 321 TQAFLLFKAMLAQGLCFLSPTS 342
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 212/711 (29%), Positives = 350/711 (49%), Gaps = 112/711 (15%)
Query: 10 HQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTI---HQLKQVHNQLIVTGANASAFLA 66
H+ +P+N + PF+ L+ C + H + +H I G A F++
Sbjct: 4 HRVAPNNYTFPFA---------------LKACSALADHHCGRAIHRHAIHAGLQADLFVS 48
Query: 67 ARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK--LYVKMR 124
+L +Y + L DA ++F T P + WN++L +G+Y +A+ L ++M+
Sbjct: 49 TALLDMYVKCACLPDAAHIFATMP---ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQ 105
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN----------VHIV 174
+ + T ++ G+ + G VH + ++ N V +
Sbjct: 106 MHRLRPNASTLVALLPLLAQQGAL----AQGTSVHAYCIRACLHPNRNSKSKLTDGVLLG 161
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
L+ MYAK G + + ++FD + +N
Sbjct: 162 TALLDMYAKCGSLLYARRVFDAMPARNE-------------------------------- 189
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE-VGAEAIAVVLSVCADLAADHMGKV 293
VTW++L+ C R+ + LF M +G+ + +IA L CA L MG+
Sbjct: 190 ---VTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQ 246
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
+H + K G H D + + N+L++ YA+AGL
Sbjct: 247 LHALLAKSGV----------------HAD---------------LTAGNSLLSMYAKAGL 275
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
D+A+ +F ++ D +S+SA++ + NGR EEA +F+KMQ V ++
Sbjct: 276 IDQAIALFDEMAVKD--------TVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAA 327
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
T+ L+ C+ AAL GR HG V+ + + N L++MY KCG ++ VF +
Sbjct: 328 TMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMM 387
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
+D+++WN+MI+GYG++GLG+ A A F EM GF PDGV F+ +LSACSH+GLV EG+
Sbjct: 388 PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGK 447
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRM 593
F +M + + P+MEHY CMVDLL R G L EA + +++MP+ + VW LL +CR+
Sbjct: 448 HWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 507
Query: 594 HKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
+KN D+ + ++ I L E TG+++LLSNIY+A+GR+++AA+VRI K +G KK G S
Sbjct: 508 YKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCS 567
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
WIE+ +H F G+ + L+ + + ++ G PD +L ++
Sbjct: 568 WIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDL 618
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 227/770 (29%), Positives = 353/770 (45%), Gaps = 163/770 (21%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
++Q+H + I +G +S F+ ++ +Y + G L A+ VFE S+ W +++
Sbjct: 183 VEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLK---ARDSVSWVAMISG 239
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
NG E A+ L+ + +V+ AC F F FG+ +H VL+ G
Sbjct: 240 LSQNGYEEEAMLLFCQ--------------IVLSACT---KVEF-FEFGKQLHGLVLKQG 281
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F ++ N L+ +Y++ G +S + ++F + ++ +S+N + SG A + AL LFK
Sbjct: 282 FSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFK 341
Query: 227 RMELEGLEPNFVTWTSLLSSHARCG----------------------------------- 251
+M L+ +P+ VT SLLS+ A G
Sbjct: 342 KMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCS 401
Query: 252 ----------------RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
L ++ +F M+ GI +L C L A +G+ IH
Sbjct: 402 DIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIH 461
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVK------------------------------- 324
V+K GF+ V+V + LI +Y KHG +
Sbjct: 462 TQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFT 521
Query: 325 VAQNLFSEIEEKNIVS---------------------------------------WNALI 345
A NLF E++++ I S NAL+
Sbjct: 522 EALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALV 581
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+ YA G EA F Q+ D +SW++++ FA +G EEAL++F +M
Sbjct: 582 SLYARCGKVREAYAAFDQIYAKDN--------VSWNSLVSGFAQSGYFEEALNIFAQMNK 633
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
A + NS T +S A A + IG++IHG + + + V N L+ +Y KCG +++
Sbjct: 634 AGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD 693
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
I+WNSMI+GY +G G AL FE+M + P+ V FV VLSACSH
Sbjct: 694 -------------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSH 740
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
GLV+EG F M + P+ EHYAC+VDLLGR+GLL A V+ MP++P+A VW
Sbjct: 741 VGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWR 800
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
TLL++C +HKN D+ E AS + L + + +Y+L+SN+YA SG+W+ + R K +G
Sbjct: 801 TLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRG 860
Query: 646 LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
+KK G+SW+EV +H F +G+ + E L L + G VP
Sbjct: 861 VKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVP 910
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 156/653 (23%), Positives = 279/653 (42%), Gaps = 148/653 (22%)
Query: 68 RVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG 127
+++ Y FG L A NVF+ P S WN I ++ L L+ +M
Sbjct: 102 KLIDFYLAFGDLNCAVNVFDEMPIRSLSC---WNRIFNTFIAERLMGRVPGLFRRMLTKN 158
Query: 128 VLGDGFTFPLVIRACKFMG-SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ 186
V D F +V+R C SFRF + +H + GF+ + I N LI +Y K G
Sbjct: 159 VEFDERIFAVVLRGCSGNAVSFRFV----EQIHAKTITSGFESSTFICNPLIDLYFKNGF 214
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
+S + K+F+ ++ ++ +SW M SG + N
Sbjct: 215 LSSAKKVFENLKARDSVSWVAMISGLSQN------------------------------- 243
Query: 247 HARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY 306
G EE M LF +VLS C + GK +HG V+K GF
Sbjct: 244 ----GYEEEAMLLF--------------CQIVLSACTKVEFFEFGKQLHGLVLKQGFSSE 285
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
+V NAL+ +Y + G++ A+ +F + +++ VS+N+LI+ A+ G + A+ +F ++
Sbjct: 286 TYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKM-N 344
Query: 367 LDGGSMERPNVISWSAVIGAFAS-----NGRG---------------------------- 393
LD ++P+ ++ ++++ A AS NG+
Sbjct: 345 LD---CQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCS 401
Query: 394 ------------------EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH 435
++ +F +MQ+ +V N T +L C A ++G +IH
Sbjct: 402 DIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIH 461
Query: 436 GHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
V++ N+ V + L++MY K G L+ +F ++++ D+++W +MI+GY +
Sbjct: 462 TQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFT 521
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF---------------DMMV 540
AL F+EM + G K D + F + +SAC+ +++GR+I + +V
Sbjct: 522 EALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALV 581
Query: 541 REF-RIEPQMEHYAC--------------MVDLLGRAGLLQEASDIVKNM---PMEPNAY 582
+ R E YA +V ++G +EA +I M +E N++
Sbjct: 582 SLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSF 641
Query: 583 VWGTLLNSCRMHKNTDVAEAMASQI--FGLITETTGSYMLLSNIYAASGRWED 633
+G+ +++ N + + + I G +ET S L++ +YA G +D
Sbjct: 642 TFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALIT-LYAKCGTIDD 693
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 20/224 (8%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
+ + Q +Q+H Q ++G + + ++S+YAR G++ +A F+ ++ WN
Sbjct: 553 QALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIY---AKDNVSWN 609
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
S++ +G +E AL ++ +M K G+ + FTF + A + + R G+ +H
Sbjct: 610 SLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVR----IGKQIHGM 665
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
+ + G+ + N LI +YAK G + D ISWN M +G++ + A
Sbjct: 666 IRKTGYDSETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQHGCGFEA 712
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
L+LF+ M+ + PN VT+ +LS+ + G ++E + F M +
Sbjct: 713 LKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSE 756
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 212/711 (29%), Positives = 350/711 (49%), Gaps = 112/711 (15%)
Query: 10 HQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTI---HQLKQVHNQLIVTGANASAFLA 66
H+ +P+N + PF+ L+ C + H + +H I G A F++
Sbjct: 119 HRVAPNNYTFPFA---------------LKACSALADHHCGRAIHRHAIHAGLQADLFVS 163
Query: 67 ARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK--LYVKMR 124
+L +Y + L DA ++F T P + WN++L +G+Y +A+ L ++M+
Sbjct: 164 TALLDMYVKCACLPDAAHIFATMP---ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQ 220
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN----------VHIV 174
+ + T ++ G+ + G VH + ++ N V +
Sbjct: 221 MHRLRPNASTLVALLPLLAQQGAL----AQGTSVHAYRIRACLHSNRNSKSKLTDGVLLG 276
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
L+ MYAK G + + ++FD + +N
Sbjct: 277 TALLDMYAKCGSLLYARRVFDAMPARNE-------------------------------- 304
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE-VGAEAIAVVLSVCADLAADHMGKV 293
VTW++L+ C R+ + LF M +G+ + +IA L CA L MG+
Sbjct: 305 ---VTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQ 361
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
+H + K G H D + + N+L++ YA+AGL
Sbjct: 362 LHALLAKSGV----------------HAD---------------LTAGNSLLSMYAKAGL 390
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
D+A+ +F ++ D +S+SA++ + NGR EEA +F+KMQ V ++
Sbjct: 391 IDQAIALFDEMAVKD--------TVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAA 442
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
T+ L+ C+ AAL GR HG V+ + + N L++MY KCG ++ VF +
Sbjct: 443 TMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMM 502
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
+D+++WN+MI+GYG++GLG+ A A F EM GF PDGV F+ +LSACSH+GLV EG+
Sbjct: 503 PSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGK 562
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRM 593
F +M + + P+MEHY CMVDLL R G L EA + +++MP+ + VW LL +CR+
Sbjct: 563 HWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 622
Query: 594 HKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
+KN D+ + ++ I L E TG+++LLSNIY+A+GR+++AA+VRI K +G KK G S
Sbjct: 623 YKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCS 682
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
WIE+ +H F G+ + L+ + + ++ G PD +L ++
Sbjct: 683 WIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQPDTSFVLQDL 733
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 167/409 (40%), Gaps = 90/409 (22%)
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA--LELFKRMELEGLEPNFVTWTS 242
G +S + LFD++ + ++N + ++ + A L L++RM + PN T+
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP- 129
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
L C+ LA H G+ IH I G
Sbjct: 130 ----------------------------------FALKACSALADHHCGRAIHRHAIHAG 155
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
+ +FV AL+ +Y K + A ++F+ + +++V+WNA++ YA G+ AV
Sbjct: 156 LQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAV---- 211
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
A L +MQ+ ++ N+ T+ LL +
Sbjct: 212 ---------------------------------AHLLSMQMQMHRLRPNASTLVALLPLL 238
Query: 423 AESAALNIGREIHGHVVRVSMNKN----------ILVQNGLLNMYMKCGCLEEGHLVFEQ 472
A+ AL G +H + +R ++ N +L+ LL+MY KCG L VF+
Sbjct: 239 AQQGALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDA 298
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG---FKPDGVAFVAVLSACSHAGLV 529
+ ++ +TW+++I G+ + A F+ M+ G P +A + L AC+ +
Sbjct: 299 MPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASLDHL 356
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
G ++ ++ + + + ++ + +AGL+ +A + M ++
Sbjct: 357 RMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK 404
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 123/261 (47%), Gaps = 18/261 (6%)
Query: 372 MERPNVISWSAVIGAFASNGR--GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
+ P+V +++ +I A++S+ + L L+R+M +V N+ T L C+ A +
Sbjct: 83 IPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPFALKACSALADHH 142
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
GR IH H + + ++ V LL+MY+KC CL + +F + +DL+ WN+M++GY
Sbjct: 143 CGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYA 202
Query: 490 MNGLGENALATF--EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR------ 541
+G+ +A+A +M +P+ VA+L + G + +G + +R
Sbjct: 203 HHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSN 262
Query: 542 ---EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS----CRMH 594
+ ++ + ++D+ + G L A + MP N W L+ RM
Sbjct: 263 RNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPAR-NEVTWSALIGGFVLCSRMT 321
Query: 595 KNTDVAEAMASQIFGLITETT 615
+ + +AM +Q ++ T+
Sbjct: 322 QAFLLFKAMLAQGLCFLSPTS 342
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 226/764 (29%), Positives = 365/764 (47%), Gaps = 127/764 (16%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K +H + T + V+ Y + G + DAR VF+ +LWN+++
Sbjct: 80 KSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMS---DRDVVLWNAMVYGY 136
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG- 166
V G YE A+ L +M + + + T ++ AC+ R G+ VH + L+ G
Sbjct: 137 VGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRL----GRGVHGYCLRNGM 192
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF-------------- 212
F N H+ LIG Y + M LFD + V+N +SWN M SG+
Sbjct: 193 FDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFV 251
Query: 213 -----ALNFDCD------------GALELFKRMELEGLEPNFVT---------------- 239
+ FDC G+L+L K++ ++ FV
Sbjct: 252 QMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNG 311
Query: 240 -------------------WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
W S++S++A G EE MDLF M+ G++ + ++LS
Sbjct: 312 SLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLS 371
Query: 281 VCADLAADHM-GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
+C +LA+ + GK +H VIK G + NAL+ +Y + V+ Q +F ++ +I+
Sbjct: 372 MCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDII 431
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA------------- 386
SWN +I + A L +A E+F ++ + S +PN + +++ A
Sbjct: 432 SWNTMILALARNTLRAQACELFERMRE----SEIKPNSYTIISILAACEDVTCLDFGRSI 487
Query: 387 ----------------------FASNGRGEEALDLFR----------KMQLAKVVANSVT 414
+ + G A DLF + K NSVT
Sbjct: 488 HGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIXKAEPNSVT 547
Query: 415 ISGLLSVCAESAALNIGREIHGHVVR--VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
I +LS A L G+ +H +V R S+ ++ + N + MY +CG L+ +F+
Sbjct: 548 IINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKT 607
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+ K+++I+WN+MI+GYGMNG G +A+ F +M+E GF+P+GV FV+VLSACSH+G + G
Sbjct: 608 LPKRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMG 667
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
++F MV++F + P++ HY+C+VDLL R G + EA + + +MP+EP+A VW LL+SCR
Sbjct: 668 LQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCR 727
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
+ + A+ + ++ L G+Y+LLSN+YA +G W + ++R K KGL+K G
Sbjct: 728 AYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGI 787
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
SWI VK ++H FS+G+ + L L M G PD
Sbjct: 788 SWIIVKNQVHCFSAGDRSHPQSDKIYAKLSILLSSMRETGYDPD 831
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 136/547 (24%), Positives = 235/547 (42%), Gaps = 117/547 (21%)
Query: 100 WNSILR--VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
WNS+++ N+ N + L Y +M LGVL + T PLV++AC + G+
Sbjct: 28 WNSVIKHQANLKND--QAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVE----RGKS 81
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H + +V + ++ Y K G + D+ +FD + ++ + WN M G+ + +
Sbjct: 82 IHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGY-VGWG 140
Query: 218 C-DGALELFKRMELEGLEPNFVTWTSLL-----SSHARCGR------------------- 252
C + A+ L + M E L PN T +LL +S R GR
Sbjct: 141 CYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVA 200
Query: 253 -------LEETMD----LFDMMRKRGI-----------------------------EVGA 272
L M LFD+M R I EV
Sbjct: 201 TALIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKF 260
Query: 273 EAIAVVLSV--CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+ + ++++V CA+L + +GK IH IK F + +++ NAL+ +Y +G ++ + LF
Sbjct: 261 DCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLF 320
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+ ++ WN++I++YA G +EA
Sbjct: 321 ESVPNRDAPLWNSMISAYAAFGCHEEA--------------------------------- 347
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA-LNIGREIHGHVVRVSMNKNILV 449
+DLF +MQ V + T+ +LS+C E A+ L G+ +H HV++ M + +
Sbjct: 348 ------MDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASL 401
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
N LL+MY + C+E +F++++ D+I+WN+MI N L A FE M E+
Sbjct: 402 GNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEI 461
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
KP+ +++L+AC ++ GR I +++ IE + D+ G A
Sbjct: 462 KPNSYTIISILAACEDVTCLDFGRSIHGYVMKH-SIEINQPLRTALADMYMNCGDEATAR 520
Query: 570 DIVKNMP 576
D+ + P
Sbjct: 521 DLFEGCP 527
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 216/718 (30%), Positives = 359/718 (50%), Gaps = 53/718 (7%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L CK I L+ Q+H ++ G ++ ++ ++S+Y G L A ++F
Sbjct: 274 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMS 333
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ ++ +N+++ G E A++L+ +M+ G+ D T ++ AC G+
Sbjct: 334 ---QRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTL-- 388
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
FS GQ +H + ++GF N I L+ +YAK + + F + V+N + WN+M
Sbjct: 389 -FS-GQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLV 446
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
+ L D + +F++M++E + PN T+ S+L + R G LE + + K ++
Sbjct: 447 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQL 506
Query: 271 GAEAIAVVLSVCA-----DLAADHM----GK-VIHGFVIKGGFEDYVFVKNALICVY--- 317
A +V++ + A D A D + GK V+ + G+ Y F AL
Sbjct: 507 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 566
Query: 318 --GKHGDVKVAQNLFS------------EIEEKNIVS--------WNALITSYAEAGLCD 355
G D N S +I + VS NAL+T Y++ G +
Sbjct: 567 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIE 626
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
EA F Q E D I+W+A++ F +G EEAL +F +M + +N+ T
Sbjct: 627 EAYLAFEQTEAGDN--------IAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTF 678
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
+ +E+A + G+++H + + + V N +++MY KCG + + F ++
Sbjct: 679 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSM 738
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
K+ ++WN+MI+ Y +G G AL +F++MI + +P+ V V VLSACSH GLV++G
Sbjct: 739 KNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEY 798
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
F+ M E+ + P+ EHY C+VD+L RAGLL A D + MP+EP+A VW TLL++C +HK
Sbjct: 799 FESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHK 858
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
N ++ E A + L E + +Y+LLSN+YA +W+ R K KG+KK GQSWI
Sbjct: 859 NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWI 918
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRI 713
EVK IH F G+ + E ++L + G V D +L E+ ++ I
Sbjct: 919 EVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTI 976
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 144/601 (23%), Positives = 265/601 (44%), Gaps = 114/601 (18%)
Query: 37 LLQQC----KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
LL+ C ++ + +++H+Q++ G + +A L+ ++L Y G L A VF+ P
Sbjct: 73 LLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMP-- 130
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ + WN +++ S L L+ +M V + TF V+ AC+ GS F
Sbjct: 131 -ERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACR-GGSVAFDV 188
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
+ +H ++ G + + N LI +Y++ G + + ++FD + +K++ SW M SG
Sbjct: 189 V--EQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGL 246
Query: 213 ALNFDCD-GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+ N +C+ A+ LF M + G+ P ++S
Sbjct: 247 SKN-ECEVEAIRLFCDMYVLGIMPTPYAFSS----------------------------- 276
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
VLS C + + +G+ +HG V+K GF +V NAL+ +Y G + A+++FS
Sbjct: 277 ------VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFS 330
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFS--QLEKL----------------DGGSME 373
+ +++ V++N LI ++ G ++A+E+F QL+ L DG
Sbjct: 331 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFS 390
Query: 374 RPNVISWSAVIGAFASNGR--------------GEEALDLFRKMQLAKVV---------- 409
+ +++ +G FASN + E AL+ F + ++ VV
Sbjct: 391 GQQLHAYTTKLG-FASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYG 449
Query: 410 ---------------------ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
N T +L C L +G +IH +++ S N
Sbjct: 450 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAY 509
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
V + L++MY K G L+ + + KD+++W +MI+GY + AL TF +M++ G
Sbjct: 510 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 569
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIF-DMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
+ D V +SAC+ + EG++I V F + ++ +V L + G ++E
Sbjct: 570 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN--ALVTLYSKCGNIEE 627
Query: 568 A 568
A
Sbjct: 628 A 628
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 120/520 (23%), Positives = 214/520 (41%), Gaps = 109/520 (20%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ +H+ +L++GF N + +L+ Y G + + K+FD++ + +WN M A
Sbjct: 87 GRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELAS 146
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
LF RM E + PN T++ +L + C RG G+ A
Sbjct: 147 RSLSGKVFCLFGRMVNENVTPNEGTFSGVLEA---C---------------RG---GSVA 185
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
VV + IH +I G K+ ++C
Sbjct: 186 FDVV-------------EQIHARIIYQGLG-----KSTIVC------------------- 208
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
N LI Y+ G D A VF L D S W A+I + N
Sbjct: 209 -------NPLIDLYSRNGFVDRARRVFDGLYLKDHSS--------WVAMISGLSKNECEV 253
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
EA+ LF M + ++ S +LS C + +L IG ++HG V+++ + + V N L+
Sbjct: 254 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 313
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
++Y G L +F + ++D +T+N++I+G G GE A+ F+ M G +PD
Sbjct: 314 SLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSN 373
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVR---------------------------EFRIEP 547
+++ ACS G + G+++ + + +E
Sbjct: 374 TLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLET 433
Query: 548 QMEHYACMVDLLGRAGLLQEASD---IVKNMPME---PNAYVWGTLLNSCRMHKNTDVAE 601
++E+ +L GLL + + I + M +E PN Y + ++L +C + ++ E
Sbjct: 434 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 493
Query: 602 AMASQIFGLITETTGSYM--LLSNIYAASGRWEDAAKVRI 639
+ SQI + +Y+ +L ++YA G+ + A + I
Sbjct: 494 QIHSQIIK-TSFQLNAYVCSVLIDMYAKLGKLDTAWDILI 532
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 98/244 (40%), Gaps = 49/244 (20%)
Query: 408 VVANSVTISGLLSVCAES-AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
+ N T+ LL C ++ +L+ GR++H ++++ + N + LL+ Y+ G L+
Sbjct: 63 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGA 122
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC--- 523
VF+++ ++ + TWN MI L F M+ P+ F VL AC
Sbjct: 123 LKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGG 182
Query: 524 ---------------------------------SHAGLVNEGRRIFDMMVREFRIEPQME 550
S G V+ RR+FD + +
Sbjct: 183 SVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLK-----DHS 237
Query: 551 HYACMVDLLGRAGLLQEASDIVKNM---PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
+ M+ L + EA + +M + P Y + ++L++C+ ++ ++ E Q+
Sbjct: 238 SWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE----QL 293
Query: 608 FGLI 611
GL+
Sbjct: 294 HGLV 297
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 206/627 (32%), Positives = 328/627 (52%), Gaps = 57/627 (9%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVL--SIYARFGRLFDARNVFETAPFDCK 94
LL+ CK++ QLKQ+ + G + +++ S+ + G A +F
Sbjct: 14 LLKSCKSMSQLKQIQAHIFCFGLQQDRDILNKLMAFSMDSSLGDFNYANRIFNHIH---H 70
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
S ++N +++ V G +A+ L+ ++R+ GV D +T+P V++ +G R
Sbjct: 71 PSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGEVRE---- 126
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ +H V++ G + + ++ N L+ MYA++G + GF
Sbjct: 127 GEKIHAFVVKTGLEFDPYVCNSLMDMYAELG----------------------LVEGFT- 163
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
++F+ M E + V+W ++S + RC R EE +D++ M+ E EA
Sbjct: 164 --------QVFEEMP----ERDAVSWNIMISGYVRCKRFEEAVDVYRRMQMESNEKPNEA 211
Query: 275 IAV-VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
V LS CA L +GK IH + I + + NAL+ +Y K G V VA+ +F +
Sbjct: 212 TVVSTLSACAVLRNLELGKEIHDY-IANELDLTPIMGNALLDMYCKCGCVSVAREIFDAM 270
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
KN+ W +++T Y G D+A +F + D V+ W+A+I +
Sbjct: 271 IVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRD--------VVLWTAMINGYVQFNHF 322
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
E+A+ LF +MQ+ V + + LL+ CA+ AL G+ IH ++ + + +V L
Sbjct: 323 EDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVVSTAL 382
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
+ MY KCGC+E+ +F ++ D +W S+I G MNG AL FE M G KPD
Sbjct: 383 IEMYAKCGCIEKSLEIFNGLKDMDTTSWTSIICGLAMNGKTSEALELFEAMQTCGLKPDD 442
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
+ FVAVLSAC HAGLV EGR++F M + IEP +EHY C +DLLGRAGLLQEA ++VK
Sbjct: 443 ITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEHYGCFIDLLGRAGLLQEAEELVK 502
Query: 574 NMPMEPNAYV---WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
+P + N + +G LL++CR + N D+ E +A+ + + + + + LL++IYA++ R
Sbjct: 503 KLPDQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTLLASIYASADR 562
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEV 657
WED KVR K G+KKV G S IEV
Sbjct: 563 WEDVRKVRSKMKDLGIKKVPGYSAIEV 589
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 120/236 (50%), Gaps = 15/236 (6%)
Query: 28 NSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
N+LLD + +C + +++ + +IV N +++ Y G+L AR +FE
Sbjct: 248 NALLDMY----CKCGCVSVAREIFDAMIVKNVNC----WTSMVTGYVICGQLDQARYLFE 299
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
+P +LW +++ V +E+A+ L+ +M+ GV D F ++ C +G+
Sbjct: 300 RSP---SRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGA 356
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
G+ +HN++ + + + + LI MYAK G + S ++F+ ++ + SW
Sbjct: 357 LEQ----GKWIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDTTSWTS 412
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
+ G A+N ALELF+ M+ GL+P+ +T+ ++LS+ G +EE LF M
Sbjct: 413 IICGLAMNGKTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSM 468
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 182/463 (39%), Positives = 275/463 (59%), Gaps = 12/463 (2%)
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH---MGKVI 294
V+WT+ ++ + + G L + F MR+ IE +LS CA + G I
Sbjct: 57 VSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTAI 116
Query: 295 HGFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
H V K G + + V V ALI +Y K G V+ A+ F ++ +N+VSWN +I Y G
Sbjct: 117 HAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNGK 176
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
++A++VF DG + N ISW+A+IG F EEAL+ FR+MQL+ V + V
Sbjct: 177 FEDALQVF------DG--LPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYV 228
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
T+ +++ CA L +G +H V+ N+ V N L++MY +CGC++ VF+++
Sbjct: 229 TVIAVIAACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRM 288
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
++ L++WNS+I G+ +NGL + AL+ F M E GFKPDGV++ L ACSHAGL+ EG
Sbjct: 289 PQRTLVSWNSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGL 348
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRM 593
RIF+ M R RI P++EHY C+VDL RAG L+EA +++KNMPM+PN + G+LL +CR
Sbjct: 349 RIFEHMKRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRT 408
Query: 594 HKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
N +AE + + + L + +Y+LLSNIYAA G+W+ A KVR K +G++K G S
Sbjct: 409 QGNIGLAENVMNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFS 468
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
IE+ IH F SG+ + ++ LE L+ +++ G +PD
Sbjct: 469 SIEIDSSIHKFVSGDKSHEEKDHIYAALEFLSFELQLCGYIPD 511
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 181/375 (48%), Gaps = 41/375 (10%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
W + + +G A +V+MR+ + + TF ++ AC S R SFG +H
Sbjct: 59 WTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPS-RSSISFGTAIH 117
Query: 160 NHVLQMGFQGN-VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
HV ++G N V + LI MYAK G++ + FD++ V+N +SWN M G+ N
Sbjct: 118 AHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNGKF 177
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
+ AL++F + ++ N ++WT+L+ + EE ++ F M+ G+ + V
Sbjct: 178 EDALQVFDGLPVK----NAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAV 233
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
++ CA+L +G +H V+ F + V V N+LI +Y + G + +A+ +F + ++ +
Sbjct: 234 IAACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTL 293
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLE----KLDGGS----------------------- 371
VSWN++I +A GL DEA+ F+ ++ K DG S
Sbjct: 294 VSWNSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFEH 353
Query: 372 MER-----PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
M+R P + + ++ ++ GR EEAL++ + M + N V + LL+ C
Sbjct: 354 MKRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMK---PNEVILGSLLAACRTQG 410
Query: 427 ALNIGREIHGHVVRV 441
+ + + +++ +
Sbjct: 411 NIGLAENVMNYLIEL 425
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 117/236 (49%), Gaps = 38/236 (16%)
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE---SAALNIGRE 433
++SW+ I + +G +A F +M+ A + N +T LLS CA ++++ G
Sbjct: 56 IVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTA 115
Query: 434 IHGHVVRVSMNKN-ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
IH HV ++ ++ N ++V L++MY KCG +E L F+Q+ ++L++WN+MI GY NG
Sbjct: 116 IHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNG 175
Query: 493 LGENALATFE-------------------------------EMIEAGFKPDGVAFVAVLS 521
E+AL F+ EM +G PD V +AV++
Sbjct: 176 KFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIA 235
Query: 522 ACSHAGLVNEGRRIFDM-MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
AC++ G + G + + M ++FR ++ + ++D+ R G + A + MP
Sbjct: 236 ACANLGTLGLGLWVHRLVMTQDFRNNVKVSN--SLIDMYSRCGCIDLARQVFDRMP 289
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 35/145 (24%)
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA----------- 526
+++W + I+ Y +G A + F +M EA +P+ + F+ +LSAC+H
Sbjct: 56 IVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTA 115
Query: 527 --------GL-VNE---GRRIFDMMVREFRIEP-----------QMEHYACMVDLLGRAG 563
GL +N+ G + DM + R+E + + M+D R G
Sbjct: 116 IHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNG 175
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLL 588
++A + +P++ NA W L+
Sbjct: 176 KFEDALQVFDGLPVK-NAISWTALI 199
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++ +Y+R G + AR VF+ P + + + WNSI+ NGL + AL + M++ G
Sbjct: 268 LIDMYSRCGCIDLARQVFDRMP---QRTLVSWNSIIVGFAVNGLADEALSYFNSMQEEGF 324
Query: 129 LGDGFTFPLVIRACKFMG 146
DG ++ + AC G
Sbjct: 325 KPDGVSYTGALMACSHAG 342
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 240/757 (31%), Positives = 374/757 (49%), Gaps = 121/757 (15%)
Query: 25 TYNNSLLDCFDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFD 81
T+NN L+ LL+QC K H K +H++L + L ++++Y++
Sbjct: 47 THNNKLITS-SLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPIT 105
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR-KLGVLGDGFTFPLVIR 140
A ++F++ + K + ++SI+ +N A++++ ++ + GV + + F VIR
Sbjct: 106 AFSIFQSME-NSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIR 164
Query: 141 ACKFMGSFRFRFSFGQIVHNHVLQMG-FQGNVHIVNELIGMYAKMGQMSD---SFKLFDK 196
AC G F F G + VL+ G F +V + ELI M+ K ++D + K+FDK
Sbjct: 165 AC-LKGGF---FKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDK 220
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMEL-EGLEPNFVTWTSLLSSHARCGRLEE 255
+R KN ++W +M + A D A++LF M + G P+ T T L
Sbjct: 221 MREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGL------------ 268
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
+SVCA++ +GK +H +VI+ G + V +L+
Sbjct: 269 -----------------------ISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVD 305
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE--AGLCDEAVEVFSQLEKLDGGSME 373
+Y K G V+ A+ +F + E N++SW AL+ Y G EA+ +FS + L GG
Sbjct: 306 MYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNM-LLQGGVA- 363
Query: 374 RPNVISWSAVIGA-----------------------------------FASNGRGEEALD 398
PN ++S V+ A +A +GR E A
Sbjct: 364 -PNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARK 422
Query: 399 ----LFRKMQLAKVVAN---------------------------SVTISGLLSVCAESAA 427
LF K +++ V + S T + LLS A
Sbjct: 423 CFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGT 482
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
+ G +IH VV++ ++ V N L++MY KCG E VF +E ++ITW S+I+G
Sbjct: 483 IGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIING 542
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
+ +G AL F M+E G KP+ V ++AVLSACSH GL++E + F M I P
Sbjct: 543 FAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVP 602
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
+MEHYACMVDLLGR+GLL EA + + +MP + +A VW T L SCR+H+NT + E A I
Sbjct: 603 RMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMI 662
Query: 608 FGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG 667
+Y+LLSN+YA GRWED A +R + K K + K AG SWIEV+ ++H F G
Sbjct: 663 LEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVG 722
Query: 668 NSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
++L + + E L+ELAL+++N G VP+ D +L ++
Sbjct: 723 DTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDV 759
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 198/671 (29%), Positives = 345/671 (51%), Gaps = 56/671 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARF-----GRLFDARNVFETAPF 91
LL CKT+ +KQ+H Q++ + + S L +++ L A ++F P
Sbjct: 18 LLASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFSHIP- 76
Query: 92 DCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR 151
+ N +LR EN L LY+ +R+ G D F+FP +++A + +
Sbjct: 77 --NPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSAL--- 131
Query: 152 FSFGQIVHNHVLQMGF-QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+ G +H + GF + I + LI MYA G++ D+ LFDK+ ++ ++WN+
Sbjct: 132 -NLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNI--- 187
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
++ +++ + + L++ M+ G E
Sbjct: 188 --------------------------------MIDGYSQNAHYDHVLKLYEEMKTSGTEP 215
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
A + VLS CA GK IH F+ GF ++ +L+ +Y G + +A+ ++
Sbjct: 216 DAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVY 275
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
++ K++V A+++ YA+ G+ +A +F ++ + D ++ WSA+I +A +
Sbjct: 276 DQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKD--------LVCWSAMISGYAES 327
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
+ EAL LF +MQ ++V + +T+ ++S CA AL + IH + + + + +
Sbjct: 328 YQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPIN 387
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
N L++MY KCG L + VFE + +K++I+W+SMI+ + M+G ++A+A F M E +
Sbjct: 388 NALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIE 447
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
P+GV F+ VL ACSHAGLV EG++ F M+ E RI PQ EHY CMVDL RA L++A +
Sbjct: 448 PNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAME 507
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
+++ MP PN +WG+L+++C+ H ++ E A+++ L + G+ ++LSNIYA R
Sbjct: 508 LIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKR 567
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
W+D VR K KG+ K S IEV ++H+F + + + L+ + Q++
Sbjct: 568 WDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQLKL 627
Query: 691 KGCVPDNDIIL 701
G P IL
Sbjct: 628 VGYTPSTSGIL 638
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 193/657 (29%), Positives = 344/657 (52%), Gaps = 50/657 (7%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
+L+ QC ++ QLK VH Q+I+ G +++S + L A +F+ P +
Sbjct: 41 YLIDQCISLKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIP---QP 97
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ ++N +++ ++ +L LY +M G+L + FT P V++AC + + + G
Sbjct: 98 NKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKAC----AAKSCYWLG 153
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
VH ++G + + N ++ +Y G ++ + ++FD +
Sbjct: 154 VCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDIS----------------- 196
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
E V+W S+++ +++ GR EE + +F M++ G+E +
Sbjct: 197 ------------------ERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTL 238
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
+LSV +G+ +H ++ G E V NAL+ +Y K G++K A+++F ++ +
Sbjct: 239 VGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLD 298
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
K++VSW +I +YA GL D A+E F+Q M NV+SW+++I G E
Sbjct: 299 KDVVSWTCMINAYANHGLIDCALEFFNQ--------MPGKNVVSWNSIIWCHVQEGLYAE 350
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
A+DLF +M + V+AN T+ +LS C+ L +G++ H ++ ++ + + N +++
Sbjct: 351 AVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIID 410
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY KCG L+ VF + +K+ ++WN +I ++G G+ A+ FE+M +G PD +
Sbjct: 411 MYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEIT 470
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
F +LSACSH+GLV+ G+ F++M F I P +EHYACMVDLLGR GLL EA ++K M
Sbjct: 471 FTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKM 530
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
P++P+ VW LL +CR + N + + + Q+ L +G Y+LLSN+Y+ S RW+D
Sbjct: 531 PVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMK 590
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
+ G+KK S+IE+ + F + ++ +L +L +++ G
Sbjct: 591 NIWKILDQNGIKKCRAISFIEIDGCCYQFMVDDKRHGASTSIYSMLGQLMDHLKSAG 647
>gi|125539877|gb|EAY86272.1| hypothetical protein OsI_07642 [Oryza sativa Indica Group]
Length = 596
Score = 344 bits (882), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 194/546 (35%), Positives = 311/546 (56%), Gaps = 28/546 (5%)
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G VH +++ + + N L+ +YA + + S FD + KN S+N + + A
Sbjct: 47 LGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLPHKNAHSYNSLLAALA 106
Query: 214 LNFDCDGALELFKRMELEGLEP---NFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGI- 268
G L R+ L+G+ P N V++ +++SS AR GR E + +F + R RG+
Sbjct: 107 RG---RGTLPDALRL-LDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLARDRGLG 162
Query: 269 --EVGAEAIAVV--LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
+V + VV S CA L + +HG V+ G E V + NA++ Y K G V+
Sbjct: 163 QQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVE 222
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A+ LF ++ ++ VSW ++I Y A + D+AV+VF + D I+W+A+I
Sbjct: 223 DARGLFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDA--------IAWTALI 274
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
NG E AL+LF +M VV + L CA+ + G+E+HG ++R S+
Sbjct: 275 SGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIG 334
Query: 445 K---NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
N+ + N L++MY KCG + VF+++ ++D+I+WNSM++G+ NG G+ +LA F
Sbjct: 335 SDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQSLAVF 394
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
E M++ +P V F+AVL+ACSHAGLV++GRRI + M ++ +EP+ EHYA +D LGR
Sbjct: 395 ERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESM-QDHGVEPRAEHYAAFIDALGR 453
Query: 562 AGLLQEASDIVKNMPME---PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
L+EAS+ +K + + WG LL +C +H N ++AE +A +F L E +G Y
Sbjct: 454 NHQLEEASEFIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALFQLEPENSGRY 513
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
++LSNIY+A+G+W+DA +VR K KGL+K SWIEV+R HMF + ++ + +
Sbjct: 514 VMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMFVADDTSHHEANEIY 573
Query: 679 EVLEEL 684
E+L++L
Sbjct: 574 EMLDKL 579
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 173/370 (46%), Gaps = 43/370 (11%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD------------C 93
L+++H ++V+G + +A ++ Y++ GR+ DAR +F+ C
Sbjct: 188 HLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGLFDQMTIRDSVSWTSMIAGYC 247
Query: 94 KSS----------------SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPL 137
++S ++ W +++ + NG E AL+L+ +M GV+ F
Sbjct: 248 RASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVS 307
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG---NVHIVNELIGMYAKMGQMSDSFKLF 194
+ AC +G + G+ VH +L+ NV I N LI MY+K G M + +F
Sbjct: 308 CLGACAKVG----LVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVF 363
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
D++ ++ ISWN M +GF+ N +L +F+RM + ++P +VT+ ++L++ + G +
Sbjct: 364 DRMLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVS 423
Query: 255 ETMDLFDMMRKRGIEVGAEAIAVVLSVCA-DLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
+ + + M+ G+E AE A + + + + I G K G AL
Sbjct: 424 DGRRILESMQDHGVEPRAEHYAAFIDALGRNHQLEEASEFIKGLSSKIGL-GTTGSWGAL 482
Query: 314 ICVYGKHGDVKVAQNLFS---EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
+ HG++++A+ + ++E +N + L Y+ AG D+A +V + ++ G
Sbjct: 483 LGACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMK---GK 539
Query: 371 SMERPNVISW 380
+ + SW
Sbjct: 540 GLRKDQAYSW 549
>gi|357112521|ref|XP_003558057.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 656
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 218/666 (32%), Positives = 327/666 (49%), Gaps = 65/666 (9%)
Query: 29 SLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDA------ 82
SLLD HL + C H L Q+H Q I +G A AF A+R+L ++ RL
Sbjct: 5 SLLDA--HLARCCSARHLL-QIHAQFIASGLLADAFAASRLL-LFTSASRLLPLPFHHSL 60
Query: 83 ---RNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVI 139
R V F C N++L+ + G+ L LY L D +T P++
Sbjct: 61 RLLRLVRYPNAFSC-------NTLLKSALIGGMPHLCLPLYAS---LPAPPDSYTHPILA 110
Query: 140 RACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV 199
AC + R G+ VH H + GF N+++ N LI MY+ G + D+ ++FD V
Sbjct: 111 AAC----ASRKDVIEGRQVHAHAVSHGFGDNLYLRNALIFMYSACGCLWDARRVFDAGPV 166
Query: 200 KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP------------------------ 235
+ +SWN + + + D D A+E+F +M
Sbjct: 167 WDAVSWNTILAAYVHAGDVDQAVEVFAQMPKRNATAVSSMVSLFGRRGMVDEARRVFDAA 226
Query: 236 ---NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
+ TWT+++S R E + +F MR+ V + V+S CA G+
Sbjct: 227 ECRDIFTWTAMISCFERNDMFAEALHVFSCMRRERWHVDEPLMVSVVSACAQSEVIQNGQ 286
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+ HG VI+ G V V+NALI +Y DV A+ LF E + SWN++I Y + G
Sbjct: 287 MCHGLVIRAGLCSQVNVQNALIHMYSSCLDVFAARRLFDSGECLDQYSWNSMIAGYLKNG 346
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+A+ +FS + D +SWS VI N + +AL +F MQ + +
Sbjct: 347 HVKDAMALFSAMPNKDN--------VSWSTVISGCVQNNQSSDALTVFDNMQAQGIRPDE 398
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
VTI ++S C +AL G+ +H ++ + ++++ L+NMYMKCGCLE F
Sbjct: 399 VTIVSVISACTNLSALEKGKSVHEYIKQNQYYVSLVLGTSLINMYMKCGCLEAALEAFNI 458
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG--FKPDGVAFVAVLSACSHAGLVN 530
+E+K WN++I G MNGL +L F EM EA P+ + F VLSAC HAGLV+
Sbjct: 459 MEEKGTPCWNAVIVGLAMNGLVMKSLDMFSEM-EASDTATPNEITFTGVLSACRHAGLVD 517
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
EGR F +M ++I P + HY CMVDLLGRAG ++EA D++++MPM P+ WG LL +
Sbjct: 518 EGRHFFKLMQHRYQIVPNIRHYGCMVDLLGRAGYVKEAEDMIQSMPMSPDVPAWGALLGA 577
Query: 591 CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVA 650
C H +V E + ++ G +LSNIYA G W+ +R S K + ++KV+
Sbjct: 578 CWKHGEYEVGERVGRKLVNRDPLHDGFQTMLSNIYAKEGMWQSVDDLRGSMKQRHVQKVS 637
Query: 651 GQSWIE 656
G S ++
Sbjct: 638 GHSVVK 643
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 165/474 (34%), Positives = 274/474 (57%), Gaps = 12/474 (2%)
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
D A +F +++ PN + +++ H+ ++ + +++G+ +
Sbjct: 70 DYASRIFSQIQ----NPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFL 125
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
+ C L MG HG +IK GFE V+V+N+L+ +Y GD + A +F + ++
Sbjct: 126 VKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDV 185
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
VSW ++I + + G + A ++F Q M N+++WS +I +A N ++A++
Sbjct: 186 VSWTSMIRGFNKCGDVESARKLFDQ--------MPEKNLVTWSTMISGYAQNNHFDKAVE 237
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
LF+ +Q V AN + ++S CA AL +G H +VV+ M N+++ L++MY
Sbjct: 238 LFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYA 297
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
+CG +++ VFE + ++D ++W ++I+G M+G E +L F M+EAG P + F A
Sbjct: 298 RCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTA 357
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
VLSACSH GLV G +IF+ M R+ R+EP++EHY CMVDLLGRAG L+EA V MP++
Sbjct: 358 VLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVK 417
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
PNA VWG LL +CR+HKN ++ E + + L+ + +G Y+LLSNIYA + WE ++R
Sbjct: 418 PNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMR 477
Query: 639 ISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
K KGLKK G S IE+ ++H F+ G+S ++ + + EE+ +++ G
Sbjct: 478 QMMKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAG 531
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 189/371 (50%), Gaps = 19/371 (5%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSI---YARFGRLFD-ARNVFETAPFDC 93
L+ C + LK +H +I T F A+R+++ + L D A +F
Sbjct: 24 LETCSDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQ--- 80
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ ++N+++R + + + A YV+ ++ G+L D TFP ++++C + S
Sbjct: 81 NPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCI----S 136
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G H H+++ GF+ +V++ N L+ MYA G + +F ++ + +SW M GF
Sbjct: 137 MGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFN 196
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
D + A +LF +M E N VTW++++S +A+ ++ ++LF +++ +G+
Sbjct: 197 KCGDVESARKLFDQMP----EKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANET 252
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ V+S CA L A +G+ H +V+K G + + AL+ +Y + G + A +F ++
Sbjct: 253 VMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDL 312
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
E++ +SW ALI A G + +++ F+ + ++ G P I+++AV+ A + G
Sbjct: 313 PERDTLSWTALIAGLAMHGYSERSLKYFATM--VEAGLT--PRDITFTAVLSACSHGGLV 368
Query: 394 EEALDLFRKMQ 404
E +F M+
Sbjct: 369 ERGFQIFESMK 379
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 123/266 (46%), Gaps = 41/266 (15%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFG----------RLF 80
F L++ C +H + Q H +I G ++ ++ +YA FG R++
Sbjct: 122 FPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMY 181
Query: 81 ---------------------DARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKL 119
AR +F+ P + + + W++++ N ++ A++L
Sbjct: 182 YVDVVSWTSMIRGFNKCGDVESARKLFDQMP---EKNLVTWSTMISGYAQNNHFDKAVEL 238
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
+ ++ GV + VI +C +G+ G+ H++V++ G N+ + L+
Sbjct: 239 FKVLQSQGVRANETVMVSVISSCAHLGAL----ELGERAHDYVVKNGMTLNLILGTALVD 294
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MYA+ G + + +F+ + ++ +SW + +G A++ + +L+ F M GL P +T
Sbjct: 295 MYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDIT 354
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRK 265
+T++LS+ + G +E +F+ M++
Sbjct: 355 FTAVLSACSHGGLVERGFQIFESMKR 380
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 206/671 (30%), Positives = 343/671 (51%), Gaps = 53/671 (7%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F LL C I QVH ++ G F+A ++ YA G++ R VF+
Sbjct: 125 FPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEM- 183
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + W S++ + + A+ L+ +M ++GV + T I AC +
Sbjct: 184 --LERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLEL 241
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ V N + ++G + N +VN L+ MY K G M ++FD+ KN + +N
Sbjct: 242 ----GKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYN---- 293
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
+++S++ + G E + + D M ++G
Sbjct: 294 -------------------------------TIMSNYVQHGLAGEVLVVLDEMLQKGQRP 322
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+ ++ CA L +GK H +V + G E + NA+I +Y K G + A +F
Sbjct: 323 DKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVF 382
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+ K +V+WN+LI G + A+ +F G M N++SW+ +IGA
Sbjct: 383 DSMSNKTVVTWNSLIAGLVRDGELELALRIF--------GEMPESNLVSWNTMIGAMVQA 434
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
EEA+DL R+MQ + + VT+ G+ S C AL++ + I+ ++ + ++ ++ +
Sbjct: 435 SMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLG 494
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
L++M+ +CG VFE +EK+D+ W + I + G + A+ F+EM++ K
Sbjct: 495 TALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVK 554
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
D FVA+L+A SH G V++GR++F M + + PQ+ HY CMVDLLGRAGLL+EA D
Sbjct: 555 ADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFD 614
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
++K+MP++PN +WG+ L +CR HKN + A +I L E G ++LLSNIYA++G+
Sbjct: 615 LMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGK 674
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
W D A+VR+ K KG +KVAG S IEV I F+SG+ ++ + +L+E+ ++
Sbjct: 675 WNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRISQ 734
Query: 691 KGCVPDNDIIL 701
G VPD +L
Sbjct: 735 VGYVPDTTNVL 745
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 152/314 (48%), Gaps = 42/314 (13%)
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVL 279
AL FK E EG + + T +L+ +A G +E + ++ M+ GI +L
Sbjct: 72 ALNAFK--EDEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLL 129
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
S C+ + A G +HG V+K G +FV N+LI
Sbjct: 130 SACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLI------------------------- 164
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
YA G D +VF ++ +ER NV+SW+++I ++ +EA+ L
Sbjct: 165 ------HFYAACGKVDLGRKVFDEM-------LER-NVVSWTSLINGYSVVNMAKEAVCL 210
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
F +M V N VT+ +S CA+ L +G+++ + + + N LV N LL+MYMK
Sbjct: 211 FFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMK 270
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
CG + +F++ K+L+ +N+++S Y +GL L +EM++ G +PD V ++
Sbjct: 271 CGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLST 330
Query: 520 LSACSHAGLVNEGR 533
++AC+ G ++ G+
Sbjct: 331 IAACAQLGDLSVGK 344
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/548 (33%), Positives = 303/548 (55%), Gaps = 44/548 (8%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G VH H GF V I N ++ MY K + ++ +LFD++ ++ SWN+M SG+A
Sbjct: 108 GMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAK 167
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAE 273
A +LF +M E + +WT++ S + R + EE ++LF M R +
Sbjct: 168 AGRLQEARKLFDQM----TERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKF 223
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
++ L+ A + + H+GK IHG +++ G +
Sbjct: 224 TMSSALAASAAIQSLHLGKEIHGHILRIGLD----------------------------- 254
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
+ V W+AL Y + G EA +F + +++R +V+SW+A+I + GR
Sbjct: 255 --LDGVVWSALSDMYGKCGSIGEARHIFDK-------TVDR-DVVSWTAMIDRYFKEGRR 304
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
EE LF + + + N T SG+L+ CA+ AA +G+++HG++ R+ + + + L
Sbjct: 305 EEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTL 364
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY KCG ++ VF + + DL++W S+ISGY NG + AL FE ++++G +PD
Sbjct: 365 VHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDH 424
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
+ FV VLSAC+HAGLV++G FD + + + +HYAC++DLL R+G LQEA DI+
Sbjct: 425 ITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIID 484
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
MP+EP+ ++W +LL CR+H N +A+ A +F + E +Y L+NIYA +G W
Sbjct: 485 KMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGG 544
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
A+VR +G+ K G SWIE+KR++H+F G++ + K + E L +L+ +M+ +G
Sbjct: 545 VAEVRKVMDARGVVKKPGLSWIEIKREVHVFLVGDTSHAKSKEIHEFLGKLSKRMKEEGY 604
Query: 694 VPDNDIIL 701
VPD + +L
Sbjct: 605 VPDTNFVL 612
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 180/350 (51%), Gaps = 15/350 (4%)
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
RL E + + D + + A + +L +C L A G +H GF V + N
Sbjct: 73 RLREAIQILDHVDR----PSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISN 128
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
++ +Y K + A+ LF E+ E+++ SWN +I+ YA+AG EA ++F Q+
Sbjct: 129 RILDMYIKCNSLVNAKRLFDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQM------- 181
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK-VVANSVTISGLLSVCAESAALNI 430
ER N SW+A+ + + + EEAL+LFR MQ + N T+S L+ A +L++
Sbjct: 182 TERDN-FSWTAMTSGYVRHDQHEEALELFRAMQRHENFKCNKFTMSSALAASAAIQSLHL 240
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
G+EIHGH++R+ ++ + +V + L +MY KCG + E +F++ +D+++W +MI Y
Sbjct: 241 GKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVSWTAMIDRYFK 300
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
G E A F +++++G P+ F VL+AC+ G+++ M R +P
Sbjct: 301 EGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTR-IGFDPSSF 359
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
+ +V + + G ++ A + MP P+ W +L++ + D A
Sbjct: 360 AASTLVHMYTKCGNIKNARRVFNGMP-RPDLVSWTSLISGYAQNGQPDEA 408
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 202/436 (46%), Gaps = 66/436 (15%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM-RKLG 127
++S YA+ GRL +AR +F+ + + W ++ V + +E AL+L+ M R
Sbjct: 161 MISGYAKAGRLQEARKLFDQM---TERDNFSWTAMTSGYVRHDQHEEALELFRAMQRHEN 217
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
+ FT + A + S G+ +H H+L++G + + + L MY K G +
Sbjct: 218 FKCNKFTMSSALAASAAIQSLH----LGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSI 273
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
++ +FDK ++ +SW T+++ +
Sbjct: 274 GEARHIFDKTVDRDVVSW-----------------------------------TAMIDRY 298
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
+ GR EE LF + K GI + VL+ CAD AA+ +GK +HG++ + GF+
Sbjct: 299 FKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSS 358
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
F + L+ +Y K G++K A+ +F+ + ++VSW +LI+ YA+ G DEA++ F L K
Sbjct: 359 FAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDEALQFFELLLK- 417
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT-ISGLLSVCAESA 426
S +P+ I++ V+ A G ++ L+ F ++ + ++ + L+ + + S
Sbjct: 418 ---SGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSG 474
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL---------VFEQIEKKD 477
L +I + ++ + + + LL GC G+L +FE IE ++
Sbjct: 475 RLQEAEDI---IDKMPIEPDKFLWASLLG-----GCRIHGNLKLAKRAAEALFE-IEPEN 525
Query: 478 LITWNSMISGYGMNGL 493
T+ ++ + Y GL
Sbjct: 526 PATYTTLANIYATAGL 541
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 170/345 (49%), Gaps = 21/345 (6%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE-TAPFDCKSSSLLW 100
+++H K++H ++ G + + + + +Y + G + +AR++F+ T D S W
Sbjct: 236 QSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIFDKTVDRDVVS----W 291
Query: 101 NSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
+++ G E L+ + K G+ + FTF V+ AC + G+ VH
Sbjct: 292 TAMIDRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAE----ELGKQVHG 347
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
++ ++GF + + L+ MY K G + ++ ++F+ + + +SW + SG+A N D
Sbjct: 348 YMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNGQPDE 407
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGIEVGAEAIAVVL 279
AL+ F+ + G +P+ +T+ +LS+ G +++ ++ FD ++ K G+ A+ A ++
Sbjct: 408 ALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLI 467
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN----LFSEIEE 335
+ L+ + + K E F+ +L+ HG++K+A+ LF EIE
Sbjct: 468 DL---LSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALF-EIEP 523
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
+N ++ L YA AGL EV ++ G +++P +SW
Sbjct: 524 ENPATYTTLANIYATAGLWGGVAEVRKVMDAR--GVVKKPG-LSW 565
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 186/550 (33%), Positives = 307/550 (55%), Gaps = 20/550 (3%)
Query: 153 SFGQIVHNHVLQMGFQGNVHIV-NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
+ + V +H Q F N I N+LI Y + G + + ++F+ ++VK+ ++WN + +
Sbjct: 22 TLSKYVSSHTHQHEFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAA 81
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
FA G E +++ + +PN V++ +L+ H + + FD M + +
Sbjct: 82 FAKK---PGHFEYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASW 138
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
I+ + V MG+ F E +A++ Y GD+ A F
Sbjct: 139 NTMISALAQVGL------MGEARRLF--SAMPEKNCVSWSAMVSGYVACGDLDAAVECFY 190
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+++++W A+IT Y + G + A +F + M +++W+A+I + NG
Sbjct: 191 AAPMRSVITWTAMITGYMKFGRVELAERLFQE--------MSMRTLVTWNAMIAGYVENG 242
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
R E+ L LFR M V N+++++ +L C+ +AL +G+++H V + ++ +
Sbjct: 243 RAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGT 302
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++MY KCG L++ +F QI +KD++ WN+MISGY +G G+ AL F+EM + G KP
Sbjct: 303 SLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKP 362
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D + FVAVL AC+HAGLV+ G + F+ M R+F IE + EHYACMVDLLGRAG L EA D+
Sbjct: 363 DWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDL 422
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
+K+MP +P+ ++GTLL +CR+HKN ++AE A + L Y+ L+N+YAA RW
Sbjct: 423 IKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRW 482
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
+ A +R S K + K+ G SWIE+ +H F S + L +L ++ E L++L +M+
Sbjct: 483 DHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLA 542
Query: 692 GCVPDNDIIL 701
G VPD + +L
Sbjct: 543 GYVPDLEFVL 552
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 176/376 (46%), Gaps = 53/376 (14%)
Query: 60 NASAFLAARVLSIYARFGRLFDARNVFETAPFDCK-SSSLLWNSILRVNVSN-GLYENAL 117
N + + ++++ Y R G + A VFE D K S++ WNSIL G +E A
Sbjct: 38 NNNVIASNKLIASYVRCGDIDSAVRVFE----DMKVKSTVTWNSILAAFAKKPGHFEYAR 93
Query: 118 KLYVKMRKLGVLGDGFTFPLVIRACKF--MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVN 175
+L+ K+ + + ++ AC + +G R F + V N
Sbjct: 94 QLFEKIPQPNTVSYN-----IMLACHWHHLGVHDARGFFDSMPLKDVASW---------N 139
Query: 176 ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK--------- 226
+I A++G M ++ +LF + KN +SW+ M SG+ D D A+E F
Sbjct: 140 TMISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVIT 199
Query: 227 ------------RMEL------EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
R+EL E VTW ++++ + GR E+ + LF M + G+
Sbjct: 200 WTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGV 259
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
+ A ++ VL C++L+A +GK +H V K +L+ +Y K GD+K A
Sbjct: 260 KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWE 319
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
LF +I K++V WNA+I+ YA+ G +A+ +F +++K +G +P+ I++ AV+ A
Sbjct: 320 LFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKK-EG---LKPDWITFVAVLLACN 375
Query: 389 SNGRGEEALDLFRKMQ 404
G + + F M+
Sbjct: 376 HAGLVDLGVQYFNTMR 391
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 169/358 (47%), Gaps = 36/358 (10%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y +FGR+ A +F+ + + WN+++ V NG E+ L+L+ M + GV +
Sbjct: 207 YMKFGRVELAERLFQEMSM---RTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNA 263
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
+ V+ C + + + G+ VH V + + L+ MY+K G + D+++
Sbjct: 264 LSLTSVLLGCSNLSALQL----GKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWE 319
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
LF ++ K+ + WN M SG+A + AL LF M+ EGL+P+++T+ ++L + G
Sbjct: 320 LFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGL 379
Query: 253 LEETMDLFDMMRKR-GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
++ + F+ MR+ GIE E A ++ + A + + + + F+ + +
Sbjct: 380 VDLGVQYFNTMRRDFGIETKPEHYACMVDLLG--RAGKLSEAV-DLIKSMPFKPHPAIYG 436
Query: 312 ALICVYGKHGDVKVAQNL-FSEIEEKNIVSWNALI-TSYAEAGLCDEAVEVFSQLEKLDG 369
L+ G ++ +NL +E KN++ + I T Y + A + + +
Sbjct: 437 TLL------GACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIR- 489
Query: 370 GSMERPNVI-----SW---SAVIGAFASNGR--------GEEALDLFRKMQLAKVVAN 411
SM+ NV+ SW ++V+ F S+ R E+ DL +KM+LA V +
Sbjct: 490 RSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMKLAGYVPD 547
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQVH + ++ ++S+Y++ G L DA +F P + + WN+++
Sbjct: 283 KQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIP---RKDVVCWNAMISGY 339
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+G + AL+L+ +M+K G+ D TF V+ AC G
Sbjct: 340 AQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAG 378
>gi|218190567|gb|EEC72994.1| hypothetical protein OsI_06907 [Oryza sativa Indica Group]
Length = 711
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 216/719 (30%), Positives = 343/719 (47%), Gaps = 120/719 (16%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
Q Q+H L+ G +++ F+ + ++++Y+R +L + VF+T P +++ W +++
Sbjct: 31 QGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMP---TKNTVSWTAMIS 87
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
+ E L L+ M + TF + C + + G+ VH ++M
Sbjct: 88 GFALHNRVEPCLHLFASMMLSSCKPNDITFATLFSVC----TKHALLALGRSVHALQMRM 143
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
GF VH+ N L+ MYAK G + ++ +F + K+ +SWN + G + L+L
Sbjct: 144 GFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFGCSQYVLAKHCLDLL 203
Query: 226 KRMELEGLEPNFVTWTSLLSS--HAR---------------------------------C 250
K ME + + P+ +++ +LSS HAR
Sbjct: 204 KEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMIEHGIKPGLDHYSCMVDLLGRA 263
Query: 251 GRLEETMDLFDMM----------------RKRG-IEVGAEA------------------- 274
G LEE DL M R G I +G +A
Sbjct: 264 GLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLEPGKGETSTDQS 323
Query: 275 -IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+A +S CAD G +HG ++K G + VF+ ++LI +Y + ++ + +F
Sbjct: 324 ILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQ-- 381
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
+M N +SW+A+I FA + R
Sbjct: 382 -------------------------------------TMPTKNTVSWTAMISGFALHNRV 404
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
E L LF M+L+ N +T + L SVC A L +G+ +H +R+ + + V N L
Sbjct: 405 EPCLHLFASMRLSSCKPNDITFATLFSVCTNHALLALGKSVHALQMRMGFHSYVHVSNAL 464
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
L+MY KCGC++E +F I KDL++WN+MI G GL ++ L +EM PD
Sbjct: 465 LSMYAKCGCIDEAQSIFGFIACKDLVSWNAMIFGCSQYGLAKHCLDLLKEMERQHIVPDA 524
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
++F+ VLS+C HA LV EGR F M+ E I+P ++HY+CMVDLLGRAGLL+EA D+++
Sbjct: 525 LSFLGVLSSCRHARLVEEGRHCFKTMI-EHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQ 583
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
M + PNA +WG+LL SCR+H N + A L +++ L+N+YA G W D
Sbjct: 584 TMSIPPNAVIWGSLLGSCRVHGNISIGIQAAEHRLKLEPGCAATHIQLANLYATIGCWSD 643
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS-DLKNVCEVLEELALQMENK 691
A+VR++ K +GLK G SWIEV K++ F++ N +S + NV +L+ L ME K
Sbjct: 644 VARVRMAMKARGLKTNIGCSWIEVGDKVYSFTAENRSKSHQVNNVLAILDCLQAHMECK 702
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 179/339 (52%), Gaps = 40/339 (11%)
Query: 261 DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
++ RK +A +S CAD G +HG ++K G + VF+ ++LI +Y +
Sbjct: 2 ELHRKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRC 61
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
++ + +F + KN VSW A+I+
Sbjct: 62 SQLESSYLVFQTMPTKNTVSWTAMIS---------------------------------- 87
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
FA + R E L LF M L+ N +T + L SVC + A L +GR +H +R
Sbjct: 88 -----GFALHNRVEPCLHLFASMMLSSCKPNDITFATLFSVCTKHALLALGRSVHALQMR 142
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
+ + + V N LL+MY KCGC+EE +F I KDL++WN++I G L ++ L
Sbjct: 143 MGFHSYVHVSNALLSMYAKCGCIEEAQFIFGCIACKDLVSWNAIIFGCSQYVLAKHCLDL 202
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
+EM PD ++F+ VLS+C HA LV EGR F M+ E I+P ++HY+CMVDLLG
Sbjct: 203 LKEMERQHIVPDALSFLGVLSSCRHARLVEEGRHCFKTMI-EHGIKPGLDHYSCMVDLLG 261
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
RAGLL+EA D+++ M + PNA +WG+LL SCR+H N +
Sbjct: 262 RAGLLEEAWDLIQTMSIPPNAVIWGSLLGSCRVHGNISI 300
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 203/491 (41%), Gaps = 104/491 (21%)
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
R F+ G +H ++++G V I + LI +Y++ Q+ S+ +F + KN +SW M
Sbjct: 26 RQMFTQGTQLHGLLVKVGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMPTKNTVSWTAM 85
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
SGFAL+ + L LF M L +PN +T+
Sbjct: 86 ISGFALHNRVEPCLHLFASMMLSSCKPNDITF---------------------------- 117
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
A + SVC A +G+ +H ++ GF YV V NAL+ +Y K G ++ AQ
Sbjct: 118 -------ATLFSVCTKHALLALGRSVHALQMRMGFHSYVHVSNALLSMYAKCGCIEEAQF 170
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK-------------LDGGSMER- 374
+F I K++VSWNA+I ++ L +++ ++E+ L R
Sbjct: 171 IFGCIACKDLVSWNAIIFGCSQYVLAKHCLDLLKEMERQHIVPDALSFLGVLSSCRHARL 230
Query: 375 -----------------PNVISWSAVIGAFASNGRGEEALDLFRKMQL------------ 405
P + +S ++ G EEA DL + M +
Sbjct: 231 VEEGRHCFKTMIEHGIKPGLDHYSCMVDLLGRAGLLEEAWDLIQTMSIPPNAVIWGSLLG 290
Query: 406 -------------------------AKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+ + ++ +S CA+ G ++HG +V+
Sbjct: 291 SCRVHGNISIGIQAAEHRLKLEPGKGETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVK 350
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
V + + + + L+ +Y +C LE +LVF+ + K+ ++W +MISG+ ++ E L
Sbjct: 351 VGCDSTVFIGSSLITLYSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHL 410
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F M + KP+ + F + S C++ L+ G+ + + +R + ++ +
Sbjct: 411 FASMRLSSCKPNDITFATLFSVCTNHALLALGKSVHALQMR-MGFHSYVHVSNALLSMYA 469
Query: 561 RAGLLQEASDI 571
+ G + EA I
Sbjct: 470 KCGCIDEAQSI 480
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 77/145 (53%), Gaps = 3/145 (2%)
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
++L RK + + ++ +S CA+ G ++HG +V+V + + + + L+ +
Sbjct: 1 MELHRK---GETSTDQSILAAAMSSCADRQMFTQGTQLHGLLVKVGCDSTVFIGSSLITL 57
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y +C LE +LVF+ + K+ ++W +MISG+ ++ E L F M+ + KP+ + F
Sbjct: 58 YSRCSQLESSYLVFQTMPTKNTVSWTAMISGFALHNRVEPCLHLFASMMLSSCKPNDITF 117
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVR 541
+ S C+ L+ GR + + +R
Sbjct: 118 ATLFSVCTKHALLALGRSVHALQMR 142
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 343 bits (880), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 204/690 (29%), Positives = 343/690 (49%), Gaps = 85/690 (12%)
Query: 19 RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGA-NASAFLAARVLSIYARFG 77
+P S T+++ L K++ Q Q+H + G + +LA ++ + YA G
Sbjct: 13 KPSSTSTFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCG 72
Query: 78 RLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPL 137
+ A+++F+ +S LWNS++R N AL LY+KM G D FT+P
Sbjct: 73 HMPYAQHIFDQIVL---KNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPF 129
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
V++AC G R G+ VH V+ G + +V++ N ++ MY K G + + +FD++
Sbjct: 130 VLKAC---GDLLLR-EMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRM 185
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
V++ S W +++S + G
Sbjct: 186 LVRDLTS-----------------------------------WNTMMSGFVKNGEARGAF 210
Query: 258 DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV---FVKNALI 314
++F MR+ G + +LS C D+ +GK IHG+V++ G V F+ N++I
Sbjct: 211 EVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSII 270
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
+Y V A+ LF + K++VS
Sbjct: 271 DMYCNCESVSCARKLFEGLRVKDVVS---------------------------------- 296
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
W+++I + G +AL+LF +M + V + VT+ +L+ C + +AL +G +
Sbjct: 297 -----WNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATV 351
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
+VV+ N++V L+ MY CG L VF+++ +K+L M++G+G++G G
Sbjct: 352 QSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRG 411
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
A++ F EM+ G PD F AVLSACSH+GLV+EG+ IF M R++ +EP+ HY+C
Sbjct: 412 REAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSC 471
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
+VDLLGRAG L EA +++NM ++PN VW LL++CR+H+N +A A ++F L +
Sbjct: 472 LVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDG 531
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
Y+ LSNIYAA RWED VR + L+K S++E+ + +H F G++
Sbjct: 532 VSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQS 591
Query: 675 KNVCEVLEELALQMENKGCVPDNDIILWEM 704
++ L++L Q++ G PD ++L+++
Sbjct: 592 DDIYAKLKDLNEQLKKAGYKPDTSLVLYDV 621
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 224/751 (29%), Positives = 373/751 (49%), Gaps = 85/751 (11%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFDCKSSSLLWNSILRV 106
+QVH Q + G + ++ +Y + G + D R VF E D S WNS+L
Sbjct: 122 EQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVS----WNSLLTG 177
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
N + +L+ M+ G D +T VI A G+ + G +H V+++G
Sbjct: 178 YSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAV----AIGMQIHALVVKLG 233
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F+ + N LI M +K G + D+ +FD + K+ +SWN M +G +N A E F
Sbjct: 234 FETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFN 293
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE-------AIAVVL 279
M+L G +P T+ S++ S C L+E + L ++ + ++ G A+ V L
Sbjct: 294 NMQLAGAKPTHATFASVIKS---CASLKE-LGLVRVLHCKTLKSGLSTNQNVLTALMVAL 349
Query: 280 SVCADLA-ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS------- 331
+ C ++ A + ++HG V A+I Y ++GD A NLFS
Sbjct: 350 TKCKEIDDAFSLFSLMHGV-------QSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGV 402
Query: 332 --------------------EIE--------EKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
EI EK+ AL+ ++ + G +AV+VF
Sbjct: 403 KPNHFTYSTILTVQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFEL 462
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC- 422
+E D VI+WSA++ +A G EEA +F ++ + N T +++ C
Sbjct: 463 IETKD--------VIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACT 514
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A +A++ G++ H + +++ +N + V + L+ +Y K G +E H +F++ +++DL++WN
Sbjct: 515 APTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWN 574
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
SMISGY +G + AL FEEM + + D + F+ V+SAC+HAGLV +G+ F++M+ +
Sbjct: 575 SMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMIND 634
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
I P MEHY+CM+DL RAG+L +A DI+ MP P A VW +L + R+H+N ++ +
Sbjct: 635 HHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKL 694
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
A +I L + + +Y+LLSNIYAA+G W + VR + +KK G SWIEVK K +
Sbjct: 695 AAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTY 754
Query: 663 MFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIK 722
F +G+ ++ L EL ++ + G PD + + + I+ + + I
Sbjct: 755 SFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHD---------IEDEQKETIL 805
Query: 723 SKHRIVGFRNLKLGLRLLLSLRSTNGQLMKN 753
S H L + L+ +L Q++KN
Sbjct: 806 SHHS----ERLAIAFGLIATLPEIPLQIVKN 832
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 146/601 (24%), Positives = 257/601 (42%), Gaps = 112/601 (18%)
Query: 60 NASAFLAARVLSIYAR-FGRLFDAR---NVFETAPF-DCKSSSLLWNSILRVNVSNGLYE 114
+A+ L + V+++ AR R D R +F+ P D K + L R + + +
Sbjct: 29 HANPLLQSHVVALNARTLLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQT----Q 84
Query: 115 NALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIV 174
AL L+V + + G+ D +T V+ C GSF + G+ VH ++ G ++ +
Sbjct: 85 EALHLFVSLYRSGLSPDSYTMSCVLSVCA--GSFNG--TVGEQVHCQCVKCGLVHHLSVG 140
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N L+ MY K G + D ++FD++ ++ +SWN + +G++ N D ELF M++EG
Sbjct: 141 NSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYR 200
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
P++ T ++ V++ A+ A +G I
Sbjct: 201 PDYYT-----------------------------------VSTVIAALANQGAVAIGMQI 225
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
H V+K GFE V N+LI + K G ++ A+ +F +E K+ VSWN++I + G
Sbjct: 226 HALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQD 285
Query: 355 DEAVEVFSQLE---------------------------------KLDGGSMERPNVISWS 381
EA E F+ ++ L G NV+ +
Sbjct: 286 LEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVL--T 343
Query: 382 AVIGAFASNGRGEEALDLFRKMQ-LAKVVANSVTISGLLSVCAESAALNIG--------- 431
A++ A ++A LF M + VV+ + ISG L A+N+
Sbjct: 344 ALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVK 403
Query: 432 ------------------REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
EIH V++ + K+ V LL+ ++K G + + VFE I
Sbjct: 404 PNHFTYSTILTVQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELI 463
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
E KD+I W++M++GY G E A F ++ G KP+ F ++++AC+ E
Sbjct: 464 ETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQG 523
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRM 593
+ F + R+ + + +V L + G ++ A +I K E + W ++++
Sbjct: 524 KQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQK-ERDLVSWNSMISGYAQ 582
Query: 594 H 594
H
Sbjct: 583 H 583
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 111/217 (51%), Gaps = 6/217 (2%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
+ ++H ++I T S+ + +L + + G + DA VFE + W+++L
Sbjct: 421 ISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIE---TKDVIAWSAMLAG 477
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
G E A K++ ++ + G+ + FTF +I AC + G+ H + +++
Sbjct: 478 YAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTA---SVEQGKQFHAYAIKLR 534
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+ + + L+ +YAK G + + ++F + + ++ +SWN M SG+A + ALE+F+
Sbjct: 535 LNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFE 594
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
M+ LE + +T+ ++S+ A G + + + F++M
Sbjct: 595 EMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIM 631
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 116/252 (46%), Gaps = 16/252 (6%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL-WN 101
++ Q KQ H I N + +++ ++++YA+ G + A +F+ K L+ WN
Sbjct: 519 SVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQ----KERDLVSWN 574
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRFSFGQIVHN 160
S++ +G + AL+++ +M+K + D TF VI AC G + + F ++++
Sbjct: 575 SMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMIND 634
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMMFSGFALNFDCD 219
H + + + +I +Y++ G + + + + + + W ++ + ++ + +
Sbjct: 635 HHINPTMEH----YSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIE 690
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGI--EVGAEAIA 276
L ++ LEP LLS+ +A G E +++ +M KR + E G I
Sbjct: 691 --LGKLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIE 748
Query: 277 VVLSVCADLAAD 288
V + LA D
Sbjct: 749 VKNKTYSFLAGD 760
>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 802
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 191/564 (33%), Positives = 306/564 (54%), Gaps = 44/564 (7%)
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+ G+ VH H F + I N LI MYAK G + D+ LFD++ K+ SWN M S
Sbjct: 78 KLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMIS 137
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK-RGIE 269
G+A + A +LF M NF +W +++S + G E +DLF MM++
Sbjct: 138 GYANVGRIEQARKLFDEMPHRD---NF-SWNAVISGYVSQGWYMEALDLFRMMQENESSN 193
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
++ L+ A +++ GK IHG++I+ G E
Sbjct: 194 CNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLE------------------------- 228
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
++E V W AL+ Y + G +EA +F Q+ D ++SW+ +I
Sbjct: 229 ---LDE---VVWTALLDLYGKCGSLNEARGIFDQMADKD--------IVSWTTMIHRCFE 274
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
+GR +E LFR + + V N T +G+L+ CA+ AA +G+E+HG++ RV +
Sbjct: 275 DGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFA 334
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
+ L+++Y KCG E VF Q+ + DL++W S+I GY NG + AL FE ++ +G
Sbjct: 335 ASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGT 394
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
KPD + FV VLSAC+HAGLV+ G F + + + +HYAC++DLL R+G +EA
Sbjct: 395 KPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAE 454
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASG 629
+I+ NMPM+P+ ++W +LL CR+H N ++AE A +F L E +Y+ LSNIYA +G
Sbjct: 455 NIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAG 514
Query: 630 RWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
W + KVR +G+ K G+SWIE+KR++H+F G++ + ++ E L EL+ +M+
Sbjct: 515 LWTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMK 574
Query: 690 NKGCVPDNDIILWEMMGKKNVKRI 713
+G V D + +L ++ ++ + I
Sbjct: 575 EEGYVADTNFVLHDVEEEQKEQNI 598
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 179/369 (48%), Gaps = 20/369 (5%)
Query: 242 SLLSSHARCGRLEETMDLFDMMRK---------RGIEVGAEAIAVVLSVCADLAADHMGK 292
+ LS H+ R EE ++LF + R + + +++ C +GK
Sbjct: 24 TTLSHHSEHRRFEEIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGK 83
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+H F + + N LI +Y K G + AQ LF EI +K++ SWN +I+ YA G
Sbjct: 84 RVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVG 143
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV-AN 411
++A ++F ++ D SW+AVI + S G EALDLFR MQ + N
Sbjct: 144 RIEQARKLFDEMPHRDN--------FSWNAVISGYVSQGWYMEALDLFRMMQENESSNCN 195
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
T+S L+ A ++L G+EIHG+++R + + +V LL++Y KCG L E +F+
Sbjct: 196 MFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFD 255
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
Q+ KD+++W +MI +G + + F +++ +G +P+ F VL+AC+
Sbjct: 256 QMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQM 315
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
G+ + M R +P + +V + + G + A + MP P+ W +L+
Sbjct: 316 GKEVHGYMTR-VGYDPFSFAASALVHVYSKCGNTETARRVFNQMP-RPDLVSWTSLIVGY 373
Query: 592 RMHKNTDVA 600
+ D+A
Sbjct: 374 AQNGQPDMA 382
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 213/479 (44%), Gaps = 95/479 (19%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S YA GR+ AR +F+ P + WN+++ VS G Y AL L+ M++
Sbjct: 135 MISGYANVGRIEQARKLFDEMP---HRDNFSWNAVISGYVSQGWYMEALDLFRMMQENES 191
Query: 129 LG-DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
+ FT + A + S R G+ +H ++++ G + + + L+ +Y K G +
Sbjct: 192 SNCNMFTLSSALAAAAAISSLR----RGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSL 247
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
+++ +FD++ K+ +SW M + LF+ + G+ PN T+
Sbjct: 248 NEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTF------- 300
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
A VL+ CADLAA+ MGK +HG++ + G++ +
Sbjct: 301 ----------------------------AGVLNACADLAAEQMGKEVHGYMTRVGYDPFS 332
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
F +AL+ VY K G+ + A+ +F+++ ++VSW +LI YA+ G D A++ F L +
Sbjct: 333 FAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLR- 391
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
S +P+ +T G+LS C +
Sbjct: 392 ---SGTKPD-----------------------------------EITFVGVLSACTHAGL 413
Query: 428 LNIGREIHGHVVRVSMNKNILVQNG-----LLNMYMKCGCLEEGHLVFEQIE-KKDLITW 481
++IG E + H V+ K+ LV ++++ + G +E + + + K D W
Sbjct: 414 VDIGLE-YFHSVK---EKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLW 469
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVA-FVAVLSACSHAGLVNEGRRIFDMM 539
S++ G ++G E A + + E +P+ A ++ + + ++AGL E ++ + M
Sbjct: 470 ASLLGGCRIHGNIELAERAAKALFE--LEPENPATYITLSNIYANAGLWTEETKVRNDM 526
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 162/338 (47%), Gaps = 19/338 (5%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K++H LI +G + +L +Y + G L +AR +F+ + W +++
Sbjct: 216 KEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQM---ADKDIVSWTTMIHRC 272
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+G + L+ + GV + +TF V+ AC + + + G+ VH ++ ++G+
Sbjct: 273 FEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQM----GKEVHGYMTRVGY 328
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ L+ +Y+K G + ++F+++ + +SW + G+A N D AL+ F+
Sbjct: 329 DPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFES 388
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGIEVGAEAIAVVLSVCADLA 286
+ G +P+ +T+ +LS+ G ++ ++ F ++ K G+ A+ A V+ + LA
Sbjct: 389 LLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDL---LA 445
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN----LFSEIEEKNIVSWN 342
K + + F+ +L+ HG++++A+ LF E+E +N ++
Sbjct: 446 RSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALF-ELEPENPATYI 504
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
L YA AGL E +V + ++ + G +++P SW
Sbjct: 505 TLSNIYANAGLWTEETKVRNDMD--NRGIVKKPGK-SW 539
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 209/679 (30%), Positives = 357/679 (52%), Gaps = 95/679 (13%)
Query: 35 DHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA--RFGRLFDARNVF----ET 88
D L C +I + KQ H L+ T + +++++S A G L AR +F
Sbjct: 15 DFLKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNP 74
Query: 89 APFDCKSSSLLWNSILR-VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
PF C N+++R S YE A+ LY M + GV D +T+P V+ AC +G+
Sbjct: 75 DPFIC-------NTMIRGYARSQNPYE-AVSLYYFMVERGVPVDNYTYPFVLAACARLGA 126
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
+ G+ H VL+ GF ++ ++N LI Y G + +FD+ V++ ++WN+
Sbjct: 127 VKL----GRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNI 182
Query: 208 MFSGFALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
M + + A +L M +L+ L P+ VT SL+ + A+ G LE
Sbjct: 183 MINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLER----------- 231
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
GK +H + + G ++ + V NA++ +Y K D++ A
Sbjct: 232 ------------------------GKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESA 267
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
Q EVF+++ + D V+SW++++
Sbjct: 268 Q-------------------------------EVFNRIREKD--------VLSWTSMLSG 288
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
A +G +EAL LF+KMQL K+ + +T+ G+LS CA++ AL+ G+ IH + + +N +
Sbjct: 289 LAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCD 348
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
++++ L++MY KCG ++ VF ++ +++ TWN++I G M+G GE+A++ F++M
Sbjct: 349 LVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEH 408
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
PD V F+A+L ACSHAGLV+EG +F M +F+IEP+MEHY C+VDLL RA +
Sbjct: 409 DKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVD 468
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
+A ++NMP++ N+ +W TLL +CR + D+AE + ++ L ++ G Y++LSN+YA
Sbjct: 469 DALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYA 528
Query: 627 ASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELAL 686
+W+ A K+R K KG++K G SWIE+ IH F +G+ + + ++EE+
Sbjct: 529 GVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTR 588
Query: 687 QME-NKGCVPDNDIILWEM 704
++ + G VP +L+++
Sbjct: 589 RVNLDGGHVPGTANVLFDI 607
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 199/603 (33%), Positives = 323/603 (53%), Gaps = 49/603 (8%)
Query: 173 IVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG 232
I N+L+ +YAK G++SD+ +FD + ++ SWN + S +A + +F +M
Sbjct: 60 IHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYR- 118
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
+ V++ +L++ A G + + + M++ G + + L C+ L GK
Sbjct: 119 ---DSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGK 175
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
IHG ++ + FV+NA+ +Y K GD+ A+ LF + +KN+VSWN +I+ Y + G
Sbjct: 176 QIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMG 235
Query: 353 LCDEAVEVFSQLE----------------------KLDGG-----SMERPNVISWSAVIG 385
+E + +F++++ ++D + + + I W+ +I
Sbjct: 236 NPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEICWTTMIV 295
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
+A NGR E+A LF M V +S TIS ++S CA+ A+L G+ +HG VV + ++
Sbjct: 296 GYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDN 355
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
++LV + L++MY KCG + ++FE + +++ITWN+MI GY NG AL +E M
Sbjct: 356 SMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQ 415
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
+ FKPD + FV VLSAC +A +V EG++ FD + E I P ++HYACM+ LLGR+G +
Sbjct: 416 QENFKPDNITFVGVLSACINADMVKEGQKYFD-SISEHGIAPTLDHYACMITLLGRSGSV 474
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
+A D+++ MP EPN +W TLL+ C + AE AS +F L G Y++LSN+Y
Sbjct: 475 DKAVDLIQGMPHEPNYRIWSTLLSVC-AKGDLKNAELAASHLFELDPRNAGPYIMLSNLY 533
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
AA GRW+D A VR K K KK A SW+EV K+H F S + ++ + L L
Sbjct: 534 AACGRWKDVAVVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLI 593
Query: 686 LQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRS 745
++ G PD +I+L NV ++ R+ + + + KL L L +R
Sbjct: 594 SILQQIGYNPDTNIVL------HNVGEEEKFRS---------ISYHSEKLALAFAL-IRK 637
Query: 746 TNG 748
NG
Sbjct: 638 PNG 640
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 191/388 (49%), Gaps = 75/388 (19%)
Query: 62 SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYEN------ 115
+F+ ++L +YA+FG+L DA+NVF+ K WN++L G+ EN
Sbjct: 57 DSFIHNQLLHLYAKFGKLSDAQNVFDNM---TKRDVYSWNTLLSAYAKMGMVENLHVVFD 113
Query: 116 -------------------------ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
ALK+ V+M++ G ++ ++AC + R
Sbjct: 114 QMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRH 173
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H ++ N + N + MYAK G + + LFD + KN +SWN+M S
Sbjct: 174 ----GKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMIS 229
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF---------- 260
G+ + + + LF M+L GL+P+ VT +++L+++ RCGR+++ +LF
Sbjct: 230 GYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEIC 289
Query: 261 ----------------------DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
DM+R R ++ + I+ ++S CA LA+ + G+V+HG V
Sbjct: 290 WTTMIVGYAQNGREEDAWMLFGDMLR-RNVKPDSYTISSMVSSCAKLASLYHGQVVHGKV 348
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
+ G ++ + V +AL+ +Y K G A+ +F + +N+++WNA+I YA+ G EA+
Sbjct: 349 VVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEAL 408
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGA 386
++ ++++ + +P+ I++ V+ A
Sbjct: 409 TLYERMQQENF----KPDNITFVGVLSA 432
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 152/287 (52%), Gaps = 16/287 (5%)
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
F+ N L+ +Y K G + AQN+F + ++++ SWN L+++YA+ G+ + VF Q+
Sbjct: 59 FIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYR 118
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
D +S++ +I FASNG +AL + +MQ + L C++
Sbjct: 119 DS--------VSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLD 170
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L G++IHG +V + +N V+N + +MY KCG +++ L+F+ + K++++WN MISG
Sbjct: 171 LRHGKQIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISG 230
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
Y G + F EM +G KPD V VL+A G V++ R +F + ++ I
Sbjct: 231 YVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLPKKDEI-- 288
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNM---PMEPNAYVWGTLLNSC 591
+ M+ + G ++A + +M ++P++Y ++++SC
Sbjct: 289 ---CWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSC 332
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 151/316 (47%), Gaps = 10/316 (3%)
Query: 52 NQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNG 111
N++ ++G + VL+ Y R GR+ DARN+F P K + W +++ NG
Sbjct: 245 NEMQLSGLKPDLVTVSNVLNAYFRCGRVDDARNLFIKLP---KKDEICWTTMIVGYAQNG 301
Query: 112 LYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNV 171
E+A L+ M + V D +T ++ +C + S GQ+VH V+ MG ++
Sbjct: 302 REEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYH----GQVVHGKVVVMGIDNSM 357
Query: 172 HIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELE 231
+ + L+ MY K G D+ +F+ + ++N I+WN M G+A N AL L++RM+ E
Sbjct: 358 LVSSALVDMYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQE 417
Query: 232 GLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA-DHM 290
+P+ +T+ +LS+ ++E FD + + GI + A ++++ + D
Sbjct: 418 NFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKA 477
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
+I G + + ++ +C G + ++A + E++ +N + L YA
Sbjct: 478 VDLIQGMPHEPNYR--IWSTLLSVCAKGDLKNAELAASHLFELDPRNAGPYIMLSNLYAA 535
Query: 351 AGLCDEAVEVFSQLEK 366
G + V S +++
Sbjct: 536 CGRWKDVAVVRSLMKE 551
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 104/257 (40%), Gaps = 37/257 (14%)
Query: 422 CAESAALNIGREIHGHV-VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
CA + + + H+ + + K+ + N LL++Y K G L + VF+ + K+D+ +
Sbjct: 32 CARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYS 91
Query: 481 WNSMISGYGMNGLGENALATFEEMI-------------------------------EAGF 509
WN+++S Y G+ EN F++M E GF
Sbjct: 92 WNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGF 151
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
+P + V L ACS + G++I +V E A M D+ + G + +A
Sbjct: 152 QPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNA-MTDMYAKCGDIDKAR 210
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMAS--QIFGLITETTGSYMLLSNIYAA 627
+ M ++ N W +++ N + + + Q+ GL + +L N Y
Sbjct: 211 LLFDGM-IDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNVL-NAYFR 268
Query: 628 SGRWEDAAKVRISAKTK 644
GR +DA + I K
Sbjct: 269 CGRVDDARNLFIKLPKK 285
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 100/225 (44%), Gaps = 10/225 (4%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
+++ + VH +++V G + S +++ ++ +Y + G DAR +FET P + + WN+
Sbjct: 337 SLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPI---RNVITWNA 393
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
++ NG AL LY +M++ D TF V+ AC + GQ + +
Sbjct: 394 MILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVK----EGQKYFDSI 449
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV-RVKNYISWNMMFSGFALNFDCDGA 221
+ G + +I + + G + + L + NY W+ + S A +
Sbjct: 450 SEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCAKGDLKNAE 509
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
L EL+ N + L + +A CGR ++ + +M+++
Sbjct: 510 LAASHLFELD--PRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEK 552
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 187/535 (34%), Positives = 306/535 (57%), Gaps = 23/535 (4%)
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
NV L+ Y + ++ ++ +LFD + VKN ISWN M G+A D AL+LF++M
Sbjct: 128 NVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMP 187
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
E N V+W +++++ + R++E +LF+ M +R + +V + + D
Sbjct: 188 ----ERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDV---ISWTTMVAGLSKNGRIDD 240
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+ ++ V N +I Y ++ + A LF ++ E+ + SWN +IT +
Sbjct: 241 ARLLFDKMPVRN-----VVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFI 295
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA-KV 408
+ G + AV+ F + M NV++W+AVI +GR EEAL +F +MQ A V
Sbjct: 296 QNGKLERAVDFFYK--------MSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNV 347
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
N T +L C++ AAL G++IH + + + V + L+NMY KCG LE
Sbjct: 348 KPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARK 407
Query: 469 VFEQ--IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
+F+ I +D+++WN MI+ Y +G G A++ F+EM GF+PD V ++A+LSACSHA
Sbjct: 408 IFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHA 467
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GLV+EG ++F+ +VR+ I+ + +H+ C+VDL GRAG LQEA D +K + ++P+A VW
Sbjct: 468 GLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAA 527
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL C +H + D+ + A ++ E G+Y++LSNIYA++G+W +AA VR+ K KGL
Sbjct: 528 LLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGL 587
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
KK G SWIEV +H+F G++ + +N+ +L +L +M+ G D+ +
Sbjct: 588 KKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKIGHTLYEDLTI 642
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 181/365 (49%), Gaps = 49/365 (13%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S Y R+ R+ +AR +F+ P + + WN+++ G + AL L+ KM + V
Sbjct: 135 LVSGYVRWNRIEEARRLFDAMPV---KNVISWNTMIEGYARKGWIDQALDLFEKMPERNV 191
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ ++ VI A FM R R Q + N + + +V ++ +K G++
Sbjct: 192 V----SWNTVITA--FMQ--RRRVDEAQELFNRMPER----DVISWTTMVAGLSKNGRID 239
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP------------- 235
D+ LFDK+ V+N +SWN M G+A N D A +LF++M L
Sbjct: 240 DARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGK 299
Query: 236 --------------NFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLS 280
N VTWT+++S H + GR EE + +F +M ++ VL
Sbjct: 300 LERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLG 359
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE--IEEKNI 338
C+ LAA G+ IH + K +++ V +ALI +Y K G++++A+ +F + I +++
Sbjct: 360 ACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDV 419
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
VSWN +I +YA G +A+ +F +++ L RP+ +++ A++ A + G +E L
Sbjct: 420 VSWNGMIAAYAHHGHGHKAISLFDEMQALGF----RPDNVTYIALLSACSHAGLVDEGLK 475
Query: 399 LFRKM 403
LF +
Sbjct: 476 LFENL 480
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 174/355 (49%), Gaps = 29/355 (8%)
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
A ++F+ M + + V+WT++++ + +CG +EE LFD R I+ A+V
Sbjct: 85 ARQVFEEMP----DRDVVSWTAVITGYIKCGMIEEAKTLFD--RNDAIKNVVTWTALVSG 138
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
+ ++ +K V N +I Y + G + A +LF ++ E+N+VS
Sbjct: 139 YVRWNRIEEARRLFDAMPVKN-----VISWNTMIEGYARKGWIDQALDLFEKMPERNVVS 193
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
WN +IT++ + DEA E+F+++ + D VISW+ ++ + NGR ++A LF
Sbjct: 194 WNTVITAFMQRRRVDEAQELFNRMPERD--------VISWTTMVAGLSKNGRIDDARLLF 245
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
KM + VV+ + I G A + ++ + + N ++ +++
Sbjct: 246 DKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMP--------ERELSSWNTMITGFIQN 297
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA-GFKPDGVAFVAV 519
G LE F ++ K+++TW ++ISG+ +G E AL F EM A KP+ FV+V
Sbjct: 298 GKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSV 357
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
L ACS + EG++I ++ + E + + ++++ + G L+ A I +
Sbjct: 358 LGACSKLAALCEGQQIHQIISKTVYQEVA-DVVSALINMYSKCGELELARKIFDD 411
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 136/279 (48%), Gaps = 25/279 (8%)
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
N LI GK G + A+ +F E+ ++++VSW A+IT Y + G+ +EA +F + + +
Sbjct: 70 NWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAI--- 126
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
NV++W+A++ + R EEA LF M + V++ + I G AL++
Sbjct: 127 ----KNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDL 182
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
++ +N++ N ++ +M+ ++E +F ++ ++D+I+W +M++G
Sbjct: 183 FEKMP--------ERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSK 234
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
NG ++A F++M V++ ++ + ++E ++F+ M E ++
Sbjct: 235 NGRIDDARLLFDKMPVRNV----VSWNTMIIGYAQNMRLDEAFKLFEQMP-----ERELS 285
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ M+ + G L+ A D M N W +++
Sbjct: 286 SWNTMITGFIQNGKLERAVDFFYKMS-NKNVVTWTAVIS 323
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
+I V S N N+ N L+ K G + E VFE++ +D+++W ++I+GY G
Sbjct: 52 KISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCG 111
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
+ E A F+ K + V + A++S + E RR+FD M + I +
Sbjct: 112 MIEEAKTLFDR--NDAIK-NVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVIS-----W 163
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
M++ R G + +A D+ + MP E N W T++ + + D A+ +
Sbjct: 164 NTMIEGYARKGWIDQALDLFEKMP-ERNVVSWNTVITAFMQRRRVDEAQEL 213
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 131/309 (42%), Gaps = 31/309 (10%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L C + L +Q+H + T A + + ++++Y++ G L AR +F+
Sbjct: 354 FVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGS 413
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + WN ++ +G A+ L+ +M+ LG D T+ ++ AC G
Sbjct: 414 IGHR-DVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDE 472
Query: 151 RFS-FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMM 208
F +V + +++ H L+ ++ + G++ ++F + VK S W +
Sbjct: 473 GLKLFENLVRDRSIKLRED---HFTC-LVDLFGRAGRLQEAFDFIKGLEVKPSASVWAAL 528
Query: 209 FSGFALNFDCD-GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
+G ++ D G L K +E E N T+ L + +A G+ E + M+ +G
Sbjct: 529 LAGCNVHGHIDLGKLTAEKLLETE--PENAGTYLVLSNIYASTGKWREAAGVRMKMKDKG 586
Query: 268 I--EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV-K 324
+ + G I V G +H FV+ G + +N + ++ H + K
Sbjct: 587 LKKQPGCSWIEV-------------GNTVHVFVV--GDNSHREFENIYLLLHDLHTKMKK 631
Query: 325 VAQNLFSEI 333
+ L+ ++
Sbjct: 632 IGHTLYEDL 640
>gi|125582503|gb|EAZ23434.1| hypothetical protein OsJ_07125 [Oryza sativa Japonica Group]
Length = 596
Score = 343 bits (879), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 193/546 (35%), Positives = 311/546 (56%), Gaps = 28/546 (5%)
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G VH +++ + + N L+ +YA + + S FD + KN S+N + + A
Sbjct: 47 LGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLPHKNAHSYNSLLAALA 106
Query: 214 LNFDCDGALELFKRMELEGLEP---NFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGI- 268
G L R+ L+G+ P N V++ +++SS AR GR E + +F + R RG+
Sbjct: 107 RG---RGTLPDALRL-LDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLARDRGLG 162
Query: 269 --EVGAEAIAVV--LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
+V + VV S CA L + +HG V+ G E V + NA++ Y K G V+
Sbjct: 163 QQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVE 222
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A+ +F ++ ++ VSW ++I Y A + D+AV+VF + D I+W+A+I
Sbjct: 223 DARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDA--------IAWTALI 274
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
NG E AL+LF +M VV + L CA+ + G+E+HG ++R S+
Sbjct: 275 SGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIG 334
Query: 445 K---NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
N+ + N L++MY KCG + VF+++ ++D+I+WNSM++G+ NG G+ +LA F
Sbjct: 335 SDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQSLAVF 394
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
E M++ +P V F+AVL+ACSHAGLV++GRRI + M ++ +EP+ EHYA +D LGR
Sbjct: 395 ERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESM-QDHGVEPRAEHYAAFIDALGR 453
Query: 562 AGLLQEASDIVKNMPME---PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
L+EAS+ +K + + WG LL +C +H N ++AE +A +F L E +G Y
Sbjct: 454 NRQLEEASEFIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALFQLEPENSGRY 513
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
++LSNIY+A+G+W+DA +VR K KGL+K SWIEV+R HMF + ++ + +
Sbjct: 514 VMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMFVADDTSHHEANEIY 573
Query: 679 EVLEEL 684
E+L++L
Sbjct: 574 EMLDKL 579
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 174/374 (46%), Gaps = 43/374 (11%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD--------- 92
+ L+++H ++V+G + +A ++ Y++ GR+ DAR VF+
Sbjct: 184 RDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMI 243
Query: 93 ---CKSS----------------SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
C++S ++ W +++ + NG E AL+L+ +M GV+ F
Sbjct: 244 AGYCRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPF 303
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG---NVHIVNELIGMYAKMGQMSDS 190
+ AC +G + G+ VH +L+ NV I N LI MY+K G M +
Sbjct: 304 ALVSCLGACAKVG----LVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAA 359
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
+FD++ ++ ISWN M +GF+ N +L +F+RM + ++P +VT+ ++L++ +
Sbjct: 360 MAVFDRMLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHA 419
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA-DLAADHMGKVIHGFVIKGGFEDYVFV 309
G + + + + M+ G+E AE A + + + + I G K G
Sbjct: 420 GLVSDGRRILESMQDHGVEPRAEHYAAFIDALGRNRQLEEASEFIKGLSSKIGL-GTTGS 478
Query: 310 KNALICVYGKHGDVKVAQNLFS---EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
AL+ HG++++A+ + ++E +N + L Y+ AG D+A +V + ++
Sbjct: 479 WGALLGACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMK- 537
Query: 367 LDGGSMERPNVISW 380
G + + SW
Sbjct: 538 --GKGLRKDQAYSW 549
>gi|222636858|gb|EEE66990.1| hypothetical protein OsJ_23896 [Oryza sativa Japonica Group]
Length = 659
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 197/581 (33%), Positives = 302/581 (51%), Gaps = 64/581 (11%)
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
Y +M K GVL D FT+P V+RAC + G+ VH H G GN+ N L+
Sbjct: 138 YQEMGKNGVLPDVFTYPSVLRAC----AEARELVLGRAVHMHAAGAGMDGNLFFQNALMS 193
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MYAK G ++ + K+FD + ++ +SWN M S +A A+ELF+RM EG EP
Sbjct: 194 MYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEP---- 249
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
+ L M + G EV + + L+ C+ + +GK IHG +
Sbjct: 250 -----------------VGLIREMVRGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAV 292
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
+ + V NALI +Y + D++ A+ LF +E +V+WN +++S+A + +EA
Sbjct: 293 RMCCDQVESVSNALITMYARCKDMECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASS 352
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
+ FR+M V N VT+ L
Sbjct: 353 I---------------------------------------FREMICRGVKPNYVTVVTYL 373
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
++CA A L G+E+HGH+V+ L+ N L++MY K G L VF+ ++ D+I
Sbjct: 374 ALCARVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMI 433
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
++ SMI+GYGM G G AL FE+MI++G KPD + V VLSACSH+GLV EG +F+ M
Sbjct: 434 SYTSMIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKM 493
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
V + I+PQMEHY+CM+DL RAGLL++A +++ + P P + +W L+ +C N ++
Sbjct: 494 VISYGIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIEI 553
Query: 600 AEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKR 659
E A ++ + TE G Y+L++N+YAA+G W++ A VR + G+ K G +W ++
Sbjct: 554 GERAARKLLEMRTENAGHYVLIANMYAAAGCWDELATVRKLMRDLGVTKAPGLAWTDLGN 613
Query: 660 KIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
F G+ + VL+EL+ QM N D DI+
Sbjct: 614 GFTPFLVGDRSNPLAPEIYVVLDELSEQMRNINNCSDLDIL 654
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 138/613 (22%), Positives = 244/613 (39%), Gaps = 141/613 (23%)
Query: 27 NNSLLDCFDH--LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFD 81
N L D F + +L+ C +L + VH G + + F ++S+YA+ G L
Sbjct: 144 NGVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAKCGDLAS 203
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG----------VLG- 130
AR VF+ + + WNS++ + G + A++L+ +MR G V G
Sbjct: 204 ARKVFDGM---VQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEPVGLIREMVRGG 260
Query: 131 ---DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
D T + + AC +G R G+ +H ++M + N LI MYA+ M
Sbjct: 261 AEVDYVTLVIGLNACSRVGWLR----LGKEIHGLAVRMCCDQVESVSNALITMYARCKDM 316
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
+ LF + ++WN M S FAL+ + A +F+ M G++PN+VT
Sbjct: 317 ECARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVT-------- 368
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
+ L++CA +A G+ +HG ++K GF+ Y
Sbjct: 369 ---------------------------VVTYLALCARVANLQHGQELHGHIVKHGFKGYR 401
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
+ N+LI +Y K G + VAQN+F +++ +++S+ ++I Y G A+ +F Q+ +
Sbjct: 402 LLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTVALRLFEQM--I 459
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
D G +P+ I V+ A + +G E +LF KM
Sbjct: 460 DSGI--KPDHIIMVTVLSACSHSGLVLEGEELFNKM------------------------ 493
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
V+ + + + ++++Y + G LE+
Sbjct: 494 ----------VISYGIKPQMEHYSCMIDLYARAGLLEKA--------------------- 522
Query: 488 YGMNGLGENALATFEEMIE-AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
EEM++ F P + A++ AC G + G R ++ E R E
Sbjct: 523 --------------EEMLDHTPFPPTSTMWAALVGACHDRGNIEIGERAARKLL-EMRTE 567
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMP----MEPNAYVWGTLLNSCRMHKNTDVAEA 602
HY + ++ AG E + + K M + W L N D +
Sbjct: 568 -NAGHYVLIANMYAAAGCWDELATVRKLMRDLGVTKAPGLAWTDLGNGFTPFLVGDRSNP 626
Query: 603 MASQIFGLITETT 615
+A +I+ ++ E +
Sbjct: 627 LAPEIYVVLDELS 639
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 219/686 (31%), Positives = 338/686 (49%), Gaps = 103/686 (15%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S+YA+ GR+ ARN+F+ P + + + WN+++ + NG ++ A KL+V M +
Sbjct: 12 MISVYAKNGRINAARNLFDKMP---RRNLVSWNTMVSGYLHNGKFDEAYKLFVIMPRR-- 66
Query: 129 LGDGFTFPLVIRACKFMGSF-RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
D F++ L+I G + R F L ++ V N +I Y K G++
Sbjct: 67 --DLFSWTLMITCYTRNGEVEKARELFDS------LPCSYRKGVACWNAMISGYVKKGRV 118
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME------------------ 229
+++ +LFD++ VKN ISWN M +G+ N LE F M+
Sbjct: 119 NEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVG 178
Query: 230 ---------LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
E +PN V+W ++LS AR G + E+ LFD M R I I+ +
Sbjct: 179 DLDSAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQ 238
Query: 281 VCADLAADHM------------GKVIHGFVIKGGFEDY---------------------- 306
C A + +I+G+V G ++
Sbjct: 239 RCEIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGAQTAMISGY 298
Query: 307 --------------------VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
V NA+I Y HG + A L + K++V+WN +I+
Sbjct: 299 IQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRMVNKDMVTWNTMIS 358
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
YA+ G D AV++F ++ + D ++SW+++I F NG+ +AL F M
Sbjct: 359 CYAQVGQMDRAVKIFEEMGERD--------LVSWNSLIAGFMLNGQNLDALKSFALMGHE 410
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
+ ++ + LS CA AAL +G ++H VV+ ++V N L+ MY KCG + E
Sbjct: 411 GKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEA 470
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
LVF I D+I+WNS+I GY +NG G+ AL FEEM G PD V F+ +LSAC+HA
Sbjct: 471 GLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILSACNHA 530
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
G+V+ G ++F M + + IEP EHYACMVDLLGR G L EA +IV+ M ++ A VWG
Sbjct: 531 GMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKVKATAGVWGA 590
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL +CR H N ++ A ++ T +Y+LLSNI+A + RW + +VR+
Sbjct: 591 LLGACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSNIHAEANRWNEVQEVRMLMNASST 650
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQS 672
K G SW+EV+ ++H F S +S +S
Sbjct: 651 VKEPGCSWVEVRNQVHGFLSDDSTRS 676
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 194/409 (47%), Gaps = 72/409 (17%)
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ N N +I +YAK G+++ + LFDK+ +N +SWN M SG+ N D A +LF
Sbjct: 3 EKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVI 62
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM---RKRGIEVGAEAIAVVLSVCAD 284
M L +WT +++ + R G +E+ +LFD + ++G+ C +
Sbjct: 63 MPRRDL----FSWTLMITCYTRNGEVEKARELFDSLPCSYRKGV------------ACWN 106
Query: 285 LAADHMGKVIHGFVIKGGFE------DYVFVK-----NALICVYGKHGDVKVAQNLFSEI 333
+I G+V KG D + VK N+++ Y ++ +++ F+E+
Sbjct: 107 -------AMISGYVKKGRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEM 159
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
+E+++VSWN ++ + + G D A + F + +K PNV+SW ++ FA NG
Sbjct: 160 DERDVVSWNLMVDGFIQVGDLDSAWKFFQETQK--------PNVVSWVTMLSGFARNGNI 211
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE------------IHGHV--- 438
E+ LF +M +V+ + IS + C A + E I+G+V
Sbjct: 212 LESRRLFDQMPSRNIVSWNAMISAYVQRCEIDEASRLFEEMPERDSVSWTTMINGYVRIG 271
Query: 439 ----VRVSMN----KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
R +N +NI Q +++ Y++C ++E F++I D++ WN+MI+GY
Sbjct: 272 KLDEARELLNEMPYRNIGAQTAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAH 331
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+G AL + M+ D V + ++S + G ++ +IF+ M
Sbjct: 332 HGRINEALCLSKRMV----NKDMVTWNTMISCYAQVGQMDRAVKIFEEM 376
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 142/289 (49%), Gaps = 29/289 (10%)
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
E N++I VY K+G + A+NLF ++ +N+VSWN +++ Y G DEA ++F
Sbjct: 3 EKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFV- 61
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA---KVVANSVTISGLLS 420
M R ++ SW+ +I + NG E+A +LF + + V + ISG +
Sbjct: 62 -------IMPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVK 114
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
+ A + E+ KN++ N +L Y + + G F +++++D+++
Sbjct: 115 KGRVNEAKRLFDEMPV--------KNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVS 166
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WN M+ G+ G ++A F+E KP+ V++V +LS + G + E RR+FD M
Sbjct: 167 WNLMVDGFIQVGDLDSAWKFFQETQ----KPNVVSWVTMLSGFARNGNILESRRLFDQMP 222
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ + M+ + + EAS + + MP E ++ W T++N
Sbjct: 223 SR-----NIVSWNAMISAYVQRCEIDEASRLFEEMP-ERDSVSWTTMIN 265
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 33/241 (13%)
Query: 38 LQQCKTIHQLKQVHNQL---IVTGANASAFLAARVL-SIYARFGRLFDARNVFETAPFDC 93
L C TI L QV NQL +V G + + L ++YA+ GR+ +A VF C
Sbjct: 423 LSSCATIAAL-QVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVFNGI---C 478
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + WNS++ NG + ALKL+ +M G+ D TF ++ AC G
Sbjct: 479 HADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILSACNHAG------- 531
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYA-------KMGQMSDSFKLFDKVRVKNYIS-W 205
+V + + V+ + L YA ++G++ ++F++ ++VK W
Sbjct: 532 ---MVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKVKATAGVW 588
Query: 206 NMMFSGFALNFDCDGALEL--FKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDM 262
+ + G LEL +L EP+ + LLS+ HA R E ++ +
Sbjct: 589 GALLGACRAH----GNLELGRLAAHKLSEFEPHKTSNYVLLSNIHAEANRWNEVQEVRML 644
Query: 263 M 263
M
Sbjct: 645 M 645
>gi|115446683|ref|NP_001047121.1| Os02g0555100 [Oryza sativa Japonica Group]
gi|113536652|dbj|BAF09035.1| Os02g0555100 [Oryza sativa Japonica Group]
Length = 596
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 193/546 (35%), Positives = 311/546 (56%), Gaps = 28/546 (5%)
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G VH +++ + + N L+ +YA + + S FD + KN S+N + + A
Sbjct: 47 LGAAVHALLVKTALTHHTLLSNRLVALYALLPTPAASLAAFDDLPHKNAHSYNSLLAALA 106
Query: 214 LNFDCDGALELFKRMELEGLEP---NFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGI- 268
G L R+ L+G+ P N V++ +++SS AR GR E + +F + R RG+
Sbjct: 107 RG---RGTLPDALRL-LDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLARDRGLG 162
Query: 269 --EVGAEAIAVV--LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
+V + VV S CA L + +HG V+ G E V + NA++ Y K G V+
Sbjct: 163 QQQVAIDRFTVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVE 222
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A+ +F ++ ++ VSW ++I Y A + D+AV+VF + D I+W+A+I
Sbjct: 223 DARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQDA--------IAWTALI 274
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
NG E AL+LF +M VV + L CA+ + G+E+HG ++R S+
Sbjct: 275 SGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIG 334
Query: 445 K---NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
N+ + N L++MY KCG + VF+++ ++D+I+WNSM++G+ NG G+ +LA F
Sbjct: 335 SDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMVTGFSHNGQGKQSLAVF 394
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
E M++ +P V F+AVL+ACSHAGLV++GRRI + M ++ +EP+ EHYA +D LGR
Sbjct: 395 ERMLKDEVQPTYVTFLAVLTACSHAGLVSDGRRILESM-QDHGVEPRAEHYAAFIDALGR 453
Query: 562 AGLLQEASDIVKNMPME---PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
L+EAS+ +K + + WG LL +C +H N ++AE +A +F L E +G Y
Sbjct: 454 NRQLEEASEFIKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALFQLEPENSGRY 513
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
++LSNIY+A+G+W+DA +VR K KGL+K SWIEV+R HMF + ++ + +
Sbjct: 514 VMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMFVADDTSHHEANEIY 573
Query: 679 EVLEEL 684
E+L++L
Sbjct: 574 EMLDKL 579
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 173/370 (46%), Gaps = 43/370 (11%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD------------C 93
L+++H ++V+G + +A ++ Y++ GR+ DAR VF+ C
Sbjct: 188 HLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYC 247
Query: 94 KSS----------------SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPL 137
++S ++ W +++ + NG E AL+L+ +M GV+ F
Sbjct: 248 RASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVS 307
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG---NVHIVNELIGMYAKMGQMSDSFKLF 194
+ AC +G + G+ VH +L+ NV I N LI MY+K G M + +F
Sbjct: 308 CLGACAKVG----LVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVF 363
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
D++ ++ ISWN M +GF+ N +L +F+RM + ++P +VT+ ++L++ + G +
Sbjct: 364 DRMLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAGLVS 423
Query: 255 ETMDLFDMMRKRGIEVGAEAIAVVLSVCA-DLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
+ + + M+ G+E AE A + + + + I G K G AL
Sbjct: 424 DGRRILESMQDHGVEPRAEHYAAFIDALGRNRQLEEASEFIKGLSSKIGL-GTTGSWGAL 482
Query: 314 ICVYGKHGDVKVAQNLFS---EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
+ HG++++A+ + ++E +N + L Y+ AG D+A +V + ++ G
Sbjct: 483 LGACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMK---GK 539
Query: 371 SMERPNVISW 380
+ + SW
Sbjct: 540 GLRKDQAYSW 549
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 199/657 (30%), Positives = 327/657 (49%), Gaps = 88/657 (13%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
L +C ++Q+KQ+H Q++ + + F+ +++S ++ ++ A N F + +
Sbjct: 27 LHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATNAFNQVQY---PNV 83
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
L+N+++R + N A + M++ G D FTFP +++ C + +
Sbjct: 84 HLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVC----TGNVWLPVIES 139
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
VH + + GF +V + N LI Y+K G S
Sbjct: 140 VHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGIS--------------------------- 172
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIA 276
A +LF M G + V+W S++S A+ G EE +FD M K GI
Sbjct: 173 --AAKKLFVSM---GARRDVVSWNSMISGLAKGGLYEEARKVFDEMPEKDGIS------- 220
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
++ G+V G +D A LF E+ E+
Sbjct: 221 -------------WNTMLDGYVKVGKMDD--------------------AFKLFDEMPER 247
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
N+VSW+ ++ Y +AG + A +F + M N++SW+ ++ FA G EA
Sbjct: 248 NVVSWSTMVLGYCKAGDMEMARMLFDK--------MPVKNLVSWTIIVSGFAEKGLAREA 299
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
+ LF +M+ A + ++ T+ +L+ CAES L +G +IH + + + N L++M
Sbjct: 300 ISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDM 359
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCG L + VF I+ KD+++WN+M+ G M+G G AL F+ M E GF P+ V
Sbjct: 360 YAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTM 419
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
+ VL AC+HAGL+++G R F M R++ + P++EHY CMVDLLGR G L+EA +++NMP
Sbjct: 420 IGVLCACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMP 479
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAK 636
M PNA +WGTLL +CRMH ++A + + L +G++ +LSNIYAA+G W A
Sbjct: 480 MAPNAIIWGTLLGACRMHNAVELAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVAN 539
Query: 637 VRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
R+ ++ G KK +G S IEV ++H F+ + N+ +V+ L +++ C
Sbjct: 540 TRLRMRSIGTKKPSGASSIEVNNEVHEFTVFDRSHPKSDNIYQVINGLRHELKQVEC 596
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 203/665 (30%), Positives = 339/665 (50%), Gaps = 108/665 (16%)
Query: 78 RLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPL 137
+LFD N K+ + LWN +++ S GLY A++ Y +M GV D FT+P
Sbjct: 85 QLFDEMN---------KADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPF 135
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
VI++ + S G+ +H V+++GF +V++ N LI +Y K+G D+ K+F+++
Sbjct: 136 VIKSVAGISSLEE----GKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
++ +SWN M SG+ D +L LFK M G +P
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKP---------------------- 229
Query: 258 DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED-YVFVKNALICV 316
D F M L C+ + + MGK IH ++ E V V +++ +
Sbjct: 230 DRFSTMS-------------ALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDM 276
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK---------- 366
Y K+G+V A+ +F+ + ++NIV+WN +I YA G +A F ++ +
Sbjct: 277 YSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVIT 336
Query: 367 ---------------LDGGSMER---PNVISWSAVIGAFASNG----------------- 391
+ G +M R P+++ +A+I + G
Sbjct: 337 SINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNV 396
Query: 392 --------------RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
+ AL+LF+++ + +V +S TI+ +L AES +L+ GREIH +
Sbjct: 397 ISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAY 456
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
+V+ N ++ N L++MY CG LE+ F I KD+++WNS+I Y ++G G +
Sbjct: 457 IVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRIS 516
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
+ F EMI + P+ F ++L+ACS +G+V+EG F+ M RE+ I+P +EHY CM+D
Sbjct: 517 VWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLD 576
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
L+GR G A ++ MP P A +WG+LLN+ R HK+ +AE A QIF + + TG
Sbjct: 577 LIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGC 636
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
Y+LL N+YA +GRWED ++++ ++KG+ + + +S +E K K H+F++G+ +
Sbjct: 637 YVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKI 696
Query: 678 CEVLE 682
EVL+
Sbjct: 697 YEVLD 701
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 132/242 (54%), Gaps = 11/242 (4%)
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
+A++ L ++A+++F ++ K D W+ +I F S G EA+ + +M A
Sbjct: 74 FADSRLMEDALQLFDEMNKADA--------FLWNVMIKGFTSCGLYIEAVQFYSRMVFAG 125
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
V A++ T ++ A ++L G++IH V+++ ++ V N L+++YMK GC +
Sbjct: 126 VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAE 185
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
VFE++ ++D+++WNSMISGY G G ++L F+EM++ GFKPD + ++ L ACSH
Sbjct: 186 KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVY 245
Query: 528 LVNEGRRIFDMMVREFRIEP-QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
G+ I VR RIE + ++D+ + G + A I M ++ N W
Sbjct: 246 SPKMGKEIHCHAVRS-RIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNV 303
Query: 587 LL 588
++
Sbjct: 304 MI 305
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 155/337 (45%), Gaps = 51/337 (15%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL-G 127
+L +Y+++G + A +F + + + WN ++ NG +A + KM + G
Sbjct: 273 ILDMYSKYGEVSYAERIFNGM---IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNG 329
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
+ D T ++ A + G+ +H + ++ GF ++ + LI MY + GQ+
Sbjct: 330 LQPDVITSINLLPASAILE--------GRTIHGYAMRRGFLPHMVLETALIDMYGECGQL 381
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
+ +FD++ KN ISWN + + + N ALELF+ + L P+ T S+L ++
Sbjct: 382 KSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAY 441
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
A L E G+ IH +++K +
Sbjct: 442 AESLSLSE-----------------------------------GREIHAYIVKSRYWSNT 466
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
+ N+L+ +Y GD++ A+ F+ I K++VSWN++I +YA G +V +FS++
Sbjct: 467 IILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI-- 524
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
S PN ++++++ A + +G +E + F M+
Sbjct: 525 --ASRVNPNKSTFASLLAACSISGMVDEGWEYFESMK 559
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 180/461 (39%), Positives = 276/461 (59%), Gaps = 12/461 (2%)
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA--DHMGKVIH 295
V+WTS ++ +R GRL E F MR G+E +LS C D+++ + +G ++H
Sbjct: 31 VSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVSSGSEALGDLLH 90
Query: 296 GFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
G+ K G + +V V A++ +Y K G A+ +F +E+KN V+WN +I Y +G
Sbjct: 91 GYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMIDGYMRSGQV 150
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
+ AV++F ++ + D +ISW+A+I F G EEAL FR+MQ++ V + V
Sbjct: 151 NNAVKLFDEMPERD--------LISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVA 202
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
I L+ C AL+ G +H +V+ NI V N L+++Y +CGC+E VF+++E
Sbjct: 203 IIAALAACTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKME 262
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
K+ +++WNS+I G+ NG +L F +M E GFKPD V F L+ACSH GLV EG R
Sbjct: 263 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLR 322
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F M R+ RI P++EHY C+VDL RAG L++A ++V++MPM+PN V G+LL +CR H
Sbjct: 323 YFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVIGSLLAACRNH 382
Query: 595 -KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
NT +AE + + L ++ +Y++LSN+YAA G WE A+K+R K GLKK G S
Sbjct: 383 GNNTVLAERLVKHLSDLNVKSHSNYVILSNMYAADGIWEGASKMRRKMKGLGLKKQPGFS 442
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
+E+ H+F +G+S + + EVLE ++ + +GCV
Sbjct: 443 SVEIDDCTHVFMAGDSAHVETAYIREVLELISSDLRLQGCV 483
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 168/325 (51%), Gaps = 11/325 (3%)
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+++ W S + + NG A K + MR GV + TF ++ C + S + G
Sbjct: 29 TTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVSSGSE--ALG 86
Query: 156 QIVHNHVLQMGF-QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
++H + ++G + +V + ++GMY+K G+ + +FD + KN ++WN M G+
Sbjct: 87 DLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMIDGYMR 146
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
+ + A++LF M E + ++WT++++ + G EE + F M+ G++ A
Sbjct: 147 SGQVNNAVKLFDEMP----ERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVA 202
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
I L+ C L A G +H +V+ F++ + V N+LI +Y + G V+ A+ +F ++E
Sbjct: 203 IIAALAACTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKME 262
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
++ +VSWN++I +A G E++ F ++++ +P+ ++++ + A + G E
Sbjct: 263 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQE----EGFKPDAVTFTGALTACSHVGLVE 318
Query: 395 EALDLFRKMQLAKVVANSVTISGLL 419
E L F+ M+ ++ + G L
Sbjct: 319 EGLRYFQTMKRDHRISPRIEHYGCL 343
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 104/193 (53%), Gaps = 7/193 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y R G++ +A +F+ P + + W +++ V G +E AL + +M+ GV D
Sbjct: 144 YMRSGQVNNAVKLFDEMP---ERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDY 200
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
+ AC +G+ SFG VH +V+ F+ N+ + N LI +Y + G + + +
Sbjct: 201 VAIIAALAACTHLGAL----SFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFARE 256
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+FDK+ + +SWN + GFA N + +L F++M+ EG +P+ VT+T L++ + G
Sbjct: 257 VFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGL 316
Query: 253 LEETMDLFDMMRK 265
+EE + F M++
Sbjct: 317 VEEGLRYFQTMKR 329
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 215/692 (31%), Positives = 345/692 (49%), Gaps = 118/692 (17%)
Query: 75 RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFT 134
+F DAR +F K S WN++L+ +E L + M + D FT
Sbjct: 6 KFSSSVDARQMFGEM---TKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFT 62
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQ-MGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
P+ ++AC G R ++G+++H V + + ++++ + LI MY K G+M ++ ++
Sbjct: 63 LPVALKAC---GELR-EVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRM 118
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL-EGLEPNFVTWTSLLSSHARCGR 252
FD++ + ++W+ M SGF N A+E F+RM + + P+ VT +L+S+
Sbjct: 119 FDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSA------ 172
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
C L+ +G+ +HGFVI+ GF + + + N+
Sbjct: 173 -----------------------------CTKLSNSRLGRCVHGFVIRRGFSNDLSLVNS 203
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
L+ Y K K A NLF I EK+++SW+ +I Y + G EA+ VF+ + +D G+
Sbjct: 204 LLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDM--MDDGT- 260
Query: 373 ERPNVISWSAVIGAFAS-----NGR------------------------------GEEAL 397
PNV + V+ A A+ GR EEA
Sbjct: 261 -EPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 319
Query: 398 DLFRKMQLAKVVANSVTISG--------------------------------LLSVCAES 425
+F ++ VV+ ISG +L C+E
Sbjct: 320 AVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSEL 379
Query: 426 AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMI 485
L + H +V++ + N + L+ +Y +CG L VF I KD + W S+I
Sbjct: 380 GFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLI 439
Query: 486 SGYGMNGLGENALATFEEMIEAG-FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
+GYG++G G AL TF M+++ KP+ V F+++LSACSHAGL++EG RIF +MV ++R
Sbjct: 440 TGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYR 499
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
+ P +EHYA +VDLLGR G L A +I K MP P + GTLL +CR+H+N ++AE +A
Sbjct: 500 LAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVA 559
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
++F L + G YML+SN+Y G WE+ K+R S K +G+KK +S IE++RK+H F
Sbjct: 560 KKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRF 619
Query: 665 SSGNSLQSDLKNVCEVLEELALQMEN--KGCV 694
+ + L + + V +L+EL L M+ + CV
Sbjct: 620 VADDELHPEKEPVYGLLKELDLHMKEDLENCV 651
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 180/368 (48%), Gaps = 45/368 (12%)
Query: 211 GFALNFDCD-GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
GF F A ++F M L W +LL S +R + EE + F M + +
Sbjct: 2 GFCRKFSSSVDARQMFGEMTKRSL----YQWNTLLKSLSREKQWEEVLYHFSHMFRDEEK 57
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
+ V L C +L + G++IHGFV K DV + +L
Sbjct: 58 PDNFTLPVALKACGELREVNYGEMIHGFVKK---------------------DVTLGSDL 96
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
+ ++LI Y + G EA+ +F +LEK P++++WS+++ F
Sbjct: 97 YV---------GSSLIYMYIKCGRMIEALRMFDELEK--------PDIVTWSSMVSGFEK 139
Query: 390 NGRGEEALDLFRKMQLAK-VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
NG +A++ FR+M +A V + VT+ L+S C + + +GR +HG V+R + ++
Sbjct: 140 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 199
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
+ N LLN Y K +E +F+ I +KD+I+W+++I+ Y NG AL F +M++ G
Sbjct: 200 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 259
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+P+ + VL AC+ A + +GR+ ++ +R+ +E +++ +VD+ + +EA
Sbjct: 260 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEEA 318
Query: 569 SDIVKNMP 576
+ +P
Sbjct: 319 YAVFSRIP 326
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 111/234 (47%), Gaps = 16/234 (6%)
Query: 37 LLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+LQ C H L+Q H I G ++ ++ +Y + +A VF P
Sbjct: 270 VLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP--- 326
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + W +++ NG+ +++ + M L + T P I K +GS
Sbjct: 327 RKDVVSWVALISGFTLNGMAHRSIEEFSIM-----LLENNTRPDAILMVKVLGSCS-ELG 380
Query: 154 F---GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
F + H++V++ GF N I L+ +Y++ G + ++ K+F+ + +K+ + W + +
Sbjct: 381 FLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLIT 440
Query: 211 GFALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
G+ ++ ALE F M + ++PN VT+ S+LS+ + G + E + +F +M
Sbjct: 441 GYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494
>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Brachypodium distachyon]
Length = 851
Score = 342 bits (878), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 198/699 (28%), Positives = 354/699 (50%), Gaps = 39/699 (5%)
Query: 48 KQVHNQLIVTG-ANASAFLAARVLSIYARFGRLFDARNVFETA-PFDCKSSSLLWNSILR 105
Q+H+ + G A +A + + AR GR +R + E A + ++LWN +
Sbjct: 83 PQLHSLAVRAGHATREPRVACALSDLLARLGRGPSSRRLLEEADESEGGKDAVLWNKQVA 142
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
+ G ++ A+ + +M+ GV DG+ V+ AC + R G+ VH H L+
Sbjct: 143 MLAEAGEWDEAIGAFREMQARGVAADGYALARVLHACGRAAARRE----GKAVHAHALKA 198
Query: 166 GF-QGNVHIVNELIGMYAKMGQMSDSFK-LFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
G + + L GMYA+ ++ + L ++W+ + + D A+E
Sbjct: 199 GLVDAHPLVPGFLAGMYAEGADVAAATAVLLRATPPPRSVAWDAVVACCVRLGLVDDAME 258
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
L RM +G EP TW ++LS AR GR E + + M ++G+ A ++ +L A
Sbjct: 259 LAGRMARDGPEPTLATWNAVLSGCARHGRDREALAVLRRMLEQGLWPDATTVSSLLKSVA 318
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
+ G +H F ++ G + AL+ +Y K G + A+ +F +E +N+ +WN+
Sbjct: 319 NAGMVRHGMEVHCFFLRHGLVPDAYTGTALVDMYAKCGRLDCARRVFDTLEHRNLATWNS 378
Query: 344 LITSYAEAGLCDEAVEVFSQLEK------------------LDGGSME------------ 373
L+ +A AG + A+E+ ++++ L+G S +
Sbjct: 379 LVAGHAYAGQFEAALELVERMKRNRLDPNVTTWNGLITGYSLNGLSSQAMLLLRQIKAAG 438
Query: 374 -RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
PNV+SW+++I NG E++ + F++MQ V + VT+ LL CA A L G+
Sbjct: 439 LTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRACAGLALLKKGK 498
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
E+H +R + + +++V L++MY K G L +F +I+ K+L+ N+M++G ++G
Sbjct: 499 ELHCFALRRAYDCDMVVGTALIDMYSKAGSLTSAKRIFGRIQNKNLVCCNAMLTGLAVHG 558
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
A+ F ++ +G KPD + F A+L+AC GL+ EG FD M ++ + P E+Y
Sbjct: 559 QSHEAITLFHDLWRSGLKPDSITFTALLTACRSMGLITEGWEYFDNMETKYGVVPTAENY 618
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
ACMVDLL R+G L EA +++ P++P A +WG LL C +H N D+AE A +F L
Sbjct: 619 ACMVDLLARSGYLDEAMALIERSPVDPGASLWGALLTGCSIHGNLDLAEVAARNLFRLEP 678
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
+ +Y+++ ++Y +++A ++ + K +G+ G SWI++++ IH+F S
Sbjct: 679 YNSANYLMIMSLYEHEQMYDEADSLKYAMKARGVNTRPGWSWIQIEQGIHVFEVDGSPHP 738
Query: 673 DLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVK 711
+ +CE L L Q++ G VPD +++ + ++ K
Sbjct: 739 ETAEICEELMSLVRQIKMTGYVPDTSCVVYNVPEEEKEK 777
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 181/467 (38%), Positives = 275/467 (58%), Gaps = 12/467 (2%)
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL--AADHMGKVIH 295
V+WTS ++ +R RL E F MR GIE +LS C + ++ + ++H
Sbjct: 34 VSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFISLLSACGNFPSGSEALSDLLH 93
Query: 296 GFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
G+ K G + +V V A++ +Y K G V+ A+ +F +E+KN V+WN +I Y G
Sbjct: 94 GYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDKNSVTWNTMIDGYMRNGQV 153
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
D AV+VF ++ + D +ISW+A+I F G EEAL FR+MQ++ V + V
Sbjct: 154 DNAVKVFDEMPERD--------LISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVA 205
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
I L+ C AL+ G H +VV N+ V N L+++Y +CGC+E VF+ +E
Sbjct: 206 IIAALAACTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDTME 265
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
K+ +++WNS+I G+ NG +L F +M E GFKPD V F L+ACSH GLV EG +
Sbjct: 266 KRTVVSWNSVIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGFQ 325
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F MM ++RI P++EH+ C+VDL RAG L++A +V++MPM+PN V G+LL +CR H
Sbjct: 326 YFQMMKTDYRISPRIEHFGCLVDLYSRAGRLEDAIKVVESMPMKPNEVVIGSLLAACRNH 385
Query: 595 KN-TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
N T +AE + I L + +Y++LSN+YAA G+WE A+K+R K GLKK G S
Sbjct: 386 GNHTILAERLMKHISDLDVKGHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGYS 445
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
IE+ H+F +G++ + + EVLE ++ + +GCV +D++
Sbjct: 446 SIEIDDYTHVFMAGDNAHVETAYIREVLEVISYDLRLQGCVIASDLV 492
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 155/306 (50%), Gaps = 11/306 (3%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
W S + + + A + + MR G+ + TF ++ AC S S ++H
Sbjct: 36 WTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFISLLSACGNFPSGSEALS--DLLH 93
Query: 160 NHVLQMGF-QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
+ ++G + +V + ++GMY+K G + + +FD + KN ++WN M G+ N
Sbjct: 94 GYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDKNSVTWNTMIDGYMRNGQV 153
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
D A+++F M E + ++WT++++ + G EE + F M+ G+ AI
Sbjct: 154 DNAVKVFDEMP----ERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIAA 209
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
L+ C +L A G H +V+ F + V V N+LI +Y + G V+ A+ +F +E++ +
Sbjct: 210 LAACTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDTMEKRTV 269
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
VSWN++I +A G +E++ F ++++ +P+ ++++ + A + G EE
Sbjct: 270 VSWNSVIVGFAANGNANESLVYFRKMQE----EGFKPDAVTFTGALTACSHVGLVEEGFQ 325
Query: 399 LFRKMQ 404
F+ M+
Sbjct: 326 YFQMMK 331
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y R G++ +A VF+ P + + W +++ V G +E AL + +M+ GV D
Sbjct: 147 YMRNGQVDNAVKVFDEMP---ERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDY 203
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
+ AC +G+ SFG H +V+ F+ NV + N LI +Y + G + + +
Sbjct: 204 VAIIAALAACTNLGAL----SFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQ 259
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+FD + + +SWN + GFA N + + +L F++M+ EG +P+ VT+T L++ + G
Sbjct: 260 VFDTMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTGALTACSHVGL 319
Query: 253 LEETMDLFDMMR 264
+EE F MM+
Sbjct: 320 VEEGFQYFQMMK 331
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 125/248 (50%), Gaps = 22/248 (8%)
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
+ IVSW + IT + EA FS + +L G PN I++ +++ A + G E
Sbjct: 31 ETIVSWTSRITLLSRDDRLAEAAREFSDM-RLAG---IEPNHITFISLLSACGNFPSGSE 86
Query: 396 AL-DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM------NKNIL 448
AL DL + S + G +A L + + GHV + + +KN +
Sbjct: 87 ALSDLLHGYACKLGLDRSHVMVG-------TAILGMYSK-RGHVRKARLVFDYMEDKNSV 138
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
N +++ YM+ G ++ VF+++ ++DLI+W +MI+G+ G E ALA F EM +G
Sbjct: 139 TWNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQISG 198
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV-REFRIEPQMEHYACMVDLLGRAGLLQE 567
PD VA +A L+AC++ G ++ G +V ++FR ++ + ++DL R G ++
Sbjct: 199 VNPDYVAIIAALAACTNLGALSFGLWAHRYVVSQDFRNNVRVSN--SLIDLYCRCGCVEF 256
Query: 568 ASDIVKNM 575
A + M
Sbjct: 257 ARQVFDTM 264
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 211/701 (30%), Positives = 351/701 (50%), Gaps = 53/701 (7%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L CK I L+ Q+H ++ G ++ ++ ++S+Y G L A ++F
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ ++ +N+++ G E A++L+ +M G+ D T ++ AC G+ F
Sbjct: 351 ---QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL-F 406
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
R GQ +H + ++GF N I L+ +YAK + + F + V+N + WN+M
Sbjct: 407 R---GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
+ L D + +F++M++E + PN T+ S+L + R G LE + + K ++
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 271 GAEAIAVVLSVCA-----DLAADHM----GK-VIHGFVIKGGFEDYVFVKNALICVY--- 317
A +V++ + A D A D + GK V+ + G+ Y F AL
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 318 --GKHGDVKVAQNLFS------------EIEEKNIVS--------WNALITSYAEAGLCD 355
G D N S +I + VS NAL+T Y+ G +
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
E+ F Q E D I+W+A++ F +G EEAL +F +M + N+ T
Sbjct: 644 ESYLAFEQTEAGDN--------IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
+ +E+A + G+++H + + + V N L++MY KCG + + F ++
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
K+ ++WN++I+ Y +G G AL +F++MI + +P+ V V VLSACSH GLV++G
Sbjct: 756 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
F+ M E+ + P+ EHY C+VD+L RAGLL A + ++ MP++P+A VW TLL++C +HK
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
N ++ E A + L E + +Y+LLSN+YA S +W+ R K KG+KK GQSWI
Sbjct: 876 NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
EVK IH F G+ + E ++L + G V D
Sbjct: 936 EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD 976
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 145/601 (24%), Positives = 270/601 (44%), Gaps = 114/601 (18%)
Query: 37 LLQQC----KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
LL+ C ++ + +++H+Q++ G +++ L+ ++ Y G L+ A VF+ P
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMP-- 147
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ + WN +++ S L L+V+M V + TF V+ AC+ GS F
Sbjct: 148 -ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR-GGSVAFDV 205
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
+ +H +L G + + + N LI +Y++ G + + ++FD +R+K++ SW M SG
Sbjct: 206 V--EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 263
Query: 213 ALNFDCDG-ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+ N +C+ A+ LF M + G+ P ++S
Sbjct: 264 SKN-ECEAEAIRLFCDMYVLGIMPTPYAFSS----------------------------- 293
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
VLS C + + +G+ +HG V+K GF +V NAL+ +Y G++ A+++FS
Sbjct: 294 ------VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG------------------GSME 373
+ +++ V++N LI ++ G ++A+E+F ++ LDG G++
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH-LDGLEPDSNTLASLVVACSADGTLF 406
Query: 374 RPNVISWSAVIGAFASNGRGEEAL------------------------------------ 397
R + FASN + E AL
Sbjct: 407 RGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYG 466
Query: 398 ---------DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
+FR+MQ+ ++V N T +L C L +G +IH +++ + N
Sbjct: 467 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 526
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
V + L++MY K G L+ + + KD+++W +MI+GY + AL TF +M++ G
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIF-DMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
+ D V +SAC+ + EG++I V F + ++ +V L R G ++E
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN--ALVTLYSRCGKIEE 644
Query: 568 A 568
+
Sbjct: 645 S 645
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/627 (21%), Positives = 269/627 (42%), Gaps = 110/627 (17%)
Query: 34 FDHLLQQCK----TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA 89
F +L+ C+ ++Q+H +++ G S + ++ +Y+R G + AR VF+
Sbjct: 189 FSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
SS W +++ N A++L+ M LG++ + F V+ ACK + S
Sbjct: 249 RLKDHSS---WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 305
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+ +H VL++GF + ++ N L+ +Y +G N IS +F
Sbjct: 306 I----GEQLHGLVLKLGFSSDTYVCNALVSLYFHLG---------------NLISAEHIF 346
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
S + + + VT+ +L++ ++CG E+ M+LF M G+E
Sbjct: 347 SNMS--------------------QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE-----------------------DY 306
+ +A ++ C+ G+ +H + K GF DY
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 307 --------VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV----SWNALITSYAEAG-- 352
V + N ++ YG D++ + +F +++ + IV ++ +++ + G
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 353 --------------------LCDEAVEVFSQLEKLDGG-----SMERPNVISWSAVIGAF 387
+C ++++++L KLD +V+SW+ +I +
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
++AL FR+M + ++ V ++ +S CA AL G++IH + ++
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 626
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
QN L+ +Y +CG +EE +L FEQ E D I WN+++SG+ +G E AL F M
Sbjct: 627 PFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE 686
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
G + F + + A S + +G+++ ++ + + + E ++ + + G + +
Sbjct: 687 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISD 745
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMH 594
A + + N W ++N+ H
Sbjct: 746 AEKQFLEVSTK-NEVSWNAIINAYSKH 771
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 99/244 (40%), Gaps = 49/244 (20%)
Query: 408 VVANSVTISGLLSVCAES-AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
+ N T+ LL C ++ +L+ GR++H ++++ ++ N + L + Y+ G L
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC--- 523
VF+++ ++ + TWN MI L F M+ P+ F VL AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 524 ---------------------------------SHAGLVNEGRRIFDMMVREFRIEPQME 550
S G V+ RR+FD + R++
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL----RLKDH-S 254
Query: 551 HYACMVDLLGRAGLLQEASDIVKNM---PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
+ M+ L + EA + +M + P Y + ++L++C+ ++ ++ E Q+
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE----QL 310
Query: 608 FGLI 611
GL+
Sbjct: 311 HGLV 314
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 182/467 (38%), Positives = 276/467 (59%), Gaps = 12/467 (2%)
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL--AADHMGKVIH 295
V+WTS ++ +R GRL E + F MR GIE +LS C + ++ +G ++H
Sbjct: 22 VSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSACGNFPSGSEGLGYLLH 81
Query: 296 GFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
G+ K G E +V V A++ +Y K G ++ A+ +F IE+KN V+WN +I Y G
Sbjct: 82 GYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYMRNGQV 141
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
D AV+VF ++ D +ISW+A+I F G EEAL FR+MQ++ V + V
Sbjct: 142 DNAVDVFDKMPDRD--------LISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVA 193
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
I ++ C AL+ G +H +V+ N+ V N L+++Y +CGC+E VF+++E
Sbjct: 194 IISAVAACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKME 253
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
K+ +++WNS+I G+ NG +L F +M GF PDGV F L+ACSH GLV EG +
Sbjct: 254 KRTVVSWNSVIVGFAANGNANESLVYFRKMQREGFTPDGVTFTGALTACSHVGLVEEGFQ 313
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F MM ++RI P++EHY C+VDL RAG L++A +V++MPM+PN V G+LL +CR H
Sbjct: 314 YFQMMKHDYRISPRIEHYGCLVDLYSRAGRLEDAFIVVESMPMKPNEVVIGSLLAACRNH 373
Query: 595 KN-TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
N T +AE + I L ++ +Y++LSN+YAA G+WE A+K+R K GLKK G S
Sbjct: 374 GNHTILAERLMKYITDLDVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGYS 433
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
IE+ H+F +G+S + + EVLE ++ + + CV + I
Sbjct: 434 SIEIDDCTHVFMAGDSAHVETAYIREVLELISSDLRLQCCVIETPAI 480
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 178/382 (46%), Gaps = 53/382 (13%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF-RFSFGQIV 158
W S + + +G A++ + MR G+ + TF ++ AC G+F G ++
Sbjct: 24 WTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSAC---GNFPSGSEGLGYLL 80
Query: 159 HNHVLQMGFQ-GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
H + ++G + +V + ++GMY+K G + + +FD + KN ++WN M G+ N
Sbjct: 81 HGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYMRNGQ 140
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
D A+++F +M + + ++WT++++ + G EE + F M+ G+ AI
Sbjct: 141 VDNAVDVFDKMP----DRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIS 196
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
++ C +L A G +H +V+ F + V V N+LI +Y + G V+ A+ +F ++E++
Sbjct: 197 AVAACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRT 256
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
+VSWN++I +A G +E +L
Sbjct: 257 VVSWNSVIVGFAANGNANE---------------------------------------SL 277
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIG---REIHGHVVRVSMNKNILVQNGLL 454
FRKMQ + VT +G L+ C+ + G ++ H R+S I L+
Sbjct: 278 VYFRKMQREGFTPDGVTFTGALTACSHVGLVEEGFQYFQMMKHDYRIS--PRIEHYGCLV 335
Query: 455 NMYMKCGCLEEGHLVFEQIEKK 476
++Y + G LE+ +V E + K
Sbjct: 336 DLYSRAGRLEDAFIVVESMPMK 357
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 7/192 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y R G++ +A +VF+ P + W +++ V G +E AL + +M+ GV D
Sbjct: 135 YMRNGQVDNAVDVFDKMP---DRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDY 191
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
+ AC +G+ SFG VH +VL F+ NV + N LI +Y + G + + +
Sbjct: 192 VAIISAVAACTNLGAL----SFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQ 247
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+FDK+ + +SWN + GFA N + + +L F++M+ EG P+ VT+T L++ + G
Sbjct: 248 VFDKMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQREGFTPDGVTFTGALTACSHVGL 307
Query: 253 LEETMDLFDMMR 264
+EE F MM+
Sbjct: 308 VEEGFQYFQMMK 319
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 124/248 (50%), Gaps = 39/248 (15%)
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
+++KL+ + E ++SW++ I + +GR EA+ F M+LA + N +T LLS C
Sbjct: 9 KIQKLNQSTSE--TIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSAC 66
Query: 423 A--ESAALNIGREIHGHVVRVSMNK-NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
S + +G +HG+ ++ + + +++V +L MY K G L + LVF+ IE K+ +
Sbjct: 67 GNFPSGSEGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSV 126
Query: 480 TWNSMISGYGMN-------------------------------GLGENALATFEEMIEAG 508
TWN+MI GY N G E ALA F EM +G
Sbjct: 127 TWNTMIDGYMRNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISG 186
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFD-MMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
PD VA ++ ++AC++ G ++ G + ++ ++FR ++ + ++DL R G ++
Sbjct: 187 VNPDYVAIISAVAACTNLGALSFGLWVHRYVLSQDFRNNVRVSN--SLIDLYCRCGCVEF 244
Query: 568 ASDIVKNM 575
A + M
Sbjct: 245 ARQVFDKM 252
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
Q + +++W S I+ +G A+ F +M AG +P+ + F+A+LSAC + +E
Sbjct: 15 QSTSETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSACGNFPSGSE 74
Query: 532 GRRIFDMMVREFRIEPQMEHYACMV-----DLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
G ++ + + +E MV + ++G L++A +V + + N+ W T
Sbjct: 75 G---LGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKAR-LVFDYIEDKNSVTWNT 130
Query: 587 LLN 589
+++
Sbjct: 131 MID 133
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 342 bits (876), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 203/685 (29%), Positives = 351/685 (51%), Gaps = 113/685 (16%)
Query: 26 YNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNV 85
++ +L + L++QCK+ + LKQ+H Q+++ FL ++++ +
Sbjct: 28 HHQTLTEKLLSLIKQCKSKNLLKQIHAQMLINSIPKPNFLLSKIIDLK------------ 75
Query: 86 FETAPFDCKSSSLLWNSILRVNVS------NGL------YENALKLYVKMRKLGVLGDGF 133
D +SL++N + + N+ GL Y+ ++LY K++ LG+ + F
Sbjct: 76 ------DLAYASLVFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNF 129
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
T+P + AC G+ R G+I H V + G G+ ++ + LI MYA+ G+M + K+
Sbjct: 130 TYPFLFIAC---GNVR-GLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKV 185
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FD++ + + V+W S++S +++ G
Sbjct: 186 FDEMG-----------------------------------DRDLVSWNSMISGYSKMGFT 210
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
+E + LF MR+ G E + VL C DL +G+ + GFV++ E ++ +AL
Sbjct: 211 KEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSAL 270
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
I +YGK GD+ A+ +F SM
Sbjct: 271 IDMYGKCGDLISARRVFD---------------------------------------SMP 291
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
+V++W+A+I +A NG EA+ LF M+ A + VT+ +LS C+ AL++G+
Sbjct: 292 NKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKW 351
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+ H + ++ V + L++MY KCG L++ VFE + K+ ++WN+MIS +G
Sbjct: 352 VETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQ 411
Query: 494 GENALATFEEMIE--AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
+ AL+ F M + +P+ + F+ VLSAC HAGLV+EGR++F+ M F + P++EH
Sbjct: 412 AQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEH 471
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
Y+CMVDL RAGLL EA D++K MP +P+ V G+LL +C+ +N DV E + +
Sbjct: 472 YSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEME 531
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
+G+Y++ S IYA RW+D+AK+R+ + G+ K G SWI++ +H F +G+SL
Sbjct: 532 LSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAHVHEFHAGDSLH 591
Query: 672 SDLKNVCEVLEELALQMENKGCVPD 696
+ N+ ++L E +M+ +G +P+
Sbjct: 592 NHSMNIYQLLNE---EMKREGYIPN 613
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 342 bits (876), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 211/701 (30%), Positives = 351/701 (50%), Gaps = 53/701 (7%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L CK I L+ Q+H ++ G ++ ++ ++S+Y G L A ++F
Sbjct: 251 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 310
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ ++ +N+++ G E A++L+ +M G+ D T ++ AC G+ F
Sbjct: 311 ---QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL-F 366
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
R GQ +H + ++GF N I L+ +YAK + + F + V+N + WN+M
Sbjct: 367 R---GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 423
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
+ L D + +F++M++E + PN T+ S+L + R G LE + + K ++
Sbjct: 424 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 483
Query: 271 GAEAIAVVLSVCA-----DLAADHM----GK-VIHGFVIKGGFEDYVFVKNALICVY--- 317
A +V++ + A D A D + GK V+ + G+ Y F AL
Sbjct: 484 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 543
Query: 318 --GKHGDVKVAQNLFS------------EIEEKNIVS--------WNALITSYAEAGLCD 355
G D N S +I + VS NAL+T Y+ G +
Sbjct: 544 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 603
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
E+ F Q E D I+W+A++ F +G EEAL +F +M + N+ T
Sbjct: 604 ESYLAFEQTEAGDN--------IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 655
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
+ +E+A + G+++H + + + V N L++MY KCG + + F ++
Sbjct: 656 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 715
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
K+ ++WN++I+ Y +G G AL +F++MI + +P+ V V VLSACSH GLV++G
Sbjct: 716 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 775
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
F+ M E+ + P+ EHY C+VD+L RAGLL A + ++ MP++P+A VW TLL++C +HK
Sbjct: 776 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 835
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
N ++ E A + L E + +Y+LLSN+YA S +W+ R K KG+KK GQSWI
Sbjct: 836 NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 895
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
EVK IH F G+ + E ++L + G V D
Sbjct: 896 EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD 936
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 145/601 (24%), Positives = 270/601 (44%), Gaps = 114/601 (18%)
Query: 37 LLQQC----KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
LL+ C ++ + +++H+Q++ G +++ L+ ++ Y G L+ A VF+ P
Sbjct: 50 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMP-- 107
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ + WN +++ S L L+V+M V + TF V+ AC+ GS F
Sbjct: 108 -ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR-GGSVAFDV 165
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
+ +H +L G + + + N LI +Y++ G + + ++FD +R+K++ SW M SG
Sbjct: 166 V--EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 223
Query: 213 ALNFDCDG-ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+ N +C+ A+ LF M + G+ P ++S
Sbjct: 224 SKN-ECEAEAIRLFCDMYVLGIMPTPYAFSS----------------------------- 253
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
VLS C + + +G+ +HG V+K GF +V NAL+ +Y G++ A+++FS
Sbjct: 254 ------VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 307
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG------------------GSME 373
+ +++ V++N LI ++ G ++A+E+F ++ LDG G++
Sbjct: 308 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH-LDGLEPDSNTLASLVVACSADGTLF 366
Query: 374 RPNVISWSAVIGAFASNGRGEEAL------------------------------------ 397
R + FASN + E AL
Sbjct: 367 RGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYG 426
Query: 398 ---------DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
+FR+MQ+ ++V N T +L C L +G +IH +++ + N
Sbjct: 427 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 486
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
V + L++MY K G L+ + + KD+++W +MI+GY + AL TF +M++ G
Sbjct: 487 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 546
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIF-DMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
+ D V +SAC+ + EG++I V F + ++ +V L R G ++E
Sbjct: 547 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN--ALVTLYSRCGKIEE 604
Query: 568 A 568
+
Sbjct: 605 S 605
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/627 (21%), Positives = 269/627 (42%), Gaps = 110/627 (17%)
Query: 34 FDHLLQQCK----TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA 89
F +L+ C+ ++Q+H +++ G S + ++ +Y+R G + AR VF+
Sbjct: 149 FSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 208
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
SS W +++ N A++L+ M LG++ + F V+ ACK + S
Sbjct: 209 RLKDHSS---WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 265
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+ +H VL++GF + ++ N L+ +Y +G N IS +F
Sbjct: 266 I----GEQLHGLVLKLGFSSDTYVCNALVSLYFHLG---------------NLISAEHIF 306
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
S + + + VT+ +L++ ++CG E+ M+LF M G+E
Sbjct: 307 SNMS--------------------QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 346
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE-----------------------DY 306
+ +A ++ C+ G+ +H + K GF DY
Sbjct: 347 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 406
Query: 307 --------VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV----SWNALITSYAEAG-- 352
V + N ++ YG D++ + +F +++ + IV ++ +++ + G
Sbjct: 407 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 466
Query: 353 --------------------LCDEAVEVFSQLEKLDGG-----SMERPNVISWSAVIGAF 387
+C ++++++L KLD +V+SW+ +I +
Sbjct: 467 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 526
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
++AL FR+M + ++ V ++ +S CA AL G++IH + ++
Sbjct: 527 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 586
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
QN L+ +Y +CG +EE +L FEQ E D I WN+++SG+ +G E AL F M
Sbjct: 587 PFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE 646
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
G + F + + A S + +G+++ ++ + + + E ++ + + G + +
Sbjct: 647 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISD 705
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMH 594
A + + N W ++N+ H
Sbjct: 706 AEKQFLEVSTK-NEVSWNAIINAYSKH 731
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 99/244 (40%), Gaps = 49/244 (20%)
Query: 408 VVANSVTISGLLSVCAES-AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
+ N T+ LL C ++ +L+ GR++H ++++ ++ N + L + Y+ G L
Sbjct: 40 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 99
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC--- 523
VF+++ ++ + TWN MI L F M+ P+ F VL AC
Sbjct: 100 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 159
Query: 524 ---------------------------------SHAGLVNEGRRIFDMMVREFRIEPQME 550
S G V+ RR+FD + R++
Sbjct: 160 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL----RLKDH-S 214
Query: 551 HYACMVDLLGRAGLLQEASDIVKNM---PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
+ M+ L + EA + +M + P Y + ++L++C+ ++ ++ E Q+
Sbjct: 215 SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE----QL 270
Query: 608 FGLI 611
GL+
Sbjct: 271 HGLV 274
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 342 bits (876), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 187/535 (34%), Positives = 305/535 (57%), Gaps = 23/535 (4%)
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
NV L+ Y + ++ ++ +LFD + VKN ISWN M G+A D AL+LF+ M
Sbjct: 128 NVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMP 187
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
E N V+W +++++ + R++E +LF+ M +R + +V + + D
Sbjct: 188 ----ERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDV---ISWTTMVAGLSKNGRIDD 240
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+ ++ V N +I Y ++ + A LF ++ E+ + SWN +IT +
Sbjct: 241 ARLLFDKMPVRN-----VVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFI 295
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA-KV 408
+ G + AV+ F + M NV++W+AVI +GR EEAL +F +MQ A V
Sbjct: 296 QNGKLERAVDFFYK--------MSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNV 347
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
N T +L C++ AAL G++IH + + + V + L+NMY KCG LE
Sbjct: 348 KPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARK 407
Query: 469 VFEQ--IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
+F+ I +D+++WN MI+ Y +G G A++ F+EM GF+PD V ++A+LSACSHA
Sbjct: 408 IFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHA 467
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GLV+EG ++F+ +VR+ I+ + +H+ C+VDL GRAG LQEA D +K + ++P+A VW
Sbjct: 468 GLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAA 527
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL C +H + D+ + A ++ E G+Y++LSNIYA++G+W +AA VR+ K KGL
Sbjct: 528 LLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGL 587
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
KK G SWIEV +H+F G++ + +N+ +L +L +M+ G D+ +
Sbjct: 588 KKQPGCSWIEVGNTVHVFVVGDNSHREFENIYLLLHDLHTKMKKIGHTLYEDLTI 642
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 180/365 (49%), Gaps = 49/365 (13%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S Y R+ R+ +AR +F+ P + + WN+++ G + AL L+ M + V
Sbjct: 135 LVSGYVRWNRIEEARRLFDAMPV---KNVISWNTMIEGYARKGWIDQALDLFEXMPERNV 191
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ ++ VI A FM R R Q + N + + +V ++ +K G++
Sbjct: 192 V----SWNTVITA--FMQ--RRRVDEAQELFNRMPER----DVISWTTMVAGLSKNGRID 239
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP------------- 235
D+ LFDK+ V+N +SWN M G+A N D A +LF++M L
Sbjct: 240 DARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGFIQNGK 299
Query: 236 --------------NFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLS 280
N VTWT+++S H + GR EE + +F +M ++ VL
Sbjct: 300 LERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLG 359
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE--IEEKNI 338
C+ LAA G+ IH + K +++ V +ALI +Y K G++++A+ +F + I +++
Sbjct: 360 ACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGSIGHRDV 419
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
VSWN +I +YA G +A+ +F +++ L RP+ +++ A++ A + G +E L
Sbjct: 420 VSWNGMIAAYAHHGHGHKAISLFDEMQALGF----RPDNVTYIALLSACSHAGLVDEGLK 475
Query: 399 LFRKM 403
LF +
Sbjct: 476 LFENL 480
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 173/355 (48%), Gaps = 29/355 (8%)
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
A ++F+ M + + V+WT++++ + +CG +EE LFD R I+ A+V
Sbjct: 85 ARQVFEEMP----DRDVVSWTAVITGYIKCGMIEEAKTLFD--RNDAIKNVVTWTALVSG 138
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
+ ++ +K V N +I Y + G + A +LF + E+N+VS
Sbjct: 139 YVRWNRIEEARRLFDAMPVKN-----VISWNTMIEGYARKGWIDQALDLFEXMPERNVVS 193
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
WN +IT++ + DEA E+F+++ + D VISW+ ++ + NGR ++A LF
Sbjct: 194 WNTVITAFMQRRRVDEAQELFNRMPERD--------VISWTTMVAGLSKNGRIDDARLLF 245
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
KM + VV+ + I G A + ++ + + N ++ +++
Sbjct: 246 DKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMP--------ERELSSWNTMITGFIQN 297
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA-GFKPDGVAFVAV 519
G LE F ++ K+++TW ++ISG+ +G E AL F EM A KP+ FV+V
Sbjct: 298 GKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSV 357
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
L ACS + EG++I ++ + E + + ++++ + G L+ A I +
Sbjct: 358 LGACSKLAALCEGQQIHQIISKTVYQEVA-DVVSALINMYSKCGELELARKIFDD 411
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 135/279 (48%), Gaps = 25/279 (8%)
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
N LI GK G + A+ +F E+ ++++VSW A+IT Y + G+ +EA +F + + +
Sbjct: 70 NWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFDRNDAI--- 126
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
NV++W+A++ + R EEA LF M + V++ + I G AL++
Sbjct: 127 ----KNVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDL 182
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
+ +N++ N ++ +M+ ++E +F ++ ++D+I+W +M++G
Sbjct: 183 FEXMP--------ERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGLSK 234
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
NG ++A F++M V++ ++ + ++E ++F+ M E ++
Sbjct: 235 NGRIDDARLLFDKMPVRNV----VSWNTMIIGYAQNMRLDEAFKLFEQMP-----ERELS 285
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ M+ + G L+ A D M N W +++
Sbjct: 286 SWNTMITGFIQNGKLERAVDFFYKMS-NKNVVTWTAVIS 323
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 9/171 (5%)
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
+I V S N N+ N L+ K G + E VFE++ +D+++W ++I+GY G
Sbjct: 52 KISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCG 111
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
+ E A F+ K + V + A++S + E RR+FD M + I +
Sbjct: 112 MIEEAKTLFDR--NDAIK-NVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVIS-----W 163
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
M++ R G + +A D+ + MP E N W T++ + + D A+ +
Sbjct: 164 NTMIEGYARKGWIDQALDLFEXMP-ERNVVSWNTVITAFMQRRRVDEAQEL 213
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 131/309 (42%), Gaps = 31/309 (10%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L C + L +Q+H + T A + + ++++Y++ G L AR +F+
Sbjct: 354 FVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGS 413
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + WN ++ +G A+ L+ +M+ LG D T+ ++ AC G
Sbjct: 414 IGHR-DVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDE 472
Query: 151 RFS-FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMM 208
F +V + +++ H L+ ++ + G++ ++F + VK S W +
Sbjct: 473 GLKLFENLVRDRSIKLRED---HFTC-LVDLFGRAGRLQEAFDFIKGLEVKPSASVWAAL 528
Query: 209 FSGFALNFDCD-GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
+G ++ D G L K +E E N T+ L + +A G+ E + M+ +G
Sbjct: 529 LAGCNVHGHIDLGKLTAEKLLETE--PENAGTYLVLSNIYASTGKWREAAGVRMKMKDKG 586
Query: 268 I--EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV-K 324
+ + G I V G +H FV+ G + +N + ++ H + K
Sbjct: 587 LKKQPGCSWIEV-------------GNTVHVFVV--GDNSHREFENIYLLLHDLHTKMKK 631
Query: 325 VAQNLFSEI 333
+ L+ ++
Sbjct: 632 IGHTLYEDL 640
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 341 bits (875), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 206/669 (30%), Positives = 341/669 (50%), Gaps = 52/669 (7%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
Q+H +I F+ ++ YA G L AR VF+ + + + W S++
Sbjct: 154 QIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMS---ERNVVSWTSMICGYA 210
Query: 109 SNGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
++A+ L+ +M R V+ + T VI AC + G+ V++ + G
Sbjct: 211 RREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLET----GEKVYDFIRDSGI 266
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ N +++ L+ MY K + + +LFD+ N N M S +
Sbjct: 267 EVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYV-------------- 312
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
R G +E + + ++M GI ++ +S C+ L
Sbjct: 313 ---------------------RQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRN 351
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
GK HG+V++ GFE + + NALI +Y K A +F + K +V+WN+++
Sbjct: 352 ILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAG 411
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
Y E G D A E F+ +M N++SW+ +I A EEA+++F MQ +
Sbjct: 412 YIENGEVDAAWETFN--------TMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQSQE 463
Query: 408 VV-ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
V + VT+ + S C AL++ + I+ ++ + + ++ + L++M+ +CG E
Sbjct: 464 CVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESA 523
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
+F + +D+ W + I M G E A+ F EMIE G KPDGV F+ L+AC H
Sbjct: 524 MSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHG 583
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GLV +G+ IF+ M + + P+ HY CMVDLLGRAGLL+EA ++K+MP EPN +W +
Sbjct: 584 GLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNS 643
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL +CR+ N ++A A +I L E TGSY+LLSN+YA++GRW D AKVR+S K KGL
Sbjct: 644 LLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGL 703
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMG 706
+K G S I+++ K H F+SG+ +++ + +L+EL+ + + G VPD +L ++
Sbjct: 704 RKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQRASDLGHVPDLSNVLMDVDE 763
Query: 707 KKNVKRIQR 715
++ + + R
Sbjct: 764 QEKIFMLSR 772
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 143/305 (46%), Gaps = 41/305 (13%)
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
A E+F+ E G + SL+ +A G +E + LF M GI LS
Sbjct: 85 AKEVFENGESYG---TCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLS 141
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
VCA G IHG +IK + +FV+N+L+ Y + G++ A+ +F E+ E+N+VS
Sbjct: 142 VCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVS 201
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
W ++I YA +AV++F F
Sbjct: 202 WTSMICGYARREFAKDAVDLF--------------------------------------F 223
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
R ++ V+ NSVT+ ++S CA+ L G +++ + + N L+ + L++MYMKC
Sbjct: 224 RMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKC 283
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
++ +F++ +L N+M S Y GL + AL M+++G +PD ++ ++ +
Sbjct: 284 NAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAI 343
Query: 521 SACSH 525
S+CS
Sbjct: 344 SSCSQ 348
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 192/426 (45%), Gaps = 58/426 (13%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
++ C + L+ +V++ + +G + + + ++ +Y + + A+ +F+ +
Sbjct: 241 VISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFD----EY 296
Query: 94 KSSSL-LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+S+L L N++ V GL + AL + M G+ D + I +C + + +
Sbjct: 297 GASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILW-- 354
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ H +VL+ GF+ +I N LI MY K + +F++FD++ K ++WN + +G+
Sbjct: 355 --GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGY 412
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGIEVG 271
N + D A E F M E N V+W +++S+ + EE +++F M+ + + V
Sbjct: 413 IENGEVDAAWETFNTMP----EKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVD 468
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
+ + S C L A + K I+ ++ K + V + L+ ++ + GD + A ++F+
Sbjct: 469 GVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFN 528
Query: 332 EIEEKNIVSW--------------------NALI---------------TSYAEAGLCDE 356
+ +++ +W N +I T+ GL +
Sbjct: 529 SLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQ 588
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
E+F+ +EKL G S P + + ++ G EEAL L + M N V +
Sbjct: 589 GKEIFNSMEKLHGVS---PEDVHYGCMVDLLGRAGLLEEALQLIKDMPTE---PNDVIWN 642
Query: 417 GLLSVC 422
LL+ C
Sbjct: 643 SLLAAC 648
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 123/240 (51%), Gaps = 21/240 (8%)
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVV 439
++++I +AS+G +EA+ LF +M + + + T LSVCA+S G +IHG ++
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLII 160
Query: 440 RVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
++ K++ VQN L++ Y +CG L+ VF+++ ++++++W SMI GY ++A+
Sbjct: 161 KMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVD 220
Query: 500 TFEEMI-EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
F M+ + P+ V V V+SAC+ + G +++D +R+ IE + +VD+
Sbjct: 221 LFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYD-FIRDSGIEVNDLMISALVDM 279
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF--GLITETTG 616
+ A DI K + E A N D+ AMAS GL E G
Sbjct: 280 YMKCN----AIDIAKRLFDEYGA-------------SNLDLCNAMASNYVRQGLTKEALG 322
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 112/239 (46%), Gaps = 16/239 (6%)
Query: 28 NSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
N+L+D + +Q ++ N+ +VT + +++ Y G + A F
Sbjct: 375 NALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNS--------IVAGYIENGEVDAAWETFN 426
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG-DGFTFPLVIRACKFMG 146
T P + + + WN+I+ V +YE A++++ M+ + DG T + AC +G
Sbjct: 427 TMP---EKNIVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLG 483
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
+ + ++ ++ + Q +V + L+ M+++ G + +F+ + ++ +W
Sbjct: 484 AL----DLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWT 539
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
A+ + + A+ELF M +GL+P+ V + L++ G +++ ++F+ M K
Sbjct: 540 AAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEK 598
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 341 bits (875), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 208/670 (31%), Positives = 348/670 (51%), Gaps = 59/670 (8%)
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
G+L AR VF+ P + +N+++R G + A+ LY M + V + +TFP
Sbjct: 48 GQLALARQVFDRIP---APDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFP 104
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
V++AC + R G+ +H H G ++ + LI +Y + + + +F K
Sbjct: 105 FVLKACSALVDLR----AGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160
Query: 197 VRVKNYISWNMMFSGFALNFDCDGAL-ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
+ +++ ++WN M +G+A + A+ L + GL PN T SLL A+ G L +
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220
Query: 256 TMDLFDMMRKRGIEVGAEAIAV------VLSVCADLAADHMGKVIHGFVIK--------- 300
+ + +E E + + + + C L + +V HG ++
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLV--YACRVFHGMPVRNDVTWSALI 278
Query: 301 GGF-------EDYVFVKNALI---C------------VYGKHGDVKVAQNLFSEIEEKNI 338
GGF E + K+ L+ C V D+ + L + I + I
Sbjct: 279 GGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGI 338
Query: 339 ----VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
+ N+L++ YA+AGL +EA F ++ D IS+ A++ NG+ E
Sbjct: 339 HADLTASNSLLSMYAKAGLINEATMFFDEIAVKD--------TISYGALLSGCVQNGKAE 390
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
EA +F+KMQ + + T+ L+ C+ AAL G+ HG V+ + + N L+
Sbjct: 391 EAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLI 450
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCG ++ VF+++ +D+++WN+MI+GYG++GLG+ A F M GF PD V
Sbjct: 451 DMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDV 510
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F+ +++ACSH+GLV EG+ FD M ++ I P+MEHY CMVDLL R GLL EA +++
Sbjct: 511 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQS 570
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP++ + VWG LL +CR+HKN D+ + ++ I L E TG+++LLSNI++A+GR+++A
Sbjct: 571 MPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEA 630
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
A+VRI K KG KK G SWIE+ +H F G+ +++ L+ + + ++ G
Sbjct: 631 AEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQ 690
Query: 695 PDNDIILWEM 704
D +L ++
Sbjct: 691 ADTSFVLQDL 700
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 120/258 (46%), Gaps = 12/258 (4%)
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
E K+ W + + G A +VF ++ P+ +++A+I A++ G
Sbjct: 30 EVKDKKQWQQELEQHISRGQLALARQVFDRIPA--------PDARAYNALIRAYSWLGPF 81
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
A+DL+R M +V N T +L C+ L GR IH H ++ ++ V L
Sbjct: 82 HAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTAL 141
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE-AGFKPD 512
+++Y++C VF ++ +D++ WN+M++GY +G+ +A+A +M + G +P+
Sbjct: 142 IDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPN 201
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREF--RIEPQMEHYACMVDLLGRAGLLQEASD 570
V++L + G + +G I +R + E Q+ ++D+ + L A
Sbjct: 202 ASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACR 261
Query: 571 IVKNMPMEPNAYVWGTLL 588
+ MP+ N W L+
Sbjct: 262 VFHGMPVR-NDVTWSALI 278
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 341 bits (875), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 184/585 (31%), Positives = 321/585 (54%), Gaps = 60/585 (10%)
Query: 79 LFDARNVFE-----TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
+ A N+F+ T PF WN ++R + A+++Y M + G+LG+
Sbjct: 27 ILKAHNLFQQIHRPTLPF--------WNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNL 78
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
T+ + +AC + S G +H VL++GF+ ++++ N LI MY G + + K+
Sbjct: 79 TYLFLFKACARVPDV----SCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKV 134
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FD++ E + V+W SL+ + +C R
Sbjct: 135 FDEMP-----------------------------------ERDLVSWNSLVCGYGQCKRF 159
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
E + +F+ MR G++ A + V+ C L + + ++ + E V++ N L
Sbjct: 160 REVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTL 219
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
I +YG+ G V +A+ +F +++ +N+VSWNA+I Y +AG A E+F +M
Sbjct: 220 IDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFD--------AMS 271
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
+ +VISW+ +I +++ G+ EAL LF++M +KV + +T++ +LS CA + +L++G
Sbjct: 272 QRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEA 331
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
H ++ + + +I V N L++MY KCG +E+ VF+++ KKD ++W S+ISG +NG
Sbjct: 332 AHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTSIISGLAVNGF 391
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
++AL F M+ +P AFV +L AC+HAGLV++G F+ M + + ++P+M+HY
Sbjct: 392 ADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEKVYGLKPEMKHYG 451
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
C+VDLL R+G LQ A + +K MP+ P+ +W LL++ ++H N +AE ++ L
Sbjct: 452 CVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHGNIPLAEIATKKLLELDPS 511
Query: 614 TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
+G+Y+L SN YA S RWEDA K+R + ++K +G S IE++
Sbjct: 512 NSGNYVLSSNTYAGSNRWEDAVKMRELMEKSNVQKPSGSSCIEME 556
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 99/193 (51%), Gaps = 7/193 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y + G L AR +F+ + + W +++ G + AL+L+ +M + V D
Sbjct: 254 YGKAGNLVAARELFDAM---SQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDE 310
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
T V+ AC GS G+ H+++ + + ++++ N LI MY K G + + +
Sbjct: 311 ITVASVLSACAHTGSL----DVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALE 366
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+F ++R K+ +SW + SG A+N D AL+ F RM E ++P+ + +L + A G
Sbjct: 367 VFKEMRKKDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGL 426
Query: 253 LEETMDLFDMMRK 265
+++ ++ F+ M K
Sbjct: 427 VDKGLEYFESMEK 439
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 341 bits (875), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 215/698 (30%), Positives = 357/698 (51%), Gaps = 51/698 (7%)
Query: 56 VTGANASAFLAARV-LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYE 114
+ + A A +AA ++ R G + AR F+ P +S +N+++ N L +
Sbjct: 9 LPSSTAPAVVAANARIAWLVRAGNIEGARAAFDAMPLRTTAS---YNALIAGYFRNHLPD 65
Query: 115 NALKLYVKM--RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVH 172
AL L+ +M R LG + R + + +V
Sbjct: 66 AALGLFHRMPSRDLGSYN------------ALIAGLSLRRHTLPDAAAALASIPLPPSVV 113
Query: 173 IVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG 232
L+ Y + G ++D+ +LF ++ +N++++ ++ GF + A +LF M
Sbjct: 114 SFTSLLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMP--- 170
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
+ + V T++LS + + GR+ E LFD M KR + I+ GK
Sbjct: 171 -DKDVVARTAMLSGYCQAGRITEARALFDEMPKRNVVSWTAMIS---------GYAQNGK 220
Query: 293 VIHGFVIKGGFEDYVFVK-NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEA 351
VI + D V A++ Y + G V+ A++LF+ + + + + NA++ + +
Sbjct: 221 VILARKLFEVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPDHPVAACNAMMVGFGQH 280
Query: 352 GLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVAN 411
G+ D A +F ++ D G+ WSA+I + N EAL FR+M + N
Sbjct: 281 GMVDAAKAMFERMCARDDGT--------WSAMIKVYEQNEFLMEALSTFREMLCRGIRPN 332
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
+ +L+VCA A + GRE+H ++R S + ++ + L+ MY+KCG L++ VF
Sbjct: 333 YTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFN 392
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
E KD++ WNSMI+GY +GLGE AL F+++ A PDG+ ++ VL+ACS+ G V E
Sbjct: 393 MFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKE 452
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
GR IF+ M I HY+CMVDLLGRAGL+ EA D++ NMP+EP+A +WG L+ +C
Sbjct: 453 GREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGAC 512
Query: 592 RMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
RMHKN ++AE A ++ L + G Y+LLS+IY ++GRWEDA+ +R ++ L K G
Sbjct: 513 RMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPG 572
Query: 652 QSWIEVKRKIHMFSSGNSL-QSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNV 710
SWIE + +H+F+SG+ L + + +LEEL + G D +L +V
Sbjct: 573 CSWIEYNKMVHLFTSGDVLSHPEHAIILNMLEELDGLLMESGYSADGSFVL------HDV 626
Query: 711 KRIQRIRADNIKSKHRIVGFRNLK----LGLRLLLSLR 744
Q+ ++ S+ + V + LK + +R++ +LR
Sbjct: 627 DEEQKAQSLRYHSERQAVAYGLLKVPAGMPIRVMKNLR 664
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 341 bits (875), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 201/661 (30%), Positives = 337/661 (50%), Gaps = 85/661 (12%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
K++ +Q H++++ G + ++ LA +++ YA + +R VF++ + LWN
Sbjct: 37 KSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQ---HKNVFLWN 93
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
S++ N LY A +L+ +M VL D FT + + +G+ FS G+ +H
Sbjct: 94 SLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGAL---FS-GKSIHGK 149
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
+++GF + + N ++ MY K G +S K+FD++ ++N SWN++ +G+A++ +C
Sbjct: 150 SIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNC--- 206
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
NF EET + M+ + A I+ +L +
Sbjct: 207 --------------NF---------------REETWEFVKQMQMDEVRPDAYTISSLLPL 237
Query: 282 C-ADLAADHMGKVIHGFVIKG----GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
C D G+ +H +++K G + V + LI +Y + V V + +F ++ +
Sbjct: 238 CDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCR 297
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
N V SW+A+I + NG +EA
Sbjct: 298 N---------------------------------------VFSWTAMINGYVENGDSDEA 318
Query: 397 LDLFRKMQLAK-VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
L LFR MQ+ + N V++ +L C+ + L GR+IHG VR +N + + N L++
Sbjct: 319 LSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALID 378
Query: 456 MYMKCGCLEEGHLVFEQIEK-KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
MY KCG L+ VFE KD I+W+SMISGYG++G G+ A+ +++M++AG +PD +
Sbjct: 379 MYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMI 438
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
V +LSACS +GLVNEG I+ ++ ++ IEP +E +AC+VD+LGRAG L A D +K
Sbjct: 439 TTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKA 498
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP+EP VWG L++ +H + ++ E + L E +Y+ +SN+YA+S RW+
Sbjct: 499 MPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAV 558
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
A+VR K K L+KV G SWI + K H F + ++ +L++L L M + C
Sbjct: 559 AEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSATSIYNMLDDLLLTMNDAICS 618
Query: 695 P 695
P
Sbjct: 619 P 619
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 341 bits (875), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 202/669 (30%), Positives = 349/669 (52%), Gaps = 69/669 (10%)
Query: 5 LLHQPHQFSPSN-----------PSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQ 53
+L +QF+PS RP S + ++S +++ +I +K+ H
Sbjct: 20 ILSYGYQFAPSKFRAFQQALQMKLRRPISRLFTSSSTTRKCQQIIKSGFSIKSIKEQHAH 79
Query: 54 LIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC----KSSSLLWNSILRVNVS 109
LI T + + + V+ YA +R+ A F + + L++N ++R
Sbjct: 80 LIRTHHHKNPKSMSNVIKSYAL------SRSHLNKANFAFIQIGQPTLLIFNYLIRGLSQ 133
Query: 110 NGLYENALKLYVK-MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+ A+ +Y M G+LGD TF + +AC + GQ+ H VL++GF
Sbjct: 134 SENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKDVLH----GQVFHVQVLKLGFG 189
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+ I N LI MY G++ + K+FDK+
Sbjct: 190 SYLFIENSLIRMYGYFGELGYAQKVFDKMD------------------------------ 219
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
+ + V+W SL+ +++C R +E +DLF++MR+ + + + V+ C+ L D
Sbjct: 220 -----DRDLVSWNSLICGYSQCNRFKEVLDLFNLMREANVTADSVTMVKVILACSYLCED 274
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+ + ++ + V++ N+LI +YG+ G V +A+ +F ++EKNIVSWNA++T Y
Sbjct: 275 GVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLARRVFDRMQEKNIVSWNAMLTGY 334
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
A AG A ++F++ M NVISW+ +I A + +AL LF++M A V
Sbjct: 335 ATAGDLVAAKKLFNE--------MPIRNVISWTCMISGCAQANQCSDALKLFQEMMDANV 386
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+ +T+S +LS C+ L+ G+ +H ++ R + ++ V N L++MY KCG +++
Sbjct: 387 KPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDIKSDVYVGNALIDMYCKCGVVDKALE 446
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
VF ++KKD ++W SMI G +NG +N F +M+ G +P +F+ +L AC+HAGL
Sbjct: 447 VFHDMKKKDSVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSFIGILLACTHAGL 506
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
V++G F+ M + + P+M+HY C+VDLL R+G L A + +K MP+ P+ +W LL
Sbjct: 507 VDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSGELDRAYEFIKQMPVVPDVVLWRILL 566
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
++C++H+N +AE S++ L +G+Y+LLSN YA S RW+DA+++R ++K
Sbjct: 567 SACKLHRNLVLAEIATSKLLELDPSNSGNYVLLSNTYAGSDRWDDASRMRDLMVVGDVQK 626
Query: 649 VAGQSWIEV 657
+ S IEV
Sbjct: 627 PSSWSSIEV 635
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 341 bits (875), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 193/661 (29%), Positives = 342/661 (51%), Gaps = 82/661 (12%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
++++++ QVH ++ G +++ + +L Y + L A ++F+ + ++ +N
Sbjct: 153 ESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMA---EKDNVTFN 209
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
++L G +A+ L+ KM+ LG FTF V+ A M F GQ VH+
Sbjct: 210 ALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEF----GQQVHSF 265
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
V++ F NV + N L+ Y+K ++ ++ KLF ++ + IS+N++ + A N
Sbjct: 266 VVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWN------ 319
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
GR+EE+++LF ++ + A +LS+
Sbjct: 320 -----------------------------GRVEESLELFRELQFTRFDRRQFPFATLLSI 350
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
A+ MG+ IH I V V N+L+ +Y K A +F+++ ++
Sbjct: 351 AANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQS---- 406
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
+ W+A+I + G E+ L LF
Sbjct: 407 -----------------------------------SVPWTALISGYVQKGLHEDGLKLFV 431
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+M AK+ A+S T + +L CA A+L +G+++H ++R N+ + L++MY KCG
Sbjct: 432 EMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCG 491
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
++E +F+++ ++ ++WN++IS Y NG G +AL +FE+MI +G +P+ V+F+++L
Sbjct: 492 SIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILC 551
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
ACSH GLV EG + F+ M + +++EP+ EHYA MVD+L R+G EA ++ MP EP+
Sbjct: 552 ACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDE 611
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLI-TETTGSYMLLSNIYAASGRWEDAAKVRIS 640
+W ++LNSCR+HKN ++A A Q+F + Y+ +SNIYAA+G W+ KV+ +
Sbjct: 612 IMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKA 671
Query: 641 AKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
+ +G++KV SW+E+K+K H+FS+ ++ K + L+EL QME +G PD+
Sbjct: 672 LRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCA 731
Query: 701 L 701
L
Sbjct: 732 L 732
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/516 (25%), Positives = 233/516 (45%), Gaps = 78/516 (15%)
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
Q V +++ GF N N + + + G + + KLFD++ KN IS N M G+ +
Sbjct: 27 QHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKS 86
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
+ A LF M ++ + VTWT L+ +A+ R E +LF M + G+ +
Sbjct: 87 GNLSTARSLFDSM----VQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITL 142
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
A +LS + + + +HG V+K G++ + V N+L+ Y K + +A +LF + E
Sbjct: 143 ATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAE 202
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA--------- 386
K+ V++NAL+T Y++ G +A+ +F +++ L RP+ +++AV+ A
Sbjct: 203 KDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGF----RPSEFTFAAVLTAGIQMDDIEF 258
Query: 387 --------------------------FASNGRGEEALDLFRKMQLAKVVANSVTIS---- 416
++ + R EA LF +M ++ +V I+
Sbjct: 259 GQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAW 318
Query: 417 ---------------------------GLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
LLS+ A S L +GR+IH + +LV
Sbjct: 319 NGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLV 378
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
N L++MY KC E + +F + + + W ++ISGY GL E+ L F EM A
Sbjct: 379 GNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKI 438
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
D + ++L AC++ + G+++ ++R + A +VD+ + G ++EA
Sbjct: 439 GADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSA-LVDMYAKCGSIKEAL 497
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMAS 605
+ + MP+ N+ W L+++ +N D A+ S
Sbjct: 498 QMFQEMPVR-NSVSWNALISA--YAQNGDGGHALRS 530
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 186/386 (48%), Gaps = 13/386 (3%)
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
+IK GF+ N + + + GD+ A+ LF E+ KN++S N +I Y ++G A
Sbjct: 33 MIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLSTA 92
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
+F SM + +V++W+ +IG +A + R EA +LF M +V + +T++
Sbjct: 93 RSLFD--------SMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLAT 144
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
LLS E ++N ++HGHVV+V + ++V N LL+ Y K L +F+ + +KD
Sbjct: 145 LLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKD 204
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+T+N++++GY G +A+ F +M + GF+P F AVL+A + G+++
Sbjct: 205 NVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHS 264
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNT 597
+V+ + A ++D + + EA + MP E + + L+ C +
Sbjct: 265 FVVKCNFVWNVFVANA-LLDFYSKHDRIVEARKLFYEMP-EVDGISYNVLITCCAWNGRV 322
Query: 598 DVAEAMASQI-FGLITETTGSYMLLSNIYAASGRWEDAAKVRISA-KTKGLKKV-AGQSW 654
+ + + ++ F + L +I A S E ++ A T + +V G S
Sbjct: 323 EESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSL 382
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEV 680
+++ K F N + +DL + V
Sbjct: 383 VDMYAKCDKFGEANRIFADLAHQSSV 408
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 202/660 (30%), Positives = 335/660 (50%), Gaps = 89/660 (13%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+ +H + G A F+A+ + +Y + R DAR VF+T P ++LWN++L
Sbjct: 134 RTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVP---SPDTILWNTLL--- 187
Query: 108 VSNGLY-ENALKLYVKMRKLG-VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
GL AL+ +V+M G V D T +RA + G+ VH + ++
Sbjct: 188 --AGLPGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEAS----HMAMGRCVHGYGVKC 241
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
G + H+V L+ +Y+K G M D A LF
Sbjct: 242 GLAEHEHVVTGLMSLYSKCGDM-------------------------------DSAQFLF 270
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
RM+ P+ V + +L+S ++ G +E +++LF + G + + V+ V +
Sbjct: 271 DRMD----NPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPF 326
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+ + + +H FV+K + V AL +Y + D++ A+++F + EK
Sbjct: 327 GHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEK--------- 377
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+ME SW+A+I +A NG E A+ LF+ MQ
Sbjct: 378 -------------------------TME-----SWNAMISGYAQNGLTEMAVALFQLMQE 407
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
V N +TIS LS CA AL++G+ +H + + + N+ V L++MY KCG + E
Sbjct: 408 LNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAE 467
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
+F++++ K++++WN+MISGYG++G G AL +++M++A P F++V+ ACSH
Sbjct: 468 ARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSH 527
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP-NAYVW 584
GLV+EG+++F +M E+RI P +EH CMVDLLGRAG L EA +++ P VW
Sbjct: 528 GGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVW 587
Query: 585 GTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTK 644
G LL +C +HKN+D+A+ + ++F L +E G Y+LLSN+Y + + +AA VR AKT+
Sbjct: 588 GALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTR 647
Query: 645 GLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
L K G + IE+ + H+F +G+ L + + LE L +M G P + L+++
Sbjct: 648 KLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDV 707
>gi|347954504|gb|AEP33752.1| chloroplast biogenesis 19, partial [Lobularia maritima]
Length = 496
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 178/463 (38%), Positives = 274/463 (59%), Gaps = 12/463 (2%)
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA--DHMGKVIH 295
++WTS ++ +R GRL E F MR G+E +LS C D ++ + G ++H
Sbjct: 33 ISWTSRITLLSRNGRLAEAAKEFSDMRFAGVEPNHITFIALLSGCGDFSSGSESFGDLLH 92
Query: 296 GFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
G+ K G + ++V V A+I +Y KHG V A+ +F +E KN ++WN +I Y G
Sbjct: 93 GYACKLGLDRNHVMVGTAIIGMYSKHGRVSKARLVFDHMEGKNSMTWNTMIDGYMRKGKI 152
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
D+A ++F + M +ISW+A+I F G EEAL FR+MQ + V + V
Sbjct: 153 DDAYKLFDE--------MPERGLISWTAMINGFVKKGFHEEALVWFREMQSSGVEPDYVA 204
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
I +L+ C AL+ G +H ++V N+ V N ++++ +CGC+E VF+ +E
Sbjct: 205 IIAVLAACTNLGALSFGLWVHRYLVSRDFRNNVRVNNSSIDLHCRCGCVELAQPVFDHME 264
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
K+ +++WNS+I + NG + +L F M E GFKP+ V F L+ACSH GLV EG R
Sbjct: 265 KRTVVSWNSVIVVFSANGHADESLVYFRRMQEEGFKPNAVTFTGALTACSHVGLVEEGLR 324
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F M +E+RI P++EHY C+VDL RAG L++A ++V++MPM+PN V G+LL +CR H
Sbjct: 325 YFQTMKKEYRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVIGSLLAACRTH 384
Query: 595 -KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
NT +AE + + ++ +Y++LSN+YAA G+WE A+K+R K GLKK G S
Sbjct: 385 GNNTVLAERLMKHLSDTNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 444
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
IE+ H+F +G+S + + EVLE L+ M+++GCV +
Sbjct: 445 SIEIDDCTHVFMAGDSAHVETGYIREVLEILSSDMQSQGCVDE 487
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 170/327 (51%), Gaps = 13/327 (3%)
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF-RFS 153
S+++ W S + + NG A K + MR GV + TF ++ C G F S
Sbjct: 30 STTISWTSRITLLSRNGRLAEAAKEFSDMRFAGVEPNHITFIALLSGC---GDFSSGSES 86
Query: 154 FGQIVHNHVLQMGFQGN-VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
FG ++H + ++G N V + +IGMY+K G++S + +FD + KN ++WN M G+
Sbjct: 87 FGDLLHGYACKLGLDRNHVMVGTAIIGMYSKHGRVSKARLVFDHMEGKNSMTWNTMIDGY 146
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
D A +LF M GL ++WT++++ + G EE + F M+ G+E
Sbjct: 147 MRKGKIDDAYKLFDEMPERGL----ISWTAMINGFVKKGFHEEALVWFREMQSSGVEPDY 202
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
AI VL+ C +L A G +H +++ F + V V N+ I ++ + G V++AQ +F
Sbjct: 203 VAIIAVLAACTNLGALSFGLWVHRYLVSRDFRNNVRVNNSSIDLHCRCGCVELAQPVFDH 262
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+E++ +VSWN++I ++ G DE++ F ++++ +PN ++++ + A + G
Sbjct: 263 MEKRTVVSWNSVIVVFSANGHADESLVYFRRMQE----EGFKPNAVTFTGALTACSHVGL 318
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLL 419
EE L F+ M+ ++ + G L
Sbjct: 319 VEEGLRYFQTMKKEYRISPRIEHYGCL 345
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 101/193 (52%), Gaps = 7/193 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y R G++ DA +F+ P + + W +++ V G +E AL + +M+ GV D
Sbjct: 146 YMRKGKIDDAYKLFDEMP---ERGLISWTAMINGFVKKGFHEEALVWFREMQSSGVEPDY 202
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
V+ AC +G+ SFG VH +++ F+ NV + N I ++ + G + +
Sbjct: 203 VAIIAVLAACTNLGAL----SFGLWVHRYLVSRDFRNNVRVNNSSIDLHCRCGCVELAQP 258
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+FD + + +SWN + F+ N D +L F+RM+ EG +PN VT+T L++ + G
Sbjct: 259 VFDHMEKRTVVSWNSVIVVFSANGHADESLVYFRRMQEEGFKPNAVTFTGALTACSHVGL 318
Query: 253 LEETMDLFDMMRK 265
+EE + F M+K
Sbjct: 319 VEEGLRYFQTMKK 331
>gi|242089043|ref|XP_002440354.1| hypothetical protein SORBIDRAFT_09g030130 [Sorghum bicolor]
gi|241945639|gb|EES18784.1| hypothetical protein SORBIDRAFT_09g030130 [Sorghum bicolor]
Length = 866
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 208/707 (29%), Positives = 353/707 (49%), Gaps = 48/707 (6%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP--------FDCKSSSLL 99
Q+H+ + G +A + + R GR AR + E A D + S+L
Sbjct: 91 PQLHSLAVRAGHARDPRVACALADLLVRLGRGASARRLLEEATAVEEEGEDGDEEEDSVL 150
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN + + + +A+ + +MR GV DG+ + AC G+ R GQ VH
Sbjct: 151 WNKRVAMLAEAEEWGDAIAAFGEMRARGVAPDGYACARALHACGRAGAPR----EGQAVH 206
Query: 160 NHVLQMGFQGNVHIVNE-LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
H + G +V L GMYA+ + + ++ + ++WN++ + A
Sbjct: 207 AHAAKAGHVAAHPLVPGFLAGMYAESADVGAARRVLETEDAPP-VAWNVVVACCARLGLV 265
Query: 219 DGALELFKRMELEG---LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
D AL+L +RM G LEP+ TW ++LS AR GR E + +M +G++ + ++
Sbjct: 266 DDALDLAERMARSGRLELEPSLATWNAVLSGCARNGRDREAFGVVRIMLDQGLQPDSSSM 325
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
+ +L A L G HGF ++ E V+ A + +Y K G ++ AQ +F +E
Sbjct: 326 SSLLKSVASLGLLAHGMEAHGFFLRNQLEPDVYTGTAFVDMYAKCGHLEYAQKVFDTLEL 385
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEK------------------LDGGSME---- 373
+NI +WN+L+ YA AG D A+++ ++++ ++G S +
Sbjct: 386 RNITTWNSLVAGYANAGQFDHALDLVEEMKRNRLDPDVTTWNGLINGYSVNGKSSQAVLL 445
Query: 374 ---------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
PNV+SW+++I +NG E++ F +MQ V + VT+S LL CA
Sbjct: 446 LRQIKAIGLTPNVVSWTSLISGSCNNGDYEDSFYFFNEMQKDHVQPSVVTMSVLLRACAG 505
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
A L G+E+H +R + +++++V L++MY K G L +FE+I++ +L++ N+M
Sbjct: 506 LALLKKGKELHCFALRRAYDRDMVVGTALIDMYSKSGNLASAQRIFERIQENNLVSSNAM 565
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
++G +G G A+A F +M +G KPD + F A+L+AC LV EG FD M +
Sbjct: 566 LTGLAAHGQGHEAIALFHDMCNSGLKPDSITFTALLTACRSMDLVTEGWEYFDTMESRYG 625
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
+ P +E+YACMVDLL R G L EA D + P + + +WG LL C +H N +AEA A
Sbjct: 626 VTPTVENYACMVDLLARCGYLDEAMDFINKSPFKSVSSLWGALLTGCTLHGNLALAEAAA 685
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
++F L + +Y+ + ++Y +++A ++ + K + L G SWI++++ IH+F
Sbjct: 686 RKLFKLEPYNSANYLQMVSLYEHEQMFDEAESLKYAMKARALDTRPGWSWIQIEQSIHVF 745
Query: 665 SSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVK 711
D + E L L Q+ G VPD I++ + ++ K
Sbjct: 746 EVEGKPHPDTAEIYEELIRLVFQIRKSGYVPDTSCIVYNVPEEEKEK 792
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 95/266 (35%), Gaps = 72/266 (27%)
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE-----------SAALNIGRE 433
G+ A RG +D FR +L + LL CAE SAA + +
Sbjct: 45 GSLAEALRG---VDSFRDGRL---------LVSLLRQCAELLHGDEDTERISAARRVAPQ 92
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCG-------CLEEGHLVFEQIEKKDL----ITWN 482
+H VR ++ V L ++ ++ G LEE V E+ E D + WN
Sbjct: 93 LHSLAVRAGHARDPRVACALADLLVRLGRGASARRLLEEATAVEEEGEDGDEEEDSVLWN 152
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR- 541
++ +A+A F EM G PDG A L AC AG EG+ + +
Sbjct: 153 KRVAMLAEAEEWGDAIAAFGEMRARGVAPDGYACARALHACGRAGAPREGQAVHAHAAKA 212
Query: 542 ------------------------------EFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
E P + + +V R GL+ +A D+
Sbjct: 213 GHVAAHPLVPGFLAGMYAESADVGAARRVLETEDAPPVA-WNVVVACCARLGLVDDALDL 271
Query: 572 VKNMP------MEPNAYVWGTLLNSC 591
+ M +EP+ W +L+ C
Sbjct: 272 AERMARSGRLELEPSLATWNAVLSGC 297
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 104/238 (43%), Gaps = 20/238 (8%)
Query: 37 LLQQCKTIH--QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCK 94
LL++ K +H L++ +++ +V G ++ +Y++ G L A+ +FE +
Sbjct: 508 LLKKGKELHCFALRRAYDRDMVVGTA--------LIDMYSKSGNLASAQRIFERIQENNL 559
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
SS N++L ++G A+ L+ M G+ D TF ++ AC+ M + +
Sbjct: 560 VSS---NAMLTGLAAHGQGHEAIALFHDMCNSGLKPDSITFTALLTACRSMDLVTEGWEY 616
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMMFSGFA 213
+ + + G V ++ + A+ G + ++ +K K+ S W + +G
Sbjct: 617 FDTMES---RYGVTPTVENYACMVDLLARCGYLDEAMDFINKSPFKSVSSLWGALLTGCT 673
Query: 214 LNFDCDGALELFKRMELEGLEP-NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
L+ + AL +L LEP N + ++S + +E L M+ R ++
Sbjct: 674 LHGNL--ALAEAAARKLFKLEPYNSANYLQMVSLYEHEQMFDEAESLKYAMKARALDT 729
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 208/729 (28%), Positives = 354/729 (48%), Gaps = 117/729 (16%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C L ++VH +VTG + F+A ++ +YA+ G L D+R +F
Sbjct: 85 FPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGI- 143
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + WN++ V + L A+ L+ +M + G++ + F+ +++ AC +
Sbjct: 144 --VERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQ---- 197
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H +L+MG + N L+ MY+K G++ + +F + + +SWN + +
Sbjct: 198 EGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIA 257
Query: 211 GFALNFDC-DGALELFKRMELEGLEPNFVTWTSLLSS----------------------- 246
G L+ DC D AL L M+ G PN T +S L +
Sbjct: 258 GCVLH-DCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAH 316
Query: 247 ------------HARCGRLEETMDLFDMMRKR---------------------------- 266
+++C +++ +D M K+
Sbjct: 317 SDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKM 376
Query: 267 ---GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
I+ ++ VL A L A + K IH IK G +V N+L+ YGK +
Sbjct: 377 FSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHI 436
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
A +F E +++V++ ++IT+Y++ G +EA++++ Q
Sbjct: 437 DEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQ-------------------- 476
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
MQ A + + S LL+ CA +A G+++H H ++
Sbjct: 477 -------------------MQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGF 517
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
+I N L+NMY KCG +E+ F +I + +++W++MI GY +G G+ AL F +
Sbjct: 518 MCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQ 577
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M+ G P+ + V+VL AC+HAGLVNEG++ F+ M F I+P EHYACM+DLLGR+G
Sbjct: 578 MLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSG 637
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
L EA ++V ++P E + +VWG LL + R+HKN ++ + A +F L E +G+++LL+N
Sbjct: 638 KLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLAN 697
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
IYA++G WE+ AKVR K +KK G SWIE+K K++ F G+ S + L++
Sbjct: 698 IYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQ 757
Query: 684 LALQMENKG 692
L + G
Sbjct: 758 LGDLLSKAG 766
Score = 198 bits (504), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 158/639 (24%), Positives = 279/639 (43%), Gaps = 129/639 (20%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN-VFETAPFDCKSSSLLWNSILRVN 107
++H LI G + L ++++Y++ R AR V E++ D S W+S+L
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVS----WSSLLSGY 57
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
V NG E AL ++ +M LGV + FTFP V++AC S + + G+ VH + GF
Sbjct: 58 VQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKAC----SMKRDLNMGRKVHGMAVVTGF 113
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ + + N L+ MYAK G + DS +LF + +N +SWN +FS + + C A+ LFK
Sbjct: 114 ESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKE 173
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M G+ PN + I+++L+ CA L
Sbjct: 174 MVRSGIMPNEFS-----------------------------------ISIILNACAGLQE 198
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+G+ IHG ++K G + F NAL+ +Y K G+++ A +F +I ++VSWNA+I
Sbjct: 199 GDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAG 258
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
D A+ + +++ GS RPN+
Sbjct: 259 CVLHDCNDLALMLLDEMK----GSGTRPNMF----------------------------- 285
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
T+S L CA +GR++H ++++ + ++ GL++MY KC +++
Sbjct: 286 ------TLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDAR 339
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM----------------------- 504
++ + KKD+I WN++ISGY G +A++ F +M
Sbjct: 340 RAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQ 399
Query: 505 ------------IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
I++G D ++L ++E +IF E R + Y
Sbjct: 400 AIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIF-----EERTWEDLVAY 454
Query: 553 ACMVDLLGRAGLLQEASDI---VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI-- 607
M+ + G +EA + +++ ++P+ ++ +LLN+C + + +
Sbjct: 455 TSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIK 514
Query: 608 FGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
FG + + S L+ N+YA G EDA + +G+
Sbjct: 515 FGFMCDIFASNSLV-NMYAKCGSIEDADRAFSEIPNRGI 552
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 177/364 (48%), Gaps = 27/364 (7%)
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
N L+T Y++ A ++ + +LD V+SWS+++ + NG EEAL +F
Sbjct: 20 NHLVTLYSKCRRFGYARKLVDESSELD--------VVSWSSLLSGYVQNGFVEEALLVFN 71
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+M L V N T +L C+ LN+GR++HG V + V N L+ MY KCG
Sbjct: 72 EMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCG 131
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
L++ +F I ++++++WN++ S Y + L A+ F+EM+ +G P+ + +L+
Sbjct: 132 LLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILN 191
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
AC+ + GR+I +M++ Q A +VD+ +AG ++ A + +++ P+
Sbjct: 192 ACAGLQEGDLGRKIHGLMLKMGLDLDQFSANA-LVDMYSKAGEIEGAVAVFQDIA-HPDV 249
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISA 641
W ++ C +H D+A + ++ G T N++ S A K +
Sbjct: 250 VSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRP--------NMFTLSS----ALKACAAM 297
Query: 642 KTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
K L + S I++ +F++ + D+ + CE++++ ++ +P DII
Sbjct: 298 GFKELGRQLHSSLIKMDAHSDLFAAVGLV--DMYSKCEMMDDARRAYDS---MPKKDIIA 352
Query: 702 WEMM 705
W +
Sbjct: 353 WNAL 356
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 155/343 (45%), Gaps = 18/343 (5%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
I +N + L + + I KQ+H I +G + ++ +L Y + + +A
Sbjct: 381 IDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEAS 440
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
+FE ++ + + S++ G E ALKLY++M+ + D F ++ AC
Sbjct: 441 KIFEERTWE---DLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACA 497
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
+ ++ G+ +H H ++ GF ++ N L+ MYAK G + D+ + F ++ + +
Sbjct: 498 NLSAYE----QGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIV 553
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
SW+ M G+A + AL LF +M +G+ PN +T S+L + G + E F+ M
Sbjct: 554 SWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKM 613
Query: 264 RKR-GIEVGAEAIAVVLSVCADLAADHMGKVIHG--FVIKGGFEDYVFVKNALICVYGKH 320
GI+ E A ++ + GK+ V FE FV AL+ H
Sbjct: 614 EVMFGIKPTQEHYACMIDLLG-----RSGKLNEAVELVNSIPFEADGFVWGALLGAARIH 668
Query: 321 GDVKVAQ---NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
++++ Q + ++E + + L YA AG+ + +V
Sbjct: 669 KNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKV 711
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 195/658 (29%), Positives = 336/658 (51%), Gaps = 55/658 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIY-ARFGRLFD-----ARNVFETAP 90
LLQQC++I L Q+H L+ G +A A + ++++ Y A GR D AR +F+ P
Sbjct: 9 LLQQCRSIRHLDQLHAHLLAHGPSAVASVVPQLVASYCALSGRAGDVALCHARRMFDRVP 68
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+NS++R ++G + AL L+ + + G+L + FT P V++AC +
Sbjct: 69 ---DPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSRARAAEH 125
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+ H +++G+ V + N L+ A G + DS +LF ++
Sbjct: 126 ALA----THGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHR--------- 172
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
N V+W +++ A+ G E LF MR++G+
Sbjct: 173 -------------------------NVVSWNTMIGGCAQAGETSEACALFREMRRQGVLA 207
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+L VC+ +G+++H ++ G + + NAL+ +YGK GD+ +A F
Sbjct: 208 DVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCF 267
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+ KN+VSW +++ + A+ G D A + F Q M N+ISW+A+I +
Sbjct: 268 DVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQ--------MPERNIISWNAMISCYVQG 319
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
GR E L L+ +M+ + + VT++G+LSV ++ L GR IH ++ + + V
Sbjct: 320 GRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVL 379
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
N L++MY +CG ++ +F ++ K+ I+WN +I M+G + A+ F M+ F
Sbjct: 380 NSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQEAVMFFRAMVSDAFS 439
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
PD + FV +LSACSH GL+ +G+ F M + ++P++EHYACMVDLLGR G L +A D
Sbjct: 440 PDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLLGRHGHLAKAVD 499
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
++K+MPM+P+ VWG L+ +CR+H + ++ + Q+ L G ++L+SN+ + +
Sbjct: 500 LIKDMPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELEGINGGLFVLISNLLYETRQ 559
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
WED ++R + +G KK G S IE+ IH F + + +++LA +
Sbjct: 560 WEDMKRLRKLMRDRGTKKDMGVSSIEINNSIHEFGVEDIRHESSSQIYAAVDQLAYHL 617
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 179/461 (38%), Positives = 273/461 (59%), Gaps = 12/461 (2%)
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL--AADHMGKVIH 295
V+WTS ++ R GRL E F MR G+E +LS C D ++ + ++H
Sbjct: 28 VSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPSGSETLSNLLH 87
Query: 296 GFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
G+ K G + +V V A+I +Y K G VK A+ +F +E+ N V+WN +I Y +G
Sbjct: 88 GYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMIDGYMRSGQV 147
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
D AV++F ++ + D +ISW+A+I F G EEAL FR+MQ++ V + V
Sbjct: 148 DNAVKMFDKMPERD--------LISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVA 199
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
I L+ C AL+ G +H +V+ N+ V N L+++Y +CGC+E VF+++E
Sbjct: 200 IIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKME 259
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
K+ +++WNS+I G+ NG +L F +M E GFKPD V F L+ACSH GLV EG R
Sbjct: 260 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLR 319
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F M R++ I P++EHY C+VDL RAG L++A ++++MPM+PN V G+LL +CR H
Sbjct: 320 YFQTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMKPNEVVIGSLLAACRTH 379
Query: 595 -KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
NT +AE + + L ++ +Y++LSN+YAA G+WE A+++R K GLKK G S
Sbjct: 380 GNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQPGFS 439
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
IE+ H+F +G+S + + EVLE ++ + +GCV
Sbjct: 440 SIEIDDCTHVFMAGDSAHVETAIIREVLELVSSDLRLQGCV 480
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 161/310 (51%), Gaps = 11/310 (3%)
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+++ W S + + NG A K + MR GV + TF ++ C S S
Sbjct: 26 TTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPSGSETLS-- 83
Query: 156 QIVHNHVLQMGF-QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
++H + ++G + +V + +IGMY+K G + + +FD + N ++WN M G+
Sbjct: 84 NLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMIDGYMR 143
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
+ D A+++F +M E + ++WT++++ + G EE + F M+ G+ A
Sbjct: 144 SGQVDNAVKMFDKMP----ERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVA 199
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
I L+ C +L A G +H +V+ F++ V V N+LI +Y + G V+ A+ +F ++E
Sbjct: 200 IIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKME 259
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
++ +VSWN++I +A G E++ F ++++ +P+ ++++ + A + G E
Sbjct: 260 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQE----EGFKPDAVTFTGALTACSHVGLVE 315
Query: 395 EALDLFRKMQ 404
E L F+ M+
Sbjct: 316 EGLRYFQTMK 325
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 104/193 (53%), Gaps = 7/193 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y R G++ +A +F+ P + + W +++ V G +E AL + +M+ GV D
Sbjct: 141 YMRSGQVDNAVKMFDKMP---ERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDY 197
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
+ AC +G+ SFG VH +V+ F+ NV + N LI +Y + G + + +
Sbjct: 198 VAIIAALNACTNLGAL----SFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFARE 253
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+FDK+ + +SWN + GFA N + +L F++M+ EG +P+ VT+T L++ + G
Sbjct: 254 VFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGL 313
Query: 253 LEETMDLFDMMRK 265
+EE + F M++
Sbjct: 314 VEEGLRYFQTMKR 326
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 209/651 (32%), Positives = 342/651 (52%), Gaps = 56/651 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPF-DCKS 95
LL I+QLKQ+ +I+ + + R+L+ A F + AR VF+ P D
Sbjct: 8 LLHCSLPINQLKQIQALIIIKYLSLTPLFIRRLLN--ASFIQY--ARQVFDQIPHPDQGV 63
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ R++++N AL+ +V M + V FT P + ++C + G
Sbjct: 64 HCSFITAYSRLSLNN----EALRTFVSMHQNNVRIVCFTIPPIFKSCASL----LAIDVG 115
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ VH+ V++ GF +V N LI YAK+ + + +FD + VK+ I++N + S ++ +
Sbjct: 116 KQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRS 175
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
+ A ELF +M + + V+W +++S +A+ G + +F M+ E +
Sbjct: 176 GEVLAARELFDKMR----DRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITL 231
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
A VLS+CA L MG I K D K NL S
Sbjct: 232 ATVLSICAKLGDLEMGLRIK-----------------------KLNDNK---NLGS---- 261
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
N++ A++ Y + G D+ VF M R +V++WSA+I +A NGR E
Sbjct: 262 -NMIVSTAMLEMYVKCGAVDDGRLVFDH--------MARRDVVTWSAMIAGYAQNGRSNE 312
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
AL+LF M+ A++ N VT+ +LS CA+ ++ G I +V + N+ V + LL
Sbjct: 313 ALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLG 372
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY KCG + + +F+++ ++D +TWNSMI G +NG E+A+A + M E KP+ +
Sbjct: 373 MYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNIT 432
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
FV +++AC+HAG V G F M + I P +EH+AC+VDL R+G L +A + + M
Sbjct: 433 FVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRM 492
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
+EPN +WGTLL++ R+H N ++AE ++ L + +G+Y++LSNIYA++GRW++A
Sbjct: 493 EVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEAL 552
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELAL 686
KVR K K ++K A SW+EV+ ++H F G++ V ++ LAL
Sbjct: 553 KVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSHPRSDEVYSTIDGLAL 603
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 208/670 (31%), Positives = 348/670 (51%), Gaps = 59/670 (8%)
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
G+L AR VF+ P + +N+++R G + A+ LY M + V + +TFP
Sbjct: 48 GQLALARQVFDRIP---APDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFP 104
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
V++AC + R G+ +H H G ++ + LI +Y + + + +F K
Sbjct: 105 FVLKACSALVDLR----AGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160
Query: 197 VRVKNYISWNMMFSGFALNFDCDGAL-ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
+ +++ ++WN M +G+A + A+ L + GL PN T SLL A+ G L +
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220
Query: 256 TMDLFDMMRKRGIEVGAEAIAV------VLSVCADLAADHMGKVIHGFVIK--------- 300
+ + +E E + + + + C L + +V HG ++
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLV--YACRVFHGMPVRNDVTWSALI 278
Query: 301 GGF-------EDYVFVKNALI---C------------VYGKHGDVKVAQNLFSEIEEKNI 338
GGF E + K+ L+ C V D+ + L + I + I
Sbjct: 279 GGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGI 338
Query: 339 ----VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
+ N+L++ YA+AGL +EA F ++ D IS+ A++ NG+ E
Sbjct: 339 HADLTASNSLLSMYAKAGLINEATMFFDEIAVKD--------TISYGALLSGCVQNGKAE 390
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
EA +F+KMQ + + T+ L+ C+ AAL G+ HG V+ + + N L+
Sbjct: 391 EAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLI 450
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCG ++ VF+++ +D+++WN+MI+GYG++GLG+ A F M GF PD V
Sbjct: 451 DMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDV 510
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F+ +++ACSH+GLV EG+ FD M ++ I P+MEHY CMVDLL R GLL EA +++
Sbjct: 511 TFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQS 570
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP++ + VWG LL +CR+HKN D+ + ++ I L E TG+++LLSNI++A+GR+++A
Sbjct: 571 MPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEA 630
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
A+VRI K KG KK G SWIE+ +H F G+ +++ L+ + + ++ G
Sbjct: 631 AEVRIIQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQ 690
Query: 695 PDNDIILWEM 704
D +L ++
Sbjct: 691 ADTSFVLQDL 700
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 120/258 (46%), Gaps = 12/258 (4%)
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
E K+ W + + G A +VF ++ P+ +++A+I A++ G
Sbjct: 30 EVKDKKQWQQELEQHISRGQLALARQVFDRIPA--------PDARAYNALIRAYSWLGPF 81
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
A+DL+R M +V N T +L C+ L GR IH H ++ ++ V L
Sbjct: 82 HAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTAL 141
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE-AGFKPD 512
+++Y++C VF ++ +D++ WN+M++GY +G+ +A+A +M + G +P+
Sbjct: 142 IDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPN 201
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREF--RIEPQMEHYACMVDLLGRAGLLQEASD 570
V++L + G + +G I +R + E Q+ ++D+ + L A
Sbjct: 202 ASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACR 261
Query: 571 IVKNMPMEPNAYVWGTLL 588
+ MP+ N W L+
Sbjct: 262 VFHGMPVR-NDVTWSALI 278
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/675 (28%), Positives = 357/675 (52%), Gaps = 84/675 (12%)
Query: 62 SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL-WNSILRVNVSNGLYENALKLY 120
+ F+ +++S+YA+ G L +AR VF + + +L W++++ ++ ++ +
Sbjct: 118 NPFVETKLVSMYAKCGSLGEARKVFG----EMRERNLYAWSAMIGAYSREQMWREVVQHF 173
Query: 121 VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
M + G++ D F P +++AC G G+++H+ V++ G N+ + N ++ +
Sbjct: 174 FFMMEDGIVPDEFLLPKILQACGNCGDAET----GKLIHSLVIRCGMNFNIRVSNSILAV 229
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
YAK G++S + + F+ + ++ +SWN + +G+ + + + +LF++M+ EG+EP VTW
Sbjct: 230 YAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTW 289
Query: 241 TSLLSSHARCGRLEETMDLFDMMRK----------------------------------- 265
L++S+++ G+ ++ M+L M
Sbjct: 290 NILINSYSQSGKCDDAMELMKKMESFRIVPDVFTWTSMISGFAQNNRRSQALELFREMLL 349
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
GIE + +S CA L A G +H +K G + + V N+LI +Y K G+++
Sbjct: 350 AGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELED 409
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A+ +F I +K++ +WN++I Y +AG C +A ++F ++ + D PNV++W+A+I
Sbjct: 410 ARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESD----VPPNVVTWNAMIS 465
Query: 386 AFASNGRGEEALDLF------------------------------------RKMQLAKVV 409
+ NG ++A+DLF R+MQ +
Sbjct: 466 GYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIR 525
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
NSVT+ +L CA A +EIHG ++R ++ + V N L++ Y K G + +
Sbjct: 526 PNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTI 585
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F+ I KD+I+WNS+I+GY ++G ++AL F++M + G KP F++++ A S +G+V
Sbjct: 586 FQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMV 645
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
++G+++F M+ +++I P +EH++ M+DLLGR+G L EA + +++M +EP++ +W LL
Sbjct: 646 DKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAALLT 705
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
+ ++H N +A + L + + +YA SG++ED +K+R S K K+
Sbjct: 706 ASKIHGNIGLAIRAGECLLELEPSNFSIHQQILQMYALSGKFEDVSKLRKSEKRSETKQP 765
Query: 650 AGQSWIEVKRKIHMF 664
G SWIE K +H F
Sbjct: 766 LGCSWIEAKNIVHTF 780
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 176/394 (44%), Gaps = 51/394 (12%)
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY-VFV 309
GRL + + D + + G V +L C D + +G+ +H + G E+ FV
Sbjct: 64 GRLADAIACLDAIAQGGSNVKPNTYMQLLQSCIDQGSAELGRKLHARI--GLLEEMNPFV 121
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
+ L+ +Y K G + A+ +F E+ E+N+ +W+A+I +Y+ + E V+ F
Sbjct: 122 ETKLVSMYAKCGSLGEARKVFGEMRERNLYAWSAMIGAYSREQMWREVVQHF-------- 173
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
F M+ +V + + +L C
Sbjct: 174 ------------------------------FFMMEDG-IVPDEFLLPKILQACGNCGDAE 202
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
G+ IH V+R MN NI V N +L +Y KCG L FE ++ +D ++WNS+I+GY
Sbjct: 203 TGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYC 262
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
G E + FE+M E G +P V + ++++ S +G ++ + M FRI P +
Sbjct: 263 QKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKM-ESFRIVPDV 321
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNM---PMEPNAYVWGTLLNSC---RMHKNTDVAEAM 603
+ M+ + +A ++ + M +EPN + +++C + K ++
Sbjct: 322 FTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSV 381
Query: 604 ASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
A +I + G+ ++ ++Y+ SG EDA +V
Sbjct: 382 AVKIGCVEDLLVGNSLI--DMYSKSGELEDARRV 413
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 22/273 (8%)
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
+P V A + NGR +A+ + T LL C + + +GR+
Sbjct: 49 KPKVTD--AHLNHLCKNGRLADAIACLDAIAQGGSNVKPNTYMQLLQSCIDQGSAELGRK 106
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+H + + N V+ L++MY KCG L E VF ++ +++L W++MI Y +
Sbjct: 107 LHARIGLLE-EMNPFVETKLVSMYAKCGSLGEARKVFGEMRERNLYAWSAMIGAYSREQM 165
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR---EFRIEPQME 550
+ F M+E G PD +L AC + G G+ I +++R F I
Sbjct: 166 WREVVQHFFFMMEDGIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNS 225
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS-CR---MHKNTDVAEAMASQ 606
++ + + G L A +NM + W +++ C+ + K+ + E M +
Sbjct: 226 ----ILAVYAKCGRLSCARRFFENMDYR-DRVSWNSIITGYCQKGELEKSHQLFEKMQEE 280
Query: 607 IF--GLITETTGSYMLLSNIYAASGRWEDAAKV 637
GL+T + +L N Y+ SG+ +DA ++
Sbjct: 281 GIEPGLVT-----WNILINSYSQSGKCDDAMEL 308
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 103/217 (47%), Gaps = 12/217 (5%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
++K++H ++ + +A ++ YA+ G + A+ +F+ + WNS++
Sbjct: 546 KVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQGI---SSKDIISWNSLIA 602
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRFSFGQIVHNHVLQ 164
V +G ++AL L+ +M K+GV TF +I A G + + F ++ ++ +
Sbjct: 603 GYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMMEDYQIL 662
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALE 223
G + + + +I + + G++ ++ + + + ++ + W + + ++ + A+
Sbjct: 663 PGLEHH----SAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAALLTASKIHGNIGLAIR 718
Query: 224 LFKRMELEGLEP-NFVTWTSLLSSHARCGRLEETMDL 259
+ + LE LEP NF +L +A G+ E+ L
Sbjct: 719 AGECL-LE-LEPSNFSIHQQILQMYALSGKFEDVSKL 753
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 198/612 (32%), Positives = 326/612 (53%), Gaps = 19/612 (3%)
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
G + DA ++E P S + +++ V N L+++A ++ KM V + T
Sbjct: 194 GSVRDAVELYERCPLH---SVAFFTAMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLI 250
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
VI+AC +G+ F + G +V V F+ ++ + N LI +Y +MG + + ++FD
Sbjct: 251 CVIKAC--VGAGEFDLAMG-VVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDD 307
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
+ V++ +SW + +A D DGA + M N V+W +L++ H + G E
Sbjct: 308 MEVRDVVSWTALLDVYADLGDLDGARRVLDAMPAR----NEVSWGTLIARHEQKGDTAEA 363
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
+ L+ M G + VLS CA L G IH +K G +FV ++LI +
Sbjct: 364 LKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDM 423
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
Y K AQ +F+ + EKN V WN+LI+ Y+ G EA +F++ M N
Sbjct: 424 YCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNK--------MPARN 475
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
+SW+ +I +A N R +AL+ F M + + +T+S +L CA +L +GR +H
Sbjct: 476 SVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHA 535
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
+V++ + NI + L +MY K G L+ VF Q+ +K+ ITW +M+ G NG E
Sbjct: 536 EIVKLGIEDNIFMGTALCDMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEE 595
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
+++ FE+MIE G P+ F+A+L ACSH GLV + F+ M + I P+ +HY CMV
Sbjct: 596 SISLFEDMIENGIAPNEHTFLAILFACSHCGLVEQAIHYFETM-QAHGIPPKSKHYTCMV 654
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
D+L RAG L EA +++ + E + W +LL++C ++N ++ E A ++ L + T
Sbjct: 655 DVLARAGCLPEAEELLMKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTA 714
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKN 676
Y+LLSN+YA+ G+W+DAA+ RI + LKK AG SW++++ + H F S
Sbjct: 715 GYVLLSNMYASCGKWKDAAETRILMQGASLKKDAGCSWLQLRGQYHAFFSWKEKHPLSLE 774
Query: 677 VCEVLEELALQM 688
+ E+L+ L L++
Sbjct: 775 IYEILDLLMLEL 786
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 189/445 (42%), Gaps = 46/445 (10%)
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN 236
++ + K G ++ + +LF + K+ +S+ M A+EL++R L +
Sbjct: 155 MVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSV--- 211
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
+T+++S R ++ +F M + + V+ C + + G
Sbjct: 212 -AFFTAMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVG 270
Query: 297 FVIKGG-FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
+K FE + V N+LI +Y + GD A+ +F ++E +++VSW AL+ YA+ G D
Sbjct: 271 LAVKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGDLD 330
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
A V +M N +SW +I G EAL L+ +M N
Sbjct: 331 GARRVLD--------AMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCF 382
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
S +LS CA L G IH + +++ + N+ V + L++MY KC VF + +
Sbjct: 383 SSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPE 442
Query: 476 KDLITWNSMISGYGMN--------------------------GLGEN-----ALATFEEM 504
K+ + WNS+ISGY N G EN AL F M
Sbjct: 443 KNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAM 502
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+ +G P + +VL AC++ + GR + +V+ IE + + D+ ++G
Sbjct: 503 LASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVK-LGIEDNIFMGTALCDMYAKSGD 561
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLN 589
L + + MP E N W ++
Sbjct: 562 LDSSRRVFYQMP-EKNNITWTAMVQ 585
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 171/393 (43%), Gaps = 48/393 (12%)
Query: 31 LDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
+ CF +L C T+ L+ ++H + G++ + F+++ ++ +Y + + A+ VF
Sbjct: 379 ISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFN 438
Query: 88 TAPFD---CKSS-------------------------SLLWNSILRVNVSNGLYENALKL 119
+ P C +S S+ WN+++ N + +AL
Sbjct: 439 SLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNY 498
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
+ M G + T V+ AC + S G++VH ++++G + N+ + L
Sbjct: 499 FYAMLASGHIPGEITLSSVLLACANLCSLE----MGRMVHAEIVKLGIEDNIFMGTALCD 554
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MYAK G + S ++F ++ KN I+W M G A N + ++ LF+ M G+ PN T
Sbjct: 555 MYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHT 614
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV-----CADLAADHMGKVI 294
+ ++L + + CG +E+ + F+ M+ GI ++ ++ V C A + + KV
Sbjct: 615 FLAILFACSHCGLVEQAIHYFETMQAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVS 674
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
+ + +A K + A+ L E+E+ N + L YA G
Sbjct: 675 SEL----DTSSWSSLLSACSTYRNKEIGERAAKKLH-ELEKDNTAGYVLLSNMYASCGKW 729
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+A E ++ G S+++ SW + G +
Sbjct: 730 KDAAETRILMQ---GASLKKDAGCSWLQLRGQY 759
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 138/314 (43%), Gaps = 42/314 (13%)
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
F + ++ + K GD+ A+ LF + EK++VS+ ++ + + G +AVE++ +
Sbjct: 150 FTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERC--- 206
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
+V ++A+I F N ++A +FRKM V N VT+ ++ C +
Sbjct: 207 -----PLHSVAFFTAMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVGAGE 261
Query: 428 LNIGREIHGHVVRVSM-NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
++ + G V+ ++ K+I V N L+ +Y++ G VF+ +E +D+++W +++
Sbjct: 262 FDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLD 321
Query: 487 GYG-------------------------------MNGLGENALATFEEMIEAGFKPDGVA 515
Y G AL + +M+ G +P+
Sbjct: 322 VYADLGDLDGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISC 381
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
F +VLSAC+ + G RI ++ + + ++D+ + A + ++
Sbjct: 382 FSSVLSACATLQDLRGGTRIHANALK-MGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSL 440
Query: 576 PMEPNAYVWGTLLN 589
P E N W +L++
Sbjct: 441 P-EKNTVCWNSLIS 453
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 51/260 (19%)
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
S ++ A+A+ R + FR +A A+S T ++S ++ + R + +
Sbjct: 119 SNLLTAYAAFARAGDRDQAFRDC-VAADAASSFTYDFMVSEHVKAGDIASARRLFYGMPE 177
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
K+++ +++ MK G + + ++E+ + + +MISG+ N L ++A
Sbjct: 178 ----KSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFTV 233
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVN------------------------------ 530
F +M+ +P+ V + V+ AC AG +
Sbjct: 234 FRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYL 293
Query: 531 ------EGRRIF-DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
RR+F DM VR+ + + ++D+ G L A ++ MP N
Sbjct: 294 RMGDAAAARRVFDDMEVRD------VVSWTALLDVYADLGDLDGARRVLDAMPAR-NEVS 346
Query: 584 WGTLLNSCRMHKNTDVAEAM 603
WGTL+ R + D AEA+
Sbjct: 347 WGTLI--ARHEQKGDTAEAL 364
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 202/666 (30%), Positives = 336/666 (50%), Gaps = 100/666 (15%)
Query: 35 DHLLQQCKTIHQL-------------KQVHNQLIVTGANASAFLAARVLSIYARFGRLFD 81
D+L C T+ L +Q+H+ +I G ++ + +L +Y +
Sbjct: 308 DYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKT 367
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYEN---ALKLYVKMRKLGVLGDGFTFPLV 138
A +F TA + + +LWN +L V+ G +N + +++ +M+ G++ + FT+P +
Sbjct: 368 AHEMFLTAQTE---NVVLWNVML---VAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSI 421
Query: 139 IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR 198
+R C +G+ G+ +H V++ GFQ NV++ + LI MYAK G++
Sbjct: 422 LRTCTSVGAL----DLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKL----------- 466
Query: 199 VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD 258
D A + + + E + V+WT+L+S +A+ E +
Sbjct: 467 --------------------DTAHVILRTLT----EDDVVSWTALISGYAQHNLFAEALK 502
Query: 259 LFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG 318
F M RGI+ + +S CA + A + G+ IH G+ + + + NAL+ +Y
Sbjct: 503 HFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYA 562
Query: 319 KHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
+ G +K E + + EK+D + I
Sbjct: 563 RCGRIK----------------------------------EAYLEFEKIDA-----KDSI 583
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHV 438
SW+ +I FA +G E+AL +F +M AK+ A+ T +S A A + G++IH +
Sbjct: 584 SWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMI 643
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
++ + +I V N L+ Y KCG +E+ F ++ +K+ ++WN+MI+GY +G G A+
Sbjct: 644 IKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAV 703
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
FE+M + G P+ V FV VLSACSH GLV +G F+ M +E + P+ HYAC+VDL
Sbjct: 704 NLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDL 763
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
+ RAG L A ++ MP+EP+A +W TLL++C +HKN +V E A + L E + +Y
Sbjct: 764 ISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATY 823
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
+LLSN+YA SG+W+ + R + +G+KK G+SWIEVK +H F G+ L +
Sbjct: 824 VLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIY 883
Query: 679 EVLEEL 684
E L EL
Sbjct: 884 EFLAEL 889
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/633 (22%), Positives = 283/633 (44%), Gaps = 110/633 (17%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
I++ + L C H + I +Q+H ++I G S ++ ++ +YA+ G + AR
Sbjct: 112 ISFASVLRACSGHRI----GIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISAR 167
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
VF+ C S+ W +++ NG E A+ L+ +M G+ + F V+ C
Sbjct: 168 KVFDNL---CTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCT 224
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
+ F G+ +H V + G ++ N L+ +Y+ R+ N++
Sbjct: 225 KIK----LFDVGEQLHALVFKYGSSLETYVCNALVTLYS---------------RMPNFV 265
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
S A ++F +M+ + V++ SL+S A+ G + ++LF M
Sbjct: 266 S----------------AEKVFSKMQ----SKDEVSFNSLISGLAQQGFSDGALELFTKM 305
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
++ ++ +A +LS CA A G+ +H +VIK G + V+ AL+ +Y D+
Sbjct: 306 KRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDI 365
Query: 324 KVAQN-------------------------------LFSEIEEKNIV----SWNALITSY 348
K A +F +++ K ++ ++ +++ +
Sbjct: 366 KTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTC 425
Query: 349 AEAG----------------------LCDEAVEVFSQLEKLDGG-----SMERPNVISWS 381
G +C ++++++ KLD ++ +V+SW+
Sbjct: 426 TSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWT 485
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
A+I +A + EAL F++M + ++++ S +S CA ALN GR+IH
Sbjct: 486 ALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVS 545
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
++++ + N L+++Y +CG ++E +L FE+I+ KD I+WN +ISG+ +G E+AL F
Sbjct: 546 GYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVF 605
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
+M A + F + +SA ++ + +G++I M+++ + +E ++ +
Sbjct: 606 AQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKR-GFDSDIEVSNALITFYAK 664
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
G +++A MP E N W ++ H
Sbjct: 665 CGSIEDARREFCEMP-EKNDVSWNAMITGYSQH 696
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 146/589 (24%), Positives = 261/589 (44%), Gaps = 112/589 (19%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
+ K++H +++ G + L +++ +Y G L VFE P S W+ I+
Sbjct: 28 ECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMP---NRSVRSWDKIIS 84
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
+ + L L+ M + V +F V+RAC R + + +H ++
Sbjct: 85 GFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRAC---SGHRIGIRYAEQIHARIICH 141
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
G + I N LIG+YAK G + + K+FD + K+ +SW M SGF+ N + A+ LF
Sbjct: 142 GLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLF 201
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
M G+ P ++S+LS C +++ LFD
Sbjct: 202 CEMHTAGIFPTPYVFSSVLSG---CTKIK----LFD------------------------ 230
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+G+ +H V K G +V NAL+ +Y + + A+ +FS+++ K+ VS+N+LI
Sbjct: 231 ----VGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLI 286
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG---RGEE------- 395
+ A+ G D A+E+F+++++ +P+ ++ ++++ A ASNG +GE+
Sbjct: 287 SGLAQQGFSDGALELFTKMKR----DYLKPDCVTVASLLSACASNGALCKGEQLHSYVIK 342
Query: 396 -------------------------ALDLFRKMQLAKVVANSV----------------- 413
A ++F Q VV +V
Sbjct: 343 AGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRI 402
Query: 414 ----TISGLLS----------VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
I GL+ C AL++G +IH V++ N+ V + L++MY K
Sbjct: 403 FRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAK 462
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
G L+ H++ + + D+++W ++ISGY + L AL F+EM+ G + D + F +
Sbjct: 463 HGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSA 522
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+SAC+ +N+GR+I E + +V L R G ++EA
Sbjct: 523 ISACAGIQALNQGRQIHAQSYVSGYSE-DLSIGNALVSLYARCGRIKEA 570
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 11/234 (4%)
Query: 350 EAGLCDEAVEVFSQLEKLDG-----GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
E+ LC++ V+V+ L LDG M +V SW +I F LDLF M
Sbjct: 44 ESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMI 103
Query: 405 LAKVVANSVTISGLLSVCA-ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
V ++ + +L C+ + +IH ++ + + ++ N L+ +Y K G +
Sbjct: 104 EENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLI 163
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
VF+ + KD ++W +MISG+ NG E A+ F EM AG P F +VLS C
Sbjct: 164 ISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGC 223
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYAC--MVDLLGRAGLLQEASDIVKNM 575
+ L + G ++ ++ F+ +E Y C +V L R A + M
Sbjct: 224 TKIKLFDVGEQLHALV---FKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKM 274
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 44/245 (17%)
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
M+ + AN T LL +C S +L +++HG ++++ ++ N L+++Y G
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
L+ VFE + + + +W+ +ISG+ + L F MIE P ++F +VL A
Sbjct: 61 LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120
Query: 523 CS------------HA------------------------GLVNEGRRIFDMMVREFRIE 546
CS HA GL+ R++FD + + +
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVS 180
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTLLNSCRMHKNTDVAEAM 603
+ M+ + G +EA + M P YV+ ++L+ C K DV E +
Sbjct: 181 -----WVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQL 235
Query: 604 ASQIF 608
+ +F
Sbjct: 236 HALVF 240
>gi|310656753|gb|ADP02188.1| PPR domain-containing protein [Triticum aestivum]
Length = 788
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 198/608 (32%), Positives = 317/608 (52%), Gaps = 19/608 (3%)
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
GR+ +A ++E P S + + + V N L+ NAL ++ KM V +G T
Sbjct: 194 GRVAEAVELYEQCP---SGSVAFFTATISGFVRNELHHNALGVFRKMLSCRVRPNGITIV 250
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
+I+AC G F S IV + F+ ++ + N LI +Y +MG + + K+FD+
Sbjct: 251 CMIKACVGAGEFGLALS---IVGLAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDE 307
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
+ VK+ +SW + ++ + D DGA + M E N V+W +L++ H + G E
Sbjct: 308 MDVKDVVSWTALLDVYSESGDLDGARRVLDAMP----ERNEVSWGTLIARHEQRGNAAEA 363
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
+ L+ M G + VLS CA L G IH +K G VFV +LI +
Sbjct: 364 VKLYSQMLADGCRPNISCFSSVLSACASLEDLRGGARIHARSLKMGSSTNVFVSCSLIDM 423
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
Y K AQ +F + +KNIV WN+L++ Y+ G EA+ +F + M N
Sbjct: 424 YCKCNKCGDAQTIFDTLPQKNIVCWNSLVSGYSYNGKMVEAMYLFKK--------MPARN 475
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
+ SW+ +I +A N + +AL F M + V +T S +L CA +L G+ H
Sbjct: 476 LASWNTIISGYAQNRQFVDALKSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHA 535
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
+++ + ++I + L +MY K G L+ +F Q+ +++ +TW +MI G NG E
Sbjct: 536 KTIKLGIEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGFAEE 595
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
++ FE+M+ G P+ F+A+L ACSH GLV + FD M + I P+ +HY CMV
Sbjct: 596 SILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFDKM-QALGISPKEKHYTCMV 654
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
D+L RAG L EA ++ P + A W LL++C ++N ++AE A ++ L + T
Sbjct: 655 DVLARAGRLAEAEALLMKTPSKSEANSWAALLSACNTYRNEEIAERAAKRLHELAKDNTA 714
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKN 676
Y+LLSN+YA+ GRW+DAA++R+ K LKK G SW++V+ + H F S +
Sbjct: 715 GYVLLSNMYASCGRWKDAARIRVLMKGTTLKKDGGCSWVQVRGQYHAFFSWEAKHPLSME 774
Query: 677 VCEVLEEL 684
+ E+L+ L
Sbjct: 775 IDEILDLL 782
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 190/445 (42%), Gaps = 46/445 (10%)
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN 236
++ + K G ++ + +LFD + + +S+ M A+EL+++ +
Sbjct: 155 MVSEHVKAGDIASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELYEQCP----SGS 210
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
+T+ +S R + +F M + I ++ C + I G
Sbjct: 211 VAFFTATISGFVRNELHHNALGVFRKMLSCRVRPNGITIVCMIKACVGAGEFGLALSIVG 270
Query: 297 FVIKGG-FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
IK FE + V+N+LI +Y + GD A+ +F E++ K++VSW AL+ Y+E+G D
Sbjct: 271 LAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSESGDLD 330
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
A V +M N +SW +I G EA+ L+ +M N
Sbjct: 331 GARRVLD--------AMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCF 382
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
S +LS CA L G IH +++ + N+ V L++MY KC + +F+ + +
Sbjct: 383 SSVLSACASLEDLRGGARIHARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQ 442
Query: 476 KDLITWNSMISGYGMN--------------------------GLGEN-----ALATFEEM 504
K+++ WNS++SGY N G +N AL +F M
Sbjct: 443 KNIVCWNSLVSGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALKSFNAM 502
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+ +G P + F +VL AC++ + G+ ++ IE + + D+ ++G
Sbjct: 503 LASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIK-LGIEESIFIGTALSDMYAKSGD 561
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLN 589
LQ + + MP E N W ++
Sbjct: 562 LQSSKRMFYQMP-ERNDVTWTAMIQ 585
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/391 (21%), Positives = 171/391 (43%), Gaps = 44/391 (11%)
Query: 31 LDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
+ CF +L C ++ L+ ++H + + G++ + F++ ++ +Y + + DA+ +F+
Sbjct: 379 ISCFSSVLSACASLEDLRGGARIHARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFD 438
Query: 88 TAP---------------FDCKSSSLL-------------WNSILRVNVSNGLYENALKL 119
T P ++ K + WN+I+ N + +ALK
Sbjct: 439 TLPQKNIVCWNSLVSGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALKS 498
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
+ M G + TF V+ AC + S G++ H +++G + ++ I L
Sbjct: 499 FNAMLASGQVPGEITFSSVLLACANLCS----LVTGKMAHAKTIKLGIEESIFIGTALSD 554
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MYAK G + S ++F ++ +N ++W M G A N + ++ LF+ M G+ PN T
Sbjct: 555 MYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGLAENGFAEESILLFEDMMATGMTPNEHT 614
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
+ +LL + + G +E+ + FD M+ GI + ++ V A A + + ++
Sbjct: 615 FLALLFACSHGGLVEQAIHYFDKMQALGISPKEKHYTCMVDVLAR--AGRLAEA-EALLM 671
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNL---FSEIEEKNIVSWNALITSYAEAGLCDE 356
K + AL+ + + ++A+ E+ + N + L YA G +
Sbjct: 672 KTPSKSEANSWAALLSACNTYRNEEIAERAAKRLHELAKDNTAGYVLLSNMYASCGRWKD 731
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
A + ++ G ++++ SW V G +
Sbjct: 732 AARIRVLMK---GTTLKKDGGCSWVQVRGQY 759
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 144/330 (43%), Gaps = 48/330 (14%)
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
F + ++ + K GD+ A+ LF + ++ +VS+ ++ + + G EAVE++ E+
Sbjct: 150 FAYDFMVSEHVKAGDIASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELY---EQC 206
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
GS V ++A I F N AL +FRKM +V N +TI ++ C +
Sbjct: 207 PSGS-----VAFFTATISGFVRNELHHNALGVFRKMLSCRVRPNGITIVCMIKACVGAGE 261
Query: 428 LNIGREIHGHVVRVS-MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
+ I G ++ + +I VQN L+ +Y++ G VF++++ KD+++W +++
Sbjct: 262 FGLALSIVGLAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLD 321
Query: 487 GYG-------------------------------MNGLGENALATFEEMIEAGFKPDGVA 515
Y G A+ + +M+ G +P+
Sbjct: 322 VYSESGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISC 381
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY-AC-MVDLLGRAGLLQEASDIVK 573
F +VLSAC+ + G RI R ++ + +C ++D+ + +A I
Sbjct: 382 FSSVLSACASLEDLRGGARIH---ARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFD 438
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+P + N W +L++ N + EAM
Sbjct: 439 TLP-QKNIVCWNSLVSG--YSYNGKMVEAM 465
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 317/583 (54%), Gaps = 62/583 (10%)
Query: 156 QIVHNHVLQMGFQGNV-HIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
+++H+ + GF + H + LI +Y+K+G + + LFD ++
Sbjct: 42 KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHRHHHHHGHTQ-------- 93
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
PN ++L ++A GR E +DL+ M++ G+ V
Sbjct: 94 -------------------APNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFT 134
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
VL VCA G+V+HG V++ GF +FV+ AL+ +Y K G++ A +F +
Sbjct: 135 YPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRML 194
Query: 335 EKNIVSWNALITSYAEAG-----------------LCDE--AVEVFSQLEKLDGGSM--- 372
+++V W A+IT Y +A L DE A+ V S + +L G M
Sbjct: 195 IRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAIS 254
Query: 373 ---------ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
E N ISW++++ + NGR +AL LF +MQ ++ N VT ++S C+
Sbjct: 255 RARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACS 314
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE--KKDLITW 481
+ ++GR++H V+ M+ + ++N +++MYMKCG L+ +F E ++D+ +W
Sbjct: 315 YLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSW 374
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
N +ISGYG++G G+ AL F M G +P+ + F ++LSACSHAGL++EGR+ F M +
Sbjct: 375 NVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK 434
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
+ P+M+HYACMVD+LGRAG L EA ++K +P P+ VWG LL +CR+H NT++ E
Sbjct: 435 -LSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGE 493
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI 661
A+ +F L E TG Y+L+SNIYAAS +W++ VR + K++GLKK A S IE ++
Sbjct: 494 IAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEV 553
Query: 662 HMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
H F + + + V +E LA++M+ G VPD +L ++
Sbjct: 554 HGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDV 596
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 216/424 (50%), Gaps = 63/424 (14%)
Query: 29 SLLDCFDHLLQQCKTIHQLKQVHNQLIVTG--ANASAFLAARVLSIYARFGRLFDARNVF 86
SL +DHLLQ C ++ LK +H+ L G + FLA R++ +Y++ G L AR +F
Sbjct: 23 SLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLA-RLIILYSKLGDLHSARTLF 81
Query: 87 ET----------APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
+ AP +S L N++LR + G A+ LY+ M+++GV + FT+P
Sbjct: 82 DHRHHHHHGHTQAP-----NSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYP 136
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
V++ C + FG++VH V++ GF ++ + L+ MYAK G++ D+ ++FD+
Sbjct: 137 FVLKVC----ASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDR 192
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL----------------------- 233
+ +++ + W M + + AL LF++M+ EG
Sbjct: 193 MLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMA 252
Query: 234 ------------EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
E N ++W S+LS + + GR + + LF+ M+ + +++S
Sbjct: 253 ISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSA 312
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS--EIEEKNIV 339
C+ L + H+G+ +H FVI + ++NA++ +Y K GD+ A +F+ E+ E+++
Sbjct: 313 CSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVS 372
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
SWN LI+ Y G EA+E+FS+++ ++G PN I++++++ A + G +E
Sbjct: 373 SWNVLISGYGVHGHGKEALELFSRMQ-VEG---VEPNDITFTSILSACSHAGLIDEGRKC 428
Query: 400 FRKM 403
F M
Sbjct: 429 FADM 432
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 108/202 (53%), Gaps = 10/202 (4%)
Query: 70 LSIYARFGRLFDARNVFETAP--FDC--KSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
+S+ + G+L D R A FD + + + WNS+L NG +AL L+ +M+
Sbjct: 237 ISVASAVGQLGDGRMAISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQA 296
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
+ T +++ AC ++GS G+ +HN V+ + + N ++ MY K G
Sbjct: 297 SECDPNPVTALIMVSACSYLGSKHL----GRKLHNFVISSKMDIDTTLRNAIMDMYMKCG 352
Query: 186 QMSDSFKLFDKVRV--KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
+ + ++F+ + ++ SWN++ SG+ ++ ALELF RM++EG+EPN +T+TS+
Sbjct: 353 DLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSI 412
Query: 244 LSSHARCGRLEETMDLFDMMRK 265
LS+ + G ++E F M K
Sbjct: 413 LSACSHAGLIDEGRKCFADMTK 434
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 198/638 (31%), Positives = 322/638 (50%), Gaps = 81/638 (12%)
Query: 55 IVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYE 114
IV G + F+ + +++ Y +F R+ AR VF+ + ++LWN+++ V N ++
Sbjct: 133 IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGM---LERDTVLWNTMVSGLVKNSCFD 189
Query: 115 NALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIV 174
A+ ++ M K G+ D T V+ + + G + +++GF + +++
Sbjct: 190 EAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDL----ALGMGIQCLAMKVGFHSHAYVI 245
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
L +Y+K G++ + LF ++ +
Sbjct: 246 TGLACLYSKCGEIETARLLFGQIG-----------------------------------Q 270
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
P+ V++ +++S + E ++ LF + G +V + +I ++ V H+ + I
Sbjct: 271 PDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCI 330
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
HGF K G V AL VY + +++ A+ LF E EK++ S
Sbjct: 331 HGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLAS-------------- 376
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
W+A+I +A NG E+A+ LF++MQ +V N VT
Sbjct: 377 -------------------------WNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVT 411
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
++ +LS CA+ AL++G+ +H + R S NI V L++MY KCG + E +F +
Sbjct: 412 VTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMP 471
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
+K+ +TWN+MISGYG++G G AL F EM+ + P GV F++VL ACSHAGLV EG
Sbjct: 472 EKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDE 531
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
IF MV + EP EHYACMVDLLGRAG L +A D ++ MP+EP VWG LL +C +H
Sbjct: 532 IFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIH 591
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
K+ ++A + ++F L + G Y+LLSNIY+A + +AA VR K + L K G +
Sbjct: 592 KDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTL 651
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
IEV +H+F+SG+ + +LE+L +M G
Sbjct: 652 IEVANTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAG 689
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 198/683 (28%), Positives = 338/683 (49%), Gaps = 83/683 (12%)
Query: 36 HLLQ---QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
H++Q + K + + KQ+H LI G FL ++++Y++ G L A +F+T P
Sbjct: 10 HVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP-- 67
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ + + W +++ N + A++ + MR G + F F IRAC +GS
Sbjct: 68 -QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEM-- 124
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H L+ G + + + L MY+K G M D+ K+F+++ K+ +S
Sbjct: 125 --GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-------- 174
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
WT+++ +++ G EE + F M + +
Sbjct: 175 ---------------------------WTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQ 207
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ L C L A G+ +H V+K GFE +FV NAL
Sbjct: 208 HVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALT------------------ 249
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
Y++AG + A VF G E NV+S++ +I + +
Sbjct: 250 -------------DMYSKAGDMESASNVF-------GIDSECRNVVSYTCLIDGYVETEQ 289
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
E+ L +F +++ + N T S L+ CA AAL G ++H V++++ +++ V +
Sbjct: 290 IEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI 349
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++MY KCG LE+ F++I I WNS++S +G +GLG++A+ FE M++ G KP+
Sbjct: 350 LVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPN 409
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
+ F+++L+ CSHAGLV EG F M + + + P EHY+C++DLLGRAG L+EA + +
Sbjct: 410 AITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFI 469
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
MP EPNA+ W + L +CR+H + ++ + A ++ L + +G+ +LLSNIYA +WE
Sbjct: 470 NRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWE 529
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
D VR+ + +KK+ G SW++V K H+F + + + E L+ L Q++ G
Sbjct: 530 DVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAG 589
Query: 693 CVPDNDIILWEMMGKKNVKRIQR 715
VP D + +M K + R
Sbjct: 590 YVPRTDSVPLDMDDSMKEKLLHR 612
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 155/397 (39%), Gaps = 76/397 (19%)
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
A+A V+ A GK +H +I G+ F+ N L+ +Y K G++ A LF +
Sbjct: 7 ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
++N+VSW A+I+ ++ EA+ F
Sbjct: 67 PQRNLVSWTAMISGLSQNSKFSEAIRTFC------------------------------- 95
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
M++ V S + CA ++ +G+++H ++ + + V + L
Sbjct: 96 --------GMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNL 147
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
+MY KCG + + VFE++ KD ++W +MI GY G E AL F++MI+ D
Sbjct: 148 EDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQ 207
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI-- 571
+ L AC GR + +V+ E + + D+ +AG ++ AS++
Sbjct: 208 HVLCSTLGACGALKACKFGRSVHSSVVK-LGFESDIFVGNALTDMYSKAGDMESASNVFG 266
Query: 572 ---------------------------------VKNMPMEPNAYVWGTLLNSCRMHKNTD 598
++ +EPN + + +L+ +C +
Sbjct: 267 IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALE 326
Query: 599 VAEAMASQIFGL-ITETTGSYMLLSNIYAASGRWEDA 634
+ +Q+ + E +L ++Y G E A
Sbjct: 327 QGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQA 363
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 92/179 (51%), Gaps = 2/179 (1%)
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
++ ++ ++ A++ L G+++H ++ + N L+NMY KCG L+ +F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
+ + +++L++W +MISG N A+ TF M G P AF + + AC+ G +
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
G+++ + ++ F I ++ + + D+ + G + +A + + MP + + W +++
Sbjct: 124 MGKQMHCLALK-FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMID 180
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 199/676 (29%), Positives = 339/676 (50%), Gaps = 86/676 (12%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGA-NASAFLAARVLSIYARFGRLFDARNVF-ETAPF 91
F LL+ + Q+H + G AF + ++ Y RFGR+ DA F E
Sbjct: 74 FPPLLRAAQGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHR 133
Query: 92 DCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR 151
D + WN++L N A+ L+ +M GV GD T V+ C +G
Sbjct: 134 DVPA----WNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALA 189
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
+ +H + ++ G + + N +I +Y K+G + + K+FD + ++ ++WN + SG
Sbjct: 190 LA----MHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISG 245
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
A+E+F M G+ P+ +T SL S+ A+CG
Sbjct: 246 HEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCG-------------------- 285
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLF 330
+C G+ +H ++++ G++ + NA++ +Y K ++ AQ +F
Sbjct: 286 --------DICG-------GRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMF 330
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+ ++ VSWN LIT Y + GL EA+ V+ ++K +G + G F S
Sbjct: 331 DSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEG----------LKPIQGTFVS- 379
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
+L + AL G +H ++ +N ++ V
Sbjct: 380 ---------------------------VLPAYSHLGALQQGTRMHALSIKTGLNLDVYVG 412
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
++++Y KCG L+E L+FEQ ++ WN++ISG G++G G AL+ F +M + G
Sbjct: 413 TCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGIS 472
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
PD V FV++L+ACSHAGLV++GR F+MM + I+P +HYACMVD+ GRAG L +A D
Sbjct: 473 PDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFD 532
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
++NMP++P++ +WG LL +CR+H N ++ + + +F L + G Y+L+SN+YA G+
Sbjct: 533 FIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGK 592
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN--SLQSDLKNVCEVLEELALQM 688
W+ +VR + + L+K G S IEVKR +++F SGN ++ + + L +L ++
Sbjct: 593 WDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKI 652
Query: 689 ENKGCVPDNDIILWEM 704
+ G VPD +L ++
Sbjct: 653 RSLGYVPDYSFVLQDV 668
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 24/261 (9%)
Query: 29 SLLDCFDHL--LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
S+L + HL LQQ +H L I TG N ++ V+ +YA+ G+L +A +F
Sbjct: 379 SVLPAYSHLGALQQGTRMHALS------IKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLF 432
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
E P + S+ WN+++ +G AL L+ +M++ G+ D TF ++ AC G
Sbjct: 433 EQTP---RRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAG 489
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISW 205
+F ++ G + ++ M+ + GQ+ D+F + +K + W
Sbjct: 490 LVDQGRNFFNMMQT---AYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIW 546
Query: 206 NMMFSGFALNFDCDGALELFK--RMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDM 262
+ ++ G +E+ K L L+P V + L+S+ +A+ G+ + ++ +
Sbjct: 547 GALLGACRIH----GNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSL 602
Query: 263 MRKRGIE--VGAEAIAVVLSV 281
+R++ ++ G +I V SV
Sbjct: 603 VRRQNLQKTPGWSSIEVKRSV 623
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 222/747 (29%), Positives = 359/747 (48%), Gaps = 130/747 (17%)
Query: 28 NSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARF--GRLFDARNV 85
NS++D H L + + H Q I G +A + +LS Y R G L A N+
Sbjct: 5 NSVIDSSKHAL------YNIFITHCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNL 58
Query: 86 FETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR--ACK 143
F+ ++ WN+++ V++G +A +LY M+ G++ D +TF +++ AC
Sbjct: 59 FDEMS---HRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACA 115
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
R GQ VH+ +++MG++ +V+ + L+ MYAK ++ D+F +F + +N +
Sbjct: 116 C------RLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSV 169
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL------------------- 244
SWN + +GF L D D A L + ME EG+ + T++ LL
Sbjct: 170 SWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKI 229
Query: 245 ----------------SSHARCGRLEETMDLFD--------------------------- 261
+S+++CG LE+ +FD
Sbjct: 230 IKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETA 289
Query: 262 -----MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
M++ G E ++S C+ GK +HG VIK G E V + NA+I +
Sbjct: 290 FKLFLDMQQFGFEPDIYTYTTIISACSH---KDNGKSLHGLVIKRGLEQLVPICNAVIAM 346
Query: 317 Y--GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
Y ++ A N+F +E K+ VSWN+++T +++ G
Sbjct: 347 YLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTG---------------------- 384
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
E AL LF M+ A V + S +L C++ A L +G++I
Sbjct: 385 -----------------HSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQI 427
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
H V+ N V + L+ MY KCG +E+ FE+ K ITWNS++ Y +G G
Sbjct: 428 HVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQG 487
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
+ AL F +M + K D + FVA L+ACSH GLV +GR + M ++ I P+MEHYAC
Sbjct: 488 DVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYAC 547
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
VDL GRAG L EA ++++MP +P+A VW TLL +CR + ++A +AS + L E
Sbjct: 548 AVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPEE 607
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
+Y++LSN+Y RW++ A + + + +KKV G SWIEVK ++H F + + S
Sbjct: 608 HCTYVILSNMYGHLKRWDEKACMARLMRERKVKKVPGWSWIEVKNEVHAFIADDRCHSHF 667
Query: 675 KNVCEVLEELALQMENKGCVPDNDIIL 701
+ + ++LE+L ++ V +D +L
Sbjct: 668 EEIYQILEQLMEDIKWLDSVAGSDSLL 694
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/577 (32%), Positives = 317/577 (54%), Gaps = 66/577 (11%)
Query: 158 VHNHVLQMGF-QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H VL + + N + +L+ +YA G+ + +FD++ KN + +N+M + N
Sbjct: 40 LHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNH 99
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
AL ++K M +G P+ T+ +L + +R L
Sbjct: 100 LYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSL----------------------- 136
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
+G IHG V+K G + ++V N LI +YGK +K AQ + EI +
Sbjct: 137 ------------WVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCR 184
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS------------------------- 371
++VSWN++++ YA+ G ++A+E+ ++E L+
Sbjct: 185 DVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKE 244
Query: 372 ----MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
+ + +VISW+ +I + +N +EA+ L+ +M+ V + V+I +L + +A
Sbjct: 245 MFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSA 304
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L++GR +H R + N+L++N L++MY KCGCL + VF Q++ +D+++W S+IS
Sbjct: 305 LSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISA 364
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
YG G G +A+A F EM +G PD +AFV+VL+ACSHAGL+++GR F++M E I P
Sbjct: 365 YGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMA-ECGITP 423
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
++EH+AC+VDLLGRAG + EA ++ MP+EP+ VWG LL++CR++ N ++ A ++
Sbjct: 424 KLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILAADKL 483
Query: 608 FGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG 667
L E +G Y+LLSNIYA +GRW D A +R + KG+KK+ G S +E+ +H F +G
Sbjct: 484 LMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHTFLAG 543
Query: 668 NSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ K + E L+ L +M+ G +P+ D L ++
Sbjct: 544 DHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDV 580
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 212/465 (45%), Gaps = 75/465 (16%)
Query: 32 DCFDHLLQQCKTIHQLKQVHNQLIVTGA-NASAFLAARVLSIYARFGRLFDARNVFETAP 90
D + +L Q I+ LK++H +++ + + +++ +YA G AR++F+
Sbjct: 22 DLCNRILDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEI- 80
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + +N ++R V+N LY++AL +Y M G + D +T+P V++A S
Sbjct: 81 --TDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWV 138
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G +H VL++G N+++ N LI MY K + ++ ++ D++ ++ +SWN M S
Sbjct: 139 ----GLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVS 194
Query: 211 GFALNFDCDGALELFKRMELEGLEPN---------------------------------F 237
+A N + ALEL + ME L+PN
Sbjct: 195 VYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDNVLYVKEMFLKLTKKSV 254
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
++W +++ + +E + L+ M G+E +I VL DL+A +G+ +H F
Sbjct: 255 ISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKF 314
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
+ + ++NALI +Y K G ++ A+ +F++++ +++VSW ++I++Y + G +A
Sbjct: 315 AERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDA 374
Query: 358 VEVFSQLEK----------------------LDGGSME---------RPNVISWSAVIGA 386
V VF+++ LD G P + ++ V+
Sbjct: 375 VAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDL 434
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
G+ +EA R+M L + LLS C + +NIG
Sbjct: 435 LGRAGKIDEAYGFIRQMPLE---PDERVWGPLLSACRVYSNMNIG 476
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 197/672 (29%), Positives = 333/672 (49%), Gaps = 83/672 (12%)
Query: 36 HLLQ---QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
HL+Q + K +++ KQ+H LI G + FL+ L++Y++ G L +F+
Sbjct: 80 HLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMS-- 137
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ + + W SI+ N ++ AL + +MR G + F V++AC +G+ +F
Sbjct: 138 -QRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQF-- 194
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G VH V++ GF + + + L MY+K G++SD+ K F+++ K+
Sbjct: 195 --GTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDA---------- 242
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
V WTS++ + G ++ + + M + +
Sbjct: 243 -------------------------VLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQ 277
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ LS C+ L A GK +H ++K GFE F+ NAL +Y K GD+ A N+F +
Sbjct: 278 HVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVF-Q 336
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
I I +++S +A+I + +
Sbjct: 337 IHSDCI-------------------------------------SIVSLTAIIDGYVEMDQ 359
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
E+AL F ++ + N T + L+ CA A L G ++HG VV+ + ++ V +
Sbjct: 360 IEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSST 419
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++MY KCG + +F++IE D I WN+++ + +GLG NA+ TF MI G KP+
Sbjct: 420 LVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPN 479
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
V FV +L CSHAG+V +G F M + + + P+ EHY+C++DLLGRAG L+EA D +
Sbjct: 480 AVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFI 539
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
NMP EPN + W + L +C++H + + A+ A ++ L E +G+++LLSNIYA +WE
Sbjct: 540 NNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWE 599
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
D +R K + K+ G SW++++ K H+F + K + E L+ L Q++ G
Sbjct: 600 DVQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIG 659
Query: 693 CVPDNDIILWEM 704
VP + +L +M
Sbjct: 660 YVPQTESVLIDM 671
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 120/224 (53%), Gaps = 9/224 (4%)
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
++++ T++ L+ A + LN G+++H ++R N + N LN+Y KCG L+
Sbjct: 72 LSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIK 131
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
+F+++ ++++++W S+I+G+ N + AL++F +M G A +VL AC+ G
Sbjct: 132 LFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGA 191
Query: 529 VNEGRRIFDMMVR-EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
+ G ++ ++V+ F E + + + D+ + G L +A + MP + +A +W ++
Sbjct: 192 IQFGTQVHCLVVKCGFGCELFVG--SNLTDMYSKCGELSDACKAFEEMPCK-DAVLWTSM 248
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETT--GSYMLLSNIYAASG 629
++ KN D +A+ + + ++T+ ++L S + A S
Sbjct: 249 IDG--FVKNGDFKKALTAYM-KMVTDDVFIDQHVLCSTLSACSA 289
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 216/667 (32%), Positives = 351/667 (52%), Gaps = 42/667 (6%)
Query: 53 QLIVTGANASAFLAAR--VLSIYARFGRLFDARNVFETAPFDCKSSSLL-WNSILRVNVS 109
+L++ S F+ +R +++ Y+R G++ AR VF+ + + +++ WNSI+
Sbjct: 86 RLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFD----EMRDKNIISWNSIVAGYFQ 141
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH-NHVLQMGFQ 168
N + A ++ KM + + + G + G I V +
Sbjct: 142 NKRPQEAQNMFDKMSERNTIS-------------WNGLVSGYINNGMINEAREVFDRMPE 188
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
NV ++ Y K G +S++ LF ++ KN +SW +M G D A LF M
Sbjct: 189 RNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMM 248
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E + VT T+++ + + GRL E LFD M +R + ++ + D
Sbjct: 249 P----EKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNV---VSWTTMITGYVQNQQVD 301
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
K+ K +K C G + A LF+ + K++V+ NA+I +
Sbjct: 302 IARKLFEVMPEKNEVSWTAMLKGYTNC-----GRLDEASELFNAMPIKSVVACNAMILCF 356
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+ G +A +VF Q+ + D G+ WSA+I + G +AL+LFR MQ +
Sbjct: 357 GQNGEVPKARQVFDQMREKDEGT--------WSAMIKVYERKGLELDALELFRMMQREGI 408
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
N ++ +LSVCA A L+ GREIH +VR + ++ V + LL+MY+KCG L +
Sbjct: 409 RPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQ 468
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
VF++ KD++ WNS+I+GY +GLG AL F +M +G PD V FV VLSACS+ G
Sbjct: 469 VFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGN 528
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
V +G IF+ M ++++E ++EHYACMVDLLGRAG L EA D+++ MPME +A +WG LL
Sbjct: 529 VKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
+CR H D+AE A ++ L + G ++LLSNIYA+ GRW+D A++R + + + + K
Sbjct: 589 GACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSK 648
Query: 649 VAGQSWIEVKRKIHMFSSGNSL-QSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGK 707
G SWI V++K+H F+ G+S + + +LE L+ + G PD +L ++ +
Sbjct: 649 YPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEE 708
Query: 708 KNVKRIQ 714
+ V+ ++
Sbjct: 709 EKVQSLE 715
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 28/232 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+++H QL+ + + ++A+ +LS+Y + G L A+ VF+ F K ++WNSI+
Sbjct: 432 REIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDR--FAVK-DVVMWNSIITGY 488
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG----------SFRFRFSFGQI 157
+GL AL+++ M G++ D TF V+ AC + G S ++ Q
Sbjct: 489 AQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQK 548
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+ ++ + G +NE + + KM +D+ I W + +
Sbjct: 549 IEHYACMVDLLGRAGKLNEAMDLIEKMPMEADA------------IIWGALLGACRTHMK 596
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGI 268
D A K++ + LEP LLS+ +A GR ++ +L MR R +
Sbjct: 597 LDLAEVAAKKLLV--LEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRV 646
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 209/712 (29%), Positives = 368/712 (51%), Gaps = 77/712 (10%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
LL+ C + +L Q+ +I G +V+S++ +FG +A VFE
Sbjct: 53 LLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKL--- 109
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMR----KLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+L++ +L+ N +AL +++M +L V+GD + +++ C
Sbjct: 110 DVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRL-VVGD---YACLLQLC----GENLDL 161
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H ++ GF+ N+ ++ ++ +YAK Q+ +++K+F++++ K+ +SW + +G+
Sbjct: 162 KKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGY 221
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA-----RCGRLEETMDLFDMMRKRG 267
A N AL+L +M+ G +P+ VT S+L + A R GR +
Sbjct: 222 AQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGR---------SIHGYA 272
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
G E++ V + D+ I V KG V N +I ++G+ + A
Sbjct: 273 FRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAF 332
Query: 328 NLF-------------------------SEIE--------------EKNIVSWNALITSY 348
F ++E + N+ N+LI+ Y
Sbjct: 333 ATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMY 392
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
++ D A +F+ LEK + ++W+A+I +A NG +EAL+LF MQ +
Sbjct: 393 SKCKRVDIAASIFNNLEKTN---------VTWNAMILGYAQNGCVKEALNLFCMMQSQGI 443
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+ T+ G+++ A+ + + IHG VR M+ N+ V L++MY KCG ++
Sbjct: 444 KLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARK 503
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
+F+ ++++ +ITWN+MI GYG +G+G+ L F EM + KP+ + F++V+SACSH+G
Sbjct: 504 LFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGF 563
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
V EG +F M ++ +EP M+HY+ MVDLLGRAG L +A + ++ MP++P V G +L
Sbjct: 564 VEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAML 623
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
+C++HKN ++ E A ++F L + G ++LL+NIYA++ W+ AKVR + + KGL K
Sbjct: 624 GACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHK 683
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
G SW+E++ +IH F SG++ + K + LE L +++ G VPD D I
Sbjct: 684 TPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPDSI 735
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 198/574 (34%), Positives = 306/574 (53%), Gaps = 48/574 (8%)
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN--VHIVNELIGMYAKMGQMS 188
D + +IR C + S + +H+H+L + + + N LI MY K G++
Sbjct: 59 DPVGYAALIRRCGAANAI----SAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLP 114
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ +LF+ + +N +W + + F+ N AL F+RM G P+ VT++ +L++ A
Sbjct: 115 YARELFESMPSRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAAIA 174
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
M I+ G E IH + G V
Sbjct: 175 -------------QMGAAAIDQGRE--------------------IHRYARISGLLPNVV 201
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V A+I +YGK G + A+ F E++ KN V+WNA++T+Y G EA+E+F ++ D
Sbjct: 202 VGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNYKLDGRDREALELFREMHDAD 261
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ-LAKVVANSVTISGLLSVCAESAA 427
+ W+A+I A+A +GRG++ALDL+R M + T ++ VCAE +A
Sbjct: 262 S--------VCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSA 313
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L GR IH V + + N+LV N L++MY KCGCL+E VF ++ KD I+WN++IS
Sbjct: 314 LKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTIISS 373
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
Y +G + AL ++EM G KP V FV +LSACSH GLV +G F M + RI+P
Sbjct: 374 YAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKP 433
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
+ H+ C++DLLGR G L EA ++K+MP++ NA W +LL +C+ H + A Q+
Sbjct: 434 SVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQV 493
Query: 608 FGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG 667
+ T+G Y+LLSNIYAA+GRW+D K+R +G+KK G+SWIE+ +H F SG
Sbjct: 494 VDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIEIGDVVHEFVSG 553
Query: 668 NSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+S + + L ++ +M+ G VPD +
Sbjct: 554 DSSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVF 587
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 201/395 (50%), Gaps = 31/395 (7%)
Query: 37 LLQQC---KTIHQLKQVHNQLIVTGANAS--AFLAARVLSIYARFGRLFDARNVFETAPF 91
L+++C I +++H+ ++ + S FLA ++ +Y + GRL AR +FE+ P
Sbjct: 66 LIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYARELFESMP- 124
Query: 92 DCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR 151
+ W + NG + AL + +M + G D TF +++ A
Sbjct: 125 --SRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILAA--IAQMGAAA 180
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
G+ +H + G NV + +I MY K G++ D+ F++++ KN ++WN M +
Sbjct: 181 IDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTN 240
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-------DMMR 264
+ L+ ALELF+ M + + V W ++++++A+ GR ++ +DL+ D+
Sbjct: 241 YKLDGRDREALELFREMH----DADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAP 296
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
K+G V V+ VCA+L+A G+ IH V F+ + V NAL+ +YGK G +
Sbjct: 297 KQGTFV------TVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLD 350
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A ++F ++ K+ +SWN +I+SYA G D+A+ ++ +++ L G +P +++ ++
Sbjct: 351 EALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMD-LQG---VKPTEVTFVGLL 406
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
A + G + LD F +MQ + SV G +
Sbjct: 407 SACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCI 441
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 216/667 (32%), Positives = 351/667 (52%), Gaps = 42/667 (6%)
Query: 53 QLIVTGANASAFLAAR--VLSIYARFGRLFDARNVFETAPFDCKSSSLL-WNSILRVNVS 109
+L++ S F+ +R +++ Y+R G++ AR VF+ + + +++ WNSI+
Sbjct: 86 RLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFD----EMRDKNIISWNSIVAGYFQ 141
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH-NHVLQMGFQ 168
N + A ++ KM + + + G + G I V +
Sbjct: 142 NKRPQEAQNMFDKMSERNTIS-------------WNGLVSGYINNGMINEAREVFDRMPE 188
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
NV ++ Y K G +S++ LF ++ KN +SW +M G D A LF M
Sbjct: 189 RNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMM 248
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E + VT T+++ + + GRL E LFD M +R + ++ + D
Sbjct: 249 P----EKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNV---VSWTTMITGYVQNQQVD 301
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
K+ K +K C G + A LF+ + K++V+ NA+I +
Sbjct: 302 IARKLFEVMPEKNEVSWTAMLKGYTNC-----GRLDEASELFNAMPIKSVVACNAMILCF 356
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+ G +A +VF Q+ + D G+ WSA+I + G +AL+LFR MQ +
Sbjct: 357 GQNGEVPKARQVFDQMREKDEGT--------WSAMIKVYERKGLELDALELFRMMQREGI 408
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
N ++ +LSVCA A L+ GREIH +VR + ++ V + LL+MY+KCG L +
Sbjct: 409 RPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQ 468
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
VF++ KD++ WNS+I+GY +GLG AL F +M +G PD V FV VLSACS+ G
Sbjct: 469 VFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGN 528
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
V +G IF+ M ++++E ++EHYACMVDLLGRAG L EA D+++ MPME +A +WG LL
Sbjct: 529 VKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
+CR H D+AE A ++ L + G ++LLSNIYA+ GRW+D A++R + + + + K
Sbjct: 589 GACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSK 648
Query: 649 VAGQSWIEVKRKIHMFSSGNSL-QSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGK 707
G SWI V++K+H F+ G+S + + +LE L+ + G PD +L ++ +
Sbjct: 649 YPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYPDQSFVLHDVDEE 708
Query: 708 KNVKRIQ 714
+ V+ ++
Sbjct: 709 EKVQSLE 715
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 28/232 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+++H QL+ + + ++A+ +LS+Y + G L A+ VF+ F K ++WNSI+
Sbjct: 432 REIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDR--FAVK-DVVMWNSIITGY 488
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG----------SFRFRFSFGQI 157
+GL AL+++ M G++ D TF V+ AC + G S ++ Q
Sbjct: 489 AQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQK 548
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+ ++ + G +NE + + KM +D+ I W + +
Sbjct: 549 IEHYACMVDLLGRAGKLNEAMDLIEKMPMEADA------------IIWGALLGACRTHMK 596
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGI 268
D A K++ + LEP LLS+ +A GR ++ +L MR R +
Sbjct: 597 LDLAEVAAKKLLV--LEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRV 646
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 205/662 (30%), Positives = 334/662 (50%), Gaps = 85/662 (12%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F LQ C+ +K Q+H ++ +G ++A ++++Y RFG++ +A +F
Sbjct: 163 FAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLE 222
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ WNS+L + NGLY AL+ + ++ + D + +I A +G
Sbjct: 223 ---GKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLN 279
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H + ++ GF N+ + N LI MYAK MS + FD + K+ ISW
Sbjct: 280 ----GKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISW----- 330
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
T+ + +A+ + ++L ++ G++V
Sbjct: 331 ------------------------------TTAAAGYAQNKCYLQALELLRQLQMEGMDV 360
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
A I +L C L K IHG+ I+GG D V ++N +I VYG
Sbjct: 361 DATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPV-LQNTIIDVYG------------ 407
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
E G+ D AV +F S+E +V+SW+++I + N
Sbjct: 408 -------------------ECGIIDYAVRIFE--------SIECKDVVSWTSMISCYVHN 440
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
G +AL++F M+ + + VT+ +LS + L G+EIHG ++R +
Sbjct: 441 GLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSIS 500
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
N L++MY +CG +E+ + +F + ++LI W +MIS YGM+G GE A+ F M +
Sbjct: 501 NTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKII 560
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
PD + F+A+L ACSH+GLVNEG+ ++M E+++EP EHY C+VDLLGR L+EA
Sbjct: 561 PDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQ 620
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
IVK+M EP VW LL +CR+H N ++ E A ++ L + G+Y+L+SN++AA+GR
Sbjct: 621 IVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGR 680
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
W+D +VR+ K GL K G SWIEV KIH F S + L + + + L ++ +++
Sbjct: 681 WKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKR 740
Query: 691 KG 692
+G
Sbjct: 741 EG 742
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 165/665 (24%), Positives = 291/665 (43%), Gaps = 113/665 (16%)
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+Y + G + DA +F+ + S WN+++ VSNG AL++Y +MR LGV D
Sbjct: 1 MYGKCGSVLDAEMIFDKMS---ERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFD 57
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
+TFP++++AC + G +H ++ G V +VN L+ +YAK
Sbjct: 58 SYTFPVLLKACGIVEDL----FCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCN------ 107
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
D +GA +LF RM + + V+W S++S+++ G
Sbjct: 108 -------------------------DINGARKLFDRMYVRN---DVVSWNSIISAYSGNG 139
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
E + LF M K G+ A L C D + +G IH ++K G V+V N
Sbjct: 140 MCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVAN 199
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
AL+ +Y + G + EA +F G+
Sbjct: 200 ALVAMYVRFGKMP-------------------------------EAAVIF--------GN 220
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
+E ++++W++++ F NG EAL+ F +Q A + + V+I ++ L G
Sbjct: 221 LEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNG 280
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
+EIH + ++ + NILV N L++MY KC C+ G F+ + KDLI+W + +GY N
Sbjct: 281 KEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQN 340
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
AL ++ G D ++L AC + + + I +R +P +++
Sbjct: 341 KCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQN 400
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
++D+ G G++ A I +++ + + W +++ SC +H A ++F +
Sbjct: 401 --TIIDVYGECGIIDYAVRIFESIECK-DVVSWTSMI-SCYVHNGL---ANKALEVFSSM 453
Query: 612 TET--TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
ET Y+ L +I +A +S KG K++ G +I K I S N+
Sbjct: 454 KETGLEPDYVTLVSILSAV--------CSLSTLKKG-KEIHG--FIIRKGFILEGSISNT 502
Query: 670 LQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMM---------GKKNVKRIQRIRADN 720
L D+ C +E+ A ++ C + ++ILW M G+ V+ R++ +
Sbjct: 503 L-VDMYARCGSVED-AYKIFT--CTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEK 558
Query: 721 IKSKH 725
I H
Sbjct: 559 IIPDH 563
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 230/762 (30%), Positives = 357/762 (46%), Gaps = 123/762 (16%)
Query: 12 FSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLS 71
F P N S TY N +L C +++ K++H+ ++ + L +L+
Sbjct: 146 FHPKNSSIQLESSTYGNLILAC-----TSIRSLKYGKKIHDHILKSNCQPDLVLQNHILN 200
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+Y + G L DAR F+T + + W ++ NG +A+ +Y++M + G D
Sbjct: 201 MYGKCGSLKDARKAFDTMQL---RNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPD 257
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
TF +I+AC G G+ +H HV++ G+ ++ N LI MY + GQ+ +
Sbjct: 258 PLTFGSIIKACCIAGDI----DLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHAS 313
Query: 192 KLFDKVRVKNYISWNMMFSGFA-LNFDCDGALELFKRMELEGL-EPNFVTWTSLLSSHAR 249
+F + K+ ISW M +GF L ++ + AL LF+ M +G +PN + S
Sbjct: 314 DVFTMISTKDLISWASMITGFTQLGYEIE-ALYLFRDMFRQGFYQPNEFIFGS------- 365
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFV 309
V S C L G+ IHG K G VF
Sbjct: 366 ----------------------------VFSACRSLLEPEFGRQIHGMCAKFGLGRNVFA 397
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
+L +Y K G + A F +IE ++VSWNA+I +++++G +EA+ F Q+ +
Sbjct: 398 GCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQM--MHT 455
Query: 370 GSMERPNVISWSAVIGAFASN----------------GRGEEAL---------------- 397
G M P+ I++ +++ A S G +EA
Sbjct: 456 GLM--PDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLH 513
Query: 398 DLFRKMQLAKVVANSVTISGLLSVC----------------------------------- 422
D F + AN V+ + +LS C
Sbjct: 514 DAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTC 573
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
AE A+L +G ++H V+ + ++ V N L++MY KCG L+ VF + D+++W+
Sbjct: 574 AELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWS 633
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
S+I GY GLG AL F M G +P+ V ++ VLSACSH GLV EG ++ M E
Sbjct: 634 SLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIE 693
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
I P EH +CMVDLL RAG L EA + +K M P+ +W TLL SC+ H N D+AE
Sbjct: 694 LGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAER 753
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
A I L + + +LLSNI+A+ G W++ A++R K G++KV GQSWI VK +IH
Sbjct: 754 AAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQIH 813
Query: 663 MFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN--DIILW 702
+F S ++ ++ +LE+L LQM + G P DI +W
Sbjct: 814 VFFSEDNSHQQRGDIYTMLEDLWLQMLDDGYDPCQRLDISIW 855
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 158/351 (45%), Gaps = 45/351 (12%)
Query: 255 ETMDLFDMMRKRG-IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
E +D F+ K I++ + ++ C + + GK IH ++K + + ++N +
Sbjct: 139 EALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHI 198
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ +YGK G +K A+ F +M+
Sbjct: 199 LNMYGKCGSLKDARKAFD---------------------------------------TMQ 219
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
NV+SW+ +I ++ NG+ +A+ ++ +M + + +T ++ C + +++GR+
Sbjct: 220 LRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQ 279
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+HGHV++ + +++ QN L++MY + G + VF I KDLI+W SMI+G+ G
Sbjct: 280 LHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGY 339
Query: 494 GENALATFEEMIEAGF-KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
AL F +M GF +P+ F +V SAC GR+I M + F + +
Sbjct: 340 EIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAK-FGLGRNVFAG 398
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+ D+ + G L A + P+ W ++ + + DV EA+
Sbjct: 399 CSLCDMYAKFGFLPSAIRAFYQIE-SPDLVSWNAIIAA--FSDSGDVNEAI 446
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 210/673 (31%), Positives = 338/673 (50%), Gaps = 115/673 (17%)
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K S WN++L+ +E L + M + D FT P+ ++AC G R +
Sbjct: 3 KRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKAC---GELR-EVN 58
Query: 154 FGQIVHNHVLQ-MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
+G+++H V + + ++++ + LI MY K G+M ++ ++FD++ + ++W+ M SGF
Sbjct: 59 YGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGF 118
Query: 213 ALNFDCDGALELFKRMEL-EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
N A+E F+RM + + P+ VT +L+S+
Sbjct: 119 EKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSA------------------------- 153
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
C L+ +G+ +HGFVI+ GF + + + N+L+ Y K K A NLF
Sbjct: 154 ----------CTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK 203
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS-- 389
I EK+++SW+ +I Y + G EA+ VF+ + +D G+ PNV + V+ A A+
Sbjct: 204 MIAEKDVISWSTVIACYVQNGAAAEALLVFNDM--MDDGT--EPNVATVLCVLQACAAAH 259
Query: 390 ---NGR------------------------------GEEALDLFRKMQLAKVVANSVTIS 416
GR EEA +F ++ VV+ IS
Sbjct: 260 DLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALIS 319
Query: 417 G--------------------------------LLSVCAESAALNIGREIHGHVVRVSMN 444
G +L C+E L + H +V++ +
Sbjct: 320 GFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFD 379
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
N + L+ +Y +CG L VF I KD + W S+I+GYG++G G AL TF M
Sbjct: 380 SNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHM 439
Query: 505 IEAG-FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
+++ KP+ V F+++LSACSHAGL++EG RIF +MV ++R+ P +EHYA +VDLLGR G
Sbjct: 440 VKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVG 499
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
L A +I K MP P + GTLL +CR+H+N ++AE +A ++F L + G YML+SN
Sbjct: 500 DLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSN 559
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
+Y G WE+ K+R S K +G+KK +S IE++RK+H F + + L + + V +L+E
Sbjct: 560 VYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKE 619
Query: 684 LALQMEN--KGCV 694
L L M+ + CV
Sbjct: 620 LDLHMKEDLENCV 632
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 120/234 (51%), Gaps = 6/234 (2%)
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
M + ++ W+ ++ + + + EE L F M + ++ T+ L C E +N G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 432 REIHGHVVR-VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
IHG V + V++ ++ V + L+ MY+KCG + E +F+++EK D++TW+SM+SG+
Sbjct: 61 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120
Query: 491 NGLGENALATFEEMIEAG-FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
NG A+ F M+ A PD V + ++SAC+ GR + ++R +
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR-GFSNDL 179
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+++ ++ +EA ++ K M E + W T++ +C + +N AEA+
Sbjct: 180 SLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTVI-ACYV-QNGAAAEAL 230
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 111/234 (47%), Gaps = 16/234 (6%)
Query: 37 LLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+LQ C H L+Q H I G ++ ++ +Y + +A VF P
Sbjct: 251 VLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP--- 307
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + W +++ NG+ +++ + M L + T P I K +GS
Sbjct: 308 RKDVVSWVALISGFTLNGMAHRSIEEFSIM-----LLENNTRPDAILMVKVLGSCS-ELG 361
Query: 154 F---GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
F + H++V++ GF N I L+ +Y++ G + ++ K+F+ + +K+ + W + +
Sbjct: 362 FLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLIT 421
Query: 211 GFALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
G+ ++ ALE F M + ++PN VT+ S+LS+ + G + E + +F +M
Sbjct: 422 GYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 475
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 182/513 (35%), Positives = 286/513 (55%), Gaps = 14/513 (2%)
Query: 155 GQIVHNHVLQMGFQ-GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H H+ GF+ N + N LIGMY K G+ D+ K+FD++ ++N SWN M SGF
Sbjct: 65 GKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFV 124
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ A +F M E + V+W +++ +A+ G L E + F +R+ GI+
Sbjct: 125 KSGMLVRARVVFDSMP----ERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEF 180
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ A +L+ C + + HG V+ GF V + ++I Y K G ++ A+ F E+
Sbjct: 181 SFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
K+I W LI+ YA+ G + A ++F + M N +SW+A+I + G G
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAADKLFRE--------MPEKNPVSWTALIAGYVRQGSG 292
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
+ ALDLFRKM +V T S L A A+L G++IHG+++R ++ N +V + L
Sbjct: 293 DLALDLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTSSL 352
Query: 454 LNMYMKCGCLEEGHLVFE-QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
++MY K G LE VF +K+D + WN+MIS +GLG AL ++MI+ P+
Sbjct: 353 IDMYSKSGSLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKALQMLDDMIKFRVHPN 412
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
V +L+ACSH+GLV EG R F+ M + I P EHYAC++DLLGRAG +E +
Sbjct: 413 RTTLVVILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMSKI 472
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
+ MP EP+ ++W +L CR+H N ++ + A ++ L E++ Y+LLS+IYA G+WE
Sbjct: 473 EEMPFEPDKHIWNAILGVCRIHGNEELGKKAAEELIKLDPESSAPYILLSSIYADHGKWE 532
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFS 665
K+R K + + K SWIE++ K+ F+
Sbjct: 533 LVEKLRGIMKKRRVNKEKAVSWIEIENKVKAFT 565
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 183/385 (47%), Gaps = 41/385 (10%)
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
SLLS HA L + + + + ++GI + + +A +L C D + GK IH +
Sbjct: 16 SLLSRHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 302 GFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
GF+ + N LI +Y K G A +F ++ +N+ SWN +++ + ++G+ A V
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRARVV 135
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
F SM +V+SW+ ++ +A +G EAL F++++ + + N + +GLL+
Sbjct: 136 FD--------SMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLT 187
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL-- 478
C +S L + ++ HG V+ N+++ +++ Y KCG +E F+++ KD+
Sbjct: 188 ACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHI 247
Query: 479 -----------------------------ITWNSMISGYGMNGLGENALATFEEMIEAGF 509
++W ++I+GY G G+ AL F +MI
Sbjct: 248 WTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRV 307
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
KP+ F + L A + + G++I M+R + P + ++D+ ++G L+ +
Sbjct: 308 KPEQFTFSSCLCASASIASLRHGKQIHGYMIRT-NVRPNAIVTSSLIDMYSKSGSLEASE 366
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMH 594
+ + + + +W T++++ H
Sbjct: 367 RVFRICYDKQDCVLWNTMISALAQH 391
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 189/411 (45%), Gaps = 51/411 (12%)
Query: 31 LDCFDHLLQQC---KTIHQLKQVHNQLIVTG-ANASAFLAARVLSIYARFGRLFDA---- 82
D LLQQC K++ Q K +H L +TG + L+ ++ +Y + G+ DA
Sbjct: 46 FDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVF 105
Query: 83 ---------------------------RNVFETAPFDCKSSSLLWNSILRVNVSNGLYEN 115
R VF++ P + + WN+++ +G
Sbjct: 106 DQMHLRNLYSWNNMVSGFVKSGMLVRARVVFDSMP---ERDVVSWNTMVIGYAQDGNLHE 162
Query: 116 ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVN 175
AL + ++R+ G+ + F+F ++ AC + Q H VL GF NV +
Sbjct: 163 ALWFFKELRRSGIKFNEFSFAGLLTAC----VKSRQLQLNQQAHGQVLVAGFLSNVVLSC 218
Query: 176 ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
+I YAK GQM + + FD++ VK+ W + SG+A D + A +LF+ M E
Sbjct: 219 SIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAADKLFREMP----EK 274
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
N V+WT+L++ + R G + +DLF M ++ + L A +A+ GK IH
Sbjct: 275 NPVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIH 334
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK-NIVSWNALITSYAEAGLC 354
G++I+ V ++LI +Y K G ++ ++ +F +K + V WN +I++ A+ GL
Sbjct: 335 GYMIRTNVRPNAIVTSSLIDMYSKSGSLEASERVFRICYDKQDCVLWNTMISALAQHGLG 394
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+A+++ + K PN + ++ A + +G EE + F M +
Sbjct: 395 HKALQMLDDMIKF----RVHPNRTTLVVILNACSHSGLVEEGVRWFESMTV 441
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 210/660 (31%), Positives = 330/660 (50%), Gaps = 94/660 (14%)
Query: 34 FDHLLQQCKTI----HQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLF-DARNVFET 88
+ LLQ C + H L Q+H +I +G F+ +L++Y + G F + R VF+
Sbjct: 121 YASLLQTCTKVLAFNHGL-QIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDG 179
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
+ W S++ V G N+L+L+ KM GV + FT VI+AC +G
Sbjct: 180 LFV---KDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDL 236
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
+ G+I H VL GF N I + LI M+ + + D+ +LFD++
Sbjct: 237 KL----GRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL----------- 281
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRG 267
LEP+ + WTS++S+ R +E + F M R G
Sbjct: 282 ------------------------LEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHG 317
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
+ VL+ C +L GK +H VI GF V V+++L+ +YGK
Sbjct: 318 MCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGK-------- 369
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
G E+ +F + M N +SWSA++G +
Sbjct: 370 -----------------------CGSVGESQRIFDR--------MPIKNSVSWSALLGGY 398
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
NG + + +FRKM+ + +L CA AA+ G+E+H +R +++
Sbjct: 399 CQNGDFKSVIQIFRKMEKVDLYC----FGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDV 454
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
+V++ L+++Y KCGC+E +F+Q+ ++LITWNSMI G+ NG GE AL F +M++
Sbjct: 455 IVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKE 514
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
G KPD ++F+ +L ACSH GLV+EGR F M +++ I+ +EHY+CMVDLLGRAGLL+E
Sbjct: 515 GIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEE 574
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A +++ ++ +W LL +C N ++AE +A ++ L + SY+LL+N+Y A
Sbjct: 575 AEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKA 634
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI-HMFSSGNSLQSDLKNVCEVLEELAL 686
GRW DA ++R K +G+ K+ G+SWIE K + F NSL N +V EEL +
Sbjct: 635 VGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNLGSSFDFENSLVPGESNFLDV-EELQM 693
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 153/343 (44%), Gaps = 45/343 (13%)
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ G L + L + I A +L C + A + G IH VIK G E F
Sbjct: 95 KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRF 154
Query: 309 VKNALICVYGKHG-DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
V N+L+ +Y K G D + +F + K+++SW ++I+ Y G ++E+F
Sbjct: 155 VGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELF------ 208
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
W KM V N+ T+S ++ C+E
Sbjct: 209 ------------W---------------------KMLAYGVEPNAFTLSAVIKACSELGD 235
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L +GR HG V+ + N ++ + L++M+ + L++ +F+++ + D I W S+IS
Sbjct: 236 LKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISA 295
Query: 488 YGMNGLGENALATFEEMI-EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRI 545
N + AL F M + G PDG F VL+AC + G + +G+ + ++ F
Sbjct: 296 LTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCG 355
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+E + +VD+ G+ G + E+ I MP++ N+ W LL
Sbjct: 356 NVVVE--SSLVDMYGKCGSVGESQRIFDRMPIK-NSVSWSALL 395
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
AL L + + ++ A V + LL C + A N G +IH HV++ + + V N LL
Sbjct: 102 ALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLT 161
Query: 456 MYMKCGC-LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+Y K G E VF+ + KD+I+W SMISGY G N+L F +M+ G +P+
Sbjct: 162 LYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAF 221
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
AV+ ACS G + G RIF +V + + ++D+ GR L +A +
Sbjct: 222 TLSAVIKACSELGDLKLG-RIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDE 280
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+ +EP+A W +++++ + +N EA+
Sbjct: 281 L-LEPDAICWTSIISA--LTRNDFFDEAL 306
>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 195/573 (34%), Positives = 305/573 (53%), Gaps = 76/573 (13%)
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
TF +I +C S S+G VH ++ GF + + +LI MY ++G + + K+
Sbjct: 80 TFEHLIYSCAQKNSL----SYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FD+ R + WN +F A+ L+L+ +M G + T+T +L +
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKA------- 188
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
+ LSVC GK IH +++ G+E + V L
Sbjct: 189 --------------------CVVSELSVCPL----RKGKEIHAHILRHGYEANIHVMTTL 224
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ VY K G V SYA + C +M
Sbjct: 225 LDVYAKFGSV-----------------------SYANSVFC----------------AMP 245
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKM--QLAKVVANSVTISGLLSVCAESAALNIG 431
N +SWSA+I FA N +AL+LF+ M + V NSVT+ +L CA AAL G
Sbjct: 246 TKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQG 305
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
+ IHG+++R ++ + V N L+ MY +CG + G VF+ ++K+D+++WNS+IS YGM+
Sbjct: 306 KLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMH 365
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G G+ A+ FE MI G P ++F+ VL ACSHAGLV EG+ +F+ M+ ++RI P MEH
Sbjct: 366 GFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEH 425
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
YACMVDLLGRA L EA ++++M EP VWG+LL SCR+H N ++AE ++ +F L
Sbjct: 426 YACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELE 485
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
G+Y+LL++IYA + W +A V + +GL+K+ G SWIEVKRK++ F S +
Sbjct: 486 PRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHN 545
Query: 672 SDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
++ + +L +L+ +M+ +G VP +++L+++
Sbjct: 546 PQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDL 578
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 189/381 (49%), Gaps = 47/381 (12%)
Query: 28 NSLLDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
N F+HL+ C + L VH L+ +G + FLA +++++Y G + A
Sbjct: 75 NPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALK 134
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
VF+ + + +WN++ R G + L LY++M +G D FT+ V++AC
Sbjct: 135 VFDETR---ERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVV 191
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
G+ +H H+L+ G++ N+H++ L+ +YAK G +S + +F + KN++S
Sbjct: 192 SELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVS 251
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLE--PNFVTWTSLLSSHARCGRLEETMDLFDM 262
W+ M + FA N ALELF+ M E PN VT ++L +
Sbjct: 252 WSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQA---------------- 295
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
CA LAA GK+IHG++++ + + V NALI +YG+ G+
Sbjct: 296 -------------------CAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGE 336
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
V + Q +F ++++++VSWN+LI+ Y G +A+++F + G S P+ IS+
Sbjct: 337 VLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKAIQIFENMIH-QGVS---PSYISFIT 392
Query: 383 VIGAFASNGRGEEALDLFRKM 403
V+GA + G EE LF M
Sbjct: 393 VLGACSHAGLVEEGKILFESM 413
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 177/363 (48%), Gaps = 22/363 (6%)
Query: 20 PFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRL 79
P TY L C L C + + K++H ++ G A+ + +L +YA+FG +
Sbjct: 176 PSDRFTYTYVLKACVVSELSVC-PLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSV 234
Query: 80 FDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM--RKLGVLGDGFTFPL 137
A +VF P + + W++++ N + AL+L+ M + + T
Sbjct: 235 SYANSVFCAMP---TKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVN 291
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
+++AC + + G+++H ++L+ + ++N LI MY + G++ ++FD +
Sbjct: 292 MLQACAGLAALEQ----GKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNM 347
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
+ ++ +SWN + S + ++ A+++F+ M +G+ P+++++ ++L + + G +EE
Sbjct: 348 KKRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGK 407
Query: 258 DLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
LF+ M+ K I G E A ++ + A+ +G+ I + FE V +L+
Sbjct: 408 ILFESMLSKYRIHPGMEHYACMVDLLGR--ANRLGEAI-KLIEDMHFEPGPTVWGSLLGS 464
Query: 317 YGKHGDVKVAQ---NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE-----KLD 368
H +V++A+ + E+E +N ++ L YAEA L EA V LE KL
Sbjct: 465 CRIHCNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLP 524
Query: 369 GGS 371
G S
Sbjct: 525 GCS 527
>gi|356545955|ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Glycine max]
Length = 667
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 206/684 (30%), Positives = 348/684 (50%), Gaps = 60/684 (8%)
Query: 15 SNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA 74
S P F+ Y ++L C DH L + Q KQ+H +LI+ FLA++++ Y+
Sbjct: 28 SPPGVDFA--AYGSALQHCSDHRL-----LRQGKQLHARLILLSVTPDNFLASKLILFYS 80
Query: 75 RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR---KLGVLGD 131
+ AR VF+T P ++ WN++L N ++ +AL L+ D
Sbjct: 81 KSNHAHFARKVFDTTP---HRNTFTWNAMLLGYSFNSMFRHALNLFGSFTFSTTPNASPD 137
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
FT V++A + S + VH +L+ G ++ ++N LI Y + ++ +
Sbjct: 138 NFTISCVLKA---LASSFCSPELAKEVHCLILRRGLYSDIFVLNALITCYCRCDEVWLAR 194
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARC 250
+FD + ++ ++WN M G++ D L+ M + + PN VT S++ + C
Sbjct: 195 HVFDGMSERDIVTWNAMIGGYSQRRLYDECKRLYLEMLNVSAVAPNVVTAVSVMQA---C 251
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
G ++MDL G +H FV + G E V +
Sbjct: 252 G---QSMDL-----------------------------AFGMELHRFVKESGIEIDVSLS 279
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
NA++ +Y K G + A+ +F + EK+ V++ A+I+ Y + GL D+A+ VF
Sbjct: 280 NAVVAMYAKCGRLDYAREMFEGMREKDEVTYGAIISGYMDYGLVDDAMGVFR-------- 331
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
+E P + W+AVI N + E DL R+MQ + + N+VT++ +L + + L
Sbjct: 332 GVENPGLNMWNAVISGMVQNKQFEGVFDLVRQMQGSGLSPNAVTLASILPSFSYFSNLRG 391
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
G+E+HG+ +R +N+ V +++ Y K GC+ VF+ + + LI W S+IS Y
Sbjct: 392 GKEVHGYAIRRGYEQNVYVSTSIIDAYGKLGCICGARWVFDLSQSRSLIIWTSIISAYAA 451
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
+G AL + +M++ G +PD V +VL+AC+H+GLV+E IF+ M ++ I+P +E
Sbjct: 452 HGDAGLALGLYAQMLDKGIRPDPVTLTSVLTACAHSGLVDEAWNIFNSMPSKYGIQPLVE 511
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL 610
HYACMV +L RAG L EA + MP+EP+A VWG LL+ + + ++ + +F +
Sbjct: 512 HYACMVGVLSRAGKLSEAVQFISEMPIEPSAKVWGPLLHGASVFGDVEIGKFACDHLFEI 571
Query: 611 ITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSL 670
E TG+Y++++N+YA +G+WE A +VR K GL+K+ G SWIE + F + +
Sbjct: 572 EPENTGNYIIMANLYAHAGKWEQAGEVRERMKVIGLQKIRGSSWIETSGGLLSFIAKDVS 631
Query: 671 QSDLKNVCEVLEELALQMENKGCV 694
+ +LE L M +GCV
Sbjct: 632 NGRSDEIYALLEGLLGLMREEGCV 655
>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 214/713 (30%), Positives = 333/713 (46%), Gaps = 119/713 (16%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP-FDCKSSSLLWN 101
TI + + H L+ +G + + + L AR +F+ P D S WN
Sbjct: 15 TIAAVAKSHATLLKSGVTSPTPWNQLLTAYSVSSPGLAAARRLFDEIPRLDAAS----WN 70
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
S+L +VS G + A +L M + G+ + F +R+ MG + G +H+
Sbjct: 71 SLLAAHVSIGAHPAACRLLRAMHERGLAANTFALGSALRSAAAMGCS----ALGTQLHSL 126
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
++ G NV L+ MYAK G+ D+ +LFD + +N +SWN + +G+ + A
Sbjct: 127 AVKAGLADNVFSATALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPA 186
Query: 222 LELFKRMELEGLEPNFVTWTSLL----------------------------------SSH 247
++LF ME EG P+ T+ +LL +++
Sbjct: 187 VQLFVEMEREGFLPDEATFAALLTVVNDSTCFLMHQLHGKIVKYGSALGLIVLNAAITAY 246
Query: 248 ARCGRLEETMDLFD---------------------------------MMRKRGIEVGAEA 274
++CG L + +FD MMR G++ +
Sbjct: 247 SQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYS 306
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD---VKVAQNLFS 331
++S CA+ DH G VIHG V K GFE V NALI +Y + + ++ A F
Sbjct: 307 FTSIISACAE-HRDHGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFD 365
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+ K+ VSWN+++T Y++ GL
Sbjct: 366 SLLLKDTVSWNSMLTGYSQHGL-------------------------------------- 387
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
+AL FR MQ + + S L C++ A L +GR+IHG V+R N V +
Sbjct: 388 -SADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLGRQIHGLVIRSGFASNNFVSS 446
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L+ MY K G L++ FE+ +K + WNSM+ GY +G + + F +M+E
Sbjct: 447 SLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQHGKAQAVRSLFNQMLELKVPL 506
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D + FV +++ACSHAGLV+EG I + M + I +MEHYAC +DL GRAG L +A ++
Sbjct: 507 DHITFVGLITACSHAGLVDEGSEILNTMESRYGIPLRMEHYACGIDLYGRAGQLDKAKEL 566
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
+ +MP EP+A VW TLL +CR+H N ++A +AS + +Y+LLSN+Y+ G W
Sbjct: 567 IDSMPFEPDAMVWMTLLGACRVHGNMELASDVASHLLEAEPRQHSTYVLLSNMYSGLGMW 626
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
D A V+ K KGL KV G SWIEVK ++H F++ + + + E+L L
Sbjct: 627 SDRAIVQKEMKNKGLSKVPGWSWIEVKNEVHSFNAEDGSHPRMDEIYEMLSLL 679
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 339 bits (870), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 193/661 (29%), Positives = 339/661 (51%), Gaps = 53/661 (8%)
Query: 31 LDCFDHLLQQCKTIHQLKQVHNQLIVTGANASA---FLAARVLSIYARFGRLFDARNVFE 87
L LL+QC++I +L Q+H L+V G+ ++A LA+ A G L AR +F+
Sbjct: 11 LPSLQKLLRQCRSIQRLNQLHAHLLVHGSLSAASDLLLASYCALAKAGHGVLCHARRLFD 70
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
P +++N+I+R ++ AL+L+ M + G+L + FT P V++AC +
Sbjct: 71 GIP---GPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACTIAQA 127
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
+ VH L++G G V + N L+ YA G + DS + FD
Sbjct: 128 REHALA----VHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFD------------ 171
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
E ++ N V+W S++ +A+ G E LF MR++G
Sbjct: 172 -----------------------EMVDRNVVSWNSMIGGYAQAGDTREVCSLFGEMRRQG 208
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
+ +L C+ +G+++H ++ G + +++AL+ +YGK GD+ +A+
Sbjct: 209 FLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMAR 268
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
F + K++VSW +++ + + G + A F M N++SW+A+I +
Sbjct: 269 RCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDH--------MPERNIVSWNAMISCY 320
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
G+ EALDL+ +MQ + + +T+ +LS L +G+ +H ++ N ++
Sbjct: 321 VQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDNIYNPDV 380
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
+ N LL+MY KCG ++ +F ++ +++++WN +I G M+G + + F M+
Sbjct: 381 SLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAMHGRALDTITFFRSMVTD 440
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
F PDG+ FVA+LSACSH GL+ G+ F+ M + ++ ++EHYACMVDLLGR G L++
Sbjct: 441 SFAPDGITFVALLSACSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEK 500
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A ++K MPM+P+ VWG LL +CR+H N + + Q+ L + G ++L+SN+
Sbjct: 501 AVCLIKEMPMKPDVVVWGALLGACRIHGNVKIGRQVIKQLLELEGISGGLFVLISNLLYE 560
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
+ +WED ++R K G +K G S IE+ IH F + + V+++L+
Sbjct: 561 THQWEDMKRLRKLMKEWGTRKDMGVSSIEINNSIHEFGVEDIRHERSSEIYAVVDQLSYH 620
Query: 688 M 688
+
Sbjct: 621 L 621
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 156/348 (44%), Gaps = 23/348 (6%)
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
P+ + ++ +I A+ ++ EAL L R M ++ N T+ ++ C + A +
Sbjct: 75 PDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKACTIAQAREHALAV 134
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
HG +R+ + + V N LL+ Y G L + F+++ +++++WNSMI GY G
Sbjct: 135 HGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDT 194
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF-DMMVREFRIEPQMEHYA 553
+ F EM GF D V++L ACS G + GR + M+V R++ +E +
Sbjct: 195 REVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILE--S 252
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
+VD+ G+ G L A + MP++ + W ++L + H + + A +
Sbjct: 253 ALVDMYGKCGDLWMARRCFEMMPIK-SVVSWTSMLCAQTKHGSVNAARCWFDH---MPER 308
Query: 614 TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK-----VAGQSW------IEVKRKIH 662
S+ + + Y G+ +A + +++GL VA S + V + +H
Sbjct: 309 NIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVH 368
Query: 663 MFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNV 710
++ N D+ V +L+ M K D I L+ M +NV
Sbjct: 369 LYIRDNIYNPDVSLVNSLLD-----MYAKCGQVDTAISLFSEMCNRNV 411
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 193/607 (31%), Positives = 326/607 (53%), Gaps = 65/607 (10%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
W+SI++ S+ L + + MR L V + FP +++A + + S +H
Sbjct: 78 WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHS----LH 133
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+++G +++I N LI YAK F +F K R ++ I DC
Sbjct: 134 ACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPK-RGESGI-------------DC- 178
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG-IEVGAEAIAVV 278
++F M + + V+W ++++ A+ G E +D+ M K G ++ + ++ +
Sbjct: 179 -VKKVFDMMPVR----DVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSI 233
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
L + A+ + GK IHG+ ++ GF+ VF+ ++LI +Y K ++ + F
Sbjct: 234 LPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFY------- 286
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
+ R + ISW+++I NG + L
Sbjct: 287 --------------------------------ILPRKDAISWNSIIAGCVQNGEFDRGLG 314
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
FR+M V +V+ S ++ CA AL++GR++HG +VR+ + N + + L++MY
Sbjct: 315 FFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYA 374
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
KCG ++ VF++I+K+D++ W ++I G M+G +A++ FE M+E G +P VAF+A
Sbjct: 375 KCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMA 434
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP-M 577
VL+ACSHAGLV+EG R F+ M R+F I P +EHYA + DLLGRAG L+EA D + NM +
Sbjct: 435 VLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGV 494
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
+P VW LL +CR HK+ ++AE + ++ + +E G+Y+L+SNIY+A+ RW+DAA++
Sbjct: 495 QPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARL 554
Query: 638 RISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
RI + KGLKK SWIEV ++H F +G+ + + L+ L QME +G V D
Sbjct: 555 RIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDT 614
Query: 698 DIILWEM 704
+ +L ++
Sbjct: 615 NQVLHDV 621
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 122/236 (51%), Gaps = 8/236 (3%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
+++ K++H + G + F+ + ++ +YA+ RL + F P + ++ WNSI
Sbjct: 243 VNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILP---RKDAISWNSI 299
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
+ V NG ++ L + +M K V +F VI AC + + S G+ +H ++
Sbjct: 300 IAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTAL----SLGRQLHGCIV 355
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
++GF N I + L+ MYAK G + + +FD++ ++ ++W + G A++ A+
Sbjct: 356 RLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVS 415
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM-RKRGIEVGAEAIAVV 278
LF+ M +G+ P +V + ++L++ + G ++E F+ M R GI G E A V
Sbjct: 416 LFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAV 471
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 174/548 (31%), Positives = 299/548 (54%), Gaps = 44/548 (8%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ VH H+ GF + I+N L+ MYAK + DS KLFD++ ++ SWN++ SG+A
Sbjct: 89 GKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAK 148
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE- 273
A LF +M E + +WT+++S + R R E ++LF MM++ +
Sbjct: 149 MGLLQEAKSLFDKMP----ERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKF 204
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
++ L+ A + +GK IHG++++ G +
Sbjct: 205 TVSSALAAAAAVPCLRIGKEIHGYIMRTGLD----------------------------- 235
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
+ V W+AL Y + G +EA +F ++ D +++W+A+I + +GR
Sbjct: 236 --SDEVVWSALSDMYGKCGSIEEARHIFDKMVDRD--------IVTWTAMIDRYFQDGRR 285
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
+E DLF + + + N T SG+L+ CA + +G+++HG++ RV + + L
Sbjct: 286 KEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASAL 345
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY KCG + VF++ + DL +W S+I+GY NG + A+ FE ++++G +PD
Sbjct: 346 VHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDH 405
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
+ FV VLSAC+HAGLV++G F + ++ + +HYAC++DLL R+G EA +I+
Sbjct: 406 ITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIIS 465
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
M M+P+ ++W +LL CR+H N +A+ A +F + E +Y+ L+NIYA +G W +
Sbjct: 466 KMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSE 525
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
AK+R + +G+ K G SWI +KR +H+F G+ K + E L +L+ +M+ +G
Sbjct: 526 VAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGF 585
Query: 694 VPDNDIIL 701
VPD + +L
Sbjct: 586 VPDTNFVL 593
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 176/338 (52%), Gaps = 15/338 (4%)
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
RL+E + + + K A + ++ C GK +H + GF +F+ N
Sbjct: 54 RLKEALQILHQIDK----PSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILN 109
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
L+ +Y K + +Q LF E+ E+++ SWN LI+ YA+ GL EA +F ++ + D
Sbjct: 110 RLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDN-- 167
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK-VVANSVTISGLLSVCAESAALNI 430
SW+A+I + + R EAL+LFR M+ + +N T+S L+ A L I
Sbjct: 168 ------FSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRI 221
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
G+EIHG+++R ++ + +V + L +MY KCG +EE +F+++ +D++TW +MI Y
Sbjct: 222 GKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQ 281
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
+G + F +++ +G +P+ F VL+AC++ G+++ M R +P
Sbjct: 282 DGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTR-VGFDPFSF 340
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ +V + + G + A + K P +P+ + W +L+
Sbjct: 341 AASALVHMYSKCGNMVSAERVFKETP-QPDLFSWTSLI 377
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 115/531 (21%), Positives = 230/531 (43%), Gaps = 99/531 (18%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ L+Q C + + Q K+VH + ++G F+ R+L +YA+ L D++ +F+ P
Sbjct: 73 YSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMP 132
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVI-------RACK 143
+ WN ++ GL + A L+ KM + D F++ +I R +
Sbjct: 133 ---ERDLCSWNILISGYAKMGLLQEAKSLFDKMPER----DNFSWTAMISGYVRHDRPNE 185
Query: 144 FMGSFRF----------RFS---------------FGQIVHNHVLQMGFQGNVHIVNELI 178
+ FR +F+ G+ +H ++++ G + + + L
Sbjct: 186 ALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALS 245
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
MY K G + ++ +FDK+ ++ ++W M + + +LF + G+ PN
Sbjct: 246 DMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEF 305
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
T++ VL+ CA+ ++ +GK +HG++
Sbjct: 306 TFSG-----------------------------------VLNACANQTSEELGKKVHGYM 330
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
+ GF+ + F +AL+ +Y K G++ A+ +F E + ++ SW +LI YA+ G DEA+
Sbjct: 331 TRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAI 390
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT-ISG 417
F L K S +P+ I++ V+ A A G ++ LD F ++ + ++ +
Sbjct: 391 RYFELLVK----SGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYAC 446
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ----- 472
++ + A S + I + ++SM + + LL GC G+L Q
Sbjct: 447 IIDLLARSGQFDEAENI---ISKMSMKPDKFLWASLLG-----GCRIHGNLKLAQRAAEA 498
Query: 473 ---IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG-FKPDGVAFVAV 519
IE ++ T+ ++ + Y G+ + M + G K G++++A+
Sbjct: 499 LFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAI 549
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 210/736 (28%), Positives = 365/736 (49%), Gaps = 117/736 (15%)
Query: 31 LDCFDHLLQ--QCKTIHQLKQVHNQLIVTGANASA-FLAARVLSIYARFGRLFDARNVFE 87
L F+ L+Q K++ + + +H Q+I +++S +LA +++ YA+ L A+ VF+
Sbjct: 8 LSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFD 67
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENA--LKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
+ WN ++ G ++ ++L+ +MR +L + TF + A +
Sbjct: 68 RIH---NKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNL 124
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
S FGQ H ++M +V + + L+ MY K G + ++ ++FD++ +N ++W
Sbjct: 125 SSI----FFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTW 180
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS------------------- 246
M SG+A+ A E+F+ M E + N +TS+LS+
Sbjct: 181 ATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVK 240
Query: 247 ----------------HARCGRLEETMDLFDM---------------------------- 262
+A+CG L++++ +F+M
Sbjct: 241 TGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKL 300
Query: 263 ---MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
M GI + VL+ C+D A GK +H +++K GFE +++ AL+ +Y K
Sbjct: 301 FSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAK 360
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
G + A+ F+ +++ ++V W ++I Y + G
Sbjct: 361 SGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNG--------------------------- 393
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVV 439
E+AL L+ +MQ+ ++ N +T++ +L C+ AA + GR+IH +
Sbjct: 394 ------------ENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTI 441
Query: 440 RVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
+ + + + + L MY KCG LEEG++VF ++ ++D+I+WN+MISG NG G+ AL
Sbjct: 442 KYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALE 501
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
FEEM + KPD V FV VLSACSH GLV+ G F MM EF + P++EHYACMVD+L
Sbjct: 502 LFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVL 561
Query: 560 GRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYM 619
RAG L EA + +++ ++ +W LL +CR ++N ++ ++ L ++ + +Y+
Sbjct: 562 SRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYV 621
Query: 620 LLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCE 679
LLS IY A GR ED +VR K +G+ K G SWIE+K +H+F G+ + + +
Sbjct: 622 LLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVGDQMHPCIGEIRT 681
Query: 680 VLEELALQMENKGCVP 695
+ L+ QM+++G P
Sbjct: 682 EILRLSKQMKDEGYQP 697
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 129/253 (50%), Gaps = 16/253 (6%)
Query: 11 QFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVL 70
F+ NPS F+++ N+ D C + + KQVHN L+ G + ++ ++
Sbjct: 305 HFAGINPSE-FTLVGVLNACSDA-------C-AVEEGKQVHNYLLKLGFESQLYIMTALV 355
Query: 71 SIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG 130
+YA+ G DAR F + + +LW S++ V NG E+AL LY +M+ G+L
Sbjct: 356 DMYAKSGVTEDARKGFN---YLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILP 412
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
+ T V++AC + +F G+ +H ++ G V I + L MYAK G + +
Sbjct: 413 NELTMASVLKACSNLAAF----DQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEG 468
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
+F ++ ++ ISWN M SG + N ALELF+ M + +P+ VT+ ++LS+ +
Sbjct: 469 NIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHM 528
Query: 251 GRLEETMDLFDMM 263
G ++ F MM
Sbjct: 529 GLVDSGWLYFRMM 541
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 191/558 (34%), Positives = 297/558 (53%), Gaps = 50/558 (8%)
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
GQ H ++ G Q N + +++ MYA G + + +FD++ + + +N + +
Sbjct: 95 LGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYT 154
Query: 214 LN---FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
+ LE + RM GL + T
Sbjct: 155 RHGXXXXXXXXLEAYARMHFLGLLGDNFT------------------------------- 183
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+ VL CADL+ MG+ +HG ++ G E +V +LI +Y K G + A+ LF
Sbjct: 184 ----LPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLF 239
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
++ +++ SWNALI Y + G A ++F + ME N++SW+A+I + N
Sbjct: 240 DKMIVRDMASWNALIAGYMKEGEIGVAEDLFER--------MEHRNIVSWTAMISGYTQN 291
Query: 391 GRGEEALDLFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
G E+AL LF +M +++ N VTI +L CA+SAAL GR IH + ++ N
Sbjct: 292 GFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSS 351
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEK--KDLITWNSMISGYGMNGLGENALATFEEMIE 506
VQ L MY KC L E F+ I + K+LI WN+MI+ Y +G G A++ FE M+
Sbjct: 352 VQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLR 411
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
AG +PD V F+ +LS CSH+GL++ G F+ M +EP++EHYAC+VDLLGRAG L
Sbjct: 412 AGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLV 471
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
EA +++ MPM+ VWG LL +CR H+N ++AE A ++F L + +G+Y+LLSN+YA
Sbjct: 472 EAKELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYA 531
Query: 627 ASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELAL 686
+G WE+ K+R K +G+KK G SWIE+ K H+F + K + + LE L
Sbjct: 532 EAGMWEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPE 591
Query: 687 QMENKGCVPDNDIILWEM 704
+++ G +PD +L ++
Sbjct: 592 KIKMAGYIPDTSFVLHDI 609
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 132/406 (32%), Positives = 210/406 (51%), Gaps = 39/406 (9%)
Query: 5 LLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAF 64
L H PH PS+ + F +T +N F L QQ H Q+++ G +AF
Sbjct: 71 LQHFPH---PSSYAPIFQFLTRHN-----FIKLGQQ---------AHAQIVLHGLQPNAF 113
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENA---LKLYV 121
LAA+++++YA G L A VF+ SSLL+NSI+R +G L+ Y
Sbjct: 114 LAAKMVAMYASSGDLDSAVVVFDRID---NPSSLLYNSIIRAYTRHGXXXXXXXXLEAYA 170
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
+M LG+LGD FT P V+++C + R G+ VH L++G +G+ ++ LI MY
Sbjct: 171 RMHFLGLLGDNFTLPFVLKSCADLS----RVCMGRCVHGQGLRVGLEGDFYVGASLIDMY 226
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
K G + D+ KLFDK+ V++ SWN + +G+ + A +LF+RME N V+WT
Sbjct: 227 VKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERME----HRNIVSWT 282
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV--VLSVCADLAADHMGKVIHGFVI 299
+++S + + G E+ + LFD M + G E+ + + VL CA AA G+ IH F
Sbjct: 283 AMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFAN 342
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE--KNIVSWNALITSYAEAGLCDEA 357
G V+ AL +Y K + A+ F I + KN+++WN +IT+YA G EA
Sbjct: 343 GIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEA 402
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
V +F + L G +P+ +++ ++ + +G + L+ F M
Sbjct: 403 VSIFENM--LRAGV--QPDAVTFMGLLSGCSHSGLIDAGLNHFNDM 444
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 213/689 (30%), Positives = 348/689 (50%), Gaps = 97/689 (14%)
Query: 23 IITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTG-ANASAFLAARVLSIYARFGR--- 78
+ T +S+L CF +C T L Q + LI +G A+ + FL+ + S G
Sbjct: 4 LATLRHSILCCF----HKCGTFDHLNQTTSILITSGLAHHTFFLSDLLRSATKDLGYTLL 59
Query: 79 LFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLV 138
LFD P+ LWN+I+R ++ + L Y ++R GV+ D TFPL+
Sbjct: 60 LFDRL----ATPY-----IFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLL 110
Query: 139 IRA-CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
++A K F+F + H+++ G + + N L+ +A G +
Sbjct: 111 LKAFSKLRNENPFQF------YAHIVKFGLDFDAFVQNSLVSAFAHCGYV---------- 154
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
DC +R+ +E + + V+WT+L++ R GR E +
Sbjct: 155 -------------------DCS------RRLFIETAKKDVVSWTALINGCLRNGRAVEAL 189
Query: 258 DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
+ F MR G+EV + VL A L G+ +HGF ++ G +
Sbjct: 190 ECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIW----------- 238
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
DV V +AL+ Y++ G CD+AV+VF++ M N+
Sbjct: 239 ----DVYVG---------------SALVDMYSKCGYCDDAVKVFNE--------MPTRNL 271
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
+SW A+I + R +EAL +F++M + + N T++ L+ CA+ +L+ GR +H +
Sbjct: 272 VSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEY 331
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
V R + N + L++MY KCGC++E LVFE++ KD+ W +MI+G M G ++
Sbjct: 332 VDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSS 391
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
L F +MI + +P+GV F+ VLSAC+H GLV+EG +F +M+ ++R+EP ++HY CMVD
Sbjct: 392 LNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVD 451
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
LLGRAG L+EA +++MPMEP VWG L + C +HK ++ E + + + L +G
Sbjct: 452 LLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGR 511
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
Y+LL+N+Y+ +WE AA VR K KG+ K SWIEV IH F + + + NV
Sbjct: 512 YILLANLYSRCQKWEAAANVRRLMKGKGVDKSPACSWIEVNGVIHEFIAFDKSHIESINV 571
Query: 678 CEVLEELALQMENKGCVPDNDIILWEMMG 706
+L + Q++ D++++ + + G
Sbjct: 572 YMMLGSVTAQLKLATYALDSNLLTFTIDG 600
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 195/594 (32%), Positives = 307/594 (51%), Gaps = 83/594 (13%)
Query: 115 NALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIV 174
+A+ + M + GV D T+ +I+ C G+ R G+ VH H+ G+ +
Sbjct: 268 SAMHVLDSMERRGVWADSITYSELIKCCLAHGAVRE----GKRVHRHIFSNGYHPKTFLT 323
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N LI MY K + ++ LFDK+ +N +SW M S ++ D A+ L M +G+
Sbjct: 324 NILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVM 383
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
PN T++S+L + C RL +D+ K +
Sbjct: 384 PNMFTFSSVLRA---CERL------YDL-----------------------------KQL 405
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
H +++K G E VFV++ALI VY K G++
Sbjct: 406 HSWIMKVGLESDVFVRSALIDVYSKMGELL------------------------------ 435
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
EA++VF ++ D + W+++I AFA + G+EAL L++ M+ A+ T
Sbjct: 436 -EALKVFREMMTGDS--------VVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQST 486
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
++ +L C + L +GR+ H HV++ ++++++ N LL+MY KCG LE+ +F ++
Sbjct: 487 LTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMA 544
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
KKD+I+W++MI+G NG AL FE M G KP+ + + VL ACSHAGLVNEG
Sbjct: 545 KKDVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWY 604
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F M + I+P EHY CM+DLLGRA L + ++ M EP+ W TLL++CR
Sbjct: 605 YFRSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRAR 664
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
+N D+A A +I L + TG+Y+LLSNIYA S RW D A+VR + K +G++K G SW
Sbjct: 665 QNVDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSW 724
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKK 708
IEV ++IH F G+ + + L + ++ G VPD + +L ++ G++
Sbjct: 725 IEVNKQIHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQ 778
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 184/380 (48%), Gaps = 56/380 (14%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
ITY+ + C H + + K+VH + G + FL ++++Y +F L +A+
Sbjct: 286 ITYSELIKCCLAH-----GAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQ 340
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
+F+ P + + + W +++ + L + A++L M + GV+ + FTF V+RAC+
Sbjct: 341 VLFDKMP---ERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACE 397
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
+ + Q+ H+ ++++G + +V + + LI +Y+KMG++ ++ K+F ++ + +
Sbjct: 398 RL------YDLKQL-HSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSV 450
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
WN + + FA + D D AL L+K M
Sbjct: 451 VWNSIIAAFAQHSDGDEALHLYKSM----------------------------------- 475
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
R+ G + VL C L+ +G+ H V+K F+ + + NAL+ +Y K G +
Sbjct: 476 RRVGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSL 533
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
+ A+ +F+ + +K+++SW+ +I A+ G EA+ +F + K+ G +PN I+ V
Sbjct: 534 EDAKFIFNRMAKKDVISWSTMIAGLAQNGFSMEALNLFESM-KVQG---PKPNHITILGV 589
Query: 384 IGAFASNGRGEEALDLFRKM 403
+ A + G E FR M
Sbjct: 590 LFACSHAGLVNEGWYYFRSM 609
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 135/264 (51%), Gaps = 11/264 (4%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F +L+ C+ ++ LKQ+H+ ++ G + F+ + ++ +Y++ G L +A VF
Sbjct: 389 FSSVLRACERLYDLKQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREM---M 445
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
S++WNSI+ + + AL LY MR++G D T V+RAC +
Sbjct: 446 TGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLS----LLE 501
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ H HVL+ F ++ + N L+ MY K G + D+ +F+++ K+ ISW+ M +G A
Sbjct: 502 LGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAGLA 559
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK-RGIEVGA 272
N AL LF+ M+++G +PN +T +L + + G + E F M GI+ G
Sbjct: 560 QNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYFRSMNNLYGIDPGR 619
Query: 273 EAIAVVLSVCADLAA-DHMGKVIH 295
E +L + D M K+IH
Sbjct: 620 EHYGCMLDLLGRAEKLDDMVKLIH 643
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 216/731 (29%), Positives = 361/731 (49%), Gaps = 120/731 (16%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + + ++H + G F+ ++++YA+ G L AR +F++
Sbjct: 151 FPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGL 210
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ K + WNSI+ +V G AL L+ +M+++GV + +TF ++AC+ +
Sbjct: 211 ME-KDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKI 269
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ------------------------ 186
G+ +H +L+ +V++ N LI MYA GQ
Sbjct: 270 ----GRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLS 325
Query: 187 -----------------MSDSFKLFDKVRVKNYISWN---------MMFSGFALNFDCDG 220
M DS + D+V V N I+ + M +A+ D
Sbjct: 326 GMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDS 385
Query: 221 ALELFKRM-ELEG---------------LEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
+ + + ++ G E + ++WT++++ +A+ E +D +++R
Sbjct: 386 NMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQN---ECHLDALNLLR 442
Query: 265 KRGIE---VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
K +E V I +L C+ L ++ + K IHG+V+KGG D + ++NA++ VYG
Sbjct: 443 KVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLAD-ILIQNAIVNVYG--- 498
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
E L D A VF + D ++SW+
Sbjct: 499 ----------------------------ELALVDYARHVFESINSKD--------IVSWT 522
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
++I NG EAL+LF + + + +T+ +L A ++L G+EIHG ++R
Sbjct: 523 SMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRK 582
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
L+ N L++MY +CG +E +F ++++DLI W SMI+ GM+G G++A+ F
Sbjct: 583 GFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLF 642
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
+M + PD + F+A+L ACSH+GLV EG++ F++M E+++EP EHYAC+VDLL R
Sbjct: 643 SKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLAR 702
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLL 621
+ L+EA V+NMP+EP+A VW LL +CR+H N D+ E A ++ L TE +G+Y+L+
Sbjct: 703 SNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLV 762
Query: 622 SNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVL 681
SN +AA GRW D +VR K LKK G SWIEV+ KIH F + + N+ L
Sbjct: 763 SNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKL 822
Query: 682 EELALQMENKG 692
+ ++ KG
Sbjct: 823 AQFTKLLKEKG 833
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 166/642 (25%), Positives = 285/642 (44%), Gaps = 131/642 (20%)
Query: 26 YNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGAN-ASAFLAARVLSIYARFGRLFDARN 84
Y+ +L C H K + Q +Q+H + T S FL + + +Y + G +DA
Sbjct: 49 YSQALELCASH-----KALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVK 103
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
VF+ + + WN+++ VS G Y A++LY +MR LGV D FTFP V++AC
Sbjct: 104 VFDKMS---ERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKAC-- 158
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK--VRVKNY 202
G+F+ R G +H ++ G+ G V + N LI MYAK G + + LFD + +
Sbjct: 159 -GAFKER-RLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDP 216
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
+SWN + S + AL LF+RM+ G+E N T+ S
Sbjct: 217 VSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVS-------------------- 256
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
L C +G+ IH ++K V+V NALI +Y G
Sbjct: 257 ---------------ALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQ 301
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
++ A+ +F + K+ VSWN L++ + + +A+ F ++ D G ++P+ +S
Sbjct: 302 MEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQ--DSG--QKPDQVS--- 354
Query: 383 VIGAFASNGR-------------------------GEEALDLFRK-------------MQ 404
V+ A++GR G +D++ K M
Sbjct: 355 VLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP 414
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGRE------------------------------- 433
+++ + I+G ALN+ R+
Sbjct: 415 EKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKE 474
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
IHG+V++ + +IL+QN ++N+Y + ++ VFE I KD+++W SMI+ NGL
Sbjct: 475 IHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGL 533
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHY 552
AL F +IE +PD + V+VL A + + +G+ I ++R+ F +E + +
Sbjct: 534 AIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIAN- 592
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+VD+ R G ++ A +I N + + +W +++N+ MH
Sbjct: 593 -SLVDMYARCGTMENARNIF-NYVKQRDLILWTSMINANGMH 632
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 140/320 (43%), Gaps = 44/320 (13%)
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKG-GFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
+A + L +CA A G+ +H +K + D VF+ + +YGK G A +F
Sbjct: 47 QAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFD 106
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
++ E+ I +WNA+I + AG EA+E
Sbjct: 107 KMSERTIFTWNAMIGACVSAGRYVEAIE-------------------------------- 134
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
L+++M++ V ++ T +L C +G EIHG V+ + V N
Sbjct: 135 -------LYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCN 187
Query: 452 GLLNMYMKCGCLEEGHLVFEQ--IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
L+ MY KCG L ++F+ +EK D ++WNS+IS + G AL+ F M E G
Sbjct: 188 ALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGV 247
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
+ + FV+ L AC + GR I ++++ A ++ + G +++A
Sbjct: 248 ESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNA-LIAMYANCGQMEDAE 306
Query: 570 DIVKNMPMEPNAYVWGTLLN 589
+ K+M + + W TLL+
Sbjct: 307 RVFKSMLFK-DCVSWNTLLS 325
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 339 bits (869), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 202/660 (30%), Positives = 335/660 (50%), Gaps = 113/660 (17%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN++L+ + +E + + +M + D FT P+ ++AC G R +G+++H
Sbjct: 9 WNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKAC---GELR-EVKYGEMIH 64
Query: 160 NHVLQ-MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
+ + + ++++ + LI MY K G+M+++ ++F+++ + ++W+ M SGF N
Sbjct: 65 GFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSP 124
Query: 219 DGALELFKRMELEG-LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
A+E F+RM + P+ VT +L+S+
Sbjct: 125 YQAVEFFRRMATASDVTPDRVTLITLVSA------------------------------- 153
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
C L+ +G+ +HGFV++ GF + + + N+L+ Y K K A NLF + EK+
Sbjct: 154 ----CTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKD 209
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS-----NGR 392
++SW+ +I Y + G EA+ VF+++ +D G+ PNV + V+ A A+ GR
Sbjct: 210 VISWSTVIACYVQNGAAAEALRVFNEM--IDDGT--EPNVATVLCVLQACAAANDLEQGR 265
Query: 393 ------------------------------GEEALDLFRKMQLAKVVANSVTISG----- 417
EEA +F ++ VV+ ISG
Sbjct: 266 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISGFTLNG 325
Query: 418 ---------------------------LLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
+L C+E L H +V++ + N +
Sbjct: 326 MAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDSNPFIG 385
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG-F 509
L+ +Y +CG L VF +I KD + W S+I+GYG++G G AL TF M+ +
Sbjct: 386 ASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMVRSSEV 445
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
KP+ V F+++LSACSHAGL++EG RIF++MV ++R+ P +EHYA +VDLLGR G L A
Sbjct: 446 KPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGELDTAI 505
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASG 629
+I K MP P + GTLL +CR+H+N ++AE +A Q+F L + G YML+SN+Y G
Sbjct: 506 EITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKQLFELESNHAGYYMLMSNMYGVKG 565
Query: 630 RWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
WE+ K+R S K +G+KK +S IE++RK+H F + + L + + V +L+EL L M+
Sbjct: 566 EWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHKFVADDDLHPEKEPVYGLLKELDLHMK 625
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 117/234 (50%), Gaps = 6/234 (2%)
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
M + + W+ ++ + + + E+ + F +M + ++ T+ L C E + G
Sbjct: 1 MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60
Query: 432 REIHGHVVR-VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
IHG + + V++ ++ V + L+ MY+KCG + E +F ++EK D++TW+SM+SG+
Sbjct: 61 EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEK 120
Query: 491 NGLGENALATFEEMIEAG-FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
NG A+ F M A PD V + ++SAC+ GR + ++R +
Sbjct: 121 NGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRR-GFSNDL 179
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+++ ++ +EA ++ K M E + W T++ +C + +N AEA+
Sbjct: 180 SLVNSLLNCYAKSRAFKEAVNLFKMMA-EKDVISWSTVI-ACYV-QNGAAAEAL 230
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 339 bits (869), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 193/586 (32%), Positives = 310/586 (52%), Gaps = 84/586 (14%)
Query: 130 GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD 189
D T+ +I+ C G+ + ++VH HV G++ ++N LI MY K G + +
Sbjct: 14 ADAITYSELIKCCLVRGAVQQ----ARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDE 69
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
+ LFD++ +N +SW M S ++ + AL+ M EG+ PN T++S+L +
Sbjct: 70 ARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA--- 126
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFV 309
C L ++L + +HG ++K G E VFV
Sbjct: 127 CDGL---LNL--------------------------------RQLHGSILKVGLESDVFV 151
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
++ALI Y K G+ A N+F+E+ ++V WN++I +A+ DE +
Sbjct: 152 RSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLH---------- 201
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
L+++M+ A VA+ T++ +L C A L
Sbjct: 202 -----------------------------LYKRMKRADFVADQSTLTSVLRACTGLALLE 232
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ-IEKKDLITWNSMISGY 488
+GR++H HV++ ++++++ N LL+MY KCG LE+ +L+F + + +KD+I+W++MI+G
Sbjct: 233 LGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGL 290
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
NG +AL FE M G KP+ + + VL ACSHAGLVN+G F M F I+P
Sbjct: 291 AQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPG 350
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
EHY C++DLLGRAG L EA ++ M EP+A W LL +CR+HKN D+A A +I
Sbjct: 351 REHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEIL 410
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L G+Y+LLSNIYA S +WED A+VR +T+G+KK G SWIEV +++H F G+
Sbjct: 411 KLDPADAGTYILLSNIYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGD 470
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQ 714
+ ++ + L +L ++ G VPD + +L ++ G++ +Q
Sbjct: 471 NSHPRIEEIKRELSQLIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQ 516
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 203/444 (45%), Gaps = 85/444 (19%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
+ Q + VH + G FL ++++Y +FG L +ARN+F+ P + + W +
Sbjct: 31 AVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLFDEMP---DRNVVSWTT 87
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
++ ++ L AL + M + GV + +T+ V+RAC + + R +H +
Sbjct: 88 MISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNLR-------QLHGSI 140
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
L++G + +V + + LI Y+K+G+ D+ +F+++ + + WN + GFA N D D L
Sbjct: 141 LKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETL 200
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC 282
L+KRM+ +FV S L+S VL C
Sbjct: 201 HLYKRMK----RADFVADQSTLTS-------------------------------VLRAC 225
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE-IEEKNIVSW 341
LA +G+ +H V+K ++ + + NAL+ +Y K G ++ A LF+ + EK+++SW
Sbjct: 226 TGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISW 283
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
+ +I A+ G +A+++F ++ +PN I+ V+ A + G + F+
Sbjct: 284 STMIAGLAQNGFSADALKLFEAMK----SKGPKPNYITILGVLFACSHAGLVNDGWYYFQ 339
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
M+ E ++ GRE +G ++ ++L + G L+ +K
Sbjct: 340 SMK-------------------EHFGIDPGREHYGCII------DLLGRAGKLDEAVK-- 372
Query: 462 CLEEGHLVFEQIEKKDLITWNSMI 485
L+ E + D +TW ++
Sbjct: 373 ------LIHEMNHEPDAVTWRILL 390
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 195/448 (43%), Gaps = 59/448 (13%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+ +L+ C + L+Q+H ++ G + F+ + ++ Y++ G DA NVF
Sbjct: 120 YSSVLRACDGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEM---I 176
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
++WNSI+ N + L LY +M++ + D T V+RAC +
Sbjct: 177 TGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLA----LLE 232
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV-KNYISWNMMFSGF 212
G+ VH HVL+ + ++ + N L+ MY K G + D+ LF ++ K+ ISW+ M +G
Sbjct: 233 LGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGL 290
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVG 271
A N AL+LF+ M+ +G +PN++T +L + + G + + F M++ GI+ G
Sbjct: 291 AQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPG 350
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
E H G +I + G+ G + A L
Sbjct: 351 RE---------------HYGCIID--------------------LLGRAGKLDEAVKLIH 375
Query: 332 EI-EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
E+ E + V+W L+ + D A+ ++ KLD ++S +A++
Sbjct: 376 EMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLS-----NIYANS 430
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
+ E+ ++ RKM+ V + + V + A +G H + + + L+Q
Sbjct: 431 QKWEDVAEVRRKMRTRGVKKDPGC--SWIEVSKQVHAFILGDNSHPRIEEIKRELSQLIQ 488
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
M+ G + + + V + +E + +
Sbjct: 489 R-----LMRLGYVPDTNFVLQDLEGEQM 511
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 137/309 (44%), Gaps = 36/309 (11%)
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
M ++ A+++T S L+ C A+ R +H HV + N L+NMY+K G
Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
L+E +F+++ +++++W +MIS Y + L AL M+ G +P+ + +VL A
Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126
Query: 523 CSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAY 582
C GL+N R + + +E + + ++D + G +A ++ M + +
Sbjct: 127 CD--GLLN--LRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEM-ITGDLV 181
Query: 583 VWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAK 642
VW +++ +N+D E + ++Y R + A S
Sbjct: 182 VWNSIIGG--FAQNSDGDETL-------------------HLYKRMKRADFVADQ--STL 218
Query: 643 TKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK-GCVPDNDIIL 701
T L+ G + +E+ R++H+ DL +L L M K G + D +++
Sbjct: 219 TSVLRACTGLALLELGRQVHVHVL--KYDQDL-----ILNNALLDMYCKCGSLEDANLLF 271
Query: 702 WEMMGKKNV 710
MM +K+V
Sbjct: 272 TRMMTEKDV 280
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 339 bits (869), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 184/562 (32%), Positives = 308/562 (54%), Gaps = 49/562 (8%)
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
D TFP +I+AC ++R S+G V HV ++GF +V +VN + ++ G M+ +
Sbjct: 120 DHLTFPFLIKAC---ARLQYR-SYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFA 175
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
+LFD+ V++ +S W +L+ + R
Sbjct: 176 RRLFDESPVRDVVS-----------------------------------WNTLIGGYVRS 200
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVV--LSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
G E ++LF + + G V + + V+ +S CA + +GK +H FV G V
Sbjct: 201 GLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVR 260
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
+ NA++ +Y K G +++A ++F I + VSW +I +A G+ ++A +F ++ + D
Sbjct: 261 LMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERD 320
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
V W+A++ + N +G+EA+ LF +MQ +KV N +T+ LLS C++ AL
Sbjct: 321 --------VFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGAL 372
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+G +H ++ R ++ ++ + L++MY KCG +++ VF +I ++ +TW SMI G
Sbjct: 373 EMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGL 432
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
+G + A+ F+ MI+ G +PD + F+ VLSAC HAGLV GR+ F +M ++ +E +
Sbjct: 433 ANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERK 492
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
M+HY+CM+DLLGRAG L EA +V MPM+P+A VWG L +CRMH N + E A ++
Sbjct: 493 MKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLV 552
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L +G Y+LL+N+YA + + A KVR+ + G++KV G S IE+ +H F +
Sbjct: 553 ELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKD 612
Query: 669 SLQSDLKNVCEVLEELALQMEN 690
D + + L E+ LQM +
Sbjct: 613 KSHLDTNAIYDCLHEITLQMRH 634
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 166/349 (47%), Gaps = 17/349 (4%)
Query: 58 GANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENAL 117
G +A F+ + ++ G + AR +F+ +P + WN+++ V +GL AL
Sbjct: 151 GFSADVFVVNAAMHFWSVRGPMAFARRLFDESPV---RDVVSWNTLIGGYVRSGLPREAL 207
Query: 118 KLYVKMRKLG--VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVN 175
+L+ ++ + G V D T + C MG G+ +H V G + V ++N
Sbjct: 208 ELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLE----LGKRLHEFVDNKGVRCTVRLMN 263
Query: 176 ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
++ MY K G + + +F+++ + +SW M G A + A LF M E
Sbjct: 264 AVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMP----ER 319
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
+ W +L++ + + + +E + LF M+K ++ + +LS C+ L A MG +H
Sbjct: 320 DVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVH 379
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
++ + V + +L+ +Y K G++K A +F+EI +N ++W ++I A G D
Sbjct: 380 HYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHAD 439
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
EA+E F ++ +D G +P+ I++ V+ A G E F M
Sbjct: 440 EAIEYFQRM--IDLGL--QPDEITFIGVLSACCHAGLVEAGRQFFSLMH 484
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 100/194 (51%), Gaps = 7/194 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
+AR G + DAR +F+ P + WN+++ V N + A+ L+ +M+K V +
Sbjct: 300 HARLGMMEDARMLFDEMP---ERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNE 356
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
T ++ AC +G+ G VH+++ + +V + L+ MYAK G + +
Sbjct: 357 ITMVNLLSACSQLGALEM----GMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAIC 412
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+F+++ V+N ++W M G A + D A+E F+RM GL+P+ +T+ +LS+ G
Sbjct: 413 VFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGL 472
Query: 253 LEETMDLFDMMRKR 266
+E F +M +
Sbjct: 473 VEAGRQFFSLMHAK 486
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 339 bits (869), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 218/739 (29%), Positives = 354/739 (47%), Gaps = 123/739 (16%)
Query: 31 LDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
L + +L+ C + L K++H+ ++ + ++ L +L++Y + L DA+ VF+
Sbjct: 63 LSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFD 122
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
P + + + W S++ NG NAL+ Y +M + GV+ D FTF +I+AC +G
Sbjct: 123 AMP---ERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGD 179
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
G+ +H HVL+ F ++ N LI MY K + D
Sbjct: 180 I----GLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIID------------------ 217
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
AL++F RM L ++W S+++ ++ G E + F M +G
Sbjct: 218 -------------ALDVFSRMATRDL----ISWGSMIAGFSQLGYELEALCYFKEMLHQG 260
Query: 268 IEVGAEAI-AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK---------------- 310
+ + E I V S C+ L G+ +HG IK G VF
Sbjct: 261 VYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCA 320
Query: 311 ---------------NALICVYGKHGDVKVAQNLFSEIEEKNIVS--------------- 340
NA+I + GD K A FS++ + ++
Sbjct: 321 RVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSP 380
Query: 341 ------------------------WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
N L+T YA+ +A+ F ++ +
Sbjct: 381 SELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRC-------NAD 433
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
++SW+A++ A + + EE L + M +++ + +T++ +L AE+ ++ IG ++H
Sbjct: 434 LVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHC 493
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
+ ++ +N + V NGL+++Y KCG L+ H +F+ + D+++W+S+I GY G GE
Sbjct: 494 YALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEE 553
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
AL F+ M KP+ V FV VL+ACSH GLV EG +++ M +EF I P EH +CMV
Sbjct: 554 ALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMV 613
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
DLL RAG L EA + M +P+ VW TLL +C+ H N DV + A I + +
Sbjct: 614 DLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSA 673
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKN 676
+++LL NIYA+ G WED A++R K +G++KV GQSWIEVK +IH+F +SL +
Sbjct: 674 AHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNK 733
Query: 677 VCEVLEELALQMENKGCVP 695
+ +LEEL LQM + G VP
Sbjct: 734 IYTMLEELLLQMLDAGYVP 752
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 194/445 (43%), Gaps = 77/445 (17%)
Query: 255 ETMDLFDMMRKR-GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
E + F+ ++K+ G + A ++S C+ L + GK IH ++K + ++N +
Sbjct: 45 EAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHI 104
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL-------EK 366
+ +YGK +K AQ +F + E+N+VSW ++I Y++ G A+E + Q+ ++
Sbjct: 105 LNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQ 164
Query: 367 LDGGSMER------------------------PNVISWSAVIGAFASNGRGEEALDLFRK 402
GS+ + ++I+ +A+I + + +ALD+F +
Sbjct: 165 FTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSR 224
Query: 403 MQLAKVVANSVTISG--------------------------------LLSVCAESAALNI 430
M +++ I+G + S C+
Sbjct: 225 MATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEY 284
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
GR++HG ++ + +++ L +MY KCG L +VF QI + DL+ WN++I+G+
Sbjct: 285 GRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAY 344
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
G + A+A F +M G PD + ++L AC+ + +G ++ + + ++ +
Sbjct: 345 GGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHG-YINKMGLDLDVP 403
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL 610
++ + + L++A + M + W +L +C H A ++F L
Sbjct: 404 VCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQ-------AEEVFRL 456
Query: 611 -----ITETTGSYMLLSNIYAASGR 630
I++ Y+ L+N+ AS
Sbjct: 457 LKLMCISQHRPDYITLTNVLGASAE 481
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 339 bits (869), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 201/661 (30%), Positives = 337/661 (50%), Gaps = 85/661 (12%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
K++ +Q H++++ G + ++FLA +++ YA + +R VF++ + LWN
Sbjct: 37 KSLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQ---HKNVFLWN 93
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
S++ V N LY A +L+ +M VL D FT + + +G+ FS G+ +H
Sbjct: 94 SLINGCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGAL---FS-GKSIHGK 149
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
++ GF + + N ++ MY K G +S K+FD++ ++N SWN++ +G+A++ +C
Sbjct: 150 SIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNC--- 206
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
NF EET + M+ + A I+ +L +
Sbjct: 207 --------------NF---------------REETWEFVKQMQMDEVRPDAYTISSLLPL 237
Query: 282 C-ADLAADHMGKVIHGFVIKG----GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
C D+ G+ +H +++K G + V + LI +Y + V V + +F ++ +
Sbjct: 238 CDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCR 297
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
N V SW+A+I + NG +EA
Sbjct: 298 N---------------------------------------VFSWTAMINGYVENGDSDEA 318
Query: 397 LDLFRKMQLAK-VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
L LFR MQ+ V N V++ +L C+ + L GR+IHG VR +N + + N L++
Sbjct: 319 LSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALID 378
Query: 456 MYMKCGCLEEGHLVFEQIEK-KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
MY KCG L+ VFE KD I+W+SMISGYG++G G+ A+ +++M++AG +PD +
Sbjct: 379 MYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMI 438
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
V +LSAC +GLVNEG I+ ++ ++ IEP +E AC+VD+LGRAG L A D +K
Sbjct: 439 TTVGILSACGRSGLVNEGLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKA 498
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
+P+EP VWG L++ +H + ++ E + L + +Y+ +SN+YA+S RW+
Sbjct: 499 IPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPKNPSNYVSISNLYASSRRWDAV 558
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
A+VR K K L+KV G SWI + K H F + ++ +L++L L M + C
Sbjct: 559 AEVRRMMKDKRLRKVPGCSWISINNKTHCFYVADKAHPSSTSIYNMLDDLLLTMNDAICS 618
Query: 695 P 695
P
Sbjct: 619 P 619
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 216/696 (31%), Positives = 349/696 (50%), Gaps = 95/696 (13%)
Query: 11 QFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVL 70
Q S S P + N +L F+ CKT+ LKQVH Q+I + A L
Sbjct: 80 QSSMSRTPNPLTNPPSNPQILSLFN----PCKTLRHLKQVHAQIITHHNSPFQLSALASL 135
Query: 71 SIYARFGRLFD-ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL 129
S + F A+ +F S L+NS++R S+ AL LY M + G+
Sbjct: 136 SALSPFPTFLAYAKTIFHHLQNPPPS---LYNSLIRALSSSKTPLEALPLYHTMLQSGLK 192
Query: 130 GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD 189
D T+P VI+AC S + FG +VH HV++ GF+ + +IV+ LI +YA +
Sbjct: 193 PDHMTYPFVIKACN-ESSVTW---FGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGA 248
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
+ +LF+ ++ V+W +++ + +
Sbjct: 249 AKQLFNLCSARD-----------------------------------VVSWNAMIDGYVK 273
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFV 309
+ +FD M VC D+ + +I+G+ I G ++
Sbjct: 274 HVEMGHARMVFDRM-----------------VCRDVIS--WNTMINGYAIVGKIDE---- 310
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
A+ LF E+ E+N+VSWN+++ + + G ++A +FS++ D
Sbjct: 311 ----------------AKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRD- 353
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
V+SW++++ +A G+ EAL LF +M+ V T+ LLS CA AL+
Sbjct: 354 -------VVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALD 406
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
G +H ++ + N +V L++MY KCG + VF +E KD++ WN++I+G
Sbjct: 407 KGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMA 466
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
++G + A F+EM EAG +P+ + FVA+LSACSHAG+V+EG+++ D M + IEP++
Sbjct: 467 IHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKV 526
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
EHY C++DLL RAG L+EA +++ MPMEPN G LL CR+H N ++ E + ++
Sbjct: 527 EHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLIN 586
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
L +G Y+LLSNIYAA+ +W+DA KVR K G+ KV G S IE+K +H F +G+
Sbjct: 587 LQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDW 646
Query: 670 LQSDLKNVCEVLEELALQMENK-GCVPDNDIILWEM 704
+ + E L E+ ++++ G D +L +M
Sbjct: 647 SHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDM 682
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 187/542 (34%), Positives = 296/542 (54%), Gaps = 16/542 (2%)
Query: 155 GQIVHNHVLQMGFQ-GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H H+ GF+ N + N LIGMY K G+ D+ K+FD++ ++N SWN M SG+
Sbjct: 65 GKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYV 124
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ A +F M E + V+W +++ +A+ G L E + + R+ GI+
Sbjct: 125 KSGMLVRARVVFDSMP----ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEF 180
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ A +L+ C + + HG V+ GF V + ++I Y K G ++ A+ F E+
Sbjct: 181 SFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
K+I W LI+ YA+ G + A ++F + M N +SW+A+I + G G
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAAEKLFCE--------MPEKNPVSWTALIAGYVRQGSG 292
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
ALDLFRKM V T S L A A+L G+EIHG+++R ++ N +V + L
Sbjct: 293 NRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSL 352
Query: 454 LNMYMKCGCLEEGHLVFEQIEKK-DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
++MY K G LE VF + K D + WN+MIS +GLG AL ++MI+ +P+
Sbjct: 353 IDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPN 412
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
V +L+ACSH+GLV EG R F+ M + I P EHYAC++DLLGRAG +E +
Sbjct: 413 RTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKI 472
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
+ MP EP+ ++W +L CR+H N ++ + A ++ L E++ Y+LLS+IYA G+WE
Sbjct: 473 EEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWE 532
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF--SSGNSLQSDLKNVCEVLEELALQMEN 690
K+R K + + K SWIE+++K+ F S G+ + + + +L LA +E
Sbjct: 533 LVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVIEE 592
Query: 691 KG 692
+
Sbjct: 593 EA 594
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 179/385 (46%), Gaps = 41/385 (10%)
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
S LS HA L + + + + ++GI + + +A +L C D + GK IH +
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 302 GFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
GF+ + N LI +Y K G A +F ++ +N+ SWN +++ Y ++G+ A V
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
F SM +V+SW+ ++ +A +G EAL +++ + + + N + +GLL+
Sbjct: 136 FD--------SMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLT 187
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL-- 478
C +S L + R+ HG V+ N+++ +++ Y KCG +E F+++ KD+
Sbjct: 188 ACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHI 247
Query: 479 -----------------------------ITWNSMISGYGMNGLGENALATFEEMIEAGF 509
++W ++I+GY G G AL F +MI G
Sbjct: 248 WTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGV 307
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
KP+ F + L A + + G+ I M+R + P + ++D+ ++G L+ +
Sbjct: 308 KPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASE 366
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMH 594
+ + + + W T++++ H
Sbjct: 367 RVFRICDDKHDCVFWNTMISALAQH 391
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 192/411 (46%), Gaps = 51/411 (12%)
Query: 31 LDCFDHLLQQC---KTIHQLKQVHNQLIVTG-ANASAFLAARVLSIYARFGRLFDA---- 82
D LLQQC K++ Q K +H L +TG + L+ ++ +Y + G+ DA
Sbjct: 46 FDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVF 105
Query: 83 ---------------------------RNVFETAPFDCKSSSLLWNSILRVNVSNGLYEN 115
R VF++ P + + WN+++ +G
Sbjct: 106 DQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMP---ERDVVSWNTMVIGYAQDGNLHE 162
Query: 116 ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVN 175
AL Y + R+ G+ + F+F ++ AC + S + + + + H VL GF NV +
Sbjct: 163 ALWFYKEFRRSGIKFNEFSFAGLLTAC--VKSRQLQLN--RQAHGQVLVAGFLSNVVLSC 218
Query: 176 ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
+I YAK GQM + + FD++ VK+ W + SG+A D + A +LF M E
Sbjct: 219 SIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMP----EK 274
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
N V+WT+L++ + R G +DLF M G++ + L A +A+ GK IH
Sbjct: 275 NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIH 334
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK-NIVSWNALITSYAEAGLC 354
G++I+ V ++LI +Y K G ++ ++ +F ++K + V WN +I++ A+ GL
Sbjct: 335 GYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLG 394
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+A+ + + K +PN + ++ A + +G EE L F M +
Sbjct: 395 HKALRMLDDMIKF----RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTV 441
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 154/355 (43%), Gaps = 43/355 (12%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F LL C QL +Q H Q++V G ++ L+ ++ YA+ G++ A+ F+
Sbjct: 182 FAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT 241
Query: 91 F-----------------DCKSSSLL-----------WNSILRVNVSNGLYENALKLYVK 122
D +++ L W +++ V G AL L+ K
Sbjct: 242 VKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRK 301
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M LGV + FTF + A + S R G+ +H ++++ + N +++ LI MY+
Sbjct: 302 MIALGVKPEQFTFSSCLCASASIASLR----HGKEIHGYMIRTNVRPNAIVISSLIDMYS 357
Query: 183 KMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
K G + S ++F K + + WN M S A + AL + M ++PN T
Sbjct: 358 KSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLV 417
Query: 242 SLLSSHARCGRLEETMDLFDMMR-KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
+L++ + G +EE + F+ M + GI E A ++ + L K + + +
Sbjct: 418 VILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDL---LGRAGCFKELMRKIEE 474
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSE---IEEKNIVSWNALITSYAEAG 352
FE + NA++ V HG+ ++ + E ++ ++ + L + YA+ G
Sbjct: 475 MPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHG 529
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 195/675 (28%), Positives = 338/675 (50%), Gaps = 80/675 (11%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C + L ++ H + G + + F+ +L +Y + G + DA +F+
Sbjct: 146 VLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGM---A 202
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR-- 151
+ + + +++ V G ++AL+L+ +M + GV D V+ +C + F
Sbjct: 203 SPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVV 262
Query: 152 --FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
F GQ +H +++ GF + H+ N LI MY K QM ++ K+FD + + +SWN++
Sbjct: 263 RAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILI 322
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVT------------------------------ 239
+GF ALE+ ME G EPN VT
Sbjct: 323 TGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVT 382
Query: 240 -WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
W +LLS + + ++T++LF M+ + ++ +AV+LS C+ L +G +H
Sbjct: 383 TWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSAS 442
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
++ + +FV + L+ +Y K G + +A+ +F+ + E+++V
Sbjct: 443 VRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVC------------------ 484
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
W+++I A + EEA D F++M+ ++ + + +
Sbjct: 485 ---------------------WNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASM 523
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
++ CA +++ GR+IH +V+ ++N+ V + L++MY KCG +++ + F+ + K++
Sbjct: 524 INSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNI 583
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
+ WN MI GY NG GE A+ FE M+ +PDGV F+AVL+ CSH+GLV+E F+
Sbjct: 584 VAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNS 643
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
M + I P EHY C++D LGRAG L E ++ NMP + + VW LL +C +H N +
Sbjct: 644 MESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAE 703
Query: 599 VAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
+ E A +F L + Y+LLSNIYA+ GR DA+ VR ++G+ K G SWI+ K
Sbjct: 704 LGECAAKHLFRLDPKNPSPYVLLSNIYASLGRHGDASGVRALMSSRGVVKGRGYSWIDHK 763
Query: 659 RKIHMFSSGNSLQSD 673
+H F + LQ+D
Sbjct: 764 DGVHAFMVADDLQTD 778
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 142/536 (26%), Positives = 260/536 (48%), Gaps = 64/536 (11%)
Query: 60 NASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKL 119
NA ++ AA LS R G L AR + + P + + WN+++ + AL+L
Sbjct: 73 NAYSYNAA--LSAARRAGDLDAARALLDEMP---DRNVVSWNTVIAALARSERAGEALEL 127
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
Y M + G++ FT V+ AC + + G+ H +++G N+ + N L+G
Sbjct: 128 YEGMLREGLVPTHFTLASVLSACGAVAA----LDDGRRCHGLAVKVGLDENLFVENALLG 183
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MY K G + D+ +LFD + N +S+ M G D AL LF RM G+ + V
Sbjct: 184 MYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVA 243
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
+S+L S A+ E FD++R A +G+ IH ++
Sbjct: 244 VSSVLGSCAQACASE-----FDVVR----------------------AFRLGQCIHALIV 276
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
+ GF V N+LI +Y K + A +F + + VSWN LIT + +AG +A+E
Sbjct: 277 RKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALE 336
Query: 360 VFSQLEK-----------------------LDGGSM----ERPNVISWSAVIGAFASNGR 392
V + +E+ L +M RP+V +W+ ++ +
Sbjct: 337 VLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEEL 396
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
++ ++LFR+MQ V + T++ +LS C+ L++G ++H VR ++ ++ V +G
Sbjct: 397 HQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASG 456
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++MY KCG + ++F ++ ++D++ WNSMISG ++ L E A F++M G P
Sbjct: 457 LVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPT 516
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
++ +++++C+ V +GR+I +V++ + + + ++D+ + G + +A
Sbjct: 517 ESSYASMINSCARLSSVPQGRQIHAQIVKD-GYDQNVYVGSALIDMYAKCGNMDDA 571
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/433 (26%), Positives = 206/433 (47%), Gaps = 43/433 (9%)
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
VL G + ++N L+ +Y+ G D+ + F + N S+N S D D A
Sbjct: 34 VLAAGLGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAA 93
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
L M + N V+W +++++ AR R E ++L++ M + G+ +A VLS
Sbjct: 94 RALLDEMP----DRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSA 149
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
C +AA G+ HG +K G ++ +FV+NAL+ +Y K G V+ A LF + N VS+
Sbjct: 150 CGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSF 209
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
A++ +AG D+A+ +F+++ + S R + ++ S+V+G+ A E D+ R
Sbjct: 210 TAMMGGLVQAGSVDDALRLFARMCR----SGVRVDPVAVSSVLGSCAQACASE--FDVVR 263
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
A +G+ IH +VR + V N L++MY KC
Sbjct: 264 -------------------------AFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCM 298
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
++E VF+ + ++WN +I+G+G G AL M E+G +P+ V + +L+
Sbjct: 299 QMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLA 358
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP---ME 578
+C A V R +FD + R P + + ++ + L Q+ ++ + M ++
Sbjct: 359 SCIKARDVLSARAMFDKISR-----PSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQ 413
Query: 579 PNAYVWGTLLNSC 591
P+ +L+SC
Sbjct: 414 PDRTTLAVILSSC 426
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 161/351 (45%), Gaps = 49/351 (13%)
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
V+ G F+ N L+ +Y G A F + N S+NA +++ AG D A
Sbjct: 34 VLAAGLGADTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAA 93
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
+ + M NV+SW+ VI A A + R EAL+L+ M +V T++
Sbjct: 94 RALLDE--------MPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLAS 145
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
+LS C AAL+ GR HG V+V +++N+ V+N LL MY KCG +E+ +F+ + +
Sbjct: 146 VLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPN 205
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS------------- 524
+++ +M+ G G ++AL F M +G + D VA +VL +C+
Sbjct: 206 EVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAF 265
Query: 525 ------HAGLVNE--------GRRIFDMMVREFRIEPQMEHYACMVDL-----------L 559
HA +V + G + DM + +++ ++ + + ++
Sbjct: 266 RLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGF 325
Query: 560 GRAGLLQEASDIVKNMP---MEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
G+AG +A +++ M EPN + +L SC ++ A AM +I
Sbjct: 326 GQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKARDVLSARAMFDKI 376
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 338 bits (868), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 218/755 (28%), Positives = 355/755 (47%), Gaps = 125/755 (16%)
Query: 18 SRPFSI---ITYNNSLLDCFDHLLQQCK---TIHQLKQVHNQLIVTGANASAFLAA--RV 69
+RP SI TY + + +L+ C +I + K VH ++ + +
Sbjct: 48 NRPESIGISETYQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHA 107
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL 129
+Y++ A VF+ P + + W ++ + +GL+ + K + +M G+L
Sbjct: 108 AHVYSKCSEFRAACGVFDEMP---QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGIL 164
Query: 130 GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD 189
D F + +I++C + S G++VH ++ GF ++ + L+ MYAK+G + D
Sbjct: 165 PDKFAYSAIIQSCIGLDSLE----LGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIED 220
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM--------------------- 228
S+ +F+ + N +SWN M SG N A +LF RM
Sbjct: 221 SYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGK 280
Query: 229 --------ELE------GLEPNFVTWTSLLSSHARCGRL--------------------- 253
E++ G+E N + T+L+ +++CG L
Sbjct: 281 LVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWN 340
Query: 254 ------------EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
+E ++L+ M + GI V + A + G+V+HG V+K
Sbjct: 341 AMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKC 400
Query: 302 GFEDYVF-VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G + V V NA+ Y K G ++ + +F +EE++IVSW L+T+Y+++ L +EA+
Sbjct: 401 GLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALAT 460
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
F L R+ A N T S +L
Sbjct: 461 FC------------------------------------LMREEGFA---PNQFTFSSVLI 481
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
CA L GR++HG + + ++ +++ L++MY KCG + E VF++I D+++
Sbjct: 482 SCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVS 541
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
W ++ISGY +GL E+AL F M +G K + V + VL ACSH G+V EG F M
Sbjct: 542 WTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQME 601
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
+ + P+MEHYAC++DLLGR G L +A + ++ MPMEPN VW TLL CR+H N ++
Sbjct: 602 DGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELG 661
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
E A +I + E + +Y+LLSN Y +G +ED +R K +G+KK G SWI VK +
Sbjct: 662 EIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGR 721
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
+H F SG+ K + LEEL ++ K VP
Sbjct: 722 VHKFYSGDQQHPQKKEIYVKLEELREKI--KAMVP 754
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 338 bits (868), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 195/628 (31%), Positives = 323/628 (51%), Gaps = 87/628 (13%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
L +C +++Q+KQ+H Q++ + +F+ ++++ ++ ++ A NVF
Sbjct: 24 LHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQ---DPDV 80
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
LL+N+++R +V N A ++ +M+ GV D FT+P +++AC S + ++
Sbjct: 81 LLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKAC----SGKVWVRVVEM 136
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H V +MGF ++ + N LI Y K G G A
Sbjct: 137 IHAQVEKMGFCLDIFVPNSLIDSYFKCG-----------------------LDGVA---- 169
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
A ++F+ M E + V+W S++ + G L E LFD M +R
Sbjct: 170 --AARKVFEVMA----ERDTVSWNSMIGGLVKVGELGEARRLFDEMPERD---------- 213
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
N ++ Y K G++ A LF ++ +N
Sbjct: 214 -----------------------------TVSWNTILDGYVKAGEMNAAFELFEKMPARN 244
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
+VSW+ ++ Y++AG D A +F + M N++ W+ +I +A G ++A+
Sbjct: 245 VVSWSTMVLGYSKAGDMDMARILFDK--------MPVKNLVPWTIMISGYAEKGLAKDAI 296
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
+L+ +M+ A + + T+ +LS CA S L +G+ +H + R + V N L++MY
Sbjct: 297 NLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMY 356
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG LE +F + +KD+++WN++I G M+G GE AL F M GF PD V FV
Sbjct: 357 AKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFV 416
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
VL AC+HAG V+EG F M R++ + P++EHY CMVDLLGR G L+EA +V +MP+
Sbjct: 417 GVLCACTHAGFVDEGLHYFHAMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPL 476
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
EPNA +WGTLL +CRMH T +AE + ++ +G+ +LSNIYAA+G W++ A +
Sbjct: 477 EPNAIIWGTLLGACRMHSATGLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANI 536
Query: 638 RISAKTKGLKKVAGQSWIEVKRKIHMFS 665
R+ K+ ++K +G S IEV ++H F+
Sbjct: 537 RLRMKSTSIQKPSGGSSIEVDDEVHEFT 564
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 338 bits (868), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 198/683 (28%), Positives = 337/683 (49%), Gaps = 83/683 (12%)
Query: 36 HLLQ---QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
H++Q + K + + KQ+H LI G FL ++++Y++ G L A +F+T P
Sbjct: 10 HVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMP-- 67
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ + + W +++ N + A++ + MR G + F F IRAC +GS
Sbjct: 68 -QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEM-- 124
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H L+ G + + + L MY+K G M D+ K+F+++ K+ +S
Sbjct: 125 --GKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-------- 174
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
WT+++ +++ G EE + F M + +
Sbjct: 175 ---------------------------WTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQ 207
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ L C L A G+ +H V+K GFE +FV NAL
Sbjct: 208 HVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALT------------------ 249
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
Y++AG + A VF G E NV+S++ +I + +
Sbjct: 250 -------------DMYSKAGDMESASNVF-------GIDSECRNVVSYTCLIDGYVETEQ 289
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
E+ L +F +++ + N T S L+ CA AAL G ++H V++++ +++ V +
Sbjct: 290 IEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI 349
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++MY KCG LE F++I I WNS++S +G +GLG++A+ FE M++ G KP+
Sbjct: 350 LVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPN 409
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
+ F+++L+ CSHAGLV EG F M + + + P EHY+C++DLLGRAG L+EA + +
Sbjct: 410 AITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFI 469
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
MP EPNA+ W + L +CR+H + ++ + A ++ L + +G+ +LLSNIYA +WE
Sbjct: 470 NRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWE 529
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
D VR+ + +KK+ G SW++V K H+F + + + E L+ L Q++ G
Sbjct: 530 DVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAG 589
Query: 693 CVPDNDIILWEMMGKKNVKRIQR 715
VP D + +M K + R
Sbjct: 590 YVPXTDSVPLDMDDXMKEKLLHR 612
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 155/397 (39%), Gaps = 76/397 (19%)
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
A+A V+ A GK +H +I G+ F+ N L+ +Y K G++ A LF +
Sbjct: 7 ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTM 66
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
++N+VSW A+I+ ++ EA+ F
Sbjct: 67 PQRNLVSWTAMISGLSQNSKFSEAIRTFC------------------------------- 95
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
M++ V S + CA ++ +G+++H ++ + + V + L
Sbjct: 96 --------GMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNL 147
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
+MY KCG + + VFE++ KD ++W +MI GY G E AL F++MI+ D
Sbjct: 148 EDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQ 207
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI-- 571
+ L AC GR + +V+ E + + D+ +AG ++ AS++
Sbjct: 208 HVLCSTLGACGALKACKFGRSVHSSVVK-LGFESDIFVGNALTDMYSKAGDMESASNVFG 266
Query: 572 ---------------------------------VKNMPMEPNAYVWGTLLNSCRMHKNTD 598
++ +EPN + + +L+ +C +
Sbjct: 267 IDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALE 326
Query: 599 VAEAMASQIFGL-ITETTGSYMLLSNIYAASGRWEDA 634
+ +Q+ + E +L ++Y G E A
Sbjct: 327 QGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHA 363
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 92/179 (51%), Gaps = 2/179 (1%)
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
++ ++ ++ A++ L G+++H ++ + N L+NMY KCG L+ +F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
+ + +++L++W +MISG N A+ TF M G P AF + + AC+ G +
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
G+++ + ++ F I ++ + + D+ + G + +A + + MP + + W +++
Sbjct: 124 MGKQMHCLALK-FGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMID 180
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 190/603 (31%), Positives = 308/603 (51%), Gaps = 87/603 (14%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
+N+I+ ++NG E + Y KMR GV+ D FTFP I+AC + + +H
Sbjct: 107 FNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIK-------KIH 159
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+ + G + +V I + L+ Y K G M + F+++ +++ + WN M
Sbjct: 160 GLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAM----------- 208
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
++ +A+ G+ E ++ F M + + L
Sbjct: 209 ------------------------VNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGXL 244
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
SV A + + G++IHGF +K G++ V V N+LI +YGK
Sbjct: 245 SVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGK-------------------- 284
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
++A+E+F + + D + SW++++ G + L L
Sbjct: 285 -----------CKCIEDALEIFEMMREKD--------IFSWNSIVSVHEQCGDHDGTLRL 325
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN------ILVQNGL 453
+M A + + VT++ +L C+ AAL GREIHG+++ + K+ +L++N +
Sbjct: 326 LDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAV 385
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY KCG + + HLVFE++ KD+ +WN MI GYGM+G G AL F M E KPD
Sbjct: 386 IDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDE 445
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
V FV VLSACSHAG V++GR M ++ + P +EHY C++D+LGRAG L EA ++
Sbjct: 446 VTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELAL 505
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
MP+E N VW LL +CR+HK+ +AE A ++F L E GSY+L+SN+Y A GR+E+
Sbjct: 506 TMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEE 565
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
+VR + + + ++K G SWIE+K +H+F S + + ++ L L ++ G
Sbjct: 566 VLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAXSIYAGLNSLTARLXEHGY 625
Query: 694 VPD 696
VPD
Sbjct: 626 VPD 628
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 171/370 (46%), Gaps = 57/370 (15%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F ++ C + ++K++H L G F+ + +++ Y +FG + A+ FE P
Sbjct: 142 FPCAIKACLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPI-- 199
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+LWN+++ G +E L+ + +M V+ FT + MG +
Sbjct: 200 -RDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDL----N 254
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+I+H ++MG+ V + N LI MY K + D+ ++F+ +R K+ SWN + S
Sbjct: 255 NGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHE 314
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
D DG L L RM G++P+ VT T+
Sbjct: 315 QCGDHDGTLRLLDRMLGAGIQPDLVTVTT------------------------------- 343
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFE------DYVFVKNALICVYGKHGDVKVAQ 327
VL C+ LAA G+ IHG++I G D V +KNA+I +Y K G ++ A
Sbjct: 344 ----VLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAH 399
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA- 386
+F + K++ SWN +I Y G +EA+E+FS++ ++ +P+ +++ V+ A
Sbjct: 400 LVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQ----LKPDEVTFVGVLSAC 455
Query: 387 ----FASNGR 392
F S GR
Sbjct: 456 SHAGFVSQGR 465
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 129/274 (47%), Gaps = 21/274 (7%)
Query: 340 SWNALITSYAE----AGLCDEAVEVFSQLE------KLDGGSMERP---NVISWSAVIGA 386
S N L S++ AG + V F QLE L G + NV +++A+I
Sbjct: 54 SRNGLRPSFSPLGRAAGFLETLVSSFVQLEIELPSNTLKAGENDPTHEINVFAFNAIISG 113
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
F +NG EE + ++KM+ V+ + T + C + + ++IHG + + + +
Sbjct: 114 FITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELD 170
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+ + + L+N Y+K G +E + FE++ +D++ WN+M++GY G E L TF M +
Sbjct: 171 VFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMND 230
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
P LS + G +N GR I ++ + + ++D+ G+ ++
Sbjct: 231 ESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMK-MGYDSGVAVSNSLIDMYGKCKCIE 289
Query: 567 EASDIVKNMPMEPNAYVWGTLLN---SCRMHKNT 597
+A +I + M E + + W ++++ C H T
Sbjct: 290 DALEIFEMM-REKDIFSWNSIVSVHEQCGDHDGT 322
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 158/369 (42%), Gaps = 59/369 (15%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H + G ++ ++ ++ +Y + + DA +FE + WNSI+ V+
Sbjct: 259 IHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR---EKDIFSWNSIVSVHEQ 315
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ- 168
G ++ L+L +M G+ D T V+ AC + + G+ +H +++ G
Sbjct: 316 CGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMH----GREIHGYMIVSGLGK 371
Query: 169 -----GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
+V + N +I MYAK G M D+ +F+++ K+ SWN+M G+ ++ + ALE
Sbjct: 372 DGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALE 431
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
+F RM L+P+ VT+ +LS+ + G + + + M+ +
Sbjct: 432 MFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSK----------------- 474
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE-EKNIVSWN 342
+ + E Y V + L G+ G + A L + E N V W
Sbjct: 475 -------------YDVAPTIEHYTCVIDML----GRAGQLDEAYELALTMPIEANPVVWR 517
Query: 343 ALITS---YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
AL+ + + A L + A + +LE GS + S V GA GR EE L++
Sbjct: 518 ALLAACRLHKHAVLAEVAAQRVFELEPEHCGSY-----VLMSNVYGAV---GRYEEVLEV 569
Query: 400 FRKMQLAKV 408
M+ V
Sbjct: 570 RHTMRQQNV 578
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 214/695 (30%), Positives = 364/695 (52%), Gaps = 55/695 (7%)
Query: 37 LLQQC----KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
LL++C K++ ++K VH +++ G L ++++Y AR+VFE FD
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFEN--FD 66
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV-LGDGFTFPLVIRACKFMGSFRFR 151
+S +WNS++ N ++ + L+++ ++ + + D FTFP VI+A +G R
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG----R 122
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
G+++H V++ G+ +V + + L+GMYAK +S ++FD++ ++ SWN + S
Sbjct: 123 EFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISC 182
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
F + + + ALELF RME G EPN V+ T +S+ +R LE ++ K+G E+
Sbjct: 183 FYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 272 AEAIAVVLSV-----CADLAADHMGKV-----------IHGFVIKGGFEDYVFVKNALIC 315
+ ++ + C ++A + K+ I G+V KG + V + N +I
Sbjct: 243 EYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMII 302
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWN-------------------ALITSYAEAGLCDE 356
+ + L + +N++ +LI Y + G +
Sbjct: 303 EGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANL 362
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
A VFS+ +K D SW+ +I ++ S G +A++++ +M V + VT +
Sbjct: 363 AETVFSKTQK-DVAE-------SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFT 414
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
+L C++ AAL G++IH + + + L+ + LL+MY KCG +E +F I KK
Sbjct: 415 SVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D+++W MIS YG +G AL F+EM + G KPDGV +AVLSAC HAGL++EG + F
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFF 534
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP-MEPNAYVWGTLLNSCRMHK 595
M ++ IEP +EHY+CM+D+LGRAG L EA +I++ P NA + TL ++C +H
Sbjct: 535 SQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHL 594
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
+ + +A + + +YM+L N+YA+ W+ A +VR+ K GL+K G SWI
Sbjct: 595 EHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWI 654
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
E+ K+ F + + +NV E L L+ ME+
Sbjct: 655 EMSDKVCHFFAEDRSHLRAENVYECLALLSGHMES 689
>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Glycine max]
Length = 805
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 219/760 (28%), Positives = 375/760 (49%), Gaps = 114/760 (15%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANAS--AFLAARVLSIYARFGRLFDARNVFET 88
+ LLQ C + + Q+H +I G + F+ ++++ +YA+ G A +F
Sbjct: 54 YGTLLQGCVYERALPLALQLHADVIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRD 113
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
+P + W +I+ ++ G E AL Y+KM++ G+ D F P V++AC +
Sbjct: 114 SP---SPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWV 170
Query: 149 RFRFSFGQIVHNHVLQ-MGFQGNVHIVNELIGMYAKMG----------QMSD-------- 189
RF G+ VH V++ +G + V++ L+ MY K G +MS+
Sbjct: 171 RF----GKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNS 226
Query: 190 -------------SFKLFDKVRVKNYISWNMMFSGF---------------ALNFDCDGA 221
+ ++F ++R++ + SGF G
Sbjct: 227 MVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGG 286
Query: 222 LEL------------FKRMELEGLEPNF--------VTWTSLLSSHARCGRLEETMDLFD 261
LEL FK +E E F VTW +++ +A+ G +E+ +++
Sbjct: 287 LELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVKDVVTWNLVVAGYAQFGMVEKALEMCC 346
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
+MR+ G+ ++ +L+V AD +G H + +K FE V V + +I +Y K G
Sbjct: 347 VMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCG 406
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL----------------- 364
+ A+ +FS + +K+IV WN ++ + AE GL EA+++F Q+
Sbjct: 407 RMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVVSWNSLIF 466
Query: 365 ----------------EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
E G M PN+I+W+ ++ NG G A+ +FR+MQ +
Sbjct: 467 GFFKNGQVAEARNMFAEMCSSGVM--PNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGI 524
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
NS++I+ LS C A L GR IHG+V+R ++++I + +++MY KCG L+
Sbjct: 525 RPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKC 584
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
VF+ K+L +N+MIS Y +G AL F++M + G PD + +VLSACSH GL
Sbjct: 585 VFKMCSTKELYVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLSACSHGGL 644
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ EG ++F MV E +++P EHY C+V LL G L EA + MP P+A++ G+LL
Sbjct: 645 MKEGIKVFKYMVSELQMKPSEEHYGCLVKLLANDGQLDEALRTILTMPSHPDAHILGSLL 704
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
+C + + ++A+ +A + L + +G+Y+ LSN+YAA G+W+ + +R K KGL+K
Sbjct: 705 TACGQNNDIELADYIAKWLLKLDPDNSGNYVALSNVYAAVGKWDKVSNLRGLMKEKGLRK 764
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
+ G SWIEV +++H+F + + + + L+ L +M
Sbjct: 765 IPGCSWIEVGQELHVFIASDRSHPKTEEIYVTLDLLGFEM 804
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 156/351 (44%), Gaps = 44/351 (12%)
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
+ L PN + T SS + GR+ E ++ M + VG +L C A +
Sbjct: 11 QTLTPNQFSLTHF-SSLCKHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPL 69
Query: 291 GKVIHGFVIKGG--FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+H VIK G F FV + L+ +Y K G + A LF +
Sbjct: 70 ALQLHADVIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRD---------------- 113
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
PNV SW+A+IG G EEAL + KMQ +
Sbjct: 114 -----------------------SPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGL 150
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVR-VSMNKNILVQNGLLNMYMKCGCLEEGH 467
++ + +L C + G+ +H VV+ + + + + V L++MY KCG +E+
Sbjct: 151 PPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAG 210
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
VF+++ +++ +TWNSM+ Y NG+ + A+ F EM G + VA +AC+++
Sbjct: 211 KVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSE 270
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
V EGR+ + V +E + +++ + GL++EA + +NM ++
Sbjct: 271 AVGEGRQGHGLAVVG-GLELDNVLGSSIMNFYFKVGLIEEAEVVFRNMAVK 320
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 221/775 (28%), Positives = 378/775 (48%), Gaps = 127/775 (16%)
Query: 32 DCFDHLLQQC---KTIHQLKQVHNQLIVTGA--NASAFLAARVLSIYARFG------RLF 80
+ + LLQ C + +H +Q+H +++ G + ++ +++ YA+ RLF
Sbjct: 80 EIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLF 139
Query: 81 D---ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPL 137
RNVF W +I+ + G E+AL +++M++ GV D F P
Sbjct: 140 HRLRVRNVFS------------WAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPN 187
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGF------------------------------ 167
V++AC GS + G+ VH +VL+MGF
Sbjct: 188 VLKAC---GSLQL-IGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSM 243
Query: 168 -QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF---ALNFDC--DG- 220
+ NV N +I Y + G ++ +F +RV+ + + F + N D +G
Sbjct: 244 VEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGK 303
Query: 221 ---ALELFKRMELEG--------------------------LEPNFVTWTSLLSSHARCG 251
A+ + ++L+ LE + VTW L+SS+ +
Sbjct: 304 QGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHH 363
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
++ + +++ +MR + + ++ +LS A + +GK H + I+ E V V N
Sbjct: 364 QVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVAN 423
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK----- 366
++I +Y K + A+ +F E+++V WN L+ +YA+ GL EA+++F Q++
Sbjct: 424 SIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPP 483
Query: 367 ------------LDGGSME--------------RPNVISWSAVIGAFASNGRGEEALDLF 400
L G + +PN+I+W+ +I A +G G EA+ F
Sbjct: 484 NVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFF 543
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
+KMQ A + + +I+ +L C + +L GR IHG + R ++ V L++MY KC
Sbjct: 544 QKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKC 603
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
G ++E VF + K+L +N+MIS Y ++G ALA F+ + + G +PD + F ++L
Sbjct: 604 GSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSIL 663
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
SACSHAGLVNEG +F MV + + P MEHY C+V LL R G L EA ++ MP +P+
Sbjct: 664 SACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPD 723
Query: 581 AYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRIS 640
A++ G+LL +CR H ++ E ++ +F L +G+Y+ LSN YAA+GRW + + +R
Sbjct: 724 AHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDL 783
Query: 641 AKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
K +GL+K G SWI+ K+++F +G+ + + +L L +M G VP
Sbjct: 784 MKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEMRFMGYVP 838
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 169/360 (46%), Gaps = 39/360 (10%)
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
+SS + G L+E++ L M ++G E +L C A H G+ IH ++K G
Sbjct: 51 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNG- 109
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
D+ F KN + E K L+ YA+ + AV +F +
Sbjct: 110 -DF-FAKNEYV-------------------ETK-------LVVFYAKCDFPEVAVRLFHR 141
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
L NV SW+A++G G E+AL F +MQ V ++ + +L C
Sbjct: 142 LRV--------RNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACG 193
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
+ +G+ +HG+V+++ + V + L++MY KCG LE+ VF+ + +K+++TWNS
Sbjct: 194 SLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNS 253
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
MI GY NGL + A+ F +M G +P V + LSA ++ + EG++ + +
Sbjct: 254 MIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILN- 312
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
++ + +++ + GL+++A + M +E + W L++S H A M
Sbjct: 313 SLDLDNILGSSIINFYSKVGLIEDAELVFSRM-LEKDVVTWNLLISSYVQHHQVGKALNM 371
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 261/456 (57%), Gaps = 55/456 (12%)
Query: 295 HGFVIKGGFEDYVFVKNALICVYGK-------------------------------HGDV 323
H V+K G + FV NALI Y K G+V
Sbjct: 224 HAHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEV 283
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD-------------GG 370
A+++F E+ EK+ VSWN ++ YA+AG ++A E+F ++ + G
Sbjct: 284 DAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKG 343
Query: 371 SME----------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
ME N+++W+ ++ A A G EEA LF +M A + + + + +L+
Sbjct: 344 DMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILA 403
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE-QIEKKDLI 479
CAES +L +G+ IH HV + ++++ LV N L++M+ KCGC+ +F+ +I +KDL+
Sbjct: 404 ACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLV 463
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN +I G+ M+G GE AL F +M + GF PD V + VLSAC+H GLV EGRR F M
Sbjct: 464 SWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANM 523
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
++ I+PQ+EHY CMVDLLGR GL++EA D++K MP EPN +WG+LL++CR+HKN +
Sbjct: 524 ETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEY 583
Query: 600 AEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKR 659
AE +++ L + G+Y +LSNIYA +G+W D AK R+ K G +K AG SWIE+
Sbjct: 584 AELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNE 643
Query: 660 KIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
H F+ G+ + + ++++ L+ ++ GCVP
Sbjct: 644 AFHEFTVGDRKHPESDQISDMIDRLSSHVKFVGCVP 679
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 193/428 (45%), Gaps = 81/428 (18%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA------PFDCKSSS 97
+ ++++H QL+ G + A+++++ YA R+ R VF A PF S++
Sbjct: 111 LRHVQELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSAAVALPNSPFP-SSTT 169
Query: 98 LLWNSILRVNVSNGLYENALKLY--VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
LL ++LR N L AL ++ V +R+ G FT+ +I+A G R +
Sbjct: 170 LLTKTLLRAYALNSLPHAALAVFLDVPLRQRGT----FTYSFLIKALAAAGLTPVRGA-- 223
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV---------------- 199
H HV+++G + + N LI Y+K +SD+ K+FD++
Sbjct: 224 ---HAHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQ 280
Query: 200 ---------------KNYISWNMMFSGFALNFDCDGALELFKRMELEGL----------- 233
K+ +SWN M G+A + + A ELF+RM +
Sbjct: 281 GEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYC 340
Query: 234 ----------------EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
N VTWT ++S+ A+ G +EE LF M IE+ A+
Sbjct: 341 KKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVS 400
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF-SEIEEK 336
+L+ CA+ + +GK IH V + V NAL+ ++ K G V A +F +EI EK
Sbjct: 401 ILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEK 460
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
++VSWN +I +A G ++A+E+F+Q+++ P+ ++ V+ A G EE
Sbjct: 461 DLVSWNIIIGGFAMHGPGEKALELFAQMKQQGF----HPDAVTLINVLSACTHMGLVEEG 516
Query: 397 LDLFRKMQ 404
F M+
Sbjct: 517 RRFFANME 524
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 13/248 (5%)
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
LI SYA VFS L + ++ A+A N AL +F +
Sbjct: 136 LIASYALLRRVPACRCVFSAAVALPNSPFPSSTTLLTKTLLRAYALNSLPHAALAVFLDV 195
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
L + + T S L+ A +A L R H HVV++ ++ V N L++ Y K L
Sbjct: 196 PLRQ--RGTFTYSFLIKALA-AAGLTPVRGAHAHVVKLGSAEDTFVGNALIDAYSKNQGL 252
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
+ VF+++ +D+++WN+ ++ G + A + F+EM E D V++ +L
Sbjct: 253 SDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEK----DTVSWNTMLDGY 308
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
+ AG + +F M + ++ +V + G ++ A I MP + N
Sbjct: 309 AKAGEAEKAFELFQRMPGRNVVS-----WSTVVSAYCKKGDMEMARVIFDKMPAK-NLVT 362
Query: 584 WGTLLNSC 591
W ++++C
Sbjct: 363 WTIMVSAC 370
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 176/466 (37%), Positives = 276/466 (59%), Gaps = 12/466 (2%)
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL--AADHMGKV 293
V+WTS ++ R L E F MR G+E +LS C D ++ +G +
Sbjct: 10 TIVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSGSETLGDL 69
Query: 294 IHGFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+HG+ K G + ++V V A++ +Y K G VK A+ +F +++KN V+WN +I Y +G
Sbjct: 70 LHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMIDGYMRSG 129
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
AV++F + M P++ISW+A++ F G EEAL FR+MQ++ V +
Sbjct: 130 QVHNAVKLFDK--------MPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDY 181
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
V I L+ C AL++G +H +V+ N+ V N L+++Y +CGC+E VF++
Sbjct: 182 VAIIAALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDK 241
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+EK+ +++WNS+I G+ NG +L F +M E GFKP+ V F L+ACSH GLV+EG
Sbjct: 242 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEG 301
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
R F M R++ I P++EHY C+VDL RAG L++A +V++MPM+PN V G+LL +CR
Sbjct: 302 LRFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACR 361
Query: 593 MH-KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
H NT +AE + + L ++ +Y++LSN+YAA +WE A+++R K GLKK G
Sbjct: 362 NHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMYAADAKWEGASRMRRKMKGLGLKKQPG 421
Query: 652 QSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
S IE+ H+F +G+S + + EVLE ++ + +GCV +N
Sbjct: 422 FSSIEIDDCTHVFMAGDSAHVETAYIREVLELISSDLGLQGCVLEN 467
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 161/307 (52%), Gaps = 13/307 (4%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF-RFSFGQIV 158
W S + + + A K + MR GV TF ++ C G F + G ++
Sbjct: 14 WTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGC---GDFPSGSETLGDLL 70
Query: 159 HNHVLQMGFQGN-VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
H + ++G N V + ++GMY+K G++ + +FD + KN ++WN M G+ +
Sbjct: 71 HGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMIDGYMRSGQ 130
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
A++LF +M EP+ ++WT++++ + G EE + F M+ G++ AI
Sbjct: 131 VHNAVKLFDKMP----EPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVAIIA 186
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
L+ C +L A +G +H +V+ F++ V V N+LI +Y + G V+ A+ +F ++E++
Sbjct: 187 ALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRT 246
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
+VSWN++I +A G E++ F ++++ +PN ++++ + A + G +E L
Sbjct: 247 VVSWNSVIVGFAANGNAHESLVYFRKMQE----EGFKPNAVTFTGALTACSHVGLVDEGL 302
Query: 398 DLFRKMQ 404
F+ M+
Sbjct: 303 RFFQSMK 309
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y R G++ +A +F+ P + + W +++ V G +E AL + +M+ GV D
Sbjct: 125 YMRSGQVHNAVKLFDKMP---EPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDY 181
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
+ AC +G+ S G VH +V+ F+ NV + N LI +Y + G + + +
Sbjct: 182 VAIIAALNACTNLGAL----SLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARE 237
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+FDK+ + +SWN + GFA N + +L F++M+ EG +PN VT+T L++ + G
Sbjct: 238 VFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGL 297
Query: 253 LEETMDLFDMMRK 265
++E + F M++
Sbjct: 298 VDEGLRFFQSMKR 310
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 338 bits (867), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 223/796 (28%), Positives = 381/796 (47%), Gaps = 132/796 (16%)
Query: 27 NNSLLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVL-SIYARFGRLFDA 82
+++ L C +L+ C+++ +Q+H + G + A L +Y + G + +
Sbjct: 98 DSATLSC---VLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEG 154
Query: 83 RNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
VFE P K + + W S+L ++ + L+ +MR G+ + FTF V+ A
Sbjct: 155 IEVFEGMP---KKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAV 211
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
G+ GQ VH ++ G + +V + N L+ MYAK G + D+ +F+ + ++
Sbjct: 212 ASQGA----LDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDM 267
Query: 203 ISWNMMFSGFALNFDCD-GALELF-------------------------KRMEL------ 230
+SWN + +G LN +C+ AL+LF K++ L
Sbjct: 268 VSWNTLMAGLQLN-ECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHS 326
Query: 231 ----EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR------------GIEVGAEA 274
G T+L ++++CG L + +++F M I+ G
Sbjct: 327 CVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIP 386
Query: 275 IAVVL----------------SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG 318
+AVVL S + + IH VIK ++ FV AL+ Y
Sbjct: 387 LAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPFVGTALLASYS 446
Query: 319 KHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
K G + A ++F IE+K++V+W+A+++ +A+AG C+ A +F+
Sbjct: 447 KFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFN---------------- 490
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA-ESAALNIGREIHGH 437
KM + + N TIS ++ CA SA ++ GR+ H
Sbjct: 491 -----------------------KMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAI 527
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
++ + I V + L++MY + G ++ +VFE+ +DL++WNSMISGY +G A
Sbjct: 528 SIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKA 587
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
+ TF +M +G + DGV F+AV+ C+H GLV EG++ FD MVR+ +I P MEHYACMVD
Sbjct: 588 IETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVD 647
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
L RAG L E ++++MP A VW TLL +CR+HKN ++ + A ++ L + +
Sbjct: 648 LYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSST 707
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
Y+LLSNIYAA+G+W++ +VR + +KK AG SWI++K K+H F + + +
Sbjct: 708 YVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQI 767
Query: 678 CEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHRIVGFRNLKLGL 737
+ L+ + +++ G P+ +L ++ A++ K + L L
Sbjct: 768 YKKLKVIITRLKQDGYSPNTSFVLHDI-------------AEDQKEAMLVAHSERLALAF 814
Query: 738 RLLLSLRSTNGQLMKN 753
L+ + T Q++KN
Sbjct: 815 GLIATPPGTPLQIVKN 830
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 161/366 (43%), Gaps = 41/366 (11%)
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
+L +AR G + E +D F + R+ G+ V + ++ VL C + +G+ +H +K G
Sbjct: 70 VLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCG 129
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
+ G+V +L+ Y + G E +EVF
Sbjct: 130 HD---------------RGEVSAG---------------TSLVDMYMKCGSVCEGIEVFE 159
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
M + NV++W++++ A E + LF +M+ + N T + +LS
Sbjct: 160 --------GMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAV 211
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A AL++G+ +H V+ ++ V N L+NMY KCG +E+ VF +E +D+++WN
Sbjct: 212 ASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWN 271
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
++++G +N AL F E K + V+ C++ + R++ +++
Sbjct: 272 TLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKH 331
Query: 543 -FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
F + + + D + G L +A +I N W +++ C + + +A
Sbjct: 332 GFHLTGNV--MTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAV 389
Query: 602 AMASQI 607
+ S++
Sbjct: 390 VLFSRM 395
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 118/248 (47%), Gaps = 10/248 (4%)
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
R + + V+ +A G E LD F + V+ +S T+S +L C +G +
Sbjct: 61 RDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQ 120
Query: 434 IHGHVVRVSMNK-NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
+H V+ ++ + L++MYMKCG + EG VFE + KK+++TW S+++G
Sbjct: 121 LHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQ 180
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
+ +A F M G P+ F +VLSA + G ++ G+R+ V+ F +
Sbjct: 181 MHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK-FGCRSSVFVC 239
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL-----LNSCRMHKNTDVAEAMASQI 607
++++ + GL+++A + M + W TL LN C + E+ A+
Sbjct: 240 NSLMNMYAKCGLVEDAKSVFNWMETR-DMVSWNTLMAGLQLNECELEALQLFHESRAT-- 296
Query: 608 FGLITETT 615
G +T++T
Sbjct: 297 MGKMTQST 304
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 338 bits (867), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 221/775 (28%), Positives = 378/775 (48%), Gaps = 127/775 (16%)
Query: 32 DCFDHLLQQC---KTIHQLKQVHNQLIVTGA--NASAFLAARVLSIYARFG------RLF 80
+ + LLQ C + +H +Q+H +++ G + ++ +++ YA+ RLF
Sbjct: 1175 EIYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLF 1234
Query: 81 D---ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPL 137
RNVF W +I+ + G E+AL +++M++ GV D F P
Sbjct: 1235 HRLRVRNVFS------------WAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPN 1282
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGF------------------------------ 167
V++AC GS + G+ VH +VL+MGF
Sbjct: 1283 VLKAC---GSLQL-IGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSM 1338
Query: 168 -QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF---ALNFDC--DG- 220
+ NV N +I Y + G ++ +F +RV+ + + F + N D +G
Sbjct: 1339 VEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGK 1398
Query: 221 ---ALELFKRMELEG--------------------------LEPNFVTWTSLLSSHARCG 251
A+ + ++L+ LE + VTW L+SS+ +
Sbjct: 1399 QGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHH 1458
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
++ + +++ +MR + + ++ +LS A + +GK H + I+ E V V N
Sbjct: 1459 QVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVAN 1518
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK----- 366
++I +Y K + A+ +F E+++V WN L+ +YA+ GL EA+++F Q++
Sbjct: 1519 SIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPP 1578
Query: 367 ------------LDGGSME--------------RPNVISWSAVIGAFASNGRGEEALDLF 400
L G + +PN+I+W+ +I A +G G EA+ F
Sbjct: 1579 NVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFF 1638
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
+KMQ A + + +I+ +L C + +L GR IHG + R ++ V L++MY KC
Sbjct: 1639 QKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKC 1698
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
G ++E VF + K+L +N+MIS Y ++G ALA F+ + + G +PD + F ++L
Sbjct: 1699 GSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSIL 1758
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
SACSHAGLVNEG +F MV + + P MEHY C+V LL R G L EA ++ MP +P+
Sbjct: 1759 SACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPD 1818
Query: 581 AYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRIS 640
A++ G+LL +CR H ++ E ++ +F L +G+Y+ LSN YAA+GRW + + +R
Sbjct: 1819 AHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDL 1878
Query: 641 AKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
K +GL+K G SWI+ K+++F +G+ + + +L L +M G VP
Sbjct: 1879 MKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYAMLAMLLSEMRFMGYVP 1933
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 169/360 (46%), Gaps = 39/360 (10%)
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
+SS + G L+E++ L M ++G E +L C A H G+ IH ++K G
Sbjct: 1146 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNG- 1204
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
D+ F KN + E K L+ YA+ + AV +F +
Sbjct: 1205 -DF-FAKNEYV-------------------ETK-------LVVFYAKCDFPEVAVRLFHR 1236
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
L NV SW+A++G G E+AL F +MQ V ++ + +L C
Sbjct: 1237 LRVR--------NVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACG 1288
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
+ +G+ +HG+V+++ + V + L++MY KCG LE+ VF+ + +K+++TWNS
Sbjct: 1289 SLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNS 1348
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
MI GY NGL + A+ F +M G +P V + LSA ++ + EG++ + +
Sbjct: 1349 MIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILN- 1407
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
++ + +++ + GL+++A + M +E + W L++S H A M
Sbjct: 1408 SLDLDNILGSSIINFYSKVGLIEDAELVFSRM-LEKDVVTWNLLISSYVQHHQVGKALNM 1466
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 338 bits (867), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 304/560 (54%), Gaps = 43/560 (7%)
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+I+H H+++ +V + LI + + + ++F +++ N +N GF+ +
Sbjct: 32 KIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGS 91
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
D D + + + + GL P+ +T+ L+ + + G L+
Sbjct: 92 KDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLD--------------------- 130
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
MG HG +I+ GF+ V+V+N+L+ +Y GD+K A +F I
Sbjct: 131 --------------MGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISC 176
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
++VSW +++ Y ++G A ++F + M N+++WS +I +A N ++
Sbjct: 177 LDVVSWTSMVAGYIKSGDVTSARKLFDK--------MPEKNLVTWSVMISGYAKNSFFDK 228
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
A++L+ +Q V AN + +++ CA AL +G H +++R M N+++ L++
Sbjct: 229 AIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVD 288
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY +CG +++ VF+Q+ +D ++W ++I+G+ M+G E AL F M +AG P +
Sbjct: 289 MYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREIT 348
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
F AVLSACSH GLV G +F+ M R++RIEP++EHY CMVDLLGRAG L EA V M
Sbjct: 349 FTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEM 408
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
PM+PNA +WG LL +CR+HKN+++AE + L E +G Y+LLSNIYA + +WE+
Sbjct: 409 PMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVE 468
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
+R K +G+ K G + E+ K+H F+ G+ +++ + + EE+ ++ G
Sbjct: 469 NIRQMMKERGVVKPPGYTLFEMDGKVHKFTIGDKTHPEIQQIERMWEEILGKIRLAGYTG 528
Query: 696 DNDIILWEMMGKKNVKRIQR 715
+ND L+++ ++ I R
Sbjct: 529 NNDDALFDIDEEEKESNIHR 548
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 190/369 (51%), Gaps = 17/369 (4%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
L+ C T+ LK +H LI F A+ ++SI L A VF + ++
Sbjct: 21 FLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVF----YQIQNP 76
Query: 97 SL-LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+L ++NS +R + + + YV+ ++ G++ D T+P +++AC GS G
Sbjct: 77 NLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSL----DMG 132
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
H +++ GF +V++ N L+ MY+ +G + + +F ++ + +SW M +G+ +
Sbjct: 133 IQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKS 192
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
D A +LF +M E N VTW+ ++S +A+ ++ ++L+ +++ G+ +
Sbjct: 193 GDVTSARKLFDKMP----EKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVM 248
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
V++ CA L A +G+ H ++++ + + AL+ +Y + G + A +F ++
Sbjct: 249 VSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPG 308
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
++ +SW LI +A G ++A+E FS++EK + P I+++AV+ A + G E
Sbjct: 309 RDALSWTTLIAGFAMHGYAEKALEYFSRMEK----AGLTPREITFTAVLSACSHGGLVER 364
Query: 396 ALDLFRKMQ 404
L+LF M+
Sbjct: 365 GLELFESMK 373
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 106/193 (54%), Gaps = 7/193 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y + G + AR +F+ P + + + W+ ++ N ++ A++LY ++ GV +
Sbjct: 189 YIKSGDVTSARKLFDKMP---EKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANE 245
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
VI +C +G+ G+ H+++L+ N+ + L+ MYA+ G + +
Sbjct: 246 TVMVSVIASCAHLGAL----ELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIW 301
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+FD++ ++ +SW + +GFA++ + ALE F RME GL P +T+T++LS+ + G
Sbjct: 302 VFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGL 361
Query: 253 LEETMDLFDMMRK 265
+E ++LF+ M++
Sbjct: 362 VERGLELFESMKR 374
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
L C + L I IH H++R ++ + L+++ + L+ VF QI+ +
Sbjct: 21 FLESCTTLSHLKI---IHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQIQNPN 77
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
L +NS I G+ + + + + + G PD + + ++ AC+ G ++ G +
Sbjct: 78 LFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQAHG 137
Query: 538 MMVR 541
++R
Sbjct: 138 QIIR 141
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 338 bits (867), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 200/659 (30%), Positives = 330/659 (50%), Gaps = 82/659 (12%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
L QV+ QLIV+G + FL + ++ FG + A F + LLWN+I++
Sbjct: 17 HLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVS---EPDILLWNAIIK 73
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
+ + +++Y+ M+ V + FTF V++AC G G+ +H +
Sbjct: 74 GYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKAC---GGTSVE-GIGKQIHGQTFKY 129
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
GF NV + N L+ MYAK GQ+S + +FDK+
Sbjct: 130 GFGSNVFVQNSLVSMYAKFGQISYARIVFDKLH--------------------------- 162
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
+ V+WTS++S + + G E +++F MR+ ++ A+ V++ ++
Sbjct: 163 --------DRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNV 214
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
GK IHG V K G E + +L +Y K G V+VA+ F+
Sbjct: 215 EDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNR------------- 261
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
ME+PN+I W+A+I +A+NG GEEA+ LFR+M
Sbjct: 262 --------------------------MEKPNLILWNAMISGYANNGYGEEAIKLFREMIT 295
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
+ +S+T+ + A+ +L + R + G++ + + V GL++MY KCG +
Sbjct: 296 KNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYL 355
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
VF+++ KD++ W+ MI GYG++G G+ A+ + EM +AG P+ F+ +L+AC +
Sbjct: 356 ARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKN 415
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
+GLV EG +F +M + IEP +HY+C+VDLLGRAG L +A D + +MP++P VWG
Sbjct: 416 SGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWG 474
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
LL++C++H+ + E A Q+F L TG Y+ LSN+YA++ W A VR+ KG
Sbjct: 475 ALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKG 534
Query: 646 LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
L K G S IE+ + F G+ K + E L+ L +++ G VP + +L ++
Sbjct: 535 LNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDL 593
>gi|449467189|ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Cucumis sativus]
Length = 711
Score = 338 bits (867), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 205/648 (31%), Positives = 340/648 (52%), Gaps = 60/648 (9%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+L+ YA + AR VF P D +S +N+++ + + A +L+ M +
Sbjct: 84 LLTAYAENSEINKAREVFNKIP-DPNVAS--YNAMITAYHRRNMVDEAFELFSSMPQRNS 140
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ + A F + + IV ++VL I Y+K+G++
Sbjct: 141 VSYATMITGFVHAGMFDMAEKLHREKPVIVSSNVL--------------INGYSKVGRVE 186
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
D+ ++FD + K+ +SW+ M SG A +LF +M + N VTWT ++ +
Sbjct: 187 DAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMP----DRNVVTWTLMIDGYM 242
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ L++ LF MR+ G+EV A + V+L C G IHG V+ GF+ +
Sbjct: 243 KMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAY 302
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
+ N++I +Y + + A F + +K+IV+WN+LIT Y ++G ++AV +F
Sbjct: 303 LANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFE------ 356
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV------- 421
+M + +V+SW+ +I FAS GR +E + LF+ M +A + ISGL+S+
Sbjct: 357 --NMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGLVSIEEYEIAF 414
Query: 422 -------------------CAESAA-----LNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
C SA LN G +IH V ++SM ++ +QN L++MY
Sbjct: 415 HWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNSLVSMY 474
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG +++ +F I+ +++ +N++I+G NGLG+ AL F +M + P+ + F+
Sbjct: 475 SKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNHITFL 534
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
VLSAC H GLV EGRR FD+M + I+P+ +HYACMVDLL RAG+ EA +V +MP
Sbjct: 535 GVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSLVSSMPF 594
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
+P+ VWG +L + H DVAE A +F L + Y++LSN+++ SG +
Sbjct: 595 DPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVILSNLHSISGDERKHELI 654
Query: 638 RISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
R+ K++GLKK G SWI +K ++H+F +G+ ++K + E++ LA
Sbjct: 655 RLMKKSRGLKKSPGCSWIILKDEVHLFHAGHQSIKNIKEMTEIIYALA 702
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 178/374 (47%), Gaps = 44/374 (11%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N I + G + ++ +F+++ KN +SW + + +A N + + A E+F ++ +
Sbjct: 51 NSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIP----D 106
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
PN ++ ++++++ R ++E +LF M +R + +I
Sbjct: 107 PNVASYNAMITAYHRRNMVDEAFELFSSMPQRN-------------------SVSYATMI 147
Query: 295 HGFVIKGGFE---------DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
GFV G F+ + N LI Y K G V+ A +F + EK++VSW+++I
Sbjct: 148 TGFVHAGMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMI 207
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+ G EA ++F + M NV++W+ +I + ++ LF M+
Sbjct: 208 SGLCRVGKIVEARKLFDK--------MPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRR 259
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
V N+ T++ LL C G +IHG V+ + + + + N ++ MY +C ++
Sbjct: 260 EGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDA 319
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
F+ + KKD++TWNS+I+GY +G E A+ FE M + D V++ ++ +
Sbjct: 320 AAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQK----DVVSWTTLICGFAS 375
Query: 526 AGLVNEGRRIFDMM 539
G ++E +F MM
Sbjct: 376 EGRIDEFIGLFQMM 389
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 154/329 (46%), Gaps = 33/329 (10%)
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
N+ I G++G +K A+++F+ + KN VSW AL+T+YAE ++A EVF+++
Sbjct: 51 NSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPD---- 106
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
PNV S++A+I A+ +EA +LF M V+ + I+G + A +
Sbjct: 107 ----PNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMFDMAEKL 162
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
RE I+ N L+N Y K G +E+ +F+ + +KD+++W+SMISG
Sbjct: 163 HRE----------KPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCR 212
Query: 491 NGLGENALATFEEMIEAGFKPDG--VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
G A F++M PD V + ++ + +G +F M RE +E
Sbjct: 213 VGKIVEARKLFDKM------PDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRRE-GVEVN 265
Query: 549 MEHYACMVDLLG---RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMAS 605
+++ G R G + +V ++ + +AY+ +++ M+ +A A
Sbjct: 266 ATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIIT---MYSRCYSIDAAAK 322
Query: 606 QIFGLITETTGSYMLLSNIYAASGRWEDA 634
Q ++ + ++ L Y SG E A
Sbjct: 323 QFDLMVKKDIVTWNSLITGYVQSGNLEKA 351
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/245 (18%), Positives = 101/245 (41%), Gaps = 68/245 (27%)
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
GC++E +F ++ K+ ++W ++++ Y N
Sbjct: 61 GCIKEAESIFNRMPNKNTVSWTALLTAYAEN----------------------------- 91
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
+N+ R +F+ + +P + Y M+ R ++ EA ++ +MP + N
Sbjct: 92 ------SEINKAREVFNKIP-----DPNVASYNAMITAYHRRNMVDEAFELFSSMP-QRN 139
Query: 581 AYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRIS 640
+ + T++ D+AE + + +++ +L N Y+ GR EDA ++
Sbjct: 140 SVSYATMITGFVHAGMFDMAEKLHREKPVIVSSN-----VLINGYSKVGRVEDAVRI--- 191
Query: 641 AKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
G+ + SW +S+ S L V +++E A ++ +K +PD +++
Sbjct: 192 --FDGMAEKDVVSW-------------SSMISGLCRVGKIVE--ARKLFDK--MPDRNVV 232
Query: 701 LWEMM 705
W +M
Sbjct: 233 TWTLM 237
>gi|449530420|ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like, partial [Cucumis sativus]
Length = 719
Score = 338 bits (867), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 205/648 (31%), Positives = 340/648 (52%), Gaps = 60/648 (9%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+L+ YA + AR VF P D +S +N+++ + + A +L+ M +
Sbjct: 92 LLTAYAENSEINKAREVFNKIP-DPNVAS--YNAMITAYHRRNMVDEAFELFSSMPQRNS 148
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ + A F + + IV ++VL I Y+K+G++
Sbjct: 149 VSYATMITGFVHAGMFDMAEKLHREKPVIVSSNVL--------------INGYSKVGRVE 194
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
D+ ++FD + K+ +SW+ M SG A +LF +M + N VTWT ++ +
Sbjct: 195 DAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMP----DRNVVTWTLMIDGYM 250
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ L++ LF MR+ G+EV A + V+L C G IHG V+ GF+ +
Sbjct: 251 KMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAY 310
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
+ N++I +Y + + A F + +K+IV+WN+LIT Y ++G ++AV +F
Sbjct: 311 LANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFE------ 364
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV------- 421
+M + +V+SW+ +I FAS GR +E + LF+ M +A + ISGL+S+
Sbjct: 365 --NMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAVISGLVSIEEYEIAF 422
Query: 422 -------------------CAESAA-----LNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
C SA LN G +IH V ++SM ++ +QN L++MY
Sbjct: 423 HWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNSLVSMY 482
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG +++ +F I+ +++ +N++I+G NGLG+ AL F +M + P+ + F+
Sbjct: 483 SKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNHITFL 542
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
VLSAC H GLV EGRR FD+M + I+P+ +HYACMVDLL RAG+ EA +V +MP
Sbjct: 543 GVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSLVSSMPF 602
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
+P+ VWG +L + H DVAE A +F L + Y++LSN+++ SG +
Sbjct: 603 DPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVILSNLHSISGDERKHELI 662
Query: 638 RISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
R+ K++GLKK G SWI +K ++H+F +G+ ++K + E++ LA
Sbjct: 663 RLMKKSRGLKKSPGCSWIILKDEVHLFHAGHQSIKNIKEMTEIIYALA 710
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 178/374 (47%), Gaps = 44/374 (11%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N I + G + ++ +F+++ KN +SW + + +A N + + A E+F ++ +
Sbjct: 59 NSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIP----D 114
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
PN ++ ++++++ R ++E +LF M +R + +I
Sbjct: 115 PNVASYNAMITAYHRRNMVDEAFELFSSMPQRN-------------------SVSYATMI 155
Query: 295 HGFVIKGGFE---------DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
GFV G F+ + N LI Y K G V+ A +F + EK++VSW+++I
Sbjct: 156 TGFVHAGMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMI 215
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+ G EA ++F + M NV++W+ +I + ++ LF M+
Sbjct: 216 SGLCRVGKIVEARKLFDK--------MPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRR 267
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
V N+ T++ LL C G +IHG V+ + + + + N ++ MY +C ++
Sbjct: 268 EGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDA 327
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
F+ + KKD++TWNS+I+GY +G E A+ FE M + D V++ ++ +
Sbjct: 328 AAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQK----DVVSWTTLICGFAS 383
Query: 526 AGLVNEGRRIFDMM 539
G ++E +F MM
Sbjct: 384 EGRIDEFIGLFQMM 397
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 154/329 (46%), Gaps = 33/329 (10%)
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
N+ I G++G +K A+++F+ + KN VSW AL+T+YAE ++A EVF+++
Sbjct: 59 NSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPD---- 114
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
PNV S++A+I A+ +EA +LF M V+ + I+G + A +
Sbjct: 115 ----PNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSYATMITGFVHAGMFDMAEKL 170
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
RE I+ N L+N Y K G +E+ +F+ + +KD+++W+SMISG
Sbjct: 171 HRE----------KPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCR 220
Query: 491 NGLGENALATFEEMIEAGFKPDG--VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
G A F++M PD V + ++ + +G +F M RE +E
Sbjct: 221 VGKIVEARKLFDKM------PDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRRE-GVEVN 273
Query: 549 MEHYACMVDLLG---RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMAS 605
+++ G R G + +V ++ + +AY+ +++ M+ +A A
Sbjct: 274 ATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIIT---MYSRCYSIDAAAK 330
Query: 606 QIFGLITETTGSYMLLSNIYAASGRWEDA 634
Q ++ + ++ L Y SG E A
Sbjct: 331 QFDLMVKKDIVTWNSLITGYVQSGNLEKA 359
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 338 bits (867), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 218/701 (31%), Positives = 356/701 (50%), Gaps = 95/701 (13%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
+R G++ +AR +F++ C S S+ WNS++ +N + +A KL+ +M ++
Sbjct: 28 SRIGKIHEARKLFDS----CDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIIS-- 81
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
N L+ Y K G++ ++ K
Sbjct: 82 -----------------------------------------WNGLVSGYMKNGEIDEARK 100
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+FD + +N +SW + G+ N D A LF +M E N V+WT +L + GR
Sbjct: 101 VFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP----EKNKVSWTVMLIGFLQDGR 156
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
+++ L++M+ + +++ +C + D ++ E V
Sbjct: 157 IDDACKLYEMIPDKD---NIARTSMIHGLCKEGRVDEAREIFDEMS-----ERSVITWTT 208
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE------- 365
++ YG++ V A+ +F + EK VSW +++ Y + G ++A E+F +
Sbjct: 209 MVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIAC 268
Query: 366 --KLDG--------------GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+ G SM+ N SW VI NG EALDLF MQ V
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
T+ +LSVCA A+L+ G+++H +VR + ++ V + L+ MY+KCG L + L+
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG-FKPDGVAFVAVLSACSHAGL 528
F++ KD+I WNS+ISGY +GLGE AL F EM +G KP+ V FVA LSACS+AG+
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
V EG +I++ M F ++P HYACMVD+LGRAG EA +++ +M +EP+A VWG+LL
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
+CR H DVAE A ++ + E +G+Y+LLSN+YA+ GRW D A++R KT+ ++K
Sbjct: 509 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 568
Query: 649 VAGQSWIEVKRKIHMFSSGN-SLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGK 707
G SW EV+ K+H F+ G + + +++ ++L+EL + G PD L
Sbjct: 569 SPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYAL------ 622
Query: 708 KNVKRIQRIRADNIKSKHRIVGFRNLKLG----LRLLLSLR 744
+V +++ + S+ V + LKL +R++ +LR
Sbjct: 623 HDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLR 663
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 184/386 (47%), Gaps = 60/386 (15%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK--- 125
++S Y + G + +AR VF+ P + + + W ++++ V NG + A L+ KM +
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMP---ERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNK 141
Query: 126 -------LGVLGDGFTFPLVIRACKF--MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNE 176
+G L DG + ACK M + + ++H + I +E
Sbjct: 142 VSWTVMLIGFLQDG----RIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDE 197
Query: 177 -----------LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
++ Y + ++ D+ K+FD + K +SW M G+ N + A ELF
Sbjct: 198 MSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELF 257
Query: 226 KRMELEGL---------------------------EPNFVTWTSLLSSHARCGRLEETMD 258
+ M ++ + E N +W +++ H R G E +D
Sbjct: 258 EVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALD 317
Query: 259 LFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG 318
LF +M+K+G+ + +LSVCA LA+ H GK +H +++ F+ V+V + L+ +Y
Sbjct: 318 LFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI 377
Query: 319 KHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
K G++ ++ +F K+I+ WN++I+ YA GL +EA++VF ++ L G + +PN +
Sbjct: 378 KCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEM-PLSGST--KPNEV 434
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQ 404
++ A + A + G EE L ++ M+
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESME 460
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/522 (21%), Positives = 220/522 (42%), Gaps = 116/522 (22%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N I +++G++ ++ KLFD K+ SWN M +G+ N A +LF M +
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP----D 76
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI--AVVLSVCADLAADHMGK 292
N ++W L+S + + G ++E +FD+M +R + V A+ V + D+A K
Sbjct: 77 RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV-VSWTALVKGYVHNGKVDVAESLFWK 135
Query: 293 VIH-----------GFVIKGGFEDYV-----------FVKNALICVYGKHGDVKVAQNLF 330
+ GF+ G +D + ++I K G V A+ +F
Sbjct: 136 MPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIF 195
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
E+ E+++++W ++T Y + D+A ++F M +SW++++ + N
Sbjct: 196 DEMSERSVITWTTMVTGYGQNNRVDDARKIFD--------VMPEKTEVSWTSMLMGYVQN 247
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
GR E+A +LF M + V+A + ISGL G++
Sbjct: 248 GRIEDAEELFEVMPVKPVIACNAMISGL------------GQK----------------- 278
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
G + + VF+ +++++ +W ++I + NG AL F M + G +
Sbjct: 279 ----------GEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVR-EFRIE----------------------- 546
P +++LS C+ ++ G+++ +VR +F ++
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 547 ----PQME--HYACMVDLLGRAGLLQEASDIVKNMPM----EPNAYVWGTLLNSCR---- 592
P + + ++ GL +EA + MP+ +PN + L++C
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
+ + + E+M S +FG + T Y + ++ +GR+ +A
Sbjct: 449 VEEGLKIYESMES-VFG-VKPITAHYACMVDMLGRAGRFNEA 488
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 132/301 (43%), Gaps = 70/301 (23%)
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
N IT + G EA ++F S + ++ SW++++ + +N +A LF
Sbjct: 21 NVRITHLSRIGKIHEARKLFD--------SCDSKSISSWNSMVAGYFANLMPRDARKLFD 72
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+M ++NI+ NGL++ YMK G
Sbjct: 73 EMP---------------------------------------DRNIISWNGLVSGYMKNG 93
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
++E VF+ + ++++++W +++ GY NG + A + F +M E + V++ +L
Sbjct: 94 EIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLI 149
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA--CMVDLLGRAGLLQEASDIVKNMPMEP 579
G +++ ++++M+ P ++ A M+ L + G + EA +I M E
Sbjct: 150 GFLQDGRIDDACKLYEMI-------PDKDNIARTSMIHGLCKEGRVDEAREIFDEMS-ER 201
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI---TETTGSYMLLSNIYAASGRWEDAAK 636
+ W T++ + D A +IF ++ TE + + ML+ Y +GR EDA +
Sbjct: 202 SVITWTTMVTGYGQNNRVDDAR----KIFDVMPEKTEVSWTSMLMG--YVQNGRIEDAEE 255
Query: 637 V 637
+
Sbjct: 256 L 256
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 105/227 (46%), Gaps = 11/227 (4%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
++H KQVH QL+ + ++A+ ++++Y + G L ++ +F+ P ++WNS
Sbjct: 346 SLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP---SKDIIMWNS 402
Query: 103 ILRVNVSNGLYENALKLYVKMRKLG-VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
I+ S+GL E ALK++ +M G + TF + AC + G +I +
Sbjct: 403 IISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGL---KIYESM 459
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDG 220
G + ++ M + G+ +++ ++ D + V+ + W + + D
Sbjct: 460 ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDV 519
Query: 221 ALELFKRMELEGLEP-NFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
A F +L +EP N T+ L + +A GR + +L +M+ R
Sbjct: 520 A--EFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTR 564
>gi|357516987|ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522804|gb|AET03258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1002
Score = 338 bits (867), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 236/796 (29%), Positives = 394/796 (49%), Gaps = 132/796 (16%)
Query: 4 SLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLK---QVHNQLIVTGAN 60
S L Q Q +P P D + LLQ C L Q+H LI G++
Sbjct: 90 STLSQLPQHTPIGP--------------DIYGELLQGCVYARDLSLGLQIHAHLIKKGSS 135
Query: 61 ASA--FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL-WNSILRVNVSNGLYENAL 117
S F+ ++++ +YA+ A + F K+ +L + +I+ + NGLY+ AL
Sbjct: 136 YSTNEFVESKLVILYAKCNLTRVAVHFFRNV---VKNQNLFSYAAIVGLQARNGLYKEAL 192
Query: 118 KLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG--FQGNVHIVN 175
YV+M + G D F P ++AC G R+ FG+ +H V++MG F G V++
Sbjct: 193 LSYVEMMEKGFCPDNFVVPNGLKAC---GGLRW-IGFGRGIHGFVVKMGNEFDGCVYVAT 248
Query: 176 ELIGMYAKMGQMSDSFK---------------------------------LFDKVRVK-- 200
L+ MY K G + D+ K LF+K+R +
Sbjct: 249 SLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGG 308
Query: 201 ---NYISWNMMFS---------------------GFALNFDCDGALELF--KRMELEGLE 234
+ +S + FS GF LN+ ++ F K +E +E
Sbjct: 309 VEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVE 368
Query: 235 PNF---------VTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCAD 284
F VTW ++SS+ + G E+ +++ MR+ + ++ +L++ AD
Sbjct: 369 LVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAAD 428
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS-EIEEKNIVSWNA 343
+GK +HGF I+ F + V + ++ +Y K G + A+ +F ++K+IV WN
Sbjct: 429 TRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNT 488
Query: 344 LITSYAEAGLCDEAVEVFSQLEK------------------LDGGSME------------ 373
++ + AE GL EA+++F Q++ +G +E
Sbjct: 489 MLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSG 548
Query: 374 -RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
PN+I+W+ +I A NG G EA +F++MQ A + NS++I+ LS C A LN GR
Sbjct: 549 VTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGR 608
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
IHG+V+R M+ ++ + +++MY KCG L++ VF K+L +N+MIS Y +G
Sbjct: 609 SIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHG 668
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
ALA F+E+++ G PD + F +VLSACSH L+ EG +F MV E +++P +HY
Sbjct: 669 KSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHY 728
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
C+V LL G L EA I+ MP P+A++ G+LL +C + T++A +A + +
Sbjct: 729 GCLVKLLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQNHETELANYIAKWLLKVEP 788
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
G+Y+ LSN+YAA G+W++ + +R K KGLKK+ G SWIEV +++++F + +
Sbjct: 789 NNPGNYVALSNVYAALGKWDEVSNIRGFMKEKGLKKIPGCSWIEVGQELNVFIASDKSHP 848
Query: 673 DLKNVCEVLEELALQM 688
+ + + ++L+ L +M
Sbjct: 849 EKEEIYKILDLLGFEM 864
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 200/659 (30%), Positives = 330/659 (50%), Gaps = 82/659 (12%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
L QV+ QLIV+G + FL + ++ FG + A F + LLWN+I++
Sbjct: 2 HLDQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVS---EPDILLWNAIIK 58
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
+ + +++Y+ M+ V + FTF V++AC G G+ +H +
Sbjct: 59 GYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKAC---GGTSVE-GIGKQIHGQTFKY 114
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
GF NV + N L+ MYAK GQ+S + +FDK+
Sbjct: 115 GFGSNVFVQNSLVSMYAKFGQISYARIVFDKLH--------------------------- 147
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
+ V+WTS++S + + G E +++F MR+ ++ A+ V++ ++
Sbjct: 148 --------DRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNV 199
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
GK IHG V K G E + +L +Y K G V+VA+ F+
Sbjct: 200 EDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNR------------- 246
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
ME+PN+I W+A+I +A+NG GEEA+ LFR+M
Sbjct: 247 --------------------------MEKPNLILWNAMISGYANNGYGEEAIKLFREMIT 280
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
+ +S+T+ + A+ +L + R + G++ + + V GL++MY KCG +
Sbjct: 281 KNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYL 340
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
VF+++ KD++ W+ MI GYG++G G+ A+ + EM +AG P+ F+ +L+AC +
Sbjct: 341 ARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKN 400
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
+GLV EG +F +M + IEP +HY+C+VDLLGRAG L +A D + +MP++P VWG
Sbjct: 401 SGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWG 459
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
LL++C++H+ + E A Q+F L TG Y+ LSN+YA++ W A VR+ KG
Sbjct: 460 ALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKG 519
Query: 646 LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
L K G S IE+ + F G+ K + E L+ L +++ G VP + +L ++
Sbjct: 520 LNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDL 578
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 178/491 (36%), Positives = 279/491 (56%), Gaps = 23/491 (4%)
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
++ LF R PN WT ++++HA + + M I+ A ++ +L
Sbjct: 74 SVTLFHRTP----NPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLK 129
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
C H + +H IK G +++V L+ Y + GDV AQ LF + E+++VS
Sbjct: 130 ACTL----HPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVS 185
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
+ A++T YA+ G+ EA +F M +V+ W+ +I +A +G EAL F
Sbjct: 186 YTAMLTCYAKHGMLPEARVLFE--------GMGMKDVVCWNVMIDGYAQHGCPNEALVFF 237
Query: 401 RKMQLA-------KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
RKM + KV N +T+ +LS C + AL G+ +H +V + N+ V L
Sbjct: 238 RKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTAL 297
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY KCG LE+ VF+ +E KD++ WNSMI GYG++G + AL F EM G KP
Sbjct: 298 VDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSD 357
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
+ FVAVL+AC+HAGLV++G +FD M + +EP++EHY CMV+LLGRAG +QEA D+V+
Sbjct: 358 ITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVR 417
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
+M +EP+ +WGTLL +CR+H N + E +A + ++G+Y+LLSN+YAA+ W
Sbjct: 418 SMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVG 477
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
AKVR K G++K G S IEVK ++H F +G+ K++ +LE++ ++ +
Sbjct: 478 VAKVRSMMKGSGVEKEPGCSSIEVKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHY 537
Query: 694 VPDNDIILWEM 704
P D +L ++
Sbjct: 538 TPKTDAVLHDI 548
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 198/460 (43%), Gaps = 75/460 (16%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
L+ K+ H L Q+H L+ G + L ++ YA G L + +F P +
Sbjct: 29 LIDNSKSTHHLLQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTP---NPN 85
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
LW I+ + L+ +AL Y +M + + FT +++AC + +
Sbjct: 86 VFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACTLHPA--------R 137
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
VH+H ++ G ++++ L+ YA+ G ++ + KLFD + ++ +S+ M + +A +
Sbjct: 138 AVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHG 197
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF----------DMMRKR 266
A LF+ M ++ + V W ++ +A+ G E + F + R
Sbjct: 198 MLPEARVLFEGMGMK----DVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVR 253
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
E+ + VLS C + A GK +H +V G + V V AL+ +Y K G ++ A
Sbjct: 254 PNEI---TVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDA 310
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL---------------------- 364
+ +F +E K++V+WN++I Y G DEA+++F ++
Sbjct: 311 RKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHA 370
Query: 365 -----------EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
DG ME P V + ++ GR +EA DL R M+ V + V
Sbjct: 371 GLVSKGWEVFDSMKDGYGME-PKVEHYGCMVNLLGRAGRMQEAYDLVRSME---VEPDPV 426
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
LL C + +++G EI ILV NGL
Sbjct: 427 LWGTLLWACRIHSNVSLGEEI----------AEILVSNGL 456
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 170/456 (37%), Positives = 261/456 (57%), Gaps = 55/456 (12%)
Query: 295 HGFVIKGGFEDYVFVKNALICVYGK-------------------------------HGDV 323
H V+K G + FV NALI Y K G+V
Sbjct: 152 HAHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEV 211
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD-------------GG 370
A+++F E+ EK+ VSWN ++ YA+AG ++A E+F ++ + G
Sbjct: 212 DAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYCKKG 271
Query: 371 SME----------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
ME N+++W+ ++ A A G EEA LF +M A + + + + +L+
Sbjct: 272 DMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVSILA 331
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE-QIEKKDLI 479
CAES +L +G+ IH HV + ++++ LV N L++M+ KCGC+ +F+ +I +KDL+
Sbjct: 332 ACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDLV 391
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN +I G+ M+G GE AL F +M + GF PD V + VLSAC+H GLV EGRR F M
Sbjct: 392 SWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANM 451
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
++ I+PQ+EHY CMVDLLGR GL++EA D++K MP EPN +WG+LL++CR+HKN +
Sbjct: 452 ETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEY 511
Query: 600 AEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKR 659
AE +++ L + G+Y +LSNIYA +G+W D AK R+ K G +K AG SWIE+
Sbjct: 512 AELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIELNE 571
Query: 660 KIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
H F+ G+ + + ++++ L+ ++ GCVP
Sbjct: 572 AFHEFTVGDRKHPESDQISDMIDRLSSHVKFVGCVP 607
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 193/428 (45%), Gaps = 81/428 (18%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA------PFDCKSSS 97
+ ++++H QL+ G + A+++++ YA R+ R VF A PF S++
Sbjct: 39 LRHVQELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSAAVALPNSPFP-SSTT 97
Query: 98 LLWNSILRVNVSNGLYENALKLY--VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
LL ++LR N L AL ++ V +R+ G FT+ +I+A G R +
Sbjct: 98 LLTKTLLRAYALNSLPHAALAVFLDVPLRQRGT----FTYSFLIKALAAAGLTPVRGA-- 151
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV---------------- 199
H HV+++G + + N LI Y+K +SD+ K+FD++
Sbjct: 152 ---HAHVVKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQ 208
Query: 200 ---------------KNYISWNMMFSGFALNFDCDGALELFKRMELEGL----------- 233
K+ +SWN M G+A + + A ELF+RM +
Sbjct: 209 GEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTVVSAYC 268
Query: 234 ----------------EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
N VTWT ++S+ A+ G +EE LF M IE+ A+
Sbjct: 269 KKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDVIAVVS 328
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF-SEIEEK 336
+L+ CA+ + +GK IH V + V NAL+ ++ K G V A +F +EI EK
Sbjct: 329 ILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEK 388
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
++VSWN +I +A G ++A+E+F+Q+++ P+ ++ V+ A G EE
Sbjct: 389 DLVSWNIIIGGFAMHGPGEKALELFAQMKQQGF----HPDAVTLINVLSACTHMGLVEEG 444
Query: 397 LDLFRKMQ 404
F M+
Sbjct: 445 RRFFANME 452
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 13/248 (5%)
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
LI SYA VFS L + ++ A+A N AL +F +
Sbjct: 64 LIASYALLRRVPACRCVFSAAVALPNSPFPSSTTLLTKTLLRAYALNSLPHAALAVFLDV 123
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
L + + T S L+ A +A L R H HVV++ ++ V N L++ Y K L
Sbjct: 124 PLRQ--RGTFTYSFLIKALA-AAGLTPVRGAHAHVVKLGSAEDTFVGNALIDAYSKNQGL 180
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
+ VF+++ +D+++WN+ ++ G + A + F+EM E D V++ +L
Sbjct: 181 SDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAARSMFDEMPEK----DTVSWNTMLDGY 236
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
+ AG + +F M + ++ +V + G ++ A I MP + N
Sbjct: 237 AKAGEAEKAFELFQRMPGRNVVS-----WSTVVSAYCKKGDMEMARVIFDKMPAK-NLVT 290
Query: 584 WGTLLNSC 591
W ++++C
Sbjct: 291 WTIMVSAC 298
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 207/654 (31%), Positives = 326/654 (49%), Gaps = 93/654 (14%)
Query: 34 FDHLLQQCKTI----HQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLF-DARNVFET 88
+ LLQ C + H L Q+H +I +G F+ +L++Y + G F + R VF+
Sbjct: 62 YASLLQTCTKVLAFNHGL-QIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDG 120
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
+ W S++ V G N+L+L+ KM GV + FT VI+AC +G
Sbjct: 121 LFV---KDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDL 177
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
+ G+I H VL GF N I + LI M+ + + D+ +LFD++
Sbjct: 178 KL----GRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDEL----------- 222
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRG 267
LEP+ + WTS++S+ R +E + F M R G
Sbjct: 223 ------------------------LEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHG 258
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
+ VL+ C +L GK +H VI GF V V+++L+ +YGK
Sbjct: 259 MCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGK-------- 310
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
G E+ +F + M N +SWSA++G +
Sbjct: 311 -----------------------CGSVGESQRIFDR--------MPIKNSVSWSALLGGY 339
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
NG + + +FRKM+ + +L CA AA+ G+E+H +R +++
Sbjct: 340 CQNGDFKSVIQIFRKMEKVDLYC----FGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDV 395
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
+V++ L+++Y KCGC+E +F+Q+ ++LITWNSMI G+ NG GE AL F +M++
Sbjct: 396 IVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKE 455
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
G KPD ++F+ +L ACSH GLV+EGR F M +++ I+ +EHY+CMVDLLGRAGLL+E
Sbjct: 456 GIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEE 515
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A +++ ++ +W LL +C N ++AE +A ++ L + SY+LL+N+Y A
Sbjct: 516 AEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKA 575
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI-HMFSSGNSLQSDLKNVCEV 680
GRW DA ++R K +G+ K+ G+SWIE K + F NSL N +V
Sbjct: 576 VGRWNDALRIRRLMKDRGVNKMPGKSWIETKNNLGSSFDFENSLVPGESNFLDV 629
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 153/343 (44%), Gaps = 45/343 (13%)
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ G L + L + I A +L C + A + G IH VIK G E F
Sbjct: 36 KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRF 95
Query: 309 VKNALICVYGKHG-DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
V N+L+ +Y K G D + +F + K+++SW ++I+ Y G ++E+F
Sbjct: 96 VGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELF------ 149
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
W KM V N+ T+S ++ C+E
Sbjct: 150 ------------W---------------------KMLAYGVEPNAFTLSAVIKACSELGD 176
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L +GR HG V+ + N ++ + L++M+ + L++ +F+++ + D I W S+IS
Sbjct: 177 LKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISA 236
Query: 488 YGMNGLGENALATFEEMI-EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRI 545
N + AL F M + G PDG F VL+AC + G + +G+ + ++ F
Sbjct: 237 LTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCG 296
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+E + +VD+ G+ G + E+ I MP++ N+ W LL
Sbjct: 297 NVVVE--SSLVDMYGKCGSVGESQRIFDRMPIK-NSVSWSALL 336
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 5/209 (2%)
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
AL L + + ++ A V + LL C + A N G +IH HV++ + + V N LL
Sbjct: 43 ALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLT 102
Query: 456 MYMKCGC-LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+Y K G E VF+ + KD+I+W SMISGY G N+L F +M+ G +P+
Sbjct: 103 LYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAF 162
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
AV+ ACS G + G RIF +V + + ++D+ GR L +A +
Sbjct: 163 TLSAVIKACSELGDLKLG-RIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDE 221
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+ +EP+A W +++++ + +N EA+
Sbjct: 222 L-LEPDAICWTSIISA--LTRNDFFDEAL 247
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 338 bits (866), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 190/603 (31%), Positives = 308/603 (51%), Gaps = 87/603 (14%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
+N+I+ ++NG E + Y KMR GV+ D FTFP I+AC + + +H
Sbjct: 27 FNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIK-------KIH 79
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+ + G + +V I + L+ Y K G M + F+++ +++ + WN M
Sbjct: 80 GLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAM----------- 128
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
++ +A+ G+ E ++ F M + + +L
Sbjct: 129 ------------------------VNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGIL 164
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
SV A + + G++IHGF +K G++ V V N+LI +YGK
Sbjct: 165 SVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGK-------------------- 204
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
++A+E+F + + D + SW+++ G + L L
Sbjct: 205 -----------CKCIEDALEIFEMMREKD--------IFSWNSIXSVHEQCGDHDGTLRL 245
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN------ILVQNGL 453
+M A + + VT++ +L C+ AAL GREIHG+++ + K+ +L++N +
Sbjct: 246 LDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAV 305
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY KCG + + HLVFE++ KD+ +WN MI GYGM+G G AL F M E KPD
Sbjct: 306 IDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDE 365
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
V FV VLSACSHAG V++GR M ++ + P +EHY C++D+LGRAG L EA ++
Sbjct: 366 VTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELAL 425
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
MP+E N VW LL +CR+HK+ +AE A ++F L E GSY+L+SN+Y A GR+E+
Sbjct: 426 TMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEE 485
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
+VR + + + ++K G SWIE+K +H+F S + + ++ L L ++ G
Sbjct: 486 VLEVRHTMRQQNVRKTPGCSWIELKNGVHVFVSADRAHPEAYSIYAGLNSLTARLCEHGY 545
Query: 694 VPD 696
VPD
Sbjct: 546 VPD 548
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 179/386 (46%), Gaps = 52/386 (13%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F ++ C + ++K++H L G F+ + +++ Y +FG + A+ FE P
Sbjct: 62 FPCAIKACLDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPI-- 119
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+LWN+++ G +E L+ + +M V+ FT ++ MG +
Sbjct: 120 -RDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDL----N 174
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+I+H ++MG+ V + N LI MY K + D+ ++F+ +R K+ SWN + S
Sbjct: 175 NGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHE 234
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
D DG L L RM G++P+ VT T+
Sbjct: 235 QCGDHDGTLRLLDRMLGAGIQPDLVTVTT------------------------------- 263
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFE------DYVFVKNALICVYGKHGDVKVAQ 327
VL C+ LAA G+ IHG++I G D V +KNA+I +Y K G ++ A
Sbjct: 264 ----VLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAH 319
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+F + K++ SWN +I Y G +EA+E+FS++ ++ +P+ +++ V+ A
Sbjct: 320 LVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQ----LKPDEVTFVGVLSAC 375
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSV 413
+ G + + +M+ VA ++
Sbjct: 376 SHAGFVSQGRNFLAQMKSKYDVAPTI 401
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 112/225 (49%), Gaps = 8/225 (3%)
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH 435
NV +++A+I F +NG EE + ++KM+ V+ + T + C + + ++IH
Sbjct: 23 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI---KKIH 79
Query: 436 GHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
G + + + ++ + + L+N Y+K G +E + FE++ +D++ WN+M++GY G E
Sbjct: 80 GLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFE 139
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
L TF M + P +LS + G +N GR I ++ + + +
Sbjct: 140 MVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMK-MGYDSGVAVSNSL 198
Query: 556 VDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN---SCRMHKNT 597
+D+ G+ +++A +I + M E + + W ++ + C H T
Sbjct: 199 IDMYGKCKCIEDALEIFEMM-REKDIFSWNSIXSVHEQCGDHDGT 242
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 157/369 (42%), Gaps = 59/369 (15%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H + G ++ ++ ++ +Y + + DA +FE + WNSI V+
Sbjct: 179 IHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMR---EKDIFSWNSIXSVHEQ 235
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ- 168
G ++ L+L +M G+ D T V+ AC + + G+ +H +++ G
Sbjct: 236 CGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMH----GREIHGYMIVSGLGK 291
Query: 169 -----GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
+V + N +I MYAK G M D+ +F+++ K+ SWN+M G+ ++ + ALE
Sbjct: 292 DGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALE 351
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
+F RM L+P+ VT+ +LS+ + G + + + M+ +
Sbjct: 352 MFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSK----------------- 394
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE-EKNIVSWN 342
+ + E Y V + L G+ G + A L + E N V W
Sbjct: 395 -------------YDVAPTIEHYTCVIDML----GRAGQLDEAYELALTMPIEANPVVWR 437
Query: 343 ALITS---YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
AL+ + + A L + A + +LE GS + S V GA GR EE L++
Sbjct: 438 ALLAACRLHKHAVLAEVAAQRVFELEPEHCGS-----YVLMSNVYGAV---GRYEEVLEV 489
Query: 400 FRKMQLAKV 408
M+ V
Sbjct: 490 RHTMRQQNV 498
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 456 MYMKCGCLEEGHLVF-EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
MY KC + +F + + ++ +N++ISG+ NG E +++M G PD
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F + AC V E ++I ++ + F +E + + +V+ + GL++ A +
Sbjct: 61 TFPCAIKACLD---VLEIKKIHGLLFK-FGLELDVFIGSALVNCYLKFGLMEHAQVAFEE 116
Query: 575 MPMEPNAYVWGTLLN 589
+P+ + +W ++N
Sbjct: 117 LPIR-DVVLWNAMVN 130
>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 197/612 (32%), Positives = 325/612 (53%), Gaps = 19/612 (3%)
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
G + DA ++E P S + +++ V N L+++A ++ KM V + T
Sbjct: 194 GSVRDAVELYERCPLH---SVAFFTAMISGFVRNELHKDAFPVFRKMLTCSVRPNVVTLI 250
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
VI+AC +G+ F + G +V V F+ ++ + N LI +Y +MG + + ++FD
Sbjct: 251 CVIKAC--VGAGEFDLAMG-VVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDD 307
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
+ V++ +SW + +A D GA + M N V+W +L++ H + G E
Sbjct: 308 MEVRDVVSWTALLDVYADLGDLYGARRVLDAMPAR----NEVSWGTLIARHEQKGDTAEA 363
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
+ L+ M G + VLS CA L G IH +K G +FV ++LI +
Sbjct: 364 LKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDM 423
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
Y K AQ +F+ + EKN V WN+LI+ Y+ G EA +F++ M N
Sbjct: 424 YCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNK--------MPARN 475
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
+SW+ +I +A N R +AL+ F M + + +T+S +L CA +L +GR +H
Sbjct: 476 SVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHA 535
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
+V++ + NI + L +MY K G L+ VF Q+ +K+ ITW +M+ G NG E
Sbjct: 536 EIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEE 595
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
+++ FE+MIE G P+ F+A+L ACSH GLV + F+ M + I P+ +HY CMV
Sbjct: 596 SISLFEDMIENGIAPNEHTFLAILFACSHCGLVEQAIHYFETM-QAHGIPPKSKHYTCMV 654
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
D+L RAG L EA +++ + E + W +LL++C ++N ++ E A ++ L + T
Sbjct: 655 DVLARAGCLPEAEELLMKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTA 714
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKN 676
Y+LLSN+YA+ G+W+DAA+ RI + LKK AG SW++++ + H F S
Sbjct: 715 GYVLLSNMYASCGKWKDAAETRILMQGASLKKDAGCSWLQLRGQYHAFFSWKEKHPLSLE 774
Query: 677 VCEVLEELALQM 688
+ E+L+ L L++
Sbjct: 775 IYEILDLLMLEL 786
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 190/445 (42%), Gaps = 46/445 (10%)
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN 236
++ + K G ++ + +LF + K+ +S+ M A+EL++R L +
Sbjct: 155 MVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSV--- 211
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
+T+++S R ++ +F M + + V+ C + + G
Sbjct: 212 -AFFTAMISGFVRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVG 270
Query: 297 FVIKGG-FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
+K FE + V N+LI +Y + GD A +F ++E +++VSW AL+ YA+ G
Sbjct: 271 LAVKCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLG--- 327
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
+++ LD +M N +SW +I G EAL L+ +M N
Sbjct: 328 ---DLYGARRVLD--AMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCF 382
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
S +LS CA L G IH + +++ + N+ V + L++MY KC VF + +
Sbjct: 383 SSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPE 442
Query: 476 KDLITWNSMISGYGMN--------------------------GLGEN-----ALATFEEM 504
K+ + WNS+ISGY N G EN AL F M
Sbjct: 443 KNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAM 502
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+ +G P + +VL AC++ + GR + +V+ IE + + D+ ++G
Sbjct: 503 LASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVK-LGIEDNIFMGTALSDMYAKSGD 561
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLN 589
L + + MP E N W ++
Sbjct: 562 LDSSRRVFYQMP-EKNNITWTAMVQ 585
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 171/393 (43%), Gaps = 48/393 (12%)
Query: 31 LDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
+ CF +L C T+ L+ ++H + G++ + F+++ ++ +Y + + A+ VF
Sbjct: 379 ISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFN 438
Query: 88 TAPFD---CKSS-------------------------SLLWNSILRVNVSNGLYENALKL 119
+ P C +S S+ WN+++ N + +AL
Sbjct: 439 SLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNY 498
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
+ M G + T V+ AC + S G++VH ++++G + N+ + L
Sbjct: 499 FYAMLASGHIPGEITLSSVLLACANLCSLE----MGRMVHAEIVKLGIEDNIFMGTALSD 554
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MYAK G + S ++F ++ KN I+W M G A N + ++ LF+ M G+ PN T
Sbjct: 555 MYAKSGDLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENGIAPNEHT 614
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV-----CADLAADHMGKVI 294
+ ++L + + CG +E+ + F+ M+ GI ++ ++ V C A + + KV
Sbjct: 615 FLAILFACSHCGLVEQAIHYFETMQAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVS 674
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
+ + +A K + A+ L E+E+ N + L YA G
Sbjct: 675 SEL----DTSSWSSLLSACSTYRNKEIGERAAKKLH-ELEKDNTAGYVLLSNMYASCGKW 729
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+A E ++ G S+++ SW + G +
Sbjct: 730 KDAAETRILMQ---GASLKKDAGCSWLQLRGQY 759
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 139/314 (44%), Gaps = 42/314 (13%)
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
F + ++ + K GD+ A+ LF + EK++VS+ ++ + + G +AVE++ +
Sbjct: 150 FTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERC--- 206
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
+V ++A+I F N ++A +FRKM V N VT+ ++ C +
Sbjct: 207 -----PLHSVAFFTAMISGFVRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACVGAGE 261
Query: 428 LNIGREIHGHVVRVSM-NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
++ + G V+ ++ K+I V N L+ +Y++ G H VF+ +E +D+++W +++
Sbjct: 262 FDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLD 321
Query: 487 GYG-------------------------------MNGLGENALATFEEMIEAGFKPDGVA 515
Y G AL + +M+ G +P+
Sbjct: 322 VYADLGDLYGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISC 381
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
F +VLSAC+ + G RI ++ + + ++D+ + A + ++
Sbjct: 382 FSSVLSACATLQDLRGGTRIHANALK-MGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSL 440
Query: 576 PMEPNAYVWGTLLN 589
P E N W +L++
Sbjct: 441 P-EKNTVCWNSLIS 453
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 94/209 (44%), Gaps = 6/209 (2%)
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
S ++ A+A+ R + FR +A A+S T ++S ++ + R + +
Sbjct: 119 SNLLTAYAAFTRAADRDQAFRDC-VAADAASSFTYDFMVSEHVKAGDIASARRLFYGMPE 177
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
K+++ +++ MK G + + ++E+ + + +MISG+ N L ++A
Sbjct: 178 ----KSVVSYTTMVDALMKRGSVRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFPV 233
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F +M+ +P+ V + V+ AC AG + + + V+ E +E + ++ L
Sbjct: 234 FRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYL 293
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
R G A + +M + + W LL+
Sbjct: 294 RMGDAAAAHRVFDDMEVR-DVVSWTALLD 321
>gi|334183275|ref|NP_175765.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806499|sp|Q9C8L6.2|PPR80_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g53600, mitochondrial; Flags: Precursor
gi|332194847|gb|AEE32968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 717
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 215/677 (31%), Positives = 361/677 (53%), Gaps = 52/677 (7%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
LQ+ + I +Q+ N+ IV+ ++A ++S YA G++ A VF+ P +S
Sbjct: 66 LQEAEAI--FRQMSNRSIVS------WIA--MISAYAENGKMSKAWQVFDEMPVRVTTS- 114
Query: 98 LLWNSILRVNVSNGL-YENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
+N+++ + N A +L+ + + + +RA RF +
Sbjct: 115 --YNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAG--------RFDEAE 164
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
++ + F+ +V N L+ Y + G+ +++ ++F + VK +S + M G+
Sbjct: 165 FLYAET-PVKFRDSV-ASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMG 222
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG-IEVGAEAI 275
A LF RM E N +TWT+++ + + G E+ LF MR+ G ++V + +
Sbjct: 223 RIVDARSLFDRMT----ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTL 278
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
AV+ C D G IHG V + E +F+ N+L+ +Y K G + A+ +F ++
Sbjct: 279 AVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN 338
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG-----------------------GSM 372
K+ VSWN+LIT + EA E+F ++ D G M
Sbjct: 339 KDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMM 398
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
+ I+W+A+I AF SNG EEAL F KM +V NS T S +LS A A L G
Sbjct: 399 PEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGL 458
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
+IHG VV++++ ++ VQN L++MY KCG + + +F I + +++++N+MISGY NG
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNG 518
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
G+ AL F + +G +P+GV F+A+LSAC H G V+ G + F M + IEP +HY
Sbjct: 519 FGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHY 578
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
ACMVDLLGR+GLL +AS+++ MP +P++ VWG+LL++ + H D+AE A ++ L
Sbjct: 579 ACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEP 638
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
++ Y++LS +Y+ G+ D ++ K+K +KK G SWI +K ++H F +G+ Q
Sbjct: 639 DSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQL 698
Query: 673 DLKNVCEVLEELALQME 689
+L+ + L+ + +ME
Sbjct: 699 NLEEIGFTLKMIRKEME 715
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 166/415 (40%), Gaps = 88/415 (21%)
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
S +S HAR G L+E +F M R I ++ + + A M K F
Sbjct: 55 SQISKHARNGNLQEAEAIFRQMSNRSI------VSWIAMISAYAENGKMSKAWQVF---- 104
Query: 302 GFEDYVFVK-----NALICVYGKHG-DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
D + V+ NA+I K+ D+ A LF +I EKN VS+ +IT + AG D
Sbjct: 105 ---DEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFD 161
Query: 356 EAVEVFSQLE---------------KLDGGS----------MERPNVISWSAVIGAFASN 390
EA ++++ L G M V+S S+++ +
Sbjct: 162 EAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKM 221
Query: 391 GRGEEALDLFRKM--------------------------------QLAKVVANSVTISGL 418
GR +A LF +M Q V NS T++ +
Sbjct: 222 GRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
C + G +IHG V R+ + ++ + N L++MY K G + E VF ++ KD
Sbjct: 282 FKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDS 341
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
++WNS+I+G A FE+M D V++ ++ S G +++ +F M
Sbjct: 342 VSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKCVELFGM 397
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTLLNS 590
M + I + M+ G +EA M + PN+Y + ++L++
Sbjct: 398 MPEKDNIT-----WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 82.8 bits (203), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 150/330 (45%), Gaps = 37/330 (11%)
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE- 365
+F N+ I + ++G+++ A+ +F ++ ++IVSW A+I++YAE G +A +VF ++
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 366 ----------------KLDGG-------SMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
K D G + N +S++ +I F GR +EA L+ +
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 403 --MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
++ VA++V +SG L + A+ R G V K ++ + +++ Y K
Sbjct: 170 TPVKFRDSVASNVLLSGYLRAGKWNEAV---RVFQGMAV-----KEVVSCSSMVHGYCKM 221
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG-FKPDGVAFVAV 519
G + + +F+++ ++++ITW +MI GY G E+ F M + G K + +
Sbjct: 222 GRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
AC EG +I ++ R +E + ++ + + G + EA + M
Sbjct: 282 FKACRDFVRYREGSQIHGLVSR-MPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK-NK 339
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
++ W +L+ K A + ++ G
Sbjct: 340 DSVSWNSLITGLVQRKQISEAYELFEKMPG 369
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 216/723 (29%), Positives = 345/723 (47%), Gaps = 105/723 (14%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + + +VH I G + F+A ++ +Y + L AR +F+ P
Sbjct: 183 FPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMP 242
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
K + WNS++ SNG AL+L+ +M+K + + +TF ++AC+ SF
Sbjct: 243 E--KEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACE-DSSF-- 297
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G +H VL+ + NV + N LI MYA+ G+M ++ +F + + ISWN M S
Sbjct: 298 -IKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLS 356
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
GF N AL+ + M G +P+ V S++++ AR G M
Sbjct: 357 GFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQ------------ 404
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
IH + +K G + + V N+L+ +Y K +K +F
Sbjct: 405 -----------------------IHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIF 441
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFS--QLEKLDGGSMERPNV----------- 377
++ +K++VSW +I +A+ G A+E+F QLE +D M ++
Sbjct: 442 DKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLIS 501
Query: 378 -----------------ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
+ + ++ + G + A +F ++ VV+ + IS +
Sbjct: 502 SVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVH 561
Query: 421 VCAESAALNI-------------------------------GREIHGHVVRVSMNKNILV 449
+ AL + G+EIHG ++R +
Sbjct: 562 NGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSL 621
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
+ L++MY +CG LE+ VF I KDL+ W SMI+ YGM+G G A+ F M +
Sbjct: 622 ASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESI 681
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
PD +AFVAVL ACSH+GL+NEGRR + M E+++EP EHYAC+VDLLGRA L+EA
Sbjct: 682 APDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAY 741
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASG 629
VK M +EP A VW LL +C++H N ++ E A ++ + E G+Y+L+SN+Y+A
Sbjct: 742 QFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAER 801
Query: 630 RWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
RW+D VR+ K GLKK G SWIEV K+H F + + + L ++ ++
Sbjct: 802 RWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLA 861
Query: 690 NKG 692
+G
Sbjct: 862 KEG 864
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 167/638 (26%), Positives = 303/638 (47%), Gaps = 122/638 (19%)
Query: 29 SLLDCFDHLLQQC---KTIHQLKQVHNQLIVTGA-NASAFLAARVLSIYARFGRLFDARN 84
SL + + +L+ C K + + +QVH +I + A S FL+ R++ +Y + G L DA
Sbjct: 76 SLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEK 135
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
+F+ P + WN+++ V+NG +L+LY +MR G+ D TFP +++AC
Sbjct: 136 LFDGMP---HKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGL 192
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYI 203
+ R +G VH ++ G+ V + N ++GMY K ++ + +LFD++ K + +
Sbjct: 193 LKDRR----YGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVV 248
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
SWN M S ++ N AL LF M+ L PN T+ +
Sbjct: 249 SWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVA--------------------- 287
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
L C D + G IH V+K + VFV NALI +Y + G +
Sbjct: 288 --------------ALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKM 333
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
A N+F +++ + +SWN++++ + + GL EA++ + ++ D G ++P++++ ++
Sbjct: 334 GEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMR--DAG--QKPDLVAVISI 389
Query: 384 IGAFASNGR----------------------GEEALDL-------------FRKMQLAKV 408
I A A +G G +D+ F KM V
Sbjct: 390 IAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDV 449
Query: 409 VANSVTISGLLSVCAESAALNIGR-------------------------------EIHGH 437
V+ + I+G + S AL + R EIH +
Sbjct: 450 VSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSY 509
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
++R ++ ++++QNG++++Y +CG ++ +FE IE KD+++W SMIS Y NGL A
Sbjct: 510 IIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEA 568
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHYACMV 556
L F M E G +PD ++ V++LSA + + +G+ I ++R+ F +E + + +V
Sbjct: 569 LELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA--STLV 626
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
D+ R G L+++ ++ N + +W +++N+ MH
Sbjct: 627 DMYARCGTLEKSRNVF-NFIRNKDLVLWTSMINAYGMH 663
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 217/715 (30%), Positives = 349/715 (48%), Gaps = 71/715 (9%)
Query: 34 FDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + L Q +H ++ +G + LA +L IY G + A +FE
Sbjct: 131 FLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME 190
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
D S WN+ + N +G + AL+L+ +M+ GV T + + C
Sbjct: 191 RDLVS----WNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCA------- 239
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+ + +H+ V + G + + + L YA++G + + ++FD+ ++ +SWN M
Sbjct: 240 KIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLG 299
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWT----------------------------- 241
+A + A LF RM EG+ P+ VT
Sbjct: 300 AYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLRFGRMIHACALEKGLDRDIV 359
Query: 242 ---SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
+LL + RCG EE LF+ GI A++ + M + + F
Sbjct: 360 LGNALLDMYTRCGSPEEARHLFE-----GIP--GNAVSWNTMIAGSSQKGQMKRALELFQ 412
Query: 299 ---IKGGFEDYVFVKNALICVYGKHGDVKV---AQNLFSEIEEKNIVSWNALITS----Y 348
++G N L V + + + L S I S A+ T+ Y
Sbjct: 413 RMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMY 472
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSME-RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
A G DEA F + G+ME R +V+SW+A+I + + +G G+ AL FR+M L
Sbjct: 473 ASCGAIDEAAASFQR------GAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHG 526
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
V N +T +L CA +AAL G +H H+ M N+ V L +MY +CG LE
Sbjct: 527 VAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAR 586
Query: 468 LVFEQIE-KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
+FE++ ++D++ +N+MI+ Y NGL AL F M + G +PD +FV+VLSACSH
Sbjct: 587 EIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHG 646
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GL +EG IF M + + I P +HYAC VD+LGRAG L +A ++++ M ++P VW T
Sbjct: 647 GLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKT 706
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL +CR +++ D S + L +Y++LSNI A +G+W++AA+VR +++GL
Sbjct: 707 LLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGL 766
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+K AG+SWIE+K ++H F +G+ + + LE L ++ G VPD ++L
Sbjct: 767 RKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVL 821
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 197/462 (42%), Gaps = 96/462 (20%)
Query: 132 GFTFPL-VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
G T P ++R + G R S G+ +H ++ +G + + N L+ +Y K + D
Sbjct: 25 GATRPAHLVRLLRAAGDDRL-LSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDV 81
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
++F ++ V++ SW + + + + A+ +F RM+ EG+ + VT+ ++L + AR
Sbjct: 82 EEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARL 141
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
G L + G+ IH ++++ G E +
Sbjct: 142 GDLSQ-----------------------------------GRSIHAWIVESGLEGKSVLA 166
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
N L+ +YG G V A LF + E+++VSWNA I + A++G D A+E
Sbjct: 167 NLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALE----------- 214
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
LF++MQL V +T+ LSVCA+ +
Sbjct: 215 ----------------------------LFQRMQLEGVRPARITLVITLSVCAK---IRQ 243
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
R IH V + + ++V L + Y + G L++ VF++ ++D+++WN+M+ Y
Sbjct: 244 ARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQ 303
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
+G A F M+ G P V V + CS F M+ +E ++
Sbjct: 304 HGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLR--------FGRMIHACALEKGLD 355
Query: 551 HYA----CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
++D+ R G +EA + + +P NA W T++
Sbjct: 356 RDIVLGNALLDMYTRCGSPEEARHLFEGIP--GNAVSWNTMI 395
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 123/253 (48%), Gaps = 14/253 (5%)
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
N L+ Y + + EVFS+LE D S W+ +I A+ +G+ + A+ +F
Sbjct: 66 NHLLRLYLKCESLGDVEEVFSRLEVRDEAS--------WTTIITAYTEHGQAKRAIWMFH 117
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+MQ V ++VT +L CA L+ GR IH +V + ++ N LL++Y CG
Sbjct: 118 RMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCG 177
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
C+ L+FE++E +DL++WN+ I+ +G + AL F+ M G +P + V LS
Sbjct: 178 CVASAMLLFERME-RDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLS 236
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
C+ + + R I +VRE +E + + R G L +A ++ + E +
Sbjct: 237 VCAK---IRQARAIHS-IVRESGLEQTLVVSTALASAYARLGHLDQAKEVF-DRAAERDV 291
Query: 582 YVWGTLLNSCRMH 594
W +L + H
Sbjct: 292 VSWNAMLGAYAQH 304
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 175/367 (47%), Gaps = 21/367 (5%)
Query: 6 LHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFL 65
L Q Q P R TY N LL+ ++ + + + +++H++++ G + +
Sbjct: 410 LFQRMQLEGMAPVRA----TYLN-LLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAI 464
Query: 66 AARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
V+ +YA G + +A F+ + + + WN+I+ +G + AL + +M
Sbjct: 465 GTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDL 524
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
GV + T V+ AC + + G IVH+H+ G + NV + L MY + G
Sbjct: 525 HGVAPNQITCVAVLDACAGAAA----LTEGVIVHDHLRHSGMESNVFVATALASMYGRCG 580
Query: 186 QMSDSFKLFDKVRV-KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
+ + ++F+KV V ++ + +N M + ++ N AL+LF RM+ EG P+ ++ S+L
Sbjct: 581 SLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVL 640
Query: 245 SSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVC--ADLAADHMGKVIHGFVIKG 301
S+ + G +E ++F MR+ GI + A + V A AD ++I +K
Sbjct: 641 SACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLAD-AEELIRCMDVK- 698
Query: 302 GFEDYVFVKNALICVYGKHGDV---KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
V V L+ K+ DV ++A ++ E++ + ++ L A AG DEA
Sbjct: 699 ---PTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAA 755
Query: 359 EVFSQLE 365
EV +++E
Sbjct: 756 EVRTEME 762
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 193/626 (30%), Positives = 331/626 (52%), Gaps = 95/626 (15%)
Query: 127 GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK--- 183
G D FP V+++C M RF G+ VH ++++G +++ N L+ MY+K
Sbjct: 5 GKYPDHNVFPSVLKSCTLMKDLRF----GESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60
Query: 184 -----------------------MGQMSDSFKL----------FDKVRVKNYISWNMMF- 209
+G+ S+S L D+ N +S N+++
Sbjct: 61 LEEGGVQRFCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMS-NILYQ 119
Query: 210 -SGFALNFDCDGALELFKRMELEGL-------------EPNFVTWTSLLSSHARCGRLEE 255
+ + FD +++ + E E + + V+W +++S +A+ G E+
Sbjct: 120 VNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHED 179
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
+ + M + + ++ VL + A+ GK IHG+ I+ G++ VF+ ++LI
Sbjct: 180 ALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLID 239
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
+Y K V D++ VF L + DG
Sbjct: 240 MYAKCTRV-------------------------------DDSCRVFYMLPQHDG------ 262
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH 435
ISW+++I NG +E L F++M +AK+ N V+ S ++ CA L++G+++H
Sbjct: 263 --ISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLH 320
Query: 436 GHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
G+++R + N+ + + L++MY KCG + +F+++E D+++W +MI GY ++G
Sbjct: 321 GYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAY 380
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
+A++ F+ M G KP+ VAF+AVL+ACSHAGLV+E + F+ M +++RI P +EHYA +
Sbjct: 381 DAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAV 440
Query: 556 VDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETT 615
DLLGR G L+EA + + +M +EP VW TLL +CR+HKN ++AE ++ ++F + +
Sbjct: 441 ADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNI 500
Query: 616 GSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLK 675
G+Y+LLSNIY+A+GRW+DA K+RI+ + KG+KK SWIE+K K+H F +G+
Sbjct: 501 GAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYD 560
Query: 676 NVCEVLEELALQMENKGCVPDNDIIL 701
+ E L+ L QME +G V D +L
Sbjct: 561 RINEALKVLLEQMEREGYVLDTTEVL 586
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 179/363 (49%), Gaps = 52/363 (14%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGR----LFDARNVFETAPFDCKSSSLLWN 101
L Q+ N L F + +Y++ + L R VFE P K + WN
Sbjct: 109 DLNQMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMP---KRDIVSWN 165
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA-CKFMGSFRFRFSFGQIVHN 160
+++ N NG++E+AL + +M + D FT V+ +++ + G+ +H
Sbjct: 166 TVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLK-----GKEIHG 220
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
+ ++ G+ +V I + LI MYAK ++ DS ++F + + ISWN + +G N D
Sbjct: 221 YAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDE 280
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
L+ F++M + ++PN V+++S++ +
Sbjct: 281 GLKFFQQMLIAKIKPNHVSFSSIMPA---------------------------------- 306
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
CA L H+GK +HG++I+ F+ VF+ +AL+ +Y K G+++ A+ +F ++E ++VS
Sbjct: 307 -CAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVS 365
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
W A+I YA G +A+ +F ++E ++G +PN +++ AV+ A + G +EA F
Sbjct: 366 WTAMIMGYALHGHAYDAISLFKRME-VEG---VKPNYVAFMAVLTACSHAGLVDEAWKYF 421
Query: 401 RKM 403
M
Sbjct: 422 NSM 424
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 184/364 (50%), Gaps = 32/364 (8%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K++H I G +A F+ + ++ +YA+ R+ D+ VF P + + WNSI+
Sbjct: 216 KEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLP---QHDGISWNSIIAGC 272
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
V NG+++ LK + +M + + +F ++ AC + + G+ +H ++++ F
Sbjct: 273 VQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHL----GKQLHGYIIRSRF 328
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
GNV I + L+ MYAK G + + +FDK+ + + +SW M G+AL+ A+ LFKR
Sbjct: 329 DGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKR 388
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLA 286
ME+EG++PN+V + ++L++ + G ++E F+ M + I G E A V
Sbjct: 389 MEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAV-------- 440
Query: 287 ADHMGKV-----IHGFVIKGGFEDYVFVKNALICVYGKHGDV----KVAQNLFSEIEEKN 337
AD +G+V + F+ E V + L+ H ++ KV++ LF+ ++ +N
Sbjct: 441 ADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFT-VDPQN 499
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV---IGAFASNGRGE 394
I ++ L Y+ AG +A ++ ++ D G ++P SW + + AF + +
Sbjct: 500 IGAYVLLSNIYSAAGRWKDARKL--RIAMRDKGMKKKP-ACSWIEIKNKVHAFVAGDKSH 556
Query: 395 EALD 398
D
Sbjct: 557 PYYD 560
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 123/246 (50%), Gaps = 23/246 (9%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++ C T+H KQ+H +I + + + F+A+ ++ +YA+ G + AR +F+
Sbjct: 300 FSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKME 359
Query: 91 -FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG--- 146
+D S W +++ +G +A+ L+ +M GV + F V+ AC G
Sbjct: 360 LYDMVS----WTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVD 415
Query: 147 -SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS- 204
++++ F + ++ + G + + V +L+G ++G++ ++++ + ++ S
Sbjct: 416 EAWKY---FNSMTQDYRIIPGLE-HYAAVADLLG---RVGRLEEAYEFISDMHIEPTGSV 468
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMM 263
W+ + + ++ + + A ++ K+ L ++P + LLS+ ++ GR ++ L M
Sbjct: 469 WSTLLAACRVHKNIELAEKVSKK--LFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAM 526
Query: 264 RKRGIE 269
R +G++
Sbjct: 527 RDKGMK 532
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 197/629 (31%), Positives = 340/629 (54%), Gaps = 83/629 (13%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L+ ++ +Y + GRL A +VF+ K + + W +++ ++ NG +L L+ KM
Sbjct: 9 LSNDLIVMYGKCGRLGVACDVFDRM---LKRNVVSWTALMCGHIQNGNPLESLLLFSKMG 65
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
GV + FTF ++AC + G+ +H+ ++ GF + N +I MY+K
Sbjct: 66 LSGVKPNDFTFSTNLKACGLLNGL----DIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G+++++ +F+ + V+N ISWN M +G+ + C+ AL LF++M+ G + T+TS L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
+ C+DL A G IH F+I GGF
Sbjct: 182 KA-----------------------------------CSDLGAIKEGNQIHAFLITGGFL 206
Query: 305 DYV--FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
V V ALI +Y K G + +A+ +FS IEEK+++SW ALI YA+ G E++E+F
Sbjct: 207 YSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFR 266
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
QL + + + + +S ++ V
Sbjct: 267 QLRE---------------------------------------SSIQVDGFILSSMMGVF 287
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A+ A + G+++H ++V +I V N +L+MY+KCG + E +F ++ +++I+W
Sbjct: 288 ADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWT 347
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
MI+GYG +GLG+ A+ F+EM +PD V ++AVL CSH+GLV +G+ F +
Sbjct: 348 VMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSY 407
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
I+ ++EHYACMVDLLGRAG L+EA ++V +MP+E N +W TLL++CR+H + ++ +
Sbjct: 408 HGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKE 467
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
+ + L +E +Y+++SNIYA +G W++ ++R K+K LKK AG+SW+E+ +++H
Sbjct: 468 VGGILLRLDSENPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVH 527
Query: 663 MFSSGNSLQSDLKNVCEVLEELALQMENK 691
F G+ + + E+L+E+ +M+ +
Sbjct: 528 FFYGGDDTHPLTEKIHEILKEMERRMKEE 556
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 221/483 (45%), Gaps = 85/483 (17%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L+ C ++ L +Q+H+ + TG + + ++ +Y++ GR+ +A +FE P
Sbjct: 76 FSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMP 135
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + WN+++ G E AL L+ KM+++G D FTF ++AC +G+ +
Sbjct: 136 V---RNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIK- 191
Query: 151 RFSFGQIVHNHVLQMGF--QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
G +H ++ GF N + LI +Y K G++ + ++F + K+ ISW +
Sbjct: 192 ---EGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTAL 248
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
G+A G L E+M+LF +R+ I
Sbjct: 249 ILGYAQE-----------------------------------GNLAESMELFRQLRESSI 273
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
+V ++ ++ V AD A GK +H F IK + V N+++ +Y K G + A+
Sbjct: 274 QVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAER 333
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
LFSE+ +N++SW +IT Y + GL EA+ +F +++ LD P+ +++ AV+ +
Sbjct: 334 LFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQ-LDS---TEPDDVTYLAVLLGCS 389
Query: 389 SNGRGEEALDLFR--------------------------KMQLAKVVANSVTISG----- 417
+G E+ + F +++ AK + +S+ +
Sbjct: 390 HSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIW 449
Query: 418 --LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
LLS C L +G+E+ G ++R+ ++N + + N+Y G +E + E ++
Sbjct: 450 QTLLSACRVHGDLELGKEVGGILLRLD-SENPVNYVMMSNIYADAGYWKECERIRELVKS 508
Query: 476 KDL 478
K L
Sbjct: 509 KKL 511
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
++++ N L+ MY KCG L VF+++ K+++++W +++ G+ NG +L F +M
Sbjct: 6 DLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMG 65
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHYACMVDLLGRAGL 564
+G KP+ F L AC ++ GR+I D+ V+ F + + + ++D+ + G
Sbjct: 66 LSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGN--SIIDMYSKCGR 123
Query: 565 LQEASDIVKNMPMEPNAYVWGTLL 588
+ EA+ + + MP+ N W ++
Sbjct: 124 INEAACMFEVMPVR-NLISWNAMI 146
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 176/478 (36%), Positives = 277/478 (57%), Gaps = 32/478 (6%)
Query: 259 LFDMMRKRGIEVGAE--AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
LF MR +G + + L CA +G+ IH + G + VFV ++ I +
Sbjct: 107 LFASMRPQGHACFPDHYTYPLALKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISM 166
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL-----EKLDGGS 371
Y + G A +F E++ +++VSWNA+I+ +A AGL A++VF +L K D G+
Sbjct: 167 YARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGT 226
Query: 372 MER--PN-----------------------VISWSAVIGAFASNGRGEEALDLFRKMQLA 406
M P+ +ISW+A++ + +N EA++LF +MQ
Sbjct: 227 MASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKD 286
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
+ ++VT++ +L C E +AL++G+ IH + R M ++L++N L++MY CGCL+E
Sbjct: 287 GIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEA 346
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
VF+ + +D+++W S+IS YG +G G A+ FE+M G +PD +AFVA+L+ACSHA
Sbjct: 347 RDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHA 406
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GL++ G+ F M EF I P++EHYACMVDLLGRAG ++EA D + MP++PN VWG
Sbjct: 407 GLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGA 466
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL +CR+H N D+ A + L + TG Y+LLSNIYA +GRW D + VR ++KG+
Sbjct: 467 LLGACRIHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGI 526
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
KK+ G S E+ ++H F G++ K + + L EL ++ G P+ + L ++
Sbjct: 527 KKLPGVSNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATLHDV 584
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 201/399 (50%), Gaps = 56/399 (14%)
Query: 37 LLQQCKT---IHQLKQVHNQLI----VTGANASAFLAARVLSIYARFGRLFDARNVFETA 89
L+ C+ + L+ H +L+ + ASA + +++ YA L AR V + +
Sbjct: 21 LVDSCRAPAHLRSLRAAHARLLFLLRLPSHPASAAVRVKLIQAYAACAALPAARAVLDAS 80
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG--VLGDGFTFPLVIRACKFMGS 147
P +++ +N +LR + L+ +AL L+ MR G D +T+PL +++C
Sbjct: 81 P---DRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDG 137
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
G+ +H+ ++G GNV + + I MYA+ G+ D++++F++++ ++ +SWN
Sbjct: 138 L----VLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNA 193
Query: 208 MFSGFALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLE------------ 254
M SGFA A+++F+ + L+ +P+ T S+L S + R+E
Sbjct: 194 MISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGK-ARVEDIALLKGVFDEM 252
Query: 255 ----------------------ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
E ++LF M+K GIE A +A VL C +++A +GK
Sbjct: 253 RFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGK 312
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
IH + + + ++NAL+ +Y G +K A+++F + +++VSW ++I++Y G
Sbjct: 313 RIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHG 372
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
EA+++F EK+ G +E P+ I++ A++ A + G
Sbjct: 373 HGREAIDLF---EKMCGQGLE-PDSIAFVAILAACSHAG 407
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 88/155 (56%), Gaps = 4/155 (2%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN++L V +N ++ A++L+++M+K G+ D T V+ +C + + S G+ +H
Sbjct: 260 WNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSAL----SLGKRIH 315
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+ + ++ + N L+ MYA G + ++ +FD + ++ +SW + S + +
Sbjct: 316 EVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGR 375
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
A++LF++M +GLEP+ + + ++L++ + G L+
Sbjct: 376 EAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLD 410
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 217/723 (30%), Positives = 348/723 (48%), Gaps = 105/723 (14%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + + +VH I G + F+A ++ +Y + L AR +F+ P
Sbjct: 219 FPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMP 278
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
K + WNS++ SNG AL+L+ +M+K + + +TF ++AC+ SF
Sbjct: 279 E--KEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACE-DSSF-- 333
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G +H VL+ + NV + N LI MYA+ G+M ++ +F + + ISWN M S
Sbjct: 334 -IKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLS 392
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
GF N AL+ + M G +P+ V S++++ AR G T++
Sbjct: 393 GFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGN---TLN------------ 437
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
G IH + +K G + + V N+L+ +Y K +K +F
Sbjct: 438 --------------------GMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIF 477
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFS--QLEKLDGGSM---------------- 372
++ +K++VSW +I +A+ G A+E+F QLE +D M
Sbjct: 478 DKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLIS 537
Query: 373 ------------ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
+++ + ++ + G + A +F ++ VV+ + IS +
Sbjct: 538 SVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVH 597
Query: 421 VCAESAALNI-------------------------------GREIHGHVVRVSMNKNILV 449
+ AL + G+EIHG ++R +
Sbjct: 598 NGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSL 657
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
+ L++MY +CG LE+ VF I KDL+ W SMI+ YGM+G G A+ F M +
Sbjct: 658 ASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESI 717
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
PD +AFVAVL ACSH+GL+NEGRR + M E+++EP EHY C+VDLLGRA L+EA
Sbjct: 718 APDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAY 777
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASG 629
VK M +EP A VW LL +C++H N ++ E A ++ + E G+Y+L+SN+YAA
Sbjct: 778 QFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAER 837
Query: 630 RWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
RW+D +VR+ K GLKK G SWIEV K+H F + + + L ++ ++
Sbjct: 838 RWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLA 897
Query: 690 NKG 692
+G
Sbjct: 898 KEG 900
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 167/638 (26%), Positives = 302/638 (47%), Gaps = 122/638 (19%)
Query: 29 SLLDCFDHLLQQC---KTIHQLKQVHNQLIVTGA-NASAFLAARVLSIYARFGRLFDARN 84
SL + + +L+ C K + + +QVH +I + A S FL+ R++ +Y + G L DA
Sbjct: 112 SLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEK 171
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
+F+ P + WN+++ V+NG +L+LY +MR G+ D TFP +++AC
Sbjct: 172 LFDGMP---HKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGL 228
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYI 203
+ R G VH ++ G+ V + N ++GMY K ++ + +LFD++ K + +
Sbjct: 229 LKDRR----CGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVV 284
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
SWN M S ++ N AL LF M+ L PN T+ +
Sbjct: 285 SWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVA--------------------- 323
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
L C D + G IH V+K + VFV NALI +Y + G +
Sbjct: 324 --------------ALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKM 369
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
A N+F +++ + +SWN++++ + + GL EA++ + ++ D G ++P++++ ++
Sbjct: 370 GEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMR--DAG--QKPDLVAVISI 425
Query: 384 IGAFASNGR----------------------GEEALDL-------------FRKMQLAKV 408
I A A +G G +D+ F KM V
Sbjct: 426 IAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDV 485
Query: 409 VANSVTISGLLSVCAESAALNIGR-------------------------------EIHGH 437
V+ + I+G + S AL + R EIH +
Sbjct: 486 VSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSY 545
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
++R ++ ++++QNG++++Y +CG ++ +FE IE KD+++W SMIS Y NGL A
Sbjct: 546 IIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEA 604
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHYACMV 556
L F M E G +PD ++ V++LSA + + +G+ I ++R+ F +E + + +V
Sbjct: 605 LELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA--STLV 662
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
D+ R G L+++ ++ N + +W +++N+ MH
Sbjct: 663 DMYARCGTLEKSRNVF-NFIRNKDLVLWTSMINAYGMH 699
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 194/670 (28%), Positives = 337/670 (50%), Gaps = 91/670 (13%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
L+Q C T + I G + LA ++ Y G + +AR +F+ P +
Sbjct: 24 QLVQNCTT-----PPNPPFIPKGPSV---LATTLIKSYFGKGLIGEARTLFDEMP---ER 72
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ W ++ S + +A ++ +M + + FT V++ACK M S+G
Sbjct: 73 DVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCL----SYG 128
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMG-QMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
++VH ++ G G +++ N L+ MYA M D+ +F + +KN +S
Sbjct: 129 RLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVS---------- 178
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
WT+L++ + + +F M +E+ +
Sbjct: 179 -------------------------WTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFS 213
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
++ + C + + G+ +H V K GFE + V N+++ +Y + A F E+
Sbjct: 214 FSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMN 273
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
++++++WN LI Y ER N
Sbjct: 274 QRDLITWNTLIAGY------------------------ERSNPT---------------- 293
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
E+L +F M+ N T + +++ CA A LN G++IHG ++R ++ N+ + N L+
Sbjct: 294 ESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALI 353
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCG + + H VF + ++DL++W +M+ GYG +G GE A+ F++M+ +G +PD V
Sbjct: 354 DMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRV 413
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F+A+LSACSHAGLV+EG R F +MV ++ I P E Y C+VDLLGRAG ++EA +++++
Sbjct: 414 VFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIES 473
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP +P+ VWG L +C+ H ++ + A +I L G+Y++LSNIYAA G+W +
Sbjct: 474 MPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGEF 533
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
A++R K G KK G+SW+EV ++ F G+ + S ++ + +VLE L M+ G V
Sbjct: 534 ARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSKIEGIYQVLENLIGHMKESGYV 593
Query: 695 PDNDIILWEM 704
PD D +++++
Sbjct: 594 PDLDCLIYDL 603
>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 190/618 (30%), Positives = 319/618 (51%), Gaps = 57/618 (9%)
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
ARN+F+ P + + L ++ L + + L+ + M + G PLV ++
Sbjct: 72 ARNLFDAVP---RPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKS 128
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C S G+ VH H L G G+V ++ L+ YAK G M + +FD++ VK+
Sbjct: 129 CALTASS----CQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVKD 184
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
I N + +G++ D D A LF ME +W S+++ +A G E + LFD
Sbjct: 185 PIPINCLITGYSKAGDVDKARRLFDGMERR----TSASWNSMIACYAHGGEFREALTLFD 240
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
M G A I V S+CA K G
Sbjct: 241 RMLSEGARPNAITITSVFSICA-----------------------------------KSG 265
Query: 322 DV---KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
D+ K ++L E + +N++ AL+ Y + D+A F ++ + D V+
Sbjct: 266 DLDTGKRVRDLIGEDDLQNVIVHTALMEMYVKCRAIDDARREFDRMSQRD--------VV 317
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHV 438
+WS +I +A NGR E+L+LF +M+ N VT+ G++S CA+ + + +I +
Sbjct: 318 AWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDELVEQIGNYA 377
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
+ + + L++MY +CG + VF ++E+K +ITWNSMI G MNG E+A+
Sbjct: 378 ENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAI 437
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
+ +E+M E G +P+ + FVA+L+AC+HAGLV++G F+ M RE + PQ+EH AC+VDL
Sbjct: 438 SLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDL 497
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
L ++G L EA + +M +EPNA +W TLL+SCR H + ++A+ + ++ + + + Y
Sbjct: 498 LCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVELAKLASRKLLAMEPDNSSIY 557
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
+LLSNIYA +G W DA ++R ++K ++K++ SWI++ ++H F ++ +
Sbjct: 558 VLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQDTYHPRSAEIY 617
Query: 679 EVLEELALQMENKGCVPD 696
+V+ L L ++ PD
Sbjct: 618 DVIHGLGLLLDRADSDPD 635
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 170/396 (42%), Gaps = 72/396 (18%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRL------FDARNVFETAPFDC------ 93
Q +QVH +V G F+ ++ YA+ G + FD V + P +C
Sbjct: 137 QGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVKDPIPINCLITGYS 196
Query: 94 ----------------KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPL 137
+ +S WNS++ G + AL L+ +M G + T
Sbjct: 197 KAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARPNAITITS 256
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
V C G G+ V + + + Q NV + L+ MY K + D+ + FD++
Sbjct: 257 VFSICAKSGD----LDTGKRVRDLIGEDDLQ-NVIVHTALMEMYVKCRAIDDARREFDRM 311
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
++ ++W+ M +G+A N +LELF+RM+ PN VT
Sbjct: 312 SQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVT------------------ 353
Query: 258 DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
+ V+S CA L +D + + I + ++ +ALI +Y
Sbjct: 354 -----------------LVGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMY 396
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
+ G V A+++FS +E+K +++WN++I A G ++A+ ++ EK+ ++ PN
Sbjct: 397 TRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLY---EKMAENGVQ-PNE 452
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
I++ A++ A G ++ + F +M+ +V+ V
Sbjct: 453 ITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQV 488
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 133/297 (44%), Gaps = 16/297 (5%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++ +Y + + DAR F+ + + W++++ NG +L+L+ +M+
Sbjct: 291 LMEMYVKCRAIDDARREFDRM---SQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDC 347
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ T VI AC +GS G N L + ++ + LI MY + G +
Sbjct: 348 RPNEVTLVGVISACAQLGSDELVEQIGNYAENQRLPL----TSYLGSALIDMYTRCGHVG 403
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ +F ++ K I+WN M G A+N + A+ L+++M G++PN +T+ +LL++
Sbjct: 404 RARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACT 463
Query: 249 RCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGK-VIHGFVIKGGFEDY 306
G +++ M F +M R+ + E A ++ DL G + F+ E
Sbjct: 464 HAGLVDQGMAFFEEMKREHLVSPQVEHCACIV----DLLCKSGGLWEAYKFICDMEVEPN 519
Query: 307 VFVKNALICVYGKHGDV---KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
+ L+ H DV K+A +E N + L YA+AGL +A E+
Sbjct: 520 AVIWTTLLSSCRAHADVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGDAREI 576
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 204/668 (30%), Positives = 337/668 (50%), Gaps = 89/668 (13%)
Query: 35 DHLLQQ---CKTIHQLKQVHNQLIVTGANASA---FLAARVLSIYARFGRLFDARNVFET 88
D LL+ +++++ K +H I +G S L + + YA G + AR +F+
Sbjct: 83 DSLLRHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFD- 141
Query: 89 APFDCKSSSL-LWNSILRVNVSNGLYENALKLYVKMRKLGVL-GDGFTFPLVIRACKFMG 146
D SL LWN+I+++ V G + +AL+++ M G D +TFPLVI+AC M
Sbjct: 142 ---DLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMS 198
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
+ G ++H L GF N+ + N L+ MY G++ + ++F+ + ++ +SWN
Sbjct: 199 ----MLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWN 254
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
+++S + GR EE + +F+ M
Sbjct: 255 -----------------------------------TMISGWFQNGRPEEALAVFNSMMDA 279
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
+E + I L C L +G +H V K ++ + V+NAL+ +Y + G + A
Sbjct: 280 RVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEA 339
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG----------------- 369
+F+E +EK++++W ++I Y G A+ + ++ LDG
Sbjct: 340 SLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQ-LDGVVPNAVTLASLLSACAS 398
Query: 370 ------------------GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVAN 411
+ + W+A++ N EA+ LF+ M + +V AN
Sbjct: 399 LCYMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEAN 458
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
T + ++ A A L +H ++VR I V GL++MY KCG L+ H +F+
Sbjct: 459 HATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFD 518
Query: 472 QI--EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
+I ++KD+I W+ +I+GYGM+G GE A+ F +M+ +G +P+ + F +VL ACSH GLV
Sbjct: 519 EIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLV 578
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
++G +F M+ + P HY C+VDLLGRAG L EA D++K+MP + N +WG LL
Sbjct: 579 DDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLG 638
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
+C +H+N ++ E A ++F L E+TG+Y+LL+NIYAA GRW+DA VR GL+K
Sbjct: 639 ACLIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRWKDAENVRHIMSKIGLRKT 698
Query: 650 AGQSWIEV 657
QS + V
Sbjct: 699 PAQSSVGV 706
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN---ILVQNGLLNMYMKCGCLE 464
++AN LL A + +LN + +HGH + + + I + + L Y CGC+
Sbjct: 75 LIANVHRCDSLLRHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVP 134
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG-FKPDGVAFVAVLSAC 523
+F+ + L WN++I Y G +AL F+ MI +G F PD F V+ AC
Sbjct: 135 LARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKAC 194
Query: 524 SHAGLVNEG 532
S ++N G
Sbjct: 195 SVMSMLNVG 203
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 216/725 (29%), Positives = 363/725 (50%), Gaps = 120/725 (16%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFD-ARNVFETA--PFDCKSSSL 98
K++ Q K +H +++ G ++ ++S+Y LFD A+NVF+ PF+
Sbjct: 17 KSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVS-CNLFDYAKNVFDVIENPFEIS---- 71
Query: 99 LWNSILRVNVSNGLYENALKLYVKMRKLGVL-GDGFTFPLVIRACKFMGSFRFRFSFGQI 157
L N ++ N +Y+ AL L+ K+ L D +T+P V++AC G R R GQ+
Sbjct: 72 LCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKAC---GGLR-RVVLGQM 127
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H +++ G ++ + + L+GMYAK + + KLFD++ K+ WN + S + +
Sbjct: 128 IHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGK 187
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHAR---------------------------- 249
+ AL F M G EP+ VT T+ +SS AR
Sbjct: 188 FEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAA 247
Query: 250 -------CGRLEETMDLFDMMRKR-------------------------------GIEVG 271
CG+LE +++F+ M + G++
Sbjct: 248 LVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPT 307
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
+ L C+ A GK +HG++I+ + +F+ ++L+ +Y K G V+ A+ +F
Sbjct: 308 LTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFK 367
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+ + VSWN +I+ Y G +A+ +F ++ K S P+ I++++V+ A
Sbjct: 368 LMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSK----SFVEPDAITFTSVLAA----- 418
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
C++ AAL GREIH +V ++ N +V
Sbjct: 419 ------------------------------CSQLAALEKGREIHNLIVERNLGNNEVVMG 448
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
LL+MY KCG +EE VF+ + ++DL++W SMI+ YG +G AL F EM+++ KP
Sbjct: 449 ALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKP 508
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D V F+A+LSACSHAGLV++G F+ M+ + I P++EHY+C++ LLGRAG L EA +I
Sbjct: 509 DRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEI 568
Query: 572 VKNMP-MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
+++ P + + + TL ++CR+HKN D+ +A + + + +Y++LSN+YA+ G+
Sbjct: 569 LQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGK 628
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
W++ VR K GLKK G SWIE+ KI F ++ L+ + +L L ME+
Sbjct: 629 WDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYLTSHMED 688
Query: 691 KGCVP 695
+ C P
Sbjct: 689 E-CKP 692
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 182/507 (35%), Positives = 281/507 (55%), Gaps = 25/507 (4%)
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
M SG+ N D A +LF +M E + +W +L+ + R L+ LF+ M +R
Sbjct: 1 MISGYLRNHKFDLARDLFDKMP----ERDLFSWNVMLTGYVRNRDLKTARALFERMPERD 56
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
I A++ + D ++ + +K G N L+ Y ++G ++ A+
Sbjct: 57 I---VSWNAMLSGYAQNGFVDEAREIFYKMPLKNGIS-----WNGLLAAYVQNGRIEDAK 108
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
LF + +VSWN L+ G + +F + + D ISWSA+I +
Sbjct: 109 RLFESKMDWTLVSWNCLM-----GGFVRKRRNLFDNMPQRDS--------ISWSAMIAGY 155
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
+ NG EEAL F +MQ N + + LS C+ AAL +GR++H +V+
Sbjct: 156 SQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGW 215
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
V N LL MY KCG ++E F++I +KD+++WN+MI GY +G GE AL FE M
Sbjct: 216 YVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTT 275
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
G +PD V+VL+ACSHAGLV++G F M R++ I ++ HY CMVDLLGRAG L+E
Sbjct: 276 GIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEE 335
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A +++KNMP EP+A WG LL + R+H NT++ E A IF + +G Y+LLS +YAA
Sbjct: 336 AQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAA 395
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
SGRW DA K+R+ + KG+KKV G SW+EV+ KIH F G++ + LEE+ L+
Sbjct: 396 SGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLK 455
Query: 688 MENKGCVPDNDIILWEMMGKKNVKRIQ 714
++ +G + +++ ++ ++ V ++
Sbjct: 456 LKQEGYISSTNLVFHDVEEEEKVHMLK 482
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 154/335 (45%), Gaps = 59/335 (17%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+L+ Y R L AR +FE P + + WN++L NG + A +++ KM
Sbjct: 32 MLTGYVRNRDLKTARALFERMP---ERDIVSWNAMLSGYAQNGFVDEAREIFYKM----P 84
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
L +G ++ N L+ Y + G++
Sbjct: 85 LKNGISW---------------------------------------NGLLAAYVQNGRIE 105
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
D+ +LF+ +SWN + GF LF M + + ++W+++++ ++
Sbjct: 106 DAKRLFESKMDWTLVSWNCLMGGFVRK-----RRNLFDNMP----QRDSISWSAMIAGYS 156
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ G EE + F M++ + + LS C+++AA +G+ +H ++K G++ +
Sbjct: 157 QNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWY 216
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V NAL+ +Y K G + A++ F EI EK++VSWN +I YA G +EA+ VF +L K
Sbjct: 217 VGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVF-ELMKTT 275
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
G RP+ + +V+ A + G ++ + F M
Sbjct: 276 G---IRPDDATMVSVLAACSHAGLVDQGSEYFYSM 307
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/402 (19%), Positives = 176/402 (43%), Gaps = 62/402 (15%)
Query: 83 RNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
RN+F+ P + S+ W++++ NG E AL +V+M++ + +F + C
Sbjct: 134 RNLFDNMP---QRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTC 190
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ + G+ +H +++ G+Q ++ N L+ MY K G + ++ F ++ K+
Sbjct: 191 SNIAAL----ELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDV 246
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-D 261
+SWN M G+A + + AL +F+ M+ G+ P+ T S+L++ + G +++ + F
Sbjct: 247 VSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYS 306
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
M R GI K++H ++ + G+ G
Sbjct: 307 MNRDYGI---------------------TAKLVH--------------YTCMVDLLGRAG 331
Query: 322 DVKVAQNLFSEIE-EKNIVSWNALITS---YAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
++ AQNL + E + +W AL+ + + L ++A ++ ++E + G
Sbjct: 332 QLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSG------- 384
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
+ + +A++GR +A + ++++ V L V + +G H H
Sbjct: 385 -MYILLSKLYAASGRWSDAGKM--RLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSHPH 441
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
++ ++ L + + G + +LVF +E+++ +
Sbjct: 442 TDKIY----TFLEEMDLKLKQE-GYISSTNLVFHDVEEEEKV 478
Score = 46.6 bits (109), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L C I L +Q+H +L+ G ++ +L++Y + G + +AR+ F+
Sbjct: 183 FTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEI- 241
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+ + WN+++ +G E AL ++ M+ G+ D T V+ AC G
Sbjct: 242 --LEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAG 295
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 214/731 (29%), Positives = 359/731 (49%), Gaps = 115/731 (15%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++++ C K++ K VH + + G F+ + ++ +YA G L DA+ +F+ P
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ S+LWN +L V NG NA+K++++MR + + TF V+ C +
Sbjct: 121 ---QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVC----ASEA 173
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G +H + G + + + N L+ MY+K + + KLFD + +SWN + S
Sbjct: 174 MLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIIS 233
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
G+ N A LF+ M G++P+ +T+ S L + E + L
Sbjct: 234 GYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPC------VNELLSL----------- 276
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
H K IHG++I+ VF+K+ALI +Y K DV++AQ +
Sbjct: 277 -----------------KHC-KEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKIL 318
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS- 389
+ + V +I+ Y G EA+E F L + +P +++S++ AFA
Sbjct: 319 CQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ----ERMKPTSVTFSSIFPAFAGL 374
Query: 390 ---------NGR------------GEEALDLFRK---MQLAKVVANSVT------ISGLL 419
+G G LD++ K + LA V N +T + ++
Sbjct: 375 AALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMI 434
Query: 420 SVCAESA-----------------------------------ALNIGREIHGHVVRVSMN 444
+ C+++ AL+ G+EIHG +++ +
Sbjct: 435 TSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLR 494
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
++ ++ L++MY KCG L VF+++++++ ++WNS+IS YG +G + LA F EM
Sbjct: 495 SDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEM 554
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+ G +PD V F+ ++SAC HAG V+EG R + +M E+ I +MEHYAC+ D+ GRAG
Sbjct: 555 LRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGR 614
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNI 624
L EA + + +MP P+A VWGTLL +C +H N ++AE + +F L +G Y+LL+N+
Sbjct: 615 LDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANV 674
Query: 625 YAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
A +G+W KVR K +G++KV G SWIEV HMF + + + VL+ L
Sbjct: 675 QAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSL 734
Query: 685 ALQMENKGCVP 695
L+++ +G VP
Sbjct: 735 LLELKKEGYVP 745
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 241/520 (46%), Gaps = 83/520 (15%)
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+Y R G L DA+N+F T C S+ WN ++R G + AL Y+KM GV D
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSA---WNWMIRGFTMMGQFNYALLFYLKMLGAGVSPD 57
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
+TFP V++AC + S + G+IVH V MG + +V + + LI +YA+ G +SD+
Sbjct: 58 KYTFPYVVKACCGLKSVKM----GKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQ 113
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
LFD + K+ + WN+M +G+ N D A+++F M ++PN VT+
Sbjct: 114 YLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTF----------- 162
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
A VLSVCA A +G +HG + G E V N
Sbjct: 163 ------------------------ACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVAN 198
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
L+ +Y K ++ A+ LF + ++VSWN +I+ Y + GL EA
Sbjct: 199 TLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEH------------ 246
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
LFR M A + +S+T + L E +L
Sbjct: 247 ---------------------------LFRGMISAGIKPDSITFASFLPCVNELLSLKHC 279
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
+EIHG+++R ++ ++ +++ L+++Y KC +E + Q D + +MISGY +N
Sbjct: 280 KEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLN 339
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G + AL F +++ KP V F ++ A + +N G+ + +++ +++ +
Sbjct: 340 GKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKT-KLDEKCHV 398
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
+ ++D+ + G L A + N E +A W +++ SC
Sbjct: 399 GSAILDMYAKCGRLDLACRVF-NRITEKDAICWNSMITSC 437
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 177/378 (46%), Gaps = 56/378 (14%)
Query: 29 SLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
S L C + LL ++ K++H +I FL + ++ IY F R+V
Sbjct: 265 SFLPCVNELL----SLKHCKEIHGYIIRHAVVLDVFLKSALIDIY------FKCRDVEMA 314
Query: 89 APFDCKSSS---LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
C+SSS ++ +++ V NG + AL+ + + + + TF + A +
Sbjct: 315 QKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGL 374
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
+ + G+ +H +++ H+ + ++ MYAK G++ + ++F+++ K+ I W
Sbjct: 375 AAL----NLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICW 430
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
N M + + N A+ LF++M +EG + V+
Sbjct: 431 NSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVS-------------------------- 464
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
I+ LS CA+L A H GK IHG +IKG ++ +++LI +Y K G++
Sbjct: 465 ---------ISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNF 515
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
++ +F ++E+N VSWN++I++Y G E + +F ++ L G +P+ +++ +I
Sbjct: 516 SRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEM--LRNGI--QPDHVTFLGIIS 571
Query: 386 AFASNGRGEEALDLFRKM 403
A G+ +E + + M
Sbjct: 572 ACGHAGQVDEGIRYYHLM 589
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY++ G L++ +F ++ WN MI G+ M G AL + +M+ AG PD
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
F V+ AC V G+ + + V ++ + + ++ L G L +A + N+
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHE-TVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
P + ++ +W +LN KN D A+
Sbjct: 120 P-QKDSVLWNVMLNG--YVKNGDSGNAI 144
>gi|242048970|ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
gi|241925606|gb|EER98750.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
Length = 686
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 200/681 (29%), Positives = 337/681 (49%), Gaps = 99/681 (14%)
Query: 45 HQLKQVHNQLIVTG-ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
H+ +TG +A + ++ + R GR+ DA +F + S+ +N++
Sbjct: 16 HRRPAAPADACITGKPDAEVIRRNKAITAHMRAGRVPDAERLFAAM---SRRSTSTYNAM 72
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF------------RFR 151
L +NG AL + + + D F++ ++ A S +
Sbjct: 73 LGGYAANGRLTLALSFFRSIPR----PDSFSYNTLLHALGVSSSLADARALFDEMPVKDS 128
Query: 152 FSFGQIVHNHV-----------LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
S+ ++ +H + + + N ++ Y + G++ ++ LFD
Sbjct: 129 VSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYIRNGRIQEARDLFDSRTEW 188
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
+ ISWN + +G+ + A ++F RM + + V+W +++S HAR G + E LF
Sbjct: 189 DAISWNALMAGYVQCSQIEEAQKMFNRMP----QRDVVSWNTMVSGHARRGDMAEARRLF 244
Query: 261 DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
D+ R + AVV + + +V K NA++ Y +
Sbjct: 245 DVAPIRDVFTW---TAVVSGYAQNGMLEEAKRVFDAMPEKNAVS-----WNAMMAAYVQR 296
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
++ A+ LF + +N+ SWN ++T YA+AG+ DEA +F + + D +SW
Sbjct: 297 RMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFDMMPQKDA--------VSW 348
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+A++ A++ G EE L LF++M
Sbjct: 349 AAMLAAYSQGGFSEETLQLFKEM------------------------------------- 371
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
G MY KCG +EE H FE++E++D+++WN+MI+GY +G G+ AL
Sbjct: 372 -----------GRCAMYFKCGNMEEAHSAFEEMEERDIVSWNTMIAGYARHGFGKEALEV 420
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F+ M + KPD + V VL+ACSH+GLV +G F M R+F + + EHY CM+DLLG
Sbjct: 421 FDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVTAKPEHYTCMIDLLG 480
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML 620
RAG L EA +++K+MP EP++ +WG LL + R+H+N+++ A +IF L E G Y+L
Sbjct: 481 RAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVL 540
Query: 621 LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEV 680
LSNIYA+SG+W D K+R+ +G+KKV G SWIEV+ K+H FS G+S+ + +++
Sbjct: 541 LSNIYASSGKWRDVDKMRLMMHERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYGF 600
Query: 681 LEELALQMENKGCVPDNDIIL 701
LE+L ++M+ G V D++L
Sbjct: 601 LEDLDIRMKKAGYVSATDMVL 621
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 192/648 (29%), Positives = 340/648 (52%), Gaps = 81/648 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ H+ + TG + ++ + +L++Y + G +FDAR +F+ P + +++ W +++
Sbjct: 138 KQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMP---ERNTVSWATMISGY 194
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
S+ + + A++++ MR+ + + F V+ A + S F ++ G+ VH+ ++ G
Sbjct: 195 ASSDIADKAVEVFELMRREEEIQNEFALTSVLSA---LTSDVFVYT-GRQVHSLAIKNGL 250
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
V + N L+ MYAK G + D+ + F+ FSG
Sbjct: 251 LAIVSVANALVTMYAKCGSLDDAVRTFE-------------FSG---------------- 281
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
+ N +TW+++++ +A+ G ++ + LF+ M G+ + V++ C+DL A
Sbjct: 282 ------DKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCA 335
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
GK +H F K GF ++V +A++ +Y K G + A+ F +++
Sbjct: 336 VVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQ------------ 383
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
P+V+ W+++I + NG E L+L+ KMQ+ +
Sbjct: 384 ---------------------------PDVVLWTSIITGYVQNGDYEGGLNLYGKMQMER 416
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
V+ N +T++ +L C+ AAL+ G+++H +++ + + + L MY KCG L++G+
Sbjct: 417 VIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGY 476
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
L+F ++ +D+I+WN+MISG NG G AL FE+M+ G KPD V FV +LSACSH G
Sbjct: 477 LIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMG 536
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
LV+ G F MM EF I P +EHYACMVD+L RAG L EA + +++ ++ +W L
Sbjct: 537 LVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRIL 596
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
L +C+ H+N ++ ++ L + + +Y+LLS+IY A G E+ +VR K +G+
Sbjct: 597 LGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVN 656
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
K G SWIE+K +H+F G++ + + LE L M ++G P
Sbjct: 657 KEPGCSWIELKGLVHVFVVGDNQHPQVDEIRLELELLTKLMIDEGYQP 704
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/442 (23%), Positives = 193/442 (43%), Gaps = 84/442 (19%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV--KNYISWNMMFSGF 212
G+ +H +L+ G ++++ N + +YAK +S + LFD + K+ +SWN + + F
Sbjct: 30 GRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAF 89
Query: 213 ALNFDCDG---ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+ N A+ LF+RM MR +
Sbjct: 90 SQNHSSSSSSFAISLFRRM----------------------------------MRANNVI 115
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
A +A V S ++L+ GK H +K G V+V ++L+ +Y K G V A+ L
Sbjct: 116 PNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKL 175
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
F + E+ N +SW+ +I +AS
Sbjct: 176 FDRMPER---------------------------------------NTVSWATMISGYAS 196
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
+ ++A+++F M+ + + N ++ +LS + GR++H ++ + + V
Sbjct: 197 SDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSV 256
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
N L+ MY KCG L++ FE K+ ITW++M++GY G + AL F +M +G
Sbjct: 257 ANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGV 316
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY--ACMVDLLGRAGLLQE 567
P V V++ACS V EG+++ F++ ++ Y + +VD+ + G L +
Sbjct: 317 LPSEFTLVGVINACSDLCAVVEGKQMHSF---AFKLGFGLQLYVLSAVVDMYAKCGSLAD 373
Query: 568 ASDIVKNMPMEPNAYVWGTLLN 589
A + + +P+ +W +++
Sbjct: 374 ARKGFECV-QQPDVVLWTSIIT 394
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 102/225 (45%), Gaps = 22/225 (9%)
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI--EKKDLI 479
C + + GR +H +++ +I V N LN+Y K L +F+ I KD +
Sbjct: 21 CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDV 80
Query: 480 TWNSMISGYGMNGLGEN---ALATFEEMIEA-GFKPDGVAFVAVLSACSHAGLVNEGRRI 535
+WNS+I+ + N + A++ F M+ A P+ V SA S+ V G++
Sbjct: 81 SWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
+ V+ + + ++++ + G + +A + MP E N W T+++ +
Sbjct: 141 HSVAVKT-GCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMP-ERNTVSWATMISG---YA 195
Query: 596 NTDVAEAMASQIFGLITE----------TTGSYMLLSNIYAASGR 630
++D+A+ A ++F L+ T+ L S+++ +GR
Sbjct: 196 SSDIADK-AVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGR 239
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 180/562 (32%), Positives = 309/562 (54%), Gaps = 49/562 (8%)
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
D TFP +++AC ++R +G V HV ++GF +V +VN + ++ G M +
Sbjct: 120 DHLTFPFLLKAC---ARLQYR-PYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLA 175
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
+LFD+ ++ +S W +L+ + R
Sbjct: 176 RRLFDESPARDVVS-----------------------------------WNTLIGGYVRS 200
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVV--LSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
G E ++LF + + G V + + ++ +S CA + +GK +H FV G V
Sbjct: 201 GLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVR 260
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
+ NA++ +Y K G +++A+++F I+ K +VSW +I +A G+ ++A +F ++ + D
Sbjct: 261 LMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERD 320
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
V W+A++ + N +G+EA+ LF +MQ +KV N +T+ LLS C++ AL
Sbjct: 321 --------VFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGAL 372
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+G +H ++ R + ++ + L++MY KCG +++ +F++I K+ +TW +MI G
Sbjct: 373 EMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGL 432
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
+G + A+ F+ MI+ G +PD + F+ VLSAC HAGLV EGR+ F +M ++ +E +
Sbjct: 433 ANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERK 492
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
M+HY+CM+DLLGRAG L EA +V MPM+P+A VWG L +CRMH N + E A ++
Sbjct: 493 MKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLV 552
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L +G Y+LL+N+YA + + A KVR+ + G++KV G S IE+ +H F +
Sbjct: 553 ELDPSDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKD 612
Query: 669 SLQSDLKNVCEVLEELALQMEN 690
D + + L + LQM++
Sbjct: 613 KSHLDTIAIYDCLHGITLQMKH 634
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 167/349 (47%), Gaps = 17/349 (4%)
Query: 58 GANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENAL 117
G +A F+ + ++ G + AR +F+ +P + WN+++ V +GL AL
Sbjct: 151 GFSADVFVVNAGVHFWSVSGSMVLARRLFDESP---ARDVVSWNTLIGGYVRSGLPREAL 207
Query: 118 KLYVKMRKLG--VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVN 175
+L+ ++ + G V D T + C MG G+ +H V G + V ++N
Sbjct: 208 ELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLE----LGKRLHEFVDSKGVRCTVRLMN 263
Query: 176 ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
++ MY K G + + +F+++ K +SW M G A + A LF M E
Sbjct: 264 AVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMP----ER 319
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
+ W +L++ + + + +E + LF M++ ++ + +LS C+ L A MG +H
Sbjct: 320 DVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVH 379
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
++ + V + +L+ +Y K G++K A +F EI +KN ++W A+I A G D
Sbjct: 380 HYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHAD 439
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
EA+E F ++ +D G +P+ I++ V+ A G +E F M
Sbjct: 440 EAIEYFQRM--IDLGL--QPDEITFIGVLSACCHAGLVKEGRQFFSLMH 484
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 100/194 (51%), Gaps = 7/194 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
+AR G + DAR +F+ P + WN+++ V N + A+ L+ +M++ V +
Sbjct: 300 HARLGMMEDARMLFDEMP---ERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNE 356
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
T ++ AC +G+ G VH+++ + +V + L+ MYAK G + +
Sbjct: 357 ITMVNLLSACSQLGALEM----GMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAIC 412
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+F ++ KN ++W M G A + D A+E F+RM GL+P+ +T+ +LS+ G
Sbjct: 413 IFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGL 472
Query: 253 LEETMDLFDMMRKR 266
++E F +M ++
Sbjct: 473 VKEGRQFFSLMHEK 486
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 188/585 (32%), Positives = 312/585 (53%), Gaps = 52/585 (8%)
Query: 110 NGLYENALKLYVKMRKLGVL-GDGFTFPLVIRACKFMGSFRFR-FSFGQIVHNHVLQMGF 167
+G+ L LY + + G D TFP +++AC R R + +G HVL++G
Sbjct: 102 HGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACA-----RLREWGYGDAALAHVLRLGL 156
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+V +VN + G M D+ +LFD+ V++
Sbjct: 157 DSDVFVVNAATHFLSIRGPMEDARRLFDRSPVRD-------------------------- 190
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV--CADL 285
V+W +L+ + R G E ++LF M V + + ++ +V C +
Sbjct: 191 ---------LVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQM 241
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+G+ +HGFV G V + NAL+ +Y K G +++A+++F IE + +VSW +I
Sbjct: 242 RDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMI 301
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+A+ GL D+A +VF ++ + D V W+A++ + + +EAL LF +MQ
Sbjct: 302 VGFAKFGLMDDARKVFDEMPERD--------VFPWNALMTGYVQCKQCKEALSLFHEMQE 353
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
A VV + +T+ LL+ C++ AL +G +H ++ + + ++ + L++MY KCG +E+
Sbjct: 354 ASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEK 413
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
+F++I +K+ +TW +MI G +G A+ F MIE G KPD + F+ VLSAC H
Sbjct: 414 AIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCH 473
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
AGLV EGR F +M ++ +E +M+HY+CM+DLLGRAG L EA +V MPMEP+A VWG
Sbjct: 474 AGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWG 533
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
+ +CRM N + E A ++ + +G Y+LL+N+YA + + A KVR + G
Sbjct: 534 AIFFACRMQGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVRAMMRHLG 593
Query: 646 LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
++KV G S IE+ +H F + D + + L E+ LQ+++
Sbjct: 594 VEKVPGCSCIELNGVVHEFIVKDKSHMDSHAIYDCLHEITLQIKH 638
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
+A+FG + DAR VF+ P + WN+++ V + AL L+ +M++ V+ D
Sbjct: 304 FAKFGLMDDARKVFDEMP---ERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDE 360
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
T ++ AC +G+ G VH ++ + +V + LI MYAK G + +
Sbjct: 361 ITMVNLLTACSQLGAL----EMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIH 416
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+F ++ KN ++W M G A + + A+E F+ M G +P+ +T+ +LS+ G
Sbjct: 417 IFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGL 476
Query: 253 LEETMDLFDMMRKR 266
++E + F +M +
Sbjct: 477 VKEGREFFSLMETK 490
>gi|356546772|ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Glycine max]
Length = 713
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 213/719 (29%), Positives = 363/719 (50%), Gaps = 83/719 (11%)
Query: 39 QQCKTIHQ-----------LKQVHN-QLIVTGANASAFLAARVLSIY--ARFGRLFDARN 84
Q +T+H+ L Q HN I +G S FL I R G + +A +
Sbjct: 3 QHSRTLHKRITKLNLFQSKLNQSHNNDSINSGGKGSKFLIQCNTQIAENGRNGNVKEAES 62
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
+F P +S W ++L NG +NA +L+ +M + + + IR
Sbjct: 63 IFHKMPIKNTAS---WTAMLTAFAQNGQIQNARRLFDEMPQRTTVSNNAMISAYIRNGCN 119
Query: 145 MGSFRFRFSF---GQIVHNHVLQMGF--QGNVHIV-----------------NELIGMYA 182
+G FS +V + MGF G H+ N LI Y
Sbjct: 120 VGKAYELFSVLAERNLVSYAAMIMGFVKAGKFHMAEKLYRETPYEFRDPACSNALINGYL 179
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
KMG+++++ ++F+ + ++ +SW+ M G + A +LF RM + N V+W++
Sbjct: 180 KMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAAARDLFDRMP----DRNVVSWSA 235
Query: 243 LLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
++ + G +E LF DM R+ +EV + + ++ C + G IHG V +
Sbjct: 236 MIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACGNCGRMSEGMQIHGLVSRL 295
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
GFE + N++I +Y G +A +F + +K+IV+WN+LI+ Y + A VF
Sbjct: 296 GFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISGYIHNNEVEAAYRVF 355
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
G M +VISW+A+I F+ +GR E A++LF + + ISG ++
Sbjct: 356 --------GRMPVKDVISWTAMIAGFSKSGRVENAIELFNMLPAKDDFVWTAIISGFVNN 407
Query: 422 CAESAAL-------------------------------NIGREIHGHVVRVSMNKNILVQ 450
AL N G +IH ++++++ N+ +Q
Sbjct: 408 NEYEEALHWYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIHTCILKMNLEYNLSIQ 467
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
N L++ Y K G + + + +F + + ++I++NS+ISG+ NG G+ AL +++M G +
Sbjct: 468 NSLISFYSKSGNVVDAYRIFLDVIEPNVISYNSIISGFAQNGFGDEALGIYKKMQSEGHE 527
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
P+ V F+AVLSAC+HAGLV+EG IF+ M + IEP+ +HYACMVD+LGRAGLL EA D
Sbjct: 528 PNHVTFLAVLSACTHAGLVDEGWNIFNTMKSHYGIEPEADHYACMVDILGRAGLLDEAID 587
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
++++MP +P++ VWG +L + + H D+A+ A +I L + Y++LSN+Y+A+G+
Sbjct: 588 LIRSMPFKPHSGVWGAILGASKTHLRLDLAKLAAQRITDLEPKNATPYVVLSNMYSAAGK 647
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
D V+++ KG+KK G SWI +K K+H+F +G+ ++ + + + +M+
Sbjct: 648 KIDGDLVKMAKNLKGIKKSPGCSWITMKNKVHLFLAGDQSHGSIEEIKTTILTMDREMQ 706
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 204/687 (29%), Positives = 352/687 (51%), Gaps = 68/687 (9%)
Query: 10 HQFSP----SNPSRP-----FSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGAN 60
H F P S+P +P ++ N +LL +LQ C ++ QLKQ+ + TG
Sbjct: 27 HSFRPLSTSSSPGKPKWNSLSNVFISNPTLL-----ILQSCSSMFQLKQIQAHITCTGLM 81
Query: 61 ASAFLAARVLSIYA--RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
F A+R+L+ A G + A +F+ + WN++++
Sbjct: 82 NQIFPASRLLAFCALSDSGDIHYAHLIFDQTEL---PNCFFWNTMIKGYCKANHPSMGFS 138
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
+ +M + D +F ++AC G F + G VH+ + + GF ++ + N LI
Sbjct: 139 FFRQMIRNRAEFDSGSFVFALKAC---GQFAEKI-VGMAVHSVIWKRGFDSDLFVQNGLI 194
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
Y + G + + ++FD+ VK+ V
Sbjct: 195 QNYVETGCLGFARQMFDESSVKD-----------------------------------VV 219
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
TWT++++ +AR L+E + LF+ M ++ + +LS C+ MGK +H +
Sbjct: 220 TWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHI 279
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
+ + + NA++ +Y K G + A+ +F+ +E +++ SW +L+ YA+ G A
Sbjct: 280 RRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSAR 339
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM-QLAKVVANSVTISG 417
++F + M N++SW+A+I ++ N + EAL+LF M + +V T+
Sbjct: 340 KLFDE--------MPERNIVSWNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVC 391
Query: 418 LLSVCAESAALNIGREIH-GHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
+LS + L +G+EIH HV ++ + +++++N +++MY KCG ++ +F + +K
Sbjct: 392 VLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEK 451
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
+L++WNSMIS Y G + AL F++MI +G KPD + F+ VLSACS+ G V+EG+ F
Sbjct: 452 NLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYGGFVSEGQAHF 511
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
+ M F +EP+ EHYACMVDLL R GLL+EA +++ MPME + WG LL++CR H N
Sbjct: 512 ESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPMEASEGGWGALLDACRKHGN 571
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
++A+ ++ L E +G Y LL+NI A +W+D VR + +G+KKV G S IE
Sbjct: 572 VEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWKDVRMVRRMMRERGVKKVPGHSLIE 631
Query: 657 VKRKIHMFSSGNSLQSDLKNVCEVLEE 683
++ K H F ++ + + V+ E
Sbjct: 632 IEGKFHEFLVADTSHTRSSEIYRVVNE 658
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 194/648 (29%), Positives = 338/648 (52%), Gaps = 46/648 (7%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP------- 90
L+ C + Q +Q+H+ ++ G +++ F+ ++++YA+ G + DA+ +F+ P
Sbjct: 279 LKYCSSSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISC 338
Query: 91 -------------------FDC--KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL 129
FD + + +++ V N + AL+++ MR GV+
Sbjct: 339 NIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVV 398
Query: 130 GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD 189
+ T VI AC G +++H +++ +G V + L+ Y + +
Sbjct: 399 PNDLTLVNVIYACSHFGEILN----CRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGE 454
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
+ +LFD++ N +SWN+M +G+A D A ELF+R+ + + ++W +++ +
Sbjct: 455 ARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVP----DKDVISWGTMIDGYIL 510
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFV 309
RL E + ++ M + G+ + + ++S C L A G +HG V+K GF+ Y F+
Sbjct: 511 MNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFI 570
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
+ +I Y G + +A F + ++ SWNAL++ + + + D+A ++F + + D
Sbjct: 571 QTTIIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERD- 629
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
V SWS +I +A + AL+LF KM + + N VT+ + S A L
Sbjct: 630 -------VFSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLK 682
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK--DLITWNSMISG 487
GR H ++ S+ N ++ L++MY KCG + F QI K + WN++I G
Sbjct: 683 EGRWAHEYICNESIPLNDNLRAALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICG 742
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
+G L F +M KP+ + F+ VLSAC HAGLV GRRIF +M + +EP
Sbjct: 743 LASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEP 802
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
++HY CMVDLLGRAGLL+EA +++++MPM+ + +WGTLL +CR H + ++ E A +
Sbjct: 803 DIKHYGCMVDLLGRAGLLEEAEEMIRSMPMKADIVIWGTLLAACRTHGDVNIGERAAESL 862
Query: 608 FGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
GL G +LLSNIYA +GRWED + VR + + + ++++ G S +
Sbjct: 863 AGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRAIQNQRMERMPGCSGV 910
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 137/300 (45%), Gaps = 42/300 (14%)
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
A+ L C+ + G+ +H V+K G F++N+LI +Y K G +K AQ LF
Sbjct: 274 ALVSALKYCS---SSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDAC 330
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
N +S N ++ YA+AG D A ++F M +S++ +I N
Sbjct: 331 PTLNPISCNIMVCGYAKAGQLDNARKLFD--------IMPDKGCVSYTTMIMGLVQNECF 382
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR--------VSMN- 444
EAL++F+ M+ VV N +T+ ++ C+ + R IH ++ VS N
Sbjct: 383 REALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNL 442
Query: 445 ----------------------KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
N++ N +LN Y K G ++ +FE++ KD+I+W
Sbjct: 443 MRAYCLCSGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWG 502
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
+MI GY + AL + M+ +G + + V ++SAC + +G ++ M+V++
Sbjct: 503 TMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKK 562
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 178/461 (38%), Positives = 271/461 (58%), Gaps = 12/461 (2%)
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL--AADHMGKVIH 295
V+WTS ++ R GRL E F M G+E +LS C D ++ +G ++H
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 296 GFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
G+ K G + ++V V A+I +Y K G K A+ +F +E+KN V+WN +I Y +G
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
D A ++F ++ + D +ISW+A+I F G EEAL FR+MQ++ V + V
Sbjct: 157 DNAAKMFDKMPERD--------LISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
I L+ C AL+ G +H +V+ N+ V N L+++Y +CGC+E VF +E
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
K+ +++WNS+I G+ NG +L F +M E GFKPD V F L+ACSH GLV EG R
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F +M ++RI P++EHY C+VDL RAG L++A +V++MPM+PN V G+LL +C H
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Query: 595 KNTDV-AEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
N V AE + + L ++ +Y++LSN+YAA G+WE A+K+R K GLKK G S
Sbjct: 389 GNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
IE+ +H+F +G++ + + EVLE ++ + +GCV
Sbjct: 449 SIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCV 489
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 166/326 (50%), Gaps = 13/326 (3%)
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF-RFSF 154
+++ W S + + NG A K + M GV + TF ++ C G F +
Sbjct: 35 TTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC---GDFTSGSEAL 91
Query: 155 GQIVHNHVLQMGFQGN-VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G ++H + ++G N V + +IGMY+K G+ + +FD + KN ++WN M G+
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYM 151
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ D A ++F +M E + ++WT++++ + G EE + F M+ G++
Sbjct: 152 RSGQVDNAAKMFDKMP----ERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYV 207
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
AI L+ C +L A G +H +V+ F++ V V N+LI +Y + G V+ A+ +F +
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
E++ +VSWN++I +A G E++ F ++++ +P+ ++++ + A + G
Sbjct: 268 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQE----KGFKPDAVTFTGALTACSHVGLV 323
Query: 394 EEALDLFRKMQLAKVVANSVTISGLL 419
EE L F+ M+ ++ + G L
Sbjct: 324 EEGLRYFQIMKCDYRISPRIEHYGCL 349
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH ++ + ++ ++ +Y R G + AR VF K + + WNS++ +
Sbjct: 228 VHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME---KRTVVSWNSVIVGFAA 284
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
NG +L + KM++ G D TF + AC +G + QI+
Sbjct: 285 NGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK---CDYRISP 341
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
+ L+ +Y++ G++ D+ KL + +K
Sbjct: 342 RIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
>gi|326516644|dbj|BAJ92477.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518576|dbj|BAJ88317.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 867
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 204/703 (29%), Positives = 339/703 (48%), Gaps = 56/703 (7%)
Query: 48 KQVHNQLIVTG-ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
Q+H+ + G A +A + + R GR R + D ++LWN + +
Sbjct: 94 PQLHSLAVRAGHATREPHVACALADLLERLGRGASGRRLLAEGDGDDWKDAVLWNKQVAM 153
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
G ++ A+ + +MR GV DG+ + AC G R G+ VH H L++G
Sbjct: 154 LAEAGDWDGAIAAFREMRARGVAADGYACARALHACGRAG----RRLEGRAVHAHALRVG 209
Query: 167 F-QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
+ + L GMYA+ ++ + + + ++WN + + D ALEL
Sbjct: 210 LVDAHPLVPGFLAGMYAEGADVAAATTVLLRTAGAGVVAWNAVIACCVRLGLVDDALELA 269
Query: 226 KRMEL-----EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
+RM E EP TW ++LS AR GR E + + M ++GI A ++ +L
Sbjct: 270 ERMARDAETSEAAEPTLATWNTVLSGCARHGRDREALAVVRRMLEQGILPDAATVSSLLK 329
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
A+ + G +H F ++ G + AL+ +Y K G + +AQ +F +E +N+ +
Sbjct: 330 SVANSGSLGHGTEVHCFFLRHGLSPDAYTGTALVDMYAKCGRLDIAQRVFDGLEHRNLAT 389
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEK--LDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
WN+L+ +A AG D A+E+ +++ +D PNV +W+ +I +A NG +A+
Sbjct: 390 WNSLVAGHANAGHFDRALELVEAMKRHRID------PNVTTWNGLITGYAMNGLSSQAML 443
Query: 399 LFRKMQLAKVVANSVT----ISG-------------------------------LLSVCA 423
L R+++ A V N V+ ISG LL CA
Sbjct: 444 LLRQIKSAGVAPNVVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACA 503
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
A L G+E+H +R + + ++V L++MY K G L VF +++ K+L+ N+
Sbjct: 504 GLALLTKGKELHCFALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQGKNLVCCNA 563
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
M++G ++G A A F +M +G KPDG+ F A+L+AC GLV E D M ++
Sbjct: 564 MLTGLAVHGQAHEAAALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKY 623
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+ P EH+ACMVDLL R G L EA ++ P EP A WG LL C +H N D+AE+
Sbjct: 624 GVAPTAEHHACMVDLLARRGYLDEAMAFIERSPAEPGASSWGALLTGCAIHGNLDLAESA 683
Query: 604 ASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHM 663
A +F L + +Y+ + ++Y +++A ++ + K +G+ G SW + R IH+
Sbjct: 684 ARHLFKLEPHNSANYLAMMSLYEQHQMFDEAESLKYAMKARGVDARPGWSWTQAGRSIHV 743
Query: 664 F--SSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
F G+S + + + + L QM G VPD I +++
Sbjct: 744 FEVDGGSSPHPETPEIYDEMSRLVSQMRMVGYVPDTGCIAYDV 786
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 113/275 (41%), Gaps = 32/275 (11%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LL+ C + L K++H + + ++ ++ +YA+ G L A+ VF
Sbjct: 498 LLRACAGLALLTKGKELHCFALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQ--- 554
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + N++L +G A L+ M + G+ DG TF ++ AC+ MG +
Sbjct: 555 GKNLVCCNAMLTGLAVHGQAHEAAALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWE 614
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGF 212
+ + + + G ++ + A+ G + ++ ++ + SW + +G
Sbjct: 615 Y---LDDMEAKYGVAPTAEHHACMVDLLARRGYLDEAMAFIERSPAEPGASSWGALLTGC 671
Query: 213 ALNFDCD----GALELFKRMELEGLEP-NFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
A++ + D A LFK LEP N + +++S + + +E L M+ RG
Sbjct: 672 AIHGNLDLAESAARHLFK------LEPHNSANYLAMMSLYEQHQMFDEAESLKYAMKARG 725
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
++ + G+ IH F + GG
Sbjct: 726 VDAR-----------PGWSWTQAGRSIHVFEVDGG 749
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 215/731 (29%), Positives = 359/731 (49%), Gaps = 115/731 (15%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++++ C K++ K VH + + G F+ + ++ +YA G L DA+ +F+ P
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ S+LWN +L V NG NA+K++++MR + + TF V+ C +
Sbjct: 121 ---QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVC----ASEA 173
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G +H + G + + + N L+ MY+K + + KLFD + + +SWN + S
Sbjct: 174 MLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIIS 233
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
G+ N A LF+ M G++P+ +T+ S L + E + L
Sbjct: 234 GYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPC------VNELLSL----------- 276
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
H K IHG++I+ VF+K+ALI +Y K DV++AQ
Sbjct: 277 -----------------KHC-KEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNL 318
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS- 389
+ + V +I+ Y G EA+E F L + +P +++S++ AFA
Sbjct: 319 CQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQ----ERMKPTSVTFSSIFPAFAGL 374
Query: 390 ---------NGR------------GEEALDLFRK---MQLAKVVANSVT------ISGLL 419
+G G LD++ K + LA V N +T + ++
Sbjct: 375 AALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMI 434
Query: 420 SVCAESA-----------------------------------ALNIGREIHGHVVRVSMN 444
+ C+++ AL+ G+EIHG +++ +
Sbjct: 435 TSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLR 494
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
++ ++ L++MY KCG L VF+++++K+ ++WNS+IS YG +G + LA F EM
Sbjct: 495 SDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEM 554
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+ G +PD V F+ ++SAC HAG V+EG R + +M E+ I +MEHYAC+ D+ GRAG
Sbjct: 555 LRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGR 614
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNI 624
L EA + + +MP P+A VWGTLL +C +H N ++AE + +F L +G Y+LL+N+
Sbjct: 615 LHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANV 674
Query: 625 YAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
A +G+W KVR K +G++KV G SWIEV HMF + + + VL+ L
Sbjct: 675 QAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSL 734
Query: 685 ALQMENKGCVP 695
L+++ +G VP
Sbjct: 735 LLELKKEGYVP 745
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 142/520 (27%), Positives = 241/520 (46%), Gaps = 83/520 (15%)
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+Y R G L DA+N+F T C S+ WN ++R G + AL Y+KM GV D
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSA---WNWMIRGFTMMGQFNYALLFYLKMLGAGVSPD 57
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
+TFP V++AC + S + G+IVH V MG + +V + + LI +YA+ G +SD+
Sbjct: 58 KYTFPYVVKACCGLKSVKM----GKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQ 113
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
LFD + K+ + WN+M +G+ N D A+++F M ++PN VT+
Sbjct: 114 YLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTF----------- 162
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
A VLSVCA A +G +HG + G E V N
Sbjct: 163 ------------------------ACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVAN 198
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
L+ +Y K ++ A+ LF + + ++VSWN +I+ Y + GL EA
Sbjct: 199 TLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEH------------ 246
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
LFR M A + +S+T + L E +L
Sbjct: 247 ---------------------------LFRGMISAGIKPDSITFASFLPCVNELLSLKHC 279
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
+EIHG+++R ++ ++ +++ L+++Y KC +E Q D + +MISGY +N
Sbjct: 280 KEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLN 339
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G + AL F +++ KP V F ++ A + +N G+ + +++ +++ +
Sbjct: 340 GKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKT-KLDEKCHV 398
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
+ ++D+ + G L A + N E +A W +++ SC
Sbjct: 399 GSAILDMYAKCGRLDLACRVF-NRITEKDAICWNSMITSC 437
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 177/378 (46%), Gaps = 56/378 (14%)
Query: 29 SLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
S L C + LL ++ K++H +I FL + ++ IY F R+V
Sbjct: 265 SFLPCVNELL----SLKHCKEIHGYIIRHAVVLDVFLKSALIDIY------FKCRDVEMA 314
Query: 89 APFDCKSSS---LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
C+SSS ++ +++ V NG + AL+ + + + + TF + A +
Sbjct: 315 QKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGL 374
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
+ + G+ +H +++ H+ + ++ MYAK G++ + ++F+++ K+ I W
Sbjct: 375 AAL----NLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICW 430
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
N M + + N A+ LF++M +EG + V+
Sbjct: 431 NSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVS-------------------------- 464
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
I+ LS CA+L A H GK IHG +IKG ++ +++LI +Y K G++
Sbjct: 465 ---------ISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNF 515
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
++ +F ++EKN VSWN++I++Y G E + +F ++ L G +P+ +++ +I
Sbjct: 516 SRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEM--LRNGI--QPDHVTFLGIIS 571
Query: 386 AFASNGRGEEALDLFRKM 403
A G+ +E + + M
Sbjct: 572 ACGHAGQVDEGIRYYHLM 589
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY++ G L++ +F ++ WN MI G+ M G AL + +M+ AG PD
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
F V+ AC V G+ + + V ++ + + ++ L G L +A + N+
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHE-TVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
P + ++ +W +LN KN D A+
Sbjct: 120 P-QKDSVLWNVMLNG--YVKNGDSGNAI 144
>gi|359474320|ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
Length = 580
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 195/620 (31%), Positives = 327/620 (52%), Gaps = 63/620 (10%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
++ Q KQVH +++ G + + AR + I A A+ V S W
Sbjct: 16 SVKQAKQVHALILIHGLSHLEPILARQILISASNYSATVAQYVHSVLHHSKSPDSFSWAC 75
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI-VHNH 161
+R + +G ++ A LYV+M++ G+ F ++AC R + G I +H
Sbjct: 76 AIRFSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKACA-----RIAYRMGGISIHGQ 130
Query: 162 VLQMGFQ---GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
V + GF +++ L+ Y K+G M + K+FD++ +N +SWN M +G+ +
Sbjct: 131 VQKFGFSCGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKS--- 187
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
G L + +R+ E + + ++W S++S +AR G +E+ LF M +R
Sbjct: 188 -GDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKASSLFQQMPERN----------- 235
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
F + NA+I + + GD+ A++ F + +KN
Sbjct: 236 ------------------------FASW----NAMISGHVEFGDIDSARSFFDAMPQKNN 267
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
VSW +I+ Y++ G D A E+F Q+ GG +++ ++A+I +A N R EAL+
Sbjct: 268 VSWMTMISGYSKCGDVDSACELFDQV----GGK----DLLLFNAMIACYAQNSRPNEALN 319
Query: 399 LFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
LF M V + +T++ ++S C++ L G I ++ R+ + + + LL++
Sbjct: 320 LFNNMLNPYVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDL 379
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCG +++ + +F + KKDL+ + +MI G G+NG +A+ F+EM++A P+ + F
Sbjct: 380 YAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITF 439
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
+ +L+A +HAGLV EG R F M +++ + P ++HY MVDL GRAG LQEA +++K+MP
Sbjct: 440 IGLLTAYNHAGLVEEGYRCFTSM-KKYNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMP 498
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAK 636
M+P+A VWG LL +CR+H N + E A F L +TTG LLSNIYA+ RW+D +
Sbjct: 499 MQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYRSLLSNIYASGERWDDVKR 558
Query: 637 VRISAKTKGLKKVAGQSWIE 656
+R K KG K+ G SW+E
Sbjct: 559 LRKVTKEKGFSKIPGCSWME 578
>gi|326509061|dbj|BAJ86923.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 866
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 204/703 (29%), Positives = 339/703 (48%), Gaps = 56/703 (7%)
Query: 48 KQVHNQLIVTG-ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
Q+H+ + G A +A + + R GR R + D ++LWN + +
Sbjct: 93 PQLHSLAVRAGHATREPHVACALADLLERLGRGASGRRLLAEGDGDDWKDAVLWNKQVAM 152
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
G ++ A+ + +MR GV DG+ + AC G R G+ VH H L++G
Sbjct: 153 LAEAGDWDGAIAAFREMRARGVAADGYACARALHACGRAG----RRLEGRAVHAHALRVG 208
Query: 167 F-QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
+ + L GMYA+ ++ + + + ++WN + + D ALEL
Sbjct: 209 LVDAHPLVPGFLAGMYAEGADVAAATTVLLRTAGAGVVAWNAVIACCVRLGLVDDALELA 268
Query: 226 KRMEL-----EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
+RM E EP TW ++LS AR GR E + + M ++GI A ++ +L
Sbjct: 269 ERMARDAETSEAAEPTLATWNTVLSGCARHGRDREALAVVRRMLEQGILPDAATVSSLLK 328
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
A+ + G +H F ++ G + AL+ +Y K G + +AQ +F +E +N+ +
Sbjct: 329 SVANSGSLGHGTEVHCFFLRHGLSPDAYTGTALVDMYAKCGRLDIAQRVFDGLEHRNLAT 388
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEK--LDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
WN+L+ +A AG D A+E+ +++ +D PNV +W+ +I +A NG +A+
Sbjct: 389 WNSLVAGHANAGHFDRALELVEAMKRHRID------PNVTTWNGLITGYAMNGLSSQAML 442
Query: 399 LFRKMQLAKVVANSVT----ISG-------------------------------LLSVCA 423
L R+++ A V N V+ ISG LL CA
Sbjct: 443 LLRQIKSAGVAPNVVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACA 502
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
A L G+E+H +R + + ++V L++MY K G L VF +++ K+L+ N+
Sbjct: 503 GLALLTKGKELHCFALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQGKNLVCCNA 562
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
M++G ++G A A F +M +G KPDG+ F A+L+AC GLV E D M ++
Sbjct: 563 MLTGLAVHGQAHEAAALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKY 622
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+ P EH+ACMVDLL R G L EA ++ P EP A WG LL C +H N D+AE+
Sbjct: 623 GVAPTAEHHACMVDLLARRGYLDEAMTFIERSPAEPGASSWGALLTGCAIHGNLDLAESA 682
Query: 604 ASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHM 663
A +F L + +Y+ + ++Y +++A ++ + K +G+ G SW + R IH+
Sbjct: 683 ARHLFKLEPHNSANYLAMMSLYEQHQMFDEAESLKYAMKARGVDARPGWSWTQAGRSIHV 742
Query: 664 F--SSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
F G+S + + + + L QM G VPD I +++
Sbjct: 743 FEVDGGSSPHPETPEIYDEMSRLVSQMRMVGYVPDTGCIAYDV 785
Score = 47.4 bits (111), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 113/275 (41%), Gaps = 32/275 (11%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LL+ C + L K++H + + ++ ++ +YA+ G L A+ VF
Sbjct: 497 LLRACAGLALLTKGKELHCFALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQ--- 553
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + N++L +G A L+ M + G+ DG TF ++ AC+ MG +
Sbjct: 554 GKNLVCCNAMLTGLAVHGQAHEAAALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWE 613
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGF 212
+ + + + G ++ + A+ G + ++ ++ + SW + +G
Sbjct: 614 Y---LDDMEAKYGVAPTAEHHACMVDLLARRGYLDEAMTFIERSPAEPGASSWGALLTGC 670
Query: 213 ALNFDCD----GALELFKRMELEGLEP-NFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
A++ + D A LFK LEP N + +++S + + +E L M+ RG
Sbjct: 671 AIHGNLDLAESAARHLFK------LEPHNSANYLAMMSLYEQHQMFDEAESLKYAMKARG 724
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
++ + G+ IH F + GG
Sbjct: 725 VDAR-----------PGWSWTQAGRSIHVFEVDGG 748
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 206/691 (29%), Positives = 351/691 (50%), Gaps = 44/691 (6%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F LL T+ QL Q+ QLI+ G + ++ + G + R +F
Sbjct: 17 FLTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKV---S 73
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL-GDGFTFPLVIRACKFMGSFRFRF 152
K L+N ++R NGL ++++ LY +RK L D FT+ I A + R
Sbjct: 74 KPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERV-- 131
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G ++H H + G N+ + + ++ +Y K + + K+FD + ++ + WN M SGF
Sbjct: 132 --GVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGF 189
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
+ N + ++ +F M GL + T ++L++ A M + + K+G+
Sbjct: 190 SRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDV 249
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ ++S+ + G+++ + + Y NA+I Y + + + A LF E
Sbjct: 250 YVLTGLISLYSKCGKSCKGRILFDQIDQPDLISY----NAMISGYTFNHETESAVTLFRE 305
Query: 333 I----EEKNIVSWNALITSYA----------------------EAGLCDEAVEVFSQLEK 366
+ + N + LI Y + + V+ +L +
Sbjct: 306 LLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNE 365
Query: 367 LDGGSM---ERP--NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
+ E P ++ SW+A+I + NG + A+ LF++M + ++ N VT++ +LS
Sbjct: 366 VQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSA 424
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
CA+ AL+IG+ +HG + + N+ V L++MY KCG + E +F+ + K+++TW
Sbjct: 425 CAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTW 484
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
N+MI+GYG++G G+ AL F EM+++G P GV F+++L ACSH+GLV+EG IF M
Sbjct: 485 NAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMAN 544
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
+ +P EHYACMVD+LGRAG L A + ++ MP+EP VWG LL +C +HKNT++A
Sbjct: 545 NYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMAN 604
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI 661
+ ++F L E G Y+LLSNIY+ + AA VR K + L K G + IE+ +
Sbjct: 605 VASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQ 664
Query: 662 HMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
++F+SG+ + E+LE+L +M G
Sbjct: 665 YVFTSGDRSHPQATAIFEMLEKLTGKMREAG 695
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 216/643 (33%), Positives = 336/643 (52%), Gaps = 66/643 (10%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS+YAR G + DA+ +F ++ + WN+++ + V G E A+++ M LGV
Sbjct: 198 LLSMYARLGLVDDAQRLFFSSGAGV-GDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGV 256
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG-FQGNVHIVNELIGMYAKMGQM 187
DG TF + AC + G+ VH VL+ N + + L+ MYA Q+
Sbjct: 257 RPDGVTFASALPACSRLE----LLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQV 312
Query: 188 SDSFKLFDKV--RVKNYISWNMMFSGFALNFDCDG-ALELFKRMELE-GLEPNFVTWTSL 243
S + ++FD V + WN M G+A + D A+ELF RME E G P+ T +
Sbjct: 313 SHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGV 372
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
L + C R E + G EA+ HG+V+K
Sbjct: 373 LPA---CARSE-------------VFTGKEAV-------------------HGYVVKRDM 397
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
FV+NAL+ +Y + G + A +F+ I+ ++IVSWN LIT GL EA ++ +
Sbjct: 398 ASNRFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVRE 457
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
++ + SA G G + ++D R M N++T+ LL CA
Sbjct: 458 MQ------------LPSSAASGETMLEG-DDTSVDGQRCMP------NNITLMTLLPGCA 498
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
AA G+EIHG+ VR ++ ++ V + L++MY KCGCL VF+++ ++++ITWN
Sbjct: 499 VLAAPARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNV 558
Query: 484 MISGYGMNGLGENALATFEEMIEAG-FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
+I YGM+GLG+ ALA F+ M+ G P+ V F+A L+ACSH+GLV+ G +F M R+
Sbjct: 559 LIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRD 618
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM-PMEPNAYVWGTLLNSCRMHKNTDVAE 601
+ EP +AC+VD+LGRAG L EA I+ +M P E W T+L +CR+H+N +
Sbjct: 619 YGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGR 678
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI 661
A ++F L + Y+LL NIY+A+G WE++ +VR + +G+ K G SWIE+ I
Sbjct: 679 IAAERLFELEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAI 738
Query: 662 HMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
H F +G S + V ++ L +M +G VPD +L ++
Sbjct: 739 HRFMAGESAHPESAQVHAHMDALWERMRREGYVPDTSCVLHDV 781
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 146/593 (24%), Positives = 246/593 (41%), Gaps = 116/593 (19%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+L+ YAR G L A +F P D + + + +NS++ + +AL M
Sbjct: 91 LLTAYARCGDLDAALALFAATPPDLRDA-VSYNSLISALCLFRRWGHALDALRDM----- 144
Query: 129 LGD----GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF--QGNVHI-VNELIGMY 181
L D FT V+ AC + R G+ H L+ GF +G N L+ MY
Sbjct: 145 LADHEVSSFTLVSVLLACSHLADQGHRL--GREAHAFALKHGFLDKGRERFPFNALLSMY 202
Query: 182 AKMGQMSDSFKLF--DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
A++G + D+ +LF V + ++WN M S C+ A+++ M G+ P+ VT
Sbjct: 203 ARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVT 262
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
+ S L + C RLE +L V G+ +H FV+
Sbjct: 263 FASALPA---CSRLE-----------------------LLGV---------GREVHAFVL 287
Query: 300 K-GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE--KNIVSWNALITSYAE-AGLCD 355
K FV +AL+ +Y + V A+ +F + E + + WNA+I YA+ G+ +
Sbjct: 288 KDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDE 347
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
EA+E+FS++E G + T+
Sbjct: 348 EAIELFSRMEAEAG--------------------------------------CAPSETTM 369
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
+G+L CA S +HG+VV+ M N VQN L++MY + G ++E H +F I+
Sbjct: 370 AGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYARLGRMDEAHTIFAMIDL 429
Query: 476 KDLITWNSMISGYGMNGLGENAL------------ATFEEMIEAGFK--------PDGVA 515
+D+++WN++I+G + GL A A+ E M+E P+ +
Sbjct: 430 RDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNIT 489
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
+ +L C+ G+ I VR +E + + +VD+ + G L A + +
Sbjct: 490 LMTLLPGCAVLAAPARGKEIHGYAVRH-ALESDLAVGSALVDMYAKCGCLALARAVFDRL 548
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
P N W L+ + MH D A A+ ++ T ++ + A S
Sbjct: 549 PRR-NVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFIAALAACS 600
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 172/348 (49%), Gaps = 29/348 (8%)
Query: 61 ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS-ILRVNVSNGLYENALKL 119
A++F+A+ ++ +YA ++ AR VF+ P + + WN+ I G+ E A++L
Sbjct: 294 ANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGM-WNAMICGYAQHGGMDEEAIEL 352
Query: 120 YVKMR-KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
+ +M + G T V+ AC F + + VH +V++ N + N L+
Sbjct: 353 FSRMEAEAGCAPSETTMAGVLPACARSEVFTGK----EAVHGYVVKRDMASNRFVQNALM 408
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
MYA++G+M ++ +F + +++ +SWN + +G + A +L + M+
Sbjct: 409 DMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQ--------- 459
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV--VLSVCADLAADHMGKVIHG 296
L S A G ETM D G I + +L CA LAA GK IHG
Sbjct: 460 -----LPSSAASG---ETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHG 511
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
+ ++ E + V +AL+ +Y K G + +A+ +F + +N+++WN LI +Y GL DE
Sbjct: 512 YAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDE 571
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
A+ +F +++ PN +++ A + A + +G + L+LF+ M+
Sbjct: 572 ALALF---DRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMK 616
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 204/491 (41%), Gaps = 69/491 (14%)
Query: 236 NFVTWTSLLSSHARCGRLEETMD-LFDMMRKRGIEVGAEAIAVVLSVCADLA--ADHMGK 292
+ V++ SL+S+ R +D L DM+ EV + + VL C+ LA +G+
Sbjct: 117 DAVSYNSLISALCLFRRWGHALDALRDMLADH--EVSSFTLVSVLLACSHLADQGHRLGR 174
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
H F +K GF D + + +NAL++ YA G
Sbjct: 175 EAHAFALKHGFLD----------------------------KGRERFPFNALLSMYARLG 206
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
L D+A +F G ++++W+ +I GR EEA+ + M V +
Sbjct: 207 LVDDAQRLFFSSGAGVG------DLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDG 260
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVR-VSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
VT + L C+ L +GRE+H V++ + N V + L++MY + VF+
Sbjct: 261 VTFASALPACSRLELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFD 320
Query: 472 QIEK--KDLITWNSMISGYGMN-GLGENALATFEEM-IEAGFKPDGVAFVAVLSACSHAG 527
+ + + L WN+MI GY + G+ E A+ F M EAG P VL AC+ +
Sbjct: 321 MVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSE 380
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
+ + +V+ + A M D+ R G + EA I + + + W TL
Sbjct: 381 VFTGKEAVHGYVVKRDMASNRFVQNALM-DMYARLGRMDEAHTIFAMIDLR-DIVSWNTL 438
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITE-------TTGSYMLLSNIYAASGRWEDAAKVRIS 640
+ C + + + S+ F L+ E +G ML + + G+ + +
Sbjct: 439 ITGC-------IVQGLISEAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLM 491
Query: 641 AKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE------LALQMENKGCV 694
G +A + ++IH ++ ++L+SDL +++ LAL +
Sbjct: 492 TLLPGCAVLAAPA---RGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRL 548
Query: 695 PDNDIILWEMM 705
P ++I W ++
Sbjct: 549 PRRNVITWNVL 559
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
NAL+T+YA G D A+ +F+ + + +S++++I A R ALD R
Sbjct: 89 NALLTAYARCGDLDAALALFAATPP------DLRDAVSYNSLISALCLFRRWGHALDALR 142
Query: 402 KMQLAKVVANSVTISGLLSVCAESA--ALNIGREIHGHVVR---VSMNKNILVQNGLLNM 456
M LA +S T+ +L C+ A +GRE H ++ + + N LL+M
Sbjct: 143 DM-LADHEVSSFTLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSM 201
Query: 457 YMKCGCLEEGHLVF--EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
Y + G +++ +F DL+TWN+MIS G E A+ +M+ G +PDGV
Sbjct: 202 YARLGLVDDAQRLFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGV 261
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVRE 542
F + L ACS L+ GR + ++++
Sbjct: 262 TFASALPACSRLELLGVGREVHAFVLKD 289
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 100/229 (43%), Gaps = 20/229 (8%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K++H + + + + ++ +YA+ G L AR VF+ P + + + WN ++
Sbjct: 507 KEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLP---RRNVITWNVLIMAY 563
Query: 108 VSNGLYENALKLYVKMRKLG-VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
+GL + AL L+ +M G + TF + AC G Q + G
Sbjct: 564 GMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKR---DYG 620
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY--ISWNMMFSGFALNFDCD----G 220
F+ ++ ++ + + G++ +++ + + + +W+ M L+ +
Sbjct: 621 FEPTPYLHACVVDVLGRAGRLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIA 680
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGI 268
A LF+ LEP+ + LL + ++ G E + ++ MMR+RG+
Sbjct: 681 AERLFE------LEPDEASHYVLLCNIYSAAGLWENSTEVRGMMRQRGV 723
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 190/584 (32%), Positives = 299/584 (51%), Gaps = 94/584 (16%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW--NMMFSGFALN 215
+H VL+ G N L+ YA + + S ++FD +R + ++ N M +AL
Sbjct: 371 LHAQVLKQGLHLNPRAAARLVSAYALLRLLPSSRRVFDAIRDPHADAFLANTMLRAYALG 430
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
AL F M + T++ L+ + + A +
Sbjct: 431 GAPRDALAAFSAMPRR----DSFTYSFLIKA-----------------------LSAAGV 463
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG-------------- 321
A V + +H V+K G + FV NALI Y K+G
Sbjct: 464 APV-------------RAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPE 510
Query: 322 -----------------DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
++ A+ LF E+ EK+ VSWN ++ Y +AG + A E+F +
Sbjct: 511 RDVVSWNTAMAAMVREGELAGARKLFDEMPEKDTVSWNTILDGYTKAGEVEAAFELFQR- 569
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM------------QLAKVVANS 412
M NV+SWS ++ + G E A +F KM + A V +
Sbjct: 570 -------MPERNVVSWSTMVSGYCKKGDLEMARVIFDKMPGKNLVTWTIMMKEASVELDV 622
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE- 471
+ +L+ CAES +L++G+ IH +V + ++ ++ V N L++M+ KCGC+ VF+
Sbjct: 623 AAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDT 682
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
+ +KD ++WNS+I G+ M+G G+ AL F +M + GF PD V + VLSAC+H G V+E
Sbjct: 683 ETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDE 742
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
GRR F M R++ I PQ+EHY CM+DLLGR GL++EA D++K+MP EPN +WG+LL++C
Sbjct: 743 GRRYFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSAC 802
Query: 592 RMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
R+HKN + AE +++ L G+Y +LSNIYA +G+W D AK R+ K G +K AG
Sbjct: 803 RLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAG 862
Query: 652 QSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
SW+E+ H F+ G+ D + E+++ L+ +++ GCVP
Sbjct: 863 SSWVELNETFHEFTVGDRKHQDSDQISEMVDRLSSHVKHVGCVP 906
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 206/453 (45%), Gaps = 93/453 (20%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
++++H Q++ G + + AAR++S YA L +R VF+ A D + + L N++LR
Sbjct: 367 HVRELHAQVLKQGLHLNPRAAARLVSAYALLRLLPSSRRVFD-AIRDPHADAFLANTMLR 425
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
G +AL + M + D FT+ +I+A G R VH+HV+++
Sbjct: 426 AYALGGAPRDALAAFSAMPRR----DSFTYSFLIKALSAAGVAPVR-----AVHSHVVKL 476
Query: 166 GFQGNVHIVNELIGMYAKMGQMSD-------------------------------SFKLF 194
G + + N LI Y+K G SD + KLF
Sbjct: 477 GSVEDTFVGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGARKLF 536
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
D++ K+ +SWN + G+ + + A ELF+RM E N V+W++++S + + G LE
Sbjct: 537 DEMPEKDTVSWNTILDGYTKAGEVEAAFELFQRMP----ERNVVSWSTMVSGYCKKGDLE 592
Query: 255 ETMDLFD------------MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
+FD MM++ +E+ A+ +L+ CA+ + +GK IH +V K
Sbjct: 593 MARVIFDKMPGKNLVTWTIMMKEASVELDVAAVVSILAACAESGSLSLGKRIHRYVRKRN 652
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLF-SEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
V NALI ++ K G V A +F +E +K+ VSWN++I +A G D+A+E+F
Sbjct: 653 LGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDKALELF 712
Query: 362 SQLEK----------------------LDGG-----SMER-----PNVISWSAVIGAFAS 389
+Q+++ +D G +MER P + + +I
Sbjct: 713 AQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHYGCMIDLLGR 772
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
G +EA+DL + M N V LLS C
Sbjct: 773 GGLIKEAVDLIKSMPWEP---NEVIWGSLLSAC 802
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 202/663 (30%), Positives = 334/663 (50%), Gaps = 88/663 (13%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + L +++H +I G + + ++++Y + G + AR VF+ P
Sbjct: 210 FPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMP 269
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ WN+++ NG+ L+L+ M K V D T VI AC+ +G R
Sbjct: 270 ---NRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRL 326
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H +VL+ F + I N LI MY+ +G + ++ +F + ++
Sbjct: 327 ----GRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRD--------- 373
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
V+WT+++S + C ++ ++ + MM GI
Sbjct: 374 --------------------------LVSWTAMISGYENCLMPQKALETYKMMEAEGIMP 407
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
IA+VLS C+ L MG +H + G Y V N+L
Sbjct: 408 DEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSL----------------- 450
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVF-SQLEKLDGGSMERPNVISWSAVIGAFAS 389
I YA+ D+A+E+F S LEK N++SW+++I
Sbjct: 451 --------------IDMYAKCKCIDKALEIFHSTLEK---------NIVSWTSIILGLRI 487
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
N R EAL FR+M + ++ NSVT+ +LS CA AL G+EIH H +R ++ + +
Sbjct: 488 NNRCFEALFFFREM-IRRLKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFM 546
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
N +L+MY++CG +E F ++ ++ +WN +++GY G G +A F+ M+E+
Sbjct: 547 PNAILDMYVRCGRMEYAWKQFFSVDH-EVTSWNILLTGYAERGKGAHATELFQRMVESNV 605
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
P+ V F+++L ACS +G+V EG F+ M ++ I P ++HYAC+VDLLGR+G L+EA
Sbjct: 606 SPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAY 665
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASG 629
+ ++ MPM+P+ VWG LLNSCR+H + ++ E A IF T + G Y+LLSN+YA +G
Sbjct: 666 EFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNG 725
Query: 630 RWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
+W+ A+VR + GL G SW+EVK +H F S ++ +K + +LE +M+
Sbjct: 726 KWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMK 785
Query: 690 NKG 692
G
Sbjct: 786 EAG 788
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 146/513 (28%), Positives = 245/513 (47%), Gaps = 85/513 (16%)
Query: 32 DCFDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
D + L++ C+ K+ V++ + ++ ++ S L +LS++ RFG L DA VF
Sbjct: 107 DAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGR 166
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
K + WN ++ GL++ AL LY +M +GV D +TFP V+R C M +
Sbjct: 167 ME---KRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNL 223
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
G+ +H HV++ GF+ +V +VN LI MY K G ++ + +FDK+ ++ ISWN M
Sbjct: 224 ----VRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAM 279
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
SG+ N C LEGL LF MM K +
Sbjct: 280 ISGYFENGVC-----------LEGLR------------------------LFGMMIKYPV 304
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
+ + V++ C L D +G+ IHG+V++ F G+ +
Sbjct: 305 DPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEF--------------GRDPSIH---- 346
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
N+LI Y+ GL +EA VFS+ E D ++SW+A+I +
Sbjct: 347 -------------NSLIPMYSSVGLIEEAETVFSRTECRD--------LVSWTAMISGYE 385
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
+ ++AL+ ++ M+ ++ + +TI+ +LS C+ L++G +H + + +
Sbjct: 386 NCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSI 445
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
V N L++MY KC C+++ +F +K++++W S+I G +N AL F EMI
Sbjct: 446 VANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR- 504
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
KP+ V V VLSAC+ G + G+ I +R
Sbjct: 505 LKPNSVTLVCVLSACARIGALTCGKEIHAHALR 537
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/491 (25%), Positives = 225/491 (45%), Gaps = 96/491 (19%)
Query: 111 GLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR---FRFSFGQIVHNHV-LQMG 166
G + A+ M +L + + + +IR C++ + + +S+ I +H+ LQ+G
Sbjct: 85 GNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLG 144
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
N L+ M+ + G + D++ +F ++ +N SWN++ G+A D AL+L+
Sbjct: 145 --------NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYH 196
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
RM G++P+ T+ +L + CG + +++R
Sbjct: 197 RMLWVGVKPDVYTFPCVLRT---CGGMP------NLVR---------------------- 225
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
G+ IH VI+ GFE V V NALI +Y K GDV A+ +F ++ ++ +SWNA+I+
Sbjct: 226 ----GREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMIS 281
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
Y E G+C E + +F + K
Sbjct: 282 GYFENGVCLEGLRLFGMMIKY--------------------------------------- 302
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
V + +T++ +++ C +GR+IHG+V+R ++ + N L+ MY G +EE
Sbjct: 303 PVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEA 362
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
VF + E +DL++W +MISGY + + AL T++ M G PD + VLSACS
Sbjct: 363 ETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCL 422
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYA----CMVDLLGRAGLLQEASDIVKNMPMEPNAY 582
++ G M + E + + Y+ ++D+ + + +A +I + +E N
Sbjct: 423 CNLDMG-----MNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHST-LEKNIV 476
Query: 583 VWGTLLNSCRM 593
W +++ R+
Sbjct: 477 SWTSIILGLRI 487
>gi|357446017|ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 622
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 199/612 (32%), Positives = 320/612 (52%), Gaps = 83/612 (13%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
Q+H +TG+ ++ ++S+YA+F + AR VF+T P ++ WNS++ +
Sbjct: 87 QLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMP---HRDTITWNSMINAYL 143
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG-- 166
NGL AL++ LG L ++ C +R G+ +H V+ G
Sbjct: 144 QNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWRI--GRQIHGLVVVDGRI 201
Query: 167 -FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
Q +V + + Y + G + +FD++ VKN +SW + SG A N D D AL +
Sbjct: 202 RIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACY 261
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
+ M++EG+ PN VT +LL++ AR G ++
Sbjct: 262 REMQVEGVSPNRVTLIALLAACARPGFVK------------------------------- 290
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD-VKVAQNLFSEIEEKNIVSWNAL 344
GK IHG+ + GF+ ALI +Y + G + +A+ +F
Sbjct: 291 ----YGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIF-------------- 332
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+G S+ +V+ WS++IG++A G ++AL LF KM+
Sbjct: 333 -----------------------EGSSLR--DVVLWSSIIGSYARRGESDKALKLFNKMR 367
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
+ N VT+ ++S C ++ G IHG++++ + +I V N L+NMY KCG L+
Sbjct: 368 TEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLD 427
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
+ +F ++ +D +TWNSMIS YG++G GE AL F EM E G K D V F+AVLSAC+
Sbjct: 428 DSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACN 487
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
HAGLV EG+++F+ + + I +EHYAC++DL GR+G L++A +I++ MPM+P+A +W
Sbjct: 488 HAGLVTEGQQLFEQVNADCEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIW 547
Query: 585 GTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTK 644
+L++SC++H D+AE+++SQ+ SY LLS I+A GRW D +VR + K +
Sbjct: 548 SSLVSSCKLHGRLDIAESLSSQLIRSEPNNAASYTLLSMIHAEKGRWLDIEQVRETMKLQ 607
Query: 645 GLKKVAGQSWIE 656
L+K G S IE
Sbjct: 608 RLRKCYGFSRIE 619
Score = 139 bits (350), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 208/497 (41%), Gaps = 84/497 (16%)
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDG--FTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
++ VS GLY L+ + ++ + F P VI+AC SF +FG +H
Sbjct: 36 IKTLVSMGLYHQTLQFFTQLHFSAHHFNSIPFVLPSVIKAC----SFTHFHAFGTQLHCL 91
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
G + + N +I MYAK + + ++FD + ++ I+WN M + + N A
Sbjct: 92 AFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEA 151
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
L++ K G P S++S CGR MDL
Sbjct: 152 LQMLKDFYFLGFLPKPELLASMVS---MCGR---EMDL---------------------- 183
Query: 282 CADLAADHMGKVIHGFVIKGG---FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
+G+ IHG V+ G + VF+ A + Y + GD +A+++F E+E KN
Sbjct: 184 -----GWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNE 238
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
VSW A+I+ A D A+ + ++
Sbjct: 239 VSWTAVISGCANNQDYDVALACYREM---------------------------------- 264
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
Q+ V N VT+ LL+ CA + G+EIHG+ R + L+ +Y
Sbjct: 265 -----QVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYC 319
Query: 459 KCG-CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
+CG L +FE +D++ W+S+I Y G + AL F +M +P+ V +
Sbjct: 320 ECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLL 379
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
AV+SAC++ G I +++ F I + ++++ + G L ++ I MP
Sbjct: 380 AVISACTNLSSFKHGGVIHGYILK-FGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPS 438
Query: 578 EPNAYVWGTLLNSCRMH 594
++ W +++++ +H
Sbjct: 439 R-DSVTWNSMISAYGLH 454
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 150/312 (48%), Gaps = 19/312 (6%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGR-LFDARNVFETAPFDCKSSSLLWNSILRV 106
K++H G ++ + ++ +Y G+ L A +FE + +LW+SI+
Sbjct: 293 KEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSL---RDVVLWSSIIGS 349
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
G + ALKL+ KMR + T VI AC + SF+ G ++H ++L+ G
Sbjct: 350 YARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKH----GGVIHGYILKFG 405
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
++ + N LI MYAK G + DS K+F ++ ++ ++WN M S + L+ + AL+ F
Sbjct: 406 IGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQALQHFY 465
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCADL 285
M+ G++ + VT+ ++LS+ G + E LF+ + I + E A ++ DL
Sbjct: 466 EMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPITIEHYACLI----DL 521
Query: 286 AADHMGKVIHGFVI--KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI---EEKNIVS 340
GK+ I + + ++L+ HG + +A++L S++ E N S
Sbjct: 522 HG-RSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSSQLIRSEPNNAAS 580
Query: 341 WNALITSYAEAG 352
+ L +AE G
Sbjct: 581 YTLLSMIHAEKG 592
>gi|297736926|emb|CBI26127.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 194/621 (31%), Positives = 324/621 (52%), Gaps = 45/621 (7%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
A+ GR+ AR +F+ P ++ WN++L GL++ AL L+ MR D F
Sbjct: 16 AKLGRITSARRLFDEMP---HKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDRF 72
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
TF + AC +G R G +H V+ G Q ++ + N LI MY K + + ++
Sbjct: 73 TFTATLSACAGLGELRR----GMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRV 128
Query: 194 FDKVRVKNYISW-NMMFSGFALNFDCDGALELFKRMELEGLEPNF-VTWTSLLSSHARCG 251
F+++ + N +SW +++F+ + G ++ R+ +G+ + W ++S + +CG
Sbjct: 129 FEEMSIMNEVSWCSLLFA-----YTSSGLFDV-ARVVFDGMPKKVEIAWNIMISGYGQCG 182
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
+E + LF MR+ ++ + +++ +L G ++HGF+IK G++D +
Sbjct: 183 DVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVM---- 238
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
+F I VSWNA+I ++ + G EA VF QL
Sbjct: 239 ----------------KVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVF-QLAP----- 276
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
NV+SW+++I +A NG GE+AL F KM + + T +L C+ A L G
Sbjct: 277 --EKNVVSWTSMITGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHG 334
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
+ IHG ++ + + V NGL+NMY KCG ++ + F++I KDL++WN+M+ G GM+
Sbjct: 335 KMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMH 394
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G AL +EEM+ +G KPD V F+ +L CSH+GL+ +G+ +F+ MV + + + EH
Sbjct: 395 GHATQALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEH 454
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNA--YVWGTLLNSCRMHKNTDVAEAMASQIFG 609
CMVDLLGR G L +A ++V A + LL +C H + + +
Sbjct: 455 VVCMVDLLGRGGYLAQARELVDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKV 514
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
+ SY+LLSN+Y SG+W++A VR + G+KK+ G SWIEV+ K+ +F +GN
Sbjct: 515 FEPQKEMSYVLLSNLYCVSGQWKEAEMVRKTMTDHGVKKMPGCSWIEVRNKVTVFVAGNH 574
Query: 670 LQSDLKNVCEVLEELALQMEN 690
++ +C++L L +M N
Sbjct: 575 SHPYMEELCKILNFLKFEMRN 595
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 110/231 (47%), Gaps = 32/231 (13%)
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
++F + I K G + A+ LF E+ K+ V+WNA++ SY++ GL +A+ +F
Sbjct: 2 HSHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHH 61
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
+ + RP+ +++A + A A G +L R M+ + V +SG S
Sbjct: 62 MRIAN----SRPDRFTFTATLSACAGLG------ELRRGMK----IHAQVVVSGCQS--- 104
Query: 424 ESAALNIGR---EIHGHVVRVSMNKNILVQNGLLN---------MYMKCGCLEEGHLVFE 471
+L +G +++G + + + + + ++N Y G + +VF+
Sbjct: 105 ---SLPVGNSLIDMYGKCLSATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFD 161
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
+ KK I WN MISGYG G E L F++M E +PD F A+++A
Sbjct: 162 GMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMREDSLQPDQWTFSALVNA 212
>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 192/656 (29%), Positives = 337/656 (51%), Gaps = 48/656 (7%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
QVH ++ TG ++ ++ Y G +++A+ +FE P + + W S++
Sbjct: 396 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP---DHNVVSWTSLMVGYS 452
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+G L +Y +MR+ GV G+ TF V +C + G V H++Q GF+
Sbjct: 453 DSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQ----VLGYQVLGHIIQYGFE 508
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+V + N LI M++ + ++ +FD + +CD
Sbjct: 509 DSVSVANSLISMFSSFSSVEEACYVFDHMN------------------ECD--------- 541
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
++W +++S++A G E++ F MR E + ++ +LSVC+ +
Sbjct: 542 --------IISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNL 593
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
G+ IHG V+K G + V + N L+ +Y + G + A+ +F + E++++SWN+++ Y
Sbjct: 594 KWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACY 653
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+ G C + +++ ++L + M +P+ ++W+A+IG A N EA+ ++ ++ +
Sbjct: 654 VQDGKCLDGLKILAELLQ-----MGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGI 708
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
AN +T+ L + A A L G+++HG V+++ ++ V N ++MY KCG + +
Sbjct: 709 PANYITMVSL-AATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLK 767
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
+ Q + ++WN +IS + +G + A TF EM++ G KPD V FV++LSAC+H GL
Sbjct: 768 MLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGL 827
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
V+EG +D M REF + P +EH C++DLLGR+G L A +K MP+ PN W +LL
Sbjct: 828 VDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLL 887
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
+CR+H N ++A A + L +Y+L SN+ A SG+WED +R + +KK
Sbjct: 888 AACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKK 947
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
SW+++K K+H F G + L EL + G VPD L +M
Sbjct: 948 QPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDM 1003
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 143/498 (28%), Positives = 238/498 (47%), Gaps = 87/498 (17%)
Query: 69 VLSIYAR--FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL 126
++S YA+ +G + AR VF+ ++S W+++L V GLYE A+ L+ +M L
Sbjct: 312 LISGYAKHGYGHMAHARYVFDEMRHRNEAS---WSTMLSGYVRVGLYEEAVGLFCQMWGL 368
Query: 127 GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ 186
GV +GF +I AC G + G VH V++ G G+V++ L+ Y +G
Sbjct: 369 GVEPNGFMVASLITACSRSG---YMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGL 425
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
+ ++ KLF+++ N +SW + G++ + + L +++RM EG+ N T+ ++ SS
Sbjct: 426 VYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSS 485
Query: 247 HARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY 306
CG LE+ + +G + G +I+ GFED
Sbjct: 486 ---CGLLEDQV--------------------------------LGYQVLGHIIQYGFEDS 510
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
V V N+LI ++ V+ A +F + E +I+SWNA+I++YA GLC E++ F +
Sbjct: 511 VSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRH 570
Query: 367 LDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
L + NS T+S LLSVC+
Sbjct: 571 LHNET---------------------------------------NSTTLSSLLSVCSSVD 591
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
L GR IHG VV++ ++ N+ + N LL +Y + G E+ LVF+ + ++DLI+WNSM++
Sbjct: 592 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 651
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
Y +G + L E+++ G KPD V + A++ + NE + + ++RE I
Sbjct: 652 CYVQDGKCLDGLKILAELLQMG-KPDRVTWNALIGGHAENEEPNEAVKAYK-LIREKGIP 709
Query: 547 PQMEHYACMVDLLGRAGL 564
Y MV L A L
Sbjct: 710 AN---YITMVSLAATANL 724
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 135/528 (25%), Positives = 228/528 (43%), Gaps = 83/528 (15%)
Query: 15 SNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA 74
SNP+R Y L C D K Q +H LI G + L +++ Y
Sbjct: 23 SNPTR-LDPSLYLKILQLCIDK-----KAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYV 76
Query: 75 RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFT 134
+ G + ARNVF+ P + S + W +++ NG +E A L+ MR GV
Sbjct: 77 KVGDVIAARNVFDGMP---ERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKA---- 129
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
NH L+ ++K G+M D+ LF
Sbjct: 130 -------------------------NHA--------------LVDFHSKCGKMEDASYLF 150
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
+ ++ +SWN M G+A+ D + +F+ M GL P+ T S+L + A G L
Sbjct: 151 GTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLI 210
Query: 255 ETMDLFDMMRK---------RGIEVGAEAIAVVLSVCADLAADHMGK-------VIHGFV 298
+ ++ + G+ + A A L DL + K +I G+
Sbjct: 211 IANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYA 270
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD--E 356
+G + + NALI +Y K G+++ A+ F E+EEKN++SW +LI+ YA+ G
Sbjct: 271 HEGIYT----MGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAH 326
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
A VF + M N SWS ++ + G EEA+ LF +M V N ++
Sbjct: 327 ARYVFDE--------MRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVA 378
Query: 417 GLLSVCAESAAL-NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
L++ C+ S + + G ++HG VV+ + ++ V L++ Y G + +FE++
Sbjct: 379 SLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPD 438
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
++++W S++ GY +G L ++ M + G + F V S+C
Sbjct: 439 HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC 486
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 187/452 (41%), Gaps = 111/452 (24%)
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
S + S GRL E + L R + +L +C D A G +IH +I
Sbjct: 3 SKIQSACNLGRLAEALKLLSSNPTR---LDPSLYLKILQLCIDKKAKKQGHLIHTHLITN 59
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
GF + + LI Y K GDV A+N+F + E+++VSW A+++ Y++ G ++A +F
Sbjct: 60 GFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLF 119
Query: 362 SQLEK------------------------LDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
S + L G MER +V+SW+A+IG +A G +++
Sbjct: 120 SDMRHCGVKANHALVDFHSKCGKMEDASYLFGTMMER-DVVSWNAMIGGYAVQGFADDSF 178
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ------- 450
+FR M +V + T+ +L AE L I +IHG + ++ +V
Sbjct: 179 CMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAY 238
Query: 451 ----------------------------------------NGLLNMYMKCGCLEEGHLVF 470
N L++MY K G +E+ F
Sbjct: 239 AKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAF 298
Query: 471 EQIEKKDLITWNSMISGYGMNGLG---------------------------------ENA 497
+++E+K++I+W S+ISGY +G G E A
Sbjct: 299 DEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEA 358
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAG-LVNEGRRIFDMMVREFRIEPQMEHYACMV 556
+ F +M G +P+G ++++ACS +G + +EG ++ +V+ I + +V
Sbjct: 359 VGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKT-GILGDVYVGTALV 417
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
G GL+ A + + MP + N W +L+
Sbjct: 418 HFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLM 448
>gi|326498517|dbj|BAJ98686.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 647
Score = 335 bits (860), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 205/655 (31%), Positives = 326/655 (49%), Gaps = 46/655 (7%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRL--FDARNVFETAPF 91
D L +C ++ L Q+H Q I +G A AF A+R+L ++ RL F + F
Sbjct: 7 LDAQLARCSSVRHLLQIHGQFIASGLLADAFAASRLL-LFTSATRLLPFPIHHSFRLLRL 65
Query: 92 DCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR 151
++ N++L+ + G+ L LY L D +T P++ AC + R
Sbjct: 66 VRCPNAFSCNTLLKAALLAGMPHLCLPLYTS---LPASPDTYTHPILAAAC----AARRD 118
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
S G+ V +H ++ GF ++++ N L+ MY+ G + D+ ++FD V + +SWN + +
Sbjct: 119 VSEGRQVQSHAIRHGFGDDLYLRNALMHMYSVCGCLWDARRVFDAGPVWDAVSWNTILAA 178
Query: 212 FALNFDCDGALELFKRM----------------------ELEGLEP-----NFVTWTSLL 244
+ D D A+ +F RM E G+ + TWT+++
Sbjct: 179 YVHAGDVDQAVGVFARMPKRNATAVSSMVSLFGRRGMVEEARGVFDEAECRDIFTWTAMI 238
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
S R E + +F MR+ V + V++ CA G++ HG VI+ G
Sbjct: 239 SCFERNDMFAEALHMFSCMRREMWPVDEALMVSVVAACAQSEVIRNGELCHGLVIRAGLC 298
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
+ ++N LI +Y DV A+ LF + + SWN++I Y + G + A+ +FS +
Sbjct: 299 SLLNIQNVLIHMYSCCLDVVAARRLFDSGDCLDQFSWNSMIAGYLKNGHVENAMTLFSAM 358
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
D +SWS +I N + AL +F M+ V + VTI ++S C
Sbjct: 359 PDKDN--------VSWSTMISGCVQNNQSSHALTVFDNMRAQGVRPDEVTIVSVISACTN 410
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
+AL G+ +H +V + +++ L++MYMKCG LE VF +E+K WN++
Sbjct: 411 LSALEKGKSVHDYVRQNKCYITLVLGTSLIDMYMKCGYLEAAMDVFNIMEEKGAPCWNAV 470
Query: 485 ISGYGMNGLGENALATFEEMIEAGFK-PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
I G MNGL +L F EM + P+ + F VLSAC HAGLV EGR F +M ++
Sbjct: 471 IVGLAMNGLVTKSLEIFSEMEASSTAIPNEITFTGVLSACRHAGLVEEGRHFFKLMQHKY 530
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+I P + HY CMVDLLGRAG ++EA D++++MPM P+ WG LL +C H +V E +
Sbjct: 531 QIVPNIRHYGCMVDLLGRAGYVKEAEDLIESMPMSPDVPAWGALLGACWKHGENEVGERV 590
Query: 604 ASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
++ L G +LSNIYA G W+ +R S K + + KV+G S +E+
Sbjct: 591 GRKLVNLDPRHDGFQTMLSNIYAKEGMWQSVNDLRDSMKQRHVPKVSGYSVVEMS 645
>gi|15228064|ref|NP_181235.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206293|sp|Q9SJK9.1|PP189_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g36980, mitochondrial; Flags: Precursor
gi|4883614|gb|AAD31583.1| hypothetical protein [Arabidopsis thaliana]
gi|330254236|gb|AEC09330.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 625
Score = 335 bits (860), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 193/635 (30%), Positives = 332/635 (52%), Gaps = 31/635 (4%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L +++ S+ A+ GR+ AR VF+ P + ++ WN++L GL++ A+ L+ ++R
Sbjct: 7 LTSKIASL-AKSGRIASARQVFDGMP---ELDTVAWNTMLTSYSRLGLHQEAIALFTQLR 62
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
D ++F ++ C +G+ +F G+ + + V++ GF ++ + N LI MY K
Sbjct: 63 FSDAKPDDYSFTAILSTCASLGNVKF----GRKIQSLVIRSGFCASLPVNNSLIDMYGKC 118
Query: 185 GQMSDSFKLFDKV--RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT--W 240
+ K+F + +N ++W + + + AL++F M P V W
Sbjct: 119 SDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEM------PKRVAFAW 172
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC-ADLAADHMGKVIHGFVI 299
++S HA CG+LE + LF M + + + +++ C AD + G+++H ++
Sbjct: 173 NIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVML 232
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
K G+ V KN+++ Y K G A IE VSWN++I + + G ++A+E
Sbjct: 233 KNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALE 292
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
VF + N+++W+ +I + NG GE+AL F +M + V ++ +L
Sbjct: 293 VFHLAPE--------KNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVL 344
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
C+ A L G+ IHG ++ V N L+N+Y KCG ++E F I KDL+
Sbjct: 345 HACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLV 404
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN+M+ +G++GL + AL ++ MI +G KPD V F+ +L+ CSH+GLV EG IF+ M
Sbjct: 405 SWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESM 464
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM----EPNAYVWGTLLNSCRMHK 595
V+++RI +++H CM+D+ GR G L EA D+ N W TLL +C H
Sbjct: 465 VKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHW 524
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
+T++ ++ + S++LLSN+Y ++GRW++ VR +G+KK G SWI
Sbjct: 525 HTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWI 584
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
EV ++ F G+S L+ + E L L +M N
Sbjct: 585 EVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMRN 619
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 193/433 (44%), Gaps = 83/433 (19%)
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRK-------------RGIEVGAEAIAV------ 277
V TS ++S A+ GR+ +FD M + + + EAIA+
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 278 ------------VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
+LS CA L G+ I VI+ GF + V N+LI +YGK D
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 326 AQNLFSEI--EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
A +F ++ + +N V+W +L+ +Y A + A++VF + M + +W+ +
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVE--------MPKRVAFAWNIM 175
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC-AESAALNIGREIHGHVVRVS 442
I A G+ E L LF++M ++ + T S L++ C A+S+ + GR +H +++
Sbjct: 176 ISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNG 235
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE---------------------------- 474
+ + +N +L+ Y K G ++ E IE
Sbjct: 236 WSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFH 295
Query: 475 ---KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
+K+++TW +MI+GYG NG GE AL F EM+++G D A+ AVL ACS L+
Sbjct: 296 LAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGH 355
Query: 532 GRRIFDMMVREFRIEPQMEHYA----CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
G+ M+ I + YA +V+L + G ++EA ++ + W T+
Sbjct: 356 GK-----MIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTM 409
Query: 588 LNSCRMHKNTDVA 600
L + +H D A
Sbjct: 410 LFAFGVHGLADQA 422
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 44/271 (16%)
Query: 32 DC--FDHLLQQCKT----IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR-- 83
DC F L+ C + + VH ++ G +++ VLS Y + G DA
Sbjct: 203 DCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRE 262
Query: 84 -----------------------------NVFETAPFDCKSSSLLWNSILRVNVSNGLYE 114
VF AP + + + W +++ NG E
Sbjct: 263 LESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAP---EKNIVTWTTMITGYGRNGDGE 319
Query: 115 NALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIV 174
AL+ +V+M K GV D F + V+ AC + G+++H ++ GFQG ++
Sbjct: 320 QALRFFVEMMKSGVDSDHFAYGAVLHACSGLA----LLGHGKMIHGCLIHCGFQGYAYVG 375
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N L+ +YAK G + ++ + F + K+ +SWN M F ++ D AL+L+ M G++
Sbjct: 376 NALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIK 435
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
P+ VT+ LL++ + G +EE +F+ M K
Sbjct: 436 PDNVTFIGLLTTCSHSGLVEEGCMIFESMVK 466
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL-WNSILRV 106
K +H LI G A++ ++++YA+ G + +A F D + L+ WN++L
Sbjct: 357 KMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFG----DIANKDLVSWNTMLFA 412
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR-FSFGQIVHNHVLQM 165
+GL + ALKLY M G+ D TF ++ C G F +V ++ + +
Sbjct: 413 FGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPL 472
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDK-----VRVKNYISWNMMFSGFALNFDCDG 220
V V +I M+ + G ++++ L N SW + + ++ +
Sbjct: 473 ----EVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTEL 528
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
E+ K +++ EP+ LLS+ + GR +E D+ M +RG++
Sbjct: 529 GREVSKVLKIA--EPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMK 576
>gi|12324033|gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Arabidopsis thaliana]
Length = 839
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 212/665 (31%), Positives = 355/665 (53%), Gaps = 52/665 (7%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
LQ+ + I +Q+ N+ IV+ ++A ++S YA G++ A VF+ P +S
Sbjct: 66 LQEAEAI--FRQMSNRSIVS------WIA--MISAYAENGKMSKAWQVFDEMPVRVTTS- 114
Query: 98 LLWNSILRVNVSNGL-YENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
+N+++ + N A +L+ + + + +RA RF +
Sbjct: 115 --YNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAG--------RFDEAE 164
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
++ + F+ +V N L+ Y + G+ +++ ++F + VK +S + M G+
Sbjct: 165 FLYAET-PVKFRDSV-ASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMG 222
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG-IEVGAEAI 275
A LF RM E N +TWT+++ + + G E+ LF MR+ G ++V + +
Sbjct: 223 RIVDARSLFDRMT----ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTL 278
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
AV+ C D G IHG V + E +F+ N+L+ +Y K G + A+ +F ++
Sbjct: 279 AVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN 338
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG-----------------------GSM 372
K+ VSWN+LIT + EA E+F ++ D G M
Sbjct: 339 KDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMM 398
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
+ I+W+A+I AF SNG EEAL F KM +V NS T S +LS A A L G
Sbjct: 399 PEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGL 458
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
+IHG VV++++ ++ VQN L++MY KCG + + +F I + +++++N+MISGY NG
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNG 518
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
G+ AL F + +G +P+GV F+A+LSAC H G V+ G + F M + IEP +HY
Sbjct: 519 FGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHY 578
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
ACMVDLLGR+GLL +AS+++ MP +P++ VWG+LL++ + H D+AE A ++ L
Sbjct: 579 ACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEP 638
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
++ Y++LS +Y+ G+ D ++ K+K +KK G SWI +K ++H F +G+ Q
Sbjct: 639 DSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQL 698
Query: 673 DLKNV 677
+L+ +
Sbjct: 699 NLEEI 703
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 166/415 (40%), Gaps = 88/415 (21%)
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
S +S HAR G L+E +F M R I ++ + + A M K F
Sbjct: 55 SQISKHARNGNLQEAEAIFRQMSNRSI------VSWIAMISAYAENGKMSKAWQVF---- 104
Query: 302 GFEDYVFVK-----NALICVYGKHG-DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
D + V+ NA+I K+ D+ A LF +I EKN VS+ +IT + AG D
Sbjct: 105 ---DEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFD 161
Query: 356 EAVEVFSQLE---------------KLDGGS----------MERPNVISWSAVIGAFASN 390
EA ++++ L G M V+S S+++ +
Sbjct: 162 EAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKM 221
Query: 391 GRGEEALDLFRKM--------------------------------QLAKVVANSVTISGL 418
GR +A LF +M Q V NS T++ +
Sbjct: 222 GRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
C + G +IHG V R+ + ++ + N L++MY K G + E VF ++ KD
Sbjct: 282 FKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDS 341
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
++WNS+I+G A FE+M D V++ ++ S G +++ +F M
Sbjct: 342 VSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKCVELFGM 397
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTLLNS 590
M + I + M+ G +EA M + PN+Y + ++L++
Sbjct: 398 MPEKDNIT-----WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 35/262 (13%)
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE- 365
+F N+ I + ++G+++ A+ +F ++ ++IVSW A+I++YAE G +A +VF ++
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 366 ----------------KLDGG-------SMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
K D G + N +S++ +I F GR +EA L+ +
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 403 --MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
++ VA++V +SG L + A+ R G V K ++ + +++ Y K
Sbjct: 170 TPVKFRDSVASNVLLSGYLRAGKWNEAV---RVFQGMAV-----KEVVSCSSMVHGYCKM 221
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG-FKPDGVAFVAV 519
G + + +F+++ ++++ITW +MI GY G E+ F M + G K + +
Sbjct: 222 GRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 520 LSACSHAGLVNEGRRIFDMMVR 541
AC EG +I ++ R
Sbjct: 282 FKACRDFVRYREGSQIHGLVSR 303
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 212/710 (29%), Positives = 355/710 (50%), Gaps = 97/710 (13%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
T++ LKQ+H LI + FL +L F + + +F F + L+NS
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQF---PNIFLYNS 81
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
++ V+N L+ L L++ +RK G+ GFTFPLV++AC S + G +H+ V
Sbjct: 82 LINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKL----GIDLHSLV 137
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
++ GF +V + L+ +Y+ G+++D+ KLFD++
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP------------------------ 173
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC 282
+ + VTWT+L S + GR E +DLF M + G++ + I VLS C
Sbjct: 174 -----------DRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC 222
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
H+G + G I E+ KN+ +
Sbjct: 223 V-----HVGDLDSGEWIVKYMEEMEMQKNSFV--------------------------RT 251
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
L+ YA+ G ++A VF SM ++++WS +I +ASN +E ++LF +
Sbjct: 252 TLVNLYAKCGKMEKARSVFD--------SMVEKDIVTWSTMIQGYASNSFPKEGIELFLQ 303
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
M + + +I G LS CA AL++G + R N+ + N L++MY KCG
Sbjct: 304 MLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGA 363
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
+ G VF+++++KD++ N+ ISG NG + + A F + + G PDG F+ +L
Sbjct: 364 MARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCG 423
Query: 523 CSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAY 582
C HAGL+ +G R F+ + + ++ +EHY CMVDL GRAG+L +A ++ +MPM PNA
Sbjct: 424 CVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAI 483
Query: 583 VWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAK 642
VWG LL+ CR+ K+T +AE + ++ L G+Y+ LSNIY+ GRW++AA+VR
Sbjct: 484 VWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMN 543
Query: 643 TKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILW 702
KG+KK+ G SWIE++ K+H F + + + LE+L +M G VP + + +
Sbjct: 544 KKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFF 603
Query: 703 EMMGKKNVKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRSTNGQLMK 752
++ ++ K R++G+ + KL + L L + + +GQ+++
Sbjct: 604 DVEEEE---------------KERVLGYHSEKLAVALGL-ISTDHGQVIR 637
Score = 43.1 bits (100), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 50/274 (18%), Positives = 110/274 (40%), Gaps = 44/274 (16%)
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
M + V + + + + ++ + + +N ++IH ++ ++ + + N LL +
Sbjct: 1 MSIVTVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQ 60
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
+ +L+F + ++ +NS+I+G+ N L L F + + G G F VL A
Sbjct: 61 TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 120
Query: 523 CSHA-----------------------------------GLVNEGRRIFDMMVREFRIEP 547
C+ A G +N+ ++FD + +
Sbjct: 121 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP-----DR 175
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKN---MPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
+ + + +G +EA D+ K M ++P++Y +L++C + D E +
Sbjct: 176 SVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV 235
Query: 605 SQIFGL-ITETTGSYMLLSNIYAASGRWEDAAKV 637
+ + + + + L N+YA G+ E A V
Sbjct: 236 KYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 211/692 (30%), Positives = 347/692 (50%), Gaps = 117/692 (16%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L + VLS +A GR+ DA ++P + L N ++R GL E AL Y M
Sbjct: 46 LKSLVLS-HAAAGRMHDALAAVRSSP-----DAFLHNVVIRGFADAGLPEAALAAYRAML 99
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN-VHIVNELIGMYAK 183
G D FTFP+V++ C +G+ G+ H+ +++G G+ V+ N L+ YAK
Sbjct: 100 AAGARPDRFTFPVVVKCCARLGALEE----GRAAHSAAIRLGLVGSEVYTGNSLLAFYAK 155
Query: 184 MGQMSDSFKLFDKVRVKNYISWNMMFSGF------ALNFDC------------------- 218
+G ++D+ ++FD + V++ ++WN M G+ AL DC
Sbjct: 156 LGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIA 215
Query: 219 -------DGAL----ELFKRMELEGLEPNFVTWTSLLSSHARCGRL-------------- 253
D AL E+ + GLE + TSLL + +CG +
Sbjct: 216 ALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRT 275
Query: 254 -----------------EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
EE D F M+ G +V +L+ CA + G+ +HG
Sbjct: 276 VVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHG 335
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
+V + F +V ++ AL+ +Y K G VK ++ +F ++ K +VSWN +I +Y + +E
Sbjct: 336 YVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNE 395
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
A+ +F LE L+ P+ + SAV+ AF +
Sbjct: 396 AITLF--LELLN--QPLYPDYFTMSAVVPAF--------------------------VLL 425
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
GLL C R++H ++VR+ +N LV N +++MY +CG + +F+++ K
Sbjct: 426 GLLRQC---------RQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGK 476
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D+I+WN++I GY ++G G+ AL F EM G +P+ FV+VL+ACS +G+ +EG F
Sbjct: 477 DVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQF 536
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
++M R++ I PQ+EHY CM DLLGRAG L+E ++++P+ P +WG+LL + R +
Sbjct: 537 NLMQRDYGIIPQIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRND 596
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
D+AE A +IF L + TG Y++LS++YA +GRWED ++R S KGL++ +S +E
Sbjct: 597 IDIAEYAAERIFELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVE 656
Query: 657 VKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
+ F +G+ K + EV + L+ ++
Sbjct: 657 LHGSSCSFVNGDMTHPQSKTIHEVSDVLSRKI 688
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 168/372 (45%), Gaps = 52/372 (13%)
Query: 33 CFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
C D L Q + +VH +I G + +L +Y + G + A +F T P
Sbjct: 221 CLDSALMQGR------EVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMP-- 272
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ + WN ++ NG E A +V+M+ G + T ++ AC S
Sbjct: 273 -SRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSL--- 328
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
+G+ VH +V + F +V + L+ MY+K+G++ S +F ++ K +SWN M + +
Sbjct: 329 -YGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAY 387
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
+ A+ LF + + L P++ T ++++ + G L +
Sbjct: 388 MYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQC---------------- 431
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ +H ++++ + + V NA++ +Y + GDV ++ +F +
Sbjct: 432 -------------------RQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDK 472
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ K+++SWN +I YA G A+E+FS++ K +G +PN ++ +V+ A + +G
Sbjct: 473 MAGKDVISWNTIIMGYAIHGQGKIALEMFSEM-KSNG---LQPNESTFVSVLTACSVSGM 528
Query: 393 GEEALDLFRKMQ 404
+E F MQ
Sbjct: 529 ADEGWIQFNLMQ 540
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 105/237 (44%), Gaps = 22/237 (9%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
LL+QC+ Q+H+ ++ + + V+ +YAR G + +R +F+
Sbjct: 427 LLRQCR------QMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKM---AGKD 477
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR---FRFS 153
+ WN+I+ +G + AL+++ +M+ G+ + TF V+ AC G +F+
Sbjct: 478 VISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFN 537
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV-KNYISWNMMFSGF 212
Q + + Q+ G + +L+G + G + + K + + + + W + +
Sbjct: 538 LMQRDYGIIPQIEHYG---CMTDLLG---RAGDLREVLKFIESIPITPTFRIWGSLLTAS 591
Query: 213 ALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
D D A +R+ ELE N + L S +A GR E+ + M ++G+
Sbjct: 592 RNRNDIDIAEYAAERIFELE--HDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGL 646
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 222/796 (27%), Positives = 380/796 (47%), Gaps = 132/796 (16%)
Query: 27 NNSLLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVL-SIYARFGRLFDA 82
+++ L C +L+ C+++ +Q+H + G + A L +Y + G + +
Sbjct: 98 DSATLSC---VLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEG 154
Query: 83 RNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
VFE P K + + W S+L ++ + L+ +MR G+ + FTF V+ A
Sbjct: 155 IEVFEGMP---KKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAV 211
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
G+ GQ VH ++ G + +V + N L+ MYAK G + D+ +F+ + ++
Sbjct: 212 ASQGA----LDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDM 267
Query: 203 ISWNMMFSGFALNFDCD-GALELF-------------------------KRMEL------ 230
+SWN + +G LN +C+ AL+LF K++ L
Sbjct: 268 VSWNTLMAGLQLN-ECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHS 326
Query: 231 ----EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR------------GIEVGAEA 274
G T+L ++++CG L + +++F M I+ G
Sbjct: 327 CVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIP 386
Query: 275 IAVVL----------------SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG 318
+AVVL S + + IH VIK ++ V AL+ Y
Sbjct: 387 LAVVLFSRMREDRVMPNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPSVGTALLASYS 446
Query: 319 KHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
K G + A ++F IE+K++V+W+A+++ +A+AG C+ A +F+
Sbjct: 447 KFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFN---------------- 490
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA-ESAALNIGREIHGH 437
KM + + N TIS ++ CA SA ++ GR+ H
Sbjct: 491 -----------------------KMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAI 527
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
++ + I V + L++MY + G ++ +VFE+ +DL++WNSMISGY +G A
Sbjct: 528 SIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKA 587
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
+ TF +M +G + DGV F+AV+ C+H GLV EG++ FD MVR+ +I P MEHYACMVD
Sbjct: 588 IETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVD 647
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
L RAG L E ++++MP A VW TLL +CR+HKN ++ + A ++ L + +
Sbjct: 648 LYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSST 707
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
Y+LLSNIYAA+G+W++ +VR + +KK AG SWI++K K+H F + + +
Sbjct: 708 YVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQI 767
Query: 678 CEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHRIVGFRNLKLGL 737
+ L+ + +++ G P+ +L ++ A++ K + L L
Sbjct: 768 YKKLKVIITRLKQDGYSPNTSFVLHDI-------------AEDQKEAMLVAHSERLALAF 814
Query: 738 RLLLSLRSTNGQLMKN 753
L+ + T Q++KN
Sbjct: 815 GLIATPPGTPLQIVKN 830
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 161/366 (43%), Gaps = 41/366 (11%)
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
+L +AR G + E +D F + R+ G+ V + ++ VL C + +G+ +H +K G
Sbjct: 70 VLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCG 129
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
+ G+V +L+ Y + G E +EVF
Sbjct: 130 HD---------------RGEVSAG---------------TSLVDMYMKCGSVCEGIEVFE 159
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
M + NV++W++++ A E + LF +M+ + N T + +LS
Sbjct: 160 --------GMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAV 211
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A AL++G+ +H V+ ++ V N L+NMY KCG +E+ VF +E +D+++WN
Sbjct: 212 ASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWN 271
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
++++G +N AL F E K + V+ C++ + R++ +++
Sbjct: 272 TLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKH 331
Query: 543 -FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
F + + + D + G L +A +I N W +++ C + + +A
Sbjct: 332 GFHLTGNV--MTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAV 389
Query: 602 AMASQI 607
+ S++
Sbjct: 390 VLFSRM 395
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 118/248 (47%), Gaps = 10/248 (4%)
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
R + + V+ +A G E LD F + V+ +S T+S +L C +G +
Sbjct: 61 RDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQ 120
Query: 434 IHGHVVRVSMNK-NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
+H V+ ++ + L++MYMKCG + EG VFE + KK+++TW S+++G
Sbjct: 121 LHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQ 180
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
+ +A F M G P+ F +VLSA + G ++ G+R+ V+ F +
Sbjct: 181 MHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK-FGCRSSVFVC 239
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL-----LNSCRMHKNTDVAEAMASQI 607
++++ + GL+++A + M + W TL LN C + E+ A+
Sbjct: 240 NSLMNMYAKCGLVEDAKSVFNWMETR-DMVSWNTLMAGLQLNECELEALQLFHESRAT-- 296
Query: 608 FGLITETT 615
G +T++T
Sbjct: 297 MGKMTQST 304
>gi|359497527|ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
gi|296083555|emb|CBI23551.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 193/620 (31%), Positives = 328/620 (52%), Gaps = 63/620 (10%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
++ Q KQVH +++ G + + AR + + A A+ V S W
Sbjct: 16 SVKQAKQVHALILIHGLSHLEPILARQILLSASNYSATVAQYVHSVLHHSKSPDSFSWAC 75
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI-VHNH 161
+R + +G ++ A LYV+M++ G+ F ++AC R + G + +H
Sbjct: 76 AIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACA-----RIAYRMGGLSIHGQ 130
Query: 162 VLQMGFQGN---VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
V + GF G +++ L+ Y K+G M + K+FD++ +N +SWN M +G+ +
Sbjct: 131 VQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKS--- 187
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
G L + +R+ E + + ++W S++S +AR G +E+ + LF M +R
Sbjct: 188 -GDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMPERN----------- 235
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
F + NA+I Y + GD+ A++ F + ++N
Sbjct: 236 ------------------------FASW----NAMISGYVEFGDIDSARSFFDAMPQRNN 267
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
VSW +I+ Y++ G D A E+F Q+ GG +++ ++A+I +A N R +EAL
Sbjct: 268 VSWMTMISGYSKCGDVDSACELFDQV----GGK----DLLLFNAMIACYAQNSRPKEALK 319
Query: 399 LFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
LF M V + +T++ ++S C++ L G I ++ R+ + + + LL++
Sbjct: 320 LFNNMLNPDVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDL 379
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCG +++ + +F + KKDL+ + +MI G G+NG +A+ F+EM++A P+ + F
Sbjct: 380 YAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITF 439
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
+ +L+A +HAGLV EG F M +++ + P ++HY MVDL GRAG LQEA +++K+MP
Sbjct: 440 IGLLTAYNHAGLVEEGYHCFTSM-KKYNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMP 498
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAK 636
M+P+A VWG LL +CR+H N + E A F L +TTG LLSNIYA+ RW+D +
Sbjct: 499 MQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYCSLLSNIYASGERWDDVKR 558
Query: 637 VRISAKTKGLKKVAGQSWIE 656
+R K KG K+ G SW+E
Sbjct: 559 LRKVTKEKGFSKIPGCSWME 578
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 197/664 (29%), Positives = 335/664 (50%), Gaps = 54/664 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA--RFGRLFDARNVFETAPFDCK 94
+ QC QLKQ+H ++ T + A+++L+ YA L A+NVF P +
Sbjct: 78 FIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIP---Q 134
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ WN+++R S+ + +++ M + FTFP + +A +
Sbjct: 135 PNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHL--- 191
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G ++H V++ ++ I+N LI Y G + ++F + K+ +S
Sbjct: 192 -GSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVS--------- 241
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
W +++++ A G ++ + LF M + ++
Sbjct: 242 --------------------------WNAMINAFALGGLPDKALLLFQEMEMKDVKPNVI 275
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ VLS CA G+ I ++ GF +++ + NA++ +Y K G + A++LF+++
Sbjct: 276 TMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKM 335
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
EK+IVSW ++ +A+ G DEA +F +M +W+A+I A+ NG+
Sbjct: 336 SEKDIVSWTTMLDGHAKLGNYDEAHCIFD--------AMPHKWTAAWNALISAYEQNGKP 387
Query: 394 EEALDLFRKMQLAK-VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
AL LF +MQL+K + VT+ L A+ A++ G IH ++ + +N N +
Sbjct: 388 RVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATS 447
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
LL+MY KCG L + VF +E+KD+ W++MI M G G+ AL F M+EA KP+
Sbjct: 448 LLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLEAYIKPN 507
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
V F +L AC+HAGLVNEG ++F+ M + I PQ++HY C+VD+ GRAGLL++A+ +
Sbjct: 508 AVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFI 567
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
+ MP+ P A VWG LL +C H N ++AE + L G+++LLSNIYA +G WE
Sbjct: 568 EKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWE 627
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
+ +R + +KK S I+V +H F G++ + + L+E++ + + G
Sbjct: 628 KVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYSKLDEISEKFKPIG 687
Query: 693 CVPD 696
PD
Sbjct: 688 YKPD 691
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 170/511 (33%), Positives = 292/511 (57%), Gaps = 16/511 (3%)
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
GQM + + D++ +++ + +L + A +F R+ PN W +++
Sbjct: 39 GQMLKTGLILDEIPASKLLAFCASPNSGSLAY----ARTVFDRI----FRPNTFMWNTMI 90
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
++ EE + L+ M + A +L C+ ++A + IH +IK GF
Sbjct: 91 RGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGFG 150
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
++ N+L+ VY K GD+K A+ LF ++++++ VSWN++I Y + G + A E+F+
Sbjct: 151 SEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNH- 209
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
M N+ISW+++I G+ +EAL+LF +MQ A + ++V + L CA+
Sbjct: 210 -------MPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACAD 262
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
L+ G+ IH ++ + + + ++ L++MY KCG LEE VF ++E+K + W +M
Sbjct: 263 LGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAM 322
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
ISGY ++G G AL F +M AG +P+ + F +L+ACSHAGLV+E + +F+ M R
Sbjct: 323 ISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHG 382
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
+P +EHY CMVDLLGRAGLL+EA ++++NMP++PNA +WG LLN+C +H N ++ + +
Sbjct: 383 FKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIG 442
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
+ + G Y+ L++I+AA+G W AA+VR K +G+ K+ G S I V H F
Sbjct: 443 KILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEF 502
Query: 665 SSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
+G+ +K + +LE++ ++ +G P
Sbjct: 503 LAGDESHPQIKEIDHMLEQIVERLREEGYKP 533
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 220/434 (50%), Gaps = 21/434 (4%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA--RFGRLFDARNVFETAPFDC 93
HLLQ+C + +L+Q+H Q++ TG A+++L+ A G L AR VF+
Sbjct: 23 HLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRI---F 79
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ ++ +WN+++R ++ E AL LY M V + +TFP +++AC M +
Sbjct: 80 RPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEET-- 137
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
Q +H H+++MGF ++ N L+ +Y+K G + + LFD+V ++ +SWN M G+
Sbjct: 138 --QQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYT 195
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ + A E+F M E N ++WTS++S G+ +E ++LF M+ GI++
Sbjct: 196 KCGEIEMAYEIFNHMP----ERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNV 251
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
A+ L CADL GK IH ++ K E + LI +Y K GD++ A +F ++
Sbjct: 252 ALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKM 311
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
EEK + W A+I+ YA G EA+E F K+ +E PN ++++ ++ A + G
Sbjct: 312 EEKGVSVWTAMISGYAIHGRGREALEWFM---KMQTAGVE-PNQMTFTGILTACSHAGLV 367
Query: 394 EEALDLFRKMQLAKVVANSVTISG-LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
EA LF M+ S+ G ++ + + L E+ + + + N +
Sbjct: 368 HEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEEL---IENMPVKPNAAIWGA 424
Query: 453 LLNMYMKCGCLEEG 466
LLN G LE G
Sbjct: 425 LLNACHIHGNLELG 438
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 46/219 (21%)
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK--CGCLEEGH 467
+N+ LL C+ L R+IHG +++ + + + + LL G L
Sbjct: 16 SNAAQTLHLLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYAR 72
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS--- 524
VF++I + + WN+MI GY + E AL + M+ + F +L ACS
Sbjct: 73 TVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMS 132
Query: 525 --------HAGLVNEG------------------------RRIFDMMVREFRIEPQMEHY 552
HA ++ G R +FD + + + +
Sbjct: 133 ASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVS-----W 187
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
M+D + G ++ A +I +MP E N W ++++ C
Sbjct: 188 NSMIDGYTKCGEIEMAYEIFNHMP-ERNIISWTSMISGC 225
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 219/708 (30%), Positives = 360/708 (50%), Gaps = 99/708 (13%)
Query: 45 HQLKQVHNQLIVTGANASAFLAARVLSIYA--RFGRLFDARNVFETAPFDCKSSSLLWNS 102
+++Q+H + T F+++R+L++Y+ + L AR++F+ + S + WN+
Sbjct: 27 QEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQ---RRSLIHWNT 83
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
I++ V N + + L+ ++ L D FT P VI+ C +G + G+ +H
Sbjct: 84 IIKCYVENQFSHDGIVLFHELVH-EYLPDNFTLPCVIKGCARLGVVQE----GKQIHGLA 138
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
L++GF +V + L+ MY+K G++ + K+FD + K+ + WN + G+A + D AL
Sbjct: 139 LKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIAL 198
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC 282
+LF+ M E + +WT L+ ++CG++E LFD M C
Sbjct: 199 QLFEEMP----ERDAFSWTVLVDGLSKCGKVESARKLFDQMP-----------------C 237
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
+L + NA+I Y K GD A LF ++ ++V+WN
Sbjct: 238 RNLVS----------------------WNAMINGYMKSGDFDSALELFYQMPIWDLVTWN 275
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
+I Y G +AV++F + KL GS RP+ + +V+ A
Sbjct: 276 LMIAGYELNGQFMDAVKMFFMMLKL--GS--RPSHATLVSVLSA---------------- 315
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
+SGL A L GR IH ++ + + ++ L+ MY KCGC
Sbjct: 316 ------------VSGL-------AVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGC 356
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
+E VF I+KK + W ++I G G++G+ +ALA F EM + G KP+ + F+ VL+A
Sbjct: 357 IESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNA 416
Query: 523 CSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAY 582
C+HAGLV++GR+ FDMM+ E++IEP +EHY C+VD+L RAG L+EA + ++NMP+ PN
Sbjct: 417 CNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKV 476
Query: 583 VWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAK 642
+W +LL R H D+ E A ++ + ET G Y+LLSN+YAASG WE + VR
Sbjct: 477 IWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMY 536
Query: 643 TKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILW 702
+G +K G S +E K +H F G+ K + + E+ +++ G VPD +L
Sbjct: 537 KRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLL 596
Query: 703 EMMGKKNVKRIQRIRADNIKSKHRIV-GFRNLKLG--LRLLLSLRSTN 747
+ G+K + +N + I G N+K G +R++ +LR N
Sbjct: 597 CIEGEKE----KEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCN 640
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 218/509 (42%), Gaps = 66/509 (12%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
+N L C + + + KQ+H + G + F+ ++++Y++ G + AR VF
Sbjct: 111 DNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVF 170
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+ +LWNS++ G + AL+L+ +M + D F++ +++
Sbjct: 171 DGM---IDKDVVLWNSLIDGYARCGEIDIALQLFEEMPER----DAFSWTVLVDG----- 218
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
+K G++ + KLFD++ +N +SWN
Sbjct: 219 ----------------------------------LSKCGKVESARKLFDQMPCRNLVSWN 244
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
M +G+ + D D ALELF +M + L VTW +++ + G+ + + +F MM K
Sbjct: 245 AMINGYMKSGDFDSALELFYQMPIWDL----VTWNLMIAGYELNGQFMDAVKMFFMMLKL 300
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
G + VLS + LA G+ IH ++ K GFE + +LI +Y K G ++ A
Sbjct: 301 GSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESA 360
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+F I++K + W A+I G+ + A+ +F ++ K + +PN I + V+ A
Sbjct: 361 LTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCK----TGLKPNAIIFIGVLNA 416
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISG-LLSVCAESAALNIGREIHGHVVRVSMNK 445
G ++ F M + ++ G L+ + + L E + + ++
Sbjct: 417 CNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHL---EEAKNTIENMPISP 473
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFE---QIEKKDLITWNSMISGYGMNGLGENALATFE 502
N ++ LL G ++ G + ++ + + + + + Y +G+ E E
Sbjct: 474 NKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVRE 533
Query: 503 EMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
M + GF+ D S+ H G ++E
Sbjct: 534 MMYKRGFRKD-----PGCSSVEHKGTLHE 557
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 205/691 (29%), Positives = 351/691 (50%), Gaps = 44/691 (6%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F LL T+ QL Q+ QLI+ G + ++ + G + R +F
Sbjct: 17 FLTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKV---S 73
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRK-LGVLGDGFTFPLVIRACKFMGSFRFRF 152
K L+N ++R NGL ++++ LY +RK + D FT+ I A + R
Sbjct: 74 KPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERV-- 131
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G ++H H + G N+ + + ++ +Y K + + K+FD + ++ + WN M SGF
Sbjct: 132 --GVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGF 189
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
+ N + ++ +F M GL + T ++L++ A M + + K+G+
Sbjct: 190 SRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDV 249
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ ++S+ + G+++ + + Y NA+I Y + + + A LF E
Sbjct: 250 YVLTGLISLYSKCGKSCKGRILFDQIDQPDLISY----NAMISGYTFNHETESAVTLFRE 305
Query: 333 I----EEKNIVSWNALITSYA----------------------EAGLCDEAVEVFSQLEK 366
+ + N + LI Y + + V+ +L +
Sbjct: 306 LLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNE 365
Query: 367 LDGGSM---ERP--NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
+ E P ++ SW+A+I + NG + A+ LF++M + ++ N VT++ +LS
Sbjct: 366 VQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSA 424
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
CA+ AL+IG+ +HG + + N+ V L++MY KCG + E +F+ + K+++TW
Sbjct: 425 CAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTW 484
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
N+MI+GYG++G G+ AL F EM+++G P GV F+++L ACSH+GLV+EG IF M
Sbjct: 485 NAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMAN 544
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
+ +P EHYACMVD+LGRAG L A + ++ MP+EP VWG LL +C +HKNT++A
Sbjct: 545 NYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMAN 604
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI 661
+ ++F L E G Y+LLSNIY+ + AA VR K + L K G + IE+ +
Sbjct: 605 VASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEIDDQQ 664
Query: 662 HMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
++F+SG+ + E+LE+L +M G
Sbjct: 665 YVFTSGDRSHPQATAIFEMLEKLTGKMREAG 695
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 196/667 (29%), Positives = 346/667 (51%), Gaps = 87/667 (13%)
Query: 34 FDHLLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
FD +L C + I Q+H ++V+G + + +LS+Y++ GR DA +F
Sbjct: 242 FDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS 301
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP-LVIRACKFMGSFR 149
++ ++ WN ++ V +GL E +L + +M GVL D TF L+ KF
Sbjct: 302 ---RADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFEN--- 355
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
+ + +H ++++ ++ + + LI Y K +S + +F + + + + M
Sbjct: 356 --LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMI 413
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
SG+ N +LE+F+ + + PN +T S
Sbjct: 414 SGYLHNGLYIDSLEMFRWLVKVKISPNEITLVS--------------------------- 446
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
+L V L A +G+ +HGF+IK GF++ + A+I +Y K G + +A
Sbjct: 447 --------ILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAY-- 496
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
E+F +L K D ++SW+++I A
Sbjct: 497 -----------------------------EIFERLSKRD--------IVSWNSMITRCAQ 519
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
+ A+D+FR+M ++ + + V+IS LS CA + + G+ IHG +++ S+ ++
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYS 579
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE-AG 508
++ L++MY KCG L+ VF+ +++K++++WNS+I+ G +G +++L F EM+E +G
Sbjct: 580 ESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG 639
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+PD + F+ ++S+C H G V+EG R F M ++ I+PQ EHYAC+VDL GRAG L EA
Sbjct: 640 IRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
+ VK+MP P+A VWGTLL +CR+HKN ++AE +S++ L +G Y+L+SN +A +
Sbjct: 700 YETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANA 759
Query: 629 GRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
WE KVR K + ++K+ G SWIE+ ++ H+F SG+ + ++ +L L ++
Sbjct: 760 REWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGEL 819
Query: 689 ENKGCVP 695
+G +P
Sbjct: 820 RLEGYIP 826
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 157/603 (26%), Positives = 280/603 (46%), Gaps = 67/603 (11%)
Query: 37 LLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LLQ C + Q KQVH LIV + ++ R+L +YA G D +F D
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYR--LDL 98
Query: 94 KSSSL-LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ SS+ WNSI+ V NGL AL Y KM GV D TFP +++AC + +F+
Sbjct: 99 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI- 157
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
+ + V +G N + + LI Y + G++ KLFD+V K+ + WN+M +G+
Sbjct: 158 ---DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTW-------------------------------- 240
A D ++ F M ++ + PN VT+
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 241 ---TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
SLLS +++CGR ++ LF MM + A+ + + + + M + + F
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSR------ADTVTWNCMISGYVQSGLMEESLTFF 328
Query: 298 --VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK----NIVSWNALITSYAEA 351
+I G ++L+ K +++ + + I +I +ALI +Y +
Sbjct: 329 YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC 388
Query: 352 GLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVAN 411
A +FSQ +D V+ ++A+I + NG ++L++FR + K+ N
Sbjct: 389 RGVSMAQNIFSQCNSVD--------VVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPN 440
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
+T+ +L V AL +GRE+HG +++ + + +++MY KCG + + +FE
Sbjct: 441 EITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE 500
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
++ K+D+++WNSMI+ + A+ F +M +G D V+ A LSAC++ +
Sbjct: 501 RLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESF 560
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
G+ I M++ + + + ++D+ + G L+ A ++ K M E N W +++ +C
Sbjct: 561 GKAIHGFMIKH-SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAAC 618
Query: 592 RMH 594
H
Sbjct: 619 GNH 621
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 64/320 (20%)
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
E ++++L C++ GK +H F+I + ++ +Y G
Sbjct: 32 ETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGK 91
Query: 329 LFS--EIEEKNIVSWNALITSYAEAGLCDEA---------------VEVFSQLEK----- 366
+F ++ +I WN++I+S+ GL ++A V F L K
Sbjct: 92 MFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL 151
Query: 367 --------------------------------LDGGSMERPN-----VISWSAVIGAFAS 389
L+ G ++ P+ V+ VI
Sbjct: 152 KNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVML 211
Query: 390 NGRGE-EALDL----FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
NG + ALD F M++ ++ N+VT +LSVCA +++G ++HG VV ++
Sbjct: 212 NGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVD 271
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
++N LL+MY KCG ++ +F + + D +TWN MISGY +GL E +L F EM
Sbjct: 272 FEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEM 331
Query: 505 IEAGFKPDGVAFVAVLSACS 524
I +G PD + F ++L + S
Sbjct: 332 ISSGVLPDAITFSSLLPSVS 351
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 193/650 (29%), Positives = 326/650 (50%), Gaps = 81/650 (12%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
Q H I T F+ + ++++Y + G + DAR VF+T P + +++ W +I+
Sbjct: 134 QAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIP---ERNTVSWATIISGYA 190
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+ A +L+ MR+ D F + V+ A + G+ +H L+ G
Sbjct: 191 MERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHY----GKQIHCLALKNGLL 246
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+ N L+ MY K G + D+ K F
Sbjct: 247 SIASVGNALVTMYGKCGCLDDALKTF---------------------------------- 272
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
EL G + + +TW+++++ +A+ G E ++LF M G + V++ C+D+ A
Sbjct: 273 ELSG-DKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGAL 331
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
GK IHG+ +K G+E ++ AL+ +Y K G + A+ F ++E
Sbjct: 332 EEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKE------------- 378
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
P+++ W+++I +A NG E AL L+ +MQ+ ++
Sbjct: 379 --------------------------PDIVLWTSMISGYAQNGENETALTLYCRMQMERI 412
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+ + +T++ +L C+ AAL G++IH ++ + + + + L MY KCG LE+G+L
Sbjct: 413 MPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNL 472
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
VF ++ +D++TWN+MISG NG G AL FEE+ KPD V FV VLSACSH GL
Sbjct: 473 VFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGL 532
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
V G+ F MM+ EF I P++EHYACMVD+L RAG L E + +++ ++ +W LL
Sbjct: 533 VERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILL 592
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
+CR ++N ++ ++ L ++ + +Y+LLS+IY A GR +D +VR K +G+ K
Sbjct: 593 GACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNK 652
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
G SWIE+K ++H+F G+ + + +C L L M+++ ND
Sbjct: 653 EPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHMKDECYESFND 702
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 193/439 (43%), Gaps = 82/439 (18%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ +H +L+ G +V++ N L+ +YAK G + + +F+ + K+ +SWN + +G++
Sbjct: 29 GKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYS- 87
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
+ V ++ + M+LF MR
Sbjct: 88 -------------------QKGTVGYSFV-------------MELFQRMRAENTLPNGHT 115
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIK-GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ V + + G H IK F D VFV ++LI +Y K G + A+ +F I
Sbjct: 116 FSGVFTAASSSPETFGGLQAHALAIKTSNFYD-VFVGSSLINMYCKIGCMLDARKVFDTI 174
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
E+N VSW +I+ YA + EA E+F + + +G
Sbjct: 175 PERNTVSWATIISGYAMERMAFEAWELFXLMRREEG------------------------ 210
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
A D F + V +++T+ L ++ G++IH ++ + V N L
Sbjct: 211 --AHDKF----IYTSVLSALTVPDL---------VHYGKQIHCLALKNGLLSIASVGNAL 255
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
+ MY KCGCL++ FE KD ITW++MI+GY G AL F M G KP
Sbjct: 256 VTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSE 315
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS---D 570
FV V++ACS G + EG++I ++ E Q+ +VD+ + G L +A D
Sbjct: 316 FTFVGVINACSDIGALEEGKQIHGYSLKA-GYECQIYFMTALVDMYAKCGSLVDARKGFD 374
Query: 571 IVKNMPMEPNAYVWGTLLN 589
+K EP+ +W ++++
Sbjct: 375 YLK----EPDIVLWTSMIS 389
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 168/360 (46%), Gaps = 46/360 (12%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
+H KQ+H + G + A + ++++Y + G L DA FE + + W+++
Sbjct: 230 VHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSG---DKDDITWSAM 286
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
+ G AL L+ M G FTF VI AC +G+ G+ +H + L
Sbjct: 287 ITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEE----GKQIHGYSL 342
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
+ G++ ++ + L+ MYAK G + D+ K FD ++ + + W M SG+A N + + AL
Sbjct: 343 KAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALT 402
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
L+ RM++E + P+ +T +A VL C+
Sbjct: 403 LYCRMQMERIMPHELT-----------------------------------MASVLRACS 427
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
LAA GK IH IK GF V + +AL +Y K G ++ +F + ++I++WNA
Sbjct: 428 SLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNA 487
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+I+ ++ G +A+E+F +L +P+ +++ V+ A + G E FR M
Sbjct: 488 MISGLSQNGEGLKALELFEELRH----GTTKPDYVTFVNVLSACSHMGLVERGKVYFRMM 543
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
LL C L G+ IH ++R ++ + N L+N+Y KCG + + LVFE I KD
Sbjct: 16 LLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKD 75
Query: 478 LITWNSMISGYGMNG-LGEN-ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
+++WN +I+GY G +G + + F+ M P+G F V +A S + G +
Sbjct: 76 VVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQA 135
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
+ ++ + ++++ + G + +A + +P E N W T+++ M +
Sbjct: 136 HALAIKTSNFYDVFVG-SSLINMYCKIGCMLDARKVFDTIP-ERNTVSWATIISGYAMER 193
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 202/657 (30%), Positives = 338/657 (51%), Gaps = 85/657 (12%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
+ +CKTI LKQ+H LI +G F+ ++V + + D F D +
Sbjct: 12 IHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVDYAFDFLNQT-DLHVGT 70
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC-KFMGSFRFRFSFGQ 156
L +N+++ S+ + A +Y ++ G + D +TFP+V++AC KF+G G+
Sbjct: 71 LPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLG-----VQEGE 125
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
VH ++MGF ++++ N L+ Y+ G+ + ++FD++ V++ +S
Sbjct: 126 QVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVS------------ 173
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
WT L+S + R G +E ++LF K +
Sbjct: 174 -----------------------WTGLISGYVRTGLFDEAINLF---LKMDVVPNVATFV 207
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
VL C + MGK +HG V K F + V NAL+ +Y K
Sbjct: 208 SVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVK----------------- 250
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
E LC EA ++F +L D ++SW+++I + +++
Sbjct: 251 ------------CEC-LC-EARKLFDELPDRD--------IVSWTSIISGLVQCKQPKDS 288
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
L+LF MQ++ V + + ++ +LS CA AL+ GR + ++ R + +I + L++M
Sbjct: 289 LELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDM 348
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCGC+E +F I +++ TWN+++ G M+G G AL FE MI AG +P+ V F
Sbjct: 349 YAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTF 408
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
+A+L+AC H+GLV EGR F M+ + F P++EHY CM+DLL RAGLL EA ++NM
Sbjct: 409 LAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNM 468
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
P+ P+ +WG LL++C+ + N ++++ + S + L ++ +G Y+LLSNIYA + RW+D
Sbjct: 469 PLPPDVLIWGALLSACKANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVT 528
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
+VR K KG++K G S IEV + H F G++ S +++ +L LA Q+ +G
Sbjct: 529 RVRRLMKDKGIRKFPGSSVIEVDGEAHEFLVGDTNHSRNEDIHILLNILANQVYLEG 585
>gi|8671867|gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich protein from Nicotiana glauca
gb|AF151215 and contains multiple PPR PF|01535 repeats
[Arabidopsis thaliana]
Length = 816
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 212/665 (31%), Positives = 355/665 (53%), Gaps = 52/665 (7%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
LQ+ + I +Q+ N+ IV+ ++A ++S YA G++ A VF+ P +S
Sbjct: 66 LQEAEAI--FRQMSNRSIVS------WIA--MISAYAENGKMSKAWQVFDEMPVRVTTS- 114
Query: 98 LLWNSILRVNVSNGL-YENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
+N+++ + N A +L+ + + + +RA RF +
Sbjct: 115 --YNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAG--------RFDEAE 164
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
++ + F+ +V N L+ Y + G+ +++ ++F + VK +S + M G+
Sbjct: 165 FLYAET-PVKFRDSV-ASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMG 222
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG-IEVGAEAI 275
A LF RM E N +TWT+++ + + G E+ LF MR+ G ++V + +
Sbjct: 223 RIVDARSLFDRMT----ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTL 278
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
AV+ C D G IHG V + E +F+ N+L+ +Y K G + A+ +F ++
Sbjct: 279 AVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN 338
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG-----------------------GSM 372
K+ VSWN+LIT + EA E+F ++ D G M
Sbjct: 339 KDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMM 398
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
+ I+W+A+I AF SNG EEAL F KM +V NS T S +LS A A L G
Sbjct: 399 PEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGL 458
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
+IHG VV++++ ++ VQN L++MY KCG + + +F I + +++++N+MISGY NG
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNG 518
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
G+ AL F + +G +P+GV F+A+LSAC H G V+ G + F M + IEP +HY
Sbjct: 519 FGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHY 578
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
ACMVDLLGR+GLL +AS+++ MP +P++ VWG+LL++ + H D+AE A ++ L
Sbjct: 579 ACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEP 638
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
++ Y++LS +Y+ G+ D ++ K+K +KK G SWI +K ++H F +G+ Q
Sbjct: 639 DSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQL 698
Query: 673 DLKNV 677
+L+ +
Sbjct: 699 NLEEI 703
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 166/415 (40%), Gaps = 88/415 (21%)
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
S +S HAR G L+E +F M R I ++ + + A M K F
Sbjct: 55 SQISKHARNGNLQEAEAIFRQMSNRSI------VSWIAMISAYAENGKMSKAWQVF---- 104
Query: 302 GFEDYVFVK-----NALICVYGKHG-DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
D + V+ NA+I K+ D+ A LF +I EKN VS+ +IT + AG D
Sbjct: 105 ---DEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFD 161
Query: 356 EAVEVFSQLE---------------KLDGGS----------MERPNVISWSAVIGAFASN 390
EA ++++ L G M V+S S+++ +
Sbjct: 162 EAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKM 221
Query: 391 GRGEEALDLFRKM--------------------------------QLAKVVANSVTISGL 418
GR +A LF +M Q V NS T++ +
Sbjct: 222 GRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
C + G +IHG V R+ + ++ + N L++MY K G + E VF ++ KD
Sbjct: 282 FKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDS 341
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
++WNS+I+G A FE+M D V++ ++ S G +++ +F M
Sbjct: 342 VSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKCVELFGM 397
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTLLNS 590
M + I + M+ G +EA M + PN+Y + ++L++
Sbjct: 398 MPEKDNIT-----WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 150/330 (45%), Gaps = 37/330 (11%)
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE- 365
+F N+ I + ++G+++ A+ +F ++ ++IVSW A+I++YAE G +A +VF ++
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 366 ----------------KLDGG-------SMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
K D G + N +S++ +I F GR +EA L+ +
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 403 --MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
++ VA++V +SG L + A+ R G V K ++ + +++ Y K
Sbjct: 170 TPVKFRDSVASNVLLSGYLRAGKWNEAV---RVFQGMAV-----KEVVSCSSMVHGYCKM 221
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG-FKPDGVAFVAV 519
G + + +F+++ ++++ITW +MI GY G E+ F M + G K + +
Sbjct: 222 GRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
AC EG +I ++ R +E + ++ + + G + EA + M
Sbjct: 282 FKACRDFVRYREGSQIHGLVSR-MPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK-NK 339
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
++ W +L+ K A + ++ G
Sbjct: 340 DSVSWNSLITGLVQRKQISEAYELFEKMPG 369
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 205/696 (29%), Positives = 351/696 (50%), Gaps = 59/696 (8%)
Query: 48 KQVHNQLIVTGAN-ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
KQ+H I G + + ++ +Y ++ + D R VFE P K + + W S+L
Sbjct: 123 KQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMP---KRNVVTWTSLLTG 179
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
+ +G + ++L+ +MR GV + TF V+ G G+ VH ++ G
Sbjct: 180 YIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQG----MVDLGRRVHAQSVKFG 235
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF- 225
V + N L+ MYAK G + ++ +F + ++ +SWN + +G LN AL+LF
Sbjct: 236 CCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFH 295
Query: 226 -KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
R + L + T+ +++ A +L L + KRG + ++ A
Sbjct: 296 DSRSSITMLTQS--TYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMD--AY 351
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI------ 338
A +G + F++ G ++ V A+I ++GDV +A LFS + E +
Sbjct: 352 SKAGQLGNALDIFLLMSGSQN-VVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFT 410
Query: 339 -----------------------------VSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
+ AL+ SY++ +EA+ +F +++ D
Sbjct: 411 YSTILTASVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKD- 469
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE-SAAL 428
V+SWSA++ +A G + A ++F KM + + N TIS ++ CA +A +
Sbjct: 470 -------VVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGV 522
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
++GR+ H ++ + + V + L++MY + G +E +FE+ +DL++WNSM+SGY
Sbjct: 523 DLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGY 582
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
+G + AL F +M G + DGV F++V+ C+HAGLV EG+R FD M R++ I P
Sbjct: 583 AQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPT 642
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
MEHYACMVDL RAG L EA +++ M VW TLL +C++HKN ++ + A ++
Sbjct: 643 MEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLL 702
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L + +Y+LLSNIY+A+G+W++ +VR TK +KK AG SWI++K K+H F + +
Sbjct: 703 SLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASD 762
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ + L + +++ +G PD L E+
Sbjct: 763 KSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHEV 798
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 181/393 (46%), Gaps = 48/393 (12%)
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAI 275
D GA + F + P+ T L HAR G + + +D F D+ R G VG A+
Sbjct: 53 DATGARQAFDEI------PHRNTLDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGAL 106
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
VL VC + +GK +HG I+ G + GDV V +L
Sbjct: 107 VGVLKVCGSVPDRVLGKQLHGLCIRCGHD---------------RGDVGVGTSLVDMY-- 149
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
+ W++++ + +VF +M + NV++W++++ + +G +
Sbjct: 150 ---MKWHSVV----------DGRKVFE--------AMPKRNVVTWTSLLTGYIQDGALSD 188
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
++LF +M+ V NSVT + +LSV A +++GR +H V+ + V N L+N
Sbjct: 189 VMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMN 248
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY KCG +EE +VF +E +D+++WN++++G +NG AL F + +
Sbjct: 249 MYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQST 308
Query: 516 FVAVLSACSHAGLVNEGRRIF-DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
+ V+ C++ + R++ ++ R F + ++D +AG L A DI
Sbjct: 309 YATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNV--MTALMDAYSKAGQLGNALDIFLL 366
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
M N W ++N C + + +A A+ S++
Sbjct: 367 MSGSQNVVSWTAMINGCIQNGDVPLAAALFSRM 399
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 172/375 (45%), Gaps = 61/375 (16%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+++ C I QL +Q+H+ ++ G ++ + ++ Y++ G+L +A ++F
Sbjct: 312 VIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLL--MSG 369
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + W +++ + NG A L+ +MR+ GV + FT+ ++ A S
Sbjct: 370 SQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTASV--------AS 421
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
+H V++ ++ + L+ Y+K+ ++ +F + K+ +SW+ M + +A
Sbjct: 422 LPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYA 481
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
D DGA +F +M + GL+PN T
Sbjct: 482 QAGDSDGATNIFIKMTMHGLKPNEFT---------------------------------- 507
Query: 274 AIAVVLSVCADLAAD-HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
I+ V+ CA A +G+ H IK D + V +AL+ +Y + G ++ AQ +F
Sbjct: 508 -ISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFER 566
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE----KLDGGSMERPNVISWSAVIGAFA 388
++++VSWN++++ YA+ G +A++VF Q+E ++DG +++ +VI A
Sbjct: 567 QTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDG--------VTFLSVIMGCA 618
Query: 389 SNGRGEEALDLFRKM 403
G EE F M
Sbjct: 619 HAGLVEEGQRYFDSM 633
>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 593
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 190/618 (30%), Positives = 318/618 (51%), Gaps = 57/618 (9%)
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
ARN+F+ P + + L ++ L + + L+ + M + G PLV ++
Sbjct: 23 ARNLFDAVP---RPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKS 79
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C S G+ VH H L G G+V ++ L+ YAK G M + FD++ VK+
Sbjct: 80 CALTASS----CQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKD 135
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
I N + +G++ D D A LF ME +W S+++ +A G E + LFD
Sbjct: 136 PIPINCLITGYSKAGDVDKARRLFDGMERR----TSASWNSMIACYAHGGEFREALALFD 191
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
M G A I V S+CA K G
Sbjct: 192 RMLSEGARPNAITITSVFSICA-----------------------------------KSG 216
Query: 322 DV---KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
D+ K ++L E + +N++ AL+ Y + D+A F ++ + D V+
Sbjct: 217 DLDTGKRVRDLIGEDDLQNVIVHTALMEMYVKCRAIDDARREFDRMSQRD--------VV 268
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHV 438
+WS +I +A NGR E+L+LF +M+ N VT+ G++S CA+ + + +I +
Sbjct: 269 AWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVTLVGVISACAQLGSDELVEQIGNYA 328
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
+ + + L++MY +CG + VF ++E+K +ITWNSMI G MNG E+A+
Sbjct: 329 ENQRLPLTSYLGSALIDMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAI 388
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
+ +E+M E G +P+ + FVA+L+AC+HAGLV++G F+ M RE + PQ+EH AC+VDL
Sbjct: 389 SLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDL 448
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
L ++G L EA + +M +EPNA +W TLL+SCR H + ++A+ + ++ + + + Y
Sbjct: 449 LCKSGGLWEAYKFICDMEVEPNAVIWTTLLSSCRAHADVELAKLASRKLLAMEPDNSSIY 508
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
+LLSNIYA +G W DA ++R ++K ++K++ SWI++ ++H F ++ +
Sbjct: 509 VLLSNIYADAGLWGDAREIRDLMRSKNVQKLSAYSWIKLDGEVHKFLVQDTYHPRSAEIY 568
Query: 679 EVLEELALQMENKGCVPD 696
+V+ L L ++ PD
Sbjct: 569 DVIHGLGLLLDRADSDPD 586
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 170/396 (42%), Gaps = 72/396 (18%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRL------FDARNVFETAPFDC------ 93
Q +QVH +V G F+ ++ YA+ G + FD V + P +C
Sbjct: 88 QGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKDPIPINCLITGYS 147
Query: 94 ----------------KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPL 137
+ +S WNS++ G + AL L+ +M G + T
Sbjct: 148 KAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARPNAITITS 207
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
V C G G+ V + + + Q NV + L+ MY K + D+ + FD++
Sbjct: 208 VFSICAKSGD----LDTGKRVRDLIGEDDLQ-NVIVHTALMEMYVKCRAIDDARREFDRM 262
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
++ ++W+ M +G+A N +LELF+RM+ PN VT
Sbjct: 263 SQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDCRPNEVT------------------ 304
Query: 258 DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
+ V+S CA L +D + + I + ++ +ALI +Y
Sbjct: 305 -----------------LVGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMY 347
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
+ G V A+++FS +E+K +++WN++I A G ++A+ ++ EK+ ++ PN
Sbjct: 348 TRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLY---EKMAENGVQ-PNE 403
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
I++ A++ A G ++ + F +M+ +V+ V
Sbjct: 404 ITFVALLAACTHAGLVDQGMAFFEEMKREHLVSPQV 439
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 133/297 (44%), Gaps = 16/297 (5%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++ +Y + + DAR F+ + + W++++ NG +L+L+ +M+
Sbjct: 242 LMEMYVKCRAIDDARREFDRMS---QRDVVAWSTMIAGYAQNGRPLESLELFERMKATDC 298
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ T VI AC +GS G N L + ++ + LI MY + G +
Sbjct: 299 RPNEVTLVGVISACAQLGSDELVEQIGNYAENQRLPL----TSYLGSALIDMYTRCGHVG 354
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ +F ++ K I+WN M G A+N + A+ L+++M G++PN +T+ +LL++
Sbjct: 355 RARSVFSRMEQKGVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITFVALLAACT 414
Query: 249 RCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGK-VIHGFVIKGGFEDY 306
G +++ M F +M R+ + E A ++ DL G + F+ E
Sbjct: 415 HAGLVDQGMAFFEEMKREHLVSPQVEHCACIV----DLLCKSGGLWEAYKFICDMEVEPN 470
Query: 307 VFVKNALICVYGKHGDV---KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
+ L+ H DV K+A +E N + L YA+AGL +A E+
Sbjct: 471 AVIWTTLLSSCRAHADVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGDAREI 527
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 199/666 (29%), Positives = 330/666 (49%), Gaps = 94/666 (14%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD---C 93
LL+QC + L+Q+H Q + + L ++ +S+ + T F
Sbjct: 27 LLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSISL---------KDFTYSTLIFSHITP 77
Query: 94 KSSSLLWNSILRVNVSNGL-YENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ +N +LR + Y L LY +M+ L + + FTFP V AC + R
Sbjct: 78 HPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRM-- 135
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
++ H V ++G + H VN ++ MY + G+ + K+FD++
Sbjct: 136 --ARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEIT-------------- 179
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVG 271
E + V+W SLLS +A+ G E +++F +R+ G E
Sbjct: 180 ---------------------EKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPD 218
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
++ VL C +L +G+ + GFV++ G + ++ +ALI +Y K G++ ++ +F
Sbjct: 219 EMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIF- 277
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
DG M + I+W+A I A+A NG
Sbjct: 278 ------------------------------------DG--MPSRDFITWNAAISAYAQNG 299
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
+EA+ LF M+ V N VT++ +LS CA AL++G+++ + + +I V
Sbjct: 300 MADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVAT 359
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG--F 509
L++MY KCG LE VF + +K+ +WN+MIS +G + AL+ FE M + G
Sbjct: 360 ALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSA 419
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
+P+ + FV++LSAC HAGLV+EG R+FDMM F + P++EHY+CMVDLL RAG L EA
Sbjct: 420 RPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAW 479
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASG 629
D+++ MP +P+ G L ++C+ KN D+ E + + L +G+Y++ S IY
Sbjct: 480 DVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLN 539
Query: 630 RWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
W+DAA++R + G+ K G SWIEV ++ F SG+ L D +V +++ L +++
Sbjct: 540 MWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDGLTLDSIDVRNIIDLLYEELK 599
Query: 690 NKGCVP 695
+G VP
Sbjct: 600 KEGYVP 605
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 184/404 (45%), Gaps = 62/404 (15%)
Query: 6 LHQPHQ-----FSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGAN 60
LH HQ SP+N + PF + N + I + H ++ G +
Sbjct: 102 LHLYHQMKTLNISPNNFTFPFVFLACAN------------LEEIRMARLAHCEVFKLGLD 149
Query: 61 ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY 120
++++Y R G AR VF+ + + WNS+L G A++++
Sbjct: 150 NDHHTVNSMVTMYFRCGENGVARKVFDEI---TEKDLVSWNSLLSGYAKLGFAREAVEVF 206
Query: 121 VKMRK-LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
++R+ G D + V+ AC +G G+ V V++ G + N +I + LI
Sbjct: 207 GRLREESGFEPDEMSLVSVLGACGELGDLEL----GRWVEGFVVERGMKVNSYIGSALIS 262
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MY+K G++ S ++FD + +++I+WN S +A N D A+ LF M+ G++PN VT
Sbjct: 263 MYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVT 322
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
T++LS+ CA + A +GK + +
Sbjct: 323 LTAVLSA-----------------------------------CASIGALDLGKQMDEYAT 347
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
G + +FV ALI +Y K G ++ AQ +F+++ KN SWNA+I++ A G EA+
Sbjct: 348 HRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALS 407
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+F ++ D G RPN I++ +++ A G +E LF M
Sbjct: 408 LFERMS--DEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMM 449
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 184/561 (32%), Positives = 301/561 (53%), Gaps = 61/561 (10%)
Query: 161 HVLQMGFQGNVHIVN------ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
HV + + + H+++ EL ++A + + + RV + ++N FS L
Sbjct: 9 HVSPLHHRPSTHLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKL 68
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
F A E+ W + L S A + + LF +R+ I
Sbjct: 69 IFQLLDASEV-------------THWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYT 115
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ VL C+ L GK++HG+V K G + +F++N ++ +Y G++ VA+ +F ++
Sbjct: 116 CSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMP 175
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
++++++WN +I + G + A ++F++ M NV SW+++IG +A G+ +
Sbjct: 176 QRDVITWNIMIARLVKMGDAEGAYKLFAE--------MPERNVRSWTSMIGGYAQCGKSK 227
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
EA+DLF +M+ A ++ N VT+ +L CA+ L +GR IH R KNI V N L+
Sbjct: 228 EAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLI 287
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY+KCGCLE+ +F+ +E++ +++W++MI+G +G E+ALA F +MI G KP+ V
Sbjct: 288 DMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAV 347
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F+ +L ACSH G+V +GR+ F M R++ I P++EHY CMVDL RAGLLQEA + + N
Sbjct: 348 TFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMN 407
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP+ PN VWG LL C++HKN +AE + L G Y++LSNIYA +GRWED
Sbjct: 408 MPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDV 467
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
A+VR + +G +W E+L +M+ KG V
Sbjct: 468 ARVRKLMRDRG-------TW---------------------------EKLLQRMKLKGYV 493
Query: 695 PDNDIILWEMMGKKNVKRIQR 715
P+ ++L +M + K + R
Sbjct: 494 PNTSVVLLDMEEDQKEKFLYR 514
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 224/453 (49%), Gaps = 22/453 (4%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
HLL + +LKQ+H L+ T + S+ +RV S+ A A+ +F+ S
Sbjct: 20 HLLHNFTSPFELKQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLD---AS 76
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
WN+ LR +A+ L+ ++R+ + D +T V++AC + R G
Sbjct: 77 EVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRN----G 132
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+IVH +V ++G Q N+ + N ++ +YA G++ + K+FDK+ ++ I+WN+M +
Sbjct: 133 KIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKM 192
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
D +GA +LF M E N +WTS++ +A+CG+ +E +DLF M G+ +
Sbjct: 193 GDAEGAYKLFAEMP----ERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTV 248
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
VL CAD+ +G+ IH F + G+E + V N LI +Y K G ++ A +F +EE
Sbjct: 249 VAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEE 308
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
+ +VSW+A+I A G ++A+ +F+++ ++ G +PN +++ ++ A + G E+
Sbjct: 309 RTVVSWSAMIAGLAAHGRAEDALALFNKM--INTGV--KPNAVTFIGILHACSHMGMVEK 364
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
F M + + G + A L +E H ++ + + N +V LL
Sbjct: 365 GRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLL--QEAHEFIMNMPIAPNGVVWGALLG 422
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
GC ++ + + L + + GY
Sbjct: 423 -----GCKVHKNVKLAEEATRHLSKLDPLNDGY 450
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 159/359 (44%), Gaps = 41/359 (11%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPF---------------- 91
K VH + G ++ FL ++ +YA G + AR VF+ P
Sbjct: 133 KIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKM 192
Query: 92 -DCKSSSLL-----------WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVI 139
D + + L W S++ G + A+ L+++M G+L + T V+
Sbjct: 193 GDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVL 252
Query: 140 RACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV 199
AC MG+ G+ +H+ + G++ N+ + N LI MY K G + D+ ++FD +
Sbjct: 253 VACADMGNL----VLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEE 308
Query: 200 KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDL 259
+ +SW+ M +G A + + AL LF +M G++PN VT+ +L + + G +E+
Sbjct: 309 RTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKY 368
Query: 260 F-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG 318
F M R GI E ++ + + + + H F++ V AL+
Sbjct: 369 FASMTRDYGIVPRIEHYGCMVDL---FSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCK 425
Query: 319 KHGDVKVAQNL---FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
H +VK+A+ S+++ N + L YAEAG ++ V + D G+ E+
Sbjct: 426 VHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMR--DRGTWEK 482
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 218/715 (30%), Positives = 347/715 (48%), Gaps = 71/715 (9%)
Query: 34 FDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + L Q +H ++ +G + LA +L IY G + A +FE
Sbjct: 131 FLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME 190
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
D S WN+ + N +G AL+L+ +M+ GV T + + C +
Sbjct: 191 RDLVS----WNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQ--- 243
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
Q +H V + G + + + L YA++G + + ++FD+ ++ +SWN M
Sbjct: 244 ----AQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLG 299
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWT----------------------------- 241
+A + A LF RM EG+ P+ VT
Sbjct: 300 AYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSLRFGRMIHGCALEKGLDRDIV 359
Query: 242 ---SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
+LL + RCG EE LF KR + A++ + M + + F
Sbjct: 360 LGNALLDMYTRCGSPEEARHLF----KR---IPCNAVSWNTMIAGSSQKGQMKRAVELFQ 412
Query: 299 ---IKGGFEDYVFVKNALICVYGKHGDVKV---AQNLFSEIEEKNIVSWNALITS----Y 348
++G N L V + + + L S I S A+ T+ Y
Sbjct: 413 RMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMY 472
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSME-RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
A G DEA F + G+ME R +V+SW+A+I + + +G G+ AL FR+M L
Sbjct: 473 ASCGAIDEAAASFQR------GAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHG 526
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
V N +T +L CA +AAL G +H H+ M N+ V L +MY +CG LE
Sbjct: 527 VAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAR 586
Query: 468 LVFEQIE-KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
+FE++ ++D++ +N+MI+ Y NGL AL F M + G +PD +FV+VLSACSH
Sbjct: 587 EIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHG 646
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GL +EG IF M + + I P +HYAC VD+LGRAG L +A ++++ M ++P VW T
Sbjct: 647 GLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKT 706
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL +CR +++ D S + L +Y++LSNI A +G+W++AA+VR +++GL
Sbjct: 707 LLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGL 766
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+K AG+SWIE+K ++H F +G+ + + LE L ++ G VPD ++L
Sbjct: 767 RKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVL 821
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 125/588 (21%), Positives = 240/588 (40%), Gaps = 138/588 (23%)
Query: 132 GFTFPL-VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
G T P ++R + G R S G+ +H ++ +G + + N L+ +Y K + D
Sbjct: 25 GATRPAHLVRLLRAAGDDRL-LSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDV 81
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR- 249
++F ++ V++ SW + + + + A+ +F RM+ EG+ + VT+ ++L + AR
Sbjct: 82 EEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARL 141
Query: 250 ----------------------------------CGRLEETMDLFDMMRK---------- 265
CG + M LF+ M +
Sbjct: 142 GDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKMERDLVSWNAAIA 201
Query: 266 --------------------RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
G+ + + L+VCA + + IH V + G E
Sbjct: 202 ANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATI---RQAQAIHFIVRESGLEQ 258
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL- 364
+ V AL Y + G + A+ +F E+++VSWNA++ +YA+ G EA +F+++
Sbjct: 259 TLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARML 318
Query: 365 ------------------------EKLDGGSMER---PNVISWSAVIGAFASNGRGEE-- 395
+ G ++E+ +++ +A++ + G EE
Sbjct: 319 HEGISPSKVTLVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEAR 378
Query: 396 ----------------------------ALDLFRKMQLAKVVANSVTISGLLSVCA---- 423
A++LF++MQL + T LL A
Sbjct: 379 HLFKRIPCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPE 438
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ---IEKKDLIT 480
E+ A+ GR++H +V + ++ MY CG ++E F++ ++ D+++
Sbjct: 439 EARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS 498
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WN++IS +G G+ AL F M G P+ + VAVL AC+ A + EG + D +
Sbjct: 499 WNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHL- 557
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
R +E + + + GR G L+ A +I + + +E + ++ ++
Sbjct: 558 RHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMI 605
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 176/367 (47%), Gaps = 21/367 (5%)
Query: 6 LHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFL 65
L Q Q P R TY N LL+ ++ + + + +++H++++ G + +
Sbjct: 410 LFQRMQLEGMAPVRA----TYLN-LLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAI 464
Query: 66 AARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
V+ +YA G + +A F+ + + + WN+I+ +G + AL + +M
Sbjct: 465 GTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDL 524
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
GV + T V+ AC + + G+IVH+H+ G + N+ + L MY + G
Sbjct: 525 HGVAPNQITCVAVLDACAGAAA----LTEGEIVHDHLRHSGMESNLFVATALASMYGRCG 580
Query: 186 QMSDSFKLFDKVRV-KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
+ + ++F+KV V ++ + +N M + ++ N AL+LF RM+ EG P+ ++ S+L
Sbjct: 581 SLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVL 640
Query: 245 SSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVC--ADLAADHMGKVIHGFVIKG 301
S+ + G +E ++F MR+ GI + A + V A AD ++I +K
Sbjct: 641 SACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLAD-AEELIRCMDVK- 698
Query: 302 GFEDYVFVKNALICVYGKHGDV---KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
V V L+ K+ DV ++A ++ E++ + ++ L A AG DEA
Sbjct: 699 ---PTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAA 755
Query: 359 EVFSQLE 365
EV +++E
Sbjct: 756 EVRTEME 762
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 122/253 (48%), Gaps = 14/253 (5%)
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
N L+ Y + + EVFS+LE D S W+ +I A+ +G+ + A+ +F
Sbjct: 66 NHLLRLYLKCESLGDVEEVFSRLEVRDEAS--------WTTIITAYTEHGQAKRAIGMFH 117
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+MQ V ++VT +L CA L+ GR IH +V + ++ N LL++Y CG
Sbjct: 118 RMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCG 177
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
C+ L+FE++E +DL++WN+ I+ +G AL F+ M G +P + V L+
Sbjct: 178 CVASAMLLFEKME-RDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALT 236
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
C+ + + + I +VRE +E + + R G L +A ++ + E +
Sbjct: 237 VCA---TIRQAQAIH-FIVRESGLEQTLVVSTALASAYARLGHLYQAKEVF-DRAAERDV 291
Query: 582 YVWGTLLNSCRMH 594
W +L + H
Sbjct: 292 VSWNAMLGAYAQH 304
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 189/611 (30%), Positives = 323/611 (52%), Gaps = 72/611 (11%)
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
S G+ +H+ ++ + + N I +Y+K G+++ + K F + N S+N + +
Sbjct: 24 LSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAA 83
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+A A +LF ++ EP+ V++ +L+S++A CG + LF MR+ G+++
Sbjct: 84 YAKESRPLIAHQLFDQIP----EPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMD 139
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
++ V++ C D + +H + GF+ YV V NAL+ YGK+GD+ A+ +F
Sbjct: 140 GFTLSAVITACCDDVG--LIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFY 197
Query: 332 EIEE-KNIVSWNALITSYAEA-------GLCDEAVE---------------VFSQLEKLD 368
+ ++ VSWN++I +Y + GL E V F+ LE L
Sbjct: 198 GMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLS 257
Query: 369 GG-----------------------------------------SMERPNVISWSAVIGAF 387
GG + P+++ W+ ++ +
Sbjct: 258 GGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGY 317
Query: 388 ASNGRG-EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
+ N E+AL+ FR+MQ N + ++S C+ ++ + G++IH ++ + N
Sbjct: 318 SQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSN 377
Query: 447 -ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
I V N L+ MY KCG L++ +F+++ + + ++ NSMI+GY +G+ +L F+ M+
Sbjct: 378 RISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWML 437
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
E P + F++VLSAC+H G V EG F+MM +F IEP+ EHY+CM+DLLGRAG L
Sbjct: 438 ERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKL 497
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
EA +++ MP P + W +LL +CR H N ++A A+Q+ L Y++LSN+Y
Sbjct: 498 SEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMY 557
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A++GRWE+ A VR + +G+KK G SWIEVK++IH+F + +S +K + E LEE++
Sbjct: 558 ASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMS 617
Query: 686 LQMENKGCVPD 696
+M+ G VPD
Sbjct: 618 GKMKRAGYVPD 628
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 171/346 (49%), Gaps = 28/346 (8%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGR-LFDARNVFE--TAPFDCKSSSLLWNSILR 105
Q H QLI TG + ++ + + ++ +Y++ G + D R VFE T P +LWN+++
Sbjct: 261 QFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEP-----DLVLWNTMVS 315
Query: 106 VNVSNGLY-ENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
N + E+AL+ + +M+ +G + +F VI AC + S S G+ +H+ L+
Sbjct: 316 GYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSP----SQGKQIHSLALK 371
Query: 165 MGFQGN-VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
N + + N LI MY+K G + D+ +LFD++ N +S N M +G+A + +L
Sbjct: 372 SDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLH 431
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVC 282
LF+ M + P +T+ S+LS+ A GR+EE + F+MM+++ IE AE + ++ +
Sbjct: 432 LFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLL 491
Query: 283 ADLAADHMGKV--IHGFVIKGGFEDYVFVKNALICVYGKHGDVKV---AQNLFSEIEEKN 337
GK+ + + F +L+ HG++++ A N ++E N
Sbjct: 492 G-----RAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSN 546
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
+ L YA AG +E V + D G ++P SW V
Sbjct: 547 AAPYVVLSNMYASAGRWEEVATVRKFMR--DRGVKKKPGC-SWIEV 589
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 58/146 (39%), Gaps = 32/146 (21%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE------------ 465
LL C L+ G+ +H ++ + + N + +Y KCG L
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 466 -------------------GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
H +F+QI + DL+++N++IS Y G AL F M E
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 507 AGFKPDGVAFVAVLSA-CSHAGLVNE 531
G DG AV++A C GL+ +
Sbjct: 134 MGLDMDGFTLSAVITACCDDVGLIGQ 159
>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 335 bits (858), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 198/649 (30%), Positives = 323/649 (49%), Gaps = 77/649 (11%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L + L+ + GRL DA ++F+ P + + + W S++ NG E AL ++ M
Sbjct: 50 LECKRLNRLVKSGRLADALDLFDRMP---RKNVVAWTSVMSGCTRNGRPEAALAMFADMV 106
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
+ GV + F + AC +G+ R G+ VH+ ++ GF G+ I + LI MY++
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRA----GEQVHSLAVRAGFAGDAWIGSCLIEMYSRC 162
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G + A E+F RM+ P+ V +TSL+
Sbjct: 163 GSLP-------------------------------AAKEVFDRMD----SPDVVGYTSLI 187
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK--GG 302
S+ R G E + M K+G++ + +L+ C + +G+ IHG++IK G
Sbjct: 188 SAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGL 243
Query: 303 FEDYVFVKNALICVY-----------------GKHGDVKVAQNLFSEIEEKNIVS----W 341
V+ ALI Y G G + + + L + ++++
Sbjct: 244 RSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVS 303
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
NAL++ Y GL +E + +++E P+++SW+ I A NG GE+A+ L
Sbjct: 304 NALLSMYGRTGLVEELEAMLNKIEN--------PDLVSWTTAISANFQNGFGEKAIALLC 355
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+M N S +LS CA+ A+L+ G + H +++ + I N L+NMY KCG
Sbjct: 356 QMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCG 415
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
+ L F+ + D+ +WNS+I G+ +G AL F +M G KPD F+ VL
Sbjct: 416 QMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLM 475
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
C+H+G+V EG F +M+ ++ P HYACM+D+LGR G EA ++ +MP EP+A
Sbjct: 476 GCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDA 535
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISA 641
+W TLL SC++H+N D+ + A ++ L + SY+L+SNIYA G WEDA KVR
Sbjct: 536 LIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRM 595
Query: 642 KTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
G+KK AG SWIE+ ++H F+S + + ++ ++L EL M++
Sbjct: 596 DETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 644
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 153/345 (44%), Gaps = 52/345 (15%)
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKR---------------------------- 266
P+ V L+ + GRL + +DLFD M ++
Sbjct: 46 PDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADM 105
Query: 267 ---GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
G+ A L CADL A G+ +H ++ GF ++ + LI +Y + G +
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER--------- 374
A+ +F ++ ++V + +LI+++ G + A E Q+ K E
Sbjct: 166 PAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTAC 225
Query: 375 PNVISWS------AVIGAFASNGRGEEAL-DLFRKMQLAKVVANSVTISGLLSVCAESAA 427
P V+ IG + + AL D + + + V N +S +L C +
Sbjct: 226 PRVLGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNE--GVDPNEFALSIVLGAC---GS 280
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
+ +GR++H ++ + +I V N LL+MY + G +EE + +IE DL++W + IS
Sbjct: 281 IGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISA 340
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
NG GE A+A +M GF P+G AF +VLS+C+ +++G
Sbjct: 341 NFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQG 385
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 217/497 (43%), Gaps = 44/497 (8%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+QVH+ + G A++ + ++ +Y+R G L A+ VF+ + + S++
Sbjct: 134 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMD---SPDVVGYTSLISAF 190
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ-MG 166
NG +E A + ++M K G+ + T ++ AC + GQ +H ++++ +G
Sbjct: 191 CRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV--------LGQQIHGYLIKKIG 242
Query: 167 FQG-NVHIVNELIGMYAK-MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD------- 217
+ +V+ LI Y++ G + F L + I A+ D
Sbjct: 243 LRSQSVYSSTALIDFYSRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRV 302
Query: 218 CDGALELFKRM----ELEGL-----EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+ L ++ R ELE + P+ V+WT+ +S++ + G E+ + L M G
Sbjct: 303 SNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGF 362
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
A + VLS CAD+A+ G H +K G + + NALI +Y K G + A+
Sbjct: 363 TPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARL 422
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
F + ++ SWN+LI +A+ G ++A+EVFS++ + +P+ ++ V+
Sbjct: 423 AFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRS----NGIKPDDSTFLGVLMGCN 478
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR--EIHGHVVRVSMNKN 446
+G EE FR M + S T + C GR E + + +
Sbjct: 479 HSGMVEEGELFFRLM----IDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPD 534
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFE---QIEKKDLITWNSMISGYGMNGLGENALATFEE 503
L+ LL L+ G L + ++ +D ++ M + Y M+G E+A
Sbjct: 535 ALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRR 594
Query: 504 MIEAGFKPD-GVAFVAV 519
M E G K D G +++ +
Sbjct: 595 MDETGVKKDAGCSWIEI 611
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 335 bits (858), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 189/611 (30%), Positives = 323/611 (52%), Gaps = 72/611 (11%)
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
S G+ +H+ ++ + + N I +Y+K G+++ + K F + N S+N + +
Sbjct: 24 LSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNVFSFNAIIAA 83
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+A A +LF ++ EP+ V++ +L+S++A CG + LF MR+ G+++
Sbjct: 84 YAKESRPLIAHQLFDQIP----EPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMD 139
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
++ V++ C D + +H + GF+ YV V NAL+ YGK+GD+ A+ +F
Sbjct: 140 XFTLSAVITACCDDVG--LIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFY 197
Query: 332 EIEE-KNIVSWNALITSYAEA-------GLCDEAVE---------------VFSQLEKLD 368
+ ++ VSWN++I +Y + GL E V F+ LE L
Sbjct: 198 GMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLS 257
Query: 369 GG-----------------------------------------SMERPNVISWSAVIGAF 387
GG + P+++ W+ ++ +
Sbjct: 258 GGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGY 317
Query: 388 ASNGRG-EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
+ N E+AL+ FR+MQ N + ++S C+ ++ + G++IH ++ + N
Sbjct: 318 SQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSN 377
Query: 447 -ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
I V N L+ MY KCG L++ +F+++ + + ++ NSMI+GY +G+ +L F+ M+
Sbjct: 378 RISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWML 437
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
E P + F++VLSAC+H G V EG F+MM +F IEP+ EHY+CM+DLLGRAG L
Sbjct: 438 ERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKL 497
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
EA +++ MP P + W +LL +CR H N ++A A+Q+ L Y++LSN+Y
Sbjct: 498 SEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMY 557
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A++GRWE+ A VR + +G+KK G SWIEVK++IH+F + +S +K + E LEE++
Sbjct: 558 ASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMS 617
Query: 686 LQMENKGCVPD 696
+M+ G VPD
Sbjct: 618 GKMKRAGYVPD 628
Score = 110 bits (275), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 171/346 (49%), Gaps = 28/346 (8%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGR-LFDARNVFE--TAPFDCKSSSLLWNSILR 105
Q H QLI TG + ++ + + ++ +Y++ G + D R VFE T P +LWN+++
Sbjct: 261 QFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEP-----DLVLWNTMVS 315
Query: 106 VNVSNGLY-ENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
N + E+AL+ + +M+ +G + +F VI AC + S S G+ +H+ L+
Sbjct: 316 GYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSP----SQGKQIHSLALK 371
Query: 165 MGFQGN-VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
N + + N LI MY+K G + D+ +LFD++ N +S N M +G+A + +L
Sbjct: 372 SDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLH 431
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVC 282
LF+ M + P +T+ S+LS+ A GR+EE + F+MM+++ IE AE + ++ +
Sbjct: 432 LFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLL 491
Query: 283 ADLAADHMGKV--IHGFVIKGGFEDYVFVKNALICVYGKHGDVKV---AQNLFSEIEEKN 337
GK+ + + F +L+ HG++++ A N ++E N
Sbjct: 492 G-----RAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSN 546
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
+ L YA AG +E V + D G ++P SW V
Sbjct: 547 AAPYVVLSNMYASAGRWEEVATVRKFMR--DRGVKKKPGC-SWIEV 589
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 32/146 (21%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE------------ 465
LL C L+ G+ +H ++ + + N + +Y KCG L
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 466 -------------------GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
H +F+QI + DL+++N++IS Y G AL F M E
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 507 AGFKPDGVAFVAVLSA-CSHAGLVNE 531
G D AV++A C GL+ +
Sbjct: 134 MGLDMDXFTLSAVITACCDDVGLIGQ 159
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 172/465 (36%), Positives = 269/465 (57%), Gaps = 30/465 (6%)
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
G+ G + V CA +G+ IH + G + VFV ++ I +Y + G A
Sbjct: 7 GLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDA 66
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL-----EKLDGGSMER------- 374
+F E++ +++VSWNA+I+ +A AGL A++VF +L K D G+M
Sbjct: 67 YQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGK 126
Query: 375 ------------------PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
+ISW+A++ + +N EA++LF +MQ + ++VT++
Sbjct: 127 ARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLA 186
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
+L C E +AL++G+ IH + R M ++L++N L++MY CGCL+E VF+ + +
Sbjct: 187 TVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTR 246
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D+++W S+IS YG +G G A+ FE+M G +PD +AFVA+L+ACSHAGL++ G+ F
Sbjct: 247 DVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYF 306
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
M EF I P++EHYACMVDLLGRAG ++EA D + MP++PN VWG LL +CR+H N
Sbjct: 307 YSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSN 366
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
D+ A + L + TG Y+LLSNIYA +GRW D + VR ++KG+KK+ G S E
Sbjct: 367 MDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAE 426
Query: 657 VKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ ++H F G++ K + + L EL ++ G P+ + L
Sbjct: 427 LGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATL 471
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 152/300 (50%), Gaps = 44/300 (14%)
Query: 127 GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ 186
G+L P+ ++C G+ +H+ ++G GNV + + I MYA+ G+
Sbjct: 7 GLLPGPLHLPVGFKSCAATDGL----VLGRQIHSSTARLGLDGNVFVAHSAISMYARCGR 62
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLS 245
D++++F++++ ++ +SWN M SGFA A+++F+ + L+ +P+ T S+L
Sbjct: 63 PDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILP 122
Query: 246 SHARCGRLE----------------------------------ETMDLFDMMRKRGIEVG 271
S + R+E E ++LF M+K GIE
Sbjct: 123 SMGK-ARVEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPD 181
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
A +A VL C +++A +GK IH + + + ++NAL+ +Y G +K A+++F
Sbjct: 182 AVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFD 241
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+ +++VSW ++I++Y G EA+++F EK+ G +E P+ I++ A++ A + G
Sbjct: 242 SMGTRDVVSWTSIISAYGRHGHGREAIDLF---EKMCGQGLE-PDSIAFVAILAACSHAG 297
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 88/155 (56%), Gaps = 4/155 (2%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN++L V +N ++ A++L+++M+K G+ D T V+ +C + + S G+ +H
Sbjct: 150 WNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSAL----SLGKRIH 205
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+ + ++ + N L+ MYA G + ++ +FD + ++ +SW + S + +
Sbjct: 206 EVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGR 265
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
A++LF++M +GLEP+ + + ++L++ + G L+
Sbjct: 266 EAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLD 300
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 99/250 (39%), Gaps = 37/250 (14%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C + L K++H + +S L ++ +YA G L +AR+VF++
Sbjct: 188 VLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMG--- 244
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ W SI+ +G A+ L+ KM G+ D F ++ AC G
Sbjct: 245 TRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAG------- 297
Query: 154 FGQIVHNHVLQMG------FQGNVHIVNEL------IGMYAKMGQMSDSFKLFDKVRVK- 200
+L MG HI +L + + + G + +++ + +K
Sbjct: 298 --------LLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKP 349
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDL 259
N W + ++ + D + L L L P + LLS+ +AR GR + +
Sbjct: 350 NERVWGALLGACRIHSNMD--IGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMV 407
Query: 260 FDMMRKRGIE 269
+M +GI+
Sbjct: 408 RSVMESKGIK 417
>gi|297847764|ref|XP_002891763.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
gi|297337605|gb|EFH68022.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
Length = 828
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 205/646 (31%), Positives = 342/646 (52%), Gaps = 42/646 (6%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGL-YENALKLYVKMRKLG 127
++S YA G++ A VF+ P +S +N+++ + N A +L+ + +
Sbjct: 87 MISAYAENGKMSKAWQVFDEMPVRATTS---YNAMITAMIKNKCDLGKAYELFCDIPEKN 143
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
+ +RA RF + ++ + F+ V N L+ Y ++G+
Sbjct: 144 AVSYATMITGFVRAG--------RFDEAECLYAET-PVKFRDPV-ASNVLLSGYLRVGKW 193
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
+++ ++F+ + VK +S++ M G+ A LF RM E N +TWT+++ +
Sbjct: 194 NEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILDARSLFDRMP----ERNVITWTAMIDGY 249
Query: 248 ARCGRLEETMDLFDMMRKRG-IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY 306
+ G E+ LF MR+ G + V + +AV+ C D G IHG + + E
Sbjct: 250 FKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVMFRACRDFFRYREGSQIHGLLSRMPLEFD 309
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
+F+ N+LI +Y K G + A+ +F ++ K+ VSWN+LIT + EA E+F ++
Sbjct: 310 LFLGNSLISMYSKLGYMGEAKAVFGVMKYKDSVSWNSLITGLVQREQISEAYELFEKMPG 369
Query: 367 LDG-----------------------GSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
D G M + I+W+A+I AF SNG EEAL F KM
Sbjct: 370 KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDDITWTAMISAFVSNGYYEEALCWFHKM 429
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
+V NS T S +LS A A L G +IHG VV+++M ++ VQN L++MY KCG
Sbjct: 430 LRKQVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNMANDLSVQNSLVSMYCKCGNT 489
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
+ + +F I + +++++N+MISG+ NG G+ A+ F + G +P+GV F+A+LSAC
Sbjct: 490 NDAYKIFSCISEPNIVSYNTMISGFSYNGFGKEAVKLFSMLESTGKEPNGVTFLALLSAC 549
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
H G V+ G + F M + IEP +HYACMVDL GR+GLL EA +++ MP EP++ V
Sbjct: 550 VHVGYVDLGWKYFKSMKFSYGIEPGPDHYACMVDLFGRSGLLDEAYNLISTMPCEPHSGV 609
Query: 584 WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKT 643
WG+LL++ + H D+AE A ++ L ++ Y++LS +Y+ G+ D ++ K+
Sbjct: 610 WGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSMVGKNSDCDRIMNIKKS 669
Query: 644 KGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
K +KK G SWI +K ++H F +G+ +L+ + L+ + +ME
Sbjct: 670 KRIKKDPGSSWIILKGQVHNFLAGDESHLNLEEIAFTLDMIGNEME 715
Score = 109 bits (273), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 199/467 (42%), Gaps = 60/467 (12%)
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
N S A N + A +F++M + V+W +++S++A G++ + +FD M
Sbjct: 54 NSQISKLARNGNLQEAEAIFRQMSHRSI----VSWNAMISAYAENGKMSKAWQVFDEMPV 109
Query: 266 RGIEVGAEAIAVVLSVCADLA-------------ADHMGKVIHGFVIKGGFEDY------ 306
R I ++ DL A +I GFV G F++
Sbjct: 110 RATTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAECLYAE 169
Query: 307 -------VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
N L+ Y + G A +F + K +VS+++++ Y + G +A
Sbjct: 170 TPVKFRDPVASNVLLSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILDARS 229
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM-QLAKVVANSVTISGL 418
+F + M NVI+W+A+I + G E+ LF +M Q V NS T++ +
Sbjct: 230 LFDR--------MPERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVM 281
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
C + G +IHG + R+ + ++ + N L++MY K G + E VF ++ KD
Sbjct: 282 FRACRDFFRYREGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYKDS 341
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
++WNS+I+G A FE+M D V++ ++ S G +++ +F M
Sbjct: 342 VSWNSLITGLVQREQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKCVELFGM 397
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTLLNSCRMHK 595
M + I + M+ G +EA M + PN+Y + ++L++
Sbjct: 398 MPEKDDIT-----WTAMISAFVSNGYYEEALCWFHKMLRKQVCPNSYTFSSVLSAT--AS 450
Query: 596 NTDVAEAMASQIFGLITETTGSYML-----LSNIYAASGRWEDAAKV 637
D+ E + QI G + + + L L ++Y G DA K+
Sbjct: 451 LADLIEGL--QIHGRVVKMNMANDLSVQNSLVSMYCKCGNTNDAYKI 495
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 146/310 (47%), Gaps = 37/310 (11%)
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE- 365
+F N+ I ++G+++ A+ +F ++ ++IVSWNA+I++YAE G +A +VF ++
Sbjct: 50 IFQCNSQISKLARNGNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVFDEMPV 109
Query: 366 ----------------KLDGG-------SMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
K D G + N +S++ +I F GR +EA L+ +
Sbjct: 110 RATTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAECLYAE 169
Query: 403 --MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
++ VA++V +SG L V + A+ R G V K ++ + +++ Y K
Sbjct: 170 TPVKFRDPVASNVLLSGYLRVGKWNEAV---RVFEGMAV-----KEVVSYSSMVDGYCKM 221
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG-FKPDGVAFVAV 519
G + + +F+++ ++++ITW +MI GY G E+ F M + G + + +
Sbjct: 222 GRILDARSLFDRMPERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVM 281
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
AC EG +I ++ R +E + ++ + + G + EA + M +
Sbjct: 282 FRACRDFFRYREGSQIHGLLSR-MPLEFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYK- 339
Query: 580 NAYVWGTLLN 589
++ W +L+
Sbjct: 340 DSVSWNSLIT 349
>gi|302782567|ref|XP_002973057.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
gi|300159658|gb|EFJ26278.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
Length = 531
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 193/586 (32%), Positives = 311/586 (53%), Gaps = 57/586 (9%)
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+Y + G + +AR VF+ ++ W S++ +NG + AL LY +M G+ D
Sbjct: 1 MYGKCGSVEEARKVFDGIK---NRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPD 57
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
TF + AC + + G+ +H ++ + + + + LI MYA+ G +S +
Sbjct: 58 SITFTSALLACT-------KLADGKAIHARIVSSNMESDF-VGSALINMYARCGDVSSAR 109
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
+ F+K++ K+ V WTSL++++ + G
Sbjct: 110 QAFEKIQNKH-----------------------------------VVCWTSLMTAYVQTG 134
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
E +DL+ M G+ L CA L A GK IH V + GF+ V V
Sbjct: 135 HYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHLRVSECGFQSLV-VHT 193
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
AL+ +Y K G++ A+ +F+ + N+ NAL+T YA+ G + A F +
Sbjct: 194 ALLTMYAKCGELDAARAVFNRLA-SNVAVQNALVTMYAKCGSLELAKSAFE--------A 244
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
R +++SW+A+IGA+A +G G EALDL++ M V+ + VTI+ LS CA S +L +G
Sbjct: 245 SGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLG 304
Query: 432 REIHGHVVR-VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
REIH V++ S +++VQ L+NMY +CG LE +FE + ++D+++W +M S Y
Sbjct: 305 REIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSVYAQ 364
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
G + L + EM+ G +P+ + F ++L CSHAGL+ G F M E + P E
Sbjct: 365 QGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIRE 424
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL 610
H+ CMVDLLGR+G L++A +V++MP +P++ W T+L SC+ H + D A+ A ++ L
Sbjct: 425 HFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKEL 484
Query: 611 ITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
E T Y LLS+I+ A+G ++A +V++S K GLKK GQS IE
Sbjct: 485 DPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIE 530
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 198/382 (51%), Gaps = 27/382 (7%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
IT+ ++LL C L K IH IV+ S F+ + ++++YAR G + AR
Sbjct: 59 ITFTSALLACTK--LADGKAIHAR-------IVSSNMESDFVGSALINMYARCGDVSSAR 109
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
FE + W S++ V G Y AL LY +M GV DG T+ + AC
Sbjct: 110 QAFEKIQ---NKHVVCWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTALGACA 166
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
+G+ + G+ +H V + GFQ V + L+ MYAK G++ + +F+++ N
Sbjct: 167 SLGALK----EGKAIHLRVSECGFQSLV-VHTALLTMYAKCGELDAARAVFNRL-ASNVA 220
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
N + + +A C G+LEL K + V+W +++ ++A+ G E +DL+ M
Sbjct: 221 VQNALVTMYA---KC-GSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTM 276
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG-GFEDYVFVKNALICVYGKHGD 322
+G+ IA LS CA + +G+ IH V+K F+ + V+ AL+ +YG+ G
Sbjct: 277 TSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQSSLMVQTALVNMYGRCGR 336
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
++ A+++F ++ +++++SW A+ + YA+ G D+ ++++ LE + G RPN I++++
Sbjct: 337 LETARSMFEDMGQRDVLSWTAMTSVYAQQGHADQVLDLY--LEMVLHGI--RPNEITFTS 392
Query: 383 VIGAFASNGRGEEALDLFRKMQ 404
++ + G ++ F +MQ
Sbjct: 393 ILVGCSHAGLLARGVECFLEMQ 414
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 206/671 (30%), Positives = 327/671 (48%), Gaps = 118/671 (17%)
Query: 17 PSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARF 76
P +P ++ LDC+ T+ + ++ ++ I T A+A A + L A
Sbjct: 736 PGKPIRVLKNLRVCLDCYS-------TMKYISRITDRYIPTPLAAAA--AMQSLINRANV 786
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
R++ RN+ F S + Y A+ +Y + R L
Sbjct: 787 YRVY--RNISTHRTFQSSSDT---------------YAKAIDMYARDRAL---------- 819
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
+R G+ +H H++ +G + +L+ Y + GQ+S++ KLFDK
Sbjct: 820 -------------YR---GRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDK 863
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
+ N W L + AR G EE
Sbjct: 864 IP-----------------------------------NTNIRRWIVLTGACARRGFYEEA 888
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
+ F M+K G+ + +L C L+ G+ +H ++K FE ++ +ALI +
Sbjct: 889 LSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYM 948
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE----------- 365
Y K G V+ A +F I +K++V NA+++ YA+ G EA+++ +++
Sbjct: 949 YSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSW 1008
Query: 366 --------------------KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+L + P+V+SW++VI F N E D F++M
Sbjct: 1009 NTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLD 1068
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
+SVTIS LL C A L G+EIHG+ + + + K++ V++ L++MY KCG + E
Sbjct: 1069 QGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISE 1128
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
++F + +++ +TWNS+I GY +G A+ F +M E+ K D + F AVL+ACSH
Sbjct: 1129 AKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSH 1188
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
AG+V G +F M ++RIEP++EHYACMVDLLGRAG L EA D++K MP+EP+ +VWG
Sbjct: 1189 AGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWG 1248
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
LL +CR H N ++AE A +F L E+ GS +LLSN+YA +GRW +AAK++ K +
Sbjct: 1249 ALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRK 1308
Query: 646 LKKVAGQSWIE 656
K G SWIE
Sbjct: 1309 FGKFPGCSWIE 1319
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 185/655 (28%), Positives = 317/655 (48%), Gaps = 82/655 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET-APFDCKSSSLLWNSILRV 106
++ H ++ G + F+ ++ +YA+ G + A V++ D + + L ++ R
Sbjct: 133 RRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYAR- 191
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
NG + A ++++++ +G + +T+ ++ C + + + G+ +H HV++M
Sbjct: 192 ---NGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQE----GKQLHAHVVKMQ 244
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+ + N L+ +Y+K G M ++ +F+ +R +N IS
Sbjct: 245 YLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIIS---------------------- 282
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
WT+ ++ + G ++ + F MMR+ GIE ++VL+ C +
Sbjct: 283 -------------WTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVK 329
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
G++ H VIK G VFV A+I +Y G++
Sbjct: 330 DFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEM----------------------- 366
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
DEA + F Q+ + +SW+A+I + N + E+A++ F +M
Sbjct: 367 --------DEAEKQFKQMGRAASN-------VSWNALIAGYVLNEKIEKAMEAFCRMVKE 411
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
V N T S + C+ +L +IH +++ ++ N+ V + L+ Y +CG LE
Sbjct: 412 DVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENA 471
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
VF QI D+++WNS+I Y NG A+ +MIE G KP F+ VLSACSH+
Sbjct: 472 VQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHS 531
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GLV EG+ F MV+++ I+P+ H +CMVD+LGRAG L+ A D +K + M+P A +W
Sbjct: 532 GLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRP 591
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL +CR + N +AE +A +I L Y+ LSN+YA GRW DA R + K +
Sbjct: 592 LLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEI 651
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
K G SWIEV K++ F S + ++ V E L++L Q+++ G P +L
Sbjct: 652 SKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTVL 706
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 161/365 (44%), Gaps = 43/365 (11%)
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
LS C +G+ H FV+K G FV +LI +Y K G+V A ++ ++ +
Sbjct: 120 LSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDA 179
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
+ N LI++YA G +A +VF Q+ G RP
Sbjct: 180 ATCNCLISAYARNGFFVQAFQVFMQI----GNMGTRP----------------------- 212
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
N T S +L+VC +A+ G+++H HVV++ V N LL +Y
Sbjct: 213 ------------NHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYS 260
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
KCG +EE +VFE + ++++I+W + I+G+ +G + AL F M E+G +P+ F
Sbjct: 261 KCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSI 320
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
VL++C +GR ++++ A ++D+ G + EA K M
Sbjct: 321 VLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTA-IIDMYSGLGEMDEAEKQFKQMGRA 379
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED-AAKV 637
+ W L+ + N + +AM + + + + SNI+ A + A V
Sbjct: 380 ASNVSWNALIAGYVL--NEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTV 437
Query: 638 RISAK 642
+I ++
Sbjct: 438 QIHSR 442
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 179/374 (47%), Gaps = 50/374 (13%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ +L C TI + KQ+H ++ + + +L++Y++ G + +A VFE+
Sbjct: 217 YSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLR 276
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + W + + +G ++ ALK + MR+ G+ + FTF +V+ +C +
Sbjct: 277 ---QRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKD--- 330
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV-RVKNYISWNMMF 209
F G++ H V++ G V + +I MY+ +G+M ++ K F ++ R + +SWN +
Sbjct: 331 -FIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALI 389
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+G+ LN + A+E F RM E + N T++++ + + L T+
Sbjct: 390 AGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQ----------- 438
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
IH +IK E + V ++LI Y + G ++ A +
Sbjct: 439 ------------------------IHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQV 474
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
F++I + ++VSWN++I +Y++ G D +F + ++ G+ +P ++ V+ A +
Sbjct: 475 FTQISDADVVSWNSIIKAYSQNG--DPWKAIFLLRKMIEEGN--KPTSXTFLTVLSACSH 530
Query: 390 NGRGEEALDLFRKM 403
+G +E + F+ M
Sbjct: 531 SGLVQEGQEFFKSM 544
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 219/758 (28%), Positives = 373/758 (49%), Gaps = 123/758 (16%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
+N L C +++ C ++ ++ VH + T + F+ ++++Y +FG + A
Sbjct: 195 DNFTLPC---VIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAV 251
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK--LGVLGDGFTFPLVIRA 141
VF+ P + + + WNS++ + NG++E + L+ + G++ D T VI
Sbjct: 252 KVFDKMP---QRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPL 308
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQG------------------------------NV 171
C G R G + H L++G G NV
Sbjct: 309 CARQGEVRL----GMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDTNEKNV 364
Query: 172 HIVNELIGMYAKMGQMSDSFKLF------DKVRVKNYISWNMM--------------FSG 211
N +IG Y+K +F+L DKV+V N++ G
Sbjct: 365 ISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHG 424
Query: 212 FALNFDCDGALEL----------------FKRMELEGLEPNFVT-WTSLLSSHARCGRLE 254
+AL + EL + G+E V+ W +L+ H + G
Sbjct: 425 YALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPR 484
Query: 255 ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
+ +DL+ +MR G+E IA +LS CA L + GK IHG +++ GFE F+ +L+
Sbjct: 485 KALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLV 544
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
+Y + G + +A+ F +EEK
Sbjct: 545 SLYVQCGKILLAKLFFDNMEEK-------------------------------------- 566
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
N++ W+ +I F+ N +ALD+F +M +K+ + ++I G L C++ +AL +G+E+
Sbjct: 567 -NLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKEL 625
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
H V+ + ++ V L++MY KCGC+E+ +F+++ K +TWN +I+GYG++G G
Sbjct: 626 HCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHG 685
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
A+ F+ M AGF+PD V F+A+L+AC+HAGLV EG M F I+P++EHYAC
Sbjct: 686 RKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYAC 745
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
+VD+LGRAG L EA ++V +P +P++ +W +LL+SCR +++ D+ E +A+++ L +
Sbjct: 746 VVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDK 805
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN-SLQSD 673
+Y+L+SN YA G+W++ K+R K GL+K AG SWIE+ K+ F G+ SL
Sbjct: 806 AENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQS 865
Query: 674 LKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVK 711
+K + + EL ++ G PD +L E+ + +K
Sbjct: 866 MK-IQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIK 902
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 162/634 (25%), Positives = 278/634 (43%), Gaps = 126/634 (19%)
Query: 37 LLQQC---KTIHQLKQVHNQLIVTGAN--ASAFLAARVLSIYARFGRLFDARNVFETAPF 91
LLQ C K I +++HN I T + L R++++Y+ +D+ VF +
Sbjct: 99 LLQLCGEYKNIEIGRKIHN-FISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASR- 156
Query: 92 DCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG-VLGDGFTFPLVIRACKFMGSFRF 150
+ + LWN++L + N L+ +A+ ++V+M L + D FT P VI+AC +G +
Sbjct: 157 --RKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKAC--VGVYDV 212
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
R G+ VH L+ +V + N LI MY K G + + K+FDK+ +N +SWN +
Sbjct: 213 RL--GEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMY 270
Query: 211 GFALNFDCDGALELFKRM--ELEGLEPNFVTW---------------------------- 240
N + + LFK + EGL P+ T
Sbjct: 271 ACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGL 330
Query: 241 -------TSLLSSHARCGRLEETMDLFD---------------------------MMRKR 266
+SLL +++CG L E LFD ++RK
Sbjct: 331 CGELKVNSSLLDMYSKCGYLCEARVLFDTNEKNVISWNSMIGGYSKDRDFRGAFELLRKM 390
Query: 267 GIE----VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF-EDYVFVKNALICVYGKHG 321
+E V + VL VC + K IHG+ ++ GF + V NA + Y K G
Sbjct: 391 QMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCG 450
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
+ A+ +F +E K + SWNALI + + G +A++++ +
Sbjct: 451 SLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMR---------------- 494
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
G G E DLF TI+ LLS CA +L+ G+EIHG ++R
Sbjct: 495 ---------GSGLEP-DLF-------------TIASLLSACARLKSLSCGKEIHGSMLRN 531
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
+ + L+++Y++CG + L F+ +E+K+L+ WN+MI+G+ N +AL F
Sbjct: 532 GFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMF 591
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC-MVDLLG 560
+M+ + PD ++ + L ACS + G+ + V+ E C ++D+
Sbjct: 592 HQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSF--VTCSLIDMYA 649
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+ G ++++ +I + ++ W L+ +H
Sbjct: 650 KCGCMEQSQNIFDRVHLKGEV-TWNVLITGYGIH 682
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 219/736 (29%), Positives = 351/736 (47%), Gaps = 133/736 (18%)
Query: 51 HNQLIVTGANASAFL-----AA-----RVLSIYARFGR--LFDARNVFETAPFDCKSSSL 98
H+ L V A + A L AA ++L+ Y+R L AR VF+ P + +
Sbjct: 3 HHHLAVAAARSHASLLKSGVAAPTPWNQLLTAYSRSSPDGLAAARRVFDEVP---RRDEV 59
Query: 99 LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIV 158
WN++L ++G + A +L M G+ + F +R+ + R + G +
Sbjct: 60 SWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRS----AAVARRPAIGAQL 115
Query: 159 HNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
+ L+ G NV + L+ +YAK G++ D+ ++FD + +N +SWN + +G+ + D
Sbjct: 116 QSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDM 175
Query: 219 DGALELFKRMELEGLEPNFVTWTSLL---------------------------------- 244
ALELF ME EGL P+ T+ SLL
Sbjct: 176 ASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAI 235
Query: 245 SSHARCGRLEETMDLFD---------------------------------MMRKRGIEVG 271
+++++CG L+++ +FD MM++ G+
Sbjct: 236 TAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPD 295
Query: 272 AEAIAVVLSVCADLA-ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD---VKVAQ 327
+ ++S C++ DH G+VIHG VIK E V NALI +Y ++ + ++ A
Sbjct: 296 MYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAY 355
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
F+ + K+ VSWN+++T Y++ GL
Sbjct: 356 KCFNSLVLKDTVSWNSMLTGYSQHGL---------------------------------- 381
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
+AL FR M V + S L +E A L +G++IHG V+ N
Sbjct: 382 -----SADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASND 436
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
V + L+ MY K G +++ FE+ +K + WN+MI GY +G EN F EM++
Sbjct: 437 FVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQR 496
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
D + FV ++++CSHAGLV+EG I + M ++ + +MEHYAC VDL GRAG L +
Sbjct: 497 KAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDK 556
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A ++ +MP EP+A VW TLL +CR+H N ++A +AS +F +Y+LLS++Y+
Sbjct: 557 AKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSG 616
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
G W D A V+ K +GL KV G SWIEVK ++H F++ + + + E+L L LQ
Sbjct: 617 LGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL-LQ 675
Query: 688 MEN--KGCVPDNDIIL 701
+E C D DI++
Sbjct: 676 VEQMLSNC-EDEDILM 690
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 174/398 (43%), Gaps = 86/398 (21%)
Query: 41 CKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLW 100
C +HQL H +++ G+ + ++ Y++ G L D+R +F+ D + + W
Sbjct: 209 CFLMHQL---HGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIG-DIR-DLISW 263
Query: 101 NSILRVNVSNGLYENALKLYVK-MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
N++L NG+ + A+K +V+ M++ GV D ++F +I +C G + G+++H
Sbjct: 264 NAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQ---GRVIH 320
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQ---MSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
V++ +G + N LI MY + + M D++K F+ + +K+ +SWN M +G++ +
Sbjct: 321 GLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHG 380
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
AL+ F RC M + A +
Sbjct: 381 LSADALKFF-----------------------RC------------MCSENVRTDEYAFS 405
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
L ++LA +GK IHG VI GF FV ++LI +Y K G + A+ F E ++
Sbjct: 406 AALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKS 465
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
+ V WNA+I YA+ G Q E +D
Sbjct: 466 SSVPWNAMIFGYAQHG----------QAENVD---------------------------- 487
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
LF +M K + +T GL++ C+ + ++ G EI
Sbjct: 488 -ILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI 524
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 106/223 (47%), Gaps = 10/223 (4%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H +I +G ++ F+++ ++ +Y++ G + DAR FE A KSSS+ WN+++
Sbjct: 421 KQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEAD---KSSSVPWNAMIFGY 477
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+G EN L+ +M + D TF +I +C G +I++ + G
Sbjct: 478 AQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAG---LVDEGSEILNTMETKYGV 534
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELFK 226
+ + +Y + GQ+ + KL D + + + + W + ++ + + A ++
Sbjct: 535 PLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVAS 594
Query: 227 RMELEGLEP-NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+ + EP T+ L S ++ G + + +M+KRG+
Sbjct: 595 HLFVA--EPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGL 635
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 193/599 (32%), Positives = 305/599 (50%), Gaps = 46/599 (7%)
Query: 114 ENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHI 173
E+A+ Y +M G D +TFP +++A + + VH HV+++G N H+
Sbjct: 1 EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60
Query: 174 VNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL 233
+ L+ Y G + + L +CD
Sbjct: 61 ASSLVAAYTAGGDGAAARALVG---------------------ECDTP------------ 87
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD-HMGK 292
V W +L+S H R GR E+ F M + G VLS C D +G
Sbjct: 88 ----VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGM 143
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+HG V+ G + V+NAL+ +Y + D+ A +F ++ +++VSW +L++ A G
Sbjct: 144 QVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLG 203
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
DEA ++F ++ + D +SW+A+I + R EAL++FR+MQ + V A+
Sbjct: 204 QVDEARDLFDRMPERD--------TVSWTAMIDGYVWAARFREALEMFREMQYSNVSADE 255
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
T+ +++ CA+ AL +G + ++ R + + V N L++MY KCG +E VF+
Sbjct: 256 FTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKG 315
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+ +D TW ++I G +NG E A+ F MI PD V F+ VL+AC+HAGLV++G
Sbjct: 316 MHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKG 375
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
R F M+ + I P + HY C++DLLGRAG + EA D + MPM PN+ +WGTLL +CR
Sbjct: 376 REFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACR 435
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
+H N+++ E +A ++ L E + Y+LLSNIYA RWED ++R + KG+KK G
Sbjct: 436 VHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGC 495
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVK 711
S IE+ IH F +G+ K + LE + + N G PD + E+ K+ K
Sbjct: 496 SLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVGYFPDVTEVFVEVAEKEKKK 554
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 189/418 (45%), Gaps = 47/418 (11%)
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ + WN+++ + G + + +V M + G T+ V+ AC G G
Sbjct: 86 TPVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSAC---GKGTRDVLLG 142
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
VH V+ G ++ + N L+ MYA+ M ++K+FD ++V++ +SW + SG A
Sbjct: 143 MQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARL 202
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
D A +LF RM E + V+WT+++ + R E +++F M+ + +
Sbjct: 203 GQVDEARDLFDRMP----ERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTM 258
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
V++ CA L A MG+ + ++ + G + FV NALI +Y K G ++ A ++F +
Sbjct: 259 VSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHH 318
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD-----------------GGSMER---- 374
++ +W A+I A G +EA+E+F ++ ++ G +++
Sbjct: 319 RDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREF 378
Query: 375 -----------PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
PNV+ + +I G+ EALD +M + NS LL+ C
Sbjct: 379 FLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPM---TPNSTIWGTLLAACR 435
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE----GHLVFEQIEKKD 477
IG + ++ + +N +V L N+Y KC E+ H + E+ KK+
Sbjct: 436 VHGNSEIGELVAERLLELD-PENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKE 492
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 113/257 (43%), Gaps = 17/257 (6%)
Query: 21 FSIITYNNSLLDCFD--HLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYAR 75
F + Y+N D F ++ C + L+ V + G AF+ ++ +Y++
Sbjct: 243 FREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSK 302
Query: 76 FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
G + A +VF+ K W +I+ NG E A++++ +M ++ D TF
Sbjct: 303 CGSIERALDVFKGMHHRDK---FTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTF 359
Query: 136 PLVIRACKFMGSF-RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
V+ AC G + R F ++ + NV +I + + G+++++
Sbjct: 360 IGVLTACTHAGLVDKGREFFLSMIEAY----NIAPNVVHYGCIIDLLGRAGKITEALDTI 415
Query: 195 DKVRV-KNYISWNMMFSGFALNFDCD-GALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
D++ + N W + + ++ + + G L + +EL+ N + + L + +A+C R
Sbjct: 416 DQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELD--PENSMVYILLSNIYAKCNR 473
Query: 253 LEETMDLFDMMRKRGIE 269
E+ L + ++GI+
Sbjct: 474 WEDVRRLRHAIMEKGIK 490
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 217/736 (29%), Positives = 348/736 (47%), Gaps = 133/736 (18%)
Query: 51 HNQLIVTGANASAFLAA----------RVLSIYARFGR--LFDARNVFETAPFDCKSSSL 98
H QL V A +A ++L+ Y+R L AR VF+ P + +
Sbjct: 3 HQQLAVAAARFNACFPKSGSCATTPWNQLLTAYSRSSPDGLAAARRVFDEVP---RRDEV 59
Query: 99 LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIV 158
WN++L ++G + A +L M G+ + F +R+ + R + G +
Sbjct: 60 SWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRS----AAVARRPAIGAQL 115
Query: 159 HNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
+ L+ G NV + L+ +YAK G++ D+ ++FD + +N +SWN + +G+ + D
Sbjct: 116 QSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDM 175
Query: 219 DGALELFKRMELEGLEPNFVTWTSLL---------------------------------- 244
ALELF ME EGL P+ T+ SLL
Sbjct: 176 ASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAI 235
Query: 245 SSHARCGRLEETMDLFD---------------------------------MMRKRGIEVG 271
+++++CG L+++ +FD MM++ G+
Sbjct: 236 TAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPD 295
Query: 272 AEAIAVVLSVCADLA-ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD---VKVAQ 327
+ ++S C++ DH G+VIHG VIK E V NALI +Y ++ + ++ A
Sbjct: 296 MYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAY 355
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
F+ + K+ VSWN+++T Y++ GL
Sbjct: 356 KCFNSLVLKDTVSWNSMLTGYSQHGL---------------------------------- 381
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
+AL FR M V + S L +E A L +G++IHG V+ N
Sbjct: 382 -----SADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASND 436
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
V + L+ MY K G +++ FE+ +K + WN+MI GY +G EN F EM++
Sbjct: 437 FVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQR 496
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
D + FV ++++CSHAGLV+EG I + M ++ + +MEHYAC VDL GRAG L +
Sbjct: 497 KAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDK 556
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A ++ +MP EP+A VW TLL +CR+H N ++A +AS +F +Y+LLS++Y+
Sbjct: 557 AKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSG 616
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
G W D A V+ K +GL KV G SWIEVK ++H F++ + + + E+L L LQ
Sbjct: 617 LGMWSDRATVQRVMKKRGLSKVPGWSWIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL-LQ 675
Query: 688 MEN--KGCVPDNDIIL 701
+E C D DI++
Sbjct: 676 VEQMLSNC-EDEDILM 690
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 174/398 (43%), Gaps = 86/398 (21%)
Query: 41 CKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLW 100
C +HQL H +++ G+ + ++ Y++ G L D+R +F+ D + + W
Sbjct: 209 CFLMHQL---HGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIG-DIR-DLISW 263
Query: 101 NSILRVNVSNGLYENALKLYVK-MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
N++L NG+ + A+K +V+ M++ GV D ++F +I +C G + G+++H
Sbjct: 264 NAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQ---GRVIH 320
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQ---MSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
V++ +G + N LI MY + + M D++K F+ + +K+ +SWN M +G++ +
Sbjct: 321 GLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHG 380
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
AL+ F RC M + A +
Sbjct: 381 LSADALKFF-----------------------RC------------MCSENVRTDEYAFS 405
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
L ++LA +GK IHG VI GF FV ++LI +Y K G + A+ F E ++
Sbjct: 406 AALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKS 465
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
+ V WNA+I YA+ G Q E +D
Sbjct: 466 SSVPWNAMIFGYAQHG----------QAENVD---------------------------- 487
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
LF +M K + +T GL++ C+ + ++ G EI
Sbjct: 488 -ILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI 524
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 141/325 (43%), Gaps = 58/325 (17%)
Query: 319 KHGDVKVAQNLFSEIEEKN----IVSWNALITSYAEA---GLCDEAVEVFSQLEKLDGGS 371
+H + VA F+ K+ WN L+T+Y+ + GL A VF ++ + D
Sbjct: 2 RHQQLAVAAARFNACFPKSGSCATTPWNQLLTAYSRSSPDGLA-AARRVFDEVPRRDE-- 58
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
+SW+A++ A A++G EA L R M + +N+ + L A + IG
Sbjct: 59 ------VSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIG 112
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
++ ++ + N+ + LL++Y KCG + + VF+ + +++ ++WN++I+GY +
Sbjct: 113 AQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTES 172
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSAC---------------------------- 523
G +AL F EM G PD F ++L+A
Sbjct: 173 GDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGSALGLTVLN 232
Query: 524 ------SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
S G + + RRIFD + + R + + M+ G+ EA M
Sbjct: 233 AAITAYSQCGSLKDSRRIFD-GIGDIR---DLISWNAMLGAYTHNGMDDEAMKFFVRMMQ 288
Query: 578 E----PNAYVWGTLLNSCRMHKNTD 598
E P+ Y + ++++SC H + D
Sbjct: 289 ESGVHPDMYSFTSIISSCSEHGHDD 313
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 106/223 (47%), Gaps = 10/223 (4%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H +I +G ++ F+++ ++ +Y++ G + DAR FE A KSSS+ WN+++
Sbjct: 421 KQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEAD---KSSSVPWNAMIFGY 477
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+G EN L+ +M + D TF +I +C G +I++ + G
Sbjct: 478 AQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAG---LVDEGSEILNTMETKYGV 534
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELFK 226
+ + +Y + GQ+ + KL D + + + + W + ++ + + A ++
Sbjct: 535 PLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVAS 594
Query: 227 RMELEGLEP-NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+ + EP T+ L S ++ G + + +M+KRG+
Sbjct: 595 HLFVA--EPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGL 635
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 170/511 (33%), Positives = 292/511 (57%), Gaps = 16/511 (3%)
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
GQM + + D++ +++ + +L + A +F R+ PN W +++
Sbjct: 39 GQMLKTGLILDEIPASKLLAFCASPNSGSLAY----ARTVFDRI----FRPNTFMWNTMI 90
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
++ EE + L+ M + A +L C+ ++A + IH +IK GF
Sbjct: 91 RGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGFG 150
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
++ N+L+ VY K GD+K A+ LF ++++++ VSWN++I Y + G + A E+F+
Sbjct: 151 SEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNH- 209
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
M N+ISW+++I G+ +EAL+LF +MQ A + ++V + L CA+
Sbjct: 210 -------MPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACAD 262
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
L+ G+ IH ++ + + + ++ L++MY KCG LEE VF ++E+K + W +M
Sbjct: 263 LGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAM 322
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
ISGY ++G G AL F +M AG +P+ + F +L+ACSHAGLV+E + +F+ M R
Sbjct: 323 ISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHG 382
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
+P +EHY CMVDLLGRAGLL+EA ++++NMP++PNA +WG LLN+C +H N ++ + +
Sbjct: 383 FKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGKQIG 442
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
+ + G Y+ L++I+AA+G W AA+VR K +G+ K+ G S I V H F
Sbjct: 443 KILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGTAHEF 502
Query: 665 SSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
+G+ +K + +LE++ ++ +G P
Sbjct: 503 LAGDESHPQIKEIDHMLEQIVERLREEGYKP 533
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 129/434 (29%), Positives = 220/434 (50%), Gaps = 21/434 (4%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA--RFGRLFDARNVFETAPFDC 93
HLLQ+C + +L+Q+H Q++ TG A+++L+ A G L AR VF+
Sbjct: 23 HLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRI---F 79
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ ++ +WN+++R ++ E AL LY M V + +TFP +++AC M +
Sbjct: 80 RPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEET-- 137
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
Q +H H+++MGF ++ N L+ +Y+K G + + LFD+V ++ +SWN M G+
Sbjct: 138 --QQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYT 195
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ + A E+F M E N ++WTS++S G+ +E ++LF M+ GI++
Sbjct: 196 KCGEIEMAYEIFNHMP----ERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNV 251
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
A+ L CADL GK IH ++ K E + LI +Y K GD++ A +F ++
Sbjct: 252 ALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKM 311
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
EEK + W A+I+ YA G EA+E F K+ +E PN ++++ ++ A + G
Sbjct: 312 EEKGVSVWTAMISGYAIHGRGREALEWFM---KMQTAGVE-PNQMTFTGILTACSHAGLV 367
Query: 394 EEALDLFRKMQLAKVVANSVTISG-LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
EA LF M+ S+ G ++ + + L E+ + + + N +
Sbjct: 368 HEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEEL---IENMPVKPNAAIWGA 424
Query: 453 LLNMYMKCGCLEEG 466
LLN G LE G
Sbjct: 425 LLNACHIHGNLELG 438
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 46/219 (21%)
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK--CGCLEEGH 467
+N+ LL C+ L R+IHG +++ + + + + LL G L
Sbjct: 16 SNAAQTLHLLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYAR 72
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS--- 524
VF++I + + WN+MI GY + E AL + M+ + F +L ACS
Sbjct: 73 TVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMS 132
Query: 525 --------HAGLVNEG------------------------RRIFDMMVREFRIEPQMEHY 552
HA ++ G R +FD + + + +
Sbjct: 133 ALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVS-----W 187
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
M+D + G ++ A +I +MP E N W ++++ C
Sbjct: 188 NSMIDGYTKCGEIEMAYEIFNHMP-ERNIISWTSMISGC 225
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 334 bits (856), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 206/658 (31%), Positives = 328/658 (49%), Gaps = 84/658 (12%)
Query: 50 VHNQLIVT-GANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
VH +++ T + FLA ++++Y++ AR V P + + W S++
Sbjct: 28 VHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTP---ARNVVSWTSLVSGLA 84
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
NG + AL + +MR+ GV + FTFP V +A + S R + G+ +H ++ G
Sbjct: 85 QNGHFSTALFEFFEMRREGVAPNDFTFPCVFKA---VASLRLPVT-GKQIHALAVKCGRI 140
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+V + MY K D+ KLFD++
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIP------------------------------ 170
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E N TW + +S+ GR +E ++ F R+ G + + L+ C+D
Sbjct: 171 -----ERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLL 225
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+G +HG V + GF+ V V N LI YGK ++ ++ +F+E+ KN VS
Sbjct: 226 DLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVS-------- 277
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
W +++ A+ N E+A L+ + + V
Sbjct: 278 -------------------------------WCSLVAAYVQNHEDEKASVLYLRSRKEIV 306
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+ IS +LS CA A L +GR IH H V+ + +NI V + L++MY KCGC+E+
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQ 366
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE--AGFKPDGVAFVAVLSACSHA 526
F+++ +K+L+T NS+I GY G + ALA FE+M G P+ + FV++LSACS A
Sbjct: 367 AFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRA 426
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
G V G +IFD M + IEP EHY+C+VD+LGRAG++++A + +K MP++P VWG
Sbjct: 427 GAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGA 486
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
L N+CRMH + A +F L + +G+++LLSN +AA+GRW +A VR K G+
Sbjct: 487 LQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGI 546
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
KK AG SWI VK ++H F + + K + +L +L +ME G PD + L+++
Sbjct: 547 KKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDL 604
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 162/357 (45%), Gaps = 44/357 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H + G F+ +Y + DAR +F+ P + + WN+ + +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP---ERNLETWNAYISNS 184
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
V++G + A++ +++ R++G + TF + AC S G +H V + GF
Sbjct: 185 VTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNAC----SDGLLLDLGMQMHGLVFRSGF 240
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+V + N LI Y K Q+ S +F ++ +KN +SW + + + N + + A L+ R
Sbjct: 241 DTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLR 300
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
RK +E I+ VLS CA +A
Sbjct: 301 -----------------------------------SRKEIVETSDFMISSVLSACAGMAG 325
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+G+ IH +K E +FV +AL+ +YGK G ++ ++ F E+ EKN+V+ N+LI
Sbjct: 326 LELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGG 385
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
YA G D A+ +F + G PN +++ +++ A + G E + +F M+
Sbjct: 386 YAHQGQVDMALALFEDMAPRGCGPA--PNYMTFVSLLSACSRAGAVENGMKIFDSMK 440
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 179/430 (41%), Gaps = 81/430 (18%)
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKG-GFEDYVFVKNALICVYGKHGDVKVAQNLF 330
A+A+ ++L ++ +G+V+H ++K F+ N LI +Y K + A+ +
Sbjct: 6 ADALGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVL 65
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS- 389
+N+VSW +L++ A+ G A+ F ++ + +G + PN ++ V A AS
Sbjct: 66 RLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRR-EGVA---PNDFTFPCVFKAVASL 121
Query: 390 ---------------NGR------GEEALDLFRKMQLAK-------------------VV 409
GR G A D++ K +L +
Sbjct: 122 RLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYI 181
Query: 410 ANSV-------------------------TISGLLSVCAESAALNIGREIHGHVVRVSMN 444
+NSV T G L+ C++ L++G ++HG V R +
Sbjct: 182 SNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFD 241
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA----LAT 500
++ V NGL++ Y KC + ++F ++ K+ ++W S+++ Y N E A L +
Sbjct: 242 TDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRS 301
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
+E++E +VLSAC+ + GR I V+ +E + + +VD+ G
Sbjct: 302 RKEIVET----SDFMISSVLSACAGMAGLELGRSIHAHAVKAC-VERNIFVGSALVDMYG 356
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML 620
+ G ++++ MP E N +L+ D+A A+ + +YM
Sbjct: 357 KCGCIEDSEQAFDEMP-EKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMT 415
Query: 621 LSNIYAASGR 630
++ +A R
Sbjct: 416 FVSLLSACSR 425
>gi|347954494|gb|AEP33747.1| chloroplast biogenesis 19, partial [Brassica oleracea]
Length = 485
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/447 (40%), Positives = 268/447 (59%), Gaps = 12/447 (2%)
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
V+WTS ++ +R GRL E F MR G+E + +LS CAD + G +HG+
Sbjct: 30 VSWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCAD--CEPFGDSLHGY 87
Query: 298 VIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
K G + + V V A++ +Y K + A+ +F +E+KN V+WN +I Y +G D+
Sbjct: 88 ACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDGYMRSGRVDD 147
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
A +VF ++ + D +ISW+A+I F G EEAL FR+MQ++ V + V +
Sbjct: 148 AAKVFDEMPERD--------LISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDYVAVI 199
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
L+ CA AL+ G +H VV N+ V N L+++Y +CGC+E VF+++EK+
Sbjct: 200 AALAACANLGALSFGLWVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDEMEKR 259
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
+++WNS+I G+ NG +L F M E FKPD V F L+ACSH GLV EG R F
Sbjct: 260 TVVSWNSVIVGFAANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEGVRYF 319
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
+ M R++RI P++EHY C+VDL RAG L+EA +V++MPM+PN V G+LL +CR H N
Sbjct: 320 EAMKRDYRISPRIEHYGCLVDLYSRAGRLEEALKVVESMPMKPNEVVIGSLLAACRTHGN 379
Query: 597 -TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
T++AE M ++ L + +Y++LSN+YAA G+WE A+K+R K GLKK G S I
Sbjct: 380 DTELAERMMKRLSELKVKGHSNYVILSNMYAADGQWEGASKMRRKMKGLGLKKQPGFSSI 439
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLE 682
E+ + H+F +G+S + + EVLE
Sbjct: 440 EIDDRTHVFMAGDSAHVENGYIREVLE 466
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 163/325 (50%), Gaps = 15/325 (4%)
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+++ W S + + NG A K + MR GV + T ++ C F G
Sbjct: 28 TTVSWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCADCEPF------G 81
Query: 156 QIVHNHVLQMGFQGN-VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
+H + ++G N V + ++GMY+K + + +FD+V KN ++WN M G+
Sbjct: 82 DSLHGYACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDGYMR 141
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
+ D A ++F M E + ++WT++++ + G EE + F M+ G++ A
Sbjct: 142 SGRVDDAAKVFDEMP----ERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDYVA 197
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ L+ CA+L A G +H FV+ F++ V V N+LI +Y + G V+ A+ +F E+E
Sbjct: 198 VIAALAACANLGALSFGLWVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDEME 257
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
++ +VSWN++I +A G E++ F ++++ +P+ ++++ + A + G E
Sbjct: 258 KRTVVSWNSVIVGFAANGHAHESLVYFRRMQE----ERFKPDAVTFTGALTACSHVGLVE 313
Query: 395 EALDLFRKMQLAKVVANSVTISGLL 419
E + F M+ ++ + G L
Sbjct: 314 EGVRYFEAMKRDYRISPRIEHYGCL 338
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y R GR+ DA VF+ P + + W +++ V GL+E AL + +M+ GV D
Sbjct: 139 YMRSGRVDDAAKVFDEMP---ERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDY 195
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
+ AC +G+ SFG VH V+ F+ NV + N LI +Y + G + + +
Sbjct: 196 VAVIAALAACANLGAL----SFGLWVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 251
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+FD++ + +SWN + GFA N +L F+RM+ E +P+ VT+T L++ + G
Sbjct: 252 VFDEMEKRTVVSWNSVIVGFAANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGL 311
Query: 253 LEETMDLFDMMRK 265
+EE + F+ M++
Sbjct: 312 VEEGVRYFEAMKR 324
>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 196/577 (33%), Positives = 303/577 (52%), Gaps = 84/577 (14%)
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
TF +I +C S S G VH ++ GF + + +LI MY ++G + + K+
Sbjct: 80 TFEHLICSCAQQNSL----SDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKV 135
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FD+ R + WN +F A+ CG+
Sbjct: 136 FDETRERTIYVWNALFRALAM---------------------------------VGCGK- 161
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVC--ADLAADHM--GKVIHGFVIKGGFEDYVFV 309
E +DL+ M GI VL C ++L+ + GK IH +++ G+E + V
Sbjct: 162 -ELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHV 220
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
L+ VY K G V SYA + C
Sbjct: 221 MTTLLDVYAKFGSV-----------------------SYANSVFC--------------- 242
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA--KVVANSVTISGLLSVCAESAA 427
+M N +SWSA+I FA N +AL+LF+ M L V NSVT+ +L CA AA
Sbjct: 243 -AMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAA 301
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L G+ IHG+++R ++ + V N L+ MY +CG + G VF+ ++ +D+++WNS+IS
Sbjct: 302 LEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISI 361
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
YGM+G G+ A+ FE MI G P ++F+ VL ACSHAGLV EG+ +F+ M+ ++RI P
Sbjct: 362 YGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHP 421
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
MEHYACMVDLLGRA L EA ++++M EP VWG+LL SCR+H N ++AE ++ +
Sbjct: 422 GMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLL 481
Query: 608 FGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG 667
F L G+Y+LL++IYA + W +A V + +GL+K+ G SWIEVKRK++ F S
Sbjct: 482 FELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSV 541
Query: 668 NSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ ++ + +L +L+ +M+ +G VP +++L+++
Sbjct: 542 DEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDL 578
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 194/375 (51%), Gaps = 47/375 (12%)
Query: 34 FDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F+HL+ C + L VH +L+ +G + FLA +++++Y G + AR VF+
Sbjct: 81 FEHLICSCAQQNSLSDGLDVHRRLVSSGFDQDPFLATKLINMYYELGSIDRARKVFDETR 140
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + +WN++ R G + L LYV+M +G+ D FT+ V++AC
Sbjct: 141 ---ERTIYVWNALFRALAMVGCGKELLDLYVQMNWIGIPSDRFTYTFVLKACVVSELSVS 197
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H H+L+ G++ N+H++ L+ +YAK G +S + +F + KN++SW+ M +
Sbjct: 198 PLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIA 257
Query: 211 GFALNFDCDGALELFKRMELEGLE--PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
FA N ALELF+ M LE + PN VT ++L +
Sbjct: 258 CFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQA---------------------- 295
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
CA LAA GK+IHG++++ G + + V NALI +YG+ G++ + Q
Sbjct: 296 -------------CAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQR 342
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+F ++ +++VSWN+LI+ Y G +A+++F + + GS P+ IS+ V+GA +
Sbjct: 343 VFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIFENM--IHQGS--SPSYISFITVLGACS 398
Query: 389 SNGRGEEALDLFRKM 403
G EE LF M
Sbjct: 399 HAGLVEEGKILFESM 413
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 168/335 (50%), Gaps = 21/335 (6%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K++H ++ G A+ + +L +YA+FG + A +VF P + + W++++
Sbjct: 203 KEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMP---TKNFVSWSAMIACF 259
Query: 108 VSNGLYENALKLY--VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
N + AL+L+ + + + + T V++AC + + G+++H ++L+
Sbjct: 260 AKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQ----GKLIHGYILRR 315
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
G + ++N LI MY + G++ ++FD ++ ++ +SWN + S + ++ A+++F
Sbjct: 316 GLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGFGKKAIQIF 375
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCAD 284
+ M +G P+++++ ++L + + G +EE LF+ M+ K I G E A ++ +
Sbjct: 376 ENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG- 434
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ---NLFSEIEEKNIVSW 341
A+ + + I + FE V +L+ H +V++A+ L E+E +N ++
Sbjct: 435 -RANRLDEAI-KLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPRNAGNY 492
Query: 342 NALITSYAEAGLCDEAVEVFSQLE-----KLDGGS 371
L YAEA + EA V LE KL G S
Sbjct: 493 VLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCS 527
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 200/718 (27%), Positives = 355/718 (49%), Gaps = 94/718 (13%)
Query: 14 PSNPSRPFSIITYNNSLLDCF--DHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAAR 68
P++ ++ ++ + ++ +D F +L+ C I ++VH ++ G + F+
Sbjct: 105 PADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNA 164
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++ +Y+ G L AR +F+ + W++++R +GL + AL L M + V
Sbjct: 165 LIMMYSEVGSLALARLLFDKIE---NKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRV 221
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN--VHIVNELIGMYAKMGQ 186
+ + + G+ +H +V++ G G V + LI MY K
Sbjct: 222 KPSEIGMISITHVLAELADLKL----GKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCEN 277
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
++ + ++FD + + + ++WT+++++
Sbjct: 278 LAYARRVFDGLS-----------------------------------KASIISWTAMIAA 302
Query: 247 HARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY 306
+ C L E + LF M G+ + ++ C A +GK++H F ++ GF
Sbjct: 303 YIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLS 362
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
+ + A I +YGK GDV+ A+++F + K++
Sbjct: 363 LVLATAFIDMYGKCGDVRSARSVFDSFKSKDL---------------------------- 394
Query: 367 LDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
+ WSA+I ++A N +EA D+F M + N T+ LL +CA++
Sbjct: 395 -----------MMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAG 443
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
+L +G+ IH ++ + + +++++ ++MY CG ++ H +F + +D+ WN+MIS
Sbjct: 444 SLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMIS 503
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
G+ M+G GE AL FEEM G P+ + F+ L ACSH+GL+ EG+R+F MV EF
Sbjct: 504 GFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFT 563
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
P++EHY CMVDLLGRAGLL EA +++K+MPM PN V+G+ L +C++HKN + E A Q
Sbjct: 564 PKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQ 623
Query: 607 IFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSS 666
L +G +L+SNIYA++ RW D A +R + K +G+ K G S IEV +H F
Sbjct: 624 FLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIM 683
Query: 667 GNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSK 724
G+ D K V E+++E+ ++E+ G PD +L N+ + +++ A N S+
Sbjct: 684 GDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVL------HNIDKEKKVSALNYHSE 735
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 170/365 (46%), Gaps = 47/365 (12%)
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
LE N + L++S+ + + ++ MR EV I VL C + +
Sbjct: 82 LESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFL 141
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+G+ +HGFV+K GF VFV NALI +Y + G + +A+ LF +IE K++VSW+ +I SY
Sbjct: 142 LGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYD 201
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+GL D EALDL R M + +V
Sbjct: 202 RSGLLD---------------------------------------EALDLLRDMHVMRVK 222
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSM--NKNILVQNGLLNMYMKCGCLEEGH 467
+ + + + V AE A L +G+ +H +V+R + + L++MY+KC L
Sbjct: 223 PSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYAR 282
Query: 468 LVFEQIEKKDLITWNSMISGY-GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
VF+ + K +I+W +MI+ Y N L E + F +M+ G P+ + ++++ C A
Sbjct: 283 RVFDGLSKASIISWTAMIAAYIHCNNLNE-GVRLFVKMLGEGMFPNEITMLSLVKECGTA 341
Query: 527 GLVNEGRRIFDMMVRE-FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
G + G+ + +R F + + +D+ G+ G ++ A + + + + +W
Sbjct: 342 GALELGKLLHAFTLRNGFTLSLVLA--TAFIDMYGKCGDVRSARSVFDSFKSK-DLMMWS 398
Query: 586 TLLNS 590
+++S
Sbjct: 399 AMISS 403
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 193/645 (29%), Positives = 319/645 (49%), Gaps = 83/645 (12%)
Query: 58 GANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENAL 117
G + F+ + ++S +FG++ +A+ VF+ P + WNSI+ V G ++ A
Sbjct: 160 GMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMP---NKDVVCWNSIIGGYVQAGCFDVAF 216
Query: 118 KLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNEL 177
+L+ +M G+ T +I+AC +G+ + G+ +H +VL +G ++ ++
Sbjct: 217 QLFFEMHGSGIKPSPITMTSLIQACGGIGNLKL----GKCMHGYVLGLGLGNDILVLTSF 272
Query: 178 IGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNF 237
+ MY+KMG + + +F K+ +N
Sbjct: 273 VDMYSKMGDIESARWVFYKMPTRN-----------------------------------L 297
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
V+W +++S R G + E+ DLF + + I +L C+ A+ GK++HG
Sbjct: 298 VSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGC 357
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
I+ E N++ A++ Y++ G +A
Sbjct: 358 AIRS--------------------------------FESNLILSTAIVDLYSKCGSLKQA 385
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
VF++ M+ NVI+W+A++ A NG E+AL LF +MQ + ANSVT
Sbjct: 386 TFVFNR--------MKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVS 437
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE-KK 476
L+ CA +L GR IHGH+ R+ +I+ L++MY KCG + +F K
Sbjct: 438 LVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISK 497
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D++ WNSMI+GYGM+G G A+ + +MIE G KP+ F+++LSACSH+ LV +G +F
Sbjct: 498 DVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLF 557
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
+ M R+ I P +HYAC+VDLL RAG +EA +++ MP +P V LL+ CR HKN
Sbjct: 558 NSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKN 617
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
++ + ++ L G Y++LSNIYA + RW+ +R + +GLKK G S +E
Sbjct: 618 INLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVE 677
Query: 657 VKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+H F +G++ + + + LE L +E G VPD +L
Sbjct: 678 TGNWVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDTSCVL 722
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 196/654 (29%), Positives = 333/654 (50%), Gaps = 87/654 (13%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+QVH I T + F+ + +++ Y + G +F+AR +F+ P + + + W +++
Sbjct: 132 RQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMP---ERNLVSWTTMISGY 188
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC---KFMGSFRFRFSFGQIVHNHVLQ 164
S + + AL ++ MR + + F F V+ A +F+ S G+ VH V++
Sbjct: 189 ASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDS-------GKQVHCVVVK 241
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
G V ++N L+ MYAK G ++ S LF+ KN I
Sbjct: 242 NGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAI--------------------- 280
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
TW++L++ +++ G + + LF M G + VL C+D
Sbjct: 281 --------------TWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSD 326
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
+AA GK HG+++K G+E ++ AL+
Sbjct: 327 VAAIEEGKQTHGYLLKSGYETQIYTATALV------------------------------ 356
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
YA+ G +A + F L + P+++ W+++I + NG+ EEAL ++ +MQ
Sbjct: 357 -DMYAKFGFTGDARKGFDFLLE--------PDLVLWTSIIAGYVQNGKNEEALSMYGRMQ 407
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
+ K++ N +T++ +L C+ AAL G++IH ++ + + +++ L MY KCG LE
Sbjct: 408 MRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLE 467
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
EG L+F ++ ++D+++WN+MISG NG G AL FEEM G KPD + FV VLSACS
Sbjct: 468 EGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACS 527
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
H G+V G F+MM EF + P++EHYACMVD+L RAG L EA + +++ ++ +W
Sbjct: 528 HMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLW 587
Query: 585 GTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTK 644
LL +CR H N ++ ++ L + + +Y+LLS+IY A GR D +VR K +
Sbjct: 588 RILLPACRNHCNYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVR 647
Query: 645 GLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
G++K G SWIE+K +H+F G+ + ++ + + L M++ G P ++
Sbjct: 648 GVRKETGCSWIELKSHVHVFVVGDQIHPQIEEIQGAIWRLRKHMKDDGYRPGHE 701
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 196/437 (44%), Gaps = 78/437 (17%)
Query: 155 GQIVHNHVLQMGFQGNV-HIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
GQI+H H++++ + + ++ N LI YAK G + + +F+ ++ KN +S+N + G +
Sbjct: 26 GQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLS 85
Query: 214 LNFD--CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
N + LELF+RM + P+ T+ + ++ A
Sbjct: 86 HNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAA----------------------- 122
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
+L + + +H IK D VFV ++L+ Y K G V A+ LF
Sbjct: 123 -----------LNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFD 171
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+ E+N+VSW +I+ YA + EA+ VF + ++G N +++V+ A
Sbjct: 172 RMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEG----NLNEFVFTSVLSAL---- 223
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
VC E ++ G+++H VV+ + + + V N
Sbjct: 224 -----------------------------VCPE--FVDSGKQVHCVVVKNGVLEFVSVLN 252
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L+ MY KCG L ++FE K+ ITW+++I+GY G AL F +M AGF P
Sbjct: 253 ALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVP 312
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
V VL ACS + EG++ +++ E Q+ +VD+ + G +A
Sbjct: 313 SEFTLVGVLKACSDVAAIEEGKQTHGYLLKS-GYETQIYTATALVDMYAKFGFTGDARKG 371
Query: 572 VKNMPMEPNAYVWGTLL 588
+ +EP+ +W +++
Sbjct: 372 F-DFLLEPDLVLWTSII 387
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 120/230 (52%), Gaps = 10/230 (4%)
Query: 37 LLQQCK---TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L+ C I + KQ H L+ +G + A ++ +YA+FG DAR F+ F
Sbjct: 320 VLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFD---FLL 376
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ +LW SI+ V NG E AL +Y +M+ +L + T V++AC + +
Sbjct: 377 EPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQ--- 433
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H ++ G + I + L MYAK G + + +F ++ ++ +SWN M SG +
Sbjct: 434 -GKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLS 492
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
N ALELF+ M LEG +P+ +T+ ++LS+ + G ++ F+MM
Sbjct: 493 QNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMM 542
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/535 (33%), Positives = 302/535 (56%), Gaps = 23/535 (4%)
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
NV ++ Y K Q+ ++ +LF ++ ++N +SWN M G+A N AL+LF+RM
Sbjct: 63 NVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMP 122
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
E N V+W +++++ +CGR+E+ LFD M+ R + +V + + +
Sbjct: 123 ----ERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDV---VSWTTMVAGLAKNGRVED 175
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+ ++ V NA+I Y ++ + A LF + E+++ SWN +IT +
Sbjct: 176 ARALFDQMPVRN-----VVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFI 230
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM-QLAKV 408
+ G + A ++F G M+ NVI+W+A++ + +G EEAL +F KM ++
Sbjct: 231 QNGELNRAEKLF--------GEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNEL 282
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
N+ T +L C++ A L G++IH + + + V + L+NMY KCG L
Sbjct: 283 KPNTGTFVTVLGACSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARK 342
Query: 469 VFEQ--IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
+F+ + ++DLI+WN MI+ Y +G G+ A+ F EM E G + V FV +L+ACSH
Sbjct: 343 MFDDGLLSQRDLISWNGMIAAYAHHGYGKEAINLFNEMQELGVCANDVTFVGLLTACSHT 402
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GLV EG + FD +++ I+ + +HYAC+VDL GRAG L+EAS+I++ + E VWG
Sbjct: 403 GLVEEGFKYFDEILKNRSIQLREDHYACLVDLCGRAGRLKEASNIIEGLGEEVPLTVWGA 462
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL C +H N D+ + +A +I + + G+Y LLSN+YA+ G+W++AA VR+ K GL
Sbjct: 463 LLAGCNVHGNADIGKLVAEKILKIEPQNAGTYSLLSNMYASVGKWKEAANVRMRMKDMGL 522
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
KK G SWIEV + +F G+ S + + +L +L +M+ G +PD+D+++
Sbjct: 523 KKQPGCSWIEVGNTVQVFVVGDKPHSQYEPLGHLLHDLHTKMKKAGDMPDDDLLV 577
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 220/484 (45%), Gaps = 94/484 (19%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y +F ++ +A +F P + + WN+++ NGL + AL L+ +M + V+
Sbjct: 74 YIKFNQVKEAERLFYEMPL---RNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWN 130
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
+++ + + R F Q+ V+ ++ AK G++ D+
Sbjct: 131 TIITALVQCGRIEDAQRL---FDQMKDRDVVSW---------TTMVAGLAKNGRVEDARA 178
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM-------------------EL--- 230
LFD++ V+N +SWN M +G+A N D AL+LF+RM EL
Sbjct: 179 LFDQMPVRNVVSWNAMITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRA 238
Query: 231 -----EGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCAD 284
E E N +TWT++++ + + G EE + +F M+ ++ VL C+D
Sbjct: 239 EKLFGEMQEKNVITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSD 298
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE--IEEKNIVSWN 342
LA G+ IH + K F+D V +ALI +Y K G++ A+ +F + + +++++SWN
Sbjct: 299 LAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWN 358
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
+I +YA G EA+ +F+++++L
Sbjct: 359 GMIAAYAHHGYGKEAINLFNEMQELG---------------------------------- 384
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG----LLNMYM 458
V AN VT GLL+ C+ + + G + +++ N++I ++ L+++
Sbjct: 385 -----VCANDVTFVGLLTACSHTGLVEEGFKYFDEILK---NRSIQLREDHYACLVDLCG 436
Query: 459 KCGCLEEGHLVFEQI-EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
+ G L+E + E + E+ L W ++++G ++G + E++++ +P
Sbjct: 437 RAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKILK--IEPQNAGTY 494
Query: 518 AVLS 521
++LS
Sbjct: 495 SLLS 498
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 136/284 (47%), Gaps = 25/284 (8%)
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
N I + G++ A+ +F E+ E++I W +IT Y + G+ EA ++F + +
Sbjct: 5 NLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDA---- 60
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
+ NV++W+A++ + + +EA LF +M L VV+ + + G AL++
Sbjct: 61 ---KKNVVTWTAMVNGYIKFNQVKEAERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDL 117
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
R + +N++ N ++ ++CG +E+ +F+Q++ +D+++W +M++G
Sbjct: 118 FRRMP--------ERNVVSWNTIITALVQCGRIEDAQRLFDQMKDRDVVSWTTMVAGLAK 169
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
NG E+A A F++M V++ A+++ + ++E ++F M E M
Sbjct: 170 NGRVEDARALFDQMPVRNV----VSWNAMITGYAQNRRLDEALQLFQRMP-----ERDMP 220
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+ M+ + G L A + M E N W ++ H
Sbjct: 221 SWNTMITGFIQNGELNRAEKLFGEM-QEKNVITWTAMMTGYVQH 263
Score = 94.0 bits (232), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 144/295 (48%), Gaps = 21/295 (7%)
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF-TFPLVIRACKFMGSFRFRFSFGQ 156
+ W +++ V +GL E AL++++KM L TF V+ AC + + GQ
Sbjct: 251 ITWTAMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGL----TEGQ 306
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK--VRVKNYISWNMMFSGFAL 214
+H + + FQ + +V+ LI MY+K G++ + K+FD + ++ ISWN M + +A
Sbjct: 307 QIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAAYAH 366
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAE 273
+ A+ LF M+ G+ N VT+ LL++ + G +EE FD +++ R I++ +
Sbjct: 367 HGYGKEAINLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQLRED 426
Query: 274 AIAVVLSVCADLAA-DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
A ++ +C +I G G E + V AL+ HG+ + + L +E
Sbjct: 427 HYACLVDLCGRAGRLKEASNIIEGL----GEEVPLTVWGALLAGCNVHGNADIGK-LVAE 481
Query: 333 ----IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
IE +N +++ L YA G EA V +++ D G ++P SW V
Sbjct: 482 KILKIEPQNAGTYSLLSNMYASVGKWKEAANVRMRMK--DMGLKKQPGC-SWIEV 533
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 200/604 (33%), Positives = 328/604 (54%), Gaps = 46/604 (7%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S YAR G L AR+V + P D + +N+++ NG +++A+KL +M +
Sbjct: 117 MVSCYARGGDLELARDVLDRMPGD--KCTACYNAMISGYAKNGRFDDAMKLLREMPAPDL 174
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN----HVLQMGF--QGNVHIVNE------ 176
+ + ++ + + + +F F ++V + +++ GF G+++ +
Sbjct: 175 VSWNSALAGLTQSGEMVRAVQF---FDEMVKDMTSWNLMLAGFVRTGDLNAASSFFAKIE 231
Query: 177 ---------LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
L+ Y + G+++D+ LFD++ +N ++WN+M G+ + A +LF
Sbjct: 232 SPNVISWVTLLNGYCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDE 291
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M ++ N ++WT+++S AR G+L+E DL D M A A++ A
Sbjct: 292 MPIK----NSISWTTIISGLARAGKLQEAKDLLDKM---SFNCVAAKTALMHGYLQRNMA 344
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
D ++ G + D V N +I Y + G ++ A LF + K++VSWN +I
Sbjct: 345 DDARRIFDGMEV----HDTV-CWNTMISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAG 399
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
YA+ G +A+ +F + M R N +SW++VI F N R +AL F M+
Sbjct: 400 YAQDGQMHKAIGIFRR--------MNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGT 451
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
A+ T + L CA A L++GR++H +VR + N L++ Y KCG + E
Sbjct: 452 NRADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAK 511
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
+F+++ KD+++WN++I GY NG G A+A F EM G +PD V FV +LSACSHAG
Sbjct: 512 QIFDEMVYKDIVSWNALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAG 571
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
L++EG F M +E+ ++P EHYACMVDLLGRAG L EA ++V+ M ++PNA VWG L
Sbjct: 572 LIDEGLFFFYSMTKEYLLKPVAEHYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGAL 631
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
L +C MHKN ++A+ A ++ L +Y+LLSNI A +G+W+++ K R S K KG+
Sbjct: 632 LGACHMHKNHELAQLAAERLSELEPRKASNYVLLSNISAEAGKWDESEKARASIKEKGVN 691
Query: 648 KVAG 651
K G
Sbjct: 692 KPPG 695
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 203/487 (41%), Gaps = 98/487 (20%)
Query: 155 GQIVHNHVLQMGFQG-NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW-------- 205
G+I L G G N N +I + G+++D+ LFD++ V++ SW
Sbjct: 63 GRIDEARALFDGMPGRNTVSWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYA 122
Query: 206 ------------------------NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
N M SG+A N D A++L + M P+ V+W
Sbjct: 123 RGGDLELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAMKLLREMP----APDLVSWN 178
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
S L+ + G + + FD M K V + + A+ K+ VI
Sbjct: 179 SALAGLTQSGEMVRAVQFFDEMVKDMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVIS- 237
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
+V + N Y + G + A++LF + E+N+V+WN ++ Y +EA ++F
Sbjct: 238 ----WVTLLNG----YCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLF 289
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
+ M N ISW+ +I A G+ +EA DL KM V A + + G L
Sbjct: 290 DE--------MPIKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQR 341
Query: 422 CAESAALNI--GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
A I G E+H + + N +++ Y++CG LEE L+F+++ KD++
Sbjct: 342 NMADDARRIFDGMEVH----------DTVCWNTMISGYVQCGILEEAMLLFQRMPNKDMV 391
Query: 480 TWNSMISGYGMNGLGENALATFEEM----------IEAGF-------------------- 509
+WN+MI+GY +G A+ F M + +GF
Sbjct: 392 SWNTMIAGYAQDGQMHKAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGT 451
Query: 510 -KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+ D + + L AC++ +++ GR++ +++VR I A ++ + G + EA
Sbjct: 452 NRADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNA-LISTYAKCGRILEA 510
Query: 569 SDIVKNM 575
I M
Sbjct: 511 KQIFDEM 517
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 144/308 (46%), Gaps = 47/308 (15%)
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
F N + + G + A+ LF + +N V++NA++++ A G DEA +F
Sbjct: 19 FRSNKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALF------ 72
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
DG M N +SW+A+I A + +GR +A LF +M V + + + ++S A
Sbjct: 73 DG--MPGRNTVSWNAMIAALSDHGRVADARSLFDRMP----VRDEFSWTVMVSCYARGGD 126
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L + R++ + R+ +K N +++ Y K G ++ + ++ DL++WNS ++G
Sbjct: 127 LELARDV---LDRMPGDKCTACYNAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAG 183
Query: 488 YGMNGLGENALATFEEMIE---------AGF-----------------KPDGVAFVAVLS 521
+G A+ F+EM++ AGF P+ +++V +L+
Sbjct: 184 LTQSGEMVRAVQFFDEMVKDMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLN 243
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
AG + + R +FD M E + + M+D ++EA + MP++ N+
Sbjct: 244 GYCRAGRIADARDLFDRMP-----ERNVVAWNVMLDGYVHLSPIEEACKLFDEMPIK-NS 297
Query: 582 YVWGTLLN 589
W T+++
Sbjct: 298 ISWTTIIS 305
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 132/294 (44%), Gaps = 52/294 (17%)
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD-- 368
NA++ +HG + A+ LF + +N VSWNA+I + ++ G +A +F ++ D
Sbjct: 53 NAMLSALARHGRIDEARALFDGMPGRNTVSWNAMIAALSDHGRVADARSLFDRMPVRDEF 112
Query: 369 -----------GGSMERPNVI-----------SWSAVIGAFASNGRGEEALDLFRKMQLA 406
GG +E + ++A+I +A NGR ++A+ L R+M
Sbjct: 113 SWTVMVSCYARGGDLELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAMKLLREMPAP 172
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRV-----SMNKNILVQNGLLNMYMKCG 461
+V+ + ++GL G +VR M K++ N +L +++ G
Sbjct: 173 DLVSWNSALAGLTQ--------------SGEMVRAVQFFDEMVKDMTSWNLMLAGFVRTG 218
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
L F +IE ++I+W ++++GY G +A F+ M E VA+ +L
Sbjct: 219 DLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADARDLFDRMPERNV----VAWNVMLD 274
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
H + E ++FD M + I + ++ L RAG LQEA D++ M
Sbjct: 275 GYVHLSPIEEACKLFDEMPIKNSIS-----WTTIISGLARAGKLQEAKDLLDKM 323
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 115/247 (46%), Gaps = 17/247 (6%)
Query: 25 TYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
TY + L C +H +Q+HN L+ +G +F ++S YA+ GR+ +A+
Sbjct: 458 TYASCLRAC-----ANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQ 512
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
+F+ + + WN+++ SNG A+ ++ +M GV D TF ++ AC
Sbjct: 513 IFDEMVY---KDIVSWNALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSH 569
Query: 145 MGSF-RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NY 202
G F F + ++L+ + +V +L+G + G+++++F+L ++++ N
Sbjct: 570 AGLIDEGLFFFYSMTKEYLLKPVAEHYACMV-DLLG---RAGKLNEAFELVQGMQIQPNA 625
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFD 261
W + A + + L L LEP + LLS+ A G+ +E+
Sbjct: 626 GVWGALLG--ACHMHKNHELAQLAAERLSELEPRKASNYVLLSNISAEAGKWDESEKARA 683
Query: 262 MMRKRGI 268
++++G+
Sbjct: 684 SIKEKGV 690
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 201/647 (31%), Positives = 327/647 (50%), Gaps = 81/647 (12%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
+VH LI G ++ F A +L +YA+ G A VF P K + WN+++ V
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIP---KPDIVSWNAVIAGCV 265
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+ + ALKL KM V FT ++AC +G + G+ +H+ +++M +
Sbjct: 266 LHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKL----GRQLHSALMKMDME 321
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+ + LI MY+K G + D+ +FD + K+ I WN
Sbjct: 322 PDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWN---------------------- 359
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
S++S ++ CG E M LF M K G+E ++ +L A A+
Sbjct: 360 -------------SIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQAN 406
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+ +H IK G++ +V N+L+ SY
Sbjct: 407 GFCEQVHTISIKSGYQYDGYVANSLL-------------------------------DSY 435
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+ L ++A +VF D +++++++I A++ G GEEAL ++ +MQ +
Sbjct: 436 GKCCLLEDAAKVFEVCPAED--------LVAYTSMITAYSQYGLGEEALKMYLRMQDRDI 487
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
++ S L + CA +A G++IH HV++ + ++ N L+NMY KCG +++
Sbjct: 488 KPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASC 547
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
+F +I + +++W++MI G +G G AL F +M++ G P+ + V+VLSAC+HAGL
Sbjct: 548 IFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGL 607
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
V E RR F +M + F I P EHYACMVD+LGR G L EA +VK MP + +A VWG LL
Sbjct: 608 VTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALL 667
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
+ R+HKN ++ A + L E +G+++LL+NIYA++G W++ AKVR S K +KK
Sbjct: 668 GAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKK 727
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
G SWIE+K K++ F G+ K + L++L ++ + G VP
Sbjct: 728 EPGMSWIELKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVP 774
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/503 (24%), Positives = 226/503 (44%), Gaps = 90/503 (17%)
Query: 178 IGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNF 237
+ +Y+K + KL + +SW+ + SG+ N + AL + M L G + N
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 238 VTWTSLLSSHARCGRLE-----ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
T++S+L + LE + L M GI +++ VL+ CA L ++ G
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+HG++IK G++ F S NAL+ YA++G
Sbjct: 209 KVHGYLIKLGYDSDPF-------------------------------SANALLDMYAKSG 237
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+ A+ VF ++ K P+++SW+AVI + + + AL L KM +V +
Sbjct: 238 CPEAAIAVFYEIPK--------PDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSM 289
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
T+S L CA + +GR++H ++++ M + V GL++MY KCG L++ +VF+
Sbjct: 290 FTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDL 349
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEM---------------------------- 504
+ KD+I WNS+ISGY G A++ F M
Sbjct: 350 MPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFC 409
Query: 505 -------IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
I++G++ DG ++L + L+ + ++F++ E + Y M+
Sbjct: 410 EQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAE-----DLVAYTSMIT 464
Query: 558 LLGRAGLLQEASDI---VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF--GLIT 612
+ GL +EA + +++ ++P+A+++ +L N+C + + + + GL++
Sbjct: 465 AYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLS 524
Query: 613 ETTGSYMLLSNIYAASGRWEDAA 635
+ L+ N+YA G +DA+
Sbjct: 525 DVFAGNSLV-NMYAKCGSIDDAS 546
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 149/319 (46%), Gaps = 18/319 (5%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+QVH I +G ++A +L Y + L DA VFE P + + + S++
Sbjct: 410 EQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAE---DLVAYTSMITAY 466
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
GL E ALK+Y++M+ + D F F + AC + ++ G+ +H HVL+ G
Sbjct: 467 SQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQ----GKQIHVHVLKCGL 522
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+V N L+ MYAK G + D+ +F+++ + +SW+ M G A + AL+LF +
Sbjct: 523 LSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQ 582
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCADLA 286
M G+ PN +T S+LS+ G + E F +M K GI E A ++ +
Sbjct: 583 MLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILG--- 639
Query: 287 ADHMGKVIHGFVI--KGGFEDYVFVKNALICVYGKHGDVKV---AQNLFSEIEEKNIVSW 341
+G++ V+ + F+ V AL+ H ++++ A + +E + +
Sbjct: 640 --RVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTH 697
Query: 342 NALITSYAEAGLCDEAVEV 360
L YA G+ D +V
Sbjct: 698 ILLANIYASTGMWDNVAKV 716
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 120/297 (40%), Gaps = 75/297 (25%)
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
+N+Y KC C + + DL++W+++ISGY NG GE AL T+ EM G K +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMV-----------REFRIEPQM--------EHYA- 553
F +VL CS + G++I + + EF + + E+Y
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 554 -------------------CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
++D+ ++G + A + +P +P+ W ++ C +H
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIP-KPDIVSWNAVIAGCVLH 267
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
+ D+A + ++ GSY + +++ S LK A
Sbjct: 268 EKNDLALKLLGKM--------GSYRVAPSMFTLS---------------SALKACAAIGL 304
Query: 655 IEVKRKIH-----MFSSGNSLQS----DLKNVCEVLEELALQMENKGCVPDNDIILW 702
+++ R++H M +S D+ + C +L++ + + +P D+I+W
Sbjct: 305 VKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFD---LMPXKDVIVW 358
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 189/585 (32%), Positives = 316/585 (54%), Gaps = 74/585 (12%)
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+ F + +H ++ G ++ I L+ +YA +G +S S FD++ K+ +WN M S
Sbjct: 31 KTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMIS 90
Query: 211 GFALNFDCDGALELFKRMEL-EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+ N A+ F ++ L + P+F T+ +L + CG L +
Sbjct: 91 AYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKA---CGTLVD-------------- 133
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
G+ IH + K GF+ VFV +LI +Y + G +A++L
Sbjct: 134 ---------------------GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSL 172
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM----------------- 372
F ++ +++ SWNA+I+ + G +A++V ++ +L+G M
Sbjct: 173 FDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEM-RLEGIKMNFVTVVSILPVFVDMYA 231
Query: 373 ---------------ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK-VVANSVTIS 416
+VISW+ +I +A NG EA+++++ M+ K ++ N T
Sbjct: 232 KLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWV 291
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
+L A AL G +IHG V++ +++ ++ V L+++Y KCG L + +F Q+ ++
Sbjct: 292 SILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE 351
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
+TWN++IS +G++G E L F EM++ G KPD V FV++LSACSH+G V EG+ F
Sbjct: 352 SSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF 411
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
+M +E+ I+P ++HY CMVDLLGRAG L+ A D +K+MP++P+A +WG LL +CR+H N
Sbjct: 412 RLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGN 470
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
++ + + ++F + ++ G Y+LLSNIYA G+WE KVR A+ +GLKK G S IE
Sbjct: 471 IELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIE 530
Query: 657 VKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
V RK+ +F +GN K + E L L +M++ G +PD +L
Sbjct: 531 VNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVL 575
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 195/408 (47%), Gaps = 51/408 (12%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F+ L K +H L+V G S F++ R++++YA G + +R F+ P
Sbjct: 22 FNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP--- 78
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG-VLGDGFTFPLVIRACKFMGSFRFRF 152
+ WNS++ V NG + A+ + ++ + + D +TFP V++AC +
Sbjct: 79 QKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD----- 133
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H ++GFQ NV + LI MY++ G + LFD + ++ SWN M SG
Sbjct: 134 --GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGL 191
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVT--------------------------------- 239
N + AL++ M LEG++ NFVT
Sbjct: 192 IQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDV 251
Query: 240 --WTSLLSSHARCGRLEETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
W +L++ +A+ G E ++++ MM + + I +L A + A G IHG
Sbjct: 252 ISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHG 311
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
VIK VFV LI VYGK G + A +LF ++ +++ V+WNA+I+ + G ++
Sbjct: 312 RVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEK 371
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+++F ++ LD G +P+ +++ +++ A + +G EE FR MQ
Sbjct: 372 TLKLFGEM--LDEGV--KPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ 415
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 174/482 (36%), Positives = 272/482 (56%), Gaps = 32/482 (6%)
Query: 255 ETMDLFDMMRKRGIEVGAE--AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
+ + LF MR RG + + L C+ +G IH V K + V+V ++
Sbjct: 104 DALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHS 163
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL----- 367
I +Y + G + A +F + +++VSWNA+I +A GL D A+EVF Q L
Sbjct: 164 AISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMP 223
Query: 368 DGGSME---------RPN----------------VISWSAVIGAFASNGRGEEALDLFRK 402
D G+M +P+ +ISW+A++ +A+N +A++LF
Sbjct: 224 DAGTMAGILPAMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFML 283
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
M+ +V +S+T++ +L C E +A ++G+ IH + R +M N+L++N L++MY CGC
Sbjct: 284 MEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGC 343
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
L++ +F+ + +D+I+W S+IS YG +G G A+ FE+M+ G +PD +AFVAVL+A
Sbjct: 344 LKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAA 403
Query: 523 CSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAY 582
CSHAGL+ +G+ FD M + I P+ EHY CMVDLLGRAG + EA D + M +EPN
Sbjct: 404 CSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEPNER 463
Query: 583 VWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAK 642
VWG LL +CR+H N D+ A +F L+ E TG Y+LLSN+YA +GRW D VR
Sbjct: 464 VWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADVTSVRSVMV 523
Query: 643 TKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILW 702
KG+KK G S +E+ ++H F G+ + + L+EL ++ G P+ + L
Sbjct: 524 NKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVEATLH 583
Query: 703 EM 704
++
Sbjct: 584 DV 585
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 205/411 (49%), Gaps = 52/411 (12%)
Query: 37 LLQQCKT---IHQLKQVHNQLIV---TGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
LL C+ + L+ H +L+V ++A +++ YA L A V E++
Sbjct: 18 LLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHANVKLIQAYAACSALPLAHTVLESSS 77
Query: 91 FDCKS--SSLLWNSILRVNVSNGLYENALKLYVKMRKLG--VLGDGFTFPLVIRACKFMG 146
D +S +++ +N ++R ++ L+ +AL L+ MR G D +T+PL +++C
Sbjct: 78 PDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSC---- 133
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
S G +H+ V ++ NV++ + I MY++ G+ D++++FD + ++ +SWN
Sbjct: 134 SASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWN 193
Query: 207 MMFSGFALNFDCDGALELFKR-MELEGLEPN----------------------------- 236
M +GFA D A+E+FK+ + L+G P+
Sbjct: 194 AMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIRFVRRVFDNM 253
Query: 237 ----FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
++W ++L+ +A + ++LF +M K +E + +A VL C +L+A +GK
Sbjct: 254 QFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGK 313
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
IH + + + ++NAL+ +Y G +K A+ +F + ++++SW ++I++Y + G
Sbjct: 314 RIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHG 373
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
EAV++F EK+ G +E P+ I++ AV+ A + G + F M
Sbjct: 374 HGREAVDLF---EKMLGQGLE-PDSIAFVAVLAACSHAGLLADGKHYFDSM 420
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 133/281 (47%), Gaps = 28/281 (9%)
Query: 83 RNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
R VF+ F + WN++L V +N + A++L++ M K V D T V+ C
Sbjct: 247 RRVFDNMQF---KELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPC 303
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ +F S G+ +H + + N+ + N L+ MYA G + D+ ++FD + ++
Sbjct: 304 GELSAF----SVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDV 359
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
ISW + S + + A++LF++M +GLEP+ + + ++L++ + G L + FD
Sbjct: 360 ISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDS 419
Query: 263 MRKR-GIEVGAEAIAVVLSV-----CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
M R I AE ++ + C + A D F+ E V AL+
Sbjct: 420 MTSRYHIIPKAEHYTCMVDLLGRAGCINEAYD--------FITTMLIEPNERVWGALLQA 471
Query: 317 YGKHGDVKV----AQNLFSEIEEKNIVSWNALITS-YAEAG 352
H ++ + A NLFS + E+ + L+++ YA AG
Sbjct: 472 CRIHSNMDIGLVAADNLFSLVPEQT--GYYVLLSNMYARAG 510
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 8/201 (3%)
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
LI +YA C + LE R + ++ +I A ++ +AL LF M
Sbjct: 56 LIQAYAA---CSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASM 112
Query: 404 QL--AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+ + T L C+ S L +G +IH V ++ +++N+ V + ++MY +CG
Sbjct: 113 RPRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCG 172
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE-MIEAGFKPDGVAFVAVL 520
E+ + VF+ + +D+++WN+MI+G+ GL + A+ F++ ++ G PD +L
Sbjct: 173 RPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGIL 232
Query: 521 SACSHAGL--VNEGRRIFDMM 539
A +A + RR+FD M
Sbjct: 233 PAMGNAKPDDIRFVRRVFDNM 253
>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
Length = 681
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 192/590 (32%), Positives = 313/590 (53%), Gaps = 24/590 (4%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
V S +A+ G + AR +F P + ++WNS++ NG A++L+ ++ L
Sbjct: 109 VFSGFAKAGEMEIARRLFNEMP---NRNGVVWNSMIHSYARNGSPREAVRLFKEL-NLDP 164
Query: 129 LG----DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
L D F VI AC +G + G+ +H +L + + + + LI +Y K
Sbjct: 165 LDKSCCDTFVLATVIGACTDLGEIQC----GKQIHARILIDNMELDSVLTSSLINLYGKC 220
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G + + + + + + S + + +G+A + + A F R V W SL+
Sbjct: 221 GDLDSAHCVLNTMEEPDDFSLSALITGYANHGRMNDARRAFYRKS----NSCVVVWNSLI 276
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
S + E LF+ M+K+G++V +A +LS C+ L GK +H + K G
Sbjct: 277 SGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSACSSLCNSQHGKQMHAYACKVGLI 336
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
V +A I Y K G + A LFSE++ + + N++IT Y+ +G ++A ++F+
Sbjct: 337 CDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSMITVYSNSGKIEDAKQIFN-- 394
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
+M ++ISW+++I + NG EALDLF M + N ++ ++S CA
Sbjct: 395 ------TMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSVISACAS 448
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
++L +G +I V ++ + ++ L++ Y KCG +E G +F+ + K D I+WNSM
Sbjct: 449 ISSLELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSM 508
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
+ GY NG G AL F EM AG +P + F VLSAC H GLV EG R F++M ++
Sbjct: 509 LMGYATNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKEGWRWFNIMQYDYH 568
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
I+P +EHY+CMVDL RAG L+EA +++K MP E +A +W ++L C H D+ E +A
Sbjct: 569 IDPGIEHYSCMVDLFARAGCLEEAMNLIKRMPFEADASMWSSVLRGCMAHGEKDLGEKVA 628
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
QI L E +G+Y+ LS+I+A SG WE +A VR + + ++K G SW
Sbjct: 629 QQIIELDPENSGAYVQLSSIFATSGDWESSALVRKVMQERQVQKYPGYSW 678
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/510 (24%), Positives = 214/510 (41%), Gaps = 74/510 (14%)
Query: 143 KFMGSFRFRFSFGQIVHNHVL--QMGF-QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV 199
+F+ S S Q H+L + G Q + + N L+ MY + G M+D+ KLFD++
Sbjct: 10 RFLQSLNTPHSIHQGKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPH 69
Query: 200 KNYISWNMMFSGFALN---------------------------FDCDGALELFKRMELEG 232
+N SWN M G+ + F G +E+ +R+ E
Sbjct: 70 RNCFSWNTMIEGYMKSGNKERSIRLFDMMSNKNDYSWNVVFSGFAKAGEMEIARRLFNEM 129
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE---VGAEAIAVVLSVCADLAADH 289
N V W S++ S+AR G E + LF + ++ +A V+ C DL
Sbjct: 130 PNRNGVVWNSMIHSYARNGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGACTDLGEIQ 189
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
GK IH ++ E + ++LI +YGK GD+ A + + +EE + S +ALIT YA
Sbjct: 190 CGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFSLSALITGYA 249
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
G ++A F + V+ W+++I + +N EA LF MQ +
Sbjct: 250 NHGRMNDARRAFYR--------KSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLK 301
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL------ 463
+ T++ +LS C+ G+++H + +V + + +V + ++ Y KCG L
Sbjct: 302 VDFSTLATILSACSSLCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKL 361
Query: 464 -------------------------EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
E+ +F + K LI+WNSMI G NG AL
Sbjct: 362 FSELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEAL 421
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
F M + + + +V+SAC+ + G +IF ++ +VD
Sbjct: 422 DLFCMMNKLDLRMNRFNLTSVISACASISSLELGEQIF-ARATVVGLDSDEVISTSLVDF 480
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ G ++ + M M+ + W ++L
Sbjct: 481 YCKCGFIEIGRKLFDTM-MKSDEISWNSML 509
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 223/493 (45%), Gaps = 62/493 (12%)
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM 123
F + +++ YA GR+ DAR F C ++WNS++ V+N A L+ M
Sbjct: 239 FSLSALITGYANHGRMNDARRAFYRKSNSC---VVVWNSLISGYVTNNEEIEAFLLFNDM 295
Query: 124 RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
+K G+ D T ++ AC + + + G+ +H + ++G + + + I Y+K
Sbjct: 296 QKKGLKVDFSTLATILSACSSLCNSQ----HGKQMHAYACKVGLICDNVVASAFIDAYSK 351
Query: 184 MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
G ++D+ KLF +++ + I N M + ++ + + A ++F M + L ++W S+
Sbjct: 352 CGSLNDACKLFSELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSL----ISWNSM 407
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
+ ++ G E +DLF MM K + + + V+S CA +++ +G+ I G
Sbjct: 408 IVGLSQNGCPVEALDLFCMMNKLDLRMNRFNLTSVISACASISSLELGEQIFARATVVGL 467
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
+ + +L+ Y K G +++ + LF + + + +SWN+++ YA G EA+ +F++
Sbjct: 468 DSDEVISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLMGYATNGHGLEALTLFNE 527
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
+ + RP I+++ V+ A G +E F MQ
Sbjct: 528 MRH----AGVRPTEITFTGVLSACDHCGLVKEGWRWFNIMQY------------------ 565
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG-HLVFEQIEKKDLITWN 482
+ H ++ I + +++++ + GCLEE +L+ + D W+
Sbjct: 566 ---------DYH-------IDPGIEHYSCMVDLFARAGCLEEAMNLIKRMPFEADASMWS 609
Query: 483 SMISG---YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
S++ G +G LGE +++IE + G A+V + S G +
Sbjct: 610 SVLRGCMAHGEKDLGEKVA---QQIIELDPENSG-AYVQLSSI-----FATSGDWESSAL 660
Query: 540 VREFRIEPQMEHY 552
VR+ E Q++ Y
Sbjct: 661 VRKVMQERQVQKY 673
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 27/188 (14%)
Query: 427 ALNIGREIH-GHVVRVSMNKNILVQ------NGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
+LN IH G + + K L+Q N LL MY +CG + + H +F+++ ++
Sbjct: 14 SLNTPHSIHQGKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHRNCF 73
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN+MI GY +G E ++ F+ M + ++ V S + AG + RR+F+ M
Sbjct: 74 SWNTMIEGYMKSGNKERSIRLFDMMS----NKNDYSWNVVFSGFAKAGEMEIARRLFNEM 129
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP------NAYVWGTLLNSCRM 593
+ + M+ R G +EA + K + ++P + +V T++ +C
Sbjct: 130 PNRNGVV-----WNSMIHSYARNGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGAC-- 182
Query: 594 HKNTDVAE 601
TD+ E
Sbjct: 183 ---TDLGE 187
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 210/741 (28%), Positives = 364/741 (49%), Gaps = 120/741 (16%)
Query: 26 YNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNV 85
+ ++LL H QQ + + + VH Q+I TGA+ A +++ YA+ G+L A ++
Sbjct: 13 HTSTLLKKLTHHSQQ-RNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 86 FETAPFDCKSSSLLWNSILRVNVSNGLYENA---LKLYVKMRKLGVLGDGFTFPLVIRAC 142
F CK + WNS++ NG ++ ++L+ +MR +L + +T + +A
Sbjct: 72 FN--AIICKDV-VSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ S + G+ H V++M G++++ L+GMY K G + D K+F + +N
Sbjct: 129 SSLQSS----TVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNT 184
Query: 203 ISWNMMFSGFALNFDCDGALE---LFKRMELEGLEPNFVTWTSLLSS------------- 246
+W+ M SG+A + A++ LF R + EG + ++V +T++LSS
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQI 243
Query: 247 ----------------------HARCGRLEETMDLFDMMRKR------------------ 266
+++C L E +FD R
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 267 -------------GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
GI+ I VL+ C+D+ GK +H F++K GFE ++F AL
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTAL 363
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ +Y K G + A+ F ++E+++ W +LI+ Y +
Sbjct: 364 VDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQ----------------------- 400
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
N EEAL L+R+M+ A ++ N T++ +L C+ A L +G++
Sbjct: 401 ----------------NSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ 444
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+HGH ++ + + + L MY KCG LE+G+LVF + KD+++WN+MISG NG
Sbjct: 445 VHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQ 504
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
G+ AL FEEM+ G +PD V FV ++SACSH G V G F+MM + ++P+++HYA
Sbjct: 505 GDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA 564
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
CMVDLL RAG L+EA + +++ ++ +W LL++C+ H ++ ++ L +
Sbjct: 565 CMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSR 624
Query: 614 TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSD 673
+ +Y+ LS IY A GR D +V + G+ K G SWIE+K + H+F G+++
Sbjct: 625 ESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPM 684
Query: 674 LKNVCEVLEELALQMENKGCV 694
++ +++ ++ QM +G V
Sbjct: 685 IEETKDLVCLVSRQMIEEGFV 705
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 190/619 (30%), Positives = 325/619 (52%), Gaps = 51/619 (8%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYA-RFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
K++H LI T + FL + V+ Y+ L A VF +C + ++WN ++R
Sbjct: 34 KELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQ--IECPTL-VVWNHMIRG 90
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
+ A+ +Y +M G+ G+ T + +AC + G+ +H H L++G
Sbjct: 91 LSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDI----VSGRKIHVHALKLG 146
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F+ + + N LI MYA GQ+ + K+FD +
Sbjct: 147 FESYLFVSNALIHMYAMCGQLGFAQKMFDGM----------------------------- 177
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
L+ + V+W +L+ +++ + +E + LFD M I+ A + ++ C+ L
Sbjct: 178 ------LDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLG 231
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
+ ++ + E V++ N LI +YG+ ++AQ +F + E+NIVSWNAL+
Sbjct: 232 DWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVM 291
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
+A+ G A ++F + K D VISW+++I ++ + +A+ LF++M A
Sbjct: 292 GHAKVGNLTAARKLFDNMPKRD--------VISWTSMITGYSQASQFSDAVKLFQEMMAA 343
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
KV + VT++ +LS CA L++G +H ++ R + +I V N L++MY KCG +E+
Sbjct: 344 KVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKA 403
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
VF +++ KD ++W S+ISG +NG +AL F +M+ G +P FV +L AC+HA
Sbjct: 404 LEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHA 463
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GLVN+G F+ M + P M+HY C+VDLL R+G + +A + +K MP+ P+ VW
Sbjct: 464 GLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRI 523
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL++C++H N +AE ++ L +G+Y+LLSN YA RW+DA K+R + +
Sbjct: 524 LLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDV 583
Query: 647 KKVAGQSWIEVKRKIHMFS 665
+K +G S IEV + +S
Sbjct: 584 QKPSGSSSIEVDGMVSNYS 602
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 159/329 (48%), Gaps = 18/329 (5%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
+A+ G L AR +F+ P K + W S++ + +A+KL+ +M V D
Sbjct: 293 HAKVGNLTAARKLFDNMP---KRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDK 349
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
T V+ AC +G + G VH+++ + G Q ++++ N LI MY K G + + +
Sbjct: 350 VTVASVLSACAHLG----KLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALE 405
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+F +++ K+ +SW + SG A+N + AL+LF +M EG++P T+ +L + A G
Sbjct: 406 VFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGL 465
Query: 253 LEETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
+ + ++ F+ M G+ + V+ + + + ++ K + F+ K V V
Sbjct: 466 VNKGLEYFESMESVHGLVPAMKHYGCVVDLLS--RSGNIDKA-YEFIKKMPIVPDVVVWR 522
Query: 312 ALICVYGKHGDV---KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
L+ HG+V ++A E++ + ++ L +YA D+A+++ +E D
Sbjct: 523 ILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSD 582
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEAL 397
+++P+ S S + SN E L
Sbjct: 583 ---VQKPSGSS-SIEVDGMVSNYSQEPGL 607
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY-MKCGCLEEGHLVFEQIEKKDLI 479
V S + + +E+H H++R ++ + + + ++ Y + L + HLVF QIE L+
Sbjct: 23 VSKNSISTDTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLV 82
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
WN MI G + A+ + M G + + + + AC+ + GR+I
Sbjct: 83 VWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKI 138
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 223/740 (30%), Positives = 373/740 (50%), Gaps = 65/740 (8%)
Query: 17 PSRPFSII---TYNNSLLDCFDHLLQQ-CKTIHQLKQVHNQLIVTGANASAFLAARVLSI 72
PS F + + N F LL Q T+ +K +H Q+I + +FLAA+++ +
Sbjct: 29 PSSTFVSVHHAPFFNQAPSVFSSLLHQFSNTLIHVKSIHAQIIKNWVSTESFLAAKLIRV 88
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y+ G L ARNVF+ + + N+++ + N + +L+ M + +
Sbjct: 89 YSDLGFLGHARNVFDQCSL---PETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINS 145
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
+T ++AC + G + ++ GF ++++ + ++ K G ++D+ K
Sbjct: 146 YTCMFALKACTDL----LDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQK 201
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+FD + K+ + WN + G+ ++++F M GL P+ VT +LL + + G
Sbjct: 202 VFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGL 261
Query: 253 LEETM-------------------DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
+ M L DM G + G+ A+ V S+C+ + +
Sbjct: 262 KKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLG-DTGSAAL-VFDSMCSR-SLISWNAM 318
Query: 294 IHGFVIKG-----------------GFEDYVFVKNALICVYGKHGDVKVAQNLFSEI--- 333
I G+V G GF+ V +LI + D++ + L S I
Sbjct: 319 ISGYVQNGMIPESYALFRRLVQSGSGFDSGTLV--SLIRGCSQTSDLENGRILHSCIIRK 376
Query: 334 -EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
E ++V A++ Y++ G +A VF G M + NVI+W+A++ + NG
Sbjct: 377 ELESHLVLSTAIVDMYSKCGAIKQATIVF--------GRMGKKNVITWTAMLVGLSQNGY 428
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
E+AL LF +MQ KV ANSVT+ L+ CA +L GR +H H +R + ++ +
Sbjct: 429 AEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSA 488
Query: 453 LLNMYMKCGCLEEGHLVFE-QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++MY KCG + +F + KD+I NSMI GYGM+G G AL + MIE KP
Sbjct: 489 LIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKP 548
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
+ FV++L+ACSH+GLV EG+ +F M R+ + PQ +HYAC+VDL RAG L+EA ++
Sbjct: 549 NQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADEL 608
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
VK MP +P+ V LL+ CR HKNT++ +A ++ L +G Y++LSNIYA + +W
Sbjct: 609 VKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVMLSNIYAEARKW 668
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
E +R + +G+KK+ G S IEV K++ F + + ++ ++LE L L++E +
Sbjct: 669 ESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQLLENLRLEVEAE 728
Query: 692 GCVPDNDIILWEMMGKKNVK 711
G +PD +L ++ VK
Sbjct: 729 GYIPDTSCVLRDVNEPMKVK 748
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 194/620 (31%), Positives = 312/620 (50%), Gaps = 80/620 (12%)
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
VF P + S++ L+N+++R VS + NA+ LY M K ++ D FTF V++AC
Sbjct: 59 VFHKTPTN--SNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACAR 116
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
+ F G ++H+ V + GF +V + ++ Y+K G + D++K+FD + VKN +S
Sbjct: 117 LNLFHL----GVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVS 172
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
WT ++ G+ E +DLF +
Sbjct: 173 -----------------------------------WTGMICGCIEFGKFREAVDLFRGLL 197
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
+ G+ I VL CA L G+ I + + G VFV +L+ +Y K G ++
Sbjct: 198 ESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSME 257
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A+ +F + EK +++ WSA+I
Sbjct: 258 EARFVFDGMVEK---------------------------------------DIVCWSAMI 278
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
+ASNG EA++LF +M+ V + + G LS CA AL +G G +
Sbjct: 279 QGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFL 338
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
N ++ L++ Y KCG +EE V++ +++KD + +N++ISG M G A F +M
Sbjct: 339 SNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQM 398
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+ G P+ FV +L C+HAGLV++GR F+ M +F + P +EHY CMVDLL RAG
Sbjct: 399 GKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGF 458
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNI 624
L EA +++K MPM+ N VWG+LL CR+H+ T +AE + Q+ L +G Y+LLSNI
Sbjct: 459 LDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNI 518
Query: 625 YAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
Y+AS RW++A K+R + KG++K+ G SW+EV +H F G++ + + E LE L
Sbjct: 519 YSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESL 578
Query: 685 ALQMENKGCVPDNDIILWEM 704
++ G P + +L+++
Sbjct: 579 FKDLKEAGYNPTTEFVLFDV 598
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/478 (22%), Positives = 190/478 (39%), Gaps = 86/478 (17%)
Query: 34 FDHLLQQCKTI---HQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + H +H+ + TG + F+ V+ Y++ G L DA VF+
Sbjct: 107 FSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMV 166
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + W ++ + G + A+ L+ + + G+ DGF V+RAC +G
Sbjct: 167 V---KNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLES 223
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ + + + G NV + L+ MY K G M ++ +FD + K+ + W+ M
Sbjct: 224 ----GRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQ 279
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
G+A N A+ELF M + P D + M V
Sbjct: 280 GYASNGLPREAIELFFEMRKVNVRP----------------------DCYAM-------V 310
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
GA LS CA L A +G G + F + +LI Y K G ++ A ++
Sbjct: 311 GA------LSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVY 364
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
++EK+ V +NA+I+ A G A VF Q+ K
Sbjct: 365 KMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFG---------------------- 402
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR-VSMNKNILV 449
+ N T GLL C + ++ GR + S+ I
Sbjct: 403 -----------------IPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEH 445
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIE-KKDLITWNSMISGYGMNGLGENALATFEEMIE 506
++++ + G L+E H + + + K ++I W S++ G ++ + A +++IE
Sbjct: 446 YGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIE 503
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 156/353 (44%), Gaps = 23/353 (6%)
Query: 58 GANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENAL 117
G + + F+A ++ +Y + G + +AR VF+ + + W+++++ SNGL A+
Sbjct: 235 GLSRNVFVATSLVDMYTKCGSMEEARFVFDGM---VEKDIVCWSAMIQGYASNGLPREAI 291
Query: 118 KLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNEL 177
+L+ +MRK+ V D + + +C +G+ G + F N + L
Sbjct: 292 ELFFEMRKVNVRPDCYAMVGALSSCASLGALEL----GNWAKGLMNYEEFLSNPVLGTSL 347
Query: 178 IGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNF 237
I YAK G M ++ ++ ++ K+ + +N + SG A+ A +F +M G+ PN
Sbjct: 348 IDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNE 407
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCADLA-ADHMGKVIH 295
T+ LL G +++ F+ M + E ++ + A D +I
Sbjct: 408 HTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIK 467
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA-----LITSYAE 350
G +K V V +L+ H + ++A+++ ++ E + WN+ L Y+
Sbjct: 468 GMPMKAN----VIVWGSLLGGCRLHRETQLAEHVLKQLIE--LEPWNSGHYVLLSNIYSA 521
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+ DEA ++ S + + M++ SW V G G+ + L +K+
Sbjct: 522 SRRWDEAEKIRSTVNE---KGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKI 571
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 210/656 (32%), Positives = 335/656 (51%), Gaps = 77/656 (11%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F L ++L ++H I T + SA A+R+ D NVF
Sbjct: 16 FSFRLHPLTNPNKLPRIHGNTIATVEDPSA--ASRL-----------DCANVF------- 55
Query: 94 KSSSLLWNSILRVNVSNGLY--ENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR 151
+WN+++R V NGL + L Y++ + G+ +G TF +++A +
Sbjct: 56 -----VWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKE- 109
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
G+ VH V++ GF + + L+G Y G + ++FD++R
Sbjct: 110 ---GEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMR------------- 153
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+P V WT ++ ++ E+ ++LF MR+ G+
Sbjct: 154 ----------------------QPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPD 191
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
AI+ V+S C L + K +H F+ K G E FV + LI YG+ G + A F
Sbjct: 192 MVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQ 251
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
E KNIV WN +I E + ++F SM +V+SW+++IG FA G
Sbjct: 252 ETPMKNIVVWNTMIHQSVEHNNLELGKQLFQ--------SMPDRDVVSWNSMIGGFARIG 303
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
+ +EAL F +M+ + V N++T+ LS CA AL+ G IH +V + MN++ + +
Sbjct: 304 QYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDS 363
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++MY KCG +++ +FE+ ++DL TW S++ G M+G GE AL F +M EA +P
Sbjct: 364 SLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQP 423
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D V V VLSAC+HAGL+++G F M + F + P++EHY CMVDLLGR G L+EA D+
Sbjct: 424 DDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDLLGRMGCLKEAYDL 483
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
+ MPME N +WG L++CR+H N ++ E A ++ GL + ++LSN+YA +W
Sbjct: 484 IMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLDPRDPWARVMLSNMYAEEAKW 543
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ---SDLKNVCEVLEEL 684
+ + +R K KGLKK G S IEV +H F G++ +++ ++ E +E+L
Sbjct: 544 DRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNSHPCYTEINSMVEKIEKL 599
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 333 bits (853), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 217/745 (29%), Positives = 362/745 (48%), Gaps = 124/745 (16%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
Q+ + L+ + + ++ ++ Y + G + AR VF+ P + S++ W +++ V
Sbjct: 169 QLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALP---EKSTVTWTTMISGCV 225
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
G +L+L+ ++ + V+ DG+ V+ AC + G+ +H H+L+ G +
Sbjct: 226 KMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEG----GKQIHAHILRYGHE 281
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+ ++N LI Y K G++ + KLFD + KN ISW + SG+ N A+ELF M
Sbjct: 282 KDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSM 341
Query: 229 ELEGLEPNFVTWTSLLSS-----------------------------------HARCGRL 253
GL+P+ +S+L+S +A+C L
Sbjct: 342 PKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCL 401
Query: 254 EETMDLFDM----------------------------------MRKRGIEVGAEAIAVVL 279
E +FD+ MR R I +L
Sbjct: 402 TEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLL 461
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
A L + + K IHG + K G +F +ALI VY +K ++ +F E++ K++V
Sbjct: 462 RASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLV 521
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
WN++ + Y + +EA+ +F +L+ S +RP+ ++
Sbjct: 522 IWNSMFSGYVQQSENEEALNLFLELQL----SRDRPDEFTF------------------- 558
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
+ VT +G L A+L +G+E H +++ + N + N LL+MY K
Sbjct: 559 ----------VDMVTAAGNL------ASLQLGQEFHCQLLKRGLECNPYITNALLDMYAK 602
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
CG E+ H F+ +D++ WNS+IS Y +G G AL E+M+ G +P+ + FV V
Sbjct: 603 CGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGV 662
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
LSACSHAGLV +G + F++M+R F IEP+ EHY CMV LLGRAG L EA ++++ MP +P
Sbjct: 663 LSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKP 721
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRI 639
A VW +LL+ C N ++AE A + +GS+ LLSNIYA+ G W DA KVR
Sbjct: 722 AAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRE 781
Query: 640 SAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDI 699
K +G+ K G+SWIE+ +++H+F S + + EVL++L +Q+ + ++
Sbjct: 782 RMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGHMKLIND-- 839
Query: 700 ILWEMMGKKNVKRIQRIRADNIKSK 724
G+++ + IR+ N K++
Sbjct: 840 ------GRRSRCELLTIRSKNNKTR 858
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 121/497 (24%), Positives = 219/497 (44%), Gaps = 85/497 (17%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH Q+IV+G +L+ ++++Y+R G + AR VFE P + + + W++++
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMP---ERNLVTWSTMVSACNH 122
Query: 110 NGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACKFM-GSFRFRFSFGQIVHNHVLQMGF 167
+G YE +L +++ R + + I+AC + GS R+ Q + +++ F
Sbjct: 123 HGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQ---SFLVKSRF 179
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+V++ LI Y K G + + +FD + K+ ++W M SG C
Sbjct: 180 DRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISG------C--------- 224
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
+ GR ++ LF + + + ++ VLS C+ L
Sbjct: 225 --------------------VKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPF 264
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
GK IH +++ G E + N LI Y K G V+ A LF + KNI+SW L++
Sbjct: 265 LEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSG 324
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
Y + L EA+E+F+ + K +P++ + S++
Sbjct: 325 YKQNSLHKEAMELFTSMPKFG----LKPDMFACSSI------------------------ 356
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
L+ CA AL G ++H + ++ ++ + V N L++MY KC CL E
Sbjct: 357 -----------LTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEAR 405
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLG---ENALATFEEMIEAGFKPDGVAFVAVLSACS 524
VF+ D++ +N+MI GY G +AL F +M +P + FV++L A +
Sbjct: 406 KVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASA 465
Query: 525 HAGLVNEGRRIFDMMVR 541
+ ++I +M +
Sbjct: 466 SLTSLGLSKQIHGLMFK 482
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 170/391 (43%), Gaps = 77/391 (19%)
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
+ +VH ++ G + + ++ N L+ +Y++ G M + K+F+K+
Sbjct: 62 YHNVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMP--------------- 106
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGA 272
E N VTW++++S+ G EE++ +F D R R
Sbjct: 107 --------------------ERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNE 146
Query: 273 EAIAVVLSVCADLAADHMGKV--IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
++ + C+ L V + F++K F+ V+V LI Y K G++ A+ +F
Sbjct: 147 YILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVF 206
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+ EK+ V+ W+ +I
Sbjct: 207 DALPEKSTVT---------------------------------------WTTMISGCVKM 227
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
GR +L LF ++ VV + +S +LS C+ L G++IH H++R K+ +
Sbjct: 228 GRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLM 287
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
N L++ Y+KCG + H +F+ + K++I+W +++SGY N L + A+ F M + G K
Sbjct: 288 NVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLK 347
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
PD A ++L++C+ + G ++ ++
Sbjct: 348 PDMFACSSILTSCASLHALEFGTQVHAYTIK 378
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 170/367 (46%), Gaps = 56/367 (15%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSL-LWNSILRV 106
KQ+H + G N F + ++++Y+ L D+R VF+ + K L +WNS+
Sbjct: 474 KQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFD----EMKVKDLVIWNSMFSG 529
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
V E AL L+++++ D FTF ++ A + S + GQ H +L+ G
Sbjct: 530 YVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQL----GQEFHCQLLKRG 585
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+ N +I N L+ MYAK G D+ K FD ++ + WN + S +A + + AL++ +
Sbjct: 586 LECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLE 645
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
+M EG+EPN++T+ +LS+ + G +E+ + F++M + GIE E VC
Sbjct: 646 KMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHY-----VC---- 696
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN-IVSWNALI 345
++ + G+ G + A+ L ++ K + W +L+
Sbjct: 697 --------------------------MVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLL 730
Query: 346 TSYAEAG---LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
+ A+AG L + A E+ + D G S++ + +AS G +A + +
Sbjct: 731 SGCAKAGNVELAEYAAEMAILSDPKDSG--------SFTLLSNIYASKGMWTDAKKVRER 782
Query: 403 MQLAKVV 409
M+ VV
Sbjct: 783 MKFEGVV 789
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 78/163 (47%), Gaps = 9/163 (5%)
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+HG ++ + + + N L+N+Y + G + VFE++ +++L+TW++M+S +G
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 494 GENALATFEEMIEA-GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
E +L F + P+ + + ACS GL GR + ++ F ++ + +
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACS--GLDGSGRWMV-FQLQSFLVKSRFDRD 182
Query: 553 ----ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
++D + G + A + +P E + W T+++ C
Sbjct: 183 VYVGTLLIDFYLKEGNIDYARLVFDALP-EKSTVTWTTMISGC 224
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 333 bits (853), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 182/533 (34%), Positives = 282/533 (52%), Gaps = 66/533 (12%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ +H H++ +G + +L+ Y + GQ+S++ KLFDK+
Sbjct: 46 GRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIP---------------- 89
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
N W L + AR G EE + F M+K G+
Sbjct: 90 -------------------NTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFV 130
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ +L C L+ G+ +H ++K FE ++ +ALI +Y K G V+ A +F I
Sbjct: 131 LPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIV 190
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLE----------------------------- 365
+K++V NA+++ YA+ G EA+ + +++
Sbjct: 191 DKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSE 250
Query: 366 --KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
+L + P+V+SW++VI F N E D F++M +SVTIS LL C
Sbjct: 251 VFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACT 310
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
A L G+EIHG+ + + + K++ V++ L++MY KCG + E ++F + +++ +TWNS
Sbjct: 311 NVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNS 370
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
+I GY +G A+ F +M E+ K D + F AVL+ACSHAG+V G +F M ++
Sbjct: 371 LIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKY 430
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
RIEP++EHYACMVDLLGRAG L EA D++K MP+EP+ +VWG LL +CR H N ++AE
Sbjct: 431 RIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVA 490
Query: 604 ASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
A +F L E+ GS +LLSN+YA +GRW +AAK++ K + K G SWIE
Sbjct: 491 AEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIE 543
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 202/398 (50%), Gaps = 46/398 (11%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
+ +++ + +H L++ G + AA+++S Y G+L +AR +F+ P ++ W
Sbjct: 41 RALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIP---NTNIRRWI 97
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
+ G YE AL + +M+K G+ + F P +++AC + R G+ +H
Sbjct: 98 VLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRR----TGENMHTV 153
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK--------------------- 200
+L+ F+ + +I++ LI MY+K G + + ++FD + K
Sbjct: 154 ILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEA 213
Query: 201 --------------NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
N +SWN + +GF+ D E+F+ M G+EP+ V+WTS++S
Sbjct: 214 LNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISG 273
Query: 247 HARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY 306
+ E D F M +G + I+ +L C ++A GK IHG+ + G E
Sbjct: 274 FVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKD 333
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
V+V++AL+ +Y K G + A+ LF + E+N V+WN+LI YA G C+EA+E+F+Q+E+
Sbjct: 334 VYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEE 393
Query: 367 LDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
D + + ++++AV+ A + G E LFRKMQ
Sbjct: 394 SD----TKLDHLTFTAVLNACSHAGMVELGESLFRKMQ 427
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 139/329 (42%), Gaps = 43/329 (13%)
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
R + ++ A + + A A + G+ +H ++ G + L+ Y + G +
Sbjct: 21 RTFQSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSN 80
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A+ LF +I NI W L + A G +EA+ FS+++K +G RP
Sbjct: 81 ARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQK-EG---LRP---------- 126
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
N + +L C + G +H +++ S
Sbjct: 127 -------------------------NQFVLPSILKACGHLSDRRTGENMHTVILKNSFES 161
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
+ + + L+ MY KCG +E+ VF+ I KDL+ N+M+SGY +G AL ++M
Sbjct: 162 DAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQ 221
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
+AG KP+ V++ +++ S G + +F +M +EP + + ++ +
Sbjct: 222 QAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTAN-GVEPDVVSWTSVISGFVQNFHN 280
Query: 566 QEASDIVKNMPME---PNAYVWGTLLNSC 591
E D K M + P++ +LL +C
Sbjct: 281 HEGFDAFKEMLDQGFCPSSVTISSLLPAC 309
>gi|242061948|ref|XP_002452263.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
gi|241932094|gb|EES05239.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
Length = 603
Score = 333 bits (853), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 312/573 (54%), Gaps = 23/573 (4%)
Query: 130 GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD 189
G F P +I + S G+ VH +++ + + N L+ +Y+++ +
Sbjct: 30 GSAFAIPELIPLLERAISTGDVLRLGRAVHARLVKTALTSHTLLSNRLVALYSRLPSSAA 89
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDC-DGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ FD + KN S+N + + D AL LF M + N V++ +L+SS
Sbjct: 90 AVAAFDDLPHKNAHSYNTLLAALLRRPDTFPDALHLFDTMPADAR--NLVSYNTLMSSLV 147
Query: 249 RCGRLEETMDLF-DMMRKR----GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
GR E + + + R R G+ + + V + CA + A + +HG V+ G
Sbjct: 148 HHGRQAEALRVVARLARDRFLGPGLAMDRFTVVSVATACAGIRAARPLREMHGAVVVSGM 207
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
E V + NA++ Y K V+ A++LF +I ++ V+W ++I+ Y + DEA++VF
Sbjct: 208 ELTVIMANAMVNAYSKAWRVEEARHLFDQISIRDNVTWTSMISGYCQVKKLDEALQVFDM 267
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
+ D ++W+A+I NG + AL+LF +M V + + +L CA
Sbjct: 268 MPDKDR--------VAWTALISGHEQNGEEDTALELFERMLAEGVSPTTFALVSVLGACA 319
Query: 424 ESAALNIGREIHGHVVRVSMNK---NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
+ + G+E+H ++R S+ NI + N L++MY KCG + VF ++ ++D I+
Sbjct: 320 KLGLVTRGKELHCSILRRSIGSDPFNIFIHNALVDMYSKCGDMTAAMAVFHRMPERDFIS 379
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WNSM++G+ NGLG+ +LA FEEM+ AG +P V F+AVL+ACSH+GLV+ GR I + M
Sbjct: 380 WNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRLILESM- 438
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP--MEP-NAYVWGTLLNSCRMHKNT 597
+ +EP+ EHYA +D LGR L+EA + +K++P + P A WG LL +CR+H N
Sbjct: 439 EDHGVEPRAEHYAAFIDALGRNRQLEEAIEFIKDLPSRIGPGTAGSWGALLGACRLHGNI 498
Query: 598 DVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
++AE +A +F L +G Y++LSNIYAA+G+W+DA +VR K KGLKK SWIEV
Sbjct: 499 ELAEEVAEFLFKLEPGNSGRYVMLSNIYAAAGQWDDARRVRGLMKEKGLKKDQAYSWIEV 558
Query: 658 KRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
+ H+F + + + + E+L +L M
Sbjct: 559 RSLKHVFVADDMSHCEADEIYEMLGKLLDHMST 591
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 158/362 (43%), Gaps = 56/362 (15%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP----------- 90
+ L+++H ++V+G + +A +++ Y++ R+ +AR++F+
Sbjct: 190 RAARPLREMHGAVVVSGMELTVIMANAMVNAYSKAWRVEEARHLFDQISIRDNVTWTSMI 249
Query: 91 ---------------FDC--KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
FD + W +++ + NG + AL+L+ +M GV F
Sbjct: 250 SGYCQVKKLDEALQVFDMMPDKDRVAWTALISGHEQNGEEDTALELFERMLAEGVSPTTF 309
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG---NVHIVNELIGMYAKMGQMSDS 190
V+ AC +G + G+ +H +L+ N+ I N L+ MY+K G M+ +
Sbjct: 310 ALVSVLGACAKLG----LVTRGKELHCSILRRSIGSDPFNIFIHNALVDMYSKCGDMTAA 365
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
+F ++ +++ISWN M +GF+ N +L +F+ M + G+ P VT+ ++L++ +
Sbjct: 366 MAVFHRMPERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHS 425
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA---------DLAADHMGKVIHGFVIKG 301
G + + + M G+E AE A + + D ++ G
Sbjct: 426 GLVSNGRLILESMEDHGVEPRAEHYAAFIDALGRNRQLEEAIEFIKDLPSRIGPGTAGSW 485
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFS---EIEEKNIVSWNALITSYAEAGLCDEAV 358
G AL+ HG++++A+ + ++E N + L YA AG D+A
Sbjct: 486 G---------ALLGACRLHGNIELAEEVAEFLFKLEPGNSGRYVMLSNIYAAAGQWDDAR 536
Query: 359 EV 360
V
Sbjct: 537 RV 538
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 333 bits (853), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 209/706 (29%), Positives = 351/706 (49%), Gaps = 86/706 (12%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
LL K + ++H +I+TG A+++ YAR G + AR VF+ +P C
Sbjct: 13 LLITSKDEPTIAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSP-QCGVD 71
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
+ WN+++ G AL LY +M GV D T+ +V++AC R G+
Sbjct: 72 A--WNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRS----GE 125
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+ G+ +V + ++ +YAK G+M ++ ++FDK+ ++
Sbjct: 126 ETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRD--------------- 170
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
V WT++++ A+ G+ E +D++ M K+ +E +
Sbjct: 171 --------------------LVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVML 210
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
++ C L MG IHG++I+ V V+ +L+ +Y K+G +++A +F + K
Sbjct: 211 GLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYK 270
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
N VISWSA+I FA NG A
Sbjct: 271 N---------------------------------------VISWSALISGFAQNGFAGNA 291
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
L L MQ +SV++ +L C++ L +G+ +HG++VR ++ + + +++M
Sbjct: 292 LQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVR-RLHFDCVSSTAVIDM 350
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCG L VF+QI +D I+WN++I+ YG++G GE AL+ F +M E KPD F
Sbjct: 351 YSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATF 410
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
++LSA SH+GLV +GR F +MV E++I+P +HYACMVDLL RAG ++EA +++++M
Sbjct: 411 ASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMI 470
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAK 636
EP +W LL+ C H + E A ++ L + G Y L+SN +A + RW++ A+
Sbjct: 471 TEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVAE 530
Query: 637 VRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
VR K G+KKV G S +EV K+H F + + + +VL +L +M+ G VP
Sbjct: 531 VRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVPK 590
Query: 697 NDIILWEMMGKKNVKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLS 742
+ +L + ++ VK +R+ ++ + G N G RLL++
Sbjct: 591 TEFVLHNL--EEEVK--ERMLCNHSERLAIAFGLLNTGPGTRLLIT 632
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 190/580 (32%), Positives = 300/580 (51%), Gaps = 43/580 (7%)
Query: 117 LKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNE 176
L++YV M G D +TFP +++A R + G VH HV++ G + N H+ +
Sbjct: 3 LRVYVGMLARGARPDAYTFPPLLKAVTAAAE---RGAVGDAVHAHVVKFGMELNAHVASS 59
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN 236
L+ MYA G + + L D + G P
Sbjct: 60 LVLMYAARGDGAVARTLLDAWPARG------------------------------GDTP- 88
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
V W +L+S H R + + F M + G+ VLS C +G +H
Sbjct: 89 -VVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHK 147
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
V+ G + V NALI +Y + ++ A LF +E +N VSW ++I+ + G D+
Sbjct: 148 CVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQ 207
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
A +F + + D +SW+A+I + G+ EAL++FR+MQ +KV A+ T+
Sbjct: 208 ARTLFDCMPERD--------TVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMV 259
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
+++ CA+ AL G ++ R + + V N L++MY KCG +++ VF+++ +
Sbjct: 260 SVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIR 319
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D TW ++I G +NG GE A+ F M+ PD V F+ VL+AC+HAGLV++GR F
Sbjct: 320 DKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFF 379
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
M + I P + H+ C++DLLGRAG L+EA + + NMPM PN+ +WGTLL +CR+H N
Sbjct: 380 LSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHGN 439
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
+++ + A + L TE Y+LLSN+YA S RWED ++R KG+KK G S IE
Sbjct: 440 SEIGQLAAEHLLELDTENGMVYILLSNLYAKSNRWEDVRRLRQVIMEKGIKKEPGCSLIE 499
Query: 657 VKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
+ IH F +G+ K + L+++ +++ G VPD
Sbjct: 500 MNGTIHEFIAGDRSHPMSKEIYSKLDKVLTDLKDAGYVPD 539
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 209/437 (47%), Gaps = 18/437 (4%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH ++ G +A +A+ ++ +YA G AR + + P + ++WN+++ +
Sbjct: 41 VHAHVVKFGMELNAHVASSLVLMYAARGDGAVARTLLDAWPARGGDTPVVWNALISGHRR 100
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
+ + + +V M + GV+ T+ V+ AC G ++ + G VH V+ G
Sbjct: 101 SRQFRLSCCSFVDMVRTGVVPTPVTYITVLSAC---GKDKYIW-LGMQVHKCVVASGVLP 156
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
++ + N LI MYA+ +M +++LF+ + V+N +SW + SGF D A LF M
Sbjct: 157 DLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMP 216
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
E + V+WT+++ + + G+ E +++F M+ + + V++ CA L A
Sbjct: 217 ----ERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALE 272
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
G+ ++ + G + FV NAL+ +Y K G ++ A +F E+ ++ +W A+I A
Sbjct: 273 TGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLA 332
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
G +EA+ +F ++ ++ E P+ +++ V+ A G ++ D F M + +
Sbjct: 333 VNGHGEEAINMFYRMLRV----FEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGI 388
Query: 410 ANSVTISG-LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
A +V G L+ + + L E G+ + M N + LL G E G L
Sbjct: 389 APNVMHFGCLIDLLGRAGKLKEALETIGN---MPMRPNSAIWGTLLAACRVHGNSEIGQL 445
Query: 469 VFEQIEKKDLITWNSMI 485
E + + D T N M+
Sbjct: 446 AAEHLLELD--TENGMV 460
>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g03800-like [Glycine max]
Length = 874
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 210/695 (30%), Positives = 353/695 (50%), Gaps = 65/695 (9%)
Query: 14 PSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIY 73
P N +++T +SLL F H Q+H + T S F+A ++S+Y
Sbjct: 161 PPNEYTYVAVLTACSSLLHHF----------HFGLQLHAAALKTAHFDSPFVANALVSLY 210
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG-DG 132
A+ A +F P + WN+I+ + + LY+ A +L+ M+ D
Sbjct: 211 AKHASFHAALKLFNQIP---RRDIASWNTIISAALQDSLYDTAFRLFRNMQATDAFRVDD 267
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
FT +++ A + GQ VH H +++G + ++++ N LIG Y+K G + D
Sbjct: 268 FTLSILLTASASLME-------GQQVHAHAVKLGLETDLNVGNGLIGFYSKFGNVDDVEW 320
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
LF+ +RV++ I+W M + + + AL++F M E N V++ ++L+ R +
Sbjct: 321 LFEGMRVRDVITWTEMVTAYMEFGLVNLALKVFDEMP----EKNSVSYNTVLAGFCRNEQ 376
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
E M LF M + G+E+ ++ V+ C L + K +HGF +K GF +V+ A
Sbjct: 377 GFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAA 436
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
L+ +Y + G + A +F E +E FS
Sbjct: 437 LLDMYTRCGRMVDAGKMFLRWE-----------------------LEEFSS--------- 464
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFR-KMQLAKVVANSVTISGLLSVCAESAALNIG 431
+ W+A+I +A NG+ EEA+ LF KV+ + V + +L +C L++G
Sbjct: 465 -----VVWTAMICGYARNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMG 519
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
++IH HV++ + N+ V N +++MY KCG +++ VF + D++TWN++ISG M+
Sbjct: 520 KQIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLISGNLMH 579
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSAC--SHAGLVNEGRRIFDMMVREFRIEPQM 549
G+ AL + EM+ G KP+ V FV ++SA ++ LV++ R +F+ M ++IEP
Sbjct: 580 RQGDRALEIWVEMLGEGIKPNQVTFVLIISAYRQTNLNLVDDCRNLFNSMRTVYQIEPTS 639
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
HYA + +LG GLLQEA + + NMP +P+A VW LL+ CR+HKN + + A I
Sbjct: 640 RHYASFISVLGHWGLLQEALETINNMPFQPSALVWRVLLDGCRLHKNELIGKWAAQNILA 699
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
L + +++L+SN+Y+ASGRW+ + VR + KG +K QSWI ++KI+ F +
Sbjct: 700 LEPKDPSTFILVSNLYSASGRWDRSEMVREDMREKGFRKHPAQSWIVCEKKINSFYPRDR 759
Query: 670 LQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
K++ LE L L+ G PD +L E+
Sbjct: 760 SHPQEKDIQRGLEILILECLKIGYEPDTSFVLHEV 794
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 111/232 (47%), Gaps = 18/232 (7%)
Query: 316 VYGKHGDVKVAQNLFSEI---EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
V + GD +A+ + + + +E++ NALI++Y + L A+ +F S+
Sbjct: 73 VSSRSGDTHLAKTVHATLLKRDEEDTHLSNALISTYLKLNLFPHALRLFL--------SL 124
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQL-AKVVANSVTISGLLSVCAE-SAALNI 430
PNV+S++ +I +F S R AL LF +M + + N T +L+ C+ +
Sbjct: 125 PSPNVVSYTTLI-SFLSKHRQHHALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLHHFHF 183
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
G ++H ++ + + V N L+++Y K +F QI ++D+ +WN++IS
Sbjct: 184 GLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIPRRDIASWNTIISAALQ 243
Query: 491 NGLGENALATFEEMIEA-GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
+ L + A F M F+ D +L+A + + EG+++ V+
Sbjct: 244 DSLYDTAFRLFRNMQATDAFRVDDFTLSILLTA---SASLMEGQQVHAHAVK 292
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 170/459 (37%), Positives = 260/459 (56%), Gaps = 55/459 (11%)
Query: 292 KVIHGFVIKGGFEDYVFVKNALICVYGKH------------------------------- 320
+ H V K G + FV NALI Y K+
Sbjct: 224 RAAHTHVFKLGSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAAMVRK 283
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD------------ 368
G+V A+++F E+ EK+ VSWN ++ YA+AG +EA E+F ++ +
Sbjct: 284 GEVDAARSMFDEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQRMPGRNVVSWSTVVSAYC 343
Query: 369 -GGSME----------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
G ME N+++W+ ++ A A G EA LF +M+ A + + V +
Sbjct: 344 KKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVAVVS 403
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE-QIEKK 476
+L+ CAES L +G+ IH HV + + ++ LV N L++M+ KCGC+ +F+ +I +K
Sbjct: 404 ILAACAESGCLALGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEK 463
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D ++WN +I G+ M+G GE AL F +M + GF PD V + VLSAC+H GLV EGRR F
Sbjct: 464 DSVSWNIIIGGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFF 523
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
M ++ I+P++EHY CMVDLLGR GL++EA D++K+MP EPN +WG+LL++CR+HKN
Sbjct: 524 ANMETDYGIKPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWEPNEVIWGSLLSACRLHKN 583
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
+ AE A+++ L G+Y +LSNIYA +G+W D AK R+ K G +K AG SWIE
Sbjct: 584 VEYAELAANELSNLQPSNAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSWIE 643
Query: 657 VKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
+ H F+ G+ + + ++++ L+ ++ GCVP
Sbjct: 644 LDEAFHEFTVGDRKHPESDQISDMIDRLSSHVKCVGCVP 682
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 189/424 (44%), Gaps = 76/424 (17%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS--SSLLWN 101
+ ++++H Q++ G + A+++++ YA R+ R VF A + ++LL N
Sbjct: 117 LRHVQELHAQVLRQGLHRDPRAASKLIASYALLRRVPACRCVFSAAAAPPFAPSTALLAN 176
Query: 102 SILRVNVSNGLYENALKLYVKM--RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
++LR N L AL ++V M R+ D FT+ +I+A G R + H
Sbjct: 177 TLLRAYALNSLPHAALAVFVDMPLRQR----DTFTYSFLIKALATAGVTPVRAA-----H 227
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV-------------------- 199
HV ++G + + N LI Y+K +SD+ K+FD++
Sbjct: 228 THVFKLGSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAAMVRKGEVD 287
Query: 200 -----------KNYISWNMMFSGFALNFDCDGALELFKRMELEGL--------------- 233
K+ +SWN M G+A + + A ELF+RM +
Sbjct: 288 AARSMFDEMPEKDTVSWNTMLDGYAKAGEAEEAFELFQRMPGRNVVSWSTVVSAYCKKGD 347
Query: 234 ------------EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
N VTWT ++S+ A+ G + E LF M++ IE+ A+ +L+
Sbjct: 348 MEMARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVAVVSILAA 407
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF-SEIEEKNIVS 340
CA+ +GK IH V + V NAL+ ++ K G V A +F +EI EK+ VS
Sbjct: 408 CAESGCLALGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEIVEKDSVS 467
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
WN +I +A G ++A+ +F+Q+++ P+ ++ V+ A G EE F
Sbjct: 468 WNIIIGGFAMHGHGEKALNLFTQMKQQGF----HPDAVTLINVLSACTHMGLVEEGRRFF 523
Query: 401 RKMQ 404
M+
Sbjct: 524 ANME 527
>gi|449487105|ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 292/547 (53%), Gaps = 58/547 (10%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H ++ GF +I+N L+ +Y G + + K+F+ +
Sbjct: 46 IHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITA------------------ 87
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
P+ W ++ H R +++++LF M G+E +
Sbjct: 88 -----------------PSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSF 130
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD-----VKVAQNLFSE 332
+LS C G+ IHG V+ G+ ++V+ LI +Y GD +K A+ LF E
Sbjct: 131 LLSACVRSRLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDE 190
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ + N+V WN+L+ Y G D A +VF + M NV +W+ ++ FA NG+
Sbjct: 191 MPDSNVVGWNSLLAGYVRRGDFDGARKVFDE--------MPERNVRTWTIMVAGFAQNGQ 242
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV--- 449
+ AL LF +M+ A V + V + LS CAE L +G+ IHG+V R ++++ V
Sbjct: 243 CKLALSLFDQMRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVS 302
Query: 450 -QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
N L++MY CG ++ + VFE+I +++ ++W+S+I+G+ G G A+ F+ M+ +G
Sbjct: 303 LNNALIHMYASCGVMDLAYKVFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSG 362
Query: 509 ---FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
+PD + F+ L+ACSHAGL+++G R+F M + F + PQ+EHY CMVDLL RAGLL
Sbjct: 363 QNEVRPDEITFIGALTACSHAGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLL 422
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI---TETTGSYMLLS 622
EA ++++MPM+PN VWG LL+ CR+HKN ++ +A + I + G +MLL+
Sbjct: 423 TEALSLIESMPMKPNNAVWGALLSGCRLHKNDEIVSHVAKHLSFEIHPNNQAAGYFMLLA 482
Query: 623 NIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLE 682
N+YAA GRW+D A VR + G+KK +G+SWIE+ + F G D+ + E+L
Sbjct: 483 NVYAADGRWQDTATVRRNMHDIGVKKPSGRSWIEINGVLCSFMVGEETHKDVNLIYEMLG 542
Query: 683 ELALQME 689
+ Q +
Sbjct: 543 NITRQTQ 549
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/380 (31%), Positives = 205/380 (53%), Gaps = 27/380 (7%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE--TAPFDCK 94
+L+ C + L ++H Q++V+G + ++ +LS+Y FG L A+ VFE TAP
Sbjct: 33 VLKSCVSFRNLAKIHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAP---- 88
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR-FS 153
S+ +WN I++ + + + +++L+ +M GV +GFT+ ++ AC R R F
Sbjct: 89 -STTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSAC-----VRSRLFR 142
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD-----SFKLFDKVRVKNYISWNMM 208
G+ +H VL G+ N+++ LI +YA G D + LFD++ N + WN +
Sbjct: 143 EGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWNSL 202
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+G+ D DGA ++F M E N TWT +++ A+ G+ + + LFD MR+ G+
Sbjct: 203 LAGYVRRGDFDGARKVFDEMP----ERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGV 258
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY----VFVKNALICVYGKHGDVK 324
E+ A+ LS CA+L +GK IHG+V + + V + NALI +Y G +
Sbjct: 259 ELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGVMD 318
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
+A +F EI ++N VSW+++IT +A+ G EA+ +F QL G + RP+ I++ +
Sbjct: 319 LAYKVFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIF-QLMLCSGQNEVRPDEITFIGAL 377
Query: 385 GAFASNGRGEEALDLFRKMQ 404
A + G + + LF+ M
Sbjct: 378 TACSHAGLISDGIRLFQSMH 397
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 204/658 (31%), Positives = 324/658 (49%), Gaps = 84/658 (12%)
Query: 50 VHNQLIVT-GANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
VH +++ T + FLA ++++Y++ AR V P + + W S++
Sbjct: 28 VHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTP---ARNVVSWTSLISGLA 84
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
NG + AL + +MR+ GV+ + FTFP +A + S R + G+ +H ++ G
Sbjct: 85 QNGHFSTALVEFFEMRREGVVPNDFTFPCAFKA---VASLRLPVT-GKQIHALAVKCGRI 140
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+V + MY K D+ KLFD++
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIP------------------------------ 170
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E N TW + +S+ GR E ++ F R+ + L+ C+D
Sbjct: 171 -----ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHL 225
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
++G +HG V++ GF+ V V N LI YGK ++ ++ +F+E+ KN VS
Sbjct: 226 NLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVS-------- 277
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
W +++ A+ N E+A L+ + + V
Sbjct: 278 -------------------------------WCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+ IS +LS CA A L +GR IH H V+ + + I V + L++MY KCGC+E+
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE--AGFKPDGVAFVAVLSACSHA 526
F+++ +K+L+T NS+I GY G + ALA FEEM G P+ + FV++LSACS A
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
G V G +IFD M + IEP EHY+C+VD+LGRAG+++ A + +K MP++P VWG
Sbjct: 427 GAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 486
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
L N+CRMH + A +F L + +G+++LLSN +AA+GRW +A VR K G+
Sbjct: 487 LQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGI 546
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
KK AG SWI VK ++H F + + K + L +L +ME G PD + L+++
Sbjct: 547 KKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDL 604
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 162/357 (45%), Gaps = 44/357 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H + G F+ +Y + DAR +F+ P + + WN+ + +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP---ERNLETWNAFISNS 184
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
V++G A++ +++ R++ + TF + AC S + G +H VL+ GF
Sbjct: 185 VTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC----SDWLHLNLGMQLHGLVLRSGF 240
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+V + N LI Y K Q+ S +F ++ KN +SW + + + N + + A L+ R
Sbjct: 241 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR 300
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
RK +E I+ VLS CA +A
Sbjct: 301 -----------------------------------SRKDIVETSDFMISSVLSACAGMAG 325
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+G+ IH +K E +FV +AL+ +YGK G ++ ++ F E+ EKN+V+ N+LI
Sbjct: 326 LELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGG 385
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
YA G D A+ +F ++ G PN +++ +++ A + G E + +F M+
Sbjct: 386 YAHQGQVDMALALFEEMAPRGCGPT--PNYMTFVSLLSACSRAGAVENGMKIFDSMR 440
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 176/428 (41%), Gaps = 73/428 (17%)
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKG-GFEDYVFVKNALICVYGKHGDVKVAQN 328
+ A+A+ ++L ++ +G+V+H ++K F+ N LI +Y K + A+
Sbjct: 4 LSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARL 63
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+ +N+VSW +LI+ A+ G A+ F ++ + G + PN ++ A A
Sbjct: 64 VLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRR--EGVV--PNDFTFPCAFKAVA 119
Query: 389 S----------------NGR------GEEALDLFRKMQLAK------------------- 407
S GR G A D++ K +L
Sbjct: 120 SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 179
Query: 408 VVANSV-------------------------TISGLLSVCAESAALNIGREIHGHVVRVS 442
++NSV T L+ C++ LN+G ++HG V+R
Sbjct: 180 FISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG 239
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFE 502
+ ++ V NGL++ Y KC + ++F ++ K+ ++W S+++ Y N E A +
Sbjct: 240 FDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 299
Query: 503 EMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRA 562
+ + +VLSAC+ + GR I V+ +E + + +VD+ G+
Sbjct: 300 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC-VERTIFVGSALVDMYGKC 358
Query: 563 GLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLS 622
G ++++ MP E N +L+ D+A A+ ++ T +YM
Sbjct: 359 GCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFV 417
Query: 623 NIYAASGR 630
++ +A R
Sbjct: 418 SLLSACSR 425
>gi|15228653|ref|NP_189568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273910|sp|Q9LS72.1|PP261_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g29230
gi|9293916|dbj|BAB01819.1| unnamed protein product [Arabidopsis thaliana]
gi|332644032|gb|AEE77553.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 600
Score = 332 bits (852), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 191/628 (30%), Positives = 323/628 (51%), Gaps = 85/628 (13%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
L +C ++Q+KQ+H Q+I + +A +++S + + A VF + +
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQ---EPNV 82
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
L NS++R + N A ++ +M++ G+ D FT+P +++AC S + ++
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKAC----SGQSWLPVVKM 138
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+HNH+ ++G ++++ N LI Y++ G + VR
Sbjct: 139 MHNHIEKLGLSSDIYVPNALIDCYSRCGGLG--------VR------------------- 171
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
A++LF++M E + V+W S+L + G L + LFD M +R +
Sbjct: 172 --DAMKLFEKMS----ERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDL--------- 216
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
N ++ Y + ++ A LF ++ E+N
Sbjct: 217 ------------------------------ISWNTMLDGYARCREMSKAFELFEKMPERN 246
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
VSW+ ++ Y++AG + A +F ++ + NV++W+ +I +A G +EA
Sbjct: 247 TVSWSTMVMGYSKAGDMEMARVMFDKM------PLPAKNVVTWTIIIAGYAEKGLLKEAD 300
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
L +M + + ++ + +L+ C ES L++G IH + R ++ N V N LL+MY
Sbjct: 301 RLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMY 360
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG L++ VF I KKDL++WN+M+ G G++G G+ A+ F M G +PD V F+
Sbjct: 361 AKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFI 420
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
AVL +C+HAGL++EG F M + + + PQ+EHY C+VDLLGR G L+EA +V+ MPM
Sbjct: 421 AVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPM 480
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
EPN +WG LL +CRMH D+A+ + + L G+Y LLSNIYAA+ WE A +
Sbjct: 481 EPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADI 540
Query: 638 RISAKTKGLKKVAGQSWIEVKRKIHMFS 665
R K+ G++K +G S +E++ IH F+
Sbjct: 541 RSKMKSMGVEKPSGASSVELEDGIHEFT 568
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 332 bits (852), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 190/649 (29%), Positives = 323/649 (49%), Gaps = 101/649 (15%)
Query: 114 ENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHI 173
++AL + +M+ V + F +++ C + G+ +H V+ GF N+
Sbjct: 12 DSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKR----GKEIHGSVITSGFSWNLFA 67
Query: 174 VNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL 233
+ ++ MYAK Q++D++ +FD++
Sbjct: 68 MTGVVNMYAKCRQINDAYNMFDRMP----------------------------------- 92
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
E + V W +++S +A+ G + + L M + G + I +L AD +G
Sbjct: 93 ERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMA 152
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG- 352
+HG+V++ GFE V V AL+ +Y K G V +A+ +F ++ + +VSWN++I Y ++G
Sbjct: 153 VHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGD 212
Query: 353 ----------LCDEAVE------------------------------------------- 359
+ DE V+
Sbjct: 213 AEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNS 272
Query: 360 ---VFSQLEKLDGGS-----MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVAN 411
++S+ +++D + + ++SW+A+I +A NG EAL+ F +MQ + +
Sbjct: 273 LISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPD 332
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
S T+ ++ AE + + IHG V+R ++KN+ V L++MY KCG + +F+
Sbjct: 333 SFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFD 392
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
+ + +ITWN+MI GYG +GLG+ ++ F+EM + KP+ + F+ LSACSH+GLV E
Sbjct: 393 MMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEE 452
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
G F+ M +++ IEP M+HY MVDLLGRAG L +A D ++ MP++P V+G +L +C
Sbjct: 453 GLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGAC 512
Query: 592 RMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
++HKN D+ E A +IF L + G ++LL+NIYA + W AKVR + GL+K G
Sbjct: 513 KIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPG 572
Query: 652 QSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
S +E+ ++H F SG + K + LE L ++ G VPD + I
Sbjct: 573 CSLVEIGNEVHSFYSGTTSHPQSKKIYSYLETLVDEIRAAGYVPDTNSI 621
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 160/353 (45%), Gaps = 44/353 (12%)
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
+L +A+ L+ + F M+ + +L +C D + GK IHG VI G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
F +F ++ +Y K + A N+F + E+++V WN +I+ YA+
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQ------------ 108
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
NG + AL L +M +S+TI +L
Sbjct: 109 ---------------------------NGFAKVALMLVLRMSEEGHRPDSITIVSILPAV 141
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A++ L IG +HG+V+R + V L++MY KCG + ++F+ ++ + +++WN
Sbjct: 142 ADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWN 201
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
SMI GY +G E A+ F++M++ G +P V + L AC+ G + G+ + +V +
Sbjct: 202 SMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHK-LVDQ 260
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP----NAYVWGTLLNSC 591
+++ + ++ + + + A+DI KN+ + NA + G N C
Sbjct: 261 LKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGC 313
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 213/723 (29%), Positives = 356/723 (49%), Gaps = 84/723 (11%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
Q+H + G + + ++ +YA+ L D+ +VF P + + W++ + V
Sbjct: 178 QIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELP---DKNWISWSAAIAGCV 234
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
N LKL+ +M++ G+ T+ V R+C + + R G +H H L+ F
Sbjct: 235 QNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRL----GTQLHCHALKTDFG 290
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+V + + MYAK MSD++KLF + N S+N M G+A N A +LF ++
Sbjct: 291 SDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQL 350
Query: 229 EL------------------------EGLE-----------PNFVTWTSLLSSHARCGRL 253
+ EGL+ N ++L + +CG L
Sbjct: 351 QKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGAL 410
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF--VIKGGFEDYVFVKN 311
E LFD M R V AI ++ C ++ GK + F +++ E F
Sbjct: 411 VEASGLFDEMEIRD-PVSWNAI---ITACEQNESE--GKTLSHFGAMLRSKMEPDEFT-- 462
Query: 312 ALICVYGKHGDVKVAQNLFS---EIEEKNIVSW--------NALITSYAEAGLCDEAVEV 360
YG Q FS E+ + I S +AL+ Y++ G+ +EA ++
Sbjct: 463 -----YGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKI 517
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
+LE+ ++SW+A+I F+ + E++ F M V ++ T + +L
Sbjct: 518 HYRLEE--------QTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLD 569
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
CA A + +G++IH ++++ + ++ + + L++MY KCG + + L+F + K+D +T
Sbjct: 570 TCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVT 629
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WN+MI G+ +GLGE AL FE M+ KP+ FV+VL ACSH G +G F M
Sbjct: 630 WNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMA 689
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
+ +EPQ+EHY+CMVD+LGR+G ++EA ++++MP E +A +W TLL+ C++ N +VA
Sbjct: 690 SIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVA 749
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
E AS + L E + +Y LLSNIYA +G W+ +K+R + ++ LKK G SWIEVK +
Sbjct: 750 EKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDE 809
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADN 720
+H F + + + +L+ L M GC P+ D I V+ ++ R
Sbjct: 810 VHTFLVCDKAHPKCEMIYSLLDLLICDMRRSGCAPEIDTI--------QVEEVEENRHQK 861
Query: 721 IKS 723
+KS
Sbjct: 862 VKS 864
Score = 195 bits (496), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 150/649 (23%), Positives = 272/649 (41%), Gaps = 135/649 (20%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F H+ Q+C LK + H +I++G + F+ ++ +Y + L A VFE P
Sbjct: 27 FSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMP 86
Query: 91 -----------FDCKSSSLL------------------WNSILRVNVSNGLYENALKLYV 121
F C + + WNS++ + NG + ++ +++
Sbjct: 87 QRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFL 146
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
KMR LGV+ D T + ++ C + G +H +QMGF +V + L+ MY
Sbjct: 147 KMRDLGVMFDHTTLAVSLKICSLLEDQ----VLGIQIHGIAVQMGFDYDVVTGSALVDMY 202
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
AK + DS +F ++ KN+ISW+ +G N L+LFK M+
Sbjct: 203 AKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQ------------ 250
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
++GI V A V CA L+A +G +H +K
Sbjct: 251 -----------------------RKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKT 287
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
F V V A + +Y K ++ A LFS + + N+ S+NA+I YA +A ++F
Sbjct: 288 DFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLF 347
Query: 362 SQLEK---------LDGG----------------------SMERPNVISWSAVIGAFASN 390
QL+K L G S N+ +A++ +
Sbjct: 348 LQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKC 407
Query: 391 GRGEEALDLFRKMQL-------------------------------AKVVANSVTISGLL 419
G EA LF +M++ +K+ + T +L
Sbjct: 408 GALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVL 467
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
CA A + G E+HG +++ M + V + L++MY KCG +EE + ++E++ ++
Sbjct: 468 KACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMV 527
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN++ISG+ + E++ F M+E G +PD + VL C++ V G++I M
Sbjct: 528 SWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQM 587
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
++ + + + +VD+ + G + ++ + + P + ++ W ++
Sbjct: 588 IK-LELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAP-KRDSVTWNAMI 634
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/463 (25%), Positives = 216/463 (46%), Gaps = 48/463 (10%)
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
TF + + C S R G+ H H++ GF V + N LI MY K + ++K+
Sbjct: 26 TFSHIFQEC----SNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKV 81
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
F+++ ++ +SWN M G A + A +F M G + V+W SL+S + + G +
Sbjct: 82 FEEMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHG---DVVSWNSLISGYLQNGDI 138
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
++++ +F MR G+ +AV L +C+ L +G IHG ++ GF DY
Sbjct: 139 QKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGF-DY------- 190
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
++V+ +AL+ YA+ +++++VFS+L
Sbjct: 191 -----------------------DVVTGSALVDMYAKCNSLEDSLDVFSELPD------- 220
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
N ISWSA I N + L LF++MQ + + T + + CA +A +G +
Sbjct: 221 -KNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQ 279
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+H H ++ +++V L+MY KC + + + +F + +L ++N+MI GY N
Sbjct: 280 LHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQ 339
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
G A F ++ + F D V+ LSA + +EG ++ + ++ + +
Sbjct: 340 GFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKS-NLSSNICVAN 398
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
++D+ G+ G L EAS + M + + W ++ +C +++
Sbjct: 399 AILDMYGKCGALVEASGLFDEMEIR-DPVSWNAIITACEQNES 440
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 116/248 (46%), Gaps = 18/248 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H Q+I + ++ + ++ +Y++ G + D+ +F AP K S+ WN+++
Sbjct: 581 KQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAP---KRDSVTWNAMICGF 637
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR-FSFGQIVHNHVLQMG 166
+GL E AL+L+ M + + TF V+RAC +G+ + F F ++ + L+
Sbjct: 638 AYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQ 697
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELF 225
+ +V+ L + GQ+ ++ +L + + + I W + S + G +E+
Sbjct: 698 LEHYSCMVDIL----GRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQ----GNVEVA 749
Query: 226 KRM--ELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGI--EVGAEAIAVVLS 280
++ L L+P + +LLS+ +A G ++ + MR + E G I V
Sbjct: 750 EKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDE 809
Query: 281 VCADLAAD 288
V L D
Sbjct: 810 VHTFLVCD 817
>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 207/696 (29%), Positives = 353/696 (50%), Gaps = 87/696 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLF-DARNVFETAPFDCKSSSLLWNSILRV 106
K VH+ +I +G + ++S+YA+ G + DA F F + WN+++
Sbjct: 100 KSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEF---KDVVSWNAVIAG 156
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ-M 165
N E A KL+ M K + + T ++ C + + +G+ VH HVL+ M
Sbjct: 157 FSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEE-NAGYRYGKEVHCHVLRRM 215
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
+V ++N L+ Y ++GQM + LF ++ ++ +SWN + +G+A N + ALELF
Sbjct: 216 ELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELF 275
Query: 226 KR-MELEGLEPNFVTWTS------------------------------------LLSSHA 248
+ LE ++P+ VT S LLS +A
Sbjct: 276 SEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYA 335
Query: 249 RCGRLEETMDLFDM-------------------------------MRKRGIEVGAEAIAV 277
+C + + F M M + GI + I
Sbjct: 336 KCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILT 395
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGF---EDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
++ A ++ K H + I+ G + + N ++ Y K G++K A N+F +
Sbjct: 396 IIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLS 455
Query: 335 EK-NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
EK N+V+ N++I+ Y + D+A +F+ + + D + +W+ ++ +A N
Sbjct: 456 EKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETD--------LTTWNLMVRVYAENDFP 507
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
++AL LF ++Q + + VTI +L CA A++++ R+ HG+V+R N ++ +
Sbjct: 508 DQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFN-DVRLNGAF 566
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY KCG + + +F +KDL+ + +M+ G+ M+G+GE AL F M+E G KPD
Sbjct: 567 IDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDH 626
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
V AVL ACSHAGLV+EG +IF+ + + +P ME YAC+VDLL R G +++A V
Sbjct: 627 VIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVT 686
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
MP+E NA +WGTLL +CR H ++ +A +F + ++ G+Y+++SN+YAA RW+
Sbjct: 687 RMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWDG 746
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
++R +T+ LKK AG SWIEV R+ ++F +G+S
Sbjct: 747 VMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDS 782
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 176/375 (46%), Gaps = 85/375 (22%)
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA--LELFKRMEL-EGL 233
L+ +YAK G + KLF ++ ++ + WN++ SG A F A + LF+ M +
Sbjct: 19 LLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLA-GFQSHEAEVMRLFRAMHMVNEA 77
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
+PN VT IA+VL VCA L D GK
Sbjct: 78 KPNSVT-----------------------------------IAIVLPVCARLRED-AGKS 101
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
+H +VIK G E + ++ NALI+ YA+ GL
Sbjct: 102 VHSYVIKSGLESHT-------------------------------LAGNALISMYAKCGL 130
Query: 354 -CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
C +A F+++E D V+SW+AVI F+ N EEA LF M + N
Sbjct: 131 VCSDAYAAFNRIEFKD--------VVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNY 182
Query: 413 VTISGLLSVCA---ESAALNIGREIHGHVVR-VSMNKNILVQNGLLNMYMKCGCLEEGHL 468
TI+ +L VCA E+A G+E+H HV+R + + +++ V N L++ Y++ G +E+
Sbjct: 183 ATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAEF 242
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE-AGFKPDGVAFVAVLSACSHAG 527
+F ++ +DL++WN++I+GY NG AL F E I KPD V V+VL AC+H
Sbjct: 243 LFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVH 302
Query: 528 LVNEGRRIFDMMVRE 542
+ + I ++R
Sbjct: 303 NLQVAKGIHGYIIRH 317
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 135/597 (22%), Positives = 254/597 (42%), Gaps = 102/597 (17%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYE-NALKLYVKM 123
L +L++YA+ G L +F + ++WN +L +E ++L+ M
Sbjct: 15 LCKGLLNLYAKSGALDYCNKLFGEMD---QRDPVIWNIVLSGLAGFQSHEAEVMRLFRAM 71
Query: 124 RKLG-VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
+ + T +V+ C R R G+ VH++V++ G + + N LI MYA
Sbjct: 72 HMVNEAKPNSVTIAIVLPVCA-----RLREDAGKSVHSYVIKSGLESHTLAGNALISMYA 126
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K G + C A F R+E + + V+W +
Sbjct: 127 KCGLV------------------------------CSDAYAAFNRIEFK----DVVSWNA 152
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL---AADHMGKVIHGFVI 299
+++ + EE LF M K I+ IA +L VCA L A GK +H V+
Sbjct: 153 VIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVL 212
Query: 300 KGG--FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
+ ED V V N+L+ Y + G ++ A+ LF ++ +++V
Sbjct: 213 RRMELVED-VSVINSLMSFYLRIGQMEKAEFLFRNMKSRDLV------------------ 253
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK-MQLAKVVANSVTIS 416
SW+A+I +ASNG +AL+LF + + L + +SVT+
Sbjct: 254 ---------------------SWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLV 292
Query: 417 GLLSVCAESAALNIGREIHGHVVR-VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
+L CA L + + IHG+++R + ++ V N LL+ Y KC + F I +
Sbjct: 293 SVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISR 352
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
KDLI+WN+++ + +G + + M+ G +PD + + ++ + V + +
Sbjct: 353 KDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKET 412
Query: 536 FDMMVREFRIE----PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
+R ++ P + + M+D + G ++ A +I ++ + N ++++
Sbjct: 413 HSYSIRFGLLQGDAGPTLGN--GMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGY 470
Query: 592 RMHKNTDVAEAMASQIFGLITETT-GSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
+ D A A IF ++ET ++ L+ +YA + + A + + +G+K
Sbjct: 471 VNSSSHDDAYA----IFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMK 523
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 179/475 (37%), Gaps = 115/475 (24%)
Query: 37 LLQQCKTIHQL---KQVHNQLIV-TGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
+L C +H L K +H +I G + +LS YA+ + +T
Sbjct: 294 VLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNY---TQAALQTFLMI 350
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVI---------RACK 143
+ + WN+IL +G + + L M + G+ D T +I + K
Sbjct: 351 SRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVK 410
Query: 144 FMGSFRFRFSF-----GQIVHNHVLQ-----------------MGFQGNVHIVNELIGMY 181
S+ RF G + N +L + + NV N +I Y
Sbjct: 411 ETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGY 470
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
D++ +F+ + + +WN+M +A N D AL LF ++ +G++P+ VT
Sbjct: 471 VNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVT-- 528
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
I +L CA +A+ HM + HG+VI+
Sbjct: 529 ---------------------------------IMSILPACAHMASVHMLRQCHGYVIRA 555
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA------------ 349
F D V + A I +Y K G V A LF +K++V + A++ +A
Sbjct: 556 CFND-VRLNGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIF 614
Query: 350 -----------------------EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
AGL DE ++F+ +EK+ G +P + ++ V+
Sbjct: 615 SYMLELGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGF---QPTMEQYACVVDL 671
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
A GR ++A +M + AN+ LL C + +GR + H+ ++
Sbjct: 672 LARGGRIKDAYTFVTRMPIE---ANANIWGTLLGACRTHHEVELGRVVADHLFKI 723
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 187/564 (33%), Positives = 301/564 (53%), Gaps = 47/564 (8%)
Query: 173 IVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG 232
I N L+ +YAK G++S + KLFD++ ++ SWN M S +A + + +F M
Sbjct: 60 IHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMP--- 116
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
+ V++ +++S A GR + +F M+K G++ VL+ C L GK
Sbjct: 117 -SRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGK 175
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT------ 346
IHG +I VFV NAL +Y + G++ A+ LF + +N+V+WN +I+
Sbjct: 176 QIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNR 235
Query: 347 -----------------------------SYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
+Y +AG DEA +VF ++ + D
Sbjct: 236 QPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDE-------- 287
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
+ W+ +I A NG+ E+AL LF +M L + TIS ++S CA+ A+L G+ +HG
Sbjct: 288 VCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGK 347
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
+ +N ++LV + L++MY KCG + +F ++ +++++WNSMI GY +NG A
Sbjct: 348 AFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEA 407
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
L+ +E M+E KPD V FV VLSAC HAGLV EG+ F M + +EP +HYACMV+
Sbjct: 408 LSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVN 467
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
L GR+G + +A D++ +M EPN+ +W T+L+ C M + E A + L
Sbjct: 468 LFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVP 527
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
Y++LSN+YAA GRW+D A +R K+K +KK + SWIE+ ++H F + + D K +
Sbjct: 528 YIMLSNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKII 587
Query: 678 CEVLEELALQMENKGCVPDNDIIL 701
L L +++ G P+ +++L
Sbjct: 588 HVQLNRLIRKLQEAGFSPNTNLVL 611
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 188/368 (51%), Gaps = 46/368 (12%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS+YA+ G + D R +F+ P S+ +N+++ NG AL ++++M+K G+
Sbjct: 95 MLSLYAKSGLVEDLRVIFDNMP---SRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGL 151
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+T V+ AC + R G+ +H ++ GNV + N L +YA+ G++
Sbjct: 152 KPTEYTHVSVLNACTQLLDLRR----GKQIHGRIIICNLGGNVFVCNALTDLYARCGEID 207
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ +LFD++ ++N ++WN+M SG+ N + ++LF M++ L+P+ VT +S+L ++
Sbjct: 208 QARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYI 267
Query: 249 RCGRLEETMDLFDMMRKR---------------GIEVGA----------------EAIAV 277
+ G ++E +F +R++ G E A I+
Sbjct: 268 QAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISS 327
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
V+S CA LA+ + G+V+HG G D + V +AL+ +Y K G + A +FS ++ +N
Sbjct: 328 VVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRN 387
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQL--EKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
+VSWN++I YA G EA+ ++ + E L +P+ +++ V+ A G EE
Sbjct: 388 VVSWNSMIGGYALNGQDLEALSLYENMLEENL------KPDSVTFVGVLSACVHAGLVEE 441
Query: 396 ALDLFRKM 403
+ F M
Sbjct: 442 GKEYFCSM 449
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 155/288 (53%), Gaps = 16/288 (5%)
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
F+ N L+ +Y K G++ A+ LF E+ +++ SWNA+++ YA++GL ++ +F +
Sbjct: 58 TFIHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPS 117
Query: 367 LDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
D +S++ VI FA NGRG AL +F +MQ + T +L+ C +
Sbjct: 118 RDS--------VSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLL 169
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
L G++IHG ++ ++ N+ V N L ++Y +CG +++ +F+++ ++++TWN MIS
Sbjct: 170 DLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMIS 229
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
GY N E + F EM + KPD V +VL A AG ++E R++F E R E
Sbjct: 230 GYLKNRQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFG----EIR-E 284
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTLLNSC 591
+ M+ + G ++A + M +E P+ Y ++++SC
Sbjct: 285 KDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSC 332
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 158/385 (41%), Gaps = 74/385 (19%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE-------------------- 87
KQ+H ++I+ + F+ + +YAR G + AR +F+
Sbjct: 175 KQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKN 234
Query: 88 TAPFDC------------KSSSLLWNSILRVNVSNGLYENALKLYVKMRK-------LGV 128
P C K + +S+L + G + A K++ ++R+ + +
Sbjct: 235 RQPEKCIDLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIREKDEVCWTIMI 294
Query: 129 LG------------------------DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
+G DG+T V+ +C + S GQ+VH
Sbjct: 295 VGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLY----HGQVVHGKAFL 350
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
MG ++ + + L+ MY K G D++ +F ++ +N +SWN M G+ALN AL L
Sbjct: 351 MGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSL 410
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCA 283
++ M E L+P+ VT+ +LS+ G +EE + F M + G+E + A ++++
Sbjct: 411 YENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFG 470
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK---VAQNLFSEIEEKNIVS 340
+ HM K + + E + ++ V GD+K +A E+ N V
Sbjct: 471 --RSGHMDKAV-DLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVP 527
Query: 341 WNALITSYAEAGLCDEAVEVFSQLE 365
+ L YA G + + S ++
Sbjct: 528 YIMLSNMYAARGRWKDVASIRSLMK 552
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 332 bits (851), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 204/659 (30%), Positives = 350/659 (53%), Gaps = 55/659 (8%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
LL+ C + +L Q+H L VTG A F A+R+L+ A A A +
Sbjct: 41 LLESCASFRRLLQLHALLTVTGLAAHRFPASRLLAFCALSTPPRLAHAAAILARASPGPN 100
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF--RFSF 154
+ + +++R + L AL L+ ++ + + D TF ++A S
Sbjct: 101 AYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGGTPSG 160
Query: 155 GQIVHNHVLQMGFQG-NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H L+ GF G +V + N L+ YA + D+ K+FD++
Sbjct: 161 GEAIHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMP--------------- 205
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGA 272
E + V+WT+L+ +AR G +E LF M+ G+ A
Sbjct: 206 --------------------ERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNA 245
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ +S + G ++H +V +GG V + NAL+ ++GK G V+ A+ +F
Sbjct: 246 VTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDG 305
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+E K++ SW +++ +YA+ G + A ++F M R NV+SWS +I A++ +
Sbjct: 306 MEVKDVYSWTSMVNAYAKCGDLESAEQLFKD--------MPRRNVVSWSCMIAAYSQLNQ 357
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH-GHVVRVSMNKNILVQN 451
EEA+ LFR+M A V T+ +LS CA+ L++GR I+ ++V + + + N
Sbjct: 358 PEEAVWLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGN 417
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++M+ KCG + E +F+++ ++++++WN+MI + ++G E A+ FE++ P
Sbjct: 418 ALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVP 477
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D + F+ +L++CSH+GLV+EGRR F M +RIEP++EHYACM+DLLG+ GLL+EA ++
Sbjct: 478 DQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEV 537
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
+ MPME + WG LLN+CRMH N ++ +A ++ L +G Y+L+S IYA+ +W
Sbjct: 538 ARGMPMEADEAGWGALLNACRMHGNVEIGACVADKLVELDPSDSGIYVLMSQIYASKNKW 597
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
+ +R++ + +G+KK G S IEV+ K H F L +D+ + C EE+ ++N
Sbjct: 598 DQVKMLRMTMRDRGVKKNPGCSSIEVEGKFHDF-----LVADVSHACS--EEIYSALKN 649
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 117/241 (48%), Gaps = 16/241 (6%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
+ +N+L+D F +C + ++V + + V + +++ YA+ G L A
Sbjct: 280 VNLDNALVDMFG----KCGCVRYAREVFDGMEVK----DVYSWTSMVNAYAKCGDLESAE 331
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
+F+ P + + + W+ ++ E A+ L+ +M GV T V+ AC
Sbjct: 332 QLFKDMP---RRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSACA 388
Query: 144 FMGSFRFRFSFGQ-IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+G G+ I N+++ V++ N LI M+AK G + ++ KLFD++ +N
Sbjct: 389 QLGCL----DLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAERNV 444
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
+SWN M A++ + A+ LF++++ E + P+ +T+ LL+S + G + E F
Sbjct: 445 VSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKE 504
Query: 263 M 263
M
Sbjct: 505 M 505
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 185/534 (34%), Positives = 302/534 (56%), Gaps = 28/534 (5%)
Query: 174 VNELIGMYAKM---GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
+N+++ ++A++ G D F +F+ +R + C A++ R+
Sbjct: 62 INQVLPIHAQLIRNGHSQDPFMVFELLRSCS---------------KCH-AIDYASRIFQ 105
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
PN +T+L+ G E + L+ M I +A +L C A
Sbjct: 106 YTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALRE 165
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
G+ +H +K GF V+ ++ +YGK G++ A+ +F E+ E ++V+ +I+SY++
Sbjct: 166 GREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSD 224
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
GL +EA VFS++ + D + W+A+I F N AL+ FR MQ V
Sbjct: 225 QGLVEEAGAVFSRVRRKD--------TVCWTAMIDGFVRNEETNRALEAFRGMQGENVRP 276
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
N TI +LS C++ AL IGR +H ++ + + N+ V N L+NMY +CG ++E VF
Sbjct: 277 NEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVF 336
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
++++ +D+IT+N+MISG MNG A+ F M+ +P V FV VL+ACSH GLV+
Sbjct: 337 DEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVD 396
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
G IF M R++R+EPQ+EHY CMVDLLGR G L+EA D+++ M M P+ + GTLL++
Sbjct: 397 FGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSA 456
Query: 591 CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVA 650
C+MHKN ++ E +A ++ +G+Y+LLS++YA+SG+W++AA+VR K G++K
Sbjct: 457 CKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEP 516
Query: 651 GQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G S IEV +IH F G+ + + E LEEL + +G P+ +++L ++
Sbjct: 517 GCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDI 570
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 218/459 (47%), Gaps = 53/459 (11%)
Query: 8 QPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAA 67
+PH S SNP S+ + + + LLQ+ + I+Q+ +H QLI G + F+
Sbjct: 32 KPHPNSNSNPK---SLKSLDQKQIIS---LLQRSRHINQVLPIHAQLIRNGHSQDPFMVF 85
Query: 68 RVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG 127
+L ++ + A +F+ + + L+ +++ VS+G Y A++LY +M
Sbjct: 86 ELLRSCSKCHAIDYASRIFQ---YTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHES 142
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
+L D + +++AC + R G+ VH+ L++GF N + ++ +Y K G++
Sbjct: 143 ILPDNYLMASILKACGSQLALRE----GREVHSRALKLGFSSNRLVRLRIMELYGKCGEL 198
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
D+ ++F+++ ++ ++ +M S ++ + A +F R+ + + V WT+++
Sbjct: 199 GDARRVFEEM-PEDVVASTVMISSYSDQGLVEEAGAVFSRVRRK----DTVCWTAMIDGF 253
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
R ++ F M+ + I VLS C+ L A +G+ +H ++ K E +
Sbjct: 254 VRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNL 313
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF-----S 362
FV NALI +Y + G + AQ +F E+++++++++N +I+ + G +A+E+F
Sbjct: 314 FVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGR 373
Query: 363 QLEKLD------------GG----------SMER-----PNVISWSAVIGAFASNGRGEE 395
+L + GG SM R P + + ++ GR EE
Sbjct: 374 RLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEE 433
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
A DL R M K+ + + + LLS C L +G ++
Sbjct: 434 AYDLIRTM---KMTPDHIMLGTLLSACKMHKNLELGEQV 469
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 180/380 (47%), Gaps = 49/380 (12%)
Query: 37 LLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L+ C + + + ++VH++ + G +++ + R++ +Y + G L DAR VFE P D
Sbjct: 153 ILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDV 212
Query: 94 KSSSLL---------------------------WNSILRVNVSNGLYENALKLYVKMRKL 126
+S+++ W +++ V N AL+ + M+
Sbjct: 213 VASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGE 272
Query: 127 GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ 186
V + FT V+ AC +G+ G+ VH+++ + + N+ + N LI MY++ G
Sbjct: 273 NVRPNEFTIVCVLSACSQLGAL----EIGRWVHSYMRKFEIELNLFVGNALINMYSRCGS 328
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
+ ++ +FD+++ ++ I++N M SG ++N A+ELF+ M L P VT+ +L++
Sbjct: 329 IDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNA 388
Query: 247 HARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE- 304
+ G ++ ++F M R +E E ++ + +G++ + + +
Sbjct: 389 CSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLG-----RVGRLEEAYDLIRTMKM 443
Query: 305 --DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV---SWNALITSYAEAGLCDEAVE 359
D++ + L+ H ++++ + + E+E++ ++ L YA +G EA +
Sbjct: 444 TPDHIML-GTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQ 502
Query: 360 VFSQLEKLDGGSMERPNVIS 379
V ++++ + G + P S
Sbjct: 503 VRAKMK--EAGMQKEPGCSS 520
Score = 46.6 bits (109), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 69/159 (43%), Gaps = 1/159 (0%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
++S+ S +N IH ++R +++ + LL KC ++ +F+ +
Sbjct: 52 IISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPN 111
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+ + ++I G+ +G A+ + M+ PD ++L AC + EGR +
Sbjct: 112 VYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHS 171
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
++ ++ M +L G+ G L +A + + MP
Sbjct: 172 RALKLGFSSNRLVRLRIM-ELYGKCGELGDARRVFEEMP 209
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 332 bits (850), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 180/560 (32%), Positives = 303/560 (54%), Gaps = 76/560 (13%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ +H H+ F+ ++ ++N ++ MYAK G + ++ LFDK+ K+ +SW ++ SG++
Sbjct: 124 GRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQ 183
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
+ AL LF +M G +PN T +SLL +
Sbjct: 184 SGQASEALALFPKMLHLGFQPNEFTLSSLLKA---------------------------- 215
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+DH G+ +H F +K G++ V V ++L+ +Y + ++ A+ +F+ +
Sbjct: 216 -------SGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLA 268
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
KN+VSWNALI +A G GE
Sbjct: 269 AKNVVSWNALIAGHARKG---------------------------------------EGE 289
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
+ LF +M T S +L+ CA S +L G+ +H HV++ + N L+
Sbjct: 290 HVMRLFXQMLRQGFEPTHFTYSSVLA-CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLI 348
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY K G +++ VF ++ K+D+++WNS+ISGY +GLG AL FE+M++A +P+ +
Sbjct: 349 DMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEI 408
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F++VL+ACSH+GL++EG+ F++M ++ +IE Q+ H+ +VDLLGRAG L EA+ ++
Sbjct: 409 TFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEE 467
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP++P A VWG LL +CRMHKN D+ A QIF L +G ++LLSNIYA++GR DA
Sbjct: 468 MPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDA 527
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
AKVR K G+KK SW+E++ ++H+F + + + + + E+++ +++ G V
Sbjct: 528 AKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYV 587
Query: 695 PDNDIILWEMMGKKNVKRIQ 714
PD +L+ M + ++Q
Sbjct: 588 PDTSHVLFFMNQQDRELKLQ 607
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 130/235 (55%), Gaps = 9/235 (3%)
Query: 45 HQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSIL 104
H +Q+H + G + + + + +L +YAR+ + +A+ +F + + + WN+++
Sbjct: 223 HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSL---AAKNVVSWNALI 279
Query: 105 RVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
+ G E+ ++L+ +M + G FT+ V+ AC GS G+ VH HV++
Sbjct: 280 AGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQ----GKWVHAHVIK 334
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
G Q +I N LI MYAK G + D+ K+F ++ ++ +SWN + SG+A + AL+L
Sbjct: 335 SGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQL 394
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG-AEAIAVV 278
F++M ++PN +T+ S+L++ + G L+E F++M+K IE A + VV
Sbjct: 395 FEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVV 449
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 91/173 (52%), Gaps = 2/173 (1%)
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
S +L+ C L GR IH H+ + ++++ N +LNMY KCG LEE +F+++
Sbjct: 109 SKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPT 168
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
KD+++W +ISGY +G ALA F +M+ GF+P+ ++L A + GR++
Sbjct: 169 KDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQL 228
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
++ + + + + ++D+ R ++EA I ++ + N W L+
Sbjct: 229 HAFSLK-YGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVVSWNALI 279
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 115/229 (50%), Gaps = 11/229 (4%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
++ Q K VH +I +G A++ ++ +YA+ G + DA+ VF K + WNS
Sbjct: 321 SLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL---VKQDIVSWNS 377
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
I+ +GL AL+L+ +M K V + TF V+ AC G + +++ H
Sbjct: 378 IISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHK 437
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMMFSGFALNFDCDGA 221
++ +V +V+ L+G + G+++++ K +++ +K + W + ++ + D
Sbjct: 438 IEAQVAHHVTVVD-LLG---RAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMD-- 491
Query: 222 LELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
L ++ ++ L+P+ LLS+ +A GRL + + MM++ G++
Sbjct: 492 LGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVK 540
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 332 bits (850), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 192/651 (29%), Positives = 330/651 (50%), Gaps = 83/651 (12%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFDCKSSSLLWNSILR 105
+ +H I G + F+ +L Y + G L AR VF E D ++ +N+++
Sbjct: 154 VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKD----AVTYNAMMM 209
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
GL+ AL+L+ MR+ G+ FTF ++ M G VH VL+
Sbjct: 210 GCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMA----HLLLGHQVHALVLRS 265
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
NV + N L+ Y+K + D +LFD++ ++ +S+N++ + +A N L LF
Sbjct: 266 TSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLF 325
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
+ M+ G + + + A +LSV L
Sbjct: 326 REMQKLGFDRQVLPY-----------------------------------ATMLSVAGSL 350
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
H+GK IH ++ G + NALI +Y K G + A++ FS EK+ +SW ALI
Sbjct: 351 PDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALI 410
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
T Y + G +EA+++FS + + + RP+ ++S++I A +S
Sbjct: 411 TGYVQNGQHEEALQLFSDMRR----AGLRPDRATFSSIIKASSS---------------- 450
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
A + +GR++H +++R ++ + L++MY KCGCL+E
Sbjct: 451 -------------------LAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDE 491
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
F+++ +++ I+WN++IS Y G +NA+ FE M+ GF PD V F++VL+ACSH
Sbjct: 492 ALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSH 551
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
GL +E + F +M ++ I P EHYAC++D LGR G + ++ MP + + +W
Sbjct: 552 NGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWT 611
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
++L+SCR+H N ++A A ++FG+ Y++LSNIYA +G+WEDAA V+ + +G
Sbjct: 612 SILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRG 671
Query: 646 LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
++K +G SW+E+K+KI+ F+S + + + + L+ L +M+ +G PD
Sbjct: 672 VRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPD 722
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 183/405 (45%), Gaps = 50/405 (12%)
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G + + +FD++ KN S N++ S ++ + D A LF L N TWT ++
Sbjct: 57 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF----LSSPHRNATTWTIMM 112
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
+HA GR + + LF M G+ + VL++ +H F IK G +
Sbjct: 113 RAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPS-----LHPFAIKFGLD 167
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
+VFV N L+ Y KHG + A+ +F E+ +K+ V++NA++ ++ GL +A++
Sbjct: 168 THVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQ----- 222
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
LF M+ A + A T S +L+V A
Sbjct: 223 ----------------------------------LFAAMRRAGIPATHFTFSSILTVAAG 248
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
A L +G ++H V+R + N+ V N LL+ Y KC CL++ +F+++ ++D +++N +
Sbjct: 249 MAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 308
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I+ Y N L F EM + GF + + +LS V+ G++I +V
Sbjct: 309 IAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL 368
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ A ++D+ + G+L A N E +A W L+
Sbjct: 369 ASEDLLGNA-LIDMYSKCGMLDAAKSNFSNRS-EKSAISWTALIT 411
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 183/367 (49%), Gaps = 30/367 (8%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
+H KQ+H QL++ G + L ++ +Y++ G L A++ F + S++ W ++
Sbjct: 353 VHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRS---EKSAISWTAL 409
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
+ V NG +E AL+L+ MR+ G+ D TF +I+A + G+ +H++++
Sbjct: 410 ITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLA----MIGLGRQLHSYLI 465
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
+ G++ +V + L+ MYAK G + ++ + FD++ +N ISWN + S +A + A++
Sbjct: 466 RSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIK 525
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVC 282
+F+ M G P+ VT+ S+L++ + G +E M F +M+ + I E A V+
Sbjct: 526 MFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVI--- 582
Query: 283 ADLAADHMGKV-----IHGFVIKGGFEDYVFVKNALI--C-VYGKHGDVKVAQNLFSEIE 334
D +G+V + +++ F+ + +++ C ++G +VA + +E
Sbjct: 583 -----DTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGME 637
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV---IGAFASNG 391
+ + L YA AG ++A V + D G + + + SW + I +FASN
Sbjct: 638 PTDATPYVILSNIYARAGQWEDAACVKKIMR--DRG-VRKESGYSWVEIKQKIYSFASND 694
Query: 392 RGEEALD 398
+D
Sbjct: 695 LTSPMID 701
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 133/295 (45%), Gaps = 22/295 (7%)
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
++K GF+ + N + G + A+ +F ++ KNI S N ++++Y+ +G A
Sbjct: 34 MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
+F S N +W+ ++ A A+ GR +AL LFR M V+ + VT++
Sbjct: 94 QHLFL--------SSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTT 145
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
+L++ + +H ++ ++ ++ V N LL+ Y K G L VF ++ KD
Sbjct: 146 VLNLPGCTVP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKD 200
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+T+N+M+ G GL AL F M AG F ++L+ + + G ++
Sbjct: 201 AVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHA 260
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN--------AYVW 584
+++R + + + ++D + L + + MP N AY W
Sbjct: 261 LVLRSTSVLNVFVNNS-LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAW 314
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 332 bits (850), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 206/750 (27%), Positives = 367/750 (48%), Gaps = 123/750 (16%)
Query: 28 NSLLDCFDH------------LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYAR 75
N+L DC+ + L + C + K +H +L+V+ A + ++A+++++Y
Sbjct: 39 NALQDCWKNGNESKEIDDVHTLFRYCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCY 98
Query: 76 FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY-VKMRKLGVLGDGFT 134
G + AR F+ WN ++ G ++ + + M G+ D T
Sbjct: 99 LGNVALARYTFDHIH---NRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRT 155
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
FP V++AC+ + G +H L+ GF +V++ LI +Y + G + ++ LF
Sbjct: 156 FPSVLKACR-------NVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILF 208
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL------------------------ 230
D++ ++ SWN M SG+ + + AL L +
Sbjct: 209 DEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMDSVTVVSLLSACTEAGDFNRGVT 268
Query: 231 -------EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI----------EVGAE 273
GLE L+ +A G L++ +FD M R + E+ +
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328
Query: 274 AIAVVL---------------------SVCADLAADHMGKVIHGFVI-KGGFEDYVFVKN 311
+ +L S+ + L + + GF + KG F + + + N
Sbjct: 329 PLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGN 388
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
A++ +Y K G V A+ +F+ + K+++SWN +I+ YA+ G EA+E+++ +E+ +GG
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEE-EGG- 446
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
++ AN T +L C+++ AL G
Sbjct: 447 -----------------------------------EISANQGTWVSVLPACSQAGALRQG 471
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
++HG +++ + ++ V L +MY KCG L++ +F QI + + + WN++I+ +G +
Sbjct: 472 MKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFH 531
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G GE A+ F+EM++ G KPD + FV +LSACSH+GLV+EG F+MM ++ I P ++H
Sbjct: 532 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKH 591
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
Y CMVDL GRAG L+ A + +K+MP++P+A +WG LL++CR+H N D+ + + +F +
Sbjct: 592 YGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 651
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
E G ++LLSN+YA++G+WE ++R KGL+K G S +EV K+ +F +GN
Sbjct: 652 PEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTH 711
Query: 672 SDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ + L L +++ G VPD+ +L
Sbjct: 712 PMYEEMYRELTALHEKLKMVGYVPDHRFVL 741
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
+F Q+ GG R + S AV+ F+++ + D ++ +K + + + L
Sbjct: 8 LFRQVPTCKGGRFTRV-LQSVGAVVREFSASANALQ--DCWKNGNESKEIDD---VHTLF 61
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
C L + +H +V + +N+ + L+N+Y G + F+ I +D+
Sbjct: 62 RYCTN---LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVY 118
Query: 480 TWNSMISGYGMNGLGENALATFEE-MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
WN MISGYG G + F M+ +G +PD F +VL AC + V +G +I +
Sbjct: 119 AWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDGNKIHCL 175
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
++ F + A ++ L R G + A + MP
Sbjct: 176 ALK-FGFMWDVYVAASLIHLYCRYGAVVNARILFDEMP 212
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 332 bits (850), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 189/576 (32%), Positives = 310/576 (53%), Gaps = 84/576 (14%)
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
T+ V++ C + S + G+ +H+ + + + + ++L+ MY G + + ++
Sbjct: 103 TYCSVLQLCADLKSIQD----GRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRI 158
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL--------------EPNFVT 239
FDKV + WN++ +G+A + +L LFKRM G+ + + ++
Sbjct: 159 FDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVIS 218
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
W S++S + G E+ +DLF+ M GI +A ++SV
Sbjct: 219 WNSMISGYVSNGLSEKGLDLFEQMLLLGINTD---LATMVSV------------------ 257
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
+ + N L+ +Y K G++ A +F + E+++VSW ++I YA GL D +V
Sbjct: 258 ------ELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVR 311
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
+F ++EK D + NS+T++ +L
Sbjct: 312 LFHEMEKED---------------------------------------LFPNSITMACIL 332
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
CA AAL G+EIHGH++R + + V N L++MY+KCG L L+F+ I +KDL+
Sbjct: 333 PACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLV 392
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+W MI+GYGM+G G A+A F EM +G +PD V+F+++L ACSH+GL++EG F+MM
Sbjct: 393 SWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMM 452
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
IEP+ EHYAC+VDLL RAG L +A +K MP+EP+A +WG LL CR++ + +
Sbjct: 453 RNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKL 512
Query: 600 AEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKR 659
AE +A +F L E TG Y+LL+NIYA + +WE+ K+R +GL+K G SWIE+K
Sbjct: 513 AEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKG 572
Query: 660 KIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
K+H+F +G+S + +L++ +M+ +G P
Sbjct: 573 KVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFP 608
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 166/341 (48%), Gaps = 17/341 (4%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+L +Y++ G L A VFET + S + W S++ GL + +++L+ +M K +
Sbjct: 265 LLDMYSKSGNLNSAIQVFETMG---ERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDL 321
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ T ++ AC + + GQ +H H+L+ GF + H+ N L+ MY K G +
Sbjct: 322 FPNSITMACILPACASLAAL----ERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALG 377
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ LFD + K+ +SW +M +G+ ++ A+ F M G+EP+ V++ S+L + +
Sbjct: 378 LARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS 437
Query: 249 RCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
G L+E F+MMR IE +E A ++ + A A ++ K + F+ E
Sbjct: 438 HSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLA--RAGNLSKA-YKFIKMMPIEPDA 494
Query: 308 FVKNALICVYGKHGDVKVAQNLFS---EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
+ AL+C + DVK+A+ + E+E +N + L YAEA ++ EV
Sbjct: 495 TIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEA---EKWEEVKKLR 551
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
E++ + + SW + G G+ + L K++L
Sbjct: 552 ERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIEL 592
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 175/407 (42%), Gaps = 65/407 (15%)
Query: 16 NPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYAR 75
+P + TY + L C D K+I +++H+ + L ++++ +Y
Sbjct: 94 SPKPDLELRTYCSVLQLCAD-----LKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVT 148
Query: 76 FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV------- 128
G L + R +F+ LWN ++ G + +L L+ +MR+LG+
Sbjct: 149 CGDLREGRRIFDKV---ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESAR 205
Query: 129 -LGDGFTFPLVIRACKFMGSFRFR--FSFGQIVHNHVLQMGFQGNVHIV--------NEL 177
L D VI + + G + +L +G ++ + N L
Sbjct: 206 KLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCL 265
Query: 178 IGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNF 237
+ MY+K G ++ + ++F+ + ++ +SW M +G+A D ++ LF ME E L PN
Sbjct: 266 LDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNS 325
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
+T +A +L CA LAA G+ IHG
Sbjct: 326 IT-----------------------------------MACILPACASLAALERGQEIHGH 350
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
+++ GF V NAL+ +Y K G + +A+ LF I EK++VSW +I Y G EA
Sbjct: 351 ILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEA 410
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+ F+++ S P+ +S+ +++ A + +G +E F M+
Sbjct: 411 IAAFNEMRN----SGIEPDEVSFISILYACSHSGLLDEGWGFFNMMR 453
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 108/275 (39%), Gaps = 67/275 (24%)
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
+ ++ I F G A++L Q K T +L +CA+ ++ GR IH
Sbjct: 68 ITDYNIEICRFCELGNLRRAMELIN--QSPKPDLELRTYCSVLQLCADLKSIQDGRRIHS 125
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI--EK------------------- 475
+ + + ++ + L+ MY+ CG L EG +F+++ EK
Sbjct: 126 IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRE 185
Query: 476 ----------------------------KDLITWNSMISGYGMNGLGENALATFEEMIEA 507
+D+I+WNSMISGY NGL E L FE+M+
Sbjct: 186 SLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLL 245
Query: 508 GFKPDGVAFVAV---LSAC-----SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
G D V+V L+ C S +G +N ++F+ M E + + M+
Sbjct: 246 GINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMG-----ERSVVSWTSMIAGY 300
Query: 560 GRAGLLQEASDIVKNMPME---PNAYVWGTLLNSC 591
R GL + + M E PN+ +L +C
Sbjct: 301 AREGLSDMSVRLFHEMEKEDLFPNSITMACILPAC 335
>gi|255558480|ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540484|gb|EEF42051.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 681
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 191/594 (32%), Positives = 313/594 (52%), Gaps = 28/594 (4%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
V+S +A+ G L A+ +F P + + + WNS++ NG A+ L+ ++ +
Sbjct: 110 VISGFAKAGELDVAKKLFNEMP---RRNGVAWNSMIHGYARNGFAREAVGLFKELNSNPL 166
Query: 129 ---LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
GD F VI AC +G+ + G+ VH +L + + +++ LI +YAK G
Sbjct: 167 EKSCGDTFVLASVIGACADLGAIEY----GKQVHARILMDDVELDSVLISSLINLYAKCG 222
Query: 186 QMSDS---FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
+ + K+ D+V + S + + G+A A+ +F+ P FV W S
Sbjct: 223 HLDTANYVLKMMDEV---DDFSLSALIMGYANCGRMSDAVRIFRTKS----NPCFVVWNS 275
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
L+S + + L + M+ ++V + I V+LS C+ K +HG+V K G
Sbjct: 276 LISGYVNNHEEMKAFALVNEMKNNRVQVDSSTITVILSACSSTGNAQYAKQMHGYVCKVG 335
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
D V V +A I Y K + A LFSE++ + V N++IT+Y G +A +F
Sbjct: 336 LIDSVIVASAFIDAYSKCRNPNDACKLFSELKAYDTVLLNSMITAYCNCGRIRDAKNIFE 395
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
+M ++ISW+++I A N EALD+F KM + + +++ ++S C
Sbjct: 396 --------TMPSKSLISWNSIIVGLAQNAYPLEALDVFGKMNKLDLRMDRFSLASVISAC 447
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A ++L +G ++ + + + V L++ Y KCG +E G +F+ + K D ++WN
Sbjct: 448 ACISSLELGEQVFARAIITGLESDQAVSTSLVDFYCKCGFIENGRKLFDSMIKTDEVSWN 507
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
SM+ GY NG G L F EM +AG +P + F VLSAC H GLV EGR+ F++M +
Sbjct: 508 SMLMGYATNGYGLETLTLFNEMKQAGLRPTDITFTGVLSACDHCGLVEEGRKWFNIMKYD 567
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
+ I+P +EHY+CMVDL RAG L+EA ++V++MP E + +W ++L C H + D+ +
Sbjct: 568 YHIDPGIEHYSCMVDLFARAGCLKEALNLVEHMPFEADCSMWSSVLRGCVAHGDKDLGKK 627
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
+A QI L E++ +Y+ LS I+A SG WE +A VR K +KK G SW +
Sbjct: 628 VAQQIIQLNPESSSAYVQLSGIFATSGDWESSALVRKIMTEKQVKKHPGFSWAD 681
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 202/448 (45%), Gaps = 48/448 (10%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N +I Y ++G S KLFD + KN SWN++ SGFA + D A +LF M
Sbjct: 77 NTMIEGYMRVGDKERSLKLFDLMPQKNDYSWNVVISGFAKAGELDVAKKLFNEMP----R 132
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE---AIAVVLSVCADLAADHMG 291
N V W S++ +AR G E + LF + +E +A V+ CADL A G
Sbjct: 133 RNGVAWNSMIHGYARNGFAREAVGLFKELNSNPLEKSCGDTFVLASVIGACADLGAIEYG 192
Query: 292 KVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEA 351
K +H ++ E + ++LI +Y K G + A + ++E + S +ALI YA
Sbjct: 193 KQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLKMMDEVDDFSLSALIMGYANC 252
Query: 352 GLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVAN 411
G +AV +F + P + W+++I + +N +A L +M+ +V +
Sbjct: 253 GRMSDAVRIFR--------TKSNPCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRVQVD 304
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK------------ 459
S TI+ +LS C+ + +++HG+V +V + +++V + ++ Y K
Sbjct: 305 SSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSKCRNPNDACKLFS 364
Query: 460 -------------------CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
CG + + +FE + K LI+WNS+I G N AL
Sbjct: 365 ELKAYDTVLLNSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLAQNAYPLEALDV 424
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F +M + + D + +V+SAC+ + G ++F + +E +VD
Sbjct: 425 FGKMNKLDLRMDRFSLASVISACACISSLELGEQVFARAIIT-GLESDQAVSTSLVDFYC 483
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ G ++ + +M ++ + W ++L
Sbjct: 484 KCGFIENGRKLFDSM-IKTDEVSWNSML 510
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 164/409 (40%), Gaps = 99/409 (24%)
Query: 155 GQIVHNHVLQMGF-QGNVHIVNELIGMYAKMG-QMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H L+ G V + N L+ MYA+ G M+D+ LFD++
Sbjct: 24 GKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDAHNLFDEMP-------------- 69
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
E N +W +++ + R G E ++ LFD+M ++
Sbjct: 70 ---------------------ERNCFSWNTMIEGYMRVGDKERSLKLFDLMPQK------ 102
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
DY + N +I + K G++ VA+ LF+E
Sbjct: 103 -------------------------------NDYSW--NVVISGFAKAGELDVAKKLFNE 129
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP--NVISWSAVIGAFASN 390
+ +N V+WN++I YA G EAV +F ++L+ +E+ + ++VIGA A
Sbjct: 130 MPRRNGVAWNSMIHGYARNGFAREAVGLF---KELNSNPLEKSCGDTFVLASVIGACADL 186
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
G E + ++ + V +SV IS L+++ A+ L+ +V+++ +
Sbjct: 187 GAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTAN----YVLKMMDEVDDFSL 242
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
+ L+ Y CG + + +F + WNS+ISGY N A A EM +
Sbjct: 243 SALIMGYANCGRMSDAVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRVQ 302
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
D +LSACS G + QM Y C V L+
Sbjct: 303 VDSSTITVILSACSSTGNAQYAK--------------QMHGYVCKVGLI 337
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 331 bits (849), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 203/709 (28%), Positives = 352/709 (49%), Gaps = 63/709 (8%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
L C+ + Q++QVH Q V G + +A +++ Y+ + L DA +F+ C S
Sbjct: 88 LVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGM---CVRDS 144
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
+ W+ ++ G Y N + ++ + G D +T P VIRAC+ + + + +
Sbjct: 145 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMALVDMYV 204
Query: 158 VHNHVLQMGF------QGNVHIVNELIGMYAKMGQMSDSFKLFDKVR------------- 198
+ F + ++ +IG YA+ G+ ++S LF+K+R
Sbjct: 205 KCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVT 264
Query: 199 ----------------VKNYIS----------WNMMFSGFALNFDCDGALELFKRMELEG 232
+ +YI M +A + A E+F RME
Sbjct: 265 VVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRME--- 321
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
E N ++W+++++++ G+ + +DLF MM G+ +A +L C + +
Sbjct: 322 -EKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVR 380
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+H G + V N L+ Y + + A LF + ++ VSW+ ++ +A+ G
Sbjct: 381 QVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVG 440
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
F +L + RP+ + G E+L LF KM+ VV +
Sbjct: 441 DYMNCFGTFRELIRCGA----RPDNYT-------LPFCGNANESLVLFDKMREEGVVPDK 489
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
V + ++ CA+ A++ R I ++ R ++++ +++M+ KCGC+E +F++
Sbjct: 490 VAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDR 549
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+E+K++I+W++MI+ YG +G G AL F M+ +G P+ + V++L ACSHAGLV EG
Sbjct: 550 MEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEG 609
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
R F +M ++ + ++HY C+VDLLGRAG L EA ++++M +E + +WG L +CR
Sbjct: 610 LRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACR 669
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
HK+ +AE A+ + L + G Y+LLSNIYA +GRWED AK R + LKK+ G
Sbjct: 670 THKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGW 729
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+WIEV K H FS G++ K + E+L+ L ++E G VPD + +L
Sbjct: 730 TWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVL 778
>gi|224107543|ref|XP_002314516.1| predicted protein [Populus trichocarpa]
gi|222863556|gb|EEF00687.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 331 bits (849), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 209/670 (31%), Positives = 343/670 (51%), Gaps = 89/670 (13%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
K++ +Q H +++ G + FLA +++S YA FG +R VF++ F S LWN
Sbjct: 41 KSLKLTQQCHARILSLGFTQNPFLATKLISAYAIFGVPALSRLVFDSLHF---KSVYLWN 97
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
S++ V N Y A + +M GVL D +T + + C +G + G+++H
Sbjct: 98 SLINGFVKNRAYNEAFGWFYQMCCRGVLLDDYTLATMSKVCHEIGDL----NAGKLIHGK 153
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA----LNFD 217
L+ GF +V + N L+ MY+K G + KLFD++ +N SWN++ SG+A NFD
Sbjct: 154 SLKTGFVLDVIVANSLMSMYSKCGGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFD 213
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
+ + K M++EGL+P+ T +SLL+ C M KR
Sbjct: 214 KEVS-GFVKDMQIEGLKPDAFTVSSLLT---LCN---------GHMGKR----------- 249
Query: 278 VLSVCADLAADHMGKVIHGFVIK----GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
DH G+ +HGF+++ G V + LI +Y + V V + +F +
Sbjct: 250 ----------DH-GRELHGFIVRIELAVGSGTEVHLGCCLIDMYSRSNRVDVGRRVFDRM 298
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
E +N+ +W A+I + + G +E + +F +++ DG
Sbjct: 299 ECRNVYAWTAMINGHVQNGALEEGLVLFHEMQVRDG------------------------ 334
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
V N V++ +L C+ A L ++IHG+ +R N ++ + N L
Sbjct: 335 --------------VEPNKVSLVSVLPACSAVAGLTGVKQIHGYAIRKQFNNDVSLCNAL 380
Query: 454 LNMYMKCGCLEEGHLVFEQIE-KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
++MY KCG L+ VFE ++D I+W+SMISGYG++G GE A+ + +M++ G KPD
Sbjct: 381 IDMYSKCGSLDHAKQVFEFGSFRRDPISWSSMISGYGLHGKGEEAVFVYNKMLQLGNKPD 440
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
+ V VLSACS AGLV+EG I+ + ++RI+P +E AC+VD+LGR+G L +A D +
Sbjct: 441 MITIVGVLSACSRAGLVDEGLCIYKSAINKYRIKPTVEICACVVDMLGRSGQLGQALDYI 500
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
K MPMEP+ VWG ++++ +H N+++ + + L E +Y+ LSN++A+S RW+
Sbjct: 501 KTMPMEPSPSVWGAVVSASIIHGNSEMQDLAYRFLVQLEPENPSNYVSLSNLHASSRRWD 560
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
++VR K + L K G SWI + H F + + L K++ E+L L L M+
Sbjct: 561 VVSEVRTMMKDRCLTKTPGCSWISINNTTHFFYAADKLHPCSKSIYELLGGLILLMKGPA 620
Query: 693 CVPDNDIILW 702
D + W
Sbjct: 621 VSHDFENFTW 630
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 331 bits (849), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 211/724 (29%), Positives = 351/724 (48%), Gaps = 116/724 (16%)
Query: 37 LLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LL++C K++ Q K VH +++ G + L ++++Y AR VFE D
Sbjct: 9 LLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFEN--IDI 66
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV-LGDGFTFPLVIRACKFMGSFRFRF 152
+S +WNS++ N ++ + LK++ ++ + + D FT+P VI+A +G R
Sbjct: 67 RSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALG----RE 122
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+++H V++ G +V + + L+GMYAK DS ++FD++ ++ SWN + S F
Sbjct: 123 FLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSF 182
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWT------------------------------- 241
D + ALELF RME EPN V+ T
Sbjct: 183 YQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFELDE 242
Query: 242 ----SLLSSHARCGRLEETMDLFDMMRKR------------------------------- 266
+L+ + RC LE ++F MR++
Sbjct: 243 YVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIE 302
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
G + +L C+ GK +HG+VI+ + +++ +LI +Y K G+VK+A
Sbjct: 303 GTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLA 362
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+ +F + + K++V SW+ +I
Sbjct: 363 ETVFLKTQ-KDVVE--------------------------------------SWNVMISG 383
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
+ S G +A+D++ +M V + VT + +LS C++ AAL G++IH + + +
Sbjct: 384 YVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETD 443
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
L+ + LL+MY KCG ++E +F I KKD+++W MIS YG +G AL F+EM +
Sbjct: 444 ELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQK 503
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
G KPDGV F+AVLSAC HAGL++EG + F M ++ IE +E Y+C++D+LGRAG L
Sbjct: 504 FGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLL 563
Query: 567 EASDIVKNMP-MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
EA I++ P NA + TL +C +H++ + +A + + +Y +L N+Y
Sbjct: 564 EAYGILQQKPETRDNAELLSTLFCACCLHRDHLLGYTIAKLLVEKYPDDASTYTVLFNLY 623
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A+ W+ A +VR+ K G++K G SWIE+ K+ F + + +NV E L L+
Sbjct: 624 ASGESWDAAKRVRLKMKEVGMRKKPGCSWIEMNEKVCHFFAEDRSHPQAENVYECLALLS 683
Query: 686 LQME 689
ME
Sbjct: 684 GHME 687
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 152/350 (43%), Gaps = 27/350 (7%)
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE-K 475
LL C + +L + +H ++ V + ++++ L+N+Y C LVFE I+ +
Sbjct: 8 SLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENIDIR 67
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGF-KPDGVAFVAVLSACSHAGLVNEGRR 534
D+ WNS++SGY N + + L F+ ++ PD + V+ A G GR
Sbjct: 68 SDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLGRM 127
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
I ++V+ + + + +V + + L +++ + MP E + W T+++S +
Sbjct: 128 IHTVVVKSGHV-CDVVVASSLVGMYAKFNLFEDSVQVFDEMP-ERDVASWNTVISS--FY 183
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
+ D +A+ ++FG + + +S A S A R+ +G K++ +
Sbjct: 184 QRGDAEKAL--ELFGRMERSDFEPNSVSITVAIS------ACSRLLCLERG-KEIHRKY- 233
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLE---ELALQMENKGCVPDNDIILWEMMGKKNVK 711
+K++ + NS D+ C+ LE E+ QM K ++ W M + V
Sbjct: 234 --LKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKS------LVAWNSMIRGYVA 285
Query: 712 RIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRSTNGQLMKNKLKLGLVV 761
R + ++ I G R + L +L S + L+ K G V+
Sbjct: 286 RGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVI 335
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 331 bits (849), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 181/560 (32%), Positives = 306/560 (54%), Gaps = 75/560 (13%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ +H H+ F+ ++ ++N ++ MYAK G + ++ LFDK+ K+ +SW ++ SG++
Sbjct: 124 GRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQ 183
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
+ AL LF +M G +PN T +SLL +
Sbjct: 184 SGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTG------------------------ 219
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+DH G+ +H F +K G++ V V ++L+ +Y + ++ A+ +F+ +
Sbjct: 220 -----------PSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLA 268
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
KN+VSWNALI +A G + + +F Q+ L G P ++S+V A
Sbjct: 269 AKNVVSWNALIAGHARKGEGEHVMRLFLQM--LRQGF--EPTHFTYSSVFTA-------- 316
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
CA S +L G+ +H HV++ + N L+
Sbjct: 317 ---------------------------CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLI 349
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY K G +++ VF ++ K+D+++WNS+ISGY +GLG AL FE+M++A +P+ +
Sbjct: 350 DMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEI 409
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F++VL+ACSH+GL++EG+ F++M ++ +IE Q+ H+ +VDLLGRAG L EA+ ++
Sbjct: 410 TFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEE 468
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP++P A VWG LL SCRMHKN D+ A QIF L +G ++LLSNIYA++GR DA
Sbjct: 469 MPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDA 528
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
AKVR K G+KK SW+E++ ++H+F + + + + + E+++ +++ G V
Sbjct: 529 AKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGKIKEIGYV 588
Query: 695 PDNDIILWEMMGKKNVKRIQ 714
PD +L+ M + ++Q
Sbjct: 589 PDTSHVLFFMNQQDRELKLQ 608
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 130/235 (55%), Gaps = 8/235 (3%)
Query: 45 HQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSIL 104
H +Q+H + G + + + + +L +YAR+ + +A+ +F + + + WN+++
Sbjct: 223 HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSL---AAKNVVSWNALI 279
Query: 105 RVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
+ G E+ ++L+++M + G FT+ V AC GS G+ VH HV++
Sbjct: 280 AGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQ----GKWVHAHVIK 335
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
G Q +I N LI MYAK G + D+ K+F ++ ++ +SWN + SG+A + AL+L
Sbjct: 336 SGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQL 395
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG-AEAIAVV 278
F++M ++PN +T+ S+L++ + G L+E F++M+K IE A + VV
Sbjct: 396 FEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVV 450
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 91/173 (52%), Gaps = 2/173 (1%)
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
S +L+ C L GR IH H+ + ++++ N +LNMY KCG LEE +F+++
Sbjct: 109 SKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPT 168
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
KD+++W +ISGY +G ALA F +M+ GF+P+ ++L A + GR++
Sbjct: 169 KDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQL 228
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
++ + + + + ++D+ R ++EA I ++ + N W L+
Sbjct: 229 HAFSLK-YGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAK-NVVSWNALI 279
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 115/229 (50%), Gaps = 11/229 (4%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
++ Q K VH +I +G A++ ++ +YA+ G + DA+ VF K + WNS
Sbjct: 322 SLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL---VKQDIVSWNS 378
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
I+ +GL AL+L+ +M K V + TF V+ AC G + +++ H
Sbjct: 379 IISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHK 438
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMMFSGFALNFDCDGA 221
++ +V +V+ L+G + G+++++ K +++ +K + W + ++ + D
Sbjct: 439 IEAQVAHHVTVVD-LLG---RAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMD-- 492
Query: 222 LELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
L ++ ++ L+P+ LLS+ +A GRL + + MM++ G++
Sbjct: 493 LGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVK 541
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 331 bits (849), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 197/663 (29%), Positives = 328/663 (49%), Gaps = 94/663 (14%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD---C 93
LL+QC + L+Q+H Q + + L ++ +S+ + T F
Sbjct: 27 LLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSISL---------KDFTYSTLIFSHITP 77
Query: 94 KSSSLLWNSILRVNVSNGL-YENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ +N +LR + Y L LY +M+ L + + FTFP V AC + R
Sbjct: 78 HPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRM-- 135
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
++ H V ++G + H VN ++ MY + G+ + K+FD++
Sbjct: 136 --ARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEIT-------------- 179
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVG 271
E + V+W SLLS +A+ G E +++F +R+ G E
Sbjct: 180 ---------------------EKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPD 218
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
++ VL C +L +G+ + GFV++ G + ++ +ALI +Y K G++ ++ +F
Sbjct: 219 EMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIF- 277
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
DG M + I+W+A I A+A NG
Sbjct: 278 ------------------------------------DG--MPSRDFITWNAAISAYAQNG 299
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
+EA+ LF M+ V N VT++ +LS CA AL++G+++ + + +I V
Sbjct: 300 MADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVAT 359
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG--F 509
L++MY KCG LE VF + +K+ +WN+MIS +G + AL+ FE M + G
Sbjct: 360 ALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSA 419
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
+P+ + FV++LSAC HAGLV+EG R+FDMM F + P++EHY+CMVDLL RAG L EA
Sbjct: 420 RPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAW 479
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASG 629
D+++ MP +P+ G L ++C+ KN D+ E + + L +G+Y++ S IY
Sbjct: 480 DVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLN 539
Query: 630 RWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
W+DAA++R + G+ K G SWIEV ++ F SG+ L D +V +++ L +++
Sbjct: 540 MWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDGLTLDSIDVRNIIDLLYEELK 599
Query: 690 NKG 692
+G
Sbjct: 600 KEG 602
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 184/404 (45%), Gaps = 62/404 (15%)
Query: 6 LHQPHQ-----FSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGAN 60
LH HQ SP+N + PF + N + I + H ++ G +
Sbjct: 102 LHLYHQMKTLNISPNNFTFPFVFLACAN------------LEEIRMARLAHCEVFKLGLD 149
Query: 61 ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY 120
++++Y R G AR VF+ + + WNS+L G A++++
Sbjct: 150 NDHHTVNSMVTMYFRCGENGVARKVFDEI---TEKDLVSWNSLLSGYAKLGFAREAVEVF 206
Query: 121 VKMRK-LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
++R+ G D + V+ AC +G G+ V V++ G + N +I + LI
Sbjct: 207 GRLREESGFEPDEMSLVSVLGACGELGDLEL----GRWVEGFVVERGMKVNSYIGSALIS 262
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MY+K G++ S ++FD + +++I+WN S +A N D A+ LF M+ G++PN VT
Sbjct: 263 MYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVT 322
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
T++LS+ CA + A +GK + +
Sbjct: 323 LTAVLSA-----------------------------------CASIGALDLGKQMDEYAT 347
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
G + +FV ALI +Y K G ++ AQ +F+++ KN SWNA+I++ A G EA+
Sbjct: 348 HRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALS 407
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+F ++ D G RPN I++ +++ A G +E LF M
Sbjct: 408 LFERMS--DEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMM 449
>gi|297741948|emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 331 bits (849), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 287/531 (54%), Gaps = 44/531 (8%)
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
+I Y + G+++ + LF+ + K N + N M +G+A N D A LF M + L
Sbjct: 1 MITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDL-- 58
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
V+W S+L+ + R G + + F+ M +R + V +L D
Sbjct: 59 --VSWNSMLTGYTRNGEMRLGLQFFEEMAERDV------------VSWNLMVD------- 97
Query: 296 GFV----IKGGFEDYVFVKNA-------LICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
GFV + +E + + N ++C + + G + A+ LF ++ +N+V+WNA+
Sbjct: 98 GFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAM 157
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
I +Y + DEA+ +F + M N ISW+ VI + G+ +EA L +M
Sbjct: 158 IAAYVQNCHVDEAISLFME--------MPEKNSISWTTVINGYVRMGKLDEARQLLNQMP 209
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
S GL S CA AAL +G+++H V++ ++ V N L+ MY KCG +
Sbjct: 210 YRNKPDQSTFACGL-SSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSIS 268
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
L+F+ I+ D+++WNS+I+ Y +NG G AL F +M G PD V FV +LSACS
Sbjct: 269 SAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACS 328
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
H GL+++G ++F MV+ + IEP EHYACMVDLLGRAG L+EA +V+ M + NA +W
Sbjct: 329 HVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIW 388
Query: 585 GTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTK 644
G LL +CR+H N ++A+ A ++ T +Y+LLSN+ A +GRW++ A+VR K K
Sbjct: 389 GALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEK 448
Query: 645 GLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
G +K G SWIE++ ++H F S + +C +L L M N G +P
Sbjct: 449 GAEKQPGWSWIELQNRVHAFLSEDPAHPRAVELCHILRSLTAHMRNTGDMP 499
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 162/347 (46%), Gaps = 53/347 (15%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR-------- 124
+ARFG++ +AR +F+ P + + WN+++ V N + A+ L+++M
Sbjct: 130 FARFGKIAEARRLFDQMPI---RNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWT 186
Query: 125 -------KLGVL---------------GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
++G L D TF + +C + + + G+ +H V
Sbjct: 187 TVINGYVRMGKLDEARQLLNQMPYRNKPDQSTFACGLSSCAHLAALQV----GKQLHQLV 242
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
++ G+ ++ + N LI MYAK G +S + LF + + +SWN + + +ALN + AL
Sbjct: 243 MKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREAL 302
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSV 281
+LF +ME+EG+ P+ VT+ +LS+ + G +++ + LF M++ IE AE A ++ +
Sbjct: 303 KLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDL 362
Query: 282 CADLAADHMGKVIHGFVIKGGFE--DYVFVKNALICVYGKHGDV---KVAQNLFSEIEEK 336
G++ F + G + + AL+ HG++ K A E E
Sbjct: 363 LG-----RAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPH 417
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
++ L AEAG DE V ++ + G+ ++P WS +
Sbjct: 418 KTSNYVLLSNMQAEAGRWDEVARVRRLMK--EKGAEKQP---GWSWI 459
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 108/232 (46%), Gaps = 26/232 (11%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFDCKSSSLLWNSILRV 106
KQ+H ++ +G F++ ++++YA+ G + A +F + FD S WNS++
Sbjct: 236 KQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVS----WNSLIAA 291
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS-FGQIVHNHVLQM 165
NG ALKL+ KM GV D TF ++ AC +G F +V +
Sbjct: 292 YALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAY---- 347
Query: 166 GFQGNVHIVNE----LIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDG 220
N+ + E ++ + + G++ ++F+L +++ N W + ++ G
Sbjct: 348 ----NIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIH----G 399
Query: 221 ALEL--FKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
LEL F +L EP+ + LLS+ A GR +E + +M+++G E
Sbjct: 400 NLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAE 451
>gi|302782465|ref|XP_002973006.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
gi|300159607|gb|EFJ26227.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
Length = 698
Score = 331 bits (849), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 196/636 (30%), Positives = 333/636 (52%), Gaps = 29/636 (4%)
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG--VL 129
+Y GRL DAR VF++ P + W I+ V G + AL LY + + +
Sbjct: 1 MYRDCGRLEDARAVFDSMPL---RNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQ 57
Query: 130 GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD 189
D F F V+ AC + G +H +++ G + +V + N L+ MYAK G++
Sbjct: 58 ADAFIFSSVLAACARLKCL----EQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDR 113
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
+ ++FD++ ++ +SWN M S A + AL++++ M + + + W++++S+ A
Sbjct: 114 AKQVFDRITHRDVVSWNAMVSANAEAGHLEVALKIYQEM----VSADVLCWSTMISAEAM 169
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFV 309
G E ++L+ M + A +A VL+ C L G ++ I+ G + V
Sbjct: 170 AGHDREALELYREM-ILSVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVV 228
Query: 310 KNALICVYGKHGDVKVAQN-LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
L+ +Y + GDV A+ LF ++++ +VSWNA++T++A+ DEA ++F +
Sbjct: 229 GTTLVNLYARFGDVIAAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFRE----- 283
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
M +VISW+A+I F NGR ++AL+LFR+M L + + +T +L CA A
Sbjct: 284 ---MPDKSVISWNAMIAGFGQNGRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTAS 340
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
++GR I + ++ K+I V N + NMY KCG E F ++ +D+++W ++I+ Y
Sbjct: 341 SLGRFICDGMDE-ALAKDISVANSICNMYGKCGLPELARQTFLEMTYRDVVSWTAIIAAY 399
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR--EFRIE 546
NG AL F M++AG +P+G+ + LSACSH L +EG IF +V + +
Sbjct: 400 SQNGYSSEALDIFRIMVQAGVEPNGITLINTLSACSHGALFDEGSDIFSSLVSGDYYGVT 459
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
H+ C +DLLGRAG L++A ++ MP + A W +LL++CR ++ A +A+
Sbjct: 460 ANESHFLCAIDLLGRAGYLKDAETLITKMPFKAGAVAWTSLLSACRTFRDLKRAGRVANH 519
Query: 607 IFGLITET---TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHM 663
+F L + Y++LSNIYA++G K+R + K KK+ G+S I +K + +
Sbjct: 520 LFELDESSIKDPAPYVMLSNIYASAGDRAAEMKLRDQIRIKCRKKLPGKSTITIKGQTNE 579
Query: 664 FSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDI 699
F S + + L L +M+ G VPD I
Sbjct: 580 FYSLDETHPRRDDAYNELRRLFQKMKEAGYVPDTRI 615
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 119/515 (23%), Positives = 222/515 (43%), Gaps = 103/515 (20%)
Query: 34 FDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L C + L+Q +H +++ G L ++++YA+ GR+ A+ VF+
Sbjct: 63 FSSVLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDRIT 122
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK------------------------- 125
+ WN+++ N G E ALK+Y +M
Sbjct: 123 ---HRDVVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALEL 179
Query: 126 -----LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
L V + T V+ AC +G S G +V + +Q G + + L+ +
Sbjct: 180 YREMILSVRPNASTLATVLAACTRLGD----LSSGALVRDGAIQSGLDRDAVVGTTLVNL 235
Query: 181 YAKMGQMSDSFK-LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
YA+ G + + + LFD ++ + +SWN M + FA N D A +LF+ M + + ++
Sbjct: 236 YARFGDVIAAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMP----DKSVIS 291
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
W ++++ + GR ++ ++LF M G++ VL CA+L A +G+ I +
Sbjct: 292 WNAMIAGFGQNGRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGRFICDGMD 351
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
+ +D + V N++ +YGK G ++A+ F E+ +++VSW A+I +Y++ G EA
Sbjct: 352 EALAKD-ISVANSICNMYGKCGLPELARQTFLEMTYRDVVSWTAIIAAYSQNGYSSEA-- 408
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
LD+FR M A V N +T+ L
Sbjct: 409 -------------------------------------LDIFRIMVQAGVEPNGITLINTL 431
Query: 420 SVCAESAALNIGREIHGHVVR-----VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
S C+ A + G +I +V V+ N++ + +++ + G L++ + ++
Sbjct: 432 SACSHGALFDEGSDIFSSLVSGDYYGVTANESHFL--CAIDLLGRAGYLKDAETLITKMP 489
Query: 475 -KKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
K + W S++S A TF ++ AG
Sbjct: 490 FKAGAVAWTSLLS----------ACRTFRDLKRAG 514
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 215/746 (28%), Positives = 371/746 (49%), Gaps = 74/746 (9%)
Query: 48 KQVHNQLIVTGAN-ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
+Q+H + G + A + ++ +Y + G + D R VFE P K + + W S+L
Sbjct: 119 EQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMP---KRNVVTWTSLLTG 175
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
V + + L+ +MR GV + FTF V+ A G+ G+ VH ++ G
Sbjct: 176 YVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAV----DLGRRVHAQSVKFG 231
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+ V + N LI MY+K G + ++ +F ++ ++ +SWN + +G LN AL+LF
Sbjct: 232 CRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFH 291
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL---SVCA 283
+ + T+++++ A +L L + K G + ++ S C
Sbjct: 292 DSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCG 351
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN------ 337
+L + F++ G ++ V A+I ++ D+ +A LFS + E N
Sbjct: 352 EL-----DDAFNIFLLMPGSQN-VVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEF 405
Query: 338 --------------------IVSWN---------ALITSYAEAGLCDEAVEVFSQLEKLD 368
I+ N AL+ SY++ G +EA+ +F ++ D
Sbjct: 406 TYSTVLTASIPILLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKD 465
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE-SAA 427
V++WSA++ ++ G + A ++F KM + + N TIS + CA +A
Sbjct: 466 --------VVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAG 517
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
++ GR+ H ++ I V + L+ MY + G ++ +VFE+ +DL++WNSMISG
Sbjct: 518 IDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISG 577
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
Y +G + AL TF +M G + DG F+AV+ C+HAGLV EG++ FD MV + I P
Sbjct: 578 YAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISP 637
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
MEHY+CMVDL RAG L E ++++ MP A VW TLL +CR+HKN ++ + A ++
Sbjct: 638 TMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKL 697
Query: 608 FGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG 667
L + + +Y+LLSNIYAA+GRW++ +VR +K +KK AG SWI++K K+H F +
Sbjct: 698 LLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFIAC 757
Query: 668 NSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHRI 727
+ + + L+ + +++ +G P+ ++L ++ A+ K +
Sbjct: 758 DKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDI-------------AEEQKETMLV 804
Query: 728 VGFRNLKLGLRLLLSLRSTNGQLMKN 753
+ L L L+ + T Q++KN
Sbjct: 805 MHSERLALAFGLIATPPRTPLQIVKN 830
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 161/346 (46%), Gaps = 53/346 (15%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ +++ C + QL +Q+H+ ++ G ++ + ++ Y++ G L DA N+F P
Sbjct: 305 YSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMP 364
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + W +++ + N A L+ +MR+ V + FT+ V+ A
Sbjct: 365 G--SQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTA-------SI 415
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
QI H +++ +Q + L+ Y+K+G ++ +F + K+ ++W+ M S
Sbjct: 416 PILLPQI-HAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLS 474
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
++ DCDGA +F +M ++G++PN T
Sbjct: 475 CYSQAGDCDGATNVFIKMSMQGMKPNEFT------------------------------- 503
Query: 271 GAEAIAVVLSVCADLAAD-HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
I+ + CA A G+ H IK ++D + V +AL+ +Y + G + A+ +
Sbjct: 504 ----ISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIV 559
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE----KLDGGS 371
F ++++VSWN++I+ YA+ G EA++ F Q+E ++DG +
Sbjct: 560 FERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGAT 605
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 167/355 (47%), Gaps = 44/355 (12%)
Query: 255 ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY-VFVKNAL 313
E +D F + + G GA A++ VL VC + G+ +H +K GF+ V V AL
Sbjct: 83 EALDHFVDVHRCGRVQGA-AVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTAL 141
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ +Y K G V+ + +F + ++N+V+W +L+T Y + C + + +F ++ + +G
Sbjct: 142 VDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRM-RAEG---V 197
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
PN ++++V+ A AS G A+++GR
Sbjct: 198 WPNPFTFTSVLSAVASQG-----------------------------------AVDLGRR 222
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+H V+ + V N L+NMY KCG +EE VF Q+E +D+++WN++++G +N
Sbjct: 223 VHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEH 282
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHY 552
AL F + + K + V+ C++ + R++ +++ F + +
Sbjct: 283 QLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNV--M 340
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
++D + G L +A +I MP N W ++ C + + +A A+ S++
Sbjct: 341 TAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRM 395
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 191/661 (28%), Positives = 344/661 (52%), Gaps = 84/661 (12%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
++++++QVH+ +I G +++ ++ +L Y + L A +F P + S+ +N+
Sbjct: 213 SVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIP---ERDSVTFNA 269
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
+L G A+ L+ KM+++G FTF ++ A G FGQ VH V
Sbjct: 270 LLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA----GIQLDDIEFGQQVHGFV 325
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
++ F NV + N L+ Y+K ++ + A
Sbjct: 326 VKCNFVWNVFVANALLDFYSKHDRVVE-------------------------------AS 354
Query: 223 ELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
+LF M E++G +++ L++ +A GR++E+++LF ++ G + A +LS+
Sbjct: 355 KLFYEMPEVDG-----ISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSI 409
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
A +G+ IH I V +A+ I+
Sbjct: 410 AAISLNLDIGRQIHSQTI---------VTDAI----------------------SEILVG 438
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
N+L+ YA+ G EA +FS L + W+A+I ++ G E+ L LF
Sbjct: 439 NSLVDMYAKCGEFGEANRIFSDLAIQSS--------VPWTAMISSYVQKGLHEDGLKLFV 490
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+MQ AK+ A++ T + ++ CA A+L +G+++H H++ N+ + L++MY KCG
Sbjct: 491 EMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCG 550
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
+++ +F+++ ++ ++WN++IS Y NG G+ L FEEM+ +G +PD V+ +++L
Sbjct: 551 SIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILC 610
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
ACSH GLV EG + FD M R +++ P+ EHYA +D+L R G EA ++ MP EP+
Sbjct: 611 ACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDE 670
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGL-ITETTGSYMLLSNIYAASGRWEDAAKVRIS 640
+W ++LNSC +HKN ++A+ A+Q+F + + Y+ +SNIYAA+G W++ KV+ +
Sbjct: 671 IMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKA 730
Query: 641 AKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
+ +G+KKV SW+E+K K H+F++ + ++ + + L+EL +M KG PD+
Sbjct: 731 MRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCA 790
Query: 701 L 701
L
Sbjct: 791 L 791
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/528 (23%), Positives = 236/528 (44%), Gaps = 87/528 (16%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y + G L +AR +F++ + +++ W ++ N + A L+++M + G+ D
Sbjct: 142 YIKSGNLSEARTLFDSM---FQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDH 198
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQI--VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
+ + + F S ++ VH+HV+++G+ + + N L+ Y K + +
Sbjct: 199 VSLATL------LSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLA 252
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
F+LF+ + E + VT+ +LL+ +++
Sbjct: 253 FQLFNDIP-----------------------------------ERDSVTFNALLTGYSKE 277
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
G E ++LF M++ G A +L+ L G+ +HGFV+K F VFV
Sbjct: 278 GFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVA 337
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
NAL+ Y KH V EA ++F ++ ++DG
Sbjct: 338 NALLDFYSKHDRVV-------------------------------EASKLFYEMPEVDG- 365
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
IS++ ++ +A NGR +E+L+LF+++Q + + LLS+ A S L+I
Sbjct: 366 -------ISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDI 418
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
GR+IH + ILV N L++MY KCG E + +F + + + W +MIS Y
Sbjct: 419 GRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQ 478
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
GL E+ L F EM A D + +++ AC+ + G+++ ++ I
Sbjct: 479 KGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFS 538
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
A +VD+ + G +++A + + MP+ N+ W L+++ + + D
Sbjct: 539 GSA-LVDMYAKCGSIKDALQMFQEMPVR-NSVSWNALISAYAQNGDGD 584
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 177/376 (47%), Gaps = 46/376 (12%)
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
+IK GF + N L+ + + GD+ A+ LF E+ KNI S N +I Y ++G EA
Sbjct: 92 IIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEA 151
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
+F SM + ++W+ +IG +A N + EA LF +M + + V+++
Sbjct: 152 RTLFD--------SMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLAT 203
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
LLS E ++N R++H HV+++ + ++V N LL+ Y K L +F I ++D
Sbjct: 204 LLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERD 263
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+T+N++++GY G A+ F +M E G++P F A+L+A + G+++
Sbjct: 264 SVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHG 323
Query: 538 MMV----------------------------REFRIEPQME--HYACMVDLLGRAGLLQE 567
+V + F P+++ Y +V G ++E
Sbjct: 324 FVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKE 383
Query: 568 ASDIVKNMP---MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML---L 621
+ ++ K + + + + TLL+ + N D+ + SQ ++T+ ++ L
Sbjct: 384 SLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQT--IVTDAISEILVGNSL 441
Query: 622 SNIYAASGRWEDAAKV 637
++YA G + +A ++
Sbjct: 442 VDMYAKCGEFGEANRI 457
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 192/651 (29%), Positives = 330/651 (50%), Gaps = 83/651 (12%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFDCKSSSLLWNSILR 105
+ +H I G + F+ +L Y + G L AR VF E D ++ +N+++
Sbjct: 154 VPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKD----AVTYNAMMM 209
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
GL+ AL+L+ MR+ G+ FTF ++ M G VH VL+
Sbjct: 210 GCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMA----HLLLGHQVHALVLRS 265
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
NV + N L+ Y+K + D +LFD++ ++ +S+N++ + +A N L LF
Sbjct: 266 TSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLF 325
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
+ M+ G + + + A +LSV L
Sbjct: 326 REMQKLGFDRQVLPY-----------------------------------ATMLSVAGSL 350
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
H+GK IH ++ G + NALI +Y K G + A++ FS EK+ +SW ALI
Sbjct: 351 PDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALI 410
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
T Y + G +EA+++FS + + + RP+ ++S++I A +S
Sbjct: 411 TGYVQNGQHEEALQLFSDMRR----AGLRPDRATFSSIIKASSS---------------- 450
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
A + +GR++H +++R ++ + L++MY KCGCL+E
Sbjct: 451 -------------------LAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDE 491
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
F+++ +++ I+WN++IS Y G +NA+ FE M+ GF PD V F++VL+ACSH
Sbjct: 492 ALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSH 551
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
GL +E + F +M ++ I P EHYAC++D LGR G + ++ MP + + +W
Sbjct: 552 NGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWT 611
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
++L+SCR+H N ++A A ++FG+ Y++LSNIYA +G+WEDAA V+ + +G
Sbjct: 612 SILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRG 671
Query: 646 LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
++K +G SW+E+K+KI+ F+S + + + + L+ L +M+ +G PD
Sbjct: 672 VRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPD 722
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 182/405 (44%), Gaps = 50/405 (12%)
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G + + +FD++ KN S N++ S ++ + D A LF L N TWT ++
Sbjct: 57 GHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAAQHLF----LSSPHRNATTWTIMM 112
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
+HA GR + + LF M G+ + VL++ +H F IK G +
Sbjct: 113 RAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPS-----LHPFAIKFGLD 167
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
+VFV N L+ Y KHG + A+ +F E+ +K+ V++NA++ ++ GL +A
Sbjct: 168 THVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQA------- 220
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
L LF M+ A + A T S +L+V A
Sbjct: 221 --------------------------------LQLFAAMRRAGIPATHFTFSSILTVAAG 248
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
A L +G ++H V+R + N+ V N LL+ Y KC CL++ +F+++ ++D +++N +
Sbjct: 249 MAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVI 308
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I+ Y N L F EM + GF + + +LS V+ G++I +V
Sbjct: 309 IAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGL 368
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ A ++D+ + G+L A N E +A W L+
Sbjct: 369 ASEDLLGNA-LIDMYSKCGMLDAAKSNFSNRS-EKSAISWTALIT 411
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 183/367 (49%), Gaps = 30/367 (8%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
+H KQ+H QL++ G + L ++ +Y++ G L A++ F + S++ W ++
Sbjct: 353 VHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNR---SEKSAISWTAL 409
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
+ V NG +E AL+L+ MR+ G+ D TF +I+A + G+ +H++++
Sbjct: 410 ITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLA----MIGLGRQLHSYLI 465
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
+ G++ +V + L+ MYAK G + ++ + FD++ +N ISWN + S +A + A++
Sbjct: 466 RSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIK 525
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVC 282
+F+ M G P+ VT+ S+L++ + G +E M F +M+ + I E A V+
Sbjct: 526 MFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVI--- 582
Query: 283 ADLAADHMGKV-----IHGFVIKGGFEDYVFVKNALI--C-VYGKHGDVKVAQNLFSEIE 334
D +G+V + +++ F+ + +++ C ++G +VA + +E
Sbjct: 583 -----DTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGME 637
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV---IGAFASNG 391
+ + L YA AG ++A V + D G + + + SW + I +FASN
Sbjct: 638 PTDATPYVILSNIYARAGQWEDAACVKKIMR--DRG-VRKESGYSWVEIKQKIYSFASND 694
Query: 392 RGEEALD 398
+D
Sbjct: 695 LTSPMID 701
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 135/302 (44%), Gaps = 26/302 (8%)
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
++K GF+ + N + G + A+ +F ++ KNI S N ++++Y+ +G A
Sbjct: 34 MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
+F S N +W+ ++ A A+ GR +AL LFR M V+ + VT++
Sbjct: 94 QHLFL--------SSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTT 145
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
+L++ + +H ++ ++ ++ V N LL+ Y K G L VF ++ KD
Sbjct: 146 VLNLPGCTVP-----SLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKD 200
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+T+N+M+ G GL AL F M AG F ++L+ + + G ++
Sbjct: 201 AVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHA 260
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN--------AYVWGTLLN 589
+++R + + + ++D + L + + MP N AY W N
Sbjct: 261 LVLRSTSVLNVFVNNS-LLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAW----N 315
Query: 590 SC 591
C
Sbjct: 316 QC 317
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 201/661 (30%), Positives = 331/661 (50%), Gaps = 89/661 (13%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
L+ +H + +G A F+A+ + +Y R DAR VF+ P ++LWN++L
Sbjct: 142 LRPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVP---SPDTVLWNTLL-- 196
Query: 107 NVSNGLY-ENALKLYVKMRKLG-VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
GL AL+ +V+M G V D T V+ A + + + G+ VH +
Sbjct: 197 ---AGLSGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANT----TMGRCVHAFGEK 249
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
G + H+V LI +YAK G M +C A L
Sbjct: 250 CGLAQHEHVVTGLISLYAKCGDM-----------------------------EC--ARHL 278
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
F RME P+ VT+ +L+S ++ G + +++LF + G+ + + ++ V +
Sbjct: 279 FDRME----GPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSP 334
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
+ + +H V+K G + V AL +Y + D+ A+ F + EK + SWNA+
Sbjct: 335 FGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAM 394
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
I+ YA+ GL + AV +F Q++ L+ RPN
Sbjct: 395 ISGYAQNGLTEMAVALFQQMQALN----VRPN---------------------------- 422
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
+TIS LS CA+ AL++G+ +H + + N+ V L++MY+KCG +
Sbjct: 423 -------PLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIA 475
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
E +F+ ++ K++++WN MISGYG++G G AL +++M++A P F++VL ACS
Sbjct: 476 EARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACS 535
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP-NAYV 583
H GLV EG +F M ++ I P +EH CMVDLLGRAG L+EA +++ P +
Sbjct: 536 HGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGI 595
Query: 584 WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKT 643
WG LL +C +HK+ D+A+ + ++F L E TG Y+LLSN+Y + ++ +AA VR AK+
Sbjct: 596 WGALLGACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKS 655
Query: 644 KGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWE 703
+ L K G + IE+ + H+F +G+ + LE+L +M G PD + L++
Sbjct: 656 RKLVKTPGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYLEKLTAKMIEAGYRPDTEAALYD 715
Query: 704 M 704
+
Sbjct: 716 V 716
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 194/423 (45%), Gaps = 43/423 (10%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H ++ G +A+A ++ + ++Y RF + AR F+ P S WN+++
Sbjct: 344 LHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMES---WNAMISGYAQ 400
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
NGL E A+ L+ +M+ L V + T + AC +G+ S G+ VH + +
Sbjct: 401 NGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGAL----SLGKWVHKIIANEKLEL 456
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
NV+++ LI MY K G ++++ +FD + KN +SWN+M SG+ L+ AL+L+K M
Sbjct: 457 NVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMM 516
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAAD 288
L P T+ S+L + + G ++E +F M GI G E ++ +
Sbjct: 517 DAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLG----- 571
Query: 289 HMGKVIHGFVIKGGFEDYVF---VKNALI--CVYGKHGDV-KVAQNLFSEIEEKNI---V 339
G++ F + F + AL+ C+ K GD+ K+A E+E +N V
Sbjct: 572 RAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEPENTGYYV 631
Query: 340 SWNALITS---YAEAGLCDEAVEVFSQLEKLDGGSM----ERPNVISWSAVIGAFASNGR 392
+ L TS Y+EA + + + +L K G ++ +RP+V F + R
Sbjct: 632 LLSNLYTSKKQYSEAAVVRQEAKS-RKLVKTPGCTLIEIGDRPHV---------FMAGDR 681
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
D + L K+ A I E+A ++ E H+V+V K + + G
Sbjct: 682 AHPQSDAIY-LYLEKLTAK--MIEAGYRPDTEAALYDVEEEEKEHMVKVHSEK-LAIAFG 737
Query: 453 LLN 455
LLN
Sbjct: 738 LLN 740
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 8/137 (5%)
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
D F A +A+S + G+ A SAAL R +H V + V + L +Y
Sbjct: 112 DSFSFAFAATSLASSCSRGGISPPSAASAAL---RPLHALAVASGFAADNFVASALAKLY 168
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG-FKPDGVAF 516
+ VF+ + D + WN++++G G AL F M AG +PD
Sbjct: 169 FTLSRGNDARKVFDAVPSPDTVLWNTLLAGLS----GSEALEAFVRMAGAGSVRPDSTTL 224
Query: 517 VAVLSACSHAGLVNEGR 533
+VL A + GR
Sbjct: 225 ASVLPAAAEVANTTMGR 241
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 198/657 (30%), Positives = 333/657 (50%), Gaps = 85/657 (12%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
QVH ++ G + + ++ ++++Y + G + AR +F+ S + WNS++
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV---KSVVTWNSMISGYA 271
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+NGL AL ++ MR V +F VI+ C + RF + +H V++ GF
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFT----EQLHCSVVKYGFL 327
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+ +I L+ Y+K M D+ +LF ++
Sbjct: 328 FDQNIRTALMVAYSKCTAMLDALRLFKEI------------------------------- 356
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
G N V+WT+++S + EE +DLF M+++G+ +V+L+ ++
Sbjct: 357 ---GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS 413
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+H V+K +E V AL+ Y K G V
Sbjct: 414 E----VHAQVVKTNYERSSTVGTALLDAYVKLGKV------------------------- 444
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+EA +VFS ++ D +++WSA++ +A G E A+ +F ++ +
Sbjct: 445 ------EEAAKVFSGIDDKD--------IVAWSAMLAGYAQTGETEAAIKMFGELTKGGI 490
Query: 409 VANSVTISGLLSVCAES-AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
N T S +L+VCA + A++ G++ HG ++ ++ ++ V + LL MY K G +E
Sbjct: 491 KPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAE 550
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
VF++ +KDL++WNSMISGY +G AL F+EM + K DGV F+ V +AC+HAG
Sbjct: 551 EVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAG 610
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
LV EG + FD+MVR+ +I P EH +CMVDL RAG L++A +++NMP + +W T+
Sbjct: 611 LVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTI 670
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
L +CR+HK T++ A +I + E + +Y+LLSN+YA SG W++ AKVR + +K
Sbjct: 671 LAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVK 730
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
K G SWIEVK K + F +G+ + LE+L+ ++++ G PD +L ++
Sbjct: 731 KEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDI 787
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/577 (23%), Positives = 261/577 (45%), Gaps = 104/577 (18%)
Query: 78 RLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPL 137
RL++A N+F+ +P + S + S+L +G + A +L++ + +LG+ D F
Sbjct: 42 RLYNAHNLFDKSPGRDRESYI---SLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSS 98
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
V++ + F G+ +H ++ GF +V + L+ Y K D K+FD++
Sbjct: 99 VLKVSATLCDELF----GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
+ +N ++W + SG+A N D L LF RM+ EG +PN T+
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTF----------------- 197
Query: 258 DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
A L V A+ G +H V+K G + + V N+LI +Y
Sbjct: 198 ------------------AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 239
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF---------------- 361
K G+V+ A+ LF + E K++V+WN++I+ YA GL EA+ +F
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFA 299
Query: 362 ------SQLEKLDGGSMERPNVISW---------SAVIGAFASNGRGEEALDLFRKMQ-L 405
+ L++L +V+ + +A++ A++ +AL LF+++ +
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 406 AKVVANSVTISGLLSVCAESAALNI---------------------------GREIHGHV 438
VV+ + ISG L + A+++ E+H V
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQV 419
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
V+ + ++ V LL+ Y+K G +EE VF I+ KD++ W++M++GY G E A+
Sbjct: 420 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGL-VNEGRRIFDMMVREFRIEPQMEHYACMVD 557
F E+ + G KP+ F ++L+ C+ + +G++ ++ R++ + + ++
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS-RLDSSLCVSSALLT 538
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+ + G ++ A ++ K E + W ++++ H
Sbjct: 539 MYAKKGNIESAEEVFKRQ-REKDLVSWNSMISGYAQH 574
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 198/435 (45%), Gaps = 80/435 (18%)
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
++ SLL +R GR +E LF + + G+E+ + VL V A L + G+ +H
Sbjct: 60 SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQC 119
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
IK GF D V V +L+ Y K + K + +F E++E+N+V+W LI+ YA + DE +
Sbjct: 120 IKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVL 179
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
+F +++ + G+ +PN +++A +G A G G L
Sbjct: 180 TLFMRMQ--NEGT--QPNSFTFAAALGVLAEEGVGGRGL--------------------- 214
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
++H VV+ ++K I V N L+N+Y+KCG + + ++F++ E K +
Sbjct: 215 --------------QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV 260
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS-----------HAG 527
+TWNSMISGY NGL AL F M + +F +V+ C+ H
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCS 320
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR-----------------AGLLQ---- 566
+V G +FD +R + + A M+D L +G LQ
Sbjct: 321 VVKYG-FLFDQNIRTALMVAYSKCTA-MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGK 378
Query: 567 -EASDIVKNMP---MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLS 622
EA D+ M + PN + + +L + + ++V + + + T G+ +L
Sbjct: 379 EEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYER-SSTVGTALL-- 435
Query: 623 NIYAASGRWEDAAKV 637
+ Y G+ E+AAKV
Sbjct: 436 DAYVKLGKVEEAAKV 450
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 34 FDHLLQQCK----TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA 89
F +L C ++ Q KQ H I + ++S +++ +L++YA+ G + A VF+
Sbjct: 497 FSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+ + WNS++ +G AL ++ +M+K V DG TF V AC G
Sbjct: 557 R---EKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAG 610
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 192/584 (32%), Positives = 295/584 (50%), Gaps = 48/584 (8%)
Query: 114 ENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHI 173
E+A+ Y +M G + D +TFP +++A S + + VH HV++ G N H+
Sbjct: 25 EDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSA----APVRAVHAHVVKFGMGRNAHV 80
Query: 174 VNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL 233
L+ YA G + + L E E
Sbjct: 81 ATSLVTAYAAGGDGAAARALLS---------------------------------ERERD 107
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD-HMGK 292
P V W +L+S H RC R E F M + G VLS C D +G
Sbjct: 108 TP--VVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGM 165
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+HG V+ G + V+NAL+ +Y + D++ A LF ++ +++VSW +L++ G
Sbjct: 166 QVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLG 225
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
DEA ++F G M + +SW+A+I + R EAL++FR+MQ + V A+
Sbjct: 226 RVDEARDLF--------GRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADE 277
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
T+ +++ CA+ AL +G + ++ R + + V N L++MY KCG +E VF+
Sbjct: 278 FTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKD 337
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+ +D TW ++I G +NG GE A+ F MI PD V F+ VL+AC+HAGLV++G
Sbjct: 338 MHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKG 397
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
R F M + I P + HY C++DL GRAG + EA D + MPM PN+ +WGTLL +CR
Sbjct: 398 REFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACR 457
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
+H N+++ E + ++ + E + Y LLSNIYA RWED ++R + KG+KK G
Sbjct: 458 VHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGC 517
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
S IE+ IH F +G+ K + LE + + N G PD
Sbjct: 518 SLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGYFPD 561
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 209/467 (44%), Gaps = 59/467 (12%)
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + ++WN+++ + + A +V M + G T+ V+ AC G
Sbjct: 106 RDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSAC---GKGTGDVL 162
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G VH V+ G ++ + N L+ MYA+ M ++KLFD ++V++ +SW + SG
Sbjct: 163 LGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLT 222
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
D A +LF RM E + V+WT+++ + + R E +++F M+ +
Sbjct: 223 RLGRVDEARDLFGRMP----ERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEF 278
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ V++ CA L A MG+ + ++ + G + FV NALI +Y K G ++ A ++F ++
Sbjct: 279 TMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDM 338
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQL----EKLD-------------GGSMER-- 374
++ +W A+I A G +EA+E+F ++ E D G +++
Sbjct: 339 HHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGR 398
Query: 375 -------------PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
PNV+ + +I F G+ EALD +M + NS LL+
Sbjct: 399 EFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPM---TPNSTIWGTLLAA 455
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE----GHLVFEQIEKKD 477
C IG + ++++ +N V L N+Y KC E+ H + E+ KK+
Sbjct: 456 CRVHGNSEIGELVTERLLQMD-PENSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIKKE 514
Query: 478 ----LITWNSMI----SGYGMNGLGENALATFEEMI----EAGFKPD 512
LI N +I +G + + + E +I G+ PD
Sbjct: 515 PGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGYFPD 561
Score = 42.7 bits (99), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 94/214 (43%), Gaps = 10/214 (4%)
Query: 58 GANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENAL 117
G AF+ ++ +Y++ G + A +VF+ K W +I+ NG E A+
Sbjct: 307 GIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDK---FTWTAIILGLAVNGYGEEAI 363
Query: 118 KLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRFSFGQIVHNHVLQMGFQGNVHIVNE 176
+++ +M + D TF V+ AC G + R F + + NV
Sbjct: 364 EMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETY----NIAPNVVHYGC 419
Query: 177 LIGMYAKMGQMSDSFKLFDKVRV-KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
+I ++ + G+++++ D++ + N W + + ++ + + EL L+
Sbjct: 420 IIDLFGRAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIG-ELVTERLLQMDPE 478
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
N +T L + +A+C R E+ L + ++GI+
Sbjct: 479 NSTVYTLLSNIYAKCNRWEDVRRLRHTIMEKGIK 512
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 220/832 (26%), Positives = 370/832 (44%), Gaps = 154/832 (18%)
Query: 14 PSNPSRPFSII----TYNNSL----LDCFDHLLQQCKTIHQ----LKQVHNQLIVTGANA 61
P NP + S++ +++ +L L C LQ C+ + ++H +V G A
Sbjct: 20 PDNPEKILSLVAAKASHHRALGSADLTC---ALQACRGRGNRWPLVLEIHATSVVRGLGA 76
Query: 62 SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYV 121
+ ++ +YA+ G ++ AR VF+ + W ++L +GL + A +LY
Sbjct: 77 DRLIGNLLIDLYAKNGLVWQARQVFKELS---SRDHVSWVAMLSGYAQSGLGKEAFRLYS 133
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
+M V+ + V+ AC G F+ G+++H V + F + N LI +Y
Sbjct: 134 QMHWTAVIPTPYVLSSVLSACT-KGKL---FAQGRMIHAQVYKQAFCSETFVGNALIALY 189
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
G + ++F + + +++N + SG A + AL++F M+L GL P+ VT
Sbjct: 190 LGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVA 249
Query: 242 SLLSS-----------------------------------HARCGRLEETMDLFDM---- 262
SLL++ + +CG +E D+F++
Sbjct: 250 SLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRT 309
Query: 263 ---------------------------MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
M+ GI +L C +G+ IH
Sbjct: 310 NVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIH 369
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
IK GFE ++V LI +Y K+G + A+ + +E++++VSW ++I Y + C+
Sbjct: 370 SLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCE 429
Query: 356 EAVEVFSQLEKLDGG---------------------------------SMERPNVISWSA 382
EA+ F +++ D G S ++ W+
Sbjct: 430 EALATFKEMQ--DCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNT 487
Query: 383 VIGAFASNGRGEEALDLFR-------------------------------KMQLAKVVAN 411
++ +A GR EEA LFR KM A N
Sbjct: 488 LVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYN 547
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
T +S A A + G+++HG V+ V N L+++Y KCG +E+ ++F
Sbjct: 548 VFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFS 607
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
++ ++ ++WN++I+ +G G AL F++M + G KP+ V F+ VL+ACSH GLV E
Sbjct: 608 EMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEE 667
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
G F M + + P +HYAC+VD+LGRAG L A V MP+ NA +W TLL++C
Sbjct: 668 GLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSAC 727
Query: 592 RMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
++HKN ++ E A + L + SY+LLSN YA +G+W + +VR K +G++K G
Sbjct: 728 KVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPG 787
Query: 652 QSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWE 703
+SWIEVK +H F G+ L + + L EL ++ G +N + E
Sbjct: 788 RSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHE 839
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/633 (29%), Positives = 323/633 (51%), Gaps = 52/633 (8%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY-VKMRKLG 127
+L Y++ G + + + FE P + WN ++ +GL A+K Y MR
Sbjct: 78 LLLAYSKAGLISEMESTFEKLP---DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFS 134
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
T +++ + S S G+ +H V+++GF+ + + + L+ MYA +G +
Sbjct: 135 ANLTRVTLMTMLK----LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
SD+ K+F + +N + +N + G + AL+LF+ G+E + V+W +++
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFR-----GMEKDSVSWAAMIKGL 245
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
A+ G +E ++ F M+ +G+++ VL C L A + GK IH +I+ F+D++
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHI 305
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
+V +ALI +Y K + A+ +F +++K
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQK------------------------------- 334
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
NV+SW+A++ + GR EEA+ +F MQ + + + T+ +S CA ++
Sbjct: 335 --------NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSS 386
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L G + HG + + + V N L+ +Y KCG +++ +F ++ +D ++W +M+S
Sbjct: 387 LEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSA 446
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
Y G + F++M++ G KPDGV V+SACS AGLV +G+R F +M E+ I P
Sbjct: 447 YAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVP 506
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
+ HY+CM+DL R+G L+EA + MP P+A W TLL++CR N ++ + A +
Sbjct: 507 SIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESL 566
Query: 608 FGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG 667
L Y LLS+IYA+ G+W+ A++R + K +KK GQSWI+ K K+H FS+
Sbjct: 567 IELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSAD 626
Query: 668 NSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
+ L + LEEL ++ + G PD +
Sbjct: 627 DESSPYLDQIYAKLEELNNKIIDNGYKPDTSFV 659
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 115/233 (49%), Gaps = 10/233 (4%)
Query: 34 FDHLLQQCK---TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L C I++ KQ+H +I T ++ + ++ +Y + L A+ VF+
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + W +++ G E A+K+++ M++ G+ D +T I AC + S
Sbjct: 333 ---QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLE- 388
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G H + G V + N L+ +Y K G + DS +LF+++ V++ +SW M S
Sbjct: 389 ---EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVS 445
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
+A ++LF +M GL+P+ VT T ++S+ +R G +E+ F +M
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 186/632 (29%), Positives = 319/632 (50%), Gaps = 95/632 (15%)
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKL---------------YVKMRKLGVLGDGF 133
PF K S+L ++++ GL AL + + +M + + F
Sbjct: 35 PPFIPKGPSVLATTLIKSYFGKGLIGEALMIAGYTSCNNHTHAWMVFCEMMNEELDPNAF 94
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG-QMSDSFK 192
T V++ACK M S+G++VH ++ G G +++ N L+ MYA M D+
Sbjct: 95 TISSVLKACKGMKCL----SYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACM 150
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+F + +KN +S WT+L++ +
Sbjct: 151 VFRGIHLKNEVS-----------------------------------WTTLIAGYTHRDD 175
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
+ +F M +E+ + ++ + C + + G+ +H V K GFE + V N+
Sbjct: 176 GYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNS 235
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
++ +Y + A F E+ ++++++WN LI Y
Sbjct: 236 ILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGY------------------------ 271
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
ER N E+L +F M+ N T + +++ CA A LN G+
Sbjct: 272 ERSNPT----------------ESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQ 315
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
+IHG ++R ++ N+ + N L++MY KCG + + H VF + ++DL++W +M+ GYG +G
Sbjct: 316 QIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHG 375
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
GE A+ F++M+ +G +PD V F+A+LSACSHAGLV+EG R F +MV ++ I P E Y
Sbjct: 376 YGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIY 435
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
C+VDLLGRAG ++EA +++++MP +P+ VWG L +C+ H ++ + A +I L
Sbjct: 436 GCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRP 495
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
G+Y++LSNIYAA G+W + A++R K G KK G+SW+EV ++ F G+ + S
Sbjct: 496 HMAGTYVMLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGS 555
Query: 673 DLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
++ + +VLE L M+ G VPD D +++++
Sbjct: 556 KIEGIYQVLENLIGHMKESGYVPDLDCLIYDL 587
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 177/371 (47%), Gaps = 51/371 (13%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFG-RLFDARNVFETAPFD 92
+L+ CK + L + VH I G + ++ ++ +YA + DA VF
Sbjct: 99 VLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLK 158
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ S W +++ L+++ +M V + F+F + +RAC +GS
Sbjct: 159 NEVS---WTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSH---- 211
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
+FG+ +H V + GF+ N+ ++N ++ MY + S++ + F ++ ++ I+WN + +G+
Sbjct: 212 TFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGY 271
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
+ + +L +F ME EG PN T+TS
Sbjct: 272 ERSNPTE-SLYVFSMMESEGFSPNCFTFTS------------------------------ 300
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+++ CA LA + G+ IHG +I+ G + + + NALI +Y K G++ + +F
Sbjct: 301 -----IMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGG 355
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ +++VSW A++ Y G +EAVE+F ++ + S RP+ + + A++ A + G
Sbjct: 356 MSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVR----SGIRPDRVVFMAILSACSHAGL 411
Query: 393 GEEALDLFRKM 403
+E L F+ M
Sbjct: 412 VDEGLRYFKLM 422
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/463 (38%), Positives = 269/463 (58%), Gaps = 12/463 (2%)
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH---MGKVI 294
V+WTS +S H + + F M + +E + +LS CA + G +
Sbjct: 53 VSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAAL 112
Query: 295 HGFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
H K GF + V V ALI +Y K G + A+ +F ++ +N+VSWN +I Y + G
Sbjct: 113 HTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGD 172
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
D+A+++F +L NV+SW+ VIG F EEAL+ FR+MQLA VV + V
Sbjct: 173 VDDALKLFDKLP--------VKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFV 224
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
T+ ++S CA AL +G +H V++ N+ V N L++MY +CGC+E VF+ +
Sbjct: 225 TVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGM 284
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
+++L++WNS+I G+ +NGL + AL+ F M + G +P+GV++ + L+ACSHAGL++EG
Sbjct: 285 SQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGL 344
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRM 593
+IF + R+ R P++EHY C+VDL RAG L+EA D++K MPM PN V G+LL +CR
Sbjct: 345 KIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRT 404
Query: 594 HKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
+ ++AE + L +Y+L SNIYAA G+W+ A+KVR K +GL+K S
Sbjct: 405 QGDVELAEKVMKYQVELYPGGDSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNLAFS 464
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
IE+ IH F SG+ + + LE L+ ++ G VPD
Sbjct: 465 SIEIDSGIHKFVSGDKYHEENDYIYSALELLSFELHLYGYVPD 507
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 185/375 (49%), Gaps = 41/375 (10%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
W S + + N + A +++M + V + T ++ AC S + +FG +H
Sbjct: 55 WTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPS-KTSITFGAALH 113
Query: 160 NHVLQMGFQGN-VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
H + GF N V + LI MYAK G++ + +FD++ V+N +SWN M G+ N D
Sbjct: 114 THAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDV 173
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
D AL+LF ++ ++ N V+WT ++ + EE ++ F M+ G+ + +
Sbjct: 174 DDALKLFDKLPVK----NVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAI 229
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
+S CA+L A +G +H V+K F D V V N+LI +Y + G +++A+ +F + ++N+
Sbjct: 230 ISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNL 289
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEK----------------------LDGG-----S 371
VSWN++I +A GL D+A+ F ++K +D G
Sbjct: 290 VSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFAD 349
Query: 372 MER-----PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
++R P + + ++ ++ GR +EA D+ +KM + + N V + LL+ C
Sbjct: 350 IKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKMPM---MPNEVVLGSLLAACRTQG 406
Query: 427 ALNIGREIHGHVVRV 441
+ + ++ + V +
Sbjct: 407 DVELAEKVMKYQVEL 421
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 199/679 (29%), Positives = 336/679 (49%), Gaps = 90/679 (13%)
Query: 34 FDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + L+ VH G +A F++ ++ +YA+ A VF P
Sbjct: 132 FPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMP 191
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ WN++L +G Y + + + M+ D + A + +
Sbjct: 192 ---ARDVVAWNAMLAGYALHGKYSDTIACLLLMQD-----DHAPNASTLVALLPLLAQHG 243
Query: 151 RFSFGQIVHNHVLQM----GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
S G+ VH + ++ + V + L+ MYAK G + + ++F+ + V+N
Sbjct: 244 ALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNE---- 299
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
VTW++L+ CGR+ E LF M +
Sbjct: 300 -------------------------------VTWSALVGGFVLCGRMLEAFSLFKDMLAQ 328
Query: 267 GIE-VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
G+ + ++A L CA+L+ +GK +H + K G
Sbjct: 329 GLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLH--------------------- 367
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
++ + N+L++ YA+AGL D+A +F Q+ D +S+SA++
Sbjct: 368 ----------TDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKD--------TVSYSALVS 409
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
+ NG+ +EA +FRKMQ V + T+ L+ C+ AAL G+ HG V+ +
Sbjct: 410 GYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIAS 469
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
+ N L++MY KCG ++ +F+ + +D+++WN+MI+GYG++GLG+ A A F +M
Sbjct: 470 ETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMK 529
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
+PD V F+ ++SACSH+GLV EG+R F MM ++ I P+MEHY MVDLL R G L
Sbjct: 530 HQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFL 589
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
EA ++ MP++ + VWG LL +CR+HKN D+ + ++S I L E TG+++LLSNI+
Sbjct: 590 DEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIF 649
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
+A+GR+++AA+VRI K +G KK G SWIE+ +H F G+ + + + L+ +
Sbjct: 650 SAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNIL 709
Query: 686 LQMENKGCVPDNDIILWEM 704
+ + G D +L ++
Sbjct: 710 VDINKLGYRADTSFVLQDV 728
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 97/217 (44%), Gaps = 5/217 (2%)
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
P + ++A+I A++ G + N+ T +L C+ L R +
Sbjct: 92 PGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSALLDLRSARAV 151
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
H H R ++ ++ V L+++Y KC VF ++ +D++ WN+M++GY ++G
Sbjct: 152 HCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKY 211
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY-- 552
+ +A +++ P+ VA+L + G +++GR + VR + +
Sbjct: 212 SDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLV 270
Query: 553 -ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
++D+ + G L AS + + M + N W L+
Sbjct: 271 GTALLDMYAKCGHLVYASRVFEAMAVR-NEVTWSALV 306
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 210/734 (28%), Positives = 358/734 (48%), Gaps = 115/734 (15%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H +I G F+ ++++Y +FG + A VF P + + WNSI+
Sbjct: 53 IHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPV---RNLVSWNSIISGFSE 109
Query: 110 NGLYENALKLYVKMR--KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
NG ++ + V+M + G+L D T V+ C + G +H +++G
Sbjct: 110 NGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVC----AREVDVQMGIRIHGLAVKLGL 165
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+V + N L+ MY+K G ++++ LFDK KN +SWN M G A LF+
Sbjct: 166 SEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFRE 225
Query: 228 MEL-EGLEPNFVTWTSLL-----------------------------------SSHARCG 251
M++ E +E N VT ++L +++A+CG
Sbjct: 226 MQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCG 285
Query: 252 RL-------------------------------EETMDLFDMMRKRGIEVGAEAIAVVLS 280
L + ++L+ M G+ I +L
Sbjct: 286 MLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLL 345
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
A L + GK +HGFV++ G E F+ +L+ +Y G+ A+ LF +EEK+ VS
Sbjct: 346 ASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVS 405
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
WNA+I+ Y++ GL ++A L LF
Sbjct: 406 WNAMISGYSQNGLPEDA---------------------------------------LILF 426
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
RK+ + + + +L C++ +AL +G+E H + ++ + +++ V ++MY K
Sbjct: 427 RKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKS 486
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
GC++E VF+ ++ KDL +WN++I+ YG++G GE ++ FE M + G PDG F+ +L
Sbjct: 487 GCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGIL 546
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
+ CSHAGLV EG + F+ M IEP++EHYAC++D+LGRAG L +A +V MP +P+
Sbjct: 547 TVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPD 606
Query: 581 AYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRIS 640
+ VW +LL+ CR ++ + +A ++ L + +Y+ LSN+YA SGRW+D +VR
Sbjct: 607 SRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQM 666
Query: 641 AKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
K GL+K AG SWIE+ K+H F +G++L K + +L +M G P+ +
Sbjct: 667 IKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAV 726
Query: 701 LWEMMGKKNVKRIQ 714
L ++ +K +++++
Sbjct: 727 LHDVDEEKKIEKLR 740
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 144/560 (25%), Positives = 242/560 (43%), Gaps = 117/560 (20%)
Query: 110 NGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
N LY +A+ ++VK+ D FTFP VI+AC GS G+++H V++MG
Sbjct: 8 NELYSDAIDMFVKLITDTEFNADNFTFPCVIKACT--GSLDR--GLGEVIHGMVIKMGLL 63
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+V + N LI MY K G + + K+F + V+N +SWN + SGF+ N ++ M
Sbjct: 64 LDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEM 123
Query: 229 EL--EGLEPNFVTWT-----------------------------------SLLSSHARCG 251
EGL P+ T SL+ +++CG
Sbjct: 124 MAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCG 183
Query: 252 RLEETMDLFD--------------------------------MMRKRGIEVGAEAIAVVL 279
L E LFD M + IEV + +L
Sbjct: 184 YLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNIL 243
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
C +++ K +HG+ I+ GF+ V N + Y K G + A+ +F +E K +
Sbjct: 244 PACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVN 303
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
SWNALI A+ G +A+ +L
Sbjct: 304 SWNALIGGCAQNGDPRKAL---------------------------------------NL 324
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
+ +M + +V + TI LL A +L G+E+HG V+R + + + LL++Y+
Sbjct: 325 YIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIH 384
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
CG L+F+ +E+K ++WN+MISGY NGL E+AL F +++ GF+P +A V+V
Sbjct: 385 CGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSV 444
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC-MVDLLGRAGLLQEASDIVKNMPME 578
L ACS + G+ ++ +E AC +D+ ++G ++E+ + + +
Sbjct: 445 LGACSQQSALRLGKETHCYALKALLMEDVF--VACSTIDMYAKSGCIKESRSVFDGLKNK 502
Query: 579 PNAYVWGTLLNSCRMHKNTD 598
A W ++ + +H + +
Sbjct: 503 DLA-SWNAIIAAYGVHGDGE 521
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 178/372 (47%), Gaps = 49/372 (13%)
Query: 36 HLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
++L C I QL K++H I G +A ++ YA+ G L A VF +
Sbjct: 241 NILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETK 300
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+S WN+++ NG AL LY++M G++ D FT ++ A + S R
Sbjct: 301 TVNS---WNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLR--- 354
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
+G+ VH VL+ G + + I L+ +Y G+ S + LFD + K+ +SWN M SG+
Sbjct: 355 -YGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGY 413
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
+ N + AL LF+++ +G +P+ +
Sbjct: 414 SQNGLPEDALILFRKLVSDGFQPSDI---------------------------------- 439
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
A+ VL C+ +A +GK H + +K + VFV + I +Y K G +K ++++F
Sbjct: 440 -AVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDG 498
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
++ K++ SWNA+I +Y G +E++E+F ++ K+ G M P+ ++ ++ + G
Sbjct: 499 LKNKDLASWNAIIAAYGVHGDGEESIELFERMRKV--GQM--PDGFTFIGILTVCSHAGL 554
Query: 393 GEEALDLFRKMQ 404
EE L F +MQ
Sbjct: 555 VEEGLKYFNEMQ 566
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 169/388 (43%), Gaps = 54/388 (13%)
Query: 247 HARCGRLEETMDLFDMMRK--RGIEVGAE--AIAVVLSVCADLAADHMGKVIHGFVIKGG 302
H R E D DM K E A+ V+ C +G+VIHG VIK G
Sbjct: 2 HVAVHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMG 61
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
VFV NALI + Y + G D AV+VF
Sbjct: 62 LLLDVFVGNALIAM-------------------------------YGKFGFVDAAVKVFH 90
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK--VVANSVTISGLLS 420
M N++SW+++I F+ NG ++ D+ +M + ++ + T+ +L
Sbjct: 91 Y--------MPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLP 142
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
VCA + +G IHG V++ +++++ V N L++MY KCG L E ++F++ +K+ ++
Sbjct: 143 VCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVS 202
Query: 481 WNSMISGYGMNGLGENALATFEEM-IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
WN+MI G G A F EM ++ + + V + +L AC + + +
Sbjct: 203 WNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYS 262
Query: 540 VRE-FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
+R F+ + + + V + G+L A + +M + W L+ C + +
Sbjct: 263 IRHGFQYDELVAN--GFVAAYAKCGMLICAERVFYSMETK-TVNSWNALIGGCAQNGDPR 319
Query: 599 VAEAMASQIF--GLITE--TTGSYMLLS 622
A + Q+ GL+ + T GS +L S
Sbjct: 320 KALNLYIQMTYSGLVPDWFTIGSLLLAS 347
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 173/370 (46%), Gaps = 19/370 (5%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
K++ K+VH ++ G +F+ +LS+Y G AR +F+ + SS+ WN
Sbjct: 351 KSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGME---EKSSVSWN 407
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
+++ NGL E+AL L+ K+ G V+ AC + R G+ H +
Sbjct: 408 AMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRL----GKETHCY 463
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
L+ +V + I MYAK G + +S +FD ++ K+ SWN + + + ++ D + +
Sbjct: 464 ALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEES 523
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK-RGIEVGAEAIAVVLS 280
+ELF+RM G P+ T+ +L+ + G +EE + F+ M+ GIE E A V+
Sbjct: 524 IELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMD 583
Query: 281 VCADLAA-DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS---EIEEK 336
+ D +++H + V ++L+ G++++ Q + E+E K
Sbjct: 584 MLGRAGRLDDALRLVHEMPEQPDSR----VWSSLLSFCRNFGELEIGQIVAEKLLELEPK 639
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
N+ ++ +L YA +G D+ V ++ + +++ SW + G S G+
Sbjct: 640 NVENYVSLSNLYAGSGRWDDVRRVRQMIKDI---GLQKDAGCSWIELGGKVHSFVAGDNL 696
Query: 397 LDLFRKMQLA 406
L ++M +
Sbjct: 697 LPQSKEMSMT 706
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 206/661 (31%), Positives = 333/661 (50%), Gaps = 97/661 (14%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS AR GR+ DAR +F+ P + +++ WN+++ +G +A L+ M
Sbjct: 48 MLSALARHGRIADARRLFDEIP---RRNTVSWNAMIAACSDHGRVADARDLFDAMPAR-- 102
Query: 129 LGDGFTFPLVIR-------------ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVN 175
DGF++ L++ A M + + ++ + F V ++
Sbjct: 103 --DGFSWTLMVSCYARAGELGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLR 160
Query: 176 E------------LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
E L+G+ + G+M + K FD++ ++ +SWN+M G+ D D A
Sbjct: 161 EMPAPDIISWNSVLVGL-TRNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAG 219
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
LF + PN V+W +LL+ + R GR+ E +LFD + R + A V+LS
Sbjct: 220 LFAGVP----SPNVVSWVTLLNGYCRAGRIGEARELFDRIPDRNVA----AWNVMLS--G 269
Query: 284 DLAADHMGKVIHGF-----------------VIKGG-------------FEDYVFVKNAL 313
L HM + F +++GG F+ + K AL
Sbjct: 270 YLRLSHMEEAYKLFTEMPDKNSISWTTMISALVRGGKLQEAKDLLDKMPFDSFA-AKTAL 328
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS-- 371
+ Y + + A+ +F +E ++ V WN +I+ Y G+ DEA+ +F Q+ D S
Sbjct: 329 MHGYLQSKMIDDARLIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDMVSWN 388
Query: 372 ---------------------MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
M + N +SW++VI F NG EAL F M+ A
Sbjct: 389 TMIAGYAHDGQMRKAVGIFRKMNQRNTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRA 448
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
+ T + LS CA+ AAL++GR+ H + R + N L++ Y KCG + E VF
Sbjct: 449 DWSTYACCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVF 508
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
+++ D+++WN++I GY NG G A++ F EM + +PD V FV VLSACSHAGL++
Sbjct: 509 DEMPAPDIVSWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLID 568
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
EG F+ M +++ + P EHYACMVDLLGR+G L EA +I++ M ++PNA VWG +L +
Sbjct: 569 EGFDFFNSMTKDYALRPVAEHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGA 628
Query: 591 CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVA 650
CR+HKN ++A+ A +++ L T +Y+LLSNI A +G+W++A +R+ K +G+ K
Sbjct: 629 CRVHKNHELAQLAAEKLYELEPHKTSNYVLLSNITAEAGKWDEAQNMRVFIKERGVHKTP 688
Query: 651 G 651
G
Sbjct: 689 G 689
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 127/530 (23%), Positives = 212/530 (40%), Gaps = 127/530 (23%)
Query: 171 VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
V+ N+ + A+ GQ++ + +LFD + +N +S+N M S A + A LF +
Sbjct: 11 VYRSNQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPR 70
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG-----IEVGAEAIAVVLSVCADL 285
N V+W +++++ + GR+ + DLFD M R + V A A L + D
Sbjct: 71 R----NTVSWNAMIAACSDHGRVADARDLFDAMPARDGFSWTLMVSCYARAGELGLARD- 125
Query: 286 AADHM---------GKVIHGFVIKGGFEDYVFV--------------------------- 309
A D M +I G+ G F+D V +
Sbjct: 126 ALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVR 185
Query: 310 ---------------KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
N ++ Y + GDV A LF+ + N+VSW L+ Y AG
Sbjct: 186 AVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYCRAGRI 245
Query: 355 DEAVEVFSQLEK---------LDG--------------GSMERPNVISWSAVIGAFASNG 391
EA E+F ++ L G M N ISW+ +I A G
Sbjct: 246 GEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEMPDKNSISWTTMISALVRGG 305
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI-HGHVVRVSMNKNILVQ 450
+ +EA DL KM A + + G L +S ++ R I G VR + +
Sbjct: 306 KLQEAKDLLDKMPFDSFAAKTALMHGYL----QSKMIDDARLIFDGLEVR-----DAVCW 356
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM------ 504
N +++ Y+ CG L+E ++F+Q+ KD+++WN+MI+GY +G A+ F +M
Sbjct: 357 NTMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQRNTV 416
Query: 505 ----IEAGF---------------------KPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+ +GF + D + LSAC+ ++ GR+ ++
Sbjct: 417 SWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLAALHVGRQFHSLL 476
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
R I A ++ + G + EA + MP P+ W L++
Sbjct: 477 ARSGYIGDSFAGNA-LISAYAKCGRILEARQVFDEMP-APDIVSWNALID 524
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 114/247 (46%), Gaps = 17/247 (6%)
Query: 25 TYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
TY L C D +H +Q H+ L +G +F ++S YA+ GR+ +AR
Sbjct: 452 TYACCLSACAD-----LAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQ 506
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
VF+ P + WN+++ SNG A+ ++ +M V D TF V+ AC
Sbjct: 507 VFDEMP---APDIVSWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSH 563
Query: 145 MGSFRFRFS-FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NY 202
G F F + ++ L+ + +V +L+G + G++S++F++ ++V+ N
Sbjct: 564 AGLIDEGFDFFNSMTKDYALRPVAEHYACMV-DLLG---RSGRLSEAFEIIQGMQVQPNA 619
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFD 261
W M A + L +L LEP+ + LLS+ A G+ +E ++
Sbjct: 620 GVWGAMLG--ACRVHKNHELAQLAAEKLYELEPHKTSNYVLLSNITAEAGKWDEAQNMRV 677
Query: 262 MMRKRGI 268
+++RG+
Sbjct: 678 FIKERGV 684
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 206/687 (29%), Positives = 359/687 (52%), Gaps = 59/687 (8%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
V+ Q++ G + ++ ++ +Y+R G L AR VF+ P + WNS++ S
Sbjct: 128 VYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPV---RDLVSWNSLISGYSS 184
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
+G YE AL++Y ++R ++ D FT V+ A + GQ +H L+ G
Sbjct: 185 HGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANL----LVVKQGQGLHGFTLKSGVNS 240
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
+ N L+ MY K + +D+ ++FD++ V++ +++N M G+ + ++++F
Sbjct: 241 VSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE-N 299
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEE---TMDLFDMMRKRGIEVGAEAIAVVLSV---CA 283
L+ +P+ +T TS+L + CG L + +++ M + G + + +++ V C
Sbjct: 300 LDQFKPDILTVTSVLCA---CGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCG 356
Query: 284 DL--AAD-----------HMGKVIHGFVIKGGFED--------YVFVKNA-------LIC 315
D+ A D +I G++ G + + + A LI
Sbjct: 357 DMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLIS 416
Query: 316 VYGKHGDVKVAQNLFSEIEEKNI-----VSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
+ + D+K + L S + I VS NALI YA+ G +++++F+ + LD
Sbjct: 417 LSTRLADLKFGKGLHSNGIKSGIYIDLSVS-NALIDMYAKCGEVGDSLKIFNSMGTLD-- 473
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
++W+ VI A G L + +M+ KVV + T L +CA AA +
Sbjct: 474 ------TVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRL 527
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
G+EIH ++R + + N L+ MY KCGCLE VFE++ ++D++TW MI YGM
Sbjct: 528 GKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGM 587
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
G GE AL +F +M ++G PD V F+A++ ACSH+GLV +G F+ M ++I+P +E
Sbjct: 588 YGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIE 647
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL 610
HYAC+VDLL R+ + +A + ++ MP+EP+A +W ++L +CR + + AE ++ +I L
Sbjct: 648 HYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIEL 707
Query: 611 ITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSL 670
+ G +L SN YAA +W+ + +R S + K +KK G SWIE+ +K+H+F SG+
Sbjct: 708 NPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDS 767
Query: 671 QSDLKNVCEVLEELALQMENKGCVPDN 697
+ + + LE L M +G +PD+
Sbjct: 768 APQSEAIHKSLEILYSLMAKEGYIPDS 794
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/555 (23%), Positives = 262/555 (47%), Gaps = 85/555 (15%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE-TAPFDCKSS 96
L +++L+++H +I G + S F + +++ Y+ F + +VF +P +
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSP---AKN 70
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
+WNSI+R NG + AL+ Y K+R+ V D +TFP VI+AC + F G
Sbjct: 71 VYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGL----FDAEMGD 126
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+V+ +L+MGF+ ++++ N L+ MY++MG +S + ++FD++ V++ +SWN + SG++ +
Sbjct: 127 LVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
+ ALE++ + + P+ T +S
Sbjct: 187 YYEEALEIYHELRNSWIVPDSFTVSS---------------------------------- 212
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
VL A+L G+ +HGF +K G V N L+ +Y K A+ +F E+ +
Sbjct: 213 -VLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVR 271
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
+ V++N +I Y + + +E+V++F LE LD +P+++
Sbjct: 272 DSVTYNTMICGYLKLEMVEESVKMF--LENLD---QFKPDIL------------------ 308
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
T++ +L C L++ + I+ +++R V+N L+++
Sbjct: 309 -----------------TVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDV 351
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCG + VF +E KD ++WNS+ISGY +G A+ F+ M+ + D + +
Sbjct: 352 YAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITY 411
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
+ ++S + + G+ + ++ I + ++D+ + G + ++ I +M
Sbjct: 412 LMLISLSTRLADLKFGKGLHSNGIKS-GIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMG 470
Query: 577 MEPNAYVWGTLLNSC 591
+ W T++++C
Sbjct: 471 T-LDTVTWNTVISAC 484
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 329 bits (844), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 219/674 (32%), Positives = 334/674 (49%), Gaps = 114/674 (16%)
Query: 61 ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY 120
A F +++ YA GR DAR VF+ P + WNS++ ++NG+ E+A +
Sbjct: 152 ADVFAGNTLVTFYAVCGRAADARRVFDEMP---ARDVVSWNSLVSALLTNGMLEDAKRAV 208
Query: 121 VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
V M + GV + + ++ AC G+ R FG VH VL+ G V++ N L+ M
Sbjct: 209 VGMMRSGVPVNVASLVSILPAC---GTERDE-GFGLCVHGLVLKFGLNSVVNLGNALVDM 264
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
Y K G + S +F+ ++ KN +SWN FA + LE+F+ M + P VT
Sbjct: 265 YGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTL 324
Query: 241 TSLLSS-------------HARCGRLEETMDLF------DMMRKRG-----------IEV 270
+SLL + H R D+F DM K G IEV
Sbjct: 325 SSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEV 384
Query: 271 ----------------GAEAIAV--------------------VLSVCADLAADHMGKVI 294
GAEA A +L C+ +A+ MGK I
Sbjct: 385 RNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQI 444
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
H + I+ +FV NALI VY K G + +A+ +F EK+ VS+N LI Y+++ C
Sbjct: 445 HAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDR-SEKDGVSYNTLIVGYSQSQCC 503
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
E+L LF++M+LA + ++V+
Sbjct: 504 ---------------------------------------FESLHLFQQMRLAGIEHDAVS 524
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
G LS C+ +A G+EIHG +V+ ++ + + N LL++Y K G L+ +F +I
Sbjct: 525 FMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRIT 584
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
+KD+ +WN+MI GYGM+G + A F+ M + G + D V+++AVLS CSH GLV+ G++
Sbjct: 585 QKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKK 644
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F M+ + I+PQ HYACMVDLLGRAG L E+++I++NMP N+ VWG LL SCR+H
Sbjct: 645 YFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSDVWGALLGSCRIH 703
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
+ ++A A +F L E +G Y LL N+Y+ SG W +A V+ K++ ++K SW
Sbjct: 704 GDIELARLAAEHLFELKPENSGYYTLLRNMYSESGMWNEANGVKKLMKSRKVQKNPAYSW 763
Query: 655 IEVKRKIHMFSSGN 668
++ K+ F G+
Sbjct: 764 VQSGNKLQAFLVGD 777
Score = 199 bits (505), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 164/631 (25%), Positives = 288/631 (45%), Gaps = 105/631 (16%)
Query: 35 DHLLQ-QCKTIHQLKQVHNQLIVTGANASAF-LAARVLSIYARFGRLFDARNVFETAPFD 92
+H+L+ C L++ H +V+GA ++F LA +L YA + A + PF
Sbjct: 17 EHVLRLHCGGSLLLRRAHAASLVSGALTASFPLAGALLLSYAALPDIPSAHLILRHHPFR 76
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+S+ LWNS+ R S L AL++Y +M + GV D TFP + A +
Sbjct: 77 LRSA-FLWNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHP- 134
Query: 153 SFGQIVHNHVLQMG-FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
+ G +H L+ G +V N L+ YA G+ +D+ ++FD++ ++ +SWN + S
Sbjct: 135 AKGAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSA 194
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
N G LE KR + MMR G+ V
Sbjct: 195 LLTN----GMLEDAKRA------------------------------VVGMMRS-GVPVN 219
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
++ +L C + G +HG V+K G V + NAL+ +YGK GD++ + ++F+
Sbjct: 220 VASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFN 279
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL--------------------------- 364
++EKN VSWN+ I +A AG ++ +E+F +
Sbjct: 280 GMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHL 339
Query: 365 -EKLDGGSMERP---NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA---------- 410
++L G S+ R ++ + ++ +A G E+A +F +++ VV+
Sbjct: 340 GKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQ 399
Query: 411 ---------------------NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
NS T+ LL C+ A++ +G++IH +R S+ ++ V
Sbjct: 400 NGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFV 459
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
N L+++Y KCG L +F++ E KD +++N++I GY + +L F++M AG
Sbjct: 460 SNALIDVYAKCGQLNLARYIFDRSE-KDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGI 518
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
+ D V+F+ LSACS+ +G+ I ++V+ ++ ++D+ + G+L AS
Sbjct: 519 EHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRL-LDSHPFLANSLLDVYTKGGMLDTAS 577
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
I N + + W T++ MH DVA
Sbjct: 578 KIF-NRITQKDVASWNTMILGYGMHGQIDVA 607
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 154/344 (44%), Gaps = 45/344 (13%)
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
++ + N L+T YA G +A VF ++ D V+SW++++ A +NG E+A
Sbjct: 153 DVFAGNTLVTFYAVCGRAADARRVFDEMPARD--------VVSWNSLVSALLTNGMLEDA 204
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
M + V N ++ +L C G +HG V++ +N + + N L++M
Sbjct: 205 KRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDM 264
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y K G LE VF +++K+ ++WNS I + G E+ L F M E P V
Sbjct: 265 YGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTL 324
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
++L A G + G+ + +R +E + ++D+ + G ++AS I +N+
Sbjct: 325 SSLLPALVDLGYFHLGKELHGYSIRR-AVESDIFIANTLMDMYAKFGCSEKASAIFENIE 383
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE------TTGSYMLLSNIYAASGR 630
+ N W ++ + +N AEA F L+ E S+ L++ + A S
Sbjct: 384 VR-NVVSWNAMI--ANLTQNGAEAEA-----FRLVIEMQKNGECPNSFTLVNLLPACS-- 433
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
R+++ +++ ++IH +S SL SDL
Sbjct: 434 -------RVAS-------------VKMGKQIHAWSIRRSLMSDL 457
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 329 bits (844), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 211/676 (31%), Positives = 336/676 (49%), Gaps = 85/676 (12%)
Query: 30 LLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
+L F LL+ C L + VH QL G + + + + ++Y + R DAR VF
Sbjct: 15 VLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVF 74
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR--KLGVLGDGFTFPLVIRACKF 144
+ P + WN+++ NGL +A++ V+M+ + G D T V+ AC
Sbjct: 75 DRMP---SRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACAD 131
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
+ + VH L+ G V++ ++ Y K G + + +FD + V+N +S
Sbjct: 132 ARALHA----CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVS 187
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
W +++ +A G E M LF M
Sbjct: 188 -----------------------------------WNAMIDGYADNGNATEAMALFWRMV 212
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
+ G++V ++ L C +L + +H +++ G V V NALI
Sbjct: 213 QEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALI---------- 262
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
T+YA+ D A +VF++L G R ISW+A+I
Sbjct: 263 ---------------------TTYAKCKRADLAAQVFNEL----GNKKTR---ISWNAMI 294
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
F N E+A LF +MQL V +S T+ ++ A+ + R IHG+ +R ++
Sbjct: 295 LGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLD 354
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
+++ V L++MY KCG + +F+ + +ITWN+MI GYG +G G+ A+ FEEM
Sbjct: 355 QDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEM 414
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
G P+ F++VL+ACSHAGLV+EG++ F M +++ +EP MEHY MVDLLGRAG
Sbjct: 415 KGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGK 474
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNI 624
L EA +KNMP+EP V+G +L +C++HKN ++AE A IF L E ++LL+NI
Sbjct: 475 LDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANI 534
Query: 625 YAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
YA + W+D A+VR + + KGL+K G S I++K ++H F SG++ K++ L +L
Sbjct: 535 YANASMWKDVARVRTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKL 594
Query: 685 ALQMENKGCVPDNDII 700
++++ G VPD D I
Sbjct: 595 IEEIKDMGYVPDTDSI 610
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 329 bits (844), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 200/668 (29%), Positives = 353/668 (52%), Gaps = 61/668 (9%)
Query: 33 CFDHLLQQCKTIHQLKQVHNQLIVTG--ANASAFLAARVLSIYARFGRLFDARNVFETAP 90
C D LLQ C+++ L Q+H ++ G N + G + A V
Sbjct: 19 CVD-LLQSCESMAHLTQIHAKIFRVGLQDNMDTLTKIVLFCTDPSRGSIRYAERVLGFVQ 77
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
C +++N +++ + + L L+ ++RK G+ D FT P V +A +G
Sbjct: 78 SPC---LVMYNLMIKAVAKDENFRKVLVLFSELRKQGLNPDNFTLPPVFKAMGCLG---- 130
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+ G+ VH +V++ GF V N ++GMY +G+M + K+FD++ ++ +SWN++ S
Sbjct: 131 KVVEGEKVHGYVVKSGFDACV--CNSVMGMYGALGKMEVAKKVFDEIPERDVVSWNVLIS 188
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
+ + + A+ +F+RM R+ ++
Sbjct: 189 SYVGHRKFEDAIAVFRRMR----------------------------------RESNLKA 214
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+ LS C+ L +G+ IH +V E + NAL+ +Y K G V A+ +F
Sbjct: 215 DEATVVSTLSACSVLRNQEVGEEIHRYV-DAELEMTTKIGNALLDMYCKCGCVDKARAIF 273
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
E+ KN++ W ++++ YA G DEA E+F + D ++ W+A+I +
Sbjct: 274 DEMGNKNVICWTSMVSGYASNGSLDEARELFERSPVRD--------IVLWTAMINGYVQF 325
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
+EAL LFRKMQ+ ++ ++ + LL CA++ AL G+ +HG++ S+ + +V
Sbjct: 326 NLFDEALKLFRKMQIQRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVG 385
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
L+++Y KCGC+E+ VF +++++D +W S+I G +NG+ AL F +M EAGF+
Sbjct: 386 TALVDVYAKCGCVEKALEVFYEMKERDTASWTSVIYGLAVNGMTSKALDFFSQMEEAGFR 445
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
PD + F+ VL+AC+H GLV EGRR FD M + ++I+P+ EHY+C++DLL RAGLL EA
Sbjct: 446 PDDITFIGVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAGLLDEAEL 505
Query: 571 IVKNMPMEPNAYV---WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
+++ +P+E + V + +LL++CR + N ++E + ++ + + + + LL+++YA+
Sbjct: 506 LLEMIPIESSDIVVPLYCSLLSACRNYGNLKMSERVGRRLERVEVKDSSVHTLLASVYAS 565
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA-- 685
+ RWED VR K G++K G S IEV +H F G ++ ++ VL ++
Sbjct: 566 ANRWEDVTTVRRKMKELGIRKFPGCSSIEVNGVLHEFMVGGPSHMEMDDIHSVLGQVTKW 625
Query: 686 -LQMENKG 692
L +E +G
Sbjct: 626 MLGLEREG 633
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 117/238 (49%), Gaps = 15/238 (6%)
Query: 28 NSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
N+LLD + +C + + + + +++ N + ++S YA G L +AR +FE
Sbjct: 254 NALLDMY----CKCGCVDKARAIFDEM----GNKNVICWTSMVSGYASNGSLDEARELFE 305
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
+P +LW +++ V L++ ALKL+ KM+ + D F +++ C G+
Sbjct: 306 RSPV---RDIVLWTAMINGYVQFNLFDEALKLFRKMQIQRLRPDNFILVTLLKGCAQTGA 362
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
G+ +H ++ + + + L+ +YAK G + + ++F +++ ++ SW
Sbjct: 363 L----EQGKWLHGYIHENSITLDRVVGTALVDVYAKCGCVEKALEVFYEMKERDTASWTS 418
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
+ G A+N AL+ F +ME G P+ +T+ +L++ G +EE FD M K
Sbjct: 419 VIYGLAVNGMTSKALDFFSQMEEAGFRPDDITFIGVLTACNHGGLVEEGRRYFDSMTK 476
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 329 bits (844), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 182/525 (34%), Positives = 292/525 (55%), Gaps = 51/525 (9%)
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN 236
L GM K G++ ++ +LF K+ + +S+N M S + N + + A F+ M ++ +
Sbjct: 13 LAGMSKKRGKLKEAQELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIK----D 68
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
+W ++++ A+ ++++ DLF +M +
Sbjct: 69 TPSWNTMITGFAQNQQMDKARDLFLIMPTKN----------------------------- 99
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
V NA+I Y + GD+ A LF + K++V+W A+IT Y + G
Sbjct: 100 ----------VVTWNAMISGYVECGDLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIGL 149
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
A +F + M N+++W+A+I + N R E+ + LFR M + NS T+S
Sbjct: 150 AERLFEK--------MPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLS 201
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
L C+E +AL +GR++H V + + + L++MY KCG LE+G +F Q+ ++
Sbjct: 202 SALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRR 261
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D++TWN+MISGY +G G+ AL F+EMIE G KPD + FVAVL AC+HAG + G + F
Sbjct: 262 DVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYF 321
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
M +++ + + +HY CMVDLLGRAG L EA D+++ MP +P+A V+GTLL +CR+HKN
Sbjct: 322 HSMAKDYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKN 381
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
T++AE + ++ L + Y+ L+N+YAA+ RW+ A+VR S K+ + K G SWIE
Sbjct: 382 TEMAEFASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYSWIE 441
Query: 657 VKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
VK H F SG+ +L ++ L+EL +M+ G VPD + L
Sbjct: 442 VKSMAHQFRSGDKFHPELASIHGKLKELEKKMKLAGYVPDLEFAL 486
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 121/234 (51%), Gaps = 8/234 (3%)
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
NV N +I Y + G + + KLF+K K+ ++W M +G+ A LF++M
Sbjct: 99 NVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMP 158
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
E N VTW ++++ + R E+ + LF M GI+ + ++ L C++L+A
Sbjct: 159 ----EKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQ 214
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+G+ +H V K D +LI +Y K G ++ LF ++ +++V+WNA+I+ YA
Sbjct: 215 LGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMISGYA 274
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+ G +A+ +F ++ ++ G +P+ I++ AV+ A G + + F M
Sbjct: 275 QHGEGKKALGLFDEM--IEKGM--KPDWITFVAVLMACNHAGFTDLGVKYFHSM 324
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 7/197 (3%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+++ Y + GR+ A +FE P + + + WN+++ + N E+ +KL+ M G+
Sbjct: 137 MITGYMKLGRIGLAERLFEKMP---EKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGI 193
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ T + C + + + G+ VH V + + LI MY K G +
Sbjct: 194 QPNSSTLSSALLGCSELSALQL----GRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLE 249
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
D +KLF +V ++ ++WN M SG+A + + AL LF M +G++P+++T+ ++L +
Sbjct: 250 DGWKLFVQVPRRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACN 309
Query: 249 RCGRLEETMDLFDMMRK 265
G + + F M K
Sbjct: 310 HAGFTDLGVKYFHSMAK 326
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/291 (18%), Positives = 122/291 (41%), Gaps = 50/291 (17%)
Query: 336 KNIVSWNALITSYAEA-GLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
K V+WN+++ ++ G EA E+F ++ + P+ +S++ ++ + N E
Sbjct: 4 KTTVTWNSVLAGMSKKRGKLKEAQELFVKIPE--------PDAVSYNTMLSCYVRNSNME 55
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
A F M + + + I+G A++ ++ R++ + KN++ N ++
Sbjct: 56 RAQAFFEDMPIKDTPSWNTMITGF----AQNQQMDKARDL----FLIMPTKNVVTWNAMI 107
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY---GMNGL------------------ 493
+ Y++CG L+ +FE+ K ++ W +MI+GY G GL
Sbjct: 108 SGYVECGDLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNA 167
Query: 494 ----------GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
E+ + F M+ G +P+ + L CS + GR++ ++ +
Sbjct: 168 MIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLGRQVHQLVCKSP 227
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+ + ++ + + G+L++ + +P + W +++ H
Sbjct: 228 LCDDTTAGTS-LISMYCKCGVLEDGWKLFVQVPRR-DVVTWNAMISGYAQH 276
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 171/551 (31%), Positives = 299/551 (54%), Gaps = 59/551 (10%)
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
+ +++N+ I + +M + + ++ + N +N M GF ++ ALEL+ +M
Sbjct: 13 DCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQML 72
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
+ P T+ SL+ + CG L +R
Sbjct: 73 RANVSPTSYTFPSLIKA---CG-------LVSQLR------------------------- 97
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+ +HG V + GF+ +VFV+ +L+ Y G ++ + +F E+ E+++ +W +++
Sbjct: 98 FAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLV 157
Query: 350 EAGLCDEAVEVFSQLEK---------LDG--------------GSMERPNVISWSAVIGA 386
G A +F + +DG M ++ISW+ +I
Sbjct: 158 RVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINC 217
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
++ N R EAL +F +M + + VT++ ++S CA AL++G+EIH ++++ N +
Sbjct: 218 YSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLD 277
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+ + + L++MY KCG L+ L+F ++ +K+L WNS+I G ++G E ALA F++M
Sbjct: 278 VYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMER 337
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
KP+GV FV+VLSAC+HAGL+ EGR+ F M R+ I P +EHY CMVDLL +AGLL+
Sbjct: 338 EKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLE 397
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
EA +++ M +EPNA +WG LL+ C++H+N ++A+ A+++ L +G Y LL N+ A
Sbjct: 398 EALQLIRTMKLEPNAVIWGALLSGCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVNMNA 457
Query: 627 ASGRWEDAAKVRISAKTKGL-KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
RW +AAK+R++ K +G+ K+ G SWIE++ ++H F++ + + + +L EL
Sbjct: 458 EVNRWGEAAKIRLTMKEQGVEKRCPGSSWIEMESQVHQFAASDKSHAASDEIYSLLAELD 517
Query: 686 LQMENKGCVPD 696
QM+ G VP+
Sbjct: 518 GQMKLAGYVPE 528
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 207/458 (45%), Gaps = 77/458 (16%)
Query: 54 LIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLY 113
++ T N +L + +S + F R+ A + + ++N++++ V +
Sbjct: 5 MVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEI---PNVFVYNAMIKGFVQSYQP 61
Query: 114 ENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHI 173
AL+LYV+M + V +TFP +I+AC + RF + VH HV + GF +V +
Sbjct: 62 VQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRF----AEAVHGHVWRNGFDSHVFV 117
Query: 174 VNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL 233
L+ Y+ MG++ +S ++FD++ ++ +W M SG D A LF M L
Sbjct: 118 QTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNL 177
Query: 234 EP---------------------------NFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
+ ++WT++++ +++ R E + +F+ M K
Sbjct: 178 ATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKH 237
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
GI +A V+S CA L A +GK IH ++++ GF V++ +ALI +Y K G + +
Sbjct: 238 GISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRS 297
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE----KLDG------------- 369
+F ++ EKN+ WN++I A G +EA+ +F ++E K +G
Sbjct: 298 LLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHA 357
Query: 370 ----------GSMER-----PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
SM R P V + ++ + G EEAL L R M+L N+V
Sbjct: 358 GLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEP---NAVI 414
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
LLS C L I +V+ NK ++++ G
Sbjct: 415 WGALLSGCKLHRNLEIA--------QVAANKLMVLEPG 444
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 153/333 (45%), Gaps = 19/333 (5%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
YAR + A +F P + W +++ N + AL ++ +M K G+ D
Sbjct: 187 YARLREVDVAELLFNQMP---ARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDE 243
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
T VI AC +G+ G+ +H +++Q GF +V+I + LI MYAK G + S
Sbjct: 244 VTMATVISACAHLGAL----DLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLL 299
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+F K+R KN WN + G A++ + AL +F +ME E ++PN VT+ S+LS+ G
Sbjct: 300 MFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGL 359
Query: 253 LEETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
+EE F M R I G E ++ + + A + + + + E +
Sbjct: 360 IEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSK--AGLLEEALQ-LIRTMKLEPNAVIWG 416
Query: 312 ALICVYGKHGDVKVAQ---NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
AL+ H ++++AQ N +E N + L+ AE EA ++ +L +
Sbjct: 417 ALLSGCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKI--RLTMKE 474
Query: 369 GGSMERPNVISW---SAVIGAFASNGRGEEALD 398
G +R SW + + FA++ + A D
Sbjct: 475 QGVEKRCPGSSWIEMESQVHQFAASDKSHAASD 507
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 109/226 (48%), Gaps = 14/226 (6%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL-WNSILRV 106
K++H ++ G N ++ + ++ +YA+ G L + +F F + +L WNS++
Sbjct: 263 KEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMF----FKLREKNLFCWNSVIEG 318
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRFSFGQIVHNHVLQM 165
+G E AL ++ KM + + +G TF V+ AC G R F + +H +
Sbjct: 319 LAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPP 378
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALEL 224
G V ++ + +K G + ++ +L ++++ N + W + SG L+ + + A
Sbjct: 379 G----VEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNLEIAQVA 434
Query: 225 FKRMELEGLEP-NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
++ + LEP N +T L++ +A R E + M+++G+E
Sbjct: 435 ANKLMV--LEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVE 478
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 96/241 (39%), Gaps = 48/241 (19%)
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
++ +V+ + N++ + N ++ ++ L + Q+E ++ +N+MI G+ +
Sbjct: 1 MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSAC------------------------------ 523
AL + +M+ A P F +++ AC
Sbjct: 61 PVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTS 120
Query: 524 -----SHAGLVNEGRRIFDMMVREFRIEPQMEHYA--CMVDLLGRAGLLQEASDIVKNMP 576
S G + E R+FD M P+ + +A MV L R G + A + MP
Sbjct: 121 LVDFYSSMGRIEESVRVFDEM-------PERDVFAWTTMVSGLVRVGDMSSAGRLFDMMP 173
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAK 636
+ N W TL++ + DVAE + +Q + S+ + N Y+ + R+ +A
Sbjct: 174 -DRNLATWNTLIDGYARLREVDVAELLFNQ---MPARDIISWTTMINCYSQNKRFREALG 229
Query: 637 V 637
V
Sbjct: 230 V 230
>gi|357131283|ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Brachypodium distachyon]
Length = 654
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 189/551 (34%), Positives = 294/551 (53%), Gaps = 83/551 (15%)
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F+ + + LI YA +G + + ++FD+ VKN WN + AL D AL
Sbjct: 104 FRSDPFLSTRLIEAYAALGALPAARQVFDETPVKNIFVWNALLKALALADHGDEALARLA 163
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
M GRL G+ V + + L C ++
Sbjct: 164 DM----------------------GRL-------------GVPVDSYSYTHGLKACIAVS 188
Query: 287 ADHMG-----KVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
A H + +H I+ G+ + V LI Y K G V+ A+++F+
Sbjct: 189 ASHAPASARVREVHAHAIRRGYALHTHVATTLIDCYAKLGIVRYAESVFA---------- 238
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
+M NV+SWSA+IG +A N R +A++LF+
Sbjct: 239 -----------------------------AMPERNVVSWSAMIGCYAKNERPADAIELFK 269
Query: 402 KMQL--AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
M A +V NS+TI +L+ CA AL+ G+ +H +++R + + V N L+ MYM+
Sbjct: 270 DMMASDADLVPNSITIVSVLNACAGVNALSHGKLLHAYILRRGFDSLVSVLNALMAMYMR 329
Query: 460 CGCLEEGHLVFEQI-EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
CGCLE G +F+ I ++D+++WNS+ISGYGM+G G A+ FEEMI GF P + F++
Sbjct: 330 CGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFIS 389
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
VL ACSHAGLVNEG+ +F+ MV E+ + P+ EHYACMVDLLGRAG L EA +++++M +E
Sbjct: 390 VLGACSHAGLVNEGKMLFESMV-EYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIE 448
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
P+ VWG LL +CR+H + + AE S +F L G+Y+LL++IYA + ++
Sbjct: 449 PSPQVWGALLGACRIHGHVEYAEIACSHLFDLEPRNAGNYVLLADIYARAKLHNQVGVLK 508
Query: 639 ISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
+ L+KV G SWIEVK+K+H F+S ++ ++ + ++ E QM+N+G VPD
Sbjct: 509 ELLEEHALEKVTGCSWIEVKKKLHSFTSVDNKNPPVEQLQALIGEFVAQMKNQGYVPDTG 568
Query: 699 IILWEMMGKKN 709
I+L+++ G++
Sbjct: 569 IVLYDIEGEEK 579
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 193/417 (46%), Gaps = 54/417 (12%)
Query: 61 ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY 120
+ FL+ R++ YA G L AR VF+ P + +WN++L+ + AL
Sbjct: 106 SDPFLSTRLIEAYAALGALPAARQVFDETPV---KNIFVWNALLKALALADHGDEALARL 162
Query: 121 VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG-QIVHNHVLQMGFQGNVHIVNELIG 179
M +LGV D +++ ++AC + + S + VH H ++ G+ + H+ LI
Sbjct: 163 ADMGRLGVPVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLID 222
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELE--GLEPNF 237
YAK+G + + +F + +N +SW+ M +A N A+ELFK M L PN
Sbjct: 223 CYAKLGIVRYAESVFAAMPERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNS 282
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
+T I VL+ CA + A GK++H +
Sbjct: 283 IT-----------------------------------IVSVLNACAGVNALSHGKLLHAY 307
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI-EEKNIVSWNALITSYAEAGLCDE 356
+++ GF+ V V NAL+ +Y + G ++V +++F I +++VSWN+LI+ Y G E
Sbjct: 308 ILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPE 367
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
AV+VF ++ + G S P++I++ +V+GA + G E LF M V + +
Sbjct: 368 AVQVFEEMIHV-GFS---PSIITFISVLGACSHAGLVNEGKMLFESMVEYGVTPRAEHYA 423
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
++ + + L+ E+ + + + + V LL C GH+ + +I
Sbjct: 424 CMVDLLGRAGQLDEAMEL---IRSMHIEPSPQVWGALLG-----ACRIHGHVEYAEI 472
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 172/369 (46%), Gaps = 23/369 (6%)
Query: 20 PFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRL 79
P +Y + L C ++++VH I G +A ++ YA+ G +
Sbjct: 171 PVDSYSYTHGLKACIAVSASHAPASARVREVHAHAIRRGYALHTHVATTLIDCYAKLGIV 230
Query: 80 FDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM--RKLGVLGDGFTFPL 137
A +VF P + + + W++++ N +A++L+ M ++ + T
Sbjct: 231 RYAESVFAAMP---ERNVVSWSAMIGCYAKNERPADAIELFKDMMASDADLVPNSITIVS 287
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
V+ AC + + S G+++H ++L+ GF V ++N L+ MY + G + +F +
Sbjct: 288 VLNACAGVNA----LSHGKLLHAYILRRGFDSLVSVLNALMAMYMRCGCLEVGRHIFKWI 343
Query: 198 -RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
++ +SWN + SG+ ++ A+++F+ M G P+ +T+ S+L + + G + E
Sbjct: 344 GHRRDVVSWNSLISGYGMHGFGPEAVQVFEEMIHVGFSPSIITFISVLGACSHAGLVNEG 403
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAA-DHMGKVIHGFVIKGGFEDYVFVKNALIC 315
LF+ M + G+ AE A ++ + D ++I I+ + V AL+
Sbjct: 404 KMLFESMVEYGVTPRAEHYACMVDLLGRAGQLDEAMELIRSMHIEPSPQ----VWGALLG 459
Query: 316 VYGKHGDVKVAQ----NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
HG V+ A+ +LF ++E +N ++ L YA A L ++ V V +L L+ +
Sbjct: 460 ACRIHGHVEYAEIACSHLF-DLEPRNAGNYVLLADIYARAKLHNQ-VGVLKEL--LEEHA 515
Query: 372 MERPNVISW 380
+E+ SW
Sbjct: 516 LEKVTGCSW 524
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 329 bits (843), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 292/548 (53%), Gaps = 45/548 (8%)
Query: 159 HNHVLQMGFQGNVHIVNELIGMYA--KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
H+ ++++G + + +I A K G ++ + ++FDK+ + +N +F G+
Sbjct: 40 HSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQ 99
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
+ ++ RM + + PN T+ L+ +
Sbjct: 100 LARNCIFMYSRMLHKSVSPNKFTYPPLIRA------------------------------ 129
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
C D A + GK IH V+K GF F N LI +Y ++ A+ +F + ++
Sbjct: 130 ----CCIDYAIEE-GKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQR 184
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
++VSW +LIT Y++ G D+A EVF M N +SW+A+I A+ + R EA
Sbjct: 185 DVVSWTSLITGYSQWGFVDKAREVFEL--------MPERNSVSWNAMIAAYVQSNRLHEA 236
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
LF +M+L VV + + +LS C AL G+ IHG++ + + + + +++M
Sbjct: 237 FALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDM 296
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCGCLE+ VF ++ +K + +WN MI G M+G GE A+ F+EM PDG+ F
Sbjct: 297 YCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITF 356
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
V VLSAC+H+GLV EG+ F M ++P MEH+ CMVDLLGRAGLL+EA ++ MP
Sbjct: 357 VNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMP 416
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAK 636
+ P+A V G L+ +CR+H NT++ E + ++ L +G Y+LL+N+YA++GRWED AK
Sbjct: 417 VNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAK 476
Query: 637 VRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
VR +G+KK G S IE + + F +G K + L+E+ + + G VPD
Sbjct: 477 VRKLMNDRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPD 536
Query: 697 NDIILWEM 704
D +L ++
Sbjct: 537 TDGVLHDI 544
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 187/368 (50%), Gaps = 17/368 (4%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA--RFGRLFDARNVFETAPFDCKS 95
L C T+ +LKQ H+Q+I G +A RV+ A + G L A VF+ P
Sbjct: 27 LDSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIP---HP 83
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ ++N+I R + L N + +Y +M V + FT+P +IRAC + G
Sbjct: 84 DAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRAC----CIDYAIEEG 139
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ +H HVL+ GF + +N LI MY + + ++FD + ++ +SW + +G++
Sbjct: 140 KQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQW 199
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
D A E+F+ M E N V+W ++++++ + RL E LFD MR + +
Sbjct: 200 GFVDKAREVFELMP----ERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVA 255
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
A +LS C L A GK IHG++ K G E + +I +Y K G ++ A +F+E+ +
Sbjct: 256 ASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQ 315
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
K I SWN +I A G + A+E+F ++E+ M P+ I++ V+ A A +G EE
Sbjct: 316 KGISSWNCMIGGLAMHGKGEAAIELFKEMER----EMVAPDGITFVNVLSACAHSGLVEE 371
Query: 396 ALDLFRKM 403
F+ M
Sbjct: 372 GKHYFQYM 379
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 166/343 (48%), Gaps = 21/343 (6%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+++ Y+++G + AR VFE P + +S+ WN+++ V + A L+ +MR V
Sbjct: 192 LITGYSQWGFVDKAREVFELMP---ERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENV 248
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ D F ++ AC +G+ G+ +H ++ + G + + + +I MY K G +
Sbjct: 249 VLDKFVAASMLSACTGLGALEQ----GKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLE 304
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ ++F+++ K SWN M G A++ + A+ELFK ME E + P+ +T+ ++LS+ A
Sbjct: 305 KASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACA 364
Query: 249 RCGRLEETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLA-ADHMGKVIHGFVIKGGFEDY 306
G +EE F M + G++ G E ++ + + K+I+ +
Sbjct: 365 HSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPD---- 420
Query: 307 VFVKNALICVYGKHGDVKVAQNLFS---EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
V AL+ HG+ ++ + + E+E N + L YA AG ++ +V
Sbjct: 421 AGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKL 480
Query: 364 LEKLDGGSMERP--NVISWSAVIGAFASNGRGE-EALDLFRKM 403
+ D G + P ++I + + F + GR +A +++ K+
Sbjct: 481 MN--DRGVKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKL 521
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 329 bits (843), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 199/689 (28%), Positives = 343/689 (49%), Gaps = 112/689 (16%)
Query: 14 PSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIY 73
P +P I+ ++ +L + C + + Q+H QLIV+G A R +
Sbjct: 45 PEEDDQPLPILKLSHPILRTLESC---CGSTKEFNQIHTQLIVSGLLQQPLAAGRAVKTL 101
Query: 74 ARF-GRLFDARNVFETAPFDCKSSSLLWNSILRVNVS-NGLYENALKLYVKMRKLGVLGD 131
F + A ++FE + + + N+I+R V+ N Y Y +M + V +
Sbjct: 102 CSFPDSVQHAVSLFEGLE---EPDAFICNTIMRTYVNVNDPYTALGFYYEQMVRKCVAPN 158
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
+TFPL+++ C +GS G+ +H +L+ GF+ ++ + N LI MY+ G++ D+
Sbjct: 159 HYTFPLLVKVCWEIGSI----GDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDAR 214
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
+F+ + + VTW S++ + + G
Sbjct: 215 AMFEVCSISD-----------------------------------LVTWNSMIDGYVKNG 239
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
+ +LF+ M +R + F N
Sbjct: 240 EIGAARELFEEMPERDL---------------------------------------FSWN 260
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
++I Y +GD+ A++LF+++ ++IVSWN +I YA+ + A E+F+
Sbjct: 261 SMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNW-------- 312
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
M NV+SW+ ++ + +E L +F KM + + + N T+ +L+ CA L+ G
Sbjct: 313 MPYRNVVSWNIMLALYVRIKDYDECLRMFDKM-MGETMPNEATLVSVLTACAHLGRLDRG 371
Query: 432 REIHGHVV--RVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
+ IH ++ RV + ++L+ LL MY KCG ++ VF+++ + +++WNSMI GYG
Sbjct: 372 KWIHSYIKNNRV-IEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYG 430
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
M+G + AL F +M + G P+ F+ VLSAC+H+G++ EG FD+M R ++IEP++
Sbjct: 431 MHGQADKALEMFLDMEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKV 490
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
EHY CMVDLLGRAGL+++ ++++ MPME +WG LL++CR H N+++AE +A ++
Sbjct: 491 EHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIE 550
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK----------- 658
L G Y+LLSNIYAA G+W+D VR K +GL K G SW+ ++
Sbjct: 551 LEPRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKERGLTKTTGFSWVHIEEFGTQSFVEKA 610
Query: 659 ---RKIHMFSSGNSLQSDLKNVCEVLEEL 684
RK M+S + + + +K C +E+
Sbjct: 611 SVHRKSMMYSILSDMATQMKLSCGDYDEV 639
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 329 bits (843), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 192/725 (26%), Positives = 358/725 (49%), Gaps = 111/725 (15%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S Y + LF AR +FE+ + + W ++ N + A LY +M + GV
Sbjct: 83 MVSGYVKSRNLFRARELFESM---FSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGV 139
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D TF ++ + + +H+H+++ GF ++ + N L+ Y K +
Sbjct: 140 KPDHITFATLLSGFDDTTTLKEVLQ----IHSHIIRFGFSASLIVFNSLVDSYCKTCCLD 195
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ +LF ++ K+ +S+N+M +G+ + AL+LF +M +P+ T+ ++L
Sbjct: 196 IASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAML---- 251
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
G+ VG+E + G+ IHG IK + +F
Sbjct: 252 ------------------GMSVGSEDVI-------------FGQQIHGLAIKTSYVWDIF 280
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVS---------WNA---------------- 343
V NAL+ Y KH + +A+NLF E+ E + VS WN
Sbjct: 281 VANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTS 340
Query: 344 --------------------------------LITSYAEAGLCDEAVEVFSQLEKLDGGS 371
+ T+ +E + + V+++++ EK + +
Sbjct: 341 FDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDAN 400
Query: 372 -----MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
+ N + W+A+I + G EEAL +F++M V + T + L A A
Sbjct: 401 RIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLA 460
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
++++G+++H V+R+ + ++ + L++MY CG +++ VF+++ ++++ WN++IS
Sbjct: 461 SVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALIS 520
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
Y NG E ++F +MIE+G PD V+F++VL+ACSH GLV + F+ M + ++++
Sbjct: 521 AYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLD 580
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
P+ +HYA M+D+L R+G EA +++ MP EP+ +W ++LNSCR+HKN D+A+ A Q
Sbjct: 581 PRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQ 640
Query: 607 IFGLIT-ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFS 665
+F + +Y+ +SNIYA +G+WE+AAKV+ + + +G+KKV SW+E+ ++H+F+
Sbjct: 641 LFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFT 700
Query: 666 SGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKH 725
+ + + + + L M+ +G PD L +NV +I + S+
Sbjct: 701 ANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTL------QNVDEEMKIESLKYHSER 754
Query: 726 RIVGF 730
+ F
Sbjct: 755 LAIAF 759
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 134/628 (21%), Positives = 253/628 (40%), Gaps = 111/628 (17%)
Query: 29 SLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
+LL FD T+ ++ Q+H+ +I G +AS + ++ Y + L A +F
Sbjct: 148 TLLSGFD----DTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSE 203
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
P S+ +N ++ G E ALKL+++MR + GFTF ++ M
Sbjct: 204 MP---TKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLG----MSVG 256
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
FGQ +H ++ + ++ + N L+ Y+K + + LFD++ + +S+N++
Sbjct: 257 SEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNII 316
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS---------------------- 246
+G+A N + + +LFKR++ + + ++LS
Sbjct: 317 ITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTA 376
Query: 247 -------------HARCGRLEE-------------------------------TMDLFDM 262
+A+C + E+ + +F
Sbjct: 377 VSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKE 436
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
M + + A L A+LA+ +GK +H VI+ G VF + L+ +Y G
Sbjct: 437 MNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGS 496
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
+K A +F E+ ++NIV WNALI++Y++ G + F+ + ++ G P+ +S+ +
Sbjct: 497 MKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADM--IESGLY--PDSVSFLS 552
Query: 383 VIGAFASNGRGEEALDLFRKM-QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
V+ A + G E+AL F M Q+ K+ + ++ V S N E + +
Sbjct: 553 VLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFN---EAENLISEM 609
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHL-------VFEQIEKKDLITWNSMISGYGMNGLG 494
+ ++ + +LN C + L +F+ +D + +M + Y G
Sbjct: 610 PFEPDEVMWSSVLN---SCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKW 666
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA- 553
ENA + M E G K + H N+ R PQ E
Sbjct: 667 ENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTAND------------RTHPQTEQIRR 714
Query: 554 ---CMVDLLGRAGLLQEASDIVKNMPME 578
+V+L+ + G + S ++N+ E
Sbjct: 715 KINSLVELMDKEGYKPDTSCTLQNVDEE 742
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 192/432 (44%), Gaps = 45/432 (10%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
V +++ GF + N + + Q++ + +LFD++ +N S NMM SG+ + +
Sbjct: 33 VDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRN 92
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
A ELF+ M N V+WT ++ +++ + +E +L+ M + G++ A
Sbjct: 93 LFRARELFESM----FSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFAT 148
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
+LS D IH +I+ GF +
Sbjct: 149 LLSGFDDTTTLKEVLQIHSHIIRFGFS-------------------------------AS 177
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
++ +N+L+ SY + D A ++FS++ D +S++ +I + G EEAL
Sbjct: 178 LIVFNSLVDSYCKTCCLDIASQLFSEMPTKDS--------VSFNVMITGYTKYGFREEAL 229
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
LF +M+ + T + +L + S + G++IHG ++ S +I V N LL+ Y
Sbjct: 230 KLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFY 289
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
K ++ +F+++ + D +++N +I+GY NG E + F+ + F F
Sbjct: 290 SKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFA 349
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
+LS + ++ GR+ V + +++ +VD+ + ++A+ I N+
Sbjct: 350 TMLSVAAIELNLSMGRQTHAQAVVTTAVS-EVQVGNALVDMYAKCEKFEDANRIFANLAY 408
Query: 578 EPNAYVWGTLLN 589
N+ W +++
Sbjct: 409 R-NSVPWTAIIS 419
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 329 bits (843), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 195/613 (31%), Positives = 324/613 (52%), Gaps = 21/613 (3%)
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
G + DA ++ P S + +++ V N L ++AL ++ +M GV + T
Sbjct: 193 GSVRDAVELYRQCPL---CSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLV 249
Query: 137 LVIRACKFMGSFRFRFSF-GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
VI+AC G F S G + +++L N+ + N LI +Y + G + ++FD
Sbjct: 250 SVIKACIGAGEFDLAMSIVGLAMKSNLLD----KNLGVRNSLITLYLRKGDADAARRMFD 305
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ V++ +SW + +A D +GA + M E N V+W +L++ H + G +E
Sbjct: 306 EMEVRDVVSWTALLDVYAELGDLEGARRVLDEMP----ERNEVSWGTLVARHEQKGNAKE 361
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
+ L+ M G + VL CA L G+ IH +K + VFV +ALI
Sbjct: 362 AVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALID 421
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
+Y K + AQ +F + +KNIV WN+LI+ Y+ EA E+F + M
Sbjct: 422 MYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKK--------MPAR 473
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH 435
NV SW+++I +A N + +AL F M + +T S +L CA +L +G+ +H
Sbjct: 474 NVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVH 533
Query: 436 GHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
++++ + ++I V L +MY K G L+ VF ++ K++ + W +MI G NG E
Sbjct: 534 AKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAE 593
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
++ FE+MI AG P+ F+A+L ACSH+GLV F+MM + I P+ +HY CM
Sbjct: 594 ESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMM-QACGISPKAKHYTCM 652
Query: 556 VDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETT 615
VD+L RAG L EA D++ + + A W LL++C +++N ++ E A ++ L + T
Sbjct: 653 VDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNT 712
Query: 616 GSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLK 675
Y+LLSN+YA+ G+W+DAA++RI K LKK G SW++++ + F S + L
Sbjct: 713 AGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIRGQYQAFFSWETKHPLLP 772
Query: 676 NVCEVLEELALQM 688
+V E+L+ L ++
Sbjct: 773 DVYEMLDLLTWEL 785
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 197/445 (44%), Gaps = 46/445 (10%)
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN 236
++ + K G + + +LFD + ++ +S+ M A+EL+++ L + P
Sbjct: 154 MVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSV-PF 212
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
F T++++ ++ + +F M G+ + V+ C + I G
Sbjct: 213 F---TAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVG 269
Query: 297 FVIKGGFEDY-VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
+K D + V+N+LI +Y + GD A+ +F E+E +++VSW AL+ YAE G +
Sbjct: 270 LAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLE 329
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
A V + M N +SW ++ G +EA+ L+ +M N
Sbjct: 330 GARRVLDE--------MPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCF 381
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
S +L CA L GR+IH ++++ + N+ V + L++MY KC L + ++F + +
Sbjct: 382 SSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQ 441
Query: 476 KDLITWNSMISGYGMN--------------------------GLGEN-----ALATFEEM 504
K+++ WNS+ISGY N G +N AL +F M
Sbjct: 442 KNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAM 501
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+ +G P + F +VL AC+ + G+ + +++ I+ + + D+ ++G
Sbjct: 502 LASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIK-LGIKESIFVGTALSDMYAKSGD 560
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLN 589
L + + MP N W ++
Sbjct: 561 LDSSKRVFYEMPKR-NDVAWTAMIQ 584
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 174/395 (44%), Gaps = 52/395 (13%)
Query: 31 LDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
+ CF +L C ++ L+ ++HNQ + + + F+++ ++ +Y + +L DA+ +F
Sbjct: 378 ISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFY 437
Query: 88 TAP---FDCKSSSL-------------------------LWNSILRVNVSNGLYENALKL 119
+ P C +S + WNSI+ N + +ALK
Sbjct: 438 SLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKS 497
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
+ M G TF V+ AC + S G++VH ++++G + ++ + L
Sbjct: 498 FHAMLASGQSPGEITFSSVLLACASLCSLE----MGKMVHAKIIKLGIKESIFVGTALSD 553
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MYAK G + S ++F ++ +N ++W M G A N + ++ LF+ M G+ PN T
Sbjct: 554 MYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQT 613
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK---VIHG 296
+ ++L + + G +E M F+MM+ GI A+ ++ V A A H+ + ++
Sbjct: 614 FLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLAR--AGHLAEAEDLLLK 671
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
K + + +A K + A+ L E+++ N + L YA G +
Sbjct: 672 IESKSEANSWAALLSACNIYRNKEMGERAAKRL-QELDKDNTAGYVLLSNMYASCGKWKD 730
Query: 357 AVEVFSQLE----KLDGGSMERPNVISWSAVIGAF 387
A E+ ++ K DGG SW + G +
Sbjct: 731 AAEMRILMKGINLKKDGG-------CSWVQIRGQY 758
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 151/329 (45%), Gaps = 50/329 (15%)
Query: 301 GGFEDYV--------FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
G F D V F + ++ + K GD+ A+ LF + E+++VS+ ++ + + G
Sbjct: 134 GAFRDCVSVVGAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRG 193
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+AVE++ Q +V ++A+I F N ++AL +F +M V N
Sbjct: 194 SVRDAVELYRQCPLC--------SVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNE 245
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVS-MNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
+T+ ++ C + ++ I G ++ + ++KN+ V+N L+ +Y++ G + +F+
Sbjct: 246 ITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFD 305
Query: 472 QIEKKDLITWNSMISGYG-------------------------------MNGLGENALAT 500
++E +D+++W +++ Y G + A++
Sbjct: 306 EMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSL 365
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
+ +M+ G +P+ F +VL AC+ + GR+I + ++ + + ++D+
Sbjct: 366 YSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLK-MACSNNVFVSSALIDMYC 424
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ L +A I ++P + N W +L++
Sbjct: 425 KCKQLPDAQMIFYSLP-QKNIVCWNSLIS 452
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 329 bits (843), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 180/521 (34%), Positives = 289/521 (55%), Gaps = 40/521 (7%)
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
Q + +N++I + G + + ++F +R KN I+WN + G ++ D +E +
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIG--ISKDPSRMMEAHQL 115
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
+ E EP+ ++ +LS + R E+ FD M + A
Sbjct: 116 FD-EIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKD-------------------A 155
Query: 288 DHMGKVIHGFVIKGGFED-----YVFVK------NALICVYGKHGDVKVAQNLFSEIEEK 336
+I G+ +G E Y ++ NA+I Y + GD++ A + F +
Sbjct: 156 ASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVR 215
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
+V+W A+IT Y +A + A +F + N+++W+A+I + N R E+
Sbjct: 216 GVVAWTAMITGYMKAKKVELAEAMFKDM-------TVNKNLVTWNAMISGYVENSRPEDG 268
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
L LFR M + NS +S L C+E +AL +GR+IH V + ++ ++ L++M
Sbjct: 269 LKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISM 328
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCG L + +FE ++KKD++ WN+MISGY +G + AL F EMI+ +PD + F
Sbjct: 329 YCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
VAVL AC+HAGLVN G F+ MVR++++EPQ +HY CMVDLLGRAG L+EA ++++MP
Sbjct: 389 VAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP 448
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAK 636
P+A V+GTLL +CR+HKN ++AE A ++ L ++ Y+ L+NIYA+ RWED A+
Sbjct: 449 FRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVAR 508
Query: 637 VRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
VR K + KV G SWIE++ K+H F S + + +L ++
Sbjct: 509 VRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSI 549
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 138/337 (40%), Gaps = 51/337 (15%)
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA-EAGLCD 355
++ K +D +F N +I + GD+ A +F + KN ++WN+L+ + +
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
EA ++F ++ + P+ S++ ++ + N E+A F +M + + I
Sbjct: 111 EAHQLFDEIPE--------PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMI 162
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
+G A + RE+ + M KN + N +++ Y++CG LE+ F+
Sbjct: 163 TGY----ARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFFKVAPV 214
Query: 476 KDLITWNS--------------------------------MISGYGMNGLGENALATFEE 503
+ ++ W + MISGY N E+ L F
Sbjct: 215 RGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRA 274
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M+E G +P+ + L CS + GR+I +V + + + ++ + + G
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ-IVSKSTLCNDVTALTSLISMYCKCG 333
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
L +A + + M + + W +++ H N D A
Sbjct: 334 ELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNADKA 369
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 90/171 (52%), Gaps = 5/171 (2%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN+++ V N E+ LKL+ M + G+ + + C + + + G+ +H
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQL----GRQIH 307
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
V + +V + LI MY K G++ D++KLF+ ++ K+ ++WN M SG+A + + D
Sbjct: 308 QIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNAD 367
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIE 269
AL LF+ M + P+++T+ ++L + G + M F+ M+R +E
Sbjct: 368 KALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418
>gi|449439631|ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 555
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 178/547 (32%), Positives = 290/547 (53%), Gaps = 58/547 (10%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
H ++ GF +I+N L+ +Y G + + K+F+ +
Sbjct: 46 THAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITA------------------ 87
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
P+ W ++ H R +++++LF M G+E +
Sbjct: 88 -----------------PSTTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSF 130
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD-----VKVAQNLFSE 332
+LS C G+ IHG V+ G+ ++V+ LI +Y GD +K A LF E
Sbjct: 131 LLSACVRSRLFREGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDE 190
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ + N+V WN+L+ Y G D A +VF + M NV +W+ ++ FA NG+
Sbjct: 191 MPDSNVVGWNSLLAGYVRRGDFDGARKVFDE--------MPERNVRTWTIMVAGFAQNGQ 242
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV--- 449
+ AL LF +M+ A V + V + LS CAE L +G+ IHG+V R ++++ V
Sbjct: 243 CKLALSLFDQMRRAGVELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVS 302
Query: 450 -QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
N L++MY CG ++ + +FE+I +++ ++W+S+I+G+ G G A+ F+ M+ +G
Sbjct: 303 LNNALIHMYASCGAMDLAYKLFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIFQLMLCSG 362
Query: 509 ---FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
+PD + F+ L+ACSHAGL+++G R+F M + F + PQ+EHY CMVDLL RAGLL
Sbjct: 363 QNEVRPDEITFIGALTACSHAGLISDGIRLFQSMHKTFGVIPQIEHYGCMVDLLSRAGLL 422
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI---TETTGSYMLLS 622
EA ++++MPM+PN VWG LL+ CR+HKN ++ +A + I + G +MLL+
Sbjct: 423 TEALSLIESMPMKPNNAVWGALLSGCRLHKNDEIVSHVAKHLSFEIDPNNQAAGYFMLLA 482
Query: 623 NIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLE 682
N+YAA GRW+D A VR + G+KK +G+SWIE+ + F G D+ + E+L
Sbjct: 483 NVYAADGRWQDTATVRRNMHDIGVKKPSGRSWIEINGVLCSFMVGEETHKDVNLIYEMLG 542
Query: 683 ELALQME 689
+ Q +
Sbjct: 543 NITRQTQ 549
Score = 196 bits (497), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 121/380 (31%), Positives = 204/380 (53%), Gaps = 27/380 (7%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE--TAPFDCK 94
+L+ C + L + H Q++V+G + ++ +LS+Y FG L A+ VFE TAP
Sbjct: 33 VLKSCVSFRNLAKTHAQIVVSGFSQKNYILNHLLSLYISFGSLGSAQKVFEDITAP---- 88
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR-FS 153
S+ +WN I++ + + + +++L+ +M GV +GFT+ ++ AC R R F
Sbjct: 89 -STTVWNQIIKGHTRSKTSKKSIELFKRMTLAGVEANGFTYSFLLSAC-----VRSRLFR 142
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD-----SFKLFDKVRVKNYISWNMM 208
G+ +H VL G+ N+++ LI +YA G D + LFD++ N + WN +
Sbjct: 143 EGEQIHGRVLVNGYWSNLYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGWNSL 202
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+G+ D DGA ++F M E N TWT +++ A+ G+ + + LFD MR+ G+
Sbjct: 203 LAGYVRRGDFDGARKVFDEMP----ERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGV 258
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY----VFVKNALICVYGKHGDVK 324
E+ A+ LS CA+L +GK IHG+V + + V + NALI +Y G +
Sbjct: 259 ELDQVALVAALSACAELGDLTLGKWIHGYVERTWRSRHLPVLVSLNNALIHMYASCGAMD 318
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
+A LF EI ++N VSW+++IT +A+ G EA+ +F QL G + RP+ I++ +
Sbjct: 319 LAYKLFEEIPQRNTVSWSSIITGFAKQGCGVEAIRIF-QLMLCSGQNEVRPDEITFIGAL 377
Query: 385 GAFASNGRGEEALDLFRKMQ 404
A + G + + LF+ M
Sbjct: 378 TACSHAGLISDGIRLFQSMH 397
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 199/657 (30%), Positives = 335/657 (50%), Gaps = 54/657 (8%)
Query: 59 ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
AN + +++ G L A +F+ P + W ++ + +G + A+
Sbjct: 7 ANLQPCQSIKLIKTCLNSGDLKRALYLFDKIP---EPDLRTWTILISGHTQHGFPKKAID 63
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
+Y + V D F V +AC G + +H+ +Q GF ++ + N LI
Sbjct: 64 IYSTLLSRNVRPDKFVLLSVAKACAASGDL----VVAKKIHDDAIQFGFNKDLVLGNALI 119
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
M+ K ++ + +FD + VK+ +SW
Sbjct: 120 DMFGKCKFVNGARCVFDDMVVKDVVSW--------------------------------- 146
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
TS+ + CG + + LF M GI + ++ +L CAD +G+ +HGF+
Sbjct: 147 --TSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIK--LGREVHGFI 202
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
++ E V+V +AL+ +Y +K A+ +F + ++IVSWN ++T+Y + +
Sbjct: 203 LRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGL 262
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
+F Q+ K +G + N SW+A I NG+ E AL + KMQ + + N +TI
Sbjct: 263 GLFHQMRK-EGIKL---NQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSA 318
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
L C +L G+EIHG+V R +++ + L+ +Y KCG LE VF + +KD+
Sbjct: 319 LPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDV 378
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
+ WN+MI M+G G +L F +M+++G +P+ V F+ VLS CSH+ L +EG +F+
Sbjct: 379 VAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNS 438
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
M E I P +HY+CMVD+L RAG L+EA D ++ MP+EP A WG LL +CR++KN +
Sbjct: 439 MSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNVE 498
Query: 599 VAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
+ ASQ+F + + G+Y+LLSNI + +W +A+++R + KGL K G+SW++VK
Sbjct: 499 LGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQVK 558
Query: 659 RKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQR 715
K++ F +G+ + L+E+ +M G P+ D +L +NV + QR
Sbjct: 559 NKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVL------QNVDQEQR 609
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 180/356 (50%), Gaps = 13/356 (3%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K++H+ I G N L ++ ++ + + AR VF+ + W S+
Sbjct: 97 KKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVV---KDVVSWTSMTYCY 153
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
V+ G+ + L+ +M G+ + T ++ AC G+ VH +L+
Sbjct: 154 VNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY------IKLGREVHGFILRNEM 207
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+GNV++ + L+ MYA + + +FD + ++ +SWN+M + + LN + + L LF +
Sbjct: 208 EGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQ 267
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M EG++ N +W + +S + G+ E + + M+ GI+ I L C +L +
Sbjct: 268 MRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLES 327
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
GK IHG+V + F + V + AL+ +Y K GD+++++++F+ + K++V+WN +I +
Sbjct: 328 LRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMA 387
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+ G E++ +F+++ LD G PN +++ V+ + + +E L +F M
Sbjct: 388 NSMHGKGGESLILFNKM--LDSGV--EPNSVTFIGVLSGCSHSQLADEGLLVFNSM 439
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 198/656 (30%), Positives = 344/656 (52%), Gaps = 82/656 (12%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH + G A AF+ ++ Y+ G + AR VF+ F + W ++
Sbjct: 126 VHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYF---KDMVSWTGMVACYAE 182
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
N +E++L L+ +MR +G + FT +++C + +F+ G+ VH L++ +
Sbjct: 183 NYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKV----GKSVHGCALKVCYDR 238
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
++++ L+ +Y K G++++ A + F+ M
Sbjct: 239 DLYVGIALLELYTKSGEIAE-------------------------------AQQFFEEMP 267
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE-AIAVVLSVCADLAAD 288
+ L P W+ ++S +A+ + +E ++LF MR+ + V A VL CA L
Sbjct: 268 KDDLIP----WSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVLL 323
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
++G IH V+K G + VFV NAL+ V Y
Sbjct: 324 NLGNQIHSCVLKVGLDSNVFVSNALMDV-------------------------------Y 352
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
A+ G + +V++F+ GS E+ N ++W+ +I + G GE+AL+LF M +
Sbjct: 353 AKCGEIENSVKLFT-------GSTEK-NEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDI 404
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
VT S +L A AL GR+IH ++ NK+ +V N L++MY KCG +++ L
Sbjct: 405 QPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARL 464
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
F++++K+D ++WN++I GY ++GLG AL F+ M ++ KP+ + FV VLSACS+AGL
Sbjct: 465 TFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGL 524
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+++GR F M++++ IEP +EHY CMV LLGR+G EA ++ +P +P+ VW LL
Sbjct: 525 LDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALL 584
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
+C +HKN D+ + A ++ + + +++LLSN+YA + RW++ A VR + K K +KK
Sbjct: 585 GACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKK 644
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G SW+E + +H F+ G++ ++K + +LE L + + G VPD ++L ++
Sbjct: 645 EPGLSWVENQGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDV 700
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+Q+H+ I T N + +A ++ +YA+ GR+ DAR F+ K + WN+++
Sbjct: 428 RQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMD---KQDEVSWNALICGY 484
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRFSFGQIVHNHVLQMG 166
+GL AL L+ M++ + TF V+ AC G + R F ++ ++ G
Sbjct: 485 SIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDY----G 540
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
+ + ++ + + GQ ++ KL ++
Sbjct: 541 IEPCIEHYTCMVWLLGRSGQFDEAVKLIGEI 571
Score = 40.0 bits (92), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/144 (18%), Positives = 59/144 (40%), Gaps = 35/144 (24%)
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
N G+ +H H+++ + ++ QN LLN Y+ G LE+ +F+++ + +++ ++ G+
Sbjct: 20 NAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGF 79
Query: 489 GMN-----------------------------------GLGENALATFEEMIEAGFKPDG 513
+ L + L+ + + G + D
Sbjct: 80 SRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADA 139
Query: 514 VAFVAVLSACSHAGLVNEGRRIFD 537
A++ A S G V+ R++FD
Sbjct: 140 FVGTALIDAYSVCGNVDAARQVFD 163
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 196/660 (29%), Positives = 332/660 (50%), Gaps = 91/660 (13%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K++H ++ G + F+ ++ +Y + AR VF+ + + W++++R
Sbjct: 114 KEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKM---MERDVVSWSTMIRSL 170
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ--- 164
N ++ AL+L +M + V ++ + R G+ +H +V++
Sbjct: 171 SRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM----GKAMHAYVIRNSN 226
Query: 165 ---MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
MG V L+ MYAK G + + +LF+ + K +SW
Sbjct: 227 NEHMG----VPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSW---------------- 266
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
T++++ R RLEE LF M++ I + ++
Sbjct: 267 -------------------TAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVE 307
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
C A +GK +H ++++ GF + + AL+ +YGK D++ A+ LF + ++
Sbjct: 308 CGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRD---- 363
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
V+ W+A++ A+A ++A +LF
Sbjct: 364 -----------------------------------VMIWTAMLSAYAQANCIDQAFNLFD 388
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+M+ + V VTI LLS+CA + AL++G+ +H ++ + + + ++ L++MY KCG
Sbjct: 389 QMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCG 448
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
+ +F + +D+ WN++I+G+ M+G GE AL F EM G KP+ + F+ +L
Sbjct: 449 DINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLH 508
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
ACSHAGLV EG+++F+ MV F + PQ+EHY CMVDLLGRAGLL EA +++K+MP++PN
Sbjct: 509 ACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNT 568
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISA 641
VWG L+ +CR+HKN + E A+Q+ + E G +L+SNIYAA+ RW DAA VR +
Sbjct: 569 IVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTM 628
Query: 642 KTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
KT G+KK G S IEV +H F G+ ++ + E+L E+ ++ G VPD +L
Sbjct: 629 KTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVL 688
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 170/381 (44%), Gaps = 66/381 (17%)
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
VL C ++ +GK IHGFV+K G + VFV NAL+ +YG+ V+ A+ +F ++ E++
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 159
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKL-----------------DGGSM-------- 372
+VSW+ +I S + D A+E+ ++ + D +M
Sbjct: 160 VVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHA 219
Query: 373 --------ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG------- 417
E V + +A++ +A G A LF + VV+ + I+G
Sbjct: 220 YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRL 279
Query: 418 ------------------------LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
L+ C + AL +G+++H +++R + ++ + L
Sbjct: 280 EEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATAL 339
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY KC + +F+ + +D++ W +M+S Y + A F++M +G +P
Sbjct: 340 VDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTK 399
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
V V++LS C+ AG ++ G+ + + +E R+E +VD+ + G + A +
Sbjct: 400 VTIVSLLSLCAVAGALDLGKWVHSYIDKE-RVEVDCILNTALVDMYAKCGDINAAGRLFI 458
Query: 574 NMPMEPNAYVWGTLLNSCRMH 594
+ + +W ++ MH
Sbjct: 459 E-AISRDICMWNAIITGFAMH 478
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 306/545 (56%), Gaps = 22/545 (4%)
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA-LNFDCDGALELFKRM 228
NV N +I + + G ++ + ++F+ + VK ++WN M +G++ A +LF R+
Sbjct: 4 NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
EP+ ++ +L+ + +E FD M ++ A ++ + D
Sbjct: 64 P----EPDIFSYNIMLACYLHNADVESARLFFDQM---PVKDTASWNTMISGFSQNGMMD 116
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
++ ++ NA+I Y + GD+ +A+ LF +++V+W A+IT +
Sbjct: 117 QARELFLVMPVRNSVS-----WNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGF 171
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+ G + A + F + M N+++W+A+I + N + E L LF++M +
Sbjct: 172 MKFGKIELAEKYFEE--------MPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGF 223
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
N ++S +L C+ +AL +G+++H + + ++ NI LL+MY KCG LE+
Sbjct: 224 RPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWK 283
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
+F + +KD++TWN+MISGY +G GE AL F++M + G KPD + FVAVLSAC+HAG
Sbjct: 284 LFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGF 343
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
V+ G F+ MVR++ +E + +HY C+VDLLGR G L EA D++K MP +P++ ++GTLL
Sbjct: 344 VDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLL 403
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
+CR+HKN ++AE A + L E+ Y+ L+N+YAA RW+ A VR S K + K
Sbjct: 404 GACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIK 463
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKK 708
G SWIEVK +H F SG+ + +L + E L EL +M G VPD + L + +G++
Sbjct: 464 TPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKMRLAGYVPDLEYALHD-VGEE 522
Query: 709 NVKRI 713
K+I
Sbjct: 523 QKKQI 527
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 173/377 (45%), Gaps = 34/377 (9%)
Query: 53 QLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGL 112
QL S +++ + +FG++ A FE P + + WN+++ + N
Sbjct: 151 QLFEVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPM---KNLVTWNAMIAGYIENCQ 207
Query: 113 YENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVH 172
EN LKL+ +M + G + + V+ C + + + G+ VH + + N+
Sbjct: 208 AENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKL----GKQVHQLICKSPVSWNIT 263
Query: 173 IVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG 232
L+ MY K G + D++KLF + K+ ++WN M SG+A + + AL LF +M EG
Sbjct: 264 AGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEG 323
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMG 291
++P+++T+ ++LS+ G ++ ++ F+ M+R G+E + V+ + G
Sbjct: 324 MKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLG-----RGG 378
Query: 292 KVIHG--FVIKGGFEDYVFVKNALICVYGKHGDVKVAQ----NLFSEIEEKNIVSWNALI 345
K++ + K F+ + + L+ H ++++A+ NL + ++ ++ + L
Sbjct: 379 KLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLN-LDPESAAGYVQLA 437
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW---SAVIGAFASNGRGEEAL----- 397
YA D V ++ D ++ P SW +V+ F S R L
Sbjct: 438 NVYAAMNRWDHVAMVRRSMK--DNKVIKTPGY-SWIEVKSVVHEFRSGDRIHPELAFIHE 494
Query: 398 ---DLFRKMQLAKVVAN 411
+L RKM+LA V +
Sbjct: 495 KLNELERKMRLAGYVPD 511
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 9/160 (5%)
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
+ N++ N ++ +++ G L VFE + K +TWNSM++GY N G+ +A +
Sbjct: 2 SSNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYS-NRRGKIKVA--RQ 58
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
+ + +PD ++ +L+ H V R FD M + + M+ + G
Sbjct: 59 LFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVK-----DTASWNTMISGFSQNG 113
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
++ +A ++ MP+ N+ W +++ + D+A+ +
Sbjct: 114 MMDQARELFLVMPVR-NSVSWNAMISGYVESGDLDLAKQL 152
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQVH + + + + +LS+Y + G L DA +F P + + WN+++
Sbjct: 247 KQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMP---QKDVVTWNAMISGY 303
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+G E AL L+ KMR G+ D TF V+ AC G + ++ V G
Sbjct: 304 AQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEY---FNSMVRDYGV 360
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ ++ + + G++ ++ L K+ K +
Sbjct: 361 EAKPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPH 395
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 217/736 (29%), Positives = 350/736 (47%), Gaps = 133/736 (18%)
Query: 51 HNQLIVTGANA------SAFLAA----RVLSIYARFGR--LFDARNVFETAPFDCKSSSL 98
H+ L V A + S F A ++L+ Y+R L AR VF+ P + +
Sbjct: 3 HHHLAVAAARSHASLLKSGFAAPTPWNQLLTAYSRSSPDGLAAARRVFDEVP---RRDEV 59
Query: 99 LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIV 158
WN++L + ++G + A +L M G+ + F +R+ + R + G +
Sbjct: 60 SWNALLAAHAASGAHPEAWRLLRAMHAQGLASNTFALGSALRS----AAVARRPAIGAQL 115
Query: 159 HNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
+ L+ G NV + L+ +YAK G++ D+ ++FD + +N +SWN + +G+ + D
Sbjct: 116 QSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDM 175
Query: 219 DGALELFKRMELEGLEPNFVTWTSLL---------------------------------- 244
ALELF ME EGL P+ T+ SLL
Sbjct: 176 ASALELFLEMEREGLVPDEATFASLLTAVEGPSCFLMHQLHGKIVKYGSALGLTVLNAAI 235
Query: 245 SSHARCGRLEETMDLFD---------------------------------MMRKRGIEVG 271
+++++CG L+++ +FD MM++ G+
Sbjct: 236 TAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPD 295
Query: 272 AEAIAVVLSVCADLA-ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD---VKVAQ 327
+ ++S C++ DH G+VIHG VIK E V NALI +Y ++ + ++ A
Sbjct: 296 MYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAY 355
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
F+ + K+ VSWN+++T Y++ GL
Sbjct: 356 KCFNSLVLKDTVSWNSMLTGYSQHGL---------------------------------- 381
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
+AL FR M V + S L +E A L +G++IHG V+ N
Sbjct: 382 -----SADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASND 436
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
V + L+ MY K G +++ FE+ +K + WN+MI GY +G EN F EM++
Sbjct: 437 FVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQR 496
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
D + FV ++++CSHAGLV+EG I + M ++ + +MEHYAC VDL GRAG L +
Sbjct: 497 KAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLYGRAGQLDK 556
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A ++ +MP EP+A VW TLL +CR+H N ++A +AS +F +Y+LLS++Y+
Sbjct: 557 AKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYVLLSSMYSG 616
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
G W D A V+ K +GL KV G S IEVK ++H F++ + + + E+L L LQ
Sbjct: 617 LGMWSDRATVQRVMKKRGLSKVPGWSLIEVKNEVHSFNAEDKSHPKMDEIYEMLRVL-LQ 675
Query: 688 MEN--KGCVPDNDIIL 701
+E C D DI++
Sbjct: 676 VEQMLSNC-EDEDILM 690
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 174/398 (43%), Gaps = 86/398 (21%)
Query: 41 CKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLW 100
C +HQL H +++ G+ + ++ Y++ G L D+R +F+ D + + W
Sbjct: 209 CFLMHQL---HGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIG-DIR-DLISW 263
Query: 101 NSILRVNVSNGLYENALKLYVK-MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
N++L NG+ + A+K +V+ M++ GV D ++F +I +C G + G+++H
Sbjct: 264 NAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQ---GRVIH 320
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQ---MSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
V++ +G + N LI MY + + M D++K F+ + +K+ +SWN M +G++ +
Sbjct: 321 GLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHG 380
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
AL+ F RC M + A +
Sbjct: 381 LSADALKFF-----------------------RC------------MCSENVRTDEYAFS 405
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
L ++LA +GK IHG VI GF FV ++LI +Y K G + A+ F E ++
Sbjct: 406 AALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKS 465
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
+ V WNA+I YA+ G Q E +D
Sbjct: 466 SSVPWNAMIFGYAQHG----------QAENVD---------------------------- 487
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
LF +M K + +T GL++ C+ + ++ G EI
Sbjct: 488 -ILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEI 524
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 106/223 (47%), Gaps = 10/223 (4%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H +I +G ++ F+++ ++ +Y++ G + DAR FE A KSSS+ WN+++
Sbjct: 421 KQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEAD---KSSSVPWNAMIFGY 477
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+G EN L+ +M + D TF +I +C G +I++ + G
Sbjct: 478 AQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAG---LVDEGSEILNTMETKYGV 534
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELFK 226
+ + +Y + GQ+ + KL D + + + + W + ++ + + A ++
Sbjct: 535 PLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVAS 594
Query: 227 RMELEGLEP-NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+ + EP T+ L S ++ G + + +M+KRG+
Sbjct: 595 HLFVA--EPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGL 635
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 185/618 (29%), Positives = 324/618 (52%), Gaps = 57/618 (9%)
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
AR++F+ P + + L +++ ++ L + + + G PLV+++
Sbjct: 38 ARHLFDAVP---RPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKS 94
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C + + R G+ VH H + G G++ + L+ YAK G M + K+FD++ VK+
Sbjct: 95 CAILAASRQ----GKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKD 150
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
I N + +G++ + D A LF M + +W S+++ +A G +E + LF
Sbjct: 151 PIPMNCLITGYSKSGDVVKARRLFDGM----VRRTSASWNSMIACYAHGGEYQEALRLFR 206
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
M G A IA + S+CA K G
Sbjct: 207 RMLSEGARPNAITIATMFSICA-----------------------------------KTG 231
Query: 322 DV---KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
D+ K A++L +E + +N++ AL+ Y + DEA F ++++ D V+
Sbjct: 232 DLETGKWARSLIAEQDLQNMIVHTALMEMYVKCRAIDEARREFDRMQQRD--------VV 283
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHV 438
+WS +I +A NGR E+L+LF +M+ N VT+ G+LS CA+ + +G +I HV
Sbjct: 284 AWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHV 343
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
++ + + L++MY KCG + VF ++E K +ITWNSM+ G +NG ++A+
Sbjct: 344 ESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAI 403
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
++EM E +P+ + FVA+L+AC+HAGLV++G F M + PQ+EH AC+VDL
Sbjct: 404 TLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDL 463
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
L ++G L+EA + +M +EPNA +W TLL++CR H + ++A+ AS++ L + + Y
Sbjct: 464 LCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASKLLVLEPDNSSIY 523
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
+LLSNIYA +G W D ++R ++K ++K++ SWIE+ ++H F ++ +
Sbjct: 524 VLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHKFLVQDTYHPKSAEIF 583
Query: 679 EVLEELALQMENKGCVPD 696
V++ + L +++ PD
Sbjct: 584 NVVDGMGLHLDDVDSDPD 601
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 198/455 (43%), Gaps = 79/455 (17%)
Query: 33 CFDHLLQQCKTI---HQLKQVHNQLIVTGANASAFLAARVLSIYARFG------RLFDAR 83
C +++ C + Q KQVH IV G F+ ++ YA+ G ++FD
Sbjct: 87 CVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEM 146
Query: 84 NVFETAPFDC----------------------KSSSLLWNSILRVNVSNGLYENALKLYV 121
V + P +C + +S WNS++ G Y+ AL+L+
Sbjct: 147 PVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFR 206
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
+M G + T + C G G+ + + + Q N+ + L+ MY
Sbjct: 207 RMLSEGARPNAITIATMFSICAKTGDLET----GKWARSLIAEQDLQ-NMIVHTALMEMY 261
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
K + ++ + FD+++ ++ ++W+ M +G+A N +LELF+RM+ +PN VT
Sbjct: 262 VKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVT-- 319
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
+ VLS CA L +D +G I V
Sbjct: 320 ---------------------------------LVGVLSACAQLGSDELGGQIGSHVESQ 346
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
++ +ALI +Y K G V A+++F+ +E K +++WN+++ A G +A+ ++
Sbjct: 347 NLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLY 406
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT-ISGLLS 420
++ + D +PN I++ A++ A G ++ + F++M+ V+ V + ++
Sbjct: 407 KEMTEED----VQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVD 462
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
+ +S L RE + + + + N ++ + LL+
Sbjct: 463 LLCKSGRL---REAYKFICDMEVEPNAVIWSTLLS 494
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 134/296 (45%), Gaps = 14/296 (4%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++ +Y + + +AR F+ + + W++++ NG +L+L+ +M+
Sbjct: 257 LMEMYVKCRAIDEARREFDRMQ---QRDVVAWSTMIAGYAQNGRPHESLELFERMKATSC 313
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ T V+ AC +GS G + +HV ++ + LI MY K G +
Sbjct: 314 KPNEVTLVGVLSACAQLGSDEL----GGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVG 369
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ +F+++ K I+WN M G ALN A+ L+K M E ++PN +T+ +LL++
Sbjct: 370 RARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACT 429
Query: 249 RCGRLEETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
G +++ M F M+ + E A ++ + L + + F+ E
Sbjct: 430 HAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDL---LCKSGRLREAYKFICDMEVEPNA 486
Query: 308 FVKNALICVYGKHGDVKVAQNLFSE---IEEKNIVSWNALITSYAEAGLCDEAVEV 360
+ + L+ H DV++A+ S+ +E N + L YA+AGL + E+
Sbjct: 487 VIWSTLLSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREI 542
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 328 bits (842), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 211/707 (29%), Positives = 351/707 (49%), Gaps = 88/707 (12%)
Query: 11 QFSPSNPSRPFSIITYNNSLLDCFDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAA 67
FS SN IT + L+QQC K+I + ++ + + G + S L
Sbjct: 57 HFSQSNIKIRKLCITETIQSTKLYSSLIQQCIGIKSITDITKIQSHALKRGFHHS--LGN 114
Query: 68 RVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG 127
+++ Y + G + AR VF+ P + WNS++ + NG + A+ +Y +M G
Sbjct: 115 KLIDAYLKCGSVVYARKVFDEVP---HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDG 171
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ-GNVHIVNELIGMYAKMGQ 186
+L D FTF V +A +G GQ H + +G NV + + L+ MYAK G+
Sbjct: 172 ILPDEFTFSSVFKAFSDLGLVHE----GQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGK 227
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
M D+ + D+V K+ V +T+L+
Sbjct: 228 MRDARLVSDQVVGKD-----------------------------------VVLFTALIVG 252
Query: 247 HARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY 306
++ G E++ +F M K+GIE ++ VL C +L G++IHG ++K G E
Sbjct: 253 YSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESA 312
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
V S +L+T Y GL D++++VF Q
Sbjct: 313 V-------------------------------ASQTSLLTMYYRCGLVDDSLKVFKQFIN 341
Query: 367 LDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
PN ++W++VI NGR E AL FR+M + + NS T+S +L C+ A
Sbjct: 342 --------PNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLA 393
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
L G++IH V++ ++ + V L++ Y KCG E VF + + D+++ NSMI
Sbjct: 394 MLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIY 453
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
Y NG G AL F M + G +P+ V ++ VLSAC++AGL+ EG IF IE
Sbjct: 454 SYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIE 513
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
+HYACMVDLLGRAG L+EA ++ + + + +W TLL++CR+H + ++A+ + ++
Sbjct: 514 LTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSACRIHGDVEMAKRVMNR 572
Query: 607 IFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSS 666
+ L E G+++LLSN+YA++G W +++ + + LKK SW++V+R+IH F +
Sbjct: 573 VIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMA 632
Query: 667 GNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRI 713
G+ + +++ E LEEL +++ G VPD +L ++ +K ++ +
Sbjct: 633 GDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSL 679
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 328 bits (842), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 185/618 (29%), Positives = 324/618 (52%), Gaps = 57/618 (9%)
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
AR++F+ P + + L +++ ++ L + + + G PLV+++
Sbjct: 38 ARHLFDAVP---RPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPLVVKS 94
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C + + R G+ VH H + G G++ + L+ YAK G M + K+FD++ VK+
Sbjct: 95 CAILAASRQ----GKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKD 150
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
I N + +G++ + D A LF M + +W S+++ +A G +E + LF
Sbjct: 151 PIPMNCLITGYSKSGDVVKARRLFDGM----VRRTSASWNSMIACYAHGGEYQEALRLFR 206
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
M G A IA + S+CA K G
Sbjct: 207 RMLSEGARPNAITIATMFSICA-----------------------------------KTG 231
Query: 322 DV---KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
D+ K A++L +E + +N++ AL+ Y + DEA F ++++ D V+
Sbjct: 232 DLETGKWARSLIAEQDLQNMIVHTALMEMYVKCQAIDEARREFDRMQQRD--------VV 283
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHV 438
+WS +I +A NGR E+L+LF +M+ N VT+ G+LS CA+ + +G +I HV
Sbjct: 284 AWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHV 343
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
++ + + L++MY KCG + VF ++E K +ITWNSM+ G +NG ++A+
Sbjct: 344 ESQNLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAI 403
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
++EM E +P+ + FVA+L+AC+HAGLV++G F M + PQ+EH AC+VDL
Sbjct: 404 TLYKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDL 463
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
L ++G L+EA + +M +EPNA +W TLL++CR H + ++A+ AS++ L + + Y
Sbjct: 464 LCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAASKLLVLEPDNSSIY 523
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
+LLSNIYA +G W D ++R ++K ++K++ SWIE+ ++H F ++ +
Sbjct: 524 VLLSNIYADAGLWGDVREIRDLMRSKNVQKLSAYSWIELDGEVHKFLVQDTYHPKSAEIF 583
Query: 679 EVLEELALQMENKGCVPD 696
V++ + L +++ PD
Sbjct: 584 NVVDGMGLHLDDVDSDPD 601
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/455 (22%), Positives = 198/455 (43%), Gaps = 79/455 (17%)
Query: 33 CFDHLLQQCKTI---HQLKQVHNQLIVTGANASAFLAARVLSIYARFG------RLFDAR 83
C +++ C + Q KQVH IV G F+ ++ YA+ G ++FD
Sbjct: 87 CVPLVVKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEM 146
Query: 84 NVFETAPFDC----------------------KSSSLLWNSILRVNVSNGLYENALKLYV 121
V + P +C + +S WNS++ G Y+ AL+L+
Sbjct: 147 PVKDPIPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFR 206
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
+M G + T + C G G+ + + + Q N+ + L+ MY
Sbjct: 207 RMLSEGARPNAITIATMFSICAKTGDLET----GKWARSLIAEQDLQ-NMIVHTALMEMY 261
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
K + ++ + FD+++ ++ ++W+ M +G+A N +LELF+RM+ +PN VT
Sbjct: 262 VKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERMKATSCKPNEVT-- 319
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
+ VLS CA L +D +G I V
Sbjct: 320 ---------------------------------LVGVLSACAQLGSDELGGQIGSHVESQ 346
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
++ +ALI +Y K G V A+++F+ +E K +++WN+++ A G +A+ ++
Sbjct: 347 NLPLTSYLGSALIDMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLY 406
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT-ISGLLS 420
++ + D +PN I++ A++ A G ++ + F++M+ V+ V + ++
Sbjct: 407 KEMTEED----VQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVD 462
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
+ +S L RE + + + + N ++ + LL+
Sbjct: 463 LLCKSGRL---REAYKFICDMEVEPNAVIWSTLLS 494
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 134/296 (45%), Gaps = 14/296 (4%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++ +Y + + +AR F+ + + W++++ NG +L+L+ +M+
Sbjct: 257 LMEMYVKCQAIDEARREFDRMQ---QRDVVAWSTMIAGYAQNGRPHESLELFERMKATSC 313
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ T V+ AC +GS G + +HV ++ + LI MY K G +
Sbjct: 314 KPNEVTLVGVLSACAQLGSDEL----GGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVG 369
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ +F+++ K I+WN M G ALN A+ L+K M E ++PN +T+ +LL++
Sbjct: 370 RARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITFVALLTACT 429
Query: 249 RCGRLEETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
G +++ M F M+ + E A ++ + L + + F+ E
Sbjct: 430 HAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDL---LCKSGRLREAYKFICDMEVEPNA 486
Query: 308 FVKNALICVYGKHGDVKVAQNLFSE---IEEKNIVSWNALITSYAEAGLCDEAVEV 360
+ + L+ H DV++A+ S+ +E N + L YA+AGL + E+
Sbjct: 487 VIWSTLLSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVREI 542
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 328 bits (842), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 198/668 (29%), Positives = 325/668 (48%), Gaps = 129/668 (19%)
Query: 149 RFRFSFGQIVHNHVLQMGFQ-------GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
R F G + N L Q N N +I Y K G + ++ KLFD + +
Sbjct: 49 RSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERT 108
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS---------------- 245
++W ++ G++ A ELF +M+ G EP++VT+ +LLS
Sbjct: 109 AVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQT 168
Query: 246 -------------------SHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
S+ + RL+ LF M E+ + A VL CA++
Sbjct: 169 QIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP----EIDSFTFAAVL--CANIG 222
Query: 287 ADH--MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV--------------------- 323
D +G+ IH FVIK F VFV NAL+ Y KH V
Sbjct: 223 LDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVI 282
Query: 324 ----------KVAQNLFSEIE-----------------EKNIVSW--------------- 341
K A +LF E++ N + W
Sbjct: 283 ISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTA 342
Query: 342 -------NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
N+L+ YA+ G +EA +F+ L + + W+A+I A+ G E
Sbjct: 343 DSEILVGNSLVDMYAKCGKFEEAEMIFTNLT--------HRSAVPWTAMISAYVQKGFYE 394
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
E L LF KM+ A V+A+ T + LL A A+L++G+++H +++ N+ + LL
Sbjct: 395 EGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALL 454
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
++Y KCG +++ F+++ +++++WN+MIS Y NG E L +F+EM+ +G +PD V
Sbjct: 455 DVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSV 514
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
+F+ VLSACSH+GLV EG F+ M + ++++P+ EHYA +VD+L R+G EA ++
Sbjct: 515 SFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAE 574
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT-ETTGSYMLLSNIYAASGRWED 633
MP++P+ +W ++LN+CR+HKN ++A A Q+F + Y+ +SNIYAA+G+WE+
Sbjct: 575 MPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWEN 634
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
+KV + + +G+KK+ SW+E+K + HMFS+ + ++ + + ++ L ME G
Sbjct: 635 VSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGY 694
Query: 694 VPDNDIIL 701
PD L
Sbjct: 695 KPDTSCAL 702
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 221/481 (45%), Gaps = 49/481 (10%)
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
+ S + R + + +++ GF + N +G + K G++S + +LF+K+ KN +S
Sbjct: 21 LQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVS 80
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
NMM SG+ + + A +LF M +E VTWT L+ +++ + +E +LF M+
Sbjct: 81 TNMMISGYVKSGNLGEARKLFDGM----VERTAVTWTILIGGYSQLNQFKEAFELFVQMQ 136
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
+ G E +LS C + + +IK G++ + V N L+ Y K +
Sbjct: 137 RCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLD 196
Query: 325 VAQNLFSEIEE-----------------------------------KNIVSWNALITSYA 349
+A LF E+ E N+ NAL+ Y+
Sbjct: 197 LACQLFKEMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYS 256
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+ +A ++F ++ + DG +S++ +I +A +G+ + A DLFR++Q
Sbjct: 257 KHDSVIDARKLFDEMPEQDG--------VSYNVIISGYAWDGKHKYAFDLFRELQFTAFD 308
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
+ +LS+ + + +GR+IH + + + ILV N L++MY KCG EE ++
Sbjct: 309 RKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMI 368
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F + + + W +MIS Y G E L F +M +A D F ++L A + +
Sbjct: 369 FTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASL 428
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ G+++ +++ + A ++D+ + G +++A + MP + N W +++
Sbjct: 429 SLGKQLHSFIIKSGFMSNVFSGSA-LLDVYAKCGSIKDAVQTFQEMP-DRNIVSWNAMIS 486
Query: 590 S 590
+
Sbjct: 487 A 487
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 179/362 (49%), Gaps = 19/362 (5%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+Q+H Q IVT A++ + ++ +YA+ G+ +A +F S++ W +++
Sbjct: 331 RQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNL---THRSAVPWTAMISAY 387
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
V G YE L+L+ KMR+ V+ D TF ++RA + S S G+ +H+ +++ GF
Sbjct: 388 VQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASL----SLGKQLHSFIIKSGF 443
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
NV + L+ +YAK G + D+ + F ++ +N +SWN M S +A N + + L+ FK
Sbjct: 444 MSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKE 503
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK-RGIEVGAEAIAVVLS-VCADL 285
M L GL+P+ V++ +LS+ + G +EE + F+ M + ++ E A V+ +C
Sbjct: 504 MVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSG 563
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV--KVAQNLFSEIEEKNIVSWNA 343
+ K++ I + V NA C K+ ++ + A LF+ E ++ +
Sbjct: 564 RFNEAEKLMAEMPIDPDEIMWSSVLNA--CRIHKNQELARRAADQLFNMEELRDAAPYVN 621
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV---IGAFASNGRGEEALDLF 400
+ YA AG + +V + D G + P SW + F++N R ++
Sbjct: 622 MSNIYAAAGQWENVSKVHKAMR--DRGVKKLP-AYSWVEIKHETHMFSANDRCHPQIEEI 678
Query: 401 RK 402
RK
Sbjct: 679 RK 680
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/523 (22%), Positives = 223/523 (42%), Gaps = 72/523 (13%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+Q+H+ +I T + F++ +L Y++ + DAR +F+ P + + +N I+
Sbjct: 230 QQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMP---EQDGVSYNVIISGY 286
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+G ++ A L+ +++ F F ++ + S + G+ +H +
Sbjct: 287 AWDGKHKYAFDLFRELQFTAFDRKQFPFATMLS----IASNTLDWEMGRQIHAQTIVTTA 342
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ + N L+ MYAK G+ ++ +F + ++ + W M S + + L+LF +
Sbjct: 343 DSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNK 402
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
MR+ + A +L A +A+
Sbjct: 403 -----------------------------------MRQASVIADQATFASLLRASASIAS 427
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+GK +H F+IK GF VF +AL+ VY K G +K A F E+ ++NIVSWNA+I++
Sbjct: 428 LSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISA 487
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM-QLA 406
YA+ G + ++ F ++ L G +P+ +S+ V+ A + +G EE L F M Q+
Sbjct: 488 YAQNGEAEATLKSFKEM-VLSG---LQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIY 543
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
K+ + ++ + S N ++ + + ++ + ++ + +LN C +
Sbjct: 544 KLDPRREHYASVVDMLCRSGRFNEAEKL---MAEMPIDPDEIMWSSVLN---ACRIHKNQ 597
Query: 467 HL-------VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
L +F E +D + +M + Y G EN + M + G K
Sbjct: 598 ELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKK-------- 649
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRA 562
L A S + +E M R PQ+E +D+L +
Sbjct: 650 LPAYSWVEIKHETH----MFSANDRCHPQIEEIRKKIDMLTKT 688
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 33/209 (15%)
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
N +++ L S+ + LN+ I +V+ + + N + ++K G L + +F
Sbjct: 11 NLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLF 70
Query: 471 EQIEKKDLITWNSMISGYGMNG-LGE------------------------------NALA 499
E++ K+ ++ N MISGY +G LGE A
Sbjct: 71 EKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFE 130
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
F +M G +PD V FV +LS C+ + N+ ++ +++ + ++ +VD
Sbjct: 131 LFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIK-LGYDSRLIVGNTLVDSY 189
Query: 560 GRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
++ L A + K MP E +++ + +L
Sbjct: 190 CKSNRLDLACQLFKEMP-EIDSFTFAAVL 217
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 202/614 (32%), Positives = 309/614 (50%), Gaps = 87/614 (14%)
Query: 93 CKSSSL-----LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
CKS S+ WN+ LR + AL LY +M + G + FTFP +++C + S
Sbjct: 5 CKSKSMNALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAAL-S 63
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
G H + ++G + LI MY K + ++ K+F++ N+ S +
Sbjct: 64 LPI---LGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEE----NFHSRKL 116
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
V + +L+S + + E + LF M + G
Sbjct: 117 T-----------------------------VCYNALVSGYVSNSKCSEAVLLFRQMNEEG 147
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
+ V + + ++ C +G +H +K GF+ V V N I +Y K G V AQ
Sbjct: 148 VPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQ 207
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
LF E M +ISW+A++ +
Sbjct: 208 KLFDE---------------------------------------MPVKGLISWNAMVSGY 228
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
A NG L+L+R M + V + VT+ G+LS CA A ++G E+ + N
Sbjct: 229 AQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNP 288
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
+ N L+NMY +CG L + VF+ + ++ L++W ++I GYGM+G GE A+ F+EMI +
Sbjct: 289 FLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRS 348
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
G +PDG AFV VLSACSHAGL ++G F MM R +++EP EHY+CMVDLLGRAG L+E
Sbjct: 349 GIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKE 408
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A ++++MP++P+ VWG LL +C++HKN ++AE ++ L E G Y+LLSNIY+
Sbjct: 409 AQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSN 468
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG--NSLQSDLKNVCEVLEEL- 684
+ + ++RI K K LKK G S++E+K ++H F G N LQSD + VLEEL
Sbjct: 469 ANNSKGVLRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSD--EIYRVLEELE 526
Query: 685 ALQMENKGCVPDND 698
A+ M+ G P+ D
Sbjct: 527 AIIMQEFG-KPEKD 539
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 209/474 (44%), Gaps = 81/474 (17%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
Q H Q+ G F+ ++S+Y + + +AR VFE F + ++ +N+++ V
Sbjct: 70 QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEEN-FHSRKLTVCYNALVSGYV 128
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
SN A+ L+ +M + GV + T +I AC G +H L+ GF
Sbjct: 129 SNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPAC----VSPINLELGSSLHCSTLKYGFD 184
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+V +VN I MY K G ++ + KLFD++ VK ISWN M SG+A N LEL++ M
Sbjct: 185 SDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNM 244
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
++ G+ P+ VT +LSS CA+L A
Sbjct: 245 DMNGVHPDPVTLVGVLSS-----------------------------------CANLGAQ 269
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+G + + GF F+ NALI +Y + G++ AQ +F + E+ +VSW A+I Y
Sbjct: 270 SVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGY 329
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
G + AV++F ++ + S P+ ++ V+ A + G ++ L+ F+ M+
Sbjct: 330 GMHGHGEIAVQLFKEMIR----SGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMK---- 381
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+ L G E + +V ++ + G L+E
Sbjct: 382 ---------------RNYQLEPGPEHYSCMV---------------DLLGRAGRLKEAQT 411
Query: 469 VFEQIE-KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
+ E + K D W +++ ++ E A FE +IE +P+ + + +LS
Sbjct: 412 LIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE--LEPENIGYYVLLS 463
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 289/549 (52%), Gaps = 59/549 (10%)
Query: 173 IVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG 232
++N+L+ +Y++ G + K+FD++
Sbjct: 37 VINKLLRLYSRFGATDYAHKVFDEIT---------------------------------- 62
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
+PN WTSL+ + + +E LF MR+ I V I+ VL A L G+
Sbjct: 63 -QPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQ 121
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
++GF E + N +I YG + V +A+ F + E+N+VSW ++I Y +AG
Sbjct: 122 AVYGFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAG 181
Query: 353 LCDEAVEVFSQLEKLDGGS------------------------MERPNVISWSAVIGAFA 388
EA +F + D S M N+++WS +IG +A
Sbjct: 182 DMAEAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMKNLVTWSTMIGGYA 241
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
NG+ +AL+LF + + + + I G++S C++ ++ I + V S+ ++
Sbjct: 242 RNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLR 301
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
V L++MY KCG +E+ +FE KDL+ +++MI+ +GLG +A+ F++M A
Sbjct: 302 VFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRAN 361
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
KPD V F+ VL+AC+H GLV+EGR+ F M EF I+P +HYAC+VDLLGR G L+EA
Sbjct: 362 IKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEA 421
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
++++NMP+ P++ VWG LL +CR+H N +AE A+++F + + +G+Y+LLSNIYAA+
Sbjct: 422 YNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAA 481
Query: 629 GRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
GRW AKVR + ++K G SWIE+ +H F G+ +D ++ +L L M
Sbjct: 482 GRWGSVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSHTDSDSISLILYLLCEDM 541
Query: 689 ENKGCVPDN 697
+ G + D+
Sbjct: 542 KLSGYLIDS 550
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 199/398 (50%), Gaps = 42/398 (10%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASA-FLAARVLSIYARFGRLFDARNVFETAPFDCK 94
H++ CKT+ LK +H +L++ + AS+ F+ ++L +Y+RFG A VF+ +
Sbjct: 7 HIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEI---TQ 63
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR----- 149
++ LW S++ V N Y+ A L+++MR+ + FT V++A + F+
Sbjct: 64 PNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAV 123
Query: 150 FRFSFGQIVHNHVLQMGF----------------------QGNVHIVNELIGMYAKMGQM 187
+ F+F ++ ++ + NV +I Y K G M
Sbjct: 124 YGFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDM 183
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFD-CDGALELFKRMELEGLEPNFVTWTSLLSS 246
+++ LFD + VK+ SWN+M SG+ D +GA LF +M ++ N VTW++++
Sbjct: 184 AEAQVLFDSMPVKDLASWNVMVSGYMDIGDYTNGARCLFDQMPMK----NLVTWSTMIGG 239
Query: 247 HARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA-ADHMGKVIHGFVIKGGFED 305
+AR G+ + ++LF+ +++ I+ I ++S C+ L D +IH +V D
Sbjct: 240 YARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSD 299
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
+ V +LI +Y K G ++ A +F K+++ ++ +I + A GL +A+ +F +++
Sbjct: 300 -LRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQ 358
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+ + +P+ +++ V+ A G +E F++M
Sbjct: 359 RAN----IKPDSVTFLGVLTACNHGGLVDEGRKYFKQM 392
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 212/669 (31%), Positives = 350/669 (52%), Gaps = 53/669 (7%)
Query: 54 LIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLY 113
L TG N S F +R+ +R G++ +AR F++ F S WNSI+ SNGL
Sbjct: 13 LTSTGVNCS-FEISRL----SRIGKINEARKFFDSLQFKAIGS---WNSIVSGYFSNGLP 64
Query: 114 ENALKLYVKMRKLGVLG-DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVH 172
+ A +L+ +M + V+ +G G + R + +V ++ + NV
Sbjct: 65 KEARQLFDEMSERNVVSWNGLV----------SGYIKNRMI---VEARNVFELMPERNVV 111
Query: 173 IVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG 232
++ Y + G + ++ LF ++ +N +SW +MF G + D A +L+ M ++
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK- 170
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
+ V T+++ R GR++E +FD MR+R + I A + +
Sbjct: 171 ---DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFE 227
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
V+ E +++ Y G ++ A+ F + K +++ NA+I + E G
Sbjct: 228 VMP--------EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVG 279
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+A VF +E D + W +I A+ G EALDLF +MQ V +
Sbjct: 280 EISKARRVFDLMEDRDNAT--------WRGMIKAYERKGFELEALDLFAQMQKQGVRPSF 331
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
++ +LSVCA A+L GR++H H+VR + ++ V + L+ MY+KCG L + LVF++
Sbjct: 332 PSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR 391
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
KD+I WNS+ISGY +GLGE AL F EM +G P+ V +A+L+ACS+AG + EG
Sbjct: 392 FSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEG 451
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
IF+ M +F + P +EHY+C VD+LGRAG + +A +++++M ++P+A VWG LL +C+
Sbjct: 452 LEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACK 511
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
H D+AE A ++F + G+Y+LLS+I A+ +W D A VR + +T + K G
Sbjct: 512 THSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGC 571
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCE------VLEELALQMENKGCVPDNDIILWEMMG 706
SWIEV +K+HMF+ G +KN E +LE+ + G PD +L ++
Sbjct: 572 SWIEVGKKVHMFTRGG-----IKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDE 626
Query: 707 KKNVKRIQR 715
++ V + R
Sbjct: 627 EEKVDSLSR 635
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C T+ L +QVH L+ + ++A+ ++++Y + G L A+ VF+ F
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR--FSS 394
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K ++WNSI+ S+GL E ALK++ +M G + + T ++ AC + G
Sbjct: 395 K-DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGL- 452
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
+I + + V + + M + GQ+ + +L + + +K
Sbjct: 453 --EIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIK 497
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 196/683 (28%), Positives = 353/683 (51%), Gaps = 87/683 (12%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+LQ C + QL +++H L+ +G+ + A +L +Y + GR+ A VF
Sbjct: 272 VLQVCTELAQLNLGRELHAALLKSGSEVNIQCNA-LLVMYTKCGRVDSALRVFREID--- 327
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + WNS+L V NGLY A++ +M + G D ++ +G + +
Sbjct: 328 EKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPD---HACIVSLSSAVGHLGWLLN 384
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ VH + ++ + + N L+ MY K + S +FD++R+K++IS
Sbjct: 385 -GKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHIS--------- 434
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
WT++++ +A+ R E +++F +K GI+V
Sbjct: 435 --------------------------WTTIITCYAQSSRHIEALEIFREAQKEGIKVDPM 468
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
I +L C+ L + K +H + I+ G D V VKN +I +YG+ G+V + +F
Sbjct: 469 MIGSILEACSGLETILLAKQLHCYAIRNGLLDLV-VKNRIIDIYGECGEVYHSLKMFE-- 525
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
++E+ ++++W+++I +A++G
Sbjct: 526 -------------------------------------TVEQKDIVTWTSMINCYANSGLL 548
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
EAL LF +MQ V +SV + +L ++L G+E+HG ++R + + + + L
Sbjct: 549 NEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSL 608
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY CG L VF ++ KD++ W +MI+ GM+G G+ A+ F+ M++ G PD
Sbjct: 609 VDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDH 668
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
V+F+A+L ACSH+ LVNEG+ DMM+ +R+EP EHYAC+VDLLGR+G +EA + +K
Sbjct: 669 VSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIK 728
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
+MP++P + VW +LL +CR+HKN ++A A+++ L + G+Y+L+SN++A G+W +
Sbjct: 729 SMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNN 788
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK-G 692
A +VR +GL+K SWIE+ +H F++ ++ D + + L E+ ++ + G
Sbjct: 789 AKEVRARISERGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGG 848
Query: 693 CVPDNDIILWEMMGKKNVKRIQR 715
D +L ++ ++ V + R
Sbjct: 849 YTEDTRSVLHDVSEEEKVDVLHR 871
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 158/623 (25%), Positives = 284/623 (45%), Gaps = 118/623 (18%)
Query: 42 KTIHQLKQVHNQLIVTGA--NASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
K + Q QVH + TG+ FLA ++L +Y + GR+ DAR +F+ +
Sbjct: 72 KAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMS---SRTVFS 128
Query: 100 WNSILRVNVSNGLYENALKLYVKMR---KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
WN+++ +S+G AL +Y MR GV DG T V++A G R G
Sbjct: 129 WNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRC----GC 184
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
VH ++ G + + N LI MYAK G + + ++F+ +M G
Sbjct: 185 EVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFE-----------LMHDG----- 228
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
+ +W S++S + G + +DLF M++ + + +
Sbjct: 229 ------------------RDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTV 270
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
VL VC +LA ++G+ +H ++K G E + NAL+ +Y K G V A +F EI+EK
Sbjct: 271 GVLQVCTELAQLNLGRELHAALLKSGSEVNIQC-NALLVMYTKCGRVDSALRVFREIDEK 329
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG-SMERPNVISWSAVIG---------- 385
+ +SWN++++ Y + GL EA+E S++ L GG + ++S S+ +G
Sbjct: 330 DYISWNSMLSCYVQNGLYAEAIEFISEM--LRGGFQPDHACIVSLSSAVGHLGWLLNGKE 387
Query: 386 --AFASNGR-------GEEALDLFRKMQLAKVVA---------NSVTISGLLSVCAESA- 426
A+A R G +D++ K + + A + ++ + +++ A+S+
Sbjct: 388 VHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSR 447
Query: 427 ---ALNIGRE-------------------------------IHGHVVRVSMNKNILVQNG 452
AL I RE +H + +R + +++V+N
Sbjct: 448 HIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNR 506
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
++++Y +CG + +FE +E+KD++TW SMI+ Y +GL AL F EM +PD
Sbjct: 507 IIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPD 566
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHYACMVDLLGRAGLLQEASDI 571
VA V++L A + +G+ + ++R F +E + + +VD+ G L A +
Sbjct: 567 SVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAI--VSSLVDMYSGCGSLSGALKV 624
Query: 572 VKNMPMEPNAYVWGTLLNSCRMH 594
+ + + +W ++N+ MH
Sbjct: 625 FNAVKCK-DMVLWTAMINATGMH 646
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 328 bits (841), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 208/656 (31%), Positives = 334/656 (50%), Gaps = 77/656 (11%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F L ++L ++H I T + SA A+R+ D NVF
Sbjct: 16 FSFRLHPLTNPNKLPRIHGNTIATVEDPSA--ASRL-----------DCANVF------- 55
Query: 94 KSSSLLWNSILRVNVSNGLY--ENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR 151
+WN+++R V NGL + L Y++ + G+ +G TF +++A +
Sbjct: 56 -----VWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKE- 109
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
G+ VH V++ GF + + L+G Y G + ++FD++R
Sbjct: 110 ---GEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMR------------- 153
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+P V WT ++ ++ E+ ++LF MR+ G+
Sbjct: 154 ----------------------QPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPD 191
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
A++ V+S C L + K +H F+ K G E FV + LI YG+ G + A F
Sbjct: 192 MVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQ 251
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
E KNIV WN +I E + ++F SM +V+SW+++IG FA G
Sbjct: 252 ETPMKNIVVWNTMIHQSVEHNNLELGKQLFQ--------SMPDRDVVSWNSMIGGFARIG 303
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
+ +EAL F +M+ + V N++T+ LS CA AL+ G IH +V + MN++ + +
Sbjct: 304 QYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDS 363
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++MY KCG +++ +FE+ ++DL TW S++ G M+G GE AL F +M EA +P
Sbjct: 364 SLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQP 423
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D V V VLSAC+HAGL+++G F M + F + P++EHY MVDLLGR G L+EA D+
Sbjct: 424 DDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVDLLGRMGCLKEAYDL 483
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
+ MPME N +WG L++CR+H N ++ E A ++ GL + ++LSN+YA +W
Sbjct: 484 IMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLXPRDPWARVMLSNMYAEEAKW 543
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ---SDLKNVCEVLEEL 684
+ + +R K KGLKK G S IEV +H F G++ +++ ++ E +E+L
Sbjct: 544 DRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNSHPCYTEINSMVEKIEKL 599
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 328 bits (841), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 219/832 (26%), Positives = 368/832 (44%), Gaps = 154/832 (18%)
Query: 14 PSNPSRPFSII----TYNNSL----LDCFDHLLQQCK----TIHQLKQVHNQLIVTGANA 61
P NP + S++ +++ +L L C LQ C+ + ++H +V G A
Sbjct: 20 PDNPEKILSLVAAKASHHRALGSADLTC---ALQACRGRGNRWPLVLEIHATSVVRGLGA 76
Query: 62 SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYV 121
+ ++ +YA+ G ++ AR VF+ + W ++L GL + A +LY
Sbjct: 77 DRLIGNLLIDLYAKNGLVWQARQVFKELS---SRDHVSWVAMLSGYAQRGLGKEAFRLYS 133
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
+M V+ + V+ AC G F+ G+++H V + F + N LI +Y
Sbjct: 134 QMHWTAVIPTPYVLSSVLSACT-KGKL---FAQGRMIHAQVYKQAFCSETFVGNALIALY 189
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
G + ++F + + +++N + SG A + AL++F M+L GL P+ VT
Sbjct: 190 LGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVA 249
Query: 242 SLLSS-----------------------------------HARCGRLEETMDLFDM---- 262
SLL++ + +CG +E D+F++
Sbjct: 250 SLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRT 309
Query: 263 ---------------------------MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
M+ GI +L C +G+ IH
Sbjct: 310 NVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIH 369
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
IK GFE ++V LI +Y K+ + A+ + +E++++VSW ++I Y + C+
Sbjct: 370 SLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCE 429
Query: 356 EAVEVFSQLEKLDGG---------------------------------SMERPNVISWSA 382
EA+ F +++ D G S ++ W+
Sbjct: 430 EALATFKEMQ--DCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNT 487
Query: 383 VIGAFASNGRGEEALDLFR-------------------------------KMQLAKVVAN 411
++ +A GR EEA LFR KM A N
Sbjct: 488 LVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYN 547
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
T +S A A + G+++HG V+ V N L+++Y KCG +E+ ++F
Sbjct: 548 VFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFS 607
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
++ ++ ++WN++I+ +G G AL F++M + G KP+ V F+ VL+ACSH GLV E
Sbjct: 608 EMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEE 667
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
G F M + + P +HYAC+VD+LGRAG L A V MP+ NA +W TLL++C
Sbjct: 668 GLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSAC 727
Query: 592 RMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
++HKN ++ E A + L + SY+LLSN YA +G+W + +VR K +G++K G
Sbjct: 728 KVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPG 787
Query: 652 QSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWE 703
+SWIEVK +H F G+ L + + L EL ++ G +N + E
Sbjct: 788 RSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHE 839
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 328 bits (841), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 197/732 (26%), Positives = 354/732 (48%), Gaps = 111/732 (15%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
LL+ C + + Q+H+Q + G +F+ ++ +YAR+ + A +F+ P +
Sbjct: 145 LLETCCSKLSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETP---HRT 201
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG-----DGFTFPLVIRACKFMGSFRFR 151
LWN++LR G + L L+ +M + + D ++ + +++C + +
Sbjct: 202 VYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLR----K 257
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
G+++H + ++ G++ + + LI +Y K GQM+D+ K+F
Sbjct: 258 LLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVF----------------- 300
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEV 270
+E +P+ V WTS++S + + G E + F M+ +
Sbjct: 301 ------------------MEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSP 342
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ--- 327
+ V S CA L+ +G+ +HGFV + G ++ + + N+L+ +YGK G +K A
Sbjct: 343 DPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLF 402
Query: 328 ----------------------------NLFSEIEEKNI-VSWNALIT------------ 346
+LF+E+ +K I +W +++
Sbjct: 403 REMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLE 462
Query: 347 -----------------SYAEAGLCDEAVEVFSQLEKLD-GGSMERPNVISWSAVIGAFA 388
+ L D ++ FS + +D M + +VI+W+ + +A
Sbjct: 463 EGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYA 522
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
NG E++ +FR M + +++ + +L+ +E L +H V++ N
Sbjct: 523 DNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQF 582
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI-EA 507
+ L+ +Y KC +E+ + VF+ + KD++TW+S+I+ YG +G GE AL F +M +
Sbjct: 583 IGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHS 642
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
KP+ V F+++LSACSH+GL+ EG +FD+MV +++++P EHYA MVDLLGR G L
Sbjct: 643 DTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDM 702
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A D++ NMPM+ +WG LL +CR+H+N + E A +F L G Y+LLSNIY+
Sbjct: 703 ALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSV 762
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
W A K+R K K L K+ GQS +E+K ++ F +G+ + + ++ E+L +L +
Sbjct: 763 DENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAK 822
Query: 688 MENKGCVPDNDI 699
M P I
Sbjct: 823 MREVAFDPQVQI 834
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 328 bits (841), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 198/704 (28%), Positives = 347/704 (49%), Gaps = 93/704 (13%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+L+ Y+ G + A +F+ P + WN+++ G+++ ++ L+V+M + GV
Sbjct: 89 MLTAYSHAGDISTAVALFDGMP---DPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGV 145
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D TF +++++C + S G VH ++ G + +V + L+ MY K +
Sbjct: 146 SPDRTTFAVLLKSCSALE----ELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL---EPNF-------- 237
D+ F + +N++SW +G N LELF M+ GL +P++
Sbjct: 202 DALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 238 ------------------------VTWTSLLSSHARCGRLEETMDLFD------------ 261
V T+++ +A+ L + F
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321
Query: 262 -----MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
M + I +++ V S CA+ G+ +H IK +++ +
Sbjct: 322 MMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIK-----------SVLDL 370
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG------- 369
YGK + A +F +++K+ VSWNA+I + + G D+ + F+++ + D
Sbjct: 371 YGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVV 430
Query: 370 ------GSMERPN----------VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
G ++ V+SW+A++ F+ N E A F +M + +
Sbjct: 431 DMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHF 490
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
T + +L CA A + +G++IHG +++ M + + + L++MY KCG + + LVFE++
Sbjct: 491 TFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKV 550
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
EK+D ++WN+MI GY ++GLG AL FE M + P+ FVAVL ACSH GL ++G
Sbjct: 551 EKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGC 610
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRM 593
R F +M +++EPQ+EH+ACMVD+LGR+ QEA + +MP + +A +W TLL+ C++
Sbjct: 611 RYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKI 670
Query: 594 HKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
++ ++AE AS + L + + Y+LLSN+YA SG+W D ++ R K LKK G S
Sbjct: 671 RQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCS 730
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
WIE + ++H F G+ + E+L +L +M+ G PD+
Sbjct: 731 WIEAQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDS 774
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 128/529 (24%), Positives = 234/529 (44%), Gaps = 92/529 (17%)
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
GF + N L+ MYA+ + + ++FD + ++ +SWN M + ++ D A+ LF
Sbjct: 47 GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
M +P+ V+W +L+S + + G +E++DLF M +RG+ AV+L C+ L
Sbjct: 107 DGMP----DPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 162
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+G +H +K G E V +AL+ +YGK + A F + E+N VSW + I
Sbjct: 163 EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGSAI 222
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA--SNGRGEEALDLFRKM 403
+ +E+F ++++L G + +P+ S A + + GR A + K
Sbjct: 223 AGCVQNEQYVRGLELFIEMQRL-GLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKF 281
Query: 404 QLAKVV----------ANSVT-------------------------------------IS 416
+VV ANS+T +S
Sbjct: 282 SSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLFMIRSSIRFDVVSLS 341
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
G+ S CAE+ G+++H L +L++Y KC L E +L+F+ +++K
Sbjct: 342 GVFSACAETKGYFPGQQVH-----------CLAIKSVLDLYGKCKALMEAYLIFQGMKQK 390
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA--VLSACSHAGLVNEGRR 534
D ++WN++I+ NG ++ + F EM+ AFVA V+ G+++E ++
Sbjct: 391 DSVSWNAIIAALEQNGHYDDTILHFNEMLRFD------AFVASTVVDMYCKCGIIDEAQK 444
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK------NMPMEPNAYVWGTLL 588
+ D RI Q +L L +E+ K +M ++P+ + + T+L
Sbjct: 445 LHD------RIGGQ--QVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVL 496
Query: 589 NSCRMHKNTDVAEAMASQIFG---LITETTGSYMLLSNIYAASGRWEDA 634
++C ++ + + QI L E S ++ ++YA G D+
Sbjct: 497 DTCANLATIELGKQIHGQIIKQEMLDDEYISSTLV--DMYAKCGDMPDS 543
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 134/279 (48%), Gaps = 9/279 (3%)
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
++ GF FV N L+ +Y + A+ +F + ++ VSWN ++T+Y+ AG A
Sbjct: 43 MVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 102
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
V +F DG M P+V+SW+A++ + G +E++DLF +M V + T +
Sbjct: 103 VALF------DG--MPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAV 154
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
LL C+ L++G ++H V+ + ++ + L++MY KC L++ F + +++
Sbjct: 155 LLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERN 214
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
++W S I+G N L F EM G ++ + +C+ +N GR++
Sbjct: 215 WVSWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHA 274
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
++ + +VD+ +A L +A +P
Sbjct: 275 HAIKN-KFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 106/201 (52%), Gaps = 7/201 (3%)
Query: 63 AFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVK 122
AF+A+ V+ +Y + G + +A+ + + + WN+IL N E A K + +
Sbjct: 423 AFVASTVVDMYCKCGIIDEAQKLHDRIG---GQQVVSWNAILSGFSLNKESEAAQKFFSE 479
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M +G+ D FTF V+ C + + G+ +H +++ + +I + L+ MYA
Sbjct: 480 MLDMGLKPDHFTFATVLDTCANLATIEL----GKQIHGQIIKQEMLDDEYISSTLVDMYA 535
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K G M DS +F+KV ++++SWN M G+AL+ AL +F+RM+ E + PN T+ +
Sbjct: 536 KCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVA 595
Query: 243 LLSSHARCGRLEETMDLFDMM 263
+L + + G ++ F +M
Sbjct: 596 VLRACSHVGLFDDGCRYFHLM 616
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 116/553 (20%), Positives = 210/553 (37%), Gaps = 123/553 (22%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+Q+H I ++ + ++ +YA+ L DAR F P +S
Sbjct: 270 RQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS---------- 319
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC-KFMGSFRFRFSFGQIVHNHVLQMG 166
NA+ + + M + + D + V AC + G F GQ VH
Sbjct: 320 -------NAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFP-----GQQVH------- 360
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+ ++ +Y K + +++ +F ++ K+ +SWN + + N D + F
Sbjct: 361 ----CLAIKSVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 416
Query: 227 RM----------------------ELEGLEPNF-----VTWTSLLSSHARCGRLEETMDL 259
M E + L V+W ++LS + E
Sbjct: 417 EMLRFDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKF 476
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
F M G++ A VL CA+LA +GK IHG +IK D ++ + L+ +Y K
Sbjct: 477 FSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAK 536
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK------------- 366
GD+ + +F ++E+++ VSWNA+I YA GL EA+ +F +++K
Sbjct: 537 CGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAV 596
Query: 367 ---------LDGGSME----------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
D G P + ++ ++ + +EA+ M
Sbjct: 597 LRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQ- 655
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG------ 461
A++V LLS+C + I +V+ + + + V L N+Y + G
Sbjct: 656 --ADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSS-VYILLSNVYAESGKWADVS 712
Query: 462 ----CLEEGHLVFEQIEKKDLITW---NSMISGYGMNGLGENALATFEEMIE-------- 506
L++G L +K+ +W S + G+ + EM+
Sbjct: 713 RTRRLLKQGRL-----KKEPGCSWIEAQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKL 767
Query: 507 AGFKPDGVAFVAV 519
+G++PD +FV V
Sbjct: 768 SGYEPDSASFVEV 780
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 34 FDHLLQQCK---TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L C TI KQ+H Q+I ++++ ++ +YA+ G + D+ VFE
Sbjct: 492 FATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVE 551
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
K + WN+++ +GL AL+++ +M+K V+ + TF V+RAC +G F
Sbjct: 552 ---KRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLF 606
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 328 bits (841), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 194/642 (30%), Positives = 334/642 (52%), Gaps = 85/642 (13%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
LA ++ Y G + +AR++F+ P + + W +++ S+ A + + +M
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMP---ERDVVAWTAMITGYASSNYNSCAWECFHEMF 103
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
K G + FT V+++C+ M ++G +VH V+++G +G++++ N L+ MYA
Sbjct: 104 KQGRSPNEFTLSSVLKSCRNMKVL----AYGALVHGVVVKLGMEGSLYVDNALMNMYATC 159
Query: 185 G-QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
M +F +F ++VKN VTWT+L
Sbjct: 160 SVTMEAAFLIFRDIKVKND-----------------------------------VTWTTL 184
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
++ G + ++ M +V I + + A + + GK IH V+K GF
Sbjct: 185 ITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASIDSVTTGKQIHASVVKRGF 244
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
+ + V N+++ Y + G + A+ F E+E+K++++WN LI S+
Sbjct: 245 QSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLI----------------SE 288
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
LE+ D EAL +F++ + V N T + L++ CA
Sbjct: 289 LERSDSS------------------------EALLMFQRFESQGFVPNCYTFTSLVAACA 324
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE-KKDLITWN 482
AALN G+++HG + R NKN+ + N L++MY KCG + + VF +IE +++L++W
Sbjct: 325 NIAALNCGQQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWT 384
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
SM+ GYG +G G A+ F++M+ +G +PD + F+AVLSAC HAGLV +G + F++M E
Sbjct: 385 SMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESE 444
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD-VAE 601
+ I P + Y C+VDLLGRAG + EA ++V+ MP +P+ WG +L +C+ HK+T ++
Sbjct: 445 YGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHTGLISR 504
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI 661
A ++ L G+Y++LS IYAA G+W + A+VR + G KK AG SWIEV+ ++
Sbjct: 505 LAAKKVMELKPRMVGTYVMLSYIYAAEGKWVEFARVRKMMRMMGNKKEAGMSWIEVENQV 564
Query: 662 HMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWE 703
F+ + + + +V VL L + + G VPD D ++++
Sbjct: 565 FSFAVSDKMCPNASSVYSVLGLLIEETKEAGYVPDLDSLVYD 606
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 187/402 (46%), Gaps = 73/402 (18%)
Query: 26 YNNSLLDCFDHLLQQ---------------CKTIHQLKQ---VHNQLIVTGANASAFLAA 67
YN+ +CF + +Q C+ + L VH ++ G S ++
Sbjct: 91 YNSCAWECFHEMFKQGRSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDN 150
Query: 68 RVLSIYARFGRLFDARN-VFETAPFDCK-SSSLLWNSILR--VNVSNGLYENALKLYVKM 123
++++YA +A +F D K + + W +++ ++ +G+ LK+Y +M
Sbjct: 151 ALMNMYATCSVTMEAAFLIFR----DIKVKNDVTWTTLITGFTHLGDGI--GGLKMYKQM 204
Query: 124 RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
+ + +RA + S + G+ +H V++ GFQ N+ ++N ++ Y +
Sbjct: 205 LLENADVTPYCITIAVRASASIDSV----TTGKQIHASVVKRGFQSNLPVMNSILDFYCR 260
Query: 184 MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
G +S++ + F ++ K+ I+WN + S + D AL +F+R E +G PN T+TSL
Sbjct: 261 CGYLSEAKRYFHEMEDKDLITWNTLISELERS-DSSEALLMFQRFESQGFVPNCYTFTSL 319
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
+++ CA++AA + G+ +HG + + GF
Sbjct: 320 VAA-----------------------------------CANIAALNCGQQLHGRIYRRGF 344
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEE-KNIVSWNALITSYAEAGLCDEAVEVFS 362
V + NALI +Y K GD+ ++ +F EIEE +N+VSW +++ Y G EAVE+F
Sbjct: 345 NKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
++ S RP+ I + AV+ A G E+ L F M+
Sbjct: 405 KMV----SSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVME 442
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 201/687 (29%), Positives = 350/687 (50%), Gaps = 103/687 (14%)
Query: 19 RPFSIITYNNSLLD---CFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYAR 75
R FS+ ++ L F +L+ C+T+ ++H + G ++AA ++ +Y+R
Sbjct: 71 RCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSR 130
Query: 76 FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
+ + +AR +F+ P S WN+++ +G + AL L +R + D T
Sbjct: 131 YKAVGNARILFDEMPVRDMGS---WNAMISGYCQSGNAKEALTLSNGLRAM----DSVTV 183
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
++ AC G F + G +H++ ++ G + + + D K+FD
Sbjct: 184 VSLLSACTEAGDF----NRGVTIHSYSIKHGLESEL---------------LRDCQKVFD 224
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ V++ ISWN + + LN A+ LF+ M L ++P+ +T SL
Sbjct: 225 RMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL------------ 272
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
A +LS D+ A + + GF ++ G+ F+++ I
Sbjct: 273 --------------------ASILSQLGDIRA---CRSVQGFTLRKGW----FLEDITIG 305
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
NA++ YA+ GL D A VF+ L D
Sbjct: 306 --------------------------NAVVVMYAKLGLVDSARAVFNWLPNTD------- 332
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQL-AKVVANSVTISGLLSVCAESAALNIGREI 434
VISW+ +I +A NG EA++++ M+ ++ AN T +L C+++ AL G ++
Sbjct: 333 -VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 391
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
HG +++ + ++ V L +MY KCG LE+ +F QI + + + WN++I+ +G +G G
Sbjct: 392 HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHG 451
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
E A+ F+EM++ G KPD + FV +LSACSH+GLV+EG+ F+MM ++ I P ++HY C
Sbjct: 452 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC 511
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
MVD+ GRAG L+ A +K+M ++P+A +WG LL++CR+H N D+ + + +F + E
Sbjct: 512 MVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEH 571
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
G ++LLSN+YA++G+WE ++R A KGL+K G S +EV K+ +F +GN
Sbjct: 572 VGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMY 631
Query: 675 KNVCEVLEELALQMENKGCVPDNDIIL 701
+ + L L +++ G VPD+ +L
Sbjct: 632 EEMYRELTALQAKLKMIGYVPDHRFVL 658
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 200/453 (44%), Gaps = 86/453 (18%)
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL-EGLEPNFVTWTSLLSSHARCGR 252
FD ++ ++ +WN+M SG+ + + F L GL P++ T+ S+L
Sbjct: 42 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVL-------- 93
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
+A V+ G IH +K GF V+V +
Sbjct: 94 --------------------KACRTVID----------GNKIHCLALKFGFMWDVYVAAS 123
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD---- 368
LI +Y ++ V A+ LF E+ +++ SWNA+I+ Y ++G EA+ + + L +D
Sbjct: 124 LIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTV 183
Query: 369 ---------GGSMER------------------------------PNVISWSAVIGAFAS 389
G R ++ISW+++I A+
Sbjct: 184 VSLLSACTEAGDFNRGVTIHSYSIKHGLESELLRDCQKVFDRMYVRDLISWNSIIKAYEL 243
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS-MNKNIL 448
N + A+ LF++M+L+++ + +T+ L S+ ++ + R + G +R ++I
Sbjct: 244 NEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDIT 303
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
+ N ++ MY K G ++ VF + D+I+WN++ISGY NG A+ + M E G
Sbjct: 304 IGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEG 363
Query: 509 -FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
+ +V+VL ACS AG + +G ++ +++ + + + D+ G+ G L++
Sbjct: 364 EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLED 422
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
A + +P N+ W TL+ H + + A
Sbjct: 423 ALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKA 454
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEE-MIEAGFKPDGVAFVAVLSAC 523
F+ I+ +D+ WN MISGYG G + F M+ +G PD F +VL AC
Sbjct: 41 TFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 96
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 205/634 (32%), Positives = 320/634 (50%), Gaps = 91/634 (14%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
IT+ ++LL C L K IH IV+ S F+ + ++++YAR G + AR
Sbjct: 248 ITFTSALLACTK--LVDGKAIHAR-------IVSSNMESDFVGSALINMYARCGDVSSAR 298
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK 143
FE + W S++ V Y AL LY +M GV DG T+ + AC
Sbjct: 299 QAFEKIQ---NKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACA 355
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
+G+ + G+ +H+ V + GFQ V + L+ MYAK G++ + +F++VR K
Sbjct: 356 SLGALKE----GKAIHSRVFECGFQSLV-VHTALLTMYAKCGELDAARAVFNRVRQKR-- 408
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
N WT+++S++A+ G +E ++L+D M
Sbjct: 409 --------------------------------NVYCWTAMISAYAQAGHTQEALELYDQM 436
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
G + VL+ C+ G IHG V
Sbjct: 437 VAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHV------------------------- 471
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
+N SE+ N+ NAL+T YA+ G + A F + R +++SW+A+
Sbjct: 472 ---EN--SELA-SNVAVQNALVTMYAKCGSLELAKSAFE--------ASGRKDLVSWNAM 517
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR-VS 442
IGA+A +G G EALDL++ M V+ + VTI+ LS CA S +L +GREIH V++ S
Sbjct: 518 IGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQS 577
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFE 502
+++VQ L+NMY +CG LE +FE + ++D+++W +M S Y G + L +
Sbjct: 578 FRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYL 637
Query: 503 EMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRA 562
EM+ G +P+ + F ++L CSHAGL+ G F M E + P EH+ CMVDLLGR+
Sbjct: 638 EMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRS 697
Query: 563 GLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLS 622
G L++A +V++MP +P++ W T+L SC+ H + D A+ A ++ L E T Y LLS
Sbjct: 698 GRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLS 757
Query: 623 NIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
+I+ A+G ++A +V++S K GLKK GQS IE
Sbjct: 758 SIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIE 791
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 174/613 (28%), Positives = 286/613 (46%), Gaps = 114/613 (18%)
Query: 31 LDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
++ +D LLQQC + L K VH L+ TG + FL ++ +Y G + AR F+
Sbjct: 42 VELYDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQ 101
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
F + +N +L NGL+ AL+LY +M + G D T+ +V+ +C +GS
Sbjct: 102 N--FASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGS 159
Query: 148 FRFRFSFGQIVHNHVLQMG--FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
R + +H +++ + N+ + N L+ MY K G + ++ K+FD ++ ++ +SW
Sbjct: 160 LRE----AREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSW 215
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS----------------------- 242
M S +A N CD AL+L+++M+ +G++P+ +T+TS
Sbjct: 216 TSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVDGKAIHARIVSSNM 275
Query: 243 --------LLSSHARCGRL-------------------------------EETMDLFDMM 263
L++ +ARCG + E +DL+ M
Sbjct: 276 ESDFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRM 335
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
G+ L CA L A GK IH V + GF+ V V AL+ +Y K G++
Sbjct: 336 DHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQSLV-VHTALLTMYAKCGEL 394
Query: 324 KVAQNLFSEIEEK-NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
A+ +F+ + +K N+ W A+I++YA+AG EA+E++ Q+ + G+ RPN ++S
Sbjct: 395 DAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQM--VAEGT--RPNEYTFSN 450
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS 442
V+ A C+ S L G +IHGHV
Sbjct: 451 VLAA-----------------------------------CSSSGDLEAGMKIHGHVENSE 475
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFE 502
+ N+ VQN L+ MY KCG LE FE +KDL++WN+MI Y +GLG AL ++
Sbjct: 476 LASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQ 535
Query: 503 EMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRA 562
M G PD V + LSAC+ +G + GR I +++ + +V++ GR
Sbjct: 536 TMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRC 595
Query: 563 GLLQEASDIVKNM 575
G L+ A + ++M
Sbjct: 596 GRLETARSMFEDM 608
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 175/416 (42%), Gaps = 73/416 (17%)
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
+ + ++ D R +E+ E +L C L + GK++H +++ G F+ N
Sbjct: 27 VSDALEQLDQRRHGYVELYDE----LLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNL 82
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
LI +YG G++ +A+ F +N S A
Sbjct: 83 LIQMYGNCGEIHLARAAF-----QNFASIKA----------------------------- 108
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
V ++ ++ A+ NG AL+L+ +M + +T +L C+ +L R
Sbjct: 109 ----VACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAR 164
Query: 433 EIHGHVVRVS--MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
EIH ++ + N+ +QN L+NMY KCG +EE VF+ I+ +D ++W SMIS Y
Sbjct: 165 EIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYAN 224
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACS--------HAGLVNE-------GRRI 535
NG + AL +++M G +PD + F + L AC+ HA +V+ G +
Sbjct: 225 NGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVDGKAIHARIVSSNMESDFVGSAL 284
Query: 536 FDMMVREFRIEP--------QMEHYACMVDLLG---RAGLLQEASDIVKNMPME---PNA 581
+M R + Q +H C L+ + +EA D+ M E +
Sbjct: 285 INMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADG 344
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
+ T L +C +A+ S++F ++ + L +YA G + A V
Sbjct: 345 VTYVTALGACASLGALKEGKAIHSRVFECGFQSLVVHTALLTMYAKCGELDAARAV 400
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 194/644 (30%), Positives = 327/644 (50%), Gaps = 89/644 (13%)
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLY-ENALKLYVK 122
F+A+ + +Y R+ AR VF+T P ++LWN++L GL A++ + +
Sbjct: 150 FVASALAKLYFVLSRVDHARKVFDTVP---SPDTVLWNTLL-----AGLSGSEAVESFAR 201
Query: 123 MRKLG-VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
M G V D T V+ A + + G+ VH+ + G + H++ LI +Y
Sbjct: 202 MVCDGSVRPDATTLASVLPAAAEVAD----VTMGRCVHSFAEKCGLAEHEHVLTGLISLY 257
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
+K G + + LFD + + +++N + SG+++N ++ LF + GL PN T
Sbjct: 258 SKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLV 317
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
+L+ H+ G D + + +HGFV+K
Sbjct: 318 ALIPVHSPFGH-----------------------------------DLLAQCLHGFVLKS 342
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
GF V A+ ++ + D++ A+ F + EK + SWNA+I+ YA+ GL + AV +F
Sbjct: 343 GFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALF 402
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
Q+ KL+ RPN I TIS LS
Sbjct: 403 EQMVKLN----VRPNPI-----------------------------------TISSTLSA 423
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
CA+ AL++G+ +H + + N+ V L++MY KCG + E +F ++ K++++W
Sbjct: 424 CAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSW 483
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
N+MI+GYG++G G AL +++M++A P F++VL ACSH GLV EG ++F M
Sbjct: 484 NAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTD 543
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP-NAYVWGTLLNSCRMHKNTDVA 600
++ I P +EH CMVDLLGRAG L+EA +++ P VWG LL +C +HK++D+A
Sbjct: 544 DYAINPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLA 603
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
+ + ++F L E +G Y+LLSN++ + ++ +AA VR AK++ L K G + IE+ K
Sbjct: 604 KLASQKLFELDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNK 663
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
H+F +G+ + + LE+L +M G P+ + L+++
Sbjct: 664 PHVFMAGDRAHPQSEAIYSYLEKLTAKMIEAGYRPETEAALYDV 707
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 120/231 (51%), Gaps = 16/231 (6%)
Query: 34 FDH-LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
F H LL QC +H ++ +G A++ ++ + +++ R + AR F+T P
Sbjct: 326 FGHDLLAQC--------LHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEK 377
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
S WN+++ NGL E A+ L+ +M KL V + T + AC +G+
Sbjct: 378 TMES---WNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGA----L 430
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
S G+ +H + + + NV+++ LI MYAK G +S++ ++F+ + KN +SWN M +G+
Sbjct: 431 SLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGY 490
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
L+ AL+L+K M L P T+ S+L + + G +EE +F M
Sbjct: 491 GLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSM 541
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+H V + V + L +Y ++ VF+ + D + WN++++G
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLS---- 191
Query: 494 GENALATFEEMI-EAGFKPDGVAFVAVLSACSHAGLVNEGR 533
G A+ +F M+ + +PD +VL A + V GR
Sbjct: 192 GSEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGR 232
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 201/672 (29%), Positives = 336/672 (50%), Gaps = 94/672 (13%)
Query: 32 DCFDHLLQQCKTIHQLKQVHNQLIVTGA----NASAFLAARVLSIYARFGRLFDARNVFE 87
+C L +QC + L+QVH Q++V + N A L + LF
Sbjct: 25 ECLVFLAKQCSSTKTLQQVHTQMVVNSSIHTPNNHLLSKAIHLKNFPYSSLLFS-----H 79
Query: 88 TAPFDCKSSSLLWNSILR-VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
AP + +N ++R + + Y AL L+ +M L + D FTFP +C +
Sbjct: 80 IAP---HPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLA 136
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
S S H+ + ++ + H + LI YA+ G ++ + K+FD++ ++ +SWN
Sbjct: 137 SL----SHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWN 192
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRK 265
S+++ +A+ G E +++F +M R+
Sbjct: 193 -----------------------------------SMIAGYAKAGCAREAVEVFREMGRR 217
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
G E ++ +L C +L +G+ + GFV++ G ++ +ALI +Y
Sbjct: 218 DGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMY-------- 269
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A+ G + A +F DG M +VI+W+AVI
Sbjct: 270 -----------------------AKCGELESARRIF------DG--MAARDVITWNAVIS 298
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
+A NG +EA+ LF M+ V AN +T++ +LS CA AL++G++I + +
Sbjct: 299 GYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQH 358
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
+I V L++MY K G L+ VF+ + +K+ +WN+MIS +G + AL+ F+ M
Sbjct: 359 DIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMS 418
Query: 506 E--AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
+ G +P+ + FV +LSAC HAGLV+EG R+FDMM F + P++EHY+CMVDLL RAG
Sbjct: 419 DEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAG 478
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
L EA D+++ MP +P+ G LL +CR KN D+ E + I + +G+Y++ S
Sbjct: 479 HLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSK 538
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
IYA WED+A++R+ + KG+ K G SWIEV+ +H F +G+ L D ++ +++
Sbjct: 539 IYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDGLCLDSIDLSNIIDL 598
Query: 684 LALQMENKGCVP 695
L +++ +G VP
Sbjct: 599 LYEELKREGYVP 610
>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
Length = 663
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/474 (36%), Positives = 270/474 (56%), Gaps = 35/474 (7%)
Query: 232 GLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMG 291
GL P+ W +++S+ + + ++++ +RK EV VL C ++ +G
Sbjct: 120 GLSPS-AQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLG 178
Query: 292 KVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW----NALITS 347
K IHGFV+K G + VFV NAL+ +YG+ V+ A+ +F ++ E+++VSW AL+
Sbjct: 179 KEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDM 238
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
YA+ G A ++F+ L + V+SW+A+I + R EE LF +MQ
Sbjct: 239 YAKCGHLGLARQLFNGLTQ--------KTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEEN 290
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
+ N +T+ LN R + + ++ L++MY KCG +
Sbjct: 291 IFPNEITM------------LNKER----------VEVDCILNTALVDMYAKCGDINAAG 328
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
+F + +D+ WN++I+G+ M+G GE AL F EM G KP+ + F+ +L ACSHAG
Sbjct: 329 RLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAG 388
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
LV EG+++F+ MV F + PQ+EHY CMVDLLGRAGLL EA +++K+MP++PN VWG L
Sbjct: 389 LVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGAL 448
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
+ +CR+HKN + E A+Q+ + E G +L+SNIYAA+ RW DAA VR + KT G+K
Sbjct: 449 VAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMK 508
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
K G S IEV +H F G+ ++ + E+L E+ ++ G VPD +L
Sbjct: 509 KEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVL 562
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 175/461 (37%), Gaps = 110/461 (23%)
Query: 4 SLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASA 63
L H PH NP+ P + S D T+ Q KQ+H +I T
Sbjct: 60 QLQHHPHSTLKFNPT-PLQTPPTSPSQHDL--------STLEQTKQIHAHIIKT-----H 105
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM 123
F A + + N F + S S WN ++ NAL +Y ++
Sbjct: 106 FHHALQIPL-----------NDFPSG----LSPSAQWNFVITSYTKRNQPRNALNVYAQL 150
Query: 124 RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNEL------ 177
RK+ D F P V++AC G + G+ +H VL+ G +V + N L
Sbjct: 151 RKMDFEVDNFMAPSVLKAC---GQVSWT-QLGKEIHGFVLKKGLDRDVFVGNALMLMYGE 206
Query: 178 -----------------------------IGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
+ MYAK G + + +LF+ + K +SW M
Sbjct: 207 CACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAM 266
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+G + + +LF RM+ E + PN +T M+ K +
Sbjct: 267 IAGCIRSNRLEEGTKLFIRMQEENIFPNEIT----------------------MLNKERV 304
Query: 269 EVGA---EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
EV A+ + + C D+ A G + + + NA+I + HG +
Sbjct: 305 EVDCILNTALVDMYAKCGDINAA-------GRLFIEAISRDICMWNAIITGFAMHGYGEE 357
Query: 326 AQNLFSEIEEK----NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
A ++F+E+E + N +++ L+ + + AGL E ++F ++ G P + +
Sbjct: 358 ALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLV---PQIEHYG 414
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
++ G +EA ++ + M + N++ L++ C
Sbjct: 415 CMVDLLGRAGLLDEAHEMIKSM---PIKPNTIVWGALVAAC 452
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/453 (38%), Positives = 266/453 (58%), Gaps = 13/453 (2%)
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
A +F R+ PN W +++ ++A E + +F M + L
Sbjct: 61 AHSIFSRIP----NPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALK 116
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
C + G+ IHG V+K G D +F++N LI +Y G ++ A++L + E+++VS
Sbjct: 117 SCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVS 176
Query: 341 WNALITSYAEAGLCDEAVE-VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
WNAL+++YAE GL + A VF G NV+SW+A+I ++ GR E L L
Sbjct: 177 WNALLSAYAERGLMELASRRVF--------GETPVKNVVSWNAMITGYSHAGRFSEVLVL 228
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
F MQ A V ++ T+ +LS CA AL+ G +H ++ + ++ + V L++MY K
Sbjct: 229 FEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSK 288
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
CG +E+ VF +KD+ TWNS+ISG +G G++AL F EM+ GFKP+ V FV V
Sbjct: 289 CGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCV 348
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
LSACS AGL++EGR +F++MV I+P +EHY CMVDLLGR GLL+EA ++V+ MP +
Sbjct: 349 LSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKE 408
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRI 639
+ VW +LL +CR H N ++AE +A ++ L + + S++ LSN+YA+ GRW+D +VR
Sbjct: 409 ASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQ 468
Query: 640 SAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
+ +G++K G S IEV ++ F +G L S
Sbjct: 469 KMRAQGVRKDPGCSMIEVDGTVYEFLAGEGLVS 501
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/475 (25%), Positives = 228/475 (48%), Gaps = 58/475 (12%)
Query: 39 QQCKTIHQLKQVHNQLIVTGANASAFLAARVL---SIYARFGRLFDARNVFETAPFDCKS 95
+ +I +L Q H ++ +G S F A+R++ S + + A ++F P
Sbjct: 15 EMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIP---NP 71
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+S +WN+I+R ++ E AL ++ +M VL D +TF +++C GSF G
Sbjct: 72 NSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSC---GSFS-GVEEG 127
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ +H HVL+ G ++ I N LI +YA G + D+ L D++ ++ +SWN + S +A
Sbjct: 128 RQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAER 187
Query: 216 FDCDGALELFKRMELEGLEP--NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
G +EL R + G P N V+W ++++ ++ GR E + LF+ M+ G++
Sbjct: 188 ----GLMELASR-RVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNC 242
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ VLS CA + A G+ +H ++ K G FV AL+ +Y K G ++ A +F+
Sbjct: 243 TLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSC 302
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
K+I +WN++I+ + G A+++FS++ ++ F N
Sbjct: 303 LRKDISTWNSIISGLSTHGSGQHALQIFSEM------------------LVEGFKPN--- 341
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG- 452
VT +LS C+ + L+ GRE+ +V V + + G
Sbjct: 342 ------------------EVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGC 383
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDL-ITWNSMISGYGMNGLGENALATFEEMIE 506
++++ + G LEE + +++ +K+ + W S++ +G E A ++++E
Sbjct: 384 MVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLE 438
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 163/372 (43%), Gaps = 61/372 (16%)
Query: 34 FDHLLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L+ C + + + +Q+H ++ TG F+ ++ +YA G + DAR++ +
Sbjct: 111 FTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRM- 169
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENA--------------------------------LK 118
+ + WN++L GL E A L
Sbjct: 170 --LERDVVSWNALLSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLV 227
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
L+ M+ GV D T V+ AC +G+ S G+ VH ++ + G + + L+
Sbjct: 228 LFEDMQHAGVKPDNCTLVSVLSACAHVGAL----SQGEWVHAYIDKNGISIDGFVATALV 283
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
MY+K G + + ++F+ K+ +WN + SG + + AL++F M +EG +PN V
Sbjct: 284 DMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEV 343
Query: 239 TWTSLLSSHARCGRLEETMDLFDMM-RKRGIEVGAEAIAVVLSVCADLAADHMGKV---- 293
T+ +LS+ +R G L+E ++F++M GI+ E ++ D +G+V
Sbjct: 344 TFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMV--------DLLGRVGLLE 395
Query: 294 -IHGFVIKGGFEDYVFVKNALICVYGKHGDV----KVAQNLFSEIEEKNIVSWNALITSY 348
V K ++ V +L+ HG+V +VAQ L E+ + S+ L Y
Sbjct: 396 EAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLL-ELSPQESSSFVQLSNMY 454
Query: 349 AEAGLCDEAVEV 360
A G + +EV
Sbjct: 455 ASMGRWKDVMEV 466
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/229 (19%), Positives = 100/229 (43%), Gaps = 9/229 (3%)
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL---NMYMKCGCLEE 465
+++S +LS + +++ + H H+++ + + + L+ + +
Sbjct: 1 MSSSFPPPPILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPY 60
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
H +F +I + WN++I Y + E AL F +M+ A PD F L +C
Sbjct: 61 AHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGS 120
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
V EGR+I +++ + + ++ L G +++A ++ M +E + W
Sbjct: 121 FSGVEEGRQIHGHVLKT-GLGDDLFIQNTLIHLYASCGCIEDARHLLDRM-LERDVVSWN 178
Query: 586 TLLNSCRMHKNTDVAEAMASQIFG-LITETTGSYMLLSNIYAASGRWED 633
LL++ + + E + ++FG + S+ + Y+ +GR+ +
Sbjct: 179 ALLSA---YAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSE 224
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/404 (39%), Positives = 251/404 (62%), Gaps = 9/404 (2%)
Query: 290 MGKVIHGFVIKGG-FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+G +H +++ G V +L+ +Y V A+++F E+ +++V+WN +I Y
Sbjct: 96 LGPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAGY 155
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+AG A E+F +M NV+SW+ VIG +A R EEA+++FR+MQ+ +
Sbjct: 156 VKAGDLAHARELFD--------AMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGI 207
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+ V + +LS C + A+++G +H VVR + + I + N +++MYMKCGC+E+
Sbjct: 208 EPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVE 267
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
VFE +E+K ++TW ++I+G+ ++GLG A+ F M P+ V F+A+LSACSH GL
Sbjct: 268 VFEGMEEKSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGL 327
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ GR F++MV ++RI+PQ+EHY CMVDLLGRAG L+EA D+VK+MP++ NA +WG LL
Sbjct: 328 TDLGRWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALL 387
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
+ R H + D+ E + L +G+Y+LLSNI+A RW+D +K+R + K +GL+
Sbjct: 388 AASRTHGDADLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRN 447
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
V G S IEV +H F+S + L +CEVL E+ M++ G
Sbjct: 448 VPGASSIEVDGMVHEFTSRDGSHPFLHKICEVLCEINTNMKSVG 491
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 179/373 (47%), Gaps = 50/373 (13%)
Query: 139 IRACKFMGSFRFRFSF-GQIVHNHVLQMG-FQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
+RA + S R S G +H+ +L+ G + H+ L+ +Y ++D+ +F +
Sbjct: 80 LRAAARLPSHLLRRSLLGPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHE 139
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
+ V++ ++WN+M +G+ D A ELF M E N V+WT+++ +A+ R EE
Sbjct: 140 MAVRDVVAWNVMIAGYVKAGDLAHARELFDAMP----ERNVVSWTTVIGGYAQMRRPEEA 195
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
+++F M+ GIE A+ VLS C DL A +G+ +H FV++ G + + N++I +
Sbjct: 196 VEVFRRMQVEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDM 255
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
Y K G ++ A +F +EEK++V+W LI +A GL +AVE+F + MER N
Sbjct: 256 YMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQAVEMFRR--------MEREN 307
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
+ N VT +LS C+ ++GR
Sbjct: 308 -------------------------------MAPNDVTFLAILSACSHVGLTDLGRWYFN 336
Query: 437 HVVRVSMNKNILVQNG-LLNMYMKCGCLEEGH-LVFEQIEKKDLITWNSMISG---YGMN 491
+V K + G ++++ + GCL+E LV + K + W ++++ +G
Sbjct: 337 IMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTHGDA 396
Query: 492 GLGENALATFEEM 504
LGE AL E+
Sbjct: 397 DLGEEALVHLIEL 409
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 177/387 (45%), Gaps = 61/387 (15%)
Query: 41 CKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLW 100
C+ + + V +++ V A + A Y + G L AR +F+ P + + + W
Sbjct: 127 CRHVADARSVFHEMAVRDVVAWNVMIAG----YVKAGDLAHARELFDAMP---ERNVVSW 179
Query: 101 NSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
+++ E A++++ +M+ G+ DG V+ AC +G+ G+ VH
Sbjct: 180 TTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALLSVLSACGDLGAV----DLGEWVHR 235
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
V++ G + + ++N +I MY K G + + ++F+ + K+ ++W + +GFAL+
Sbjct: 236 FVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQ 295
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
A+E+F+RME E + PN VT+ ++LS+ + G
Sbjct: 296 AVEMFRRMERENMAPNDVTFLAILSACSHVG----------------------------- 326
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK-NIV 339
DL + ++ + IK E Y ++ + G+ G +K AQ+L ++ K N
Sbjct: 327 -LTDLGRWYFNIMVSQYRIKPQVEHY----GCMVDLLGRAGCLKEAQDLVKDMPLKANAA 381
Query: 340 SWNALIT---SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
W AL+ ++ +A L +EA+ +LE + G N I S + FA R ++
Sbjct: 382 IWGALLAASRTHGDADLGEEALVHLIELEPSNSG-----NYILLSNI---FAEQERWDDV 433
Query: 397 LDLFRKMQ---LAKVV-ANSVTISGLL 419
L + M+ L V A+S+ + G++
Sbjct: 434 SKLRKAMKERGLRNVPGASSIEVDGMV 460
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 194/616 (31%), Positives = 322/616 (52%), Gaps = 96/616 (15%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++++Y+R ++ +A VF P+ + + +N+I+ V+NGL + + Y +MR +GV
Sbjct: 16 LINMYSRCNQMEEAVLVFRD-PYH-ERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVGV 73
Query: 129 LGDGFTFPLVIRAC-KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
+ D FTFP V+RAC +FM + +H + +MG + NV + + L+ Y K+
Sbjct: 74 MPDKFTFPCVVRACCEFMEVRK--------IHGCLFKMGLELNVFVGSALVNTYLKVDGT 125
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
D+ K+F+++ E + V W ++++ +
Sbjct: 126 EDAEKVFEELP-----------------------------------ERDVVLWNAMINGY 150
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
+ G L + + +F M + GI + +LS+ + + G+ IHG V K G+ V
Sbjct: 151 TKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVTKMGYSSCV 210
Query: 308 FVKNALICVYG--KHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
V NALI +YG KH ++A+ +F +
Sbjct: 211 AVSNALIDMYGKCKH---------------------------------TEDALMIFEMIN 237
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
+ D + SW+++I A + L LF KM ++V+ + +TI+ +L C+
Sbjct: 238 EKD--------LFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHL 289
Query: 426 AALNIGREIHGHVVRVSMNKN-----ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
AAL GREIHG+++ + KN +L+ N +++MY KCGC++ ++F+ + KD+ +
Sbjct: 290 AALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVAS 349
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WN MI GY M+G G AL F M EA KPD V FV VLSACSHAG V++GR M
Sbjct: 350 WNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRME 409
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
EF + P +EHY C++D+LGRAG L EA D+ + +P+E N +W LL +CR+H N ++
Sbjct: 410 LEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELG 469
Query: 601 EAMASQIFGLITE--TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
+ +I L + +GSY+L+S++Y GR+E+A +VR + K + +KK G SWIE+K
Sbjct: 470 NVVGEKITQLEPKHCGSGSYILMSSLYGVVGRYEEALEVRRTMKEQNVKKTPGCSWIELK 529
Query: 659 RKIHMFSSGNSLQSDL 674
+++FS G+ +L
Sbjct: 530 DGLYVFSMGDRTHHEL 545
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 211/488 (43%), Gaps = 60/488 (12%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F +++ C +++++H L G + F+ + +++ Y + DA VFE P
Sbjct: 80 FPCVVRACCEFMEVRKIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELP--- 136
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ +LWN+++ G A+ ++ +M + G+ FT ++ MG +
Sbjct: 137 ERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDI----N 192
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H V +MG+ V + N LI MY K D+ +F+ + K+ SWN + S
Sbjct: 193 NGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHE 252
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
D DG L LF +M + P+ +T
Sbjct: 253 QCDDHDGTLRLFGKMLGSRVLPDVIT---------------------------------- 278
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGF-----EDYVFVKNALICVYGKHGDVKVAQN 328
I VL C+ LAA G+ IHG++I G D V + NA++ +Y K G +K A
Sbjct: 279 -ITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADI 337
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+F + K++ SWN +I YA G EA+++F ++ + + +P+V+++ V+ A +
Sbjct: 338 IFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCE----AQIKPDVVTFVGVLSACS 393
Query: 389 SNGRGEEALDLFRKMQLA-KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
G + +M+L V+ + ++ + + L E + R+ + N+
Sbjct: 394 HAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLG---EAYDLAQRIPLEDNL 450
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS-----MISGYGMNGLGENALATFE 502
++ LL G E G++V E+I + + S M S YG+ G E AL
Sbjct: 451 ILWMALLGACRLHGNAELGNVVGEKITQLEPKHCGSGSYILMSSLYGVVGRYEEALEVRR 510
Query: 503 EMIEAGFK 510
M E K
Sbjct: 511 TMKEQNVK 518
>gi|347954508|gb|AEP33754.1| chloroplast biogenesis 19, partial [Nasturtium officinale]
Length = 447
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 169/439 (38%), Positives = 262/439 (59%), Gaps = 12/439 (2%)
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADL--AADHMGKVIHGFVIKGGFE-DYVFVKNALICV 316
F MR G+E +LS C D ++ +G ++HG+ K G + +V V A++ +
Sbjct: 6 FSDMRFAGVEPNHITFIALLSGCGDFPSGSEALGDLLHGYACKLGLDRTHVMVGTAILGM 65
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
Y K G + A+ +F +E+KN V+WN +I Y +G + AV++F ++ D
Sbjct: 66 YSKRGRFRKARLIFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEMLNRD-------- 117
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
+ISW+A++ F G EEAL FR+MQ++ V + V I L+ C AL+ G IH
Sbjct: 118 LISWTAMVNGFVKKGFHEEALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHR 177
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
+V+ N+ V N L+++Y +CGC+E VF+++EK+ +++WNS+I G+ NG
Sbjct: 178 YVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHE 237
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
+L F +M E GFKPD V F L+ACSH GLV EG R F M R++RI P++EHY C+V
Sbjct: 238 SLFYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIV 297
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH-KNTDVAEAMASQIFGLITETT 615
DL RAG L++A +V++MPM+PN V G+LL +C+ H NT +AE + + L ++
Sbjct: 298 DLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACKNHGNNTLLAERLMKHLSDLNVKSH 357
Query: 616 GSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLK 675
+Y++LSN+YAA G+WE A+K+R K GLKK G S IE+ H+F +G+S +
Sbjct: 358 SNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDECTHVFMAGDSAHVETA 417
Query: 676 NVCEVLEELALQMENKGCV 694
N+ E+L ++ + +GCV
Sbjct: 418 NIREILGLMSSDLRLQGCV 436
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 155/292 (53%), Gaps = 13/292 (4%)
Query: 115 NALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRFSFGQIVHNHVLQMGF-QGNVH 172
N + + MR GV + TF ++ C G F + G ++H + ++G + +V
Sbjct: 1 NGAQGFSDMRFAGVEPNHITFIALLSGC---GDFPSGSEALGDLLHGYACKLGLDRTHVM 57
Query: 173 IVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG 232
+ ++GMY+K G+ + +FD + KN ++WN M G+ + + A++LF M
Sbjct: 58 VGTAILGMYSKRGRFRKARLIFDYMEDKNSVTWNTMIDGYMRSGQVNTAVKLFDEM---- 113
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
L + ++WT++++ + G EE + F M+ G++ AI L+ C +L A G
Sbjct: 114 LNRDLISWTAMVNGFVKKGFHEEALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGL 173
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
IH +V+ F++ V V N+LI +Y + G V+ A+ +F ++E++ +VSWN++I +A G
Sbjct: 174 WIHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANG 233
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
E++ F ++++ +P+ ++++ + A + G EE L F+ M+
Sbjct: 234 NAHESLFYFRKMQE----EGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMK 281
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
W +++ V G +E AL + +M+ GV D + AC +G+ SFG +H
Sbjct: 121 WTAMVNGFVKKGFHEEALSWFREMQISGVKPDYVAIIAALAACTNLGAL----SFGLWIH 176
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+V+ F+ NV + N LI +Y + G + + ++FDK+ + +SWN + GFA N +
Sbjct: 177 RYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAH 236
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
+L F++M+ EG +P+ VT+T L++ + G +EE + F M++
Sbjct: 237 ESLFYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKR 282
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 186/560 (33%), Positives = 307/560 (54%), Gaps = 44/560 (7%)
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
GNV N +I +K G++ ++ +LFD++R + I+W + SG+ + A LF R
Sbjct: 64 DGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDR 123
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
++ + N VTWT+++ + R ++ + LF+ M + + V + D A
Sbjct: 124 VD---AKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNV--------VSWNTMIDGYA 172
Query: 288 DHMGKVIHG-FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
+ G++ ++ + E V N ++ + + G ++ A+ LF + E++++SW A+I
Sbjct: 173 QN-GRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMI- 230
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGS-----------------------MERPNVISWSAV 383
AGL DEA+++F ++ + D S M + NVISW+ +
Sbjct: 231 ----AGLLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTM 286
Query: 384 IGAFASNGRGEEALDLFRKM-QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS 442
I G EEAL +F +M N T +L C+ A L G+++H + +
Sbjct: 287 ITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTV 346
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQ--IEKKDLITWNSMISGYGMNGLGENALAT 500
+ V + L+NMY KCG L +F+ ++DL++WN +I+ Y +G G+ A+
Sbjct: 347 YQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINF 406
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F+EM ++GFKPD V +V +LSACSHAGLV EG + FD +V++ I + +HYAC+VDL G
Sbjct: 407 FKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCG 466
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML 620
RAG L+EA ++ + +P+A VWG LL C +H N + + A ++ + E G+Y+L
Sbjct: 467 RAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLL 526
Query: 621 LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEV 680
LSNIYA++G+W +AA+VR+ K KGLKK G SWIEV ++H+F G+ S K + +
Sbjct: 527 LSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNRVHVFVVGDKSHSQSKLIYSL 586
Query: 681 LEELALQMENKGCVPDNDII 700
L +L +M+ G P+ND I
Sbjct: 587 LRDLHSKMKKAGYEPNNDFI 606
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 193/419 (46%), Gaps = 38/419 (9%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
+C I + +++ +++ A + ++ Y R ++ DA +F P + +
Sbjct: 110 KCGMIEEARRLFDRV---DAKKNVVTWTAMVGGYIRSNKISDAEKLFNEMP---NKNVVS 163
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN+++ NG ++A+ L+ KM + V+ ++ + + + R F ++
Sbjct: 164 WNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRL---FDRMPE 220
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
V+ M A G + ++ LF+++ ++ SWN M +G N D
Sbjct: 221 RDVIS------------WTAMIA--GLLDEALDLFERMPERDLPSWNTMITGLIQNGDLR 266
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVV 278
A +LF M + N ++WT++++ + G EE + +F M+ G + V
Sbjct: 267 RARKLFNEMP----KKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSV 322
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE--IEEK 336
L C++LA G+ +H + K ++D FV +ALI +Y K G++ A+ +F + ++
Sbjct: 323 LGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQR 382
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
++VSWN +I +YA G EA+ F ++ K S +P+ +++ ++ A + G EE
Sbjct: 383 DLVSWNGIIAAYAHHGYGKEAINFFKEMRK----SGFKPDDVTYVGLLSACSHAGLVEEG 438
Query: 397 LDLFRKM-QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
L F ++ + ++ + L+ +C + L +E G + R+ + V LL
Sbjct: 439 LKYFDELVKDRSILVREDHYACLVDLCGRAGRL---KEAFGFIERLETKPSARVWGALL 494
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 179/396 (45%), Gaps = 49/396 (12%)
Query: 17 PSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQL----IVTGANASAFLAARVLSI 72
P R +++++N + +L QC I + +++ +++ +++ A L L +
Sbjct: 188 PER--NVVSWNTVM-----SMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLLDEALDL 240
Query: 73 YARF------------------GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYE 114
+ R G L AR +F P K + + W +++ V G E
Sbjct: 241 FERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMP---KKNVISWTTMITGCVQEGESE 297
Query: 115 NALKLYVKMRKL-GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHI 173
ALK++ +M G + TF V+ AC + GQ VH + + +Q + +
Sbjct: 298 EALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGL----GEGQQVHQIISKTVYQDSTFV 353
Query: 174 VNELIGMYAKMGQMSDSFKLFDK--VRVKNYISWNMMFSGFALNFDCDGALELFKRMELE 231
V+ LI MY+K G++ + K+FD ++ +SWN + + +A + A+ FK M
Sbjct: 354 VSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKS 413
Query: 232 GLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHM 290
G +P+ VT+ LLS+ + G +EE + FD +++ R I V + A ++ +C A +
Sbjct: 414 GFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCG--RAGRL 471
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV---AQNLFSEIEEKNIVSWNALITS 347
K GF+ + + V AL+ H +VK+ A E+E +N ++ L
Sbjct: 472 -KEAFGFIERLETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNI 530
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
YA G EA V +L+ D G ++P SW V
Sbjct: 531 YASTGKWREAARV--RLKMKDKGLKKQPGC-SWIEV 563
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
+++ N+ N ++ K G + E +F+++ + D+ITW ++ISGY G+ E A F
Sbjct: 62 TVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLF 121
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
+ ++A K + V + A++ + +++ ++F+ M + + + M+D +
Sbjct: 122 DR-VDA--KKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNK-----NVVSWNTMIDGYAQ 173
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLN 589
G + A + + MP E N W T+++
Sbjct: 174 NGRIDSAMYLFEKMP-ERNVVSWNTVMS 200
>gi|147791119|emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
Length = 677
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 203/617 (32%), Positives = 312/617 (50%), Gaps = 76/617 (12%)
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
VSNG Y AL LY K+ VL FTFP +++A + S GQI+H +++ GF
Sbjct: 69 VSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQ----GQILHTQLIKTGF 124
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+++ L MY K+ +S + K+F+++ +N S N+ SGF+ N AL FK+
Sbjct: 125 HLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQ 184
Query: 228 MELEGLEPNFVT--------------------------------WTSLLSSHARCGRLEE 255
+ L PN VT T++++ ++ CG L
Sbjct: 185 VGLGNFRPNSVTIASVLPACASVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVL 244
Query: 256 TMDLFDMMRKRGI-----------EVGAE---------------------AIAVVLSVCA 283
+FD + + + + GA + +LS C+
Sbjct: 245 AKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACS 304
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE-EKNIVSWN 342
L G+ IHG V+K V AL+ +Y K G A +F E+ +N+V+WN
Sbjct: 305 KLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWN 364
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
++I G D AVE+F QLE +G P+ +W+ +I F+ G+ EA F K
Sbjct: 365 SMIAGMMLNGQSDIAVELFEQLEP-EG---LEPDSATWNTMISGFSQQGQVVEAFKFFHK 420
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
MQ A V+A+ +I+ LL C+ +AL G+EIHGH +R +++ + + L++MYMKCG
Sbjct: 421 MQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGH 480
Query: 463 LEEGHLVF--EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
VF QI+ D WN+MISGYG NG ++A F +M E +P+ V++L
Sbjct: 481 SYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSIL 540
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
S CSH G ++ G ++F MM R++ + P EH+ CMVDLLGR+G L+EA +++ MP E +
Sbjct: 541 SVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMP-EAS 599
Query: 581 AYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRIS 640
V+ +LL +CR H ++ + E MA ++ L + +++LSNIYA GRW D +VR
Sbjct: 600 VSVFASLLGACRHHSDSALGEEMAKKLSELEPQDPTPFVILSNIYAVQGRWGDVERVREM 659
Query: 641 AKTKGLKKVAGQSWIEV 657
+GLKK G S I V
Sbjct: 660 MNDRGLKKPPGCSSIGV 676
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 184/371 (49%), Gaps = 15/371 (4%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
+L C ++ QVH I G + ++A V+++Y+ G L A+ VF+ +
Sbjct: 200 VLPACASVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQI---LDKN 256
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ +N+ + + NG ++ + G + + T ++ AC + RF G
Sbjct: 257 VVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRF----G 312
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR-VKNYISWNMMFSGFAL 214
+ +H V+++ + + L+ MY+K G ++ +F ++ +N ++WN M +G L
Sbjct: 313 RQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMML 372
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
N D A+ELF+++E EGLEP+ TW +++S ++ G++ E F M+ G+ ++
Sbjct: 373 NGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKS 432
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS--E 332
I +L C+ L+A GK IHG I+ + F+ ALI +Y K G +A+ +F +
Sbjct: 433 ITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQ 492
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
I+ + WNA+I+ Y G A E+F+Q+++ +PN + +++ + G
Sbjct: 493 IKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQE----EKVQPNSATLVSILSVCSHTGE 548
Query: 393 GEEALDLFRKM 403
+ LF+ M
Sbjct: 549 IDRGWQLFKMM 559
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%)
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
IS I SNG EAL L+ K+ + V+ + T LL A+ + G+ +H
Sbjct: 59 ISMKRDIAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQ 118
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
+++ + +I L +MYMK L VFE++ ++L + N ISG+ NG A
Sbjct: 119 LIKTGFHLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREA 178
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
L F+++ F+P+ V +VL AC+ L
Sbjct: 179 LGAFKQVGLGNFRPNSVTIASVLPACASVEL 209
>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial; Flags: Precursor
gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 787
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 209/694 (30%), Positives = 339/694 (48%), Gaps = 118/694 (17%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
+VH ++I G + A + +L +Y + G L DA VF+ P + W++++ +
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPV---RDLVAWSTLVSSCL 178
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
NG AL+++ M GV D T V+ C +G R S VH + + F
Sbjct: 179 ENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARS----VHGQITRKMFD 234
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+ + N L+ MY+K G + S ++F+K+ KN +SW M S + + AL F M
Sbjct: 235 LDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Query: 229 ELEGLEPNFVTWTSLLSS------------------------------------HARCGR 252
G+EPN VT S+LSS +A CG+
Sbjct: 295 IKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGK 354
Query: 253 LE-------------------------------ETMDLFDMMRKRGIEVGAEAIAVVLSV 281
L + + LF M + I+ A +A +S
Sbjct: 355 LSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
C + +GK IHG VI+ D FV+N+LI +Y K G V A +F++I+ +++V+W
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTW 473
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
N+++ +++ G EA+ LF
Sbjct: 474 NSMLCGFSQNGNSVEAIS---------------------------------------LFD 494
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
M + + N VT ++ C+ +L G+ +H H + +S K++ L++MY KCG
Sbjct: 495 YMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVH-HKLIISGLKDLFTDTALIDMYAKCG 553
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
L VF + + +++W+SMI+ YGM+G +A++TF +M+E+G KP+ V F+ VLS
Sbjct: 554 DLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLS 613
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
AC H+G V EG+ F++M + F + P EH+AC +DLL R+G L+EA +K MP +A
Sbjct: 614 ACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADA 672
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISA 641
VWG+L+N CR+H+ D+ +A+ + + ++T+ TG Y LLSNIYA G WE+ ++R +
Sbjct: 673 SVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAM 732
Query: 642 KTKGLKKVAGQSWIEVKRKIHMFSSG--NSLQSD 673
K+ LKKV G S IE+ +K+ F +G N +Q+D
Sbjct: 733 KSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTD 766
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 150/607 (24%), Positives = 269/607 (44%), Gaps = 116/607 (19%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGA-NASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
L + C ++ + Q+H L+VTG +++ YA G +R VFE P+
Sbjct: 7 LFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPY---P 63
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
S ++ +++ NV L + A+ LY ++ F FP V+RAC GS R S G
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACA--GS-REHLSVG 120
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
VH +++ G + I L+ MY + G +SD+ K+FD + V++ ++W+ + S N
Sbjct: 121 GKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN 180
Query: 216 FDCDGALELFKRMELEGLEPNFVTW----------------------------------- 240
+ AL +FK M +G+EP+ VT
Sbjct: 181 GEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLC 240
Query: 241 TSLLSSHARCGRL-------------------------------EETMDLFDMMRKRGIE 269
SLL+ +++CG L E+ + F M K GIE
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 300
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQN 328
+ VLS C + GK +HGF ++ + +Y + AL+ +Y + G + +
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 360
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+ + ++NIV+WN+LI+ YA G+ +A+ +F Q
Sbjct: 361 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQ------------------------- 395
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
M ++ ++ T++ +S C + + +G++IHGHV+R ++
Sbjct: 396 --------------MVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-F 440
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
VQN L++MY K G ++ VF QI+ + ++TWNSM+ G+ NG A++ F+ M +
Sbjct: 441 VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSY 500
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+ + V F+AV+ ACS G + +G+ + ++ + + ++D+ + G L A
Sbjct: 501 LEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTD--TALIDMYAKCGDLNAA 558
Query: 569 SDIVKNM 575
+ + M
Sbjct: 559 ETVFRAM 565
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 122/252 (48%), Gaps = 19/252 (7%)
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDG---GSMERPNVISWSAVIGAFASNGRGEEALDLF 400
LI SYA G D + VF D G + + NV W ++ A A+DL+
Sbjct: 40 LIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNV--WCHLLDA---------AIDLY 88
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAA-LNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
++ + +L CA S L++G ++HG +++ ++ + +++ LL MY +
Sbjct: 89 HRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQ 148
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
G L + VF+ + +DL+ W++++S NG AL F+ M++ G +PD V ++V
Sbjct: 149 TGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISV 208
Query: 520 LSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
+ C+ G + R + + R+ F ++ + + ++ + + G L + I + + +
Sbjct: 209 VEGCAELGCLRIARSVHGQITRKMFDLDETLCN--SLLTMYSKCGDLLSSERIFEKIA-K 265
Query: 579 PNAYVWGTLLNS 590
NA W +++S
Sbjct: 266 KNAVSWTAMISS 277
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 201/710 (28%), Positives = 353/710 (49%), Gaps = 133/710 (18%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S Y + G L +AR +F+ + +++ W ++ ++ A +L+V+M++ G
Sbjct: 89 MISGYVKSGNLGEARKLFDGM---VERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGT 145
Query: 129 LGDGFTFPLVIRACK--FMGSFRFRFSFGQI--VHNHVLQMGFQGNVHIVNELIGMYAKM 184
D TF ++ C MG+ QI V ++++G+ + + N L+ Y K
Sbjct: 146 EPDYVTFVTLLSGCNGHEMGN--------QITQVQTQIIKLGYDSRLIVGNTLVDSYCKS 197
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
++ D A +LFK M E + V++ +++
Sbjct: 198 NRL-------------------------------DLACQLFKEMP----EIDSVSYNAMI 222
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH--MGKVIHGFVIKGG 302
+ +++ G E+ ++LF M+ G++ A VL CA++ D +G+ IH FVIK
Sbjct: 223 TGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDDIVLGQQIHSFVIKTN 280
Query: 303 FEDYVFVKNALICVYGKHGDV-------------------------------KVAQNLFS 331
F VFV NAL+ Y KH V K A +LF
Sbjct: 281 FVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFR 340
Query: 332 EIE-----------------EKNIVSW----------------------NALITSYAEAG 352
E++ N + W N+L+ YA+ G
Sbjct: 341 ELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCG 400
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+EA +F+ L + + W+A+I A+ G EE L LF KM+ A V+A+
Sbjct: 401 KFEEAEMIFTNLT--------HRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQ 452
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
T + LL A A+L++G+++H +++ N+ + LL++Y KCG +++ F++
Sbjct: 453 ATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQE 512
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+ +++++WN+MIS Y NG E L +F+EM+ +G +PD V+F+ VLSACSH+GLV EG
Sbjct: 513 MPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEG 572
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
F+ M + ++++P+ EHYA +VD+L R+G EA ++ MP++P+ +W ++LN+CR
Sbjct: 573 LWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACR 632
Query: 593 MHKNTDVAEAMASQIFGLIT-ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
+HKN ++A A Q+F + Y+ +SNIYAA+G+WE+ +KV + + +G+KK+
Sbjct: 633 IHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPA 692
Query: 652 QSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
SW+E+K + HMFS+ + ++ + + ++ L ME G PD L
Sbjct: 693 YSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCAL 742
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 143/592 (24%), Positives = 260/592 (43%), Gaps = 103/592 (17%)
Query: 45 HQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSIL 104
+Q+ QV Q+I G ++ + ++ Y + RL A +F+ P + S+ +N+++
Sbjct: 166 NQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMP---EIDSVSYNAMI 222
Query: 105 RVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
+GL E A+ L+V+M+ G+ FTF V+ C +G GQ +H+ V++
Sbjct: 223 TGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIG--LDDIVLGQQIHSFVIK 278
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
F NV + N L+ Y+K + D+ KLFD++ ++ +S+N++ SG+A + A +L
Sbjct: 279 TNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDL 338
Query: 225 FKRMELEGLE-------------PNFVTW----------------------TSLLSSHAR 249
F+ ++ + N + W SL+ +A+
Sbjct: 339 FRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAK 398
Query: 250 CGRLEET-------------------------------MDLFDMMRKRGIEVGAEAIAVV 278
CG+ EE + LF+ MR+ + A +
Sbjct: 399 CGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASL 458
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
L A +A+ +GK +H F+IK GF VF +AL+ VY K G +K A F E+ ++NI
Sbjct: 459 LRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNI 518
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
VSWNA+I++YA+ G + ++ F ++ L G +P+ +S+ V+ A + +G EE L
Sbjct: 519 VSWNAMISAYAQNGEAEATLKSFKEM-VLSG---LQPDSVSFLGVLSACSHSGLVEEGLW 574
Query: 399 LFRKM-QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
F M Q+ K+ + ++ + S N ++ + + ++ + ++ + +LN
Sbjct: 575 HFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKL---MAEMPIDPDEIMWSSVLN-- 629
Query: 458 MKCGCLEEGHL-------VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
C + L +F E +D + +M + Y G EN + M + G K
Sbjct: 630 -ACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVK 688
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRA 562
L A S + +E M R PQ+E +D+L +
Sbjct: 689 K--------LPAYSWVEIKHETH----MFSANDRCHPQIEEIRKKIDMLTKT 728
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 126/235 (53%), Gaps = 10/235 (4%)
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
I ++K GF+ N + + K+G++ A+ LF ++ KN VS N +I+ Y ++G
Sbjct: 39 IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
EA ++F G +ER ++W+ +IG ++ + +EA +LF +MQ + V
Sbjct: 99 LGEARKLFD-------GMVER-TAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYV 150
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
T LLS C N ++ ++++ + ++V N L++ Y K L+ +F+++
Sbjct: 151 TFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEM 210
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
+ D +++N+MI+GY +GL E A+ F EM +G KP F AVL C++ GL
Sbjct: 211 PEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGL 263
>gi|225424928|ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
[Vitis vinifera]
gi|296086418|emb|CBI32007.3| unnamed protein product [Vitis vinifera]
Length = 617
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 203/617 (32%), Positives = 312/617 (50%), Gaps = 76/617 (12%)
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
VSNG Y AL LY K+ VL FTFP +++A + S GQI+H +++ GF
Sbjct: 9 VSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQ----GQILHTQLIKTGF 64
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+++ L MY K+ +S + K+F+++ +N S N+ SGF+ N AL FK+
Sbjct: 65 HLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQ 124
Query: 228 MELEGLEPNFVT--------------------------------WTSLLSSHARCGRLEE 255
+ L PN VT T++++ ++ CG L
Sbjct: 125 VGLGNFRPNSVTIASVLPACASVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVL 184
Query: 256 TMDLFDMMRKRGI-----------EVGAE---------------------AIAVVLSVCA 283
+FD + + + + GA + +LS C+
Sbjct: 185 AKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACS 244
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE-EKNIVSWN 342
L G+ IHG V+K V AL+ +Y K G A +F E+ +N+V+WN
Sbjct: 245 KLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWN 304
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
++I G D AVE+F QLE +G P+ +W+ +I F+ G+ EA F K
Sbjct: 305 SMIAGMMLNGQSDIAVELFEQLEP-EG---LEPDSATWNTMISGFSQQGQVVEAFKFFHK 360
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
MQ A V+A+ +I+ LL C+ +AL G+EIHGH +R +++ + + L++MYMKCG
Sbjct: 361 MQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGH 420
Query: 463 LEEGHLVF--EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
VF QI+ D WN+MISGYG NG ++A F +M E +P+ V++L
Sbjct: 421 SYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQEEKVQPNSATLVSIL 480
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
S CSH G ++ G ++F MM R++ + P EH+ CMVDLLGR+G L+EA +++ MP E +
Sbjct: 481 SVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMP-EAS 539
Query: 581 AYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRIS 640
V+ +LL +CR H ++ + E MA ++ L + +++LSNIYA GRW D +VR
Sbjct: 540 VSVFASLLGACRHHSDSALGEEMAKKLSELEPQDPTPFVILSNIYAVQGRWGDVERVREM 599
Query: 641 AKTKGLKKVAGQSWIEV 657
+GLKK G S I V
Sbjct: 600 MNDRGLKKPPGCSSIGV 616
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 184/371 (49%), Gaps = 15/371 (4%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
+L C ++ QVH I G + ++A V+++Y+ G L A+ VF+ +
Sbjct: 140 VLPACASVELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQI---LDKN 196
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ +N+ + + NG ++ + G + + T ++ AC + RF G
Sbjct: 197 VVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRF----G 252
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR-VKNYISWNMMFSGFAL 214
+ +H V+++ + + L+ MY+K G ++ +F ++ +N ++WN M +G L
Sbjct: 253 RQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMML 312
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
N D A+ELF+++E EGLEP+ TW +++S ++ G++ E F M+ G+ ++
Sbjct: 313 NGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKS 372
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS--E 332
I +L C+ L+A GK IHG I+ + F+ ALI +Y K G +A+ +F +
Sbjct: 373 ITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQ 432
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
I+ + WNA+I+ Y G A E+F+Q+++ +PN + +++ + G
Sbjct: 433 IKPDDPAFWNAMISGYGRNGKYQSAFEIFNQMQE----EKVQPNSATLVSILSVCSHTGE 488
Query: 393 GEEALDLFRKM 403
+ LF+ M
Sbjct: 489 IDRGWQLFKMM 499
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%)
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
I SNG EAL L+ K+ + V+ + T LL A+ + G+ +H +++
Sbjct: 5 IAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGF 64
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
+ +I L +MYMK L VFE++ ++L + N ISG+ NG AL F++
Sbjct: 65 HLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQ 124
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGL 528
+ F+P+ V +VL AC+ L
Sbjct: 125 VGLGNFRPNSVTIASVLPACASVEL 149
>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 209/657 (31%), Positives = 337/657 (51%), Gaps = 76/657 (11%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
+ Q+ L +G N +L L Y + G ++ A+++FE P + + WN+++
Sbjct: 71 EANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMP---RRDVVSWNALIC 127
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
NG +AL+++V+M + G T ++ +C G F G+ +H ++
Sbjct: 128 GYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSC---GRPDIIFQ-GKAIHGFGIKS 183
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
G + + N L MYAK + + LF+++ K +SWN M + N D A+ +F
Sbjct: 184 GLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVF 243
Query: 226 KRMELEGLEPNFVTWTSLLS-----------------------------SHARCGRLEET 256
K+M+ E +E N+VT SLLS S+A CG +E
Sbjct: 244 KQMQKERVEVNYVTIISLLSANAHLDSTHCYVIKTGFATDASVITSLVCSYAGCGNIESA 303
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV----------------IK 300
L+++M +R + +++ + +MG V+ F I
Sbjct: 304 GLLYNLMPQRNL------VSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSIL 357
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
GF D F+ + L G H A L + + +V N LI+ Y++ G + +
Sbjct: 358 HGFTDPTFIGSGL----GIH-----AYGLKTGLCADCLVV-NGLISMYSKFGDIETVFSL 407
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
FS+ M +ISW++VI A GR +A++LF +M++ +++TI+ LL+
Sbjct: 408 FSE--------MGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLA 459
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
C+E L G +H +V+R +++ ++ L++MY+KCG LE VF+ I++ L T
Sbjct: 460 GCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLAT 519
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WN+MISGYG++G AL+ + EM E G KPD + F+ VLSAC+H GLV EG+R F M
Sbjct: 520 WNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMR 579
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
+F + P ++H ACMVDLL RAG L+EA VKNM +EP++ +WG LL SC +H+ +
Sbjct: 580 EDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTSCCIHQELKLG 639
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
E +A ++ L + G Y+L+SN+YA+ GRW+D A+VR K G +G S IEV
Sbjct: 640 ECLAKRLLLLDYYSGGLYVLMSNLYASKGRWDDVARVRKMMKDTGGDGSSGISLIEV 696
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LL C + L+ ++HN ++ + FL ++ +Y + GRL A VF++ C
Sbjct: 457 LLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPC 516
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
++ WN+++ +G AL Y +M++ G+ D TF V+ AC G
Sbjct: 517 LAT---WNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGG 566
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 209/736 (28%), Positives = 354/736 (48%), Gaps = 115/736 (15%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L+ C + + QVH ++ G + + +L +YA+ RL D+ +VF P
Sbjct: 187 VLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELP--- 243
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + + W++++ V N L+L+ +M+ +GV + + R+C + + R
Sbjct: 244 EKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRL--- 300
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H+H L+ F ++ + + MYAK G+M+D+ K+ + + S+N + G+A
Sbjct: 301 -GKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYA 359
Query: 214 -------------------LNFD---CDGALELFK--RMELEGLE-----------PNFV 238
L FD GAL R +LEG + N
Sbjct: 360 RSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNIC 419
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRG------------------------------- 267
++L + +C L E DLFDMM +R
Sbjct: 420 VANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSR 479
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
+E VL CA A + G IH +IK G FV AL+ +Y K G ++ A
Sbjct: 480 MEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKAD 539
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+ E+K + +SW+A+I F
Sbjct: 540 KIHDRTEQKTM---------------------------------------VSWNAIISGF 560
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
+ + E+A F +M V ++ T + +L CA A + +G++IH +++ + ++
Sbjct: 561 SLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDV 620
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
+ + L++MY KCG +++ L+FE+ +D +TWN+M+ GY +GLGE AL FE M
Sbjct: 621 YICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLV 680
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
KP+ FV+VL AC+H GLV++G FD+M+ E+ ++PQ EHY+CMVD+LGR+G + E
Sbjct: 681 NVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDE 740
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A ++V+ MP E +A +W LL+ C++H N +VAE + L + + + +LLSNIYA
Sbjct: 741 ALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYAD 800
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
+G W + +++R + LKK G SWIE+K ++H F G+ + + E L L +
Sbjct: 801 AGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGE 860
Query: 688 MENKGCVPDNDIILWE 703
M++ G +PD D++L E
Sbjct: 861 MQSVGYIPDCDVLLDE 876
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 161/681 (23%), Positives = 283/681 (41%), Gaps = 156/681 (22%)
Query: 14 PSNPSRPFSIITYNNSL----LDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLA 66
P P+ FS + N + + F H+ Q+C + L KQ H ++I G + F++
Sbjct: 28 PPIPTNNFSTLAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVS 87
Query: 67 A-------------------------------RVLSIYARFGRLFDARNVFETAPFDCKS 95
++S YA G + AR F P +
Sbjct: 88 NCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMP---ER 144
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ WNS++ + NG ++ ++++M + GV D + +V++AC G+ G
Sbjct: 145 DVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKAC---GALE-ECDMG 200
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
VH V++ GF +V + L+GMYAK ++ DS +F ++ KN++SW+ M +G N
Sbjct: 201 VQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQN 260
Query: 216 FDCDGALELFKRMELEGL-----------------------------------EPNFVTW 240
LELFK M+ G+ + +
Sbjct: 261 DRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVG 320
Query: 241 TSLLSSHARCGRLEETMDL-------------------------------FDMMRKRGIE 269
T+ L +A+CGR+ + + F ++ K G+
Sbjct: 321 TATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLG 380
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
++ L+ CA + D G+ +HG +K + V NA++ +YGK + A +L
Sbjct: 381 FDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDL 440
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
F +E ++ VSWNA +I A
Sbjct: 441 FDMMERRDAVSWNA---------------------------------------IIAACEQ 461
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
NG EE L F M +++ + T +L CA ALN G EIH +++ M + V
Sbjct: 462 NGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFV 521
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
L++MY KCG +E+ + ++ E+K +++WN++ISG+ + E+A F M+E G
Sbjct: 522 GAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGV 581
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC--MVDLLGRAGLLQE 567
PD + AVL C++ V G++I ++++ E Q + Y C +VD+ + G +Q+
Sbjct: 582 NPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQ---ELQSDVYICSTLVDMYSKCGNMQD 638
Query: 568 ASDIVKNMPMEPNAYVWGTLL 588
+ + + P + W +L
Sbjct: 639 SQLMFEKAP-NRDFVTWNAML 658
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 222/465 (47%), Gaps = 49/465 (10%)
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
TF + + C S + G+ H ++ GF+ + N L+ MY K + + K+
Sbjct: 51 TFSHIYQECSKQNSL----NPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKV 106
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FDK+ +++ +S+N + SG+A + D A + F M E + V+W S++S + G
Sbjct: 107 FDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMP----ERDVVSWNSVISGFLQNGEC 162
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
+++D+F M + G+ ++AVVL C L MG +HG V+K GF+ V +AL
Sbjct: 163 RKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSAL 222
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ +Y K + + ++FSE+ EKN VSW+A+I +
Sbjct: 223 LGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQ----------------------- 259
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
N R E L+LF++MQ V + + L CA +AL +G+E
Sbjct: 260 ----------------NDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKE 303
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+H H ++ + +I+V L+MY KCG + + V + K L ++N++I GY +
Sbjct: 304 LHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDR 363
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
G AL +F+ +++ G D + L+AC+ EGR++ + V+ + A
Sbjct: 364 GFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANA 423
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
++D+ G+ L EASD+ +M +A W ++ +C + N +
Sbjct: 424 -ILDMYGKCKALAEASDLF-DMMERRDAVSWNAIIAACEQNGNEE 466
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 195/662 (29%), Positives = 335/662 (50%), Gaps = 81/662 (12%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH G + +AF+ + ++ Y+ G + DAR VF+ ++ W +++
Sbjct: 553 VHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGI---VGKDAVAWTAMVSCYSE 609
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
N EN L+++ KMR + F V+RA + S G+ +H ++ +
Sbjct: 610 NDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSV----VLGKGIHACSVKTLYDT 665
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
H+ L+ MYAK G + D+ F+ V + I W++M
Sbjct: 666 ERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLM--------------------- 704
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
+S +A+C + E+ +LF M + + +++ VL CA++
Sbjct: 705 --------------ISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLD 750
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+GK IH IK G E +FV NALI +Y K D+
Sbjct: 751 LGKQIHNHAIKIGHESELFVGNALIDLYAKCSDM-------------------------- 784
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+ ++E+FS L + N +SW+ +I ++ +G GE AL +FR+M+ A V
Sbjct: 785 -----ESSLEIFSSLRDV--------NEVSWNTIIVGYSKSGFGEAALSVFREMRAASVP 831
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
+ VT S +L CA +A++N ++H + + + N + +V N L++ Y KCGC+ + +
Sbjct: 832 STQVTYSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREI 891
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
FE +++ DL++WN++ISGY ++G A F+ M + K + + FVA+LS C GLV
Sbjct: 892 FETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLV 951
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
++G +FD M + IEP MEHY C+V LLGRAG L +A + + ++P P+A VW LL+
Sbjct: 952 SQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLS 1011
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
SC +HKN ++ A ++ + + +Y+LLSN+Y+A+G + A R S + G++K
Sbjct: 1012 SCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKE 1071
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKN 709
G SW+E+K ++H FS G+ ++ + +LE L L+ +G VPD D +L ++ ++
Sbjct: 1072 PGLSWVEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEEQK 1131
Query: 710 VK 711
V+
Sbjct: 1132 VR 1133
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 166/359 (46%), Gaps = 48/359 (13%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K +H + T + + +L +YA+ G + DAR FE D +LW+ ++
Sbjct: 652 KGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTND---DVILWSLMISRY 708
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
E A +L+++M + V + F+ V++AC M G+ +HNH +++G
Sbjct: 709 AQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMP----LLDLGKQIHNHAIKIGH 764
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ + + N LI +YAK M S ++F +R N +SWN + G++ + + AL +F+
Sbjct: 765 ESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFRE 824
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M + VT++S VL CA A+
Sbjct: 825 MRAASVPSTQVTYSS-----------------------------------VLRACASTAS 849
Query: 288 -DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
+H+G+V H + K F V N+LI Y K G ++ A+ +F ++E ++VSWNA+I+
Sbjct: 850 INHVGQV-HCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIIS 908
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
YA G A E+F + K + + N I++ A++ S G + L LF M+L
Sbjct: 909 GYAVHGQAAMAQELFDMMSK----NSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRL 963
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 167/368 (45%), Gaps = 24/368 (6%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+LQ C + L KQ+HN I G + F+ ++ +YA+ + + +F + D
Sbjct: 739 VLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSL-RDV 797
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
S WN+I+ +G E AL ++ +MR V T+ V+RAC S
Sbjct: 798 NEVS--WNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINH--- 852
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
GQ VH + + F + + N LI YAK G + D+ ++F+ ++ + +SWN + SG+A
Sbjct: 853 VGQ-VHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYA 911
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGIEVGA 272
++ A ELF M ++ N +T+ +LLS G + + + LFD MR GIE
Sbjct: 912 VHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSM 971
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS- 331
E ++ + A + ++ F+ V AL+ H +V++ + FS
Sbjct: 972 EHYTCIVRLLGR--AGRLNDALN-FIGDIPSAPSAMVWRALLSSCIVHKNVELGR--FSA 1026
Query: 332 ----EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
EIE ++ ++ L Y+ AG D+ F + + G + P +SW + G
Sbjct: 1027 EKVLEIEPQDETTYVLLSNMYSAAGSLDQV--AFFRKSMRNIGVRKEPG-LSWVEIKGEV 1083
Query: 388 ASNGRGEE 395
+ G E
Sbjct: 1084 HAFSVGSE 1091
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 122/301 (40%), Gaps = 42/301 (13%)
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIK-GGFEDY-VFVKNALICVYGKHGDVKVAQ 327
V + A A +L C G+ +HG V++ GG +F N L+ +Y K G A
Sbjct: 426 VDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAH 485
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+F + E+ N++S+ ++
Sbjct: 486 RVFDGLPER---------------------------------------NMVSFVTLVQGH 506
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
A G EEA LF++++ N ++ +L + L + +H ++ ++N
Sbjct: 507 ALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNA 566
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
V + L++ Y CG + + VF+ I KD + W +M+S Y N EN L F +M A
Sbjct: 567 FVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVA 626
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
K + A +VL A V G+ I V+ + + Y ++D+ + G +++
Sbjct: 627 VSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTL-YDTERHVYGALLDMYAKCGNIED 685
Query: 568 A 568
A
Sbjct: 686 A 686
>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 692
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 220/722 (30%), Positives = 354/722 (49%), Gaps = 107/722 (14%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F LL +C K + + K +H QL+ TG+ +S +L ++++YA+ G + A+ VFE+
Sbjct: 13 FVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESIT 72
Query: 91 FDCKSSSLLWNSILRVNVSNGL--YENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
+ WN ++ G Y ++L+ +MR L +G TF V F +
Sbjct: 73 ---NKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGV-----FTAAS 124
Query: 149 RFRFSFGQI-VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
+FG + H ++ +V + + LI MY K+G M D+ K+FD +
Sbjct: 125 SSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIP--------- 175
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
E N V+W +++S +A E +LF +MR+
Sbjct: 176 --------------------------ERNTVSWATIISGYAMERMAFEAWELFLLMRR-- 207
Query: 268 IEVGAEAIAVVLSVCADLAAD---HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
E GA + SV + L H GK IH +K G V NAL+ +YGK G +
Sbjct: 208 -EEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLD 266
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A F +K+ ++W+A+IT YA+AG EA+ +F + L+G +P+ ++ VI
Sbjct: 267 DAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMH-LNG---NKPSEFTFVGVI 322
Query: 385 GAFASNGRGEEALDL--------------FRK---------------------------- 402
A + G EE + FRK
Sbjct: 323 NACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKGFDYLKEPDIV 382
Query: 403 ------MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
MQ+ +++ + +T++ +L C+ AAL G++IH ++ + + + + L M
Sbjct: 383 LWTSCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTM 442
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCG LE+G+LVF ++ +D++TWN+MISG NG G AL FEE+ KPD V F
Sbjct: 443 YAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTF 502
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
V VLSACSH GLV G+ F MM+ EF I P++EHYACMVD+L RAG L E + +++
Sbjct: 503 VNVLSACSHMGLVERGKVYFRMMLDEFGIIPRVEHYACMVDILSRAGKLHETKEFIESAT 562
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAK 636
++ +W LL +CR ++N ++ ++ L ++ + +Y+LLS+IY A GR +D +
Sbjct: 563 IDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVER 622
Query: 637 VRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
VR K +G+ K G SWIE+K ++H+F G+ + + +C L L M+++
Sbjct: 623 VRRLMKLRGVNKEPGCSWIELKSQVHVFVVGDQIHPQIVKICSELRRLRDHMKDECYESF 682
Query: 697 ND 698
ND
Sbjct: 683 ND 684
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 213/717 (29%), Positives = 364/717 (50%), Gaps = 102/717 (14%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+Q H + T + F A+ +L++Y + G +F+AR++F+ P + +++ W +++
Sbjct: 136 RQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMP---ERNAVSWATMISGY 192
Query: 108 VSNGLYENALKLYVKMR--KLGVLGDGFTFPLVIRA--CKFMGSFRFRFSFGQIVHNHVL 163
S L + A +L+ MR + G + F F V+ A C + + G+ VH+ +
Sbjct: 193 ASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYML------VNTGRQVHSLAM 246
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
+ G V + N L+ MY K G + D+ K F
Sbjct: 247 KNGLVCIVSVANALVTMYVKCGSLEDALKTF----------------------------- 277
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV-VLSVC 282
EL G N +TW+++++ A+ G ++ + LF M + G E+ +E V V++ C
Sbjct: 278 -----ELSG-NKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSG-ELPSEFTLVGVINAC 330
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
+D A G+ +HG+ +K G+E ++V +AL+ +Y K G + A+ F I++
Sbjct: 331 SDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQ------- 383
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
P+V+ W+++I + NG E AL+L+ K
Sbjct: 384 --------------------------------PDVVLWTSIITGYVQNGDYEGALNLYGK 411
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
MQL V+ N +T++ +L C+ AAL+ G+++H +++ + + I + + L MY KCG
Sbjct: 412 MQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGS 471
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
L++G+ +F ++ +D+I+WN+MISG NG G L FE+M G KPD V FV +LSA
Sbjct: 472 LDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSA 531
Query: 523 CSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAY 582
CSH GLV+ G F MM EF I P +EHYACMVD+L RAG L EA + +++ ++
Sbjct: 532 CSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLC 591
Query: 583 VWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAK 642
+W LL + + H++ D+ ++ L + + +Y+LLS+IY A G+WED +VR K
Sbjct: 592 LWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMK 651
Query: 643 TKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP-----DN 697
+G+ K G SWIE+K H+F G+++ + + L+ L M+++G P
Sbjct: 652 ARGVTKEPGCSWIELKSLTHVFVVGDNMHPQIDEIRLGLKLLTKLMKDEGYQPLLDSLPP 711
Query: 698 DIILWEMMGKKNVKRIQR--IRADNIKSKHRIVGFRNLKL--GLRLLLSLRSTNGQL 750
+ I ++ +++ IQ I +N H NL+L G + LRS +G+L
Sbjct: 712 ETISDDLKDQEDSHEIQLRFIYGENTDMNHN----PNLELERGQQSFYPLRSISGKL 764
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 125/555 (22%), Positives = 246/555 (44%), Gaps = 94/555 (16%)
Query: 29 SLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
+L+ C H K + + + +H +++VTG+ +S +A ++++YA+ A VF++
Sbjct: 16 ALVHCTRH-----KQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDS 70
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL-----GVLGDGFTFPLVIRACK 143
+ WN ++ + +L + R+L ++ + T V A
Sbjct: 71 IN---NKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAAS 127
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
+ R G+ H ++ +V + L+ MY K G + ++ LFD++
Sbjct: 128 TLSDSRA----GRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMP----- 178
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
E N V+W +++S +A +E +LF +M
Sbjct: 179 ------------------------------ERNAVSWATMISGYASQELADEAFELFKLM 208
Query: 264 R--KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
R ++G VLS + G+ +H +K N L+C+
Sbjct: 209 RHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMK----------NGLVCI----- 253
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
V VA NAL+T Y + G ++A++ F +L G N I+WS
Sbjct: 254 -VSVA---------------NALVTMYVKCGSLEDALKTF----ELSGNK----NSITWS 289
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
A++ FA G ++AL LF M + + + T+ G+++ C+++ A+ GR++HG+ +++
Sbjct: 290 AMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKL 349
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
+ V + L++MY KCG + + FE I++ D++ W S+I+GY NG E AL +
Sbjct: 350 GYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLY 409
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
+M G P+ + +VL ACS+ +++G+++ +++ + ++ + + + +
Sbjct: 410 GKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIK-YNFSLEIPIGSALSAMYAK 468
Query: 562 AGLLQEASDIVKNMP 576
G L + I MP
Sbjct: 469 CGSLDDGYRIFWRMP 483
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 7/173 (4%)
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
C L GR +H ++ + + N L+N+Y KC + +LVF+ I KD+++W
Sbjct: 20 CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSW 79
Query: 482 NSMISGYGMNGLGENALAT---FEEMIEA--GFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
N +I+ + +L F +++ A P+ V +A S GR+
Sbjct: 80 NCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAH 139
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ V+ + + ++++ + GL+ EA D+ MP E NA W T+++
Sbjct: 140 ALAVKT-ACSHDVFAASSLLNMYCKTGLVFEARDLFDEMP-ERNAVSWATMIS 190
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/652 (29%), Positives = 333/652 (51%), Gaps = 82/652 (12%)
Query: 54 LIVTGANASAFLAARVLSIYAR---------FGRLFDARNVFETAPFDCKSSSLLWNSIL 104
+++TG F ++R+++ A LF+ RN ++ WN +
Sbjct: 1 MVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRN----------PNTFSWNVAI 50
Query: 105 RVNVSNGLYENALKLYVKMRKL-GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
R + + A+ LY ++ + G D +T+PL+ +AC + R G + HVL
Sbjct: 51 RGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRM----GSEILGHVL 106
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
+GF ++ + N +I + G + + K+FDK V++
Sbjct: 107 HLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRD---------------------- 144
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
V+W S+++ + R G E ++ + M+ GI+ + V+S CA
Sbjct: 145 -------------LVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCA 191
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
L +G+ H ++ + G + V + NAL+ +Y K G+++ A+ LF + K +VSW
Sbjct: 192 QLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTT 251
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+ L DE M +V+ W+A+IG + RG+EAL LF +M
Sbjct: 252 M--------LFDE---------------MPDKDVVPWNAMIGGYVHANRGKEALALFNEM 288
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
Q + + VT+ LS C++ AL++G IH ++ + ++ N+ + L++MY KCG +
Sbjct: 289 QAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKI 348
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
+ VF+++ ++ +TW ++ISG ++G A+A F EMI+ PD V F+ +LSAC
Sbjct: 349 TKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSAC 408
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
H GLV EGR+ F M +F + P+++HY+CMVDLLGRAGLL+EA +++K+MP+E +A V
Sbjct: 409 CHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVV 468
Query: 584 WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKT 643
WG L +CR+H N + E AS++ + +G Y+LL+N+Y + W++A K R +
Sbjct: 469 WGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQ 528
Query: 644 KGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
+G++K G S IEV ++ F + + + E L +L Q+E C P
Sbjct: 529 RGVEKTPGCSSIEVNGIVYEFIVRDKSHPQSEQIYECLIQLTRQLELVECTP 580
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 198/657 (30%), Positives = 330/657 (50%), Gaps = 85/657 (12%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
QVH ++ G + + ++ ++++Y + G + AR +F+ S + WNS++
Sbjct: 219 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV---KSVVTWNSMISGYA 275
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+NGL AL ++ MR V +F +I+ C + RF + +H V++ GF
Sbjct: 276 ANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFT----EQLHCSVVKYGFV 331
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+ +I L+ Y+K M D+ +LF +
Sbjct: 332 FDQNIRTALMVAYSKCMAMLDALRLFKET------------------------------- 360
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
G N V+WT+++S + EE + LF M+++G+ +V+L+ ++
Sbjct: 361 ---GFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPS 417
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+H V+K +E V AL+ Y K G V
Sbjct: 418 E----VHAQVVKTNYERSSTVGTALLDAYVKLGKV------------------------- 448
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
DEA +VFS ++ D +++WSA++ +A G E A+ +F ++ V
Sbjct: 449 ------DEAAKVFSGIDNKD--------IVAWSAMLAGYAQAGETEAAIKIFSELTKGGV 494
Query: 409 VANSVTISGLLSVCA-ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
N T S +L+VCA +A++ G++ HG ++ ++ ++ V + LL MY K G +E
Sbjct: 495 KPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAE 554
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
VF++ +KDL++WNSMISGY +G AL F+EM + K D V F+ V +AC+HAG
Sbjct: 555 EVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAG 614
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
LV EG + FD+MVR+ +I P EH +CMVDL RAG L++A ++ NMP + +W T+
Sbjct: 615 LVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTI 674
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
L +CR+HK T++ A +I +I E + +Y+LLSN+YA SG W++ AKVR + +K
Sbjct: 675 LAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVK 734
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
K G SWIEVK K + F +G+ + LE+L+ ++++ G PD +L ++
Sbjct: 735 KEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDI 791
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 135/581 (23%), Positives = 258/581 (44%), Gaps = 104/581 (17%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
A RL+ A N+F+ +P + S + S+L +G + A +L++ ++ LG+ D
Sbjct: 42 ASSSRLYYAHNLFDKSPDRDRES---YTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCS 98
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
F V++ + F G+ +H ++ GF +V + L+ Y K D +
Sbjct: 99 IFSSVLKVSATLCDELF----GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNV 154
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FD+++ +N ++W + SG+A N + L LF RM+ EG +PN T+
Sbjct: 155 FDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTF------------- 201
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
A L V A+ G +H V+K G + + V N+L
Sbjct: 202 ----------------------AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSL 239
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF------------ 361
I +Y K G+V+ A+ LF + E K++V+WN++I+ YA GL EA+ +F
Sbjct: 240 INLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSE 299
Query: 362 ----------SQLEKLDGGSMERPNVISW---------SAVIGAFASNGRGEEALDLFRK 402
+ L++L +V+ + +A++ A++ +AL LF++
Sbjct: 300 SSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKE 359
Query: 403 MQ-LAKVVANSVTISGLLSVCAESAALNI---------------------------GREI 434
L VV+ + ISG L + A+ + E+
Sbjct: 360 TGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEV 419
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
H VV+ + ++ V LL+ Y+K G ++E VF I+ KD++ W++M++GY G
Sbjct: 420 HAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGET 479
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSAC-SHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
E A+ F E+ + G KP+ F ++L+ C + + +G++ ++ R++ + +
Sbjct: 480 EAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKS-RLDSSLCVSS 538
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
++ + + G ++ A ++ K E + W ++++ H
Sbjct: 539 ALLTMYAKKGHIESAEEVFKRQ-REKDLVSWNSMISGYAQH 578
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 200/437 (45%), Gaps = 84/437 (19%)
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
++TSLL +R GR +E LF ++ G+E+ + VL V A L + G+ +H
Sbjct: 64 SYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQC 123
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
IK GF D V V +L+ Y K + K +N+F E++E+N+V+W LI+ YA L +E +
Sbjct: 124 IKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVL 183
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
+F +++ D G+ +PN +++A +G A G G L
Sbjct: 184 TLFMRMQ--DEGT--QPNSFTFAAALGVLAEEGVGGRGL--------------------- 218
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
++H VV+ ++K I V N L+N+Y+KCG + + ++F++ E K +
Sbjct: 219 --------------QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV 264
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS-----------HAG 527
+TWNSMISGY NGL AL F M + +F +++ C+ H
Sbjct: 265 VTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCS 324
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDL-----------LGR--------AGLLQ-- 566
+V G +FD +R + + + CM L LG +G LQ
Sbjct: 325 VVKYG-FVFDQNIRTALM---VAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQND 380
Query: 567 ---EASDIVKNMP---MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML 620
EA + M + PN + + +L + + ++V + + + T G+ +L
Sbjct: 381 GKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYER-SSTVGTALL 439
Query: 621 LSNIYAASGRWEDAAKV 637
+ Y G+ ++AAKV
Sbjct: 440 --DAYVKLGKVDEAAKV 454
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 34 FDHLLQQCK----TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA 89
F +L C ++ Q KQ H I + ++S +++ +L++YA+ G + A VF+
Sbjct: 501 FSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQ 560
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
+ + WNS++ +G AL ++ +M+K V D TF V AC G
Sbjct: 561 R---EKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVE 617
Query: 150 F-RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
F +V + + + N +V+ +Y++ GQ+ + K+ D
Sbjct: 618 EGEKYFDIMVRDCKIAPTKEHNSCMVD----LYSRAGQLEKAMKVID 660
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 161/452 (35%), Positives = 261/452 (57%), Gaps = 8/452 (1%)
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
PN + +L+ + E + + + G+ ++ CA L MG
Sbjct: 80 PNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQT 139
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
HG IK GFE +V+N+L+ +Y GD+ A+++F + ++VSW +I Y G
Sbjct: 140 HGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDA 199
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
A E+F + M N+++WS +I +A N E+A++ F +Q VVAN
Sbjct: 200 KSARELFDR--------MPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETV 251
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
+ G++S CA AL +G + H +V+R ++ N+++ +++MY +CG +E+ +VFEQ+
Sbjct: 252 MVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLP 311
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
+KD++ W ++I+G M+G E AL F EM + GF P + F AVL+ACSHAG+V G
Sbjct: 312 EKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGMVERGLE 371
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
IF+ M R+ +EP++EHY CMVDLLGRAG L++A V MP++PNA +W LL +CR+H
Sbjct: 372 IFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALLGACRIH 431
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
KN +V E + + + E +G Y+LLSNIYA + +W+D +R K KG++K G S
Sbjct: 432 KNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGVRKPPGYSL 491
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELAL 686
IE+ K+H F+ G+ +++ + + E++ L
Sbjct: 492 IEIDGKVHEFTIGDKTHPEIEKIERIWEDIIL 523
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 189/379 (49%), Gaps = 35/379 (9%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSI----------YA-RFGRLFDARNV 85
LL+ C LK +H ++ T F A+R+++ YA R N+
Sbjct: 23 LLECCSNARDLKIIHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQNPNL 82
Query: 86 FETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
F ++N+++R ++ EN+ Y+K + G+L D T P +++AC +
Sbjct: 83 F------------IYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQL 130
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
+ G H ++ GF+ + ++ N L+ MYA +G ++ + +F ++ + +SW
Sbjct: 131 ENA----PMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSW 186
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
M +G+ D A ELF RM E N VTW++++S +AR E+ ++ F+ ++
Sbjct: 187 TCMIAGYHRCGDAKSARELFDRMP----ERNLVTWSTMISGYARNNCFEKAVETFEALQA 242
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
G+ + V+S CA L A MG+ H +V++ + + A++ +Y + G+V+
Sbjct: 243 EGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEK 302
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A +F ++ EK+++ W ALI A G ++A+ FS++ K G + P I+++AV+
Sbjct: 303 AVMVFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAK--KGFV--PRDITFTAVLT 358
Query: 386 AFASNGRGEEALDLFRKMQ 404
A + G E L++F M+
Sbjct: 359 ACSHAGMVERGLEIFESMK 377
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 115/263 (43%), Gaps = 33/263 (12%)
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
++ PN+ ++A+I +++ E + + K ++ +++T L+ CA+
Sbjct: 74 ASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENA 133
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS----- 483
+G + HG ++ ++ VQN L++MY G + VF+++ + D+++W
Sbjct: 134 PMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGY 193
Query: 484 --------------------------MISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
MISGY N E A+ TFE + G + V
Sbjct: 194 HRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMV 253
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
V+S+C+H G + G + + ++R ++ + +VD+ R G +++A + + +P
Sbjct: 254 GVISSCAHLGALAMGEKAHEYVMRN-KLSLNLILGTAVVDMYARCGNVEKAVMVFEQLP- 311
Query: 578 EPNAYVWGTLLNSCRMHKNTDVA 600
E + W L+ MH + A
Sbjct: 312 EKDVLCWTALIAGLAMHGYAEKA 334
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 103/198 (52%), Gaps = 8/198 (4%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y R G AR +F+ P + + + W++++ N +E A++ + ++ GV+ +
Sbjct: 193 YHRCGDAKSARELFDRMP---ERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANE 249
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
VI +C +G+ + G+ H +V++ N+ + ++ MYA+ G + +
Sbjct: 250 TVMVGVISSCAHLGAL----AMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVM 305
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+F+++ K+ + W + +G A++ + AL F M +G P +T+T++L++ + G
Sbjct: 306 VFEQLPEKDVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHAGM 365
Query: 253 LEETMDLFD-MMRKRGIE 269
+E +++F+ M R G+E
Sbjct: 366 VERGLEIFESMKRDHGVE 383
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 93/235 (39%), Gaps = 44/235 (18%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK--CGCLEEGHLVFEQIEK 475
LL C+ + L I IH H++R + ++ + L+ + L V QI+
Sbjct: 23 LLECCSNARDLKI---IHAHMLRTHLFFDVFAASRLIAFCIDSTTNLLHYAIRVASQIQN 79
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH-----AGLVN 530
+L +N++I G + EN+ + + + G PD + ++ AC+ G+
Sbjct: 80 PNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQT 139
Query: 531 EGRRIFDMMVREFRIEPQMEH-------------------------YACMVDLLGRAGLL 565
G+ I ++F ++ + H + CM+ R G
Sbjct: 140 HGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDA 199
Query: 566 QEASDIVKNMPMEPNAYVWGTLL-----NSCRMHKNTDVAEAMASQIFGLITETT 615
+ A ++ MP E N W T++ N+C K + EA+ ++ G++ T
Sbjct: 200 KSARELFDRMP-ERNLVTWSTMISGYARNNC-FEKAVETFEALQAE--GVVANET 250
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 185/591 (31%), Positives = 300/591 (50%), Gaps = 80/591 (13%)
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+S WN LR L+ ++ LY M + G D F+FP ++++C S S G
Sbjct: 14 ASTSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSC---ASLSLPVS-G 69
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY--ISWNMMFSGFA 213
Q +H HV++ G + ++ LI MY K G + D+ K+F++ + + +N + SG+
Sbjct: 70 QQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYT 129
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
N A +F+R M++ G+ V +
Sbjct: 130 ANSKVSDAAFMFRR-----------------------------------MKETGVSVDSV 154
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
I ++ +C +G+ +HG +KGG V V N+ I +Y K G V+ + LF E+
Sbjct: 155 TILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEM 214
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
K + I+W+AVI ++ NG
Sbjct: 215 PVKGL---------------------------------------ITWNAVISGYSQNGLA 235
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
+ L+LF +M+ + V + T+ +LS CA A IG+E+ V N+ + N L
Sbjct: 236 YDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNAL 295
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY +CG L + VF+ + K L++W +MI YGM+G+GE L F++MI+ G +PDG
Sbjct: 296 ISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDG 355
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
FV VLSACSH+GL ++G +F M RE+++EP EHY+C+VDLLGRAG L EA + +
Sbjct: 356 AVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFID 415
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
+MP+EP+ VWG LL +C++HKN D+AE +++ G Y+L+SNIY+ S E
Sbjct: 416 SMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEG 475
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
++R+ + + +K G S++E K K+H+F +G+ + V +L+EL
Sbjct: 476 IWRIRVMMRERAFRKKPGYSYVEHKGKVHLFLAGDRSHEQTEEVHRMLDEL 526
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 177/376 (47%), Gaps = 51/376 (13%)
Query: 34 FDHLLQQCKTIH---QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C ++ +Q+H +I G A F+ ++S+Y + G + DAR VFE P
Sbjct: 53 FPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENP 112
Query: 91 FDCKSSSL--LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
SS L +N+++ +N +A ++ +M++ GV D T ++ C +
Sbjct: 113 ---HSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLC----TV 165
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
G+ +H ++ G V ++N I MY K G + +LFD++ VK I+WN +
Sbjct: 166 PEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAV 225
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
SG++ N LELF++M+ G+ P+ T S+LSS
Sbjct: 226 ISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSS---------------------- 263
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
CA L A +G+ + V GF VF+ NALI +Y + G++ A+
Sbjct: 264 -------------CAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARA 310
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+F + K++VSW A+I Y G+ + + +F + K RP+ + V+ A +
Sbjct: 311 VFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRG----IRPDGAVFVMVLSACS 366
Query: 389 SNGRGEEALDLFRKMQ 404
+G ++ L+LFR M+
Sbjct: 367 HSGLTDKGLELFRAMK 382
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 208/753 (27%), Positives = 371/753 (49%), Gaps = 111/753 (14%)
Query: 32 DCFDHLLQQC---KTIHQLKQVHNQLIVTGA--NASAFLAARVLSIYARFGRLFDARNVF 86
+ + LLQ C + +H +Q+H Q++ GA + ++ +++ YA+ + ++F
Sbjct: 11 EVYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLF 70
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+ W +++ +N G Y+ AL + +M++ G+L D F P V++AC +
Sbjct: 71 RRVRL---KNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLE 127
Query: 147 SFRFRFSFGQIVHN-----HVLQMGF------------QGNVHIVNELIGMYAKMGQMSD 189
R G++VH +V +M Q N N +I Y + G +
Sbjct: 128 WIRI----GKVVHGLVSCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEE 183
Query: 190 SFKLFDKVRVKNYISWNMMFSGF-----------------ALNFDC-------------- 218
+ ++F ++R + + S F A+ C
Sbjct: 184 AIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLIN 243
Query: 219 --------DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
+ A +F RM LE + VTW L+S + + G +++ +++ +MR +
Sbjct: 244 FYSKVGLIEDAESVFSRM----LEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRF 299
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY------------------------ 306
+ +A ++S AD+ +GK H + I+ E
Sbjct: 300 DSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVF 359
Query: 307 -------VFVKNALICVYGKHGDVKVAQNLFSEIE----EKNIVSWNALITSYAEAGLCD 355
+ + N ++ + + G A NLF +++ N++SWN+LI + +G +
Sbjct: 360 NSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVN 419
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
EA ++F Q++ L +PN+++W+ +I A +G G EA+ F++MQ A V N V+I
Sbjct: 420 EAKDMFLQMQSLG----VQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSI 475
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
G+L C A+L IGR +HG+++R S+ +I + L++MY KCG ++ VF+ I
Sbjct: 476 IGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPD 535
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
K+L +N+MISG+ ++G ALA + + E G KPD + F L ACSHA +V+EG +
Sbjct: 536 KELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLEL 595
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
F MV I P +EHY CMV LL R G L EA ++ MP +P+ + G+LL +CR H
Sbjct: 596 FVDMVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACREHN 655
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
++ E +++Q+ L + +G+Y+ +SN YAA+GRW++ KVR K +GL+K+ G SWI
Sbjct: 656 KIELEEYLSNQLLKLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIPGCSWI 715
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
+V ++++F +G+ + + + L L +++
Sbjct: 716 QVGEELNVFVAGDKSHPETEEIYTTLALLLMEI 748
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 132/310 (42%), Gaps = 50/310 (16%)
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG--FEDYVFVKNALICVYGKH 320
M + + +G E +L C A H G+ IH ++K G F +++ L+ Y K
Sbjct: 1 MELKNLRIGPEVYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKC 60
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE--------------- 365
+ + + +LF + KN+ SW A+I G EA+ F +++
Sbjct: 61 DNPEASNSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVL 120
Query: 366 KLDGG---------------------------------SMERPNVISWSAVIGAFASNGR 392
K GG M + N ++W+++I + NG
Sbjct: 121 KACGGLEWIRIGKVVHGLVSCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGL 180
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
EEA+++F +M+ V VT+S LS A AL G++ H V + + +
Sbjct: 181 NEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSS 240
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L+N Y K G +E+ VF ++ +KD++TWN +ISGY G + AL M + D
Sbjct: 241 LINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFD 300
Query: 513 GVAFVAVLSA 522
V ++SA
Sbjct: 301 SVTLATLMSA 310
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/643 (30%), Positives = 337/643 (52%), Gaps = 93/643 (14%)
Query: 34 FDHLLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
FD +L C + I Q+H ++V+G + + +LS+Y++ GR DA +F
Sbjct: 238 FDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMS 297
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP-LVIRACKFMGSFR 149
++ ++ WN ++ V +GL E +L + +M GVL D TF L+ KF
Sbjct: 298 ---RADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFEN--- 351
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
+ + +H ++++ ++ + + LI Y K +S + K+F + + + + M
Sbjct: 352 --LEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMI 409
Query: 210 SGF---ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
SG+ LN D ALE+F+ + + PN +T S
Sbjct: 410 SGYLHNGLNID---ALEMFRWLVKVKISPNEITLVS------------------------ 442
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
+L V L A +G+ +HGF+IK GF++ + A+I +Y K G + +A
Sbjct: 443 -----------ILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLA 491
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
E+F +L K D ++SW+++I
Sbjct: 492 Y-------------------------------EIFGRLSKRD--------IVSWNSMITR 512
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
A + A+D+FR+M ++ + + V+IS LS CA + + G+ IHG +++ S+ +
Sbjct: 513 CAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALD 572
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+ ++ L++MY KCG L+ VF+ +++K++++WNS+I+ YG +G +++L F EM+E
Sbjct: 573 VYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVE 632
Query: 507 -AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
+G +PD + F+ ++S C H G V+EG R F M +++ I+PQ EHYAC+VDL GRAG L
Sbjct: 633 KSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRL 692
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
EA + VK+MP P+A VWGTLL + R+HKN ++A+ +S++ L +G Y+L+SN +
Sbjct: 693 SEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDPWNSGYYVLISNAH 752
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
A +G WE KVR K + ++K+ G SWIE+ + H+F SG+
Sbjct: 753 ANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFVSGD 795
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 151/597 (25%), Positives = 278/597 (46%), Gaps = 67/597 (11%)
Query: 37 LLQQCKTI---HQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LLQ C + Q KQVH +IV + ++ R+L +YA G + +F D
Sbjct: 37 LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYR--LDS 94
Query: 94 KSSSL-LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ SS+ WNSI+ V GL AL Y KM GV D TFP +++AC + +F+
Sbjct: 95 RLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI- 153
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
+ + + V +G N + + LI Y + G++ + KLFD+V K+ + WN+M +G+
Sbjct: 154 ---EFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGY 210
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTW-------------------------------- 240
A D ++ F M ++ + PN VT+
Sbjct: 211 AKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEG 270
Query: 241 ---TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
SLLS +++CGR ++ + LF MM + A+ + + + + M + + F
Sbjct: 271 SIKNSLLSMYSKCGRFDDAIKLFRMMSR------ADTVTWNCMISGYVQSGLMEESLIFF 324
Query: 298 --VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK----NIVSWNALITSYAEA 351
+I G ++L+ K +++ + + I +I +ALI +Y +
Sbjct: 325 YEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKC 384
Query: 352 GLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVAN 411
A ++FSQ +D V+ ++A+I + NG +AL++FR + K+ N
Sbjct: 385 RGVSMAQKIFSQCNSVD--------VVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPN 436
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
+T+ +L V AL +GRE+HG +++ + + +++MY KCG + + +F
Sbjct: 437 EITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFG 496
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
++ K+D+++WNSMI+ + A+ F +M +G D V+ A LSAC++ +
Sbjct: 497 RLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESF 556
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
G+ I M++ + + + ++D+ + G L+ A ++ M E N W +++
Sbjct: 557 GKAIHGFMIKH-SLALDVYSESTLIDMYAKCGNLKAAMNVFDTMK-EKNIVSWNSII 611
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 146/338 (43%), Gaps = 64/338 (18%)
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
E ++++L C++L GK +H FVI + ++ +Y G
Sbjct: 28 ETLPRRLSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGK 87
Query: 329 LFSEIEEK--NIVSWNALITSYAEAGLCDEAVEVFSQ----------------------L 364
+F ++ + +I WN++I+S+ GL ++A+ + + L
Sbjct: 88 MFYRLDSRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL 147
Query: 365 EKLDGGSMERPNVISW---------SAVIGAFASNGRGEEALDLFRKM------------ 403
+ G V S S++I A+ G+ + A LF ++
Sbjct: 148 KNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVML 207
Query: 404 -------------------QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
++ ++ N+VT +LSVCA +++G ++HG VV ++
Sbjct: 208 NGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLD 267
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
++N LL+MY KCG ++ +F + + D +TWN MISGY +GL E +L F EM
Sbjct: 268 FEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEM 327
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
I +G PD + F ++L + S + R+I ++R
Sbjct: 328 ISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRH 365
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/553 (32%), Positives = 298/553 (53%), Gaps = 43/553 (7%)
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
S G+ +H+ ++ G + I N L+ +Y+K GQ+ + LF + KN +S N++ +G
Sbjct: 68 LSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILING 127
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+ + D A ++F M E N TW ++++ + EE + LF M + G
Sbjct: 128 YFRSGDWVTARKMFDEMP----ERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPD 183
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
A+ VL CA L A G+ +HG+V K GFE + V ++L +Y K G + + L
Sbjct: 184 EFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIR 243
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+M NV++W+ +I A NG
Sbjct: 244 ---------------------------------------AMPSQNVVAWNTLIAGRAQNG 264
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
EE LD + M++A + +T ++S C+E A L G++IH V++ + + V +
Sbjct: 265 YPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVIS 324
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++MY +CGCLE VF + E D++ W+SMI+ YG +G G A+ F +M + +
Sbjct: 325 SLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEA 384
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
+ V F+++L ACSH GL +G + FD+MV ++ ++P++EHY CMVDLLGR G ++EA +
Sbjct: 385 NDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEAL 444
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
+++MP++ + W TLL++C++HK T++A ++ ++F L Y+LLSNI+A+ RW
Sbjct: 445 IRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRW 504
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
+D + VR + + + LKK G SW+EVK +IH F G+ + L EL +M+ +
Sbjct: 505 DDVSDVRKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKR 564
Query: 692 GCVPDNDIILWEM 704
G VPD D +L +M
Sbjct: 565 GYVPDIDSVLHDM 577
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 136/264 (51%), Gaps = 8/264 (3%)
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
+L C + +GK +H +I G F+ N L+ +Y K G + A LF + KN
Sbjct: 58 LLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKN 117
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
I+S N LI Y +G A ++F + M NV +W+A++ EE L
Sbjct: 118 IMSCNILINGYFRSGDWVTARKMFDE--------MPERNVATWNAMVAGLIQFEFNEEGL 169
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
LF +M + + + +L CA AL GR++HG+V + N++V + L +MY
Sbjct: 170 GLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMY 229
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
MKCG L EG + + ++++ WN++I+G NG E L + M AGF+PD + FV
Sbjct: 230 MKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFV 289
Query: 518 AVLSACSHAGLVNEGRRIFDMMVR 541
+V+S+CS + +G++I +++
Sbjct: 290 SVISSCSELATLGQGQQIHAEVIK 313
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 198/471 (42%), Gaps = 105/471 (22%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F HLLQ C + + L KQ+H+ +I +G ++ F++ +L++Y++ G+L A +F P
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 91 --------------------------FD--CKSSSLLWNSILRVNVSNGLYENALKLYVK 122
FD + + WN+++ + E L L+ +
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M +LG L D F V+R C + + G+ VH +V + GF+ N+ +V+ L MY
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRAL----VAGRQVHGYVRKCGFEFNLVVVSSLAHMYM 230
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K G + + +L + +N V W +
Sbjct: 231 KCGSLGEGERLIRAMPSQN-----------------------------------VVAWNT 255
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
L++ A+ G EE +D ++MM+ G V+S C++LA G+ IH VIK G
Sbjct: 256 LIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAG 315
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
V V ++LI +Y + G ++ + +F E E ++V W+++I +Y G EA+++F+
Sbjct: 316 ASLIVSVISSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFN 375
Query: 363 QL--EKLDGGSME------------------------------RPNVISWSAVIGAFASN 390
Q+ EKL+ + +P + ++ ++
Sbjct: 376 QMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRY 435
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
G EEA L R M V A+ +T LLS C + R I V R+
Sbjct: 436 GSVEEAEALIRSM---PVKADVITWKTLLSACKIHKKTEMARRISEEVFRL 483
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 37/233 (15%)
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
S G ++A D F + + + S LL C +L++G+++H ++ + +
Sbjct: 31 LCSKGHLKQAFDRFS----SHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSD 86
Query: 447 ILVQNGLLNMYMKCGCLE---------------------EGHL----------VFEQIEK 475
+ N LLN+Y KCG L+ G+ +F+++ +
Sbjct: 87 KFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPE 146
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
+++ TWN+M++G E L F M E GF PD A +VL C+ + GR++
Sbjct: 147 RNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQV 206
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
VR+ E + + + + + G L E +++ MP + N W TL+
Sbjct: 207 HG-YVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQ-NVVAWNTLI 257
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/662 (28%), Positives = 333/662 (50%), Gaps = 56/662 (8%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+L Y++ G L + FE P + WN ++ +GL A+K Y M K
Sbjct: 75 LLLAYSKSGHLSEMERTFEKLP---DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMK--D 129
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
T ++ K + S S G+ +H V+++GF+ + + + L+ MY+K+G +S
Sbjct: 130 FSSNLTRVTLMTMLK-LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCIS 188
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
D+ K+F + +N + +N + G + AL+LF+ G+E + V+W++++ A
Sbjct: 189 DAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFR-----GMEKDSVSWSAMIKGLA 243
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ G +E ++ F M+ G+++ VL C L A + G+ IH +I+ +D+++
Sbjct: 244 QNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIY 303
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V +ALI +Y K + A+ +F +++K
Sbjct: 304 VGSALIDMYCKCKCLHYAKTVFDRMKQK-------------------------------- 331
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
NV+SW+A++ + GR EA+ +F MQ + + + T+ +S CA ++L
Sbjct: 332 -------NVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSL 384
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
G + HG + + I V N L+ +Y KCG +++ +F ++ +D ++W +M+S Y
Sbjct: 385 EEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAY 444
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
G A+ F++M++ G KPDGV V+SACS AGLV +G+R F++M+ E+ I P
Sbjct: 445 AQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPS 504
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
HY+CM+DL R+G ++EA + MP P+A W TLL++CR N ++ + A +
Sbjct: 505 NGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLI 564
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L Y LLS+IYA+ G+W+ A++R K K ++K GQSWI+ K K+H FS+ +
Sbjct: 565 ELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADD 624
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHRIV 728
+ LEEL ++ + G PD + +V+ +I+ N S+ +
Sbjct: 625 ESSPYSDQIYAKLEELYQKIIDNGYKPDTSFV------HHDVEEAVKIKMLNCHSERLAI 678
Query: 729 GF 730
F
Sbjct: 679 AF 680
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 115/233 (49%), Gaps = 10/233 (4%)
Query: 34 FDHLLQQCK---TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L C I+ +Q+H +I T ++ + ++ +Y + L A+ VF+
Sbjct: 270 FGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 329
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + W +++ G A+K+++ M++ G+ D +T I AC + S
Sbjct: 330 ---QKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLE- 385
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G H + G + + N L+ +Y K G + DS +LF+++ V++ +SW M S
Sbjct: 386 ---EGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVS 442
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
+A A++LF +M GL+P+ VT T ++S+ +R G +E+ F++M
Sbjct: 443 AYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELM 495
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
IHG+++R + + N +++ Y VF+ I + +L +WN+++ Y +G
Sbjct: 25 IHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNLFSWNNLLLAYSKSGH 84
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
TFE++ + DGV + ++ S +GLV + ++ M+++F
Sbjct: 85 LSEMERTFEKLPDR----DGVTWNVLIEGYSLSGLVGAAVKAYNTMMKDF 130
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 195/693 (28%), Positives = 342/693 (49%), Gaps = 91/693 (13%)
Query: 15 SNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGA-NASAFLAARVLSIY 73
++P RP S F L++ Q+H + G + + F + ++ Y
Sbjct: 62 AHPLRPDSFT---------FPPLVRAAPGPASAAQLHACALRLGLLHPNVFASGSLVHAY 112
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
RFGR+ +A VF+ P + WN++L N +A+ L +M GV GD
Sbjct: 113 LRFGRVAEAYRVFDEMP---ERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAV 169
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
T V+ C +G + ++H + ++ G G + + N LI +Y K+G ++++ +
Sbjct: 170 TLSSVLPMCVVLGD----RALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWV 225
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
F + +++ ++WN + S A+ELF M G+ P+ +T SL S+ A+CG
Sbjct: 226 FGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDE 285
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
+ +R+RG +VG + NA+
Sbjct: 286 LGAKSVHCYVRRRGWDVGD----------------------------------IIAGNAM 311
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ +Y K + AQ +F + ++++VSWN LIT Y + GL +EA+ +++ + +G
Sbjct: 312 VDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEG---L 368
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
+P ++ +V+ A++ G L G
Sbjct: 369 KPIQGTFVSVLPAYSYLG-----------------------------------GLQQGMR 393
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+H ++ +N ++ V L+++Y KCG L E +FE + ++ WN++I+G G++G
Sbjct: 394 MHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGH 453
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
G AL+ F +M + KPD V FV++L+ACSHAGLV++GR FD+M + I P +HY
Sbjct: 454 GAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYT 513
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
CMVD+LGRAG L EA + +++MP++P++ VWG LL +CR+H N ++ + + +F L E
Sbjct: 514 CMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPE 573
Query: 614 TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSD 673
G Y+L+SN+YA G+W+ VR + + L+K G S +EVK + +F SG +
Sbjct: 574 NVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPH 633
Query: 674 LKN--VCEVLEELALQMENKGCVPDNDIILWEM 704
++ + L +L +M++ G VPD +L ++
Sbjct: 634 PQHEEIQRGLHDLLAKMKSAGYVPDYSFVLQDV 666
>gi|255551609|ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543938|gb|EEF45464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 191/616 (31%), Positives = 314/616 (50%), Gaps = 21/616 (3%)
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
G + AR +F+ P ++ WNS++ G ++ AL ++ +MR D FTF
Sbjct: 19 GYIVHARKLFDEMP---NRDTVAWNSMITSYSQLGFHQEALSIFYQMRNTNTKPDHFTFT 75
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
+ AC GSF FG +H V+ +G+ ++ + N LI MY K + ++F +
Sbjct: 76 ATLSACAGAGSF----PFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDAFSAGQVFKE 131
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
+ N +SW + + + A E+F M + E + W ++++ R G +E
Sbjct: 132 MGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRK-FE---IAWNTMIAGLGRYGEIELC 187
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
+D+F MR+ +E + ++S C + G ++HG VI+ G+ + KN+++ +
Sbjct: 188 LDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAKNSILSL 247
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
Y K G + A + VSWNA+I +Y + G +EA +F S+ N
Sbjct: 248 YAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQ--------SLPEKN 299
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
++SW+++I +A NG GEEAL F M + + T +L C+ A L GR +HG
Sbjct: 300 IVSWTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHG 359
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
+R + + V NGL+NMY KCG L+ L F I KDL+++N+++ +G++G
Sbjct: 360 CAIRNGFSTYLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSFNALLFAFGLHGKASE 419
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
AL +E+M+ G KPD + F+ +L CSH+GL+ EGR F+ M + + +H ACMV
Sbjct: 420 ALQLYEDMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRLFFNSMKSVHGLSYEADHVACMV 479
Query: 557 DLLGRAGLLQEASDIVKNMPMEPN--AYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
D+LGR G L EA ++VK + A LL +C H ++ + + L
Sbjct: 480 DMLGRGGYLAEAKELVKKYSKTSDVEASSCEALLGACSAHGEVEMGTYLGKTLKTLEPNK 539
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
SY+L SN+Y G+W++A VR + +GLKK+ G SWIEV+ K+ F +GN L
Sbjct: 540 EISYVLQSNLYCVRGQWKEAEMVRKAMVDEGLKKMPGCSWIEVRNKVTAFVAGNHLYPYT 599
Query: 675 KNVCEVLEELALQMEN 690
+ + L L +M +
Sbjct: 600 DELYKTLYFLEFEMRS 615
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 180/406 (44%), Gaps = 76/406 (18%)
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA-LNFDCDGALELFK 226
+ N+ + I G + + KLFD++ ++ ++WN M + ++ L F + AL +F
Sbjct: 2 RSNLFRITSKISALGSSGYIVHARKLFDEMPNRDTVAWNSMITSYSQLGFHQE-ALSIFY 60
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
+M +P+ T+T+ LS CA
Sbjct: 61 QMRNTNTKPDHFTFTA-----------------------------------TLSACAGAG 85
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
+ G IH VI G+ + V N+LI +YGK D A +F E+ + N VSW +L+
Sbjct: 86 SFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDAFSAGQVFKEMGDINEVSWCSLLF 145
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
+Y +G EA E+F+ M R I+W+ +I G E LD+FR+M+ +
Sbjct: 146 AYTNSGRFSEASEIFNL--------MPRKFEIAWNTMIAGLGRYGEIELCLDMFREMRES 197
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM---------- 456
+ + T S L+S C ES G +HG V+R + + +N +L++
Sbjct: 198 LLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAKNSILSLYAKFGSLNDA 257
Query: 457 ---------------------YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
YMK G + E +L+F+ + +K++++W SMI+GY NG GE
Sbjct: 258 LKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVSWTSMITGYARNGYGE 317
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
AL F M F PD F AVL ACS ++ GR + +R
Sbjct: 318 EALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCAIR 363
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 179/387 (46%), Gaps = 46/387 (11%)
Query: 49 QVHNQLIVTGANAS----------------AFLAARV---------------LSIYARFG 77
++H +I+ G ++S AF A +V L Y G
Sbjct: 92 KIHALVIILGYHSSLPVNNSLIDMYGKCFDAFSAGQVFKEMGDINEVSWCSLLFAYTNSG 151
Query: 78 RLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPL 137
R +A +F P + + WN+++ G E L ++ +MR+ + D +T+
Sbjct: 152 RFSEASEIFNLMP---RKFEIAWNTMIAGLGRYGEIELCLDMFREMRESLLEPDQWTYSA 208
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
+I AC + F G ++H V++ G+ + N ++ +YAK G ++D+ K+ +
Sbjct: 209 LISAC----TESLEFLSGCMLHGLVIRSGWSSAMEAKNSILSLYAKFGSLNDALKVVEST 264
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
+SWN + + + A +F+ + E N V+WTS+++ +AR G EE +
Sbjct: 265 GRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLP----EKNIVSWTSMITGYARNGYGEEAL 320
Query: 258 DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
F M VL C+ LA G+++HG I+ GF Y++V N L+ +Y
Sbjct: 321 RFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCAIRNGFSTYLYVGNGLVNMY 380
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
K GD+ + F +I K++VS+NAL+ ++ G EA++++ + + G+ +P+
Sbjct: 381 AKCGDLDGSILAFHDICAKDLVSFNALLFAFGLHGKASEALQLYEDM--MTCGT--KPDK 436
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQ 404
+++ ++ + +G EE F M+
Sbjct: 437 MTFIGLLMTCSHSGLIEEGRLFFNSMK 463
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 139/312 (44%), Gaps = 55/312 (17%)
Query: 1 MRHSLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHL--LQQCKTIHQLKQVHNQLIVTG 58
MR SLL +P Q+ TY+ + C + L L C +H +I +G
Sbjct: 194 MRESLL-EPDQW------------TYSALISACTESLEFLSGC-------MLHGLVIRSG 233
Query: 59 ANASAFLAARVLSIYARFGRLFDARNVFET----------APFDC--------------- 93
+++ +LS+YA+FG L DA V E+ A D
Sbjct: 234 WSSAMEAKNSILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQ 293
Query: 94 ---KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + W S++ NG E AL+ +V M L D FTF V+ AC +
Sbjct: 294 SLPEKNIVSWTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAV--- 350
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G++VH ++ GF +++ N L+ MYAK G + S F + K+ +S+N +
Sbjct: 351 -LGHGRMVHGCAIRNGFSTYLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSFNALLF 409
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK-RGIE 269
F L+ AL+L++ M G +P+ +T+ LL + + G +EE F+ M+ G+
Sbjct: 410 AFGLHGKASEALQLYEDMMTCGTKPDKMTFIGLLMTCSHSGLIEEGRLFFNSMKSVHGLS 469
Query: 270 VGAEAIAVVLSV 281
A+ +A ++ +
Sbjct: 470 YEADHVACMVDM 481
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 272/470 (57%), Gaps = 11/470 (2%)
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFD--MMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
PN + +LL + ++ T+ F+ ++ VL CA LA G+
Sbjct: 88 PNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQ 147
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+H FV K G E +FV+N+L+ +Y K G +AQ LF E+ +++VSWN LI+ Y +G
Sbjct: 148 KVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSG 207
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL-AKVVAN 411
+ D+A VF G ME+ N++SWS +I +A N + +A++LFR+MQ + N
Sbjct: 208 MVDKARMVFD-------GMMEK-NLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPN 259
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
VT+ +LS CA AL++G+ IH + R + + + N L +MY KCGC+ E VF
Sbjct: 260 DVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFH 319
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
++ ++D+I+W+ +I G M G A F EMIE G +P+ ++F+ +L+AC+HAGLV++
Sbjct: 320 EMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDK 379
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
G FDMM + + I P++EHY C+VDLL RAG L +A ++ +MPM+PN VWG LL C
Sbjct: 380 GLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGC 439
Query: 592 RMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
R++K+ + E + +I L + +GS + L+N+YA+ GR +DAA R+ + K G
Sbjct: 440 RIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPG 499
Query: 652 QSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
SWIE+ ++ F G+S + ++ EL +M+ G P D+++
Sbjct: 500 CSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKMKVAGYKPKTDLVI 549
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 219/455 (48%), Gaps = 36/455 (7%)
Query: 36 HLLQQCKT---IHQLKQVHNQLIVTGANA--SAFLAARVLSIYARFGRLFDARNVFETAP 90
HLL +C T + QL ++ Q+I + + +A + + + + G L + +F
Sbjct: 26 HLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNH-- 83
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL--GVLGDGFTFPLVIRACKFMGSF 148
F + +N++L+ + + + + L D +TF V++AC +
Sbjct: 84 FLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLA-- 141
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
+ GQ VH V + G + N+ + N L+ +Y K+G + KLFD++ V++ +SWN +
Sbjct: 142 --QVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTL 199
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-G 267
SG+ + D A +F M +E N V+W++++S +AR + + ++LF M+ G
Sbjct: 200 ISGYCFSGMVDKARMVFDGM----MEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGG 255
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
+ + VLS CA L A +GK IH F+ + E +F+ NAL +Y K G V A+
Sbjct: 256 LAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAK 315
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+F E+ E++++SW+ +I A G +EA F+++ + DG PN IS+ ++ A
Sbjct: 316 GVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIE-DG---LEPNDISFMGLLTAC 371
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISG-LLSVCAESAALNIGREIHGHVVRVSMNKN 446
G ++ L+ F M + + G ++ + + + L+ + + + M N
Sbjct: 372 THAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESL---INSMPMQPN 428
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
++V LL GC +++ E+ + + W
Sbjct: 429 VIVWGALLG-----GC-----RIYKDAERGERVVW 453
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 147/318 (46%), Gaps = 20/318 (6%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S Y G + AR VF+ + + + W++++ N Y +A++L+ +M+ G
Sbjct: 199 LISGYCFSGMVDKARMVFDGM---MEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGG 255
Query: 129 LG-DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
L + T V+ AC +G+ G+ +H + + + + + N L MYAK G +
Sbjct: 256 LAPNDVTLVSVLSACAHLGAL----DLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCV 311
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
++ +F ++ ++ ISW+++ G A+ + A F M +GLEPN +++ LL++
Sbjct: 312 LEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTAC 371
Query: 248 ARCGRLEETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLAA-DHMGKVIHGFVIKGGFED 305
G +++ ++ FDMM + GI E V+ + + D +I+ ++
Sbjct: 372 THAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPN--- 428
Query: 306 YVFVKNALICVYGKHGDVKVAQNL---FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
V V AL+ + D + + + E++ + S L YA G D+A
Sbjct: 429 -VIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASC-- 485
Query: 363 QLEKLDGGSMERPNVISW 380
+L D SM+ P SW
Sbjct: 486 RLRMRDNKSMKTPGC-SW 502
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 182/562 (32%), Positives = 300/562 (53%), Gaps = 76/562 (13%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
GQ VH H+++ ++ V++ LI +Y K + D+ ++ D++
Sbjct: 29 GQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP---------------- 72
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
E N V+WT+++S +++ G E + LF M G
Sbjct: 73 -------------------ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFT 113
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
A VL+ C + +G+ IH VIK FE ++FV ++L+ +Y K
Sbjct: 114 FATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAK--------------- 158
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
AG EA VF L + D V+S +A+I +A G E
Sbjct: 159 ----------------AGKICEARRVFDGLPERD--------VVSCTAIISGYAQLGLDE 194
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
EALDLFR++Q + +N VT + +L+ + AAL+ GR++H HV+R + +++QN L+
Sbjct: 195 EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLI 254
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG-FKPDG 513
+MY KCG L +F+ + ++ +I+WN+M+ GY +GLG A+ F+ M E KPD
Sbjct: 255 DMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDS 314
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFR-IEPQMEHYACMVDLLGRAGLLQEASDIV 572
V F+AVLS CSH G+ + G IF MV + EP++EHY C+VDL GRAG ++EA + +
Sbjct: 315 VTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFI 374
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
K MP EP A +WG+LL +CR+H+N + E +A ++ + +E G+Y++LSN+YA++GRW+
Sbjct: 375 KKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWD 434
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
D VR K K + K G+SWIE+ + +H F + + + V + EL+++++ G
Sbjct: 435 DVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAG 494
Query: 693 CVPDNDIILWEMMGKKNVKRIQ 714
VP+ +L+++ ++ K +Q
Sbjct: 495 YVPELSCVLYDVDDEQKEKILQ 516
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 222/486 (45%), Gaps = 89/486 (18%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+D +L +C I + ++VH +I T +L R++ +Y + L DAR V + P
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + W +++ G AL L+V+M G + FTF V+ +C F+
Sbjct: 73 ---ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQL 129
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H+ V++ F+ ++ + + L+ MYAK G++ ++ ++FD + ++ +S + S
Sbjct: 130 ----GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIIS 185
Query: 211 GFA-LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
G+A L D + AL+LF+R++ EG+ N+VT+ S
Sbjct: 186 GYAQLGLD-EEALDLFRRLQREGMRSNYVTYAS--------------------------- 217
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
VL+ + LAA G+ +H V++ YV ++N+LI +Y K G + ++ +
Sbjct: 218 --------VLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRI 269
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK--------------LDG---GSM 372
F + E+ ++SWNA++ Y++ GL EAVE+F +++ L G G M
Sbjct: 270 FDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGM 329
Query: 373 E-----------------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
E P + + V+ F GR EEA + +KM A
Sbjct: 330 EDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAA---IW 386
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNK--NILVQNGLLNMYMKCGCLEEGHLVFEQI 473
LL C ++IG + ++ + N ++ L N+Y G ++ V E +
Sbjct: 387 GSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVI---LSNLYASAGRWDDVRTVRELM 443
Query: 474 EKKDLI 479
++K +I
Sbjct: 444 KEKAVI 449
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 86/159 (54%), Gaps = 1/159 (0%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
+L+ C A+ G+ +H H+++ + ++ L+ +Y KC CL + V +++ +++
Sbjct: 16 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 75
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+++W +MISGY G AL F EM+ +G P+ F VL++C+ + GR+I
Sbjct: 76 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 135
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
++++ E + + ++D+ +AG + EA + +P
Sbjct: 136 LVIKT-SFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 204/703 (29%), Positives = 346/703 (49%), Gaps = 105/703 (14%)
Query: 34 FDHLLQ-QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
F+HL Q + IH HN + N L A + F + NVF
Sbjct: 14 FNHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNP-NVF------ 66
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
++ S+LR + + +Y +M+ GV D F +P++I++ G F
Sbjct: 67 ------VFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAG-TGGIGF-- 117
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR-------------- 198
H HVL++G + + N +I MYA++G + + K+FD++
Sbjct: 118 ------HAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVS 171
Query: 199 -------------------VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
+N I+W M +G+A D + A F M E + V+
Sbjct: 172 GYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMP----ERSVVS 227
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
W ++LS +A+ G EE + LFD M GIE V+S C+ + + +
Sbjct: 228 WNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLH 287
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
+ + FV+ AL+ +Y K GD+ A+ LF+
Sbjct: 288 QKRIQLNCFVRTALLDMYAKFGDLDSARKLFN---------------------------- 319
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK-VVANSVTISGL 418
+M NV++W+++I +A NG+ A++LF++M AK + + VT+ +
Sbjct: 320 -----------TMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSV 368
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
+S C AL +G + + + +I N ++ MY +CG +E+ VF+++ +D+
Sbjct: 369 ISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDV 428
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
+++N++ISG+ +G G A+ M E G +PD V F+ VL+ACSHAGL+ EGR++F+
Sbjct: 429 VSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFES 488
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
+ +P ++HYACMVDLLGR G L++A ++ MPMEP+A V+G+LLN+ R+HK +
Sbjct: 489 IK-----DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVE 543
Query: 599 VAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
+ E A+++F L + +G+++LLSNIYA++GRW+D ++R + K G+KK G SW+E
Sbjct: 544 LGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYG 603
Query: 659 RKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
K+H F + ++ ++L EL +M G + D +L
Sbjct: 604 GKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVL 646
>gi|357517181|ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522901|gb|AET03355.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 633
Score = 327 bits (837), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 203/661 (30%), Positives = 341/661 (51%), Gaps = 62/661 (9%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
LL CKT+ Q Q++ +IVTG + + L+ + + YA +
Sbjct: 20 LLSSCKTMQQAHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSHTLFTQITNPD 79
Query: 97 SLLWNSILRVNVS-NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACK--FMGSFRFRFS 153
LWN+I++ + ++ L+ M VL D FTFP +++AC + + +F F
Sbjct: 80 IFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVLISAPQFGFQ 139
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
VH HVL+ GF +V + N L+ Y G + +++K+FD+ V++ +S+N M +GFA
Sbjct: 140 ----VHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFA 195
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
D G +F M + P+ T+ +LLS
Sbjct: 196 RKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSG--------------------------- 228
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIK--GGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
C+ L +G+ +HG V + G F V + N L+ +Y K G + +A+ + S
Sbjct: 229 --------CSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLS 280
Query: 332 EIEE-KNIVS-WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
++ K++V+ W +L+++YA G A +F Q+ + D V+SW+A+I ++
Sbjct: 281 VVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERD--------VVSWTAMISGYSH 332
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH----GHVVRVSMNK 445
G +EAL+LF K++ + + V + LS CA AL +GR IH G S+N+
Sbjct: 333 AGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIHRQYAGENWTCSINR 392
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQI--EKKDLITWNSMISGYGMNGLGENALATFEE 503
+ +++MY KCG ++ VF + +KK +NS+ISG +G GE A FEE
Sbjct: 393 GF--TSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHHGRGEYAKNLFEE 450
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M G KPD + FVAVLSAC H GLV+ G+++F+ M + + P+MEHY CMVDLLGRAG
Sbjct: 451 MGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSPEMEHYGCMVDLLGRAG 510
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
L EA ++ MP + NA +W LL++C++H + +A + ++ L + Y++LSN
Sbjct: 511 HLDEAHRLILKMPFKANAVIWRALLSACKVHGDVALARVASYELVELQHDHGAGYVMLSN 570
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEE 683
+ + + + ++AA +R + G++K G S++E+ R +H F +G+ + K +L +
Sbjct: 571 MLSDTDQHDEAASLRKAIDNVGIQKPPGWSYVEMNRSLHKFLAGDKSHPEAKTTELMLRD 630
Query: 684 L 684
+
Sbjct: 631 I 631
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 327 bits (837), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/470 (35%), Positives = 274/470 (58%), Gaps = 13/470 (2%)
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAV 277
D A +F+++E PN ++ +++ ++ + + +F+ M+ +
Sbjct: 56 DYATMIFQQLE----NPNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPF 111
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
V+ CA L +G+ +H V K G + + +NALI +Y K GD+ A ++ E+ E++
Sbjct: 112 VIKSCAGLLCRRLGQQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERD 171
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
VSWN+LI+ + G A EVF + M ++SW+ +I +A G +AL
Sbjct: 172 AVSWNSLISGHVRLGQMKSAREVFDE--------MPCRTIVSWTTMINGYARGGCYADAL 223
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
+FR+MQ+ + + +++ +L CA+ AL +G+ IH + + KN V N L+ MY
Sbjct: 224 GIFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMY 283
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCGC++E +F Q+ +KD+I+W++MI G +G G A+ FE+M +AG P+GV FV
Sbjct: 284 AKCGCIDEAWGLFNQMIEKDVISWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFV 343
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
VLSAC+HAGL NEG R FD+M ++ +EPQ+EHY C+VDLLGR+G +++A D + MPM
Sbjct: 344 GVLSACAHAGLWNEGLRYFDVMRVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPM 403
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
+P++ W +LL+SCR+H N ++A Q+ L E +G+Y+LL+NIYA +WE + V
Sbjct: 404 QPDSRTWNSLLSSCRIHHNLEIAVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNV 463
Query: 638 RISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
R ++K +KK G S IEV + F SG+ + + V +L+ L L
Sbjct: 464 RKLIRSKRIKKTPGCSLIEVNNLVQEFVSGDDSKPFSQEVFWILKGLTLH 513
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 185/373 (49%), Gaps = 16/373 (4%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F L+ C I +LK++H ++ + S FL ++L + + A +F+
Sbjct: 10 FVTTLRNCPKIAELKKIHAHIVKLSLSQSNFLVTKMLDLCDNLSHVDYATMIFQQLE--- 66
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ +N+I+R N + A+ ++ +M D FTFP VI++C + R
Sbjct: 67 NPNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRL-- 124
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
GQ VH HV + G + + N LI MY K G MS ++++++++ ++ +SWN + SG
Sbjct: 125 --GQQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGH 182
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
A E+F M + V+WT++++ +AR G + + +F M+ GIE
Sbjct: 183 VRLGQMKSAREVFDEMPCRTI----VSWTTMINGYARGGCYADALGIFREMQVVGIEPDE 238
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
++ VL CA L A +GK IH + K GF V NAL+ +Y K G + A LF++
Sbjct: 239 ISVISVLPACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQ 298
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ EK+++SW+ +I A G A+ VF ++K + PN +++ V+ A A G
Sbjct: 299 MIEKDVISWSTMIGGLANHGKGYAAIRVFEDMQK----AGVTPNGVTFVGVLSACAHAGL 354
Query: 393 GEEALDLFRKMQL 405
E L F M++
Sbjct: 355 WNEGLRYFDVMRV 367
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 128/237 (54%), Gaps = 15/237 (6%)
Query: 28 NSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
N+L+D + +C + QV+ ++ T +A ++ + ++S + R G++ AR VF+
Sbjct: 145 NALIDMY----TKCGDMSGAYQVYEEM--TERDAVSWNS--LISGHVRLGQMKSAREVFD 196
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
P C++ + W +++ G Y +AL ++ +M+ +G+ D + V+ AC +G+
Sbjct: 197 EMP--CRTI-VSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVLPACAQLGA 253
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
G+ +H + + GF N + N L+ MYAK G + +++ LF+++ K+ ISW+
Sbjct: 254 LEV----GKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVISWST 309
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
M G A + A+ +F+ M+ G+ PN VT+ +LS+ A G E + FD+MR
Sbjct: 310 MIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWNEGLRYFDVMR 366
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 132/313 (42%), Gaps = 48/313 (15%)
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
C + A L ++IH H+V++S++++ + +L++ ++ ++F+Q+E ++ ++
Sbjct: 17 CPKIAEL---KKIHAHIVKLSLSQSNFLVTKMLDLCDNLSHVDYATMIFQQLENPNVFSY 73
Query: 482 NSMISGYGMNGLGENALATFEEMIEA-GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM- 539
N++I Y N A+ F +M+ PD F V+ +C AGL+ RR+ +
Sbjct: 74 NAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSC--AGLL--CRRLGQQVH 129
Query: 540 --VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS----CRM 593
V +F + ++D+ + G + A + + M E +A W +L++ +M
Sbjct: 130 AHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEM-TERDAVSWNSLISGHVRLGQM 188
Query: 594 HKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG-------- 645
+V + M + T S+ + N YA G + DA + + G
Sbjct: 189 KSAREVFDEMPCR-------TIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISV 241
Query: 646 ---LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP------- 695
L A +EV + IH +S + LKN V L GC+
Sbjct: 242 ISVLPACAQLGALEVGKWIHKYSEKSGF---LKNA-GVFNALVEMYAKCGCIDEAWGLFN 297
Query: 696 ---DNDIILWEMM 705
+ D+I W M
Sbjct: 298 QMIEKDVISWSTM 310
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 187/622 (30%), Positives = 320/622 (51%), Gaps = 59/622 (9%)
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
AR++F+ P + ++ L + L L++ +++ + + G PLV+++
Sbjct: 127 ARHLFDVVP---RPTAALCCAFLSGLSKLSLHQEFIEVVSSLHRRGGAIPSGCIPLVLKS 183
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C + G H H L G G+V + L+ YAK G M + F ++ VK+
Sbjct: 184 CAQSAAS----CQGSQTHCHALVRGMLGDVFVQTALVDFYAKNGDMDSALMAFKEMPVKD 239
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
I N + +G++ + D + A LF M +W S+++ +A G E + LFD
Sbjct: 240 PIPMNCLITGYSKSGDVEEARRLFDSMPRR----TSASWNSMIACYAHGGEFREALTLFD 295
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
M + G A I V S+CA K G
Sbjct: 296 QMLREGASPNAITITTVFSICA-----------------------------------KTG 320
Query: 322 DVKVAQNLFSEIEE---KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
D+ + + I E +N++ AL+ Y + DEA F + M R +V+
Sbjct: 321 DLDTGRRARAWIREEDLQNVIVHTALMEMYVKCRAIDEARHEFDR--------MPRRDVV 372
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHV 438
+WS +I ++ NGR E+L+LF +M+ N VT+ G+LS CA+ + +G +I ++
Sbjct: 373 AWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGNYI 432
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
++ + + L++MY KCG + VF ++E+K ++TWNSMI G +NG E+A+
Sbjct: 433 ESQTLPLTSYLGSALIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFAEDAI 492
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
A + +M+ G +P+ V FVA+L+AC+HAGLV++G F+ M ++ + PQ+EH AC+VDL
Sbjct: 493 ALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEHCACIVDL 552
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
L ++G L EA + +M +EPNA +W TLL++CR H + ++A+ A ++ L + Y
Sbjct: 553 LCKSGRLWEAYKFICDMEVEPNAVIWSTLLSACRAHADVELAKLAAGKLVALEPNNSSIY 612
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
+LLSNIYA +G W D ++R ++K L+K++ SWIE+ ++H F ++ +
Sbjct: 613 VLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYHPRSAEIY 672
Query: 679 EVLEELALQMENKGCVPDNDII 700
V++ L LQ+E PD+++I
Sbjct: 673 NVVDGLGLQLERTS--PDHELI 692
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 160/341 (46%), Gaps = 47/341 (13%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y++ G + +AR +F++ P + +S WNS++ G + AL L+ +M + G +
Sbjct: 250 YSKSGDVEEARRLFDSMP---RRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPNA 306
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
T V C G G+ + + Q NV + L+ MY K + ++
Sbjct: 307 ITITTVFSICAKTGDL----DTGRRARAWIREEDLQ-NVIVHTALMEMYVKCRAIDEARH 361
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
FD++ ++ ++W+ M +G++ N +LELF+RM+ +PN VT
Sbjct: 362 EFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERMKATNCKPNEVT------------- 408
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
+ VLS CA L +D +G+ I ++ ++ +A
Sbjct: 409 ----------------------LVGVLSACAQLGSDELGEQIGNYIESQTLPLTSYLGSA 446
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
LI +Y K G V A+++F+ +E+K +V+WN++I A G ++A+ ++ K+ G +
Sbjct: 447 LIDMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFAEDAIALY---RKMVGDGI 503
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
+ PN +++ A++ A G ++ + F +M+ + V+ V
Sbjct: 504 Q-PNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQV 543
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 141/298 (47%), Gaps = 18/298 (6%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++ +Y + + +AR+ F+ P + + W++++ NG +L+L+ +M+
Sbjct: 346 LMEMYVKCRAIDEARHEFDRMP---RRDVVAWSTMIAGYSQNGRPHESLELFERMKATNC 402
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ T V+ AC +GS G + + L + ++ + LI MY K G ++
Sbjct: 403 KPNEVTLVGVLSACAQLGSDELGEQIGNYIESQTLPL----TSYLGSALIDMYTKCGHVA 458
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ +F+++ K ++WN M G ALN + A+ L+++M +G++PN VT+ +LL++
Sbjct: 459 RARSVFNRMEQKVVVTWNSMIRGLALNGFAEDAIALYRKMVGDGIQPNEVTFVALLTACT 518
Query: 249 RCGRLEETMDLFDMMRKRG-IEVGAEAIAVVLSVCADLAADHMGKV--IHGFVIKGGFED 305
G +++ + F+ M+K+ + E A ++ + G++ + F+ E
Sbjct: 519 HAGLVDKGIAFFEEMKKKQHVSPQVEHCACIVDLLCK-----SGRLWEAYKFICDMEVEP 573
Query: 306 YVFVKNALICVYGKHGDV---KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
+ + L+ H DV K+A +E N + L YA+AGL + E+
Sbjct: 574 NAVIWSTLLSACRAHADVELAKLAAGKLVALEPNNSSIYVLLSNIYADAGLWGDVREI 631
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 121/315 (38%), Gaps = 77/315 (24%)
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
+ A++LF + A ++ ++ L E +EV S L + GG++
Sbjct: 125 RAARHLFDVVPRPTAALCCAFLSGLSKLSLHQEFIEVVSSLHR-RGGAIP---------- 173
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
S I +L CA+SAA G + H H + M
Sbjct: 174 ----------------------------SGCIPLVLKSCAQSAASCQGSQTHCHALVRGM 205
Query: 444 NKNILVQNGLLNMYMKCG---------------------CL----------EEGHLVFEQ 472
++ VQ L++ Y K G CL EE +F+
Sbjct: 206 LGDVFVQTALVDFYAKNGDMDSALMAFKEMPVKDPIPMNCLITGYSKSGDVEEARRLFDS 265
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+ ++ +WNSMI+ Y G AL F++M+ G P+ + V S C+ G ++ G
Sbjct: 266 MPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGASPNAITITTVFSICAKTGDLDTG 325
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL---- 588
RR +RE ++ + H A M ++ + + EA MP + W T++
Sbjct: 326 RRA-RAWIREEDLQNVIVHTALM-EMYVKCRAIDEARHEFDRMPRR-DVVAWSTMIAGYS 382
Query: 589 NSCRMHKNTDVAEAM 603
+ R H++ ++ E M
Sbjct: 383 QNGRPHESLELFERM 397
>gi|326520249|dbj|BAK07383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 192/552 (34%), Positives = 311/552 (56%), Gaps = 26/552 (4%)
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
+G R+ G+ H +L+ + + N LI +YA + + S F+ + +N S
Sbjct: 44 LGDVRY---LGRAAHALLLKTALNHHTLLSNRLIELYAMLNSPAASRTAFEDLPYRNAHS 100
Query: 205 WNMMFSGFAL-NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DM 262
+N + + + + AL L M N V++ +++S+ AR GR E + +F +
Sbjct: 101 YNNLLAALSRGSATLPDALHLLDAMPASSR--NVVSYNTIISALARNGRQGEALRVFARL 158
Query: 263 MRKR--GIEVGAEAIAVV--LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG 318
R R G EV + AVV S CA + A + +HG V+ G E V + NA++ Y
Sbjct: 159 ARDRCLGPEVALDRFAVVSVASACAGMGALRPLREMHGAVVVSGVEVTVIMANAMVDAYS 218
Query: 319 KHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
K G ++ A+ LF+++ ++ VSW ++I Y A DEA+ VF + + D I
Sbjct: 219 KAGRMEDARTLFNQMSIQDTVSWTSMIAGYCRAKRLDEAIRVFHMMPEQD--------TI 270
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHV 438
+W+A+I NG + ALDLF++M + + + L CA+ + GRE+HG +
Sbjct: 271 AWTALISGHEQNGEEDAALDLFQQMLVEGMAPTPFALVSSLGACAKLGLVTRGREVHGFI 330
Query: 439 VR--VSMNK-NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
+R + ++ NI + N L++MY KCG + LVF ++ ++D I+WNSM++G+ NG G+
Sbjct: 331 LRRRIGLDPFNIFIHNALIDMYSKCGDMATAMLVFARMSERDFISWNSMVTGFSHNGQGK 390
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
+LA F+ M++A +P V F+AVL+ACSHAGLV +GRRI + M + +EP+ EHYA
Sbjct: 391 QSLAMFKRMLDAEVQPTYVTFLAVLTACSHAGLVTDGRRILESM-QYHGVEPRAEHYASF 449
Query: 556 VDLLGRAGLLQEASDIVKNMP--MEPNAY-VWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
+D LGR L+EAS+ +K + + P WG LL +CR+H NT++AE +A +F L
Sbjct: 450 IDALGRNHQLEEASEFIKGLSSRIGPGTTGSWGALLGACRVHGNTEIAEKVAESLFQLEP 509
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
+G Y++LSNIYAA+G+W+DA ++R K KGL+K SWIEV+ HMF + ++
Sbjct: 510 GNSGRYVMLSNIYAAAGQWDDARRIRAIMKEKGLRKDQACSWIEVRSAKHMFVADDTSHC 569
Query: 673 DLKNVCEVLEEL 684
+ + +L+ L
Sbjct: 570 EANEIYGMLDRL 581
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 154/325 (47%), Gaps = 26/325 (8%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y R RL +A VF P + ++ W +++ + NG + AL L+ +M G+
Sbjct: 248 YCRAKRLDEAIRVFHMMP---EQDTIAWTALISGHEQNGEEDAALDLFQQMLVEGMAPTP 304
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVL--QMGFQG-NVHIVNELIGMYAKMGQMSD 189
F + AC +G + G+ VH +L ++G N+ I N LI MY+K G M+
Sbjct: 305 FALVSSLGACAKLG----LVTRGREVHGFILRRRIGLDPFNIFIHNALIDMYSKCGDMAT 360
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
+ +F ++ +++ISWN M +GF+ N +L +FKRM ++P +VT+ ++L++ +
Sbjct: 361 AMLVFARMSERDFISWNSMVTGFSHNGQGKQSLAMFKRMLDAEVQPTYVTFLAVLTACSH 420
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM----GKVIHGFVIKGGFED 305
G + + + + M+ G+E AE A + L +H + I G + G
Sbjct: 421 AGLVTDGRRILESMQYHGVEPRAEHYASFIDA---LGRNHQLEEASEFIKGLSSRIG-PG 476
Query: 306 YVFVKNALICVYGKHGDV----KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
AL+ HG+ KVA++LF ++E N + L YA AG D+A +
Sbjct: 477 TTGSWGALLGACRVHGNTEIAEKVAESLF-QLEPGNSGRYVMLSNIYAAAGQWDDARRIR 535
Query: 362 SQLEKLDGGSMERPNVISWSAVIGA 386
+ +++ + + SW V A
Sbjct: 536 AIMKE---KGLRKDQACSWIEVRSA 557
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 216/738 (29%), Positives = 361/738 (48%), Gaps = 93/738 (12%)
Query: 2 RHSLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANA 61
RH + P P S ++ NS H ++C T L Q+H L +TG +
Sbjct: 325 RHEVPGDP----PGEASAEYACFFTLNSSRSLTSH--KRCATSTTLTQLHAHLFITGLHR 378
Query: 62 SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYV 121
+ +++ YA+ G ++ VF+T P K S +W +++ V G +E A+ LY
Sbjct: 379 HPPASTKLIESYAQIGIFESSKRVFDTFP---KPDSFMWGVLIKCYVWGGFFEEAVSLYH 435
Query: 122 KMRKLGVLGD-----GFTFPLVIRACKFMGSFRFRFSFGQI-----VHNHVLQMGFQGN- 170
+M V D F FP V++AC G GQ + + ++ + +
Sbjct: 436 EM----VYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISEAVEPDS 491
Query: 171 ------VHIVNELIGM-YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL--------N 215
+EL + ++G++ + + V ++ + + F G AL N
Sbjct: 492 VTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFV-IRRAMDPELDFLGPALMELYADTGN 550
Query: 216 F-DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
DC E K E ++W +L+S R G+ EE + LF M+ +G+ + +
Sbjct: 551 LRDCHKVFETIK-------EKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYS 603
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIK-GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+A LS C ++ +G IHG++IK G F D+V
Sbjct: 604 LASSLSACGTISFSQLGAQIHGYIIKTGNFNDFV-------------------------- 637
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
NALI YA+ G A ++F ++++ ++++W+++I F+ NG
Sbjct: 638 -------QNALIDMYAKCGFVHSANKMFEKIKE--------KSLVTWNSMICGFSQNGYS 682
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
EA+ LF +M + V + +T ++ C+ L G+ +H ++ + K+ + L
Sbjct: 683 VEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTAL 742
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
+MY KCG L+ H VF+++ ++ +++W+ MI+GYGM+G ++ F +M+ +G KP+
Sbjct: 743 TDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPND 802
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
+ F+ +LSACSHAG V EG+ F+ M EF +EP+ +H+ACMVDLL RAG L A I+
Sbjct: 803 ITFMHILSACSHAGAVEEGKLYFNSM-SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIIT 861
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
++P N+ +WG LLN CR+HK D+ +++ + + T TG Y LLSNIYA G W+
Sbjct: 862 SLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDK 921
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA--LQMENK 691
KVR K+KGL+KV G S IE+ +KI+ F G++ S K++ LE + +
Sbjct: 922 FGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVY 981
Query: 692 GCVPDNDIILWEMMGKKN 709
PDN I+ K+N
Sbjct: 982 DSEPDNSIVGTSKFNKEN 999
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 198/648 (30%), Positives = 320/648 (49%), Gaps = 81/648 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K+ H Q+I G + + ++S+Y + G + AR VF+ K +N ++
Sbjct: 182 KEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGL---YKRDVSTFNVMIGGY 238
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+G E A +L+ +M++ G + +F ++ C S ++G+ VH + G
Sbjct: 239 AKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGC----STPEALAWGKAVHAQCMNTGL 294
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+V + LI MY G + + ++FDK++V++ +S
Sbjct: 295 VDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVS----------------------- 331
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
WT ++ +A +E+ LF M++ GI+ +++ CA A
Sbjct: 332 ------------WTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSAD 379
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+ + IH V++ GF + V AL+ +Y K G +K
Sbjct: 380 LSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIK----------------------- 416
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
+A +VF +M R +V+SWSA+IGA+ NG GEEA + F M+
Sbjct: 417 --------DARQVFD--------AMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNN 460
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
V + VT LL+ C AL++G EI+ ++ + +I V N L+NM +K G +E
Sbjct: 461 VEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERAR 520
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
+FE + ++D++TWN MI GY ++G AL F+ M++ F+P+ V FV VLSACS AG
Sbjct: 521 YIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAG 580
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
V EGRR F ++ I P ME Y CMVDLLGRAG L EA ++ MP++PN+ +W TL
Sbjct: 581 FVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTL 640
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
L +CR++ N DVAE A + Y+ LS++YAA+G WE+ AKVR +++G++
Sbjct: 641 LAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVR 700
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
K G +WIEV+ K+H F + + L L ++ +G +P
Sbjct: 701 KEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIP 748
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 133/564 (23%), Positives = 248/564 (43%), Gaps = 86/564 (15%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
L Q+C + KQV + +I +G + + ++ +++ G + +AR F++
Sbjct: 67 LFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSVE--- 123
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + WN+I+ G + A L+ +M + TF +V+ AC +
Sbjct: 124 NKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKL--- 180
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ H V+++GF + I L+ MY K G M + ++FD
Sbjct: 181 -GKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDG----------------- 222
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
L+KR + T+ ++ +A+ G E+ LF M++ G +
Sbjct: 223 ----------LYKR--------DVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRI 264
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ +L C+ A GK +H + G D V V ALI +Y G ++ A+ +F +
Sbjct: 265 SFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDK- 323
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
M+ +V+SW+ +I +A N
Sbjct: 324 --------------------------------------MKVRDVVSWTVMIRGYAENSNI 345
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
E+A LF MQ + + +T +++ CA SA L++ REIH VVR ++LV L
Sbjct: 346 EDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTAL 405
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY KCG +++ VF+ + ++D+++W++MI Y NG GE A TF M +PD
Sbjct: 406 VHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDV 465
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
V ++ +L+AC H G ++ G I+ ++ + + ++++ + G ++ A I +
Sbjct: 466 VTYINLLNACGHLGALDLGMEIYTQAIKA-DLVSHIPVGNALINMNVKHGSIERARYIFE 524
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNT 597
NM ++ + W ++ +H N
Sbjct: 525 NM-VQRDVVTWNVMIGGYSLHGNA 547
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
+S T L C +G+++ H+++ NI N L+ ++ CG + E F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
+ +E K ++TWN++I+GY G + A A F +M++ +P + F+ VL ACS +
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179
Query: 531 EGRRIFDMMVR-----EFRI 545
G+ +++ +FRI
Sbjct: 180 LGKEFHAQVIKVGFVSDFRI 199
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 182/562 (32%), Positives = 301/562 (53%), Gaps = 76/562 (13%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
GQ VH H+++ ++ V++ LI +Y K + D+ ++ D++
Sbjct: 496 GQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP---------------- 539
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
E N V+WT+++S +++ G E + LF M G
Sbjct: 540 -------------------ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFT 580
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
A VL+ C + +G+ IH VIK FE ++FV ++L+ +Y
Sbjct: 581 FATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMY----------------- 623
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
A+AG EA VF L + D V+S +A+I +A G E
Sbjct: 624 --------------AKAGKICEARRVFDGLPERD--------VVSCTAIISGYAQLGLDE 661
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
EALDLFR++Q + +N VT + +L+ + AAL+ GR++H HV+R + +++QN L+
Sbjct: 662 EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLI 721
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG-FKPDG 513
+MY KCG L +F+ + ++ +I+WN+M+ GY +GLG A+ F+ M E KPD
Sbjct: 722 DMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDS 781
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFR-IEPQMEHYACMVDLLGRAGLLQEASDIV 572
V F+AVLS CSH G+ + G IF MV + EP++EHY C+VDL GRAG ++EA + +
Sbjct: 782 VTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFI 841
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
K MP EP A +WG+LL +CR+H+N + E +A ++ + +E G+Y++LSN+YA++GRW+
Sbjct: 842 KKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWD 901
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
D VR K K + K G+SWIE+ + +H F + + + V + EL+++++ G
Sbjct: 902 DVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAG 961
Query: 693 CVPDNDIILWEMMGKKNVKRIQ 714
VP+ +L+++ ++ K +Q
Sbjct: 962 YVPELSCVLYDVDDEQKEKILQ 983
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 222/486 (45%), Gaps = 89/486 (18%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+D +L +C I + ++VH +I T +L R++ +Y + L DAR V + P
Sbjct: 480 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 539
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + W +++ G AL L+V+M G + FTF V+ +C F+
Sbjct: 540 ---ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQL 596
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H+ V++ F+ ++ + + L+ MYAK G++ ++ ++FD + ++ +S + S
Sbjct: 597 ----GRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIIS 652
Query: 211 GFA-LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
G+A L D + AL+LF+R++ EG+ N+VT+ S
Sbjct: 653 GYAQLGLD-EEALDLFRRLQREGMRSNYVTYAS--------------------------- 684
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
VL+ + LAA G+ +H V++ YV ++N+LI +Y K G + ++ +
Sbjct: 685 --------VLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRI 736
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK--------------LDG---GSM 372
F + E+ ++SWNA++ Y++ GL EAVE+F +++ L G G M
Sbjct: 737 FDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGM 796
Query: 373 E-----------------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
E P + + V+ F GR EEA + +KM A
Sbjct: 797 EDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAA---IW 853
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNK--NILVQNGLLNMYMKCGCLEEGHLVFEQI 473
LL C ++IG + ++ + N ++ L N+Y G ++ V E +
Sbjct: 854 GSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVI---LSNLYASAGRWDDVRTVRELM 910
Query: 474 EKKDLI 479
++K +I
Sbjct: 911 KEKAVI 916
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 86/159 (54%), Gaps = 1/159 (0%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
+L+ C A+ G+ +H H+++ + ++ L+ +Y KC CL + V +++ +++
Sbjct: 483 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 542
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+++W +MISGY G AL F EM+ +G P+ F VL++C+ + GR+I
Sbjct: 543 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 602
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
++++ E + + ++D+ +AG + EA + +P
Sbjct: 603 LVIKT-SFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 206/661 (31%), Positives = 326/661 (49%), Gaps = 97/661 (14%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS AR GR+ +AR +F+ P +++ WN+++ +G +A L+ +M
Sbjct: 55 MLSALARHGRIDEARALFDGMP---SRNAVSWNAMIAALSDHGRVADARGLFDRMPSR-- 109
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D F++ +++ G ++ + + +M N +I YAK G+
Sbjct: 110 --DDFSWTVMVSCYARAGEL-------ELARDVLDRMPGDKCTACYNAMISGYAKNGRFD 160
Query: 189 DSFKL-------------------------------FDKVRVKNYISWNMMFSGFALNFD 217
D+ KL FD++ K+ +SWN+M GF D
Sbjct: 161 DAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEGFVRAGD 220
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV------G 271
D A F R+E PN V+W +LL+ + R GR+ + DLFD M +R + G
Sbjct: 221 LDAAASFFGRIE----SPNVVSWVTLLNGYCRAGRISDARDLFDRMPERNVVACNVMLDG 276
Query: 272 AEAIAVVLSVCADLAADHMGK-------VIHGFVIKGGFEDY-----------VFVKNAL 313
++ + C L + GK +I G G ++ V K AL
Sbjct: 277 YVRLSRLEEAC-KLFDEMPGKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTAL 335
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD----- 368
+ Y + V A+ +F +E + V WN +I+ Y + G+ +EA+ +F ++ D
Sbjct: 336 MHGYLQRNMVNDARQIFDGMEVHDTVCWNTMISGYVQRGMLEEAMLLFQRMPNKDTVSWN 395
Query: 369 --------GGSME----------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
GG M R N +SW++VI F NG +A F M+ A
Sbjct: 396 TMIAGYAQGGQMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRA 455
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
+ T + L CA AAL++GR++H +VR ++ +N L++ Y KCG + E +F
Sbjct: 456 DWSTYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIF 515
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
+++ KD+++WN+++ GY NG G A++ F EM G +PD V FV +LSACS AGL++
Sbjct: 516 DEMVGKDIVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLID 575
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
EG F+ M E+ ++P EHYACM DLLGRAG L EA ++V+ M ++PNA VWG LL +
Sbjct: 576 EGLGFFNSMTEEYSLKPVAEHYACMADLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGA 635
Query: 591 CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVA 650
C+M+KN ++A A ++ L +Y+LLSNI A +G+W++A K R S K KG K
Sbjct: 636 CQMYKNHELARLAAEKLSELEPCRASNYVLLSNISAEAGKWDEAEKARASIKEKGANKPP 695
Query: 651 G 651
G
Sbjct: 696 G 696
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 209/510 (40%), Gaps = 122/510 (23%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N+ + A+ GQ++ + +LFD + +N +++N M S A + D A LF M
Sbjct: 22 NQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMP----S 77
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG-----IEVGAEAIAVVLSVCADLAADH 289
N V+W +++++ + GR+ + LFD M R + V A A L + D+
Sbjct: 78 RNAVSWNAMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYARAGELELARDVLDRM 137
Query: 290 MGK--------VIHGFVIKGGFEDYV-----------FVKNALICVYGKHGDVKVAQNLF 330
G +I G+ G F+D V F N+ + + G + A F
Sbjct: 138 PGDKCTACYNAMISGYAKNGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQFF 197
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
E+ EK++VSWN ++ + AG D A F G +E PNV+SW ++ +
Sbjct: 198 DEMVEKDMVSWNLMLEGFVRAGDLDAAASFF--------GRIESPNVVSWVTLLNGYCRA 249
Query: 391 GRGEEALDLFRKMQLAKVVA---------------------------NSVTISGLLSVCA 423
GR +A DLF +M VVA NS++ + ++S A
Sbjct: 250 GRISDARDLFDRMPERNVVACNVMLDGYVRLSRLEEACKLFDEMPGKNSISWTTIISGLA 309
Query: 424 ESAALNIGREI----------------HGHVVRVSMNK-----------NILVQNGLLNM 456
+ L +++ HG++ R +N + + N +++
Sbjct: 310 RAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMVNDARQIFDGMEVHDTVCWNTMISG 369
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM----------IE 506
Y++ G LEE L+F+++ KD ++WN+MI+GY G A+ F M +
Sbjct: 370 YVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYAQGGQMRKAIGIFRRMSRKNTVSWNSVI 429
Query: 507 AGF---------------------KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRI 545
+GF + D + + L AC++ ++ GR++ ++VR I
Sbjct: 430 SGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRACANLAALHVGRQLHSLLVRSGHI 489
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
A ++ + G + EA I M
Sbjct: 490 NDLFARNA-LISTYAKCGRMLEAKQIFDEM 518
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 133/282 (47%), Gaps = 31/282 (10%)
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
N+++ +HG + A+ LF + +N VSWNA+I + ++ G +A +F ++ D
Sbjct: 53 NSMLSALARHGRIDEARALFDGMPSRNAVSWNAMIAALSDHGRVADARGLFDRMPSRDD- 111
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA-NSVTISGLLSVCAESAALN 429
SW+ ++ +A G E A D+ +M K A + ISG A+
Sbjct: 112 -------FSWTVMVSCYARAGELELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAVK 164
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
+ RE+ ++ N L + G + F+++ +KD+++WN M+ G+
Sbjct: 165 LLREMPA--------PDLFSWNSALAGLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEGFV 216
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
G +A A+F IE+ P+ V++V +L+ AG +++ R +FD M P+
Sbjct: 217 RAG-DLDAAASFFGRIES---PNVVSWVTLLNGYCRAGRISDARDLFDRM-------PER 265
Query: 550 EHYAC--MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
AC M+D R L+EA + MP + N+ W T+++
Sbjct: 266 NVVACNVMLDGYVRLSRLEEACKLFDEMPGK-NSISWTTIIS 306
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
L+ A S L R + + R +N + N +L+ + G ++E +F+ + ++
Sbjct: 25 LTRLARSGQLAAARRLFDSMPR----RNTVTYNSMLSALARHGRIDEARALFDGMPSRNA 80
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
++WN+MI+ +G +A F+ M D ++ ++S + AG + R + D
Sbjct: 81 VSWNAMIAALSDHGRVADARGLFDRMP----SRDDFSWTVMVSCYARAGELELARDVLDR 136
Query: 539 MVREFRIEPQMEHYAC---MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
M P + AC M+ + G +A +++ MP P+ + W + L
Sbjct: 137 M-------PGDKCTACYNAMISGYAKNGRFDDAVKLLREMP-APDLFSWNSAL 181
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 31/253 (12%)
Query: 25 TYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
TY + L C + +H +Q+H+ L+ +G F ++S YA+ GR+ +A+
Sbjct: 459 TYASCLRACAN-----LAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQ 513
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
+F+ + WN+++ SNG A+ ++ +M GV D TF ++ AC
Sbjct: 514 IFDEM---VGKDIVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSR 570
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYI 203
G F + + + +L+G + G+++++F+L ++++ N
Sbjct: 571 AGLIDEGLGFFNSMTEEYSLKPVAEHYACMADLLG---RAGKLNEAFELVQGMQIQPNAG 627
Query: 204 SWNMMFSGFALNFDCDGALELFKRME--------LEGLEPNFVTWTSLLSS-HARCGRLE 254
W + GA +++K E L LEP + LLS+ A G+ +
Sbjct: 628 VWGALL----------GACQMYKNHELARLAAEKLSELEPCRASNYVLLSNISAEAGKWD 677
Query: 255 ETMDLFDMMRKRG 267
E ++++G
Sbjct: 678 EAEKARASIKEKG 690
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 202/684 (29%), Positives = 348/684 (50%), Gaps = 89/684 (13%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFD 92
+LQ C + QL +++H L+ G + A +L +YAR G + A VF E D
Sbjct: 271 VLQVCAELAQLNHGRELHAALLKCGTEFNIQCNA-LLVMYARCGWVDSALRVFREIGDKD 329
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
S WNS+L V N LY A+ + +M + G D ++ A +G R
Sbjct: 330 YIS----WNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLG----RL 381
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ VH + ++ ++ I N L+ MY K + S ++FD++R+K+++S
Sbjct: 382 INGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVS-------- 433
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
WT++++ +A+ R E + F +K GI+V
Sbjct: 434 ---------------------------WTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDP 466
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ +L C+ L + + K +H + I+ G D + +KN +I +YG+ G+V A N
Sbjct: 467 MMMGSILEACSGLKSISLLKQVHSYAIRNGLLDLI-LKNRIIDIYGECGEVCYALN---- 521
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+F L+K D +++W++++ FA NG
Sbjct: 522 ---------------------------IFEMLDKKD--------IVTWTSMVNCFAENGL 546
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
EA+ LF KM A + +SV + G+L A ++L G+EIHG ++R V +
Sbjct: 547 LHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSS 606
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++MY CG + VF++ + KD++ W +MI+ GM+G G+ A+ F+ M+E G PD
Sbjct: 607 LVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPD 666
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
V+F+A+L ACSH+ LV+EG+ DMMV +++++P EHYAC+VDLLGR+G +EA +
Sbjct: 667 HVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFI 726
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
K+MP+EP + VW LL +CR+HKN ++A ++ L + G+Y+L+SN++A G+W
Sbjct: 727 KSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWN 786
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
+ ++R +GL+K SWIE+ +H F++ + D + + L E+ ++ +G
Sbjct: 787 NVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREG 846
Query: 693 -CVPDNDIILWEMMGKKNVKRIQR 715
V D +L ++ ++ + + R
Sbjct: 847 QYVEDTSFVLHDVSEEEKIDLLHR 870
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/555 (24%), Positives = 249/555 (44%), Gaps = 91/555 (16%)
Query: 42 KTIHQLKQVHNQLIVTGA---NASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSL 98
+ + + +Q+H + TGA + + FLA ++L +Y + GRL DA +F+ P +
Sbjct: 69 RAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMP---ARTVF 125
Query: 99 LWNSILRVNVSNGLYENALKLYVKMRK----LGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
WN+++ +S+G A+ +Y MR G DG T V++AC G R
Sbjct: 126 SWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRC---- 181
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G VH ++ G + + N L+GMYAK G + + ++F+ +R
Sbjct: 182 GSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMR---------------- 225
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
DG + +W S +S + G E +DLF M+ G + +
Sbjct: 226 ----DGR--------------DVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYT 267
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
VL VCA+LA + G+ +H ++K G E + NAL+ +Y + G V A +F EI
Sbjct: 268 TVGVLQVCAELAQLNHGRELHAALLKCGTE-FNIQCNALLVMYARCGWVDSALRVFREIG 326
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
+K+ +SWN++++ Y + L EA++ F G NG
Sbjct: 327 DKDYISWNSMLSCYVQNRLYAEAIDFF-----------------------GEMVQNG--- 360
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
+ I LLS L GRE+H + V+ ++ ++ + N L+
Sbjct: 361 -------------FNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLM 407
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY+KC +E VF+++ KD ++W ++I+ Y + A+ F + G K D +
Sbjct: 408 DMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPM 467
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
++L ACS ++ +++ +R ++ +++ ++D+ G G + A +I +
Sbjct: 468 MMGSILEACSGLKSISLLKQVHSYAIRNGLLDLILKNR--IIDIYGECGEVCYALNIFE- 524
Query: 575 MPMEPNAYVWGTLLN 589
M + + W +++N
Sbjct: 525 MLDKKDIVTWTSMVN 539
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 197/449 (43%), Gaps = 83/449 (18%)
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVH---IVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
+ R S G+ +H H + G G+ + +L+ MY K G++ D+ +LFD + +
Sbjct: 66 AVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVF 125
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
SWN + + LSS G E + ++ M
Sbjct: 126 SWNALIG-------------------------------ACLSS----GGAGEAVGVYRAM 150
Query: 264 RKRGIEVGAE----AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
R GA +A VL C G +HG +K G + V NAL+ +Y
Sbjct: 151 RASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMY-- 208
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
A+ GL D A+ VF + DG +V S
Sbjct: 209 -----------------------------AKCGLLDSALRVFEWMR--DG-----RDVAS 232
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVV 439
W++ I NG EALDLFR+MQ NS T G+L VCAE A LN GRE+H ++
Sbjct: 233 WNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALL 292
Query: 440 RVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
+ NI N LL MY +CG ++ VF +I KD I+WNSM+S Y N L A+
Sbjct: 293 KCGTEFNIQC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAID 351
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
F EM++ GF PD V++LSA H G + GR + V++ R++ ++ ++D+
Sbjct: 352 FFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQ-RLDSDLQIANTLMDMY 410
Query: 560 GRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ ++ ++ + M ++ + W T++
Sbjct: 411 IKCYSVECSARVFDRMRIKDHV-SWTTII 438
>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
Length = 867
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 213/697 (30%), Positives = 351/697 (50%), Gaps = 91/697 (13%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRL-FDARNVFETAPFDCKSSSLLWNSILRV 106
K VH +I +G F ++S+YA+ G + DA VF++ + WN+++
Sbjct: 160 KSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSI---IHKDVVSWNAMIAG 216
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF--GQIVHNHVLQ 164
NGL + A L+ M K V + T ++ C SF + G+ +H++VLQ
Sbjct: 217 LAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVC---ASFDENIAHRCGRQIHSYVLQ 273
Query: 165 MG-FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
+V + N L+ Y K+G+ ++ LF + ++ +SWN + +G+ALN + +L
Sbjct: 274 WPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLH 333
Query: 224 LFKRM-ELEGLEPNFVTWTSLL------------------------------------SS 246
+F + LE L + VT S+L S
Sbjct: 334 VFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSF 393
Query: 247 HARCGRLEETMDLFDM-------------------------------MRKRGIEVGAEAI 275
+A+CG +EE F M M K I + I
Sbjct: 394 YAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTI 453
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGG---FEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
++ CA L K IHG+ I+ G V NA++ Y K G+++ A +F
Sbjct: 454 LTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQN 513
Query: 333 IEEK-NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+ EK N+V+ N+LI+ Y G +A +FS + + D + +W+ ++ +A N
Sbjct: 514 LSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETD--------LTTWNLMVRVYAEND 565
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
E+AL+LF K+Q + + VTI L+ VC + A++++ R+ HG+++R S +++ ++
Sbjct: 566 CPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSF-EDLHLKG 624
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
LL+ Y KCG + + +F+ KDL+ + +MI GY M+G+ E AL TF M+ G KP
Sbjct: 625 TLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKP 684
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D V F ++LSACSHAG + EG +IFD + + ++P +E +AC+VDLL R G + EA
Sbjct: 685 DHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSF 744
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
V +P+E NA +WGTLL +C+ + ++ +A ++F + G+Y++LSN+YAA RW
Sbjct: 745 VTKIPIEANANIWGTLLGACKTYHEVELGRIVADKLFKIEANDIGNYIVLSNLYAADDRW 804
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
+ +VR + K LKK AG SWIEV+R ++F G+
Sbjct: 805 DGVMEVRKMMRNKDLKKPAGCSWIEVERTNNIFVVGD 841
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 145/614 (23%), Positives = 276/614 (44%), Gaps = 101/614 (16%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K +H+ ++ G + + +L++YA+ G L D +F+ + ++WN +L
Sbjct: 57 KCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFG---RCDPVIWNIVLSGY 113
Query: 108 VSNGLYE-NALKLYVKMRKLG-VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
+G + + +K++ M G V+ T V+ C G+ + G+ VH +V++
Sbjct: 114 SRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNL----NGGKSVHGYVIKS 169
Query: 166 GFQGNVHIVNELIGMYAKMGQMS-DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
GF+ + N L+ MYAK G ++ D++ +FD + K+ +SWN M +G A N A L
Sbjct: 170 GFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSL 229
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
F M ++PN+ T +A +L VCA
Sbjct: 230 FSLMMKGSVKPNYAT-----------------------------------VANILPVCAS 254
Query: 285 L---AADHMGKVIHGFVIKGG-FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
A G+ IH +V++ V V NAL+ Y K G K A++LF ++ +++VS
Sbjct: 255 FDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVS 314
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
WN +I YA G +++ VF L
Sbjct: 315 WNTIIAGYALNGEWLKSLHVFGNL------------------------------------ 338
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS-MNKNILVQNGLLNMYMK 459
+ L ++ +SVT+ +L CA+ L G+++H +++R + ++ N L++ Y K
Sbjct: 339 --VSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAK 396
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
CG +EE + F I +KDLI+WNS++ +G L+ M++ +PD V + +
Sbjct: 397 CGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTI 456
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRI----EPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
+ C+ V + + I +R + P + + ++D + G ++ A+ + +N+
Sbjct: 457 IHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGN--AILDAYSKCGNIEYANKMFQNL 514
Query: 576 PMEPNAYVWGTLLNS-CRMHKNTDVAEAMASQIFGLITETT-GSYMLLSNIYAASGRWED 633
+ N +L++ + + D A+ IF ++ET ++ L+ +YA + E
Sbjct: 515 SEKRNLVTCNSLISGYVGLGSHYD-----ANMIFSGMSETDLTTWNLMVRVYAENDCPEQ 569
Query: 634 AAKVRISAKTKGLK 647
A ++ + +T+G+K
Sbjct: 570 ALELFLKLQTQGMK 583
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 42/291 (14%)
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKR--GIEVGAEAIAVVLSVCADLAADHMGKVIH 295
+TW S + S R E + F K + E +A +L C+ L A ++GK +H
Sbjct: 1 MTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLH 60
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
+V+K G AL+ +Y K G + LF + + V WN +++ Y+ +G D
Sbjct: 61 SYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKND 120
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA-KVVANSVT 414
V + +FR M + +V+ +SVT
Sbjct: 121 ADV--------------------------------------MKVFRAMHSSGEVMPSSVT 142
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE-EGHLVFEQI 473
I+ +L VCA S LN G+ +HG+V++ + N L++MY KCG + + + VF+ I
Sbjct: 143 IATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSI 202
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
KD+++WN+MI+G NGL + A + F M++ KP+ +L C+
Sbjct: 203 IHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCA 253
>gi|357464703|ref|XP_003602633.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491681|gb|AES72884.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 184/549 (33%), Positives = 298/549 (54%), Gaps = 20/549 (3%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ +H+ +++ + N LI +Y+K G K FD + K +WN + S ++
Sbjct: 97 GKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLPNKTTRTWNTLLSFYSK 156
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR--GIEVGA 272
+ A +LF M + N V++ SL+S R +E + F M+ G+ +
Sbjct: 157 KGVFNQAYKLFDEMP----QRNLVSYNSLISGLTRHEFHKEAVKFFREMQNGVGGLMLDE 212
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ ++S C+ L + +HG GF + + NALI YGK G+ + LF
Sbjct: 213 FTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSFCLFRS 272
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ EK+ VSW +++ +Y A D+A +VF++ M +SW+A+I F NGR
Sbjct: 273 MVEKDAVSWTSMVVTYTRASRIDDACKVFNE--------MPVKYTVSWAALISGFVKNGR 324
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN---ILV 449
EAL++F +M V+ + T +L CA A + G+++H ++R + N + V
Sbjct: 325 CYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNVYV 384
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQ-IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
N L++MY KCG ++ +FE I KD+++WN++I+G+ NG GE++LA F+ MIE+
Sbjct: 385 FNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESN 444
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+P+ V F+ VLSAC+HAGLVN G + D M R + ++P+ HYA ++DLLGR L+EA
Sbjct: 445 IEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEEA 504
Query: 569 SDIVKNMPMEPNAYV--WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
+++ +P E + ++ WG +L CR+H N ++A A +F L E TG Y++LSNIYA
Sbjct: 505 MCLIEKVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALEPENTGRYVMLSNIYA 564
Query: 627 ASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELAL 686
ASGRW D ++R K +GLKK S IE+K H F + + + + E +L
Sbjct: 565 ASGRWSDTNRIRNVMKERGLKKEPAFSRIELKESRHEFVAKDKFHPQIGEIREANSKLVQ 624
Query: 687 QMENKGCVP 695
M + G P
Sbjct: 625 HMMDVGYQP 633
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 201/447 (44%), Gaps = 65/447 (14%)
Query: 8 QPHQFSPSNPSRPFSIITYNN----------SLLDCFDHLLQQC---KTIHQLKQVHNQL 54
+P Q P F ++ N S ++ F L+ C K++ K +H+QL
Sbjct: 45 KPRQLDPLTKPVLFFLVGERNTVMFHTNDFSSTIEKFSSLISNCVSAKSLKHGKALHSQL 104
Query: 55 IVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYE 114
I T FLA ++ +Y++ G F+ P ++ WN++L G++
Sbjct: 105 IKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLP---NKTTRTWNTLLSFYSKKGVFN 161
Query: 115 NALKLYVKM--RKL-------------------------------GVLGDGFTFPLVIRA 141
A KL+ +M R L G++ D FT ++
Sbjct: 162 QAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFREMQNGVGGLMLDEFTLVSLVSN 221
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C + + ++ + VH +GF+ N+ + N LI Y K G+ + SF LF + K+
Sbjct: 222 CSCLDTVKWL----RQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSFCLFRSMVEKD 277
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
+SW M + D A ++F M ++ V+W +L+S + GR E +++F
Sbjct: 278 AVSWTSMVVTYTRASRIDDACKVFNEMPVKYT----VSWAALISGFVKNGRCYEALEVFH 333
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED---YVFVKNALICVYG 318
M K G+ A+ VL CA A GK +H +I+G D V+V NAL+ +Y
Sbjct: 334 QMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDMYA 393
Query: 319 KHGDVKVAQNLFS-EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
K GD+K A+NLF I K++VSWN LIT +A+ G ++++ VF ++ + S PN
Sbjct: 394 KCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIE----SNIEPNH 449
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQ 404
+++ V+ A G L+L M+
Sbjct: 450 VTFLGVLSACNHAGLVNAGLELLDSME 476
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 160/351 (45%), Gaps = 43/351 (12%)
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
E + ++S C + GK +H +IK F+ N LI +Y K G + F +
Sbjct: 79 EKFSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDD 138
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ K +WN L++ Y++ G+ ++A ++F + M + N++S++++I +
Sbjct: 139 LPNKTTRTWNTLLSFYSKKGVFNQAYKLFDE--------MPQRNLVSYNSLISGLTRHEF 190
Query: 393 GEEALDLFRKMQ--LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
+EA+ FR+MQ + ++ + T+ L+S C+ + R++HG V N+++
Sbjct: 191 HKEAVKFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILN 250
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM-------------------------- 484
N L++ Y KCG +F + +KD ++W SM
Sbjct: 251 NALIDAYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTV 310
Query: 485 -----ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
ISG+ NG AL F +MI+ G P FV+VL AC+ L+ G+++ +
Sbjct: 311 SWAALISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQI 370
Query: 540 VREFRIEPQMEHYA--CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+R + Y ++D+ + G ++ A ++ + M + W TL+
Sbjct: 371 IRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLI 421
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 12/214 (5%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y R R+ DA VF P S W +++ V NG AL+++ +M K GVL
Sbjct: 288 YTRASRIDDACKVFNEMPVKYTVS---WAALISGFVKNGRCYEALEVFHQMIKEGVLPRA 344
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG---NVHIVNELIGMYAKMGQMSD 189
TF V+ AC + G+ VH +++ NV++ N L+ MYAK G M
Sbjct: 345 QTFVSVLDAC----ASEALIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDMYAKCGDMKS 400
Query: 190 SFKLFD-KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ LF+ + VK+ +SWN + +GFA N + +L +F RM +EPN VT+ +LS+
Sbjct: 401 AENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVTFLGVLSACN 460
Query: 249 RCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSV 281
G + ++L D M +R G++ + A+++ +
Sbjct: 461 HAGLVNAGLELLDSMERRYGVKPKSNHYALLIDL 494
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 118/248 (47%), Gaps = 21/248 (8%)
Query: 34 FDHLLQQCKT---IHQLKQVHNQLIVTGANASAF---LAARVLSIYARFGRLFDARNVFE 87
F +L C + I + KQVH Q+I ++ + F + ++ +YA+ G + A N+FE
Sbjct: 347 FVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDMYAKCGDMKSAENLFE 406
Query: 88 TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
+ WN+++ NG E++L ++ +M + + + TF V+ AC G
Sbjct: 407 MMIH--VKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVTFLGVLSACNHAGL 464
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV--RVKNYIS- 204
+++ + + G + + LI + + ++ ++ L +KV + N+I+
Sbjct: 465 VNAGL---ELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEEAMCLIEKVPNEISNHIAM 521
Query: 205 WNMMFSGFALNFDCDGALELFKRM--ELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFD 261
W + G ++ G LEL ++ L LEP +LS+ +A GR +T + +
Sbjct: 522 WGAVLGGCRVH----GNLELARKAAEALFALEPENTGRYVMLSNIYAASGRWSDTNRIRN 577
Query: 262 MMRKRGIE 269
+M++RG++
Sbjct: 578 VMKERGLK 585
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 272/470 (57%), Gaps = 43/470 (9%)
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
P W ++ ++R G E + L+ M ++ G A ++ L C+DL +G+ I
Sbjct: 138 PEEPVWVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGRAI 197
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
H ++K ++ E + V NAL+ Y E G
Sbjct: 198 HAQIVK------------------------------HDVGEADQVVNNALLGLYVEIGCF 227
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
DE ++VF + M + NV+SW+ +I FA GR E L FR MQ + + +T
Sbjct: 228 DEVLKVFEE--------MPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWIT 279
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
++ +L VCA+ AL+ G+EIHG +++ N ++ + N L++MY KCG + VF+++
Sbjct: 280 LTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMH 339
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
KDL +WN+M++G+ +NG AL F+EMI G +P+G+ FVA+LS CSH+GL +EG+R
Sbjct: 340 SKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKR 399
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+F ++++F ++P +EHYAC+VD+LGR+G EA + +N+PM P+ +WG+LLNSCR++
Sbjct: 400 LFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEALSVAENIPMRPSGSIWGSLLNSCRLY 459
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
N +AE +A ++F + G+Y++LSNIYA +G WED +VR G+KK AG SW
Sbjct: 460 GNVALAEVVAERLFEIEPNNPGNYVMLSNIYANAGMWEDVKRVREMMALTGMKKDAGCSW 519
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCE---VLEELALQMENKGCVPDNDIIL 701
I++K KIH F +G S SD + E + EL+ ++N G VP+ ++L
Sbjct: 520 IQIKHKIHTFVAGGS--SDFRCSAEYKKIWNELSNAVKNLGYVPNTGVVL 567
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 154/337 (45%), Gaps = 45/337 (13%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L +++++Y+ GR+ +AR VF+ + +W ++ NG AL LY M
Sbjct: 109 LKTKLITLYSVCGRVNEARRVFQIDD-EKPPEEPVWVAMAIGYSRNGFSHEALLLYRDML 167
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNE-LIGMYAK 183
V F F + ++AC + + G+ +H +++ +VN L+G+Y +
Sbjct: 168 SCCVKPGNFAFSMALKACSDLDNAL----VGRAIHAQIVKHDVGEADQVVNNALLGLYVE 223
Query: 184 MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
+G + K+F+++ +N +SWN + +GFA L F+ M+ EG+ +++T T++
Sbjct: 224 IGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTM 283
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
L VCA + A H GK IHG ++K
Sbjct: 284 -----------------------------------LPVCAQVTALHSGKEIHGQILKSRK 308
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
V + N+L+ +Y K G++ + +F + K++ SWN ++ ++ G EA+ +F +
Sbjct: 309 NADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDE 368
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
+ + PN I++ A++ + +G E LF
Sbjct: 369 MIRYG----IEPNGITFVALLSGCSHSGLTSEGKRLF 401
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 162/370 (43%), Gaps = 20/370 (5%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTG-ANASAFLAARVLSIYARFGRLFDARNVFETA 89
F L+ C + + +H Q++ A + +L +Y G + VFE
Sbjct: 178 FSMALKACSDLDNALVGRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEM 237
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
P + + + WN+++ G L + M++ G+ T ++ C + +
Sbjct: 238 P---QRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALH 294
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+ +H +L+ +V ++N L+ MYAK G++ K+FD++ K+ SWN M
Sbjct: 295 S----GKEIHGQILKSRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTML 350
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGI 268
+GF++N AL LF M G+EPN +T+ +LLS + G E LF ++M+ G+
Sbjct: 351 AGFSINGQIHEALCLFDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGV 410
Query: 269 EVGAEAIAVVLSVCADLAA-DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
+ E A ++ + D V ++ + + N+ +YG +V
Sbjct: 411 QPSLEHYACLVDILGRSGKFDEALSVAENIPMRPSGSIWGSLLNSCR-LYGNVALAEVVA 469
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV---I 384
EIE N ++ L YA AG+ ++ V+ ++ L G M++ SW + I
Sbjct: 470 ERLFEIEPNNPGNYVMLSNIYANAGMWED-VKRVREMMALTG--MKKDAGCSWIQIKHKI 526
Query: 385 GAFASNGRGE 394
F + G +
Sbjct: 527 HTFVAGGSSD 536
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 80/180 (44%), Gaps = 7/180 (3%)
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNK---NILVQNGLLNMYMKCGCLEEGHLVF 470
+IS L C +L GR++H H++R S N+ N ++ L+ +Y CG + E VF
Sbjct: 72 SISLFLHACISRRSLEHGRKLHLHLLR-SQNRVLENPTLKTKLITLYSVCGRVNEARRVF 130
Query: 471 EQIEKK--DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
+ ++K + W +M GY NG AL + +M+ KP AF L ACS
Sbjct: 131 QIDDEKPPEEPVWVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDN 190
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
GR I +V+ E ++ L G E + + MP + N W TL+
Sbjct: 191 ALVGRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMP-QRNVVSWNTLI 249
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 205/720 (28%), Positives = 339/720 (47%), Gaps = 104/720 (14%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
Q + VH Q+ G+ + + ++++Y RFG L A VF P+ + +N+++
Sbjct: 161 QGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPY---CDRVTFNTLIS 217
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
+ G E+AL+++ +MR G D T ++ AC +G + G+ +H+++L+
Sbjct: 218 RHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGD----LNKGKQLHSYLLKA 273
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
G + I L+ +Y K G + ++ ++F N + WN+M + D + +LF
Sbjct: 274 GMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLF 333
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
+M G+ PN T+ LL + G +
Sbjct: 334 CQMVAAGVRPNEFTYPCLLRTCTYAGEI-------------------------------- 361
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
++G+ IH IK GFE ++V LI +Y K+G + A+ + +E K++VSW ++I
Sbjct: 362 ---NLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMI 418
Query: 346 TSYAEAGLCDEAVEVFSQLEKL-----------------------DGGSMERPNVIS--- 379
Y + C EA+E F ++ G + +S
Sbjct: 419 AGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYS 478
Query: 380 -----WSAVIGAFASNGRG-------------------------------EEALDLFRKM 403
W+A++ +A GR EEAL++F KM
Sbjct: 479 ADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKM 538
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
A V N T +S A A + G++IH V++ V N L+++Y KCG +
Sbjct: 539 YQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSI 598
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
E+ + F ++ +++ ++WN++I+ +G G AL F++M + G KP+ V F+ VL+AC
Sbjct: 599 EDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAAC 658
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
SH GLV EG F M E I P+ +HYAC+VD+LGRAG L A V+ MP+ NA V
Sbjct: 659 SHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMV 718
Query: 584 WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKT 643
W TLL++CR+HKN ++ E A + L + SY+LLSN YA +G+W VR K
Sbjct: 719 WRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKD 778
Query: 644 KGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWE 703
+G++K G+SWIEVK +H F G+ L + + L +L ++ G + N + E
Sbjct: 779 RGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNYFLFHE 838
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 143/611 (23%), Positives = 261/611 (42%), Gaps = 114/611 (18%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H + I G ++ +YA+ G + AR VFE ++ W ++L
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLS---ARDNVSWVAMLSGYAR 120
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
NGL E A+ LY +M GV+ + V+ AC F G++VH V + G
Sbjct: 121 NGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAA----LFEQGRLVHAQVYKQGSCS 176
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
+ N LI +Y + G +S + ++F ++ + +++N + S A + + ALE+F+ M
Sbjct: 177 ETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMR 236
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
L G P+ VT SLL++ CA + +
Sbjct: 237 LSGWTPDCVTIASLLAA-----------------------------------CASIGDLN 261
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
GK +H +++K G ++ +L+ +Y K G + A +F + N+V WN ++ +Y
Sbjct: 262 KGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYG 321
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR---GEEA---------- 396
+ ++ ++F Q+ + RPN ++ ++ G GE+
Sbjct: 322 QISDLAKSFDLFCQMV----AAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFE 377
Query: 397 ---------LDLFRK-------------MQLAKVVANSVTISGLLS--VCAES------- 425
+D++ K ++ VV+ + I+G + C E+
Sbjct: 378 SDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDM 437
Query: 426 ----------------------AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
A+ G++IH V + ++ + N L+N+Y +CG
Sbjct: 438 QLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRS 497
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
+E +FE IE KD ITWN M+SG+ +GL E AL F +M +AG K + FV+ +SA
Sbjct: 498 KEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISAS 557
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
++ + +G++I +++ + E ++ L G+ G +++A M E N
Sbjct: 558 ANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKCGSIEDAKMQFFEMS-ERNHVS 615
Query: 584 WGTLLNSCRMH 594
W T++ SC H
Sbjct: 616 WNTIITSCSQH 626
Score = 155 bits (392), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 238/521 (45%), Gaps = 90/521 (17%)
Query: 114 ENALKLYV-KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVH 172
E L L+ K+R+ LG F +R C+ GS + + ++H + G +
Sbjct: 23 EKLLSLFAAKVRQCRGLGS-VDFACALRECR--GSVK-HWPLVPVIHAKAITCGLGEDRI 78
Query: 173 IVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG 232
N LI +YAK G + + ++F+++ ++ +SW
Sbjct: 79 AGNLLIDLYAKKGLVQRARRVFEQLSARDNVSW--------------------------- 111
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
++LS +AR G EE + L+ M G+ ++ VLS C A G+
Sbjct: 112 --------VAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGR 163
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
++H V K G V NALI +Y + G + +A+ +FSE+ + V++N LI+ +A+ G
Sbjct: 164 LVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCG 223
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+ A+E+F ++ +L G W+ +
Sbjct: 224 NGESALEIFEEM-RLSG----------WT----------------------------PDC 244
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
VTI+ LL+ CA LN G+++H ++++ M+ + +++ LL++Y+KCG + E +F+
Sbjct: 245 VTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKS 304
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
++ +++ WN M+ YG + F +M+ AG +P+ + +L C++AG +N G
Sbjct: 305 GDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLG 364
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
+I + ++ E M ++D+ + G L +A I++ + + + W +++
Sbjct: 365 EQIHLLSIKT-GFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAK-DVVSWTSMIAGYV 422
Query: 593 MHKNTDVAEAMAS----QIFGLITETTGSYMLLSNIYAASG 629
H+ EA+ + Q+FG+ + G L S I A +G
Sbjct: 423 QHEFCK--EALETFKDMQLFGIWPDNIG---LASAISACAG 458
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 181/370 (48%), Gaps = 49/370 (13%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LL+ C ++ +Q+H I TG + +++ ++ +Y+++G L AR + E
Sbjct: 351 LLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLE--- 407
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ W S++ V + + AL+ + M+ G+ D I AC + + R
Sbjct: 408 AKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQ--- 464
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
GQ +H+ V G+ +V I N L+ +YA+ G+ ++F LF+ + K+ I+WN M SGFA
Sbjct: 465 -GQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFA 523
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ + ALE+F +M G++ N T+ S +S+
Sbjct: 524 QSGLYEEALEVFIKMYQAGVKYNVFTFVSSISAS-------------------------- 557
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
A+LA GK IH VIK G V NALI +YGK G ++ A+ F E+
Sbjct: 558 ---------ANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEM 608
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
E+N VSWN +ITS ++ G EA+++F Q+ K +G +PN +++ V+ A + G
Sbjct: 609 SERNHVSWNTIITSCSQHGWGLEALDLFDQM-KQEG---LKPNDVTFIGVLAACSHVGLV 664
Query: 394 EEALDLFRKM 403
EE L F+ M
Sbjct: 665 EEGLGYFKSM 674
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 161/336 (47%), Gaps = 33/336 (9%)
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
++ N LI YA+ GL A VF QL D +SW A++ +A NG GEEA+
Sbjct: 78 IAGNLLIDLYAKKGLVQRARRVFEQLSARDN--------VSWVAMLSGYARNGLGEEAVG 129
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
L+ +M + VV +S +LS C ++A GR +H V + +V N L+ +Y+
Sbjct: 130 LYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYL 189
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
+ G L VF ++ D +T+N++IS + G GE+AL FEEM +G+ PD V +
Sbjct: 190 RFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIAS 249
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
+L+AC+ G +N+G+++ +++ + P ++DL + G++ EA +I K+
Sbjct: 250 LLAACASIGDLNKGKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGD-R 307
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
N +W +L + +G I++ S+ L + AA R +
Sbjct: 308 TNVVLWNLMLVA-----------------YGQISDLAKSFDLFCQMVAAGVRPNEFTYPC 350
Query: 639 ISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
+ L+ I + +IH+ S +SD+
Sbjct: 351 L------LRTCTYAGEINLGEQIHLLSIKTGFESDM 380
>gi|357486633|ref|XP_003613604.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514939|gb|AES96562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 198/619 (31%), Positives = 319/619 (51%), Gaps = 79/619 (12%)
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
V+NGLY+ AL LY + + FTFP++++AC + S S QI+H H+ + GF
Sbjct: 11 VANGLYKEALNLYSHLHSSSPTPNTFTFPILLKACSNLSSP----SQTQILHAHLFKTGF 66
Query: 168 QGNVHIVNELIGMYA-KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+ H LI YA + +LFD++ ++N + SG + N A+ LF+
Sbjct: 67 HSHPHTSTALIASYAANTRSFHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFR 126
Query: 227 RMELEGLEPNFVTWTSLLSS----------------------------------HARCGR 252
++ + PN VT SLLS+ +++CG
Sbjct: 127 QIGFWNIRPNSVTIVSLLSARDVKNQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGV 186
Query: 253 LEETMDLFDMMRKRGI--------------------------------EVGAEAIAVVLS 280
L + +F+ +R + + + + V+S
Sbjct: 187 LVSSNKVFENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVS 246
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
CA L+ +GK +HG +K D+V V +L+ +Y K G A ++FS E++N+++
Sbjct: 247 ACATLSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNLIT 306
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
WN++I + AVE+F ++ +D G + P+ +W+++I FA G EA F
Sbjct: 307 WNSMIAGMMMNSESERAVELFERM--VDEGIL--PDSATWNSLISGFAQKGVCVEAFKYF 362
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
KMQ A V ++ LLSVC +S L + IHG+ +R+ ++K+ + L++ YMKC
Sbjct: 363 SKMQCAGVAPCLKILTSLLSVCGDSCVLRSAKAIHGYALRICVDKDDFLATALVDTYMKC 422
Query: 461 GCLEEGHLVFEQIEKK--DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
GC+ VF+Q + K D WN+MI GYG NG E+A F EM++ +P+ FV+
Sbjct: 423 GCVSFARFVFDQFDVKPDDPAFWNAMIGGYGTNGDYESAFEVFYEMLDEMVQPNSATFVS 482
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
VLSACSH+G + G R F M+R++ ++P+ EH+ C+VDLLGRAG L EA D+V+ + E
Sbjct: 483 VLSACSHSGQIERGLRFF-RMIRKYGLDPKPEHFGCVVDLLGRAGQLGEARDLVQEL-AE 540
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
P A V+ +LL +CR + ++++ E MA ++ + + ++LSNIYAA GRW + ++R
Sbjct: 541 PPASVFDSLLGACRCYLDSNLGEEMAMKLIDIEPKNPAPLVVLSNIYAALGRWSEVERIR 600
Query: 639 ISAKTKGLKKVAGQSWIEV 657
KGL K +G S IEV
Sbjct: 601 GLITDKGLDKNSGISMIEV 619
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 177/366 (48%), Gaps = 14/366 (3%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
K ++QVH G +++ +++ Y++ G L + VFE + + +N
Sbjct: 150 KNQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVFENLRV---KNVVTYN 206
Query: 102 SILRVNVSNGLYENALKLYVKMR-KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
+ + + NG + ++ M L + T V+ AC + + R G+ VH
Sbjct: 207 AFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACATLSNIRL----GKQVHG 262
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
+++ +V +V L+ MY+K G +F +F + +N I+WN M +G +N + +
Sbjct: 263 LSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNLITWNSMIAGMMMNSESER 322
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
A+ELF+RM EG+ P+ TW SL+S A+ G E F M+ G+ + + +LS
Sbjct: 323 AVELFERMVDEGILPDSATWNSLISGFAQKGVCVEAFKYFSKMQCAGVAPCLKILTSLLS 382
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK--NI 338
VC D K IHG+ ++ + F+ AL+ Y K G V A+ +F + + K +
Sbjct: 383 VCGDSCVLRSAKAIHGYALRICVDKDDFLATALVDTYMKCGCVSFARFVFDQFDVKPDDP 442
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
WNA+I Y G + A EVF E LD M +PN ++ +V+ A + +G+ E L
Sbjct: 443 AFWNAMIGGYGTNGDYESAFEVF--YEMLD--EMVQPNSATFVSVLSACSHSGQIERGLR 498
Query: 399 LFRKMQ 404
FR ++
Sbjct: 499 FFRMIR 504
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 121/281 (43%), Gaps = 39/281 (13%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
++ C T+ + KQVH + A + ++ +Y++ G A +VF +
Sbjct: 244 VVSACATLSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRSE--- 300
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K + + WNS++ + N E A++L+ +M G+L D T+ +I G F
Sbjct: 301 KRNLITWNSMIAGMMMNSESERAVELFERMVDEGILPDSATWNSLISGFAQKGVCVEAFK 360
Query: 154 F-------------------------------GQIVHNHVLQMGFQGNVHIVNELIGMYA 182
+ + +H + L++ + + L+ Y
Sbjct: 361 YFSKMQCAGVAPCLKILTSLLSVCGDSCVLRSAKAIHGYALRICVDKDDFLATALVDTYM 420
Query: 183 KMGQMSDSFKLFDKVRVK--NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
K G +S + +FD+ VK + WN M G+ N D + A E+F M E ++PN T+
Sbjct: 421 KCGCVSFARFVFDQFDVKPDDPAFWNAMIGGYGTNGDYESAFEVFYEMLDEMVQPNSATF 480
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
S+LS+ + G++E + F M+RK G++ E V+ +
Sbjct: 481 VSVLSACSHSGQIERGLRFFRMIRKYGLDPKPEHFGCVVDL 521
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 207/702 (29%), Positives = 337/702 (48%), Gaps = 113/702 (16%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
ITY+ ++ C T +H ++ G + F+++ ++S+Y++ R+ +AR
Sbjct: 42 ITYSATISACAQSTRPSLAT-----SLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEAR 96
Query: 84 NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM----RKLGVLGDGFTFPLVI 139
+F+ P + + WNS++ GL E A L+ M +L FT V+
Sbjct: 97 FLFDDMP---ERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVL 153
Query: 140 RACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV 199
+AC +G R G+ VH + +++GF ++ + + MY K G + + FD++
Sbjct: 154 KACGGLGCSRI----GKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIEN 209
Query: 200 KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDL 259
K+ ++WN M +G+A N + A+ELF +MELEG +PN T+
Sbjct: 210 KDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTF------------------- 250
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
VL ++ +G+ H V+K G VFV AL+ +Y K
Sbjct: 251 ----------------CCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSK 294
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK------------- 366
D++ + F E+ ++N+VS+NALIT Y+ G +EA+ V+SQL+
Sbjct: 295 FYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGL 354
Query: 367 ----------LDGGSME--------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+G + +V ++++ ++ G + AL+ F +
Sbjct: 355 FSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNS 414
Query: 409 VANSVTISG----------LLSVC---------------------AESAALNIGREIHGH 437
V + ISG L+ C + AA+ GR +H H
Sbjct: 415 VCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAH 474
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
V++ ++ I V + +++MY KCG +E+ VF + +K++++WNSMI+GY NG + A
Sbjct: 475 VMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEA 534
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
L F+EM +G P V FV +L ACSHAGLV EGR +++MV + I P MEH CMVD
Sbjct: 535 LLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVD 594
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
LLGRAG L+EA + + +WG+LL++C +HKN+DV A L + S
Sbjct: 595 LLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSS 654
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKR 659
Y LSNIYA+ W + +++R K G++K G SWIE R
Sbjct: 655 YTALSNIYASKELWSEVSRIRDLMKDMGVEKEPGCSWIESLR 696
Score = 169 bits (427), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 199/439 (45%), Gaps = 75/439 (17%)
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
LE N V WTS ++ +AR G +++ + F M + GIE A + +S CA +
Sbjct: 2 LETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLAT 61
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+H ++K GF + +FV + LI +Y KH +K A+ LF ++ E++ VSWN++I Y++ G
Sbjct: 62 SLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRG 121
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
L +EA +F + + K++ +
Sbjct: 122 LNEEACGLF-----------------------------------CSMINSCENWKLLVSD 146
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
T++ +L C IG+ +HG+ V++ + ++ V + MY KCG L+ L F+Q
Sbjct: 147 FTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQ 206
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA---------- 522
IE KD++ WN+MI+GY N E A+ F +M GFKP+ F VL A
Sbjct: 207 IENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVG 266
Query: 523 -CSHAGLVNEG--------RRIFDMMVREFRIEP-----------QMEHYACMVDLLGRA 562
C HA ++ G + DM + + IE + + ++
Sbjct: 267 RCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLM 326
Query: 563 GLLQEASDIVKNMP---MEPNAYVWGTLLNSCRMHKNTDVAEAMASQI----FGLITETT 615
G +EA + + MEP+++ + L +SC + ++ VAE + FGL ++ +
Sbjct: 327 GKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSV--SSTVAEGAQVHVHSVKFGLDSDVS 384
Query: 616 GSYMLLSNIYAASGRWEDA 634
++ N Y+ G + A
Sbjct: 385 VGNSIV-NFYSKCGFTDSA 402
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 16/227 (7%)
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
M NV+ W++ I A G ++AL F +M A + N++T S +S CA+S ++
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
+H +++ + + V +GL++MY K ++E +F+ + ++D ++WNSMI+GY
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120
Query: 492 GLGENALATFEEMIEA----GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR-----E 542
GL E A F MI + VL AC G G+ + V+ +
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ + C +L AGL A D ++N + W T++
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGL---AFDQIEN----KDIVAWNTMIT 220
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 211/663 (31%), Positives = 338/663 (50%), Gaps = 60/663 (9%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVL--SIYARFGRLFDARNVFETAPFDCK 94
LL++C + Q KQ+ ++ F +R+L S + L A +F F
Sbjct: 37 LLEKCNSRTQFKQILGHMMRNNLVGQTFPMSRLLFFSAVSHPENLELAILLFNH--FTPY 94
Query: 95 SSSLLWNS-ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ ++N+ IL SN E A +Y M + G D TF +++ KF+ +
Sbjct: 95 PNLYIFNTMILGFPFSN---EKAFTIYRSMLQNGTYPDRQTFLYLLQTTKFVAEVK---- 147
Query: 154 FGQIVHNHVLQMGF-QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
+H H L G ++ N LI Y G
Sbjct: 148 ---QIHCHALVFGLLSKEEYLRNSLIKRYVDNG--------------------------- 177
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
F+C A +LF M + N V++ +++ A+ G + ++LF MR G+E
Sbjct: 178 --CFEC--ARQLFDEMS----DRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDD 229
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ +L +C L +GK +H + K + + NAL+ +Y K ++K+A+ +F
Sbjct: 230 FTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDG 289
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
EK+ VSWN +I YA+ G + A ++F+Q+ D ++SW+++I +A NG
Sbjct: 290 PMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRD--------IVSWNSLISGYAQNGD 341
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
LF +M V + VTI L+S AE AL+ GR IHG V++ +
Sbjct: 342 YVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSA 401
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++MY KCG +E ++F QI +KD+ TW +MI+G+ +G G AL F M +A KP+
Sbjct: 402 LIDMYCKCGSIERAFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVM-QAETKPN 460
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
V FV+VL+ACSH+GLV+EG +IF M + + IEP +EHY C+VDLL R+G L +A ++
Sbjct: 461 DVTFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVI 520
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
+ MPMEP+ +WG +L++CRMH+N ++AE ++ L E G Y+LLSN+YA GRW
Sbjct: 521 EKMPMEPSRSIWGAVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWS 580
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
+ +R ++G+KK+AG S + V +H F++ N ++C +L L +M +
Sbjct: 581 YSDSIREVMNSRGVKKIAGCSSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEA 640
Query: 693 CVP 695
VP
Sbjct: 641 DVP 643
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 187/372 (50%), Gaps = 17/372 (4%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTG-ANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
F +LLQ K + ++KQ+H +V G + +L ++ Y G AR +F+
Sbjct: 133 FLYLLQTTKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMS-- 190
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ + +N+++ G L+L+ MR G+ D FT ++ C +G +
Sbjct: 191 -DRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETK--- 246
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ VH + + N+ + N L+ MY K ++ + K+FD K+ +SWN + +G+
Sbjct: 247 -LGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGY 305
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
A + + A +LF ++ + V+W SL+S +A+ G LF M ++
Sbjct: 306 AKVGELELACDLFNQIPTR----DIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDK 361
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
I ++S A++ A G+ IHG +K + F +ALI +Y K G ++ A +F++
Sbjct: 362 VTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQ 421
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
I EK++ +W +IT +A G ++A+E+FS ++ + +PN +++ +V+ A + +G
Sbjct: 422 IPEKDVTTWTTMITGFAFHGFGNKALELFSVMQ-----AETKPNDVTFVSVLAACSHSGL 476
Query: 393 GEEALDLFRKMQ 404
+E L +F M+
Sbjct: 477 VDEGLKIFSSMK 488
>gi|293336045|ref|NP_001168520.1| uncharacterized protein LOC100382300 [Zea mays]
gi|195615774|gb|ACG29717.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
gi|223946951|gb|ACN27559.1| unknown [Zea mays]
Length = 616
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 190/566 (33%), Positives = 310/566 (54%), Gaps = 27/566 (4%)
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
PL+ RA MG G+ VH H+++ + + N L+ +Y+ + + + K F
Sbjct: 43 IPLLERAIS-MGDV---LHLGRAVHAHLVKTALTSHTLLSNRLVALYSSLPSPAAAVKAF 98
Query: 195 DKVRVKNYISWNMMFSGFALNFDC-DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
+ KN S+N + + D A LF M + N V++ +L+SS A GR
Sbjct: 99 YDLPHKNAHSYNTLLAALLRRPDTLPDAFRLFDTMPADSR--NLVSYNTLMSSLAHHGRQ 156
Query: 254 EETMDLF-DMMRKR----GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
E + + + R R G+ + + V + CA + A + +HG V+ G E V
Sbjct: 157 VEALRVVARLARDRFLGPGLAMDRFTVVSVATACAGIGAARPLREMHGAVVVSGMEFTVI 216
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
+ NA++ Y K V+ A++LF ++ ++ V+W ++I+ Y + EAV+VF + D
Sbjct: 217 MANAMLNAYSKARRVEDARHLFDQVSIRDNVTWTSMISGYCQVKKLHEAVQVFDMMPDKD 276
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
I+W+A+I NG + AL+LF +M V + L CA+ +
Sbjct: 277 R--------IAWTALISGHEQNGEEDTALELFEQMLAKGVSPTPFVLVSALGACAKLGLV 328
Query: 429 NIGREIHGHVVRVSMNK---NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMI 485
G+E+H ++R ++ NI + N L++MY KCG + VF+ + ++D I+WNSM+
Sbjct: 329 TRGKELHCFILRRNIGSVPFNIFIHNALVDMYSKCGDMMAAMAVFDWMPERDFISWNSMV 388
Query: 486 SGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRI 545
+G+ NGLG+ +LA FEEM+ AG +P V F+AVL+ACSH+GLV+ GR + + M + +
Sbjct: 389 TGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRLVLESM-EDHGV 447
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNMP--MEP-NAYVWGTLLNSCRMHKNTDVAEA 602
EP+ EHYA +D LGR L+EA++ +K++P + P A WG LL +CR+H N ++AE
Sbjct: 448 EPRAEHYAAFIDALGRNHQLEEATEFIKDLPSRIGPGTAGSWGALLGACRLHGNIELAEE 507
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
+A +F L +G Y+++SNIYAA+G+W+DA +VR K KGLKK SWIEV+ H
Sbjct: 508 VAEFLFRLEPGNSGRYVMMSNIYAAAGQWDDARRVRGLMKEKGLKKDQAYSWIEVRSAKH 567
Query: 663 MFSSGNSLQSDLKNVCEVLEELALQM 688
+F + + + + E+L +L M
Sbjct: 568 VFVADDISHCEADKIYEMLGKLLDHM 593
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 164/383 (42%), Gaps = 59/383 (15%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP---------------- 90
L+++H ++V+G + +A +L+ Y++ R+ DAR++F+
Sbjct: 199 LREMHGAVVVSGMEFTVIMANAMLNAYSKARRVEDARHLFDQVSIRDNVTWTSMISGYCQ 258
Query: 91 ----------FDC--KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLV 138
FD + W +++ + NG + AL+L+ +M GV F
Sbjct: 259 VKKLHEAVQVFDMMPDKDRIAWTALISGHEQNGEEDTALELFEQMLAKGVSPTPFVLVSA 318
Query: 139 IRACKFMGSFRFRFSFGQIVHNHVLQMGFQG---NVHIVNELIGMYAKMGQMSDSFKLFD 195
+ AC +G + G+ +H +L+ N+ I N L+ MY+K G M + +FD
Sbjct: 319 LGACAKLG----LVTRGKELHCFILRRNIGSVPFNIFIHNALVDMYSKCGDMMAAMAVFD 374
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
+ +++ISWN M +GF+ N +L +F+ M + G+ P VT+ ++L++ + G +
Sbjct: 375 WMPERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSN 434
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSV---------CADLAADHMGKVIHGFVIKGGFEDY 306
+ + M G+E AE A + + D ++ G G
Sbjct: 435 GRLVLESMEDHGVEPRAEHYAAFIDALGRNHQLEEATEFIKDLPSRIGPGTAGSWG---- 490
Query: 307 VFVKNALICVYGKHGDVKVAQNLFS---EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
AL+ HG++++A+ + +E N + + YA AG D+A V
Sbjct: 491 -----ALLGACRLHGNIELAEEVAEFLFRLEPGNSGRYVMMSNIYAAAGQWDDARRVRGL 545
Query: 364 LEKLDGGSMERPNVISWSAVIGA 386
+++ +++ SW V A
Sbjct: 546 MKE---KGLKKDQAYSWIEVRSA 565
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 174/529 (32%), Positives = 295/529 (55%), Gaps = 54/529 (10%)
Query: 175 NELIGMYAKM-GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL 233
N ++ Y K+ G++ ++ +LFDK+ + +S+N+M + ++ + AL F +M ++
Sbjct: 108 NTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVK-- 165
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMM-RKRGIEVGAEAIAVVLSVCADLAADHMGK 292
+ +W +L+S A+ G++++ DLF +M K G+
Sbjct: 166 --DIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSW---------------------- 201
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+A+I Y +HGD++ A+ L+ + K++V A++T Y + G
Sbjct: 202 ------------------SAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFG 243
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+ A +F + M N+++W+++I + N R E+ L +F+ M ++V N
Sbjct: 244 KVELAERIFQR--------MAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNP 295
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
+++S +L C+ +AL +GR++H V + ++K+ L++MY KCG L+ +F +
Sbjct: 296 LSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLE 355
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+ +KD+I+WN+MISGY +G G AL F++M KPD + FVAV+ AC+HAG V+ G
Sbjct: 356 MPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLG 415
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
+ F M +EF IE + HY C++DLLGRAG L EA ++K MP +P+A ++GTLL +CR
Sbjct: 416 VQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACR 475
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
+HKN D+AE A + L + Y+ L+NIYAA+ +W+ AKVR K + K+ G
Sbjct: 476 IHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGY 535
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
SWIE+K H F S + L +L ++ + L EL +M+ G VPD + L
Sbjct: 536 SWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFAL 584
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 170/395 (43%), Gaps = 93/395 (23%)
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR-CGRLEETMDL 259
+ +S N + F D + A +F++M + VTW ++LS + + G+++E +L
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVR----TTVTWNTMLSGYTKVAGKVKEAHEL 127
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
FD + + D V L+C
Sbjct: 128 FDKIPE--------------------------------------PDSVSYNIMLVCYLRS 149
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
+G V+ A F+++ K+I SWN LI+ +A+ G +A ++FS + + +G +S
Sbjct: 150 YG-VEAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNG--------VS 200
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVV 439
WSA+I + +G E A +L++ N+G +
Sbjct: 201 WSAMISGYVEHGDLEAAEELYK---------------------------NVGMK------ 227
Query: 440 RVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
+++V+ +L YMK G +E +F+++ K+L+TWNSMI+GY N E+ L
Sbjct: 228 ------SVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLK 281
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
F+ MIE+ +P+ ++ +VL CS+ + GR++ +V + + ++ +
Sbjct: 282 VFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQ-LVSKSPLSKDTTACTSLISMY 340
Query: 560 GRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+ G L A + MP + + W +++ H
Sbjct: 341 CKCGDLDSAWKLFLEMPRK-DVISWNAMISGYAQH 374
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 163/364 (44%), Gaps = 26/364 (7%)
Query: 62 SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYV 121
S + +L+ Y +FG++ A +F+ + + WNS++ V N E+ LK++
Sbjct: 228 SVVVETAMLTGYMKFGKVELAERIFQRMAV---KNLVTWNSMIAGYVENCRAEDGLKVFK 284
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
M + V + + V+ C + + G+ +H V + + LI MY
Sbjct: 285 TMIESRVRPNPLSLSSVLLGCSNLSAL----PLGRQMHQLVSKSPLSKDTTACTSLISMY 340
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
K G + ++KLF ++ K+ ISWN M SG+A + AL LF +M ++P+++T+
Sbjct: 341 CKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFV 400
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL--AADHMGKVIHGFVI 299
+++ + G ++ + F M+K E G EA V + DL A + + + +
Sbjct: 401 AVILACNHAGFVDLGVQYFKSMKK---EFGIEAKPVHYTCVIDLLGRAGRLDEAV-SLIK 456
Query: 300 KGGFEDYVFVKNALI--CVYGKHGDVK--VAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
+ F+ + + L+ C K+ D+ A+NL + ++ + + L YA D
Sbjct: 457 EMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLN-LDPTSATGYVQLANIYAATNKWD 515
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL--------DLFRKMQLAK 407
+ +V +++ + + + I +V F S+ R L +L KM+LA
Sbjct: 516 QVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAG 575
Query: 408 VVAN 411
V +
Sbjct: 576 YVPD 579
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG-MNGLGENA 497
+ V +++ N + +++ LE VFE++ + +TWN+M+SGY + G + A
Sbjct: 65 LHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEA 124
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
F+++ E PD V++ +L + V F+ M + + + ++
Sbjct: 125 HELFDKIPE----PDSVSYNIMLVCYLRSYGVEAALAFFNKMPVK-----DIASWNTLIS 175
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
+ G +Q+A D+ MP E N W +++ H + + AE + + G+ + +
Sbjct: 176 GFAQNGQMQKAFDLFSVMP-EKNGVSWSAMISGYVEHGDLEAAEELYKNV-GMKSVVVET 233
Query: 618 YMLLSNIYAASGRWEDAAKV 637
ML Y G+ E A ++
Sbjct: 234 AMLTG--YMKFGKVELAERI 251
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/529 (33%), Positives = 293/529 (55%), Gaps = 54/529 (10%)
Query: 175 NELIGMYAKM-GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL 233
N ++ Y K+ G++ ++ +LFDK+ + +S+N+M + ++ AL F +M ++
Sbjct: 108 NTMLSGYTKVAGKVKEAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVK-- 165
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMM-RKRGIEVGAEAIAVVLSVCADLAADHMGK 292
+ +W +L+S A+ G++++ DLF +M K G+
Sbjct: 166 --DIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSW---------------------- 201
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+A+I Y +HGD++ A+ L+ + K++V A++T Y + G
Sbjct: 202 ------------------SAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYMKFG 243
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+ A +F + M N+++W+++I + N R E+ L +F+ M ++V N
Sbjct: 244 KVELAERIFQR--------MAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNP 295
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
+++S +L C+ +AL +GR++H V + ++K+ L++MY KCG L+ +F +
Sbjct: 296 LSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLE 355
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+ +KD+ITWN+MISGY +G G AL F++M KPD + FVAV+ AC+HAG V+ G
Sbjct: 356 MPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLG 415
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
+ F M +EF IE + HY C++DLLGRAG L EA ++K MP P+A ++GTLL +CR
Sbjct: 416 VQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACR 475
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
+HKN D+AE A + L + Y+ L+NIYAA+ +W+ AKVR K + K+ G
Sbjct: 476 IHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGY 535
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
SWIE+K H F S + L +L ++ + L EL +M+ G VPD + L
Sbjct: 536 SWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFAL 584
Score = 113 bits (282), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 170/395 (43%), Gaps = 93/395 (23%)
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR-CGRLEETMDL 259
+ +S N + F D + A +F++M + VTW ++LS + + G+++E +L
Sbjct: 72 DVVSLNKTIASFVRACDLESARNVFEKMSVR----TTVTWNTMLSGYTKVAGKVKEAHEL 127
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
FD + + D V L+C
Sbjct: 128 FDKIPE--------------------------------------PDSVSYNIMLVCYLRS 149
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
+G VK A F+++ K+I SWN LI+ +A+ G +A ++FS + + +G +S
Sbjct: 150 YG-VKAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNG--------VS 200
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVV 439
WSA+I + +G E A +L++ N+G +
Sbjct: 201 WSAMISGYVEHGDLEAAEELYK---------------------------NVGMK------ 227
Query: 440 RVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
+++V+ +L YMK G +E +F+++ K+L+TWNSMI+GY N E+ L
Sbjct: 228 ------SVVVETAMLTGYMKFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLK 281
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
F+ MIE+ +P+ ++ +VL CS+ + GR++ +V + + ++ +
Sbjct: 282 VFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQ-LVSKSPLSKDTTACTSLISMY 340
Query: 560 GRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+ G L A + MP + + W +++ H
Sbjct: 341 CKCGDLDSAWKLFLEMPRK-DVITWNAMISGYAQH 374
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 165/369 (44%), Gaps = 36/369 (9%)
Query: 62 SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYV 121
S + +L+ Y +FG++ A +F+ + + WNS++ V N E+ LK++
Sbjct: 228 SVVVETAMLTGYMKFGKVELAERIFQRMAV---KNLVTWNSMIAGYVENCRAEDGLKVFK 284
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
M + V + + V+ C + + G+ +H V + + LI MY
Sbjct: 285 TMIESRVRPNPLSLSSVLLGCSNLSAL----PLGRQMHQLVSKSPLSKDTTACTSLISMY 340
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
K G + ++KLF ++ K+ I+WN M SG+A + AL LF +M ++P+++T+
Sbjct: 341 CKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFV 400
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
+++ + G ++ + F M+K E G EA V + DL G++ +
Sbjct: 401 AVILACNHAGFVDLGVQYFKSMKK---EFGIEAKPVHYTCVIDLLG-RAGRLDEAVSL-- 454
Query: 302 GFEDYVFVKNALICVYGK-HGDVKVAQNL-FSEIEEKNIVSWNAL-ITSYAEAGLCDEAV 358
++ F +A I YG G ++ +NL +E +N+++ + T Y + A
Sbjct: 455 -IKEMPFTPHAAI--YGTLLGACRIHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAAT 511
Query: 359 EVFSQLEKLDGGSMERPNVI-----SW---SAVIGAFASNGRGEEAL--------DLFRK 402
+ Q+ K+ M+ NV+ SW +V F S+ R L +L K
Sbjct: 512 NKWDQVAKVR-KMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELTSIHKKLNELDGK 570
Query: 403 MQLAKVVAN 411
M+LA V +
Sbjct: 571 MKLAGYVPD 579
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG-MNGLGENA 497
+ V +++ N + +++ LE VFE++ + +TWN+M+SGY + G + A
Sbjct: 65 LHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEA 124
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
F+++ E PD V++ +L + V F+ M + + + ++
Sbjct: 125 HELFDKIPE----PDSVSYNIMLVCYLRSYGVKAALAFFNKMPVK-----DIASWNTLIS 175
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
+ G +Q+A D+ MP E N W +++ H + + AE + + G+ + +
Sbjct: 176 GFAQNGQMQKAFDLFSVMP-EKNGVSWSAMISGYVEHGDLEAAEELYKNV-GMKSVVVET 233
Query: 618 YMLLSNIYAASGRWEDAAKV 637
ML Y G+ E A ++
Sbjct: 234 AMLTG--YMKFGKVELAERI 251
>gi|358345892|ref|XP_003637008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502943|gb|AES84146.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 201/617 (32%), Positives = 322/617 (52%), Gaps = 87/617 (14%)
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMR-KLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
S+ WNSI+ V + +A+ L+ +M G+L D ++ F+G F
Sbjct: 23 SVSWNSIVSVYSHCFVPNDAVFLFREMTVGYGILPDTVGVVNILPVSGFLGFF------- 75
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ N L+ MYAK G+M D+ K+F+++R K+ ++WN M +G++ N
Sbjct: 76 -----------------VGNALVDMYAKCGKMEDASKVFERMRFKDVVTWNAMVTGYSQN 118
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
+ AL LF +M E +E + VTW+S++S +A+ G E MD+F M +
Sbjct: 119 GRFEDALSLFGKMREEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTL 178
Query: 276 AVVLSVCADLAADHMGKVIH----GFVIKGGFEDY---VFVKNALICVYGKHGDVKVAQN 328
+LS CA + A GK H F++KG D + V NALI +Y K ++VA+
Sbjct: 179 MSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARA 238
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+F EI K+ +V++W+ +IG +A
Sbjct: 239 MFDEICPKD-------------------------------------RDVVTWTVMIGGYA 261
Query: 389 SNGRGEEALDLFRKMQLAK--VVANSVTISGLLSVCAESAALNIGREIHGHVVRVS-MNK 445
+G AL LF +M +V N TIS +L CA AAL G++IH +V+R S ++
Sbjct: 262 QHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDS 321
Query: 446 NIL-VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
++L V N L++MY K G ++ +VF+ + K++ ++W S+++GYGM+G
Sbjct: 322 DVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHG------------ 369
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
A DG+ F+ VL ACSH+G+V+ G +F M ++F ++P +EHYACM DL GRAG
Sbjct: 370 --AALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGR 427
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNI 624
L EA+ ++ +M MEP VW LL++CR H N ++AE A ++ L + G+Y LLSNI
Sbjct: 428 LCEATRLINDMSMEPTPVVWIALLSACRTHSNEELAEFAAKKLLELKADNDGTYTLLSNI 487
Query: 625 YAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
YA + RW+D A++R K G+KK G SW++ ++ + F G+ + + E L +L
Sbjct: 488 YANARRWKDVARIRYLMKRTGIKKRPGWSWVKGRKGMETFYVGDRTHLQSQKIYETLADL 547
Query: 685 ALQMENKGCVPDNDIIL 701
+++ G VP + L
Sbjct: 548 IKRIKAIGYVPQTNFSL 564
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 177/424 (41%), Gaps = 109/424 (25%)
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM 123
F+ ++ +YA+ G++ DA VFE F + WN+++ NG +E+AL L+ KM
Sbjct: 75 FVGNALVDMYAKCGKMEDASKVFERMRF---KDVVTWNAMVTGYSQNGRFEDALSLFGKM 131
Query: 124 RKLGVLGDGFTFPLVIR-------ACKFMGSFRFRF-------------------SFGQI 157
R+ + D T+ VI C+ M FR S G +
Sbjct: 132 REEKIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGAL 191
Query: 158 VH---NHVLQMGF---------QGNVHIVNELIGMYAKMGQMSDSFKLFDKV--RVKNYI 203
+H H + F ++ ++N LI MYAK + + +FD++ + ++ +
Sbjct: 192 LHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVV 251
Query: 204 SWNMMFSGFALNFDCDGALELFKRM-ELEG-LEPNFVTWTSLLSSHARCGRLEETMDLFD 261
+W +M G+A + D + AL+LF M +++ + PN T
Sbjct: 252 TWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFT---------------------- 289
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF--EDYVFVKNALICVYGK 319
I+ VL CA LAA GK IH +V++ D +FV N LI +Y K
Sbjct: 290 -------------ISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSK 336
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSY---------------------AEAGLCDEAV 358
GDV AQ +F + ++N VSW +L+T Y + +G+ D +
Sbjct: 337 SGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGAALVLDGITFLVVLYACSHSGMVDRGI 396
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
++F ++ K + P V ++ + F GR EA L M + V L
Sbjct: 397 DLFYRMSK---DFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSME---PTPVVWIAL 450
Query: 419 LSVC 422
LS C
Sbjct: 451 LSAC 454
>gi|223948849|gb|ACN28508.1| unknown [Zea mays]
gi|413937254|gb|AFW71805.1| hypothetical protein ZEAMMB73_337002 [Zea mays]
Length = 608
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 190/566 (33%), Positives = 310/566 (54%), Gaps = 27/566 (4%)
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
PL+ RA MG G+ VH H+++ + + N L+ +Y+ + + + K F
Sbjct: 35 IPLLERAIS-MGDV---LHLGRAVHAHLVKTALTSHTLLSNRLVALYSSLPSPAAAVKAF 90
Query: 195 DKVRVKNYISWNMMFSGFALNFDC-DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
+ KN S+N + + D A LF M + N V++ +L+SS A GR
Sbjct: 91 YDLPHKNAHSYNTLLAALLRRPDTLPDAFRLFDTMPADSR--NLVSYNTLMSSLAHHGRQ 148
Query: 254 EETMDLF-DMMRKR----GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
E + + + R R G+ + + V + CA + A + +HG V+ G E V
Sbjct: 149 VEALRVVARLARDRFLGPGLAMDRFTVVSVATACAGIGAARPLREMHGAVVVSGMEFTVI 208
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
+ NA++ Y K V+ A++LF ++ ++ V+W ++I+ Y + EAV+VF + D
Sbjct: 209 MANAMLNAYSKARRVEDARHLFDQVSIRDNVTWTSMISGYCQVKKLHEAVQVFDMMPDKD 268
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
I+W+A+I NG + AL+LF +M V + L CA+ +
Sbjct: 269 R--------IAWTALISGHEQNGEEDTALELFEQMLAKGVSPTPFVLVSALGACAKLGLV 320
Query: 429 NIGREIHGHVVRVSMNK---NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMI 485
G+E+H ++R ++ NI + N L++MY KCG + VF+ + ++D I+WNSM+
Sbjct: 321 TRGKELHCFILRRNIGSVPFNIFIHNALVDMYSKCGDMMAAMAVFDWMPERDFISWNSMV 380
Query: 486 SGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRI 545
+G+ NGLG+ +LA FEEM+ AG +P V F+AVL+ACSH+GLV+ GR + + M + +
Sbjct: 381 TGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSNGRLVLESM-EDHGV 439
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNMP--MEP-NAYVWGTLLNSCRMHKNTDVAEA 602
EP+ EHYA +D LGR L+EA++ +K++P + P A WG LL +CR+H N ++AE
Sbjct: 440 EPRAEHYAAFIDALGRNHQLEEATEFIKDLPSRIGPGTAGSWGALLGACRLHGNIELAEE 499
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
+A +F L +G Y+++SNIYAA+G+W+DA +VR K KGLKK SWIEV+ H
Sbjct: 500 VAEFLFRLEPGNSGRYVMMSNIYAAAGQWDDARRVRGLMKEKGLKKDQAYSWIEVRSAKH 559
Query: 663 MFSSGNSLQSDLKNVCEVLEELALQM 688
+F + + + + E+L +L M
Sbjct: 560 VFVADDISHCEADKIYEMLGKLLDHM 585
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 164/383 (42%), Gaps = 59/383 (15%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP---------------- 90
L+++H ++V+G + +A +L+ Y++ R+ DAR++F+
Sbjct: 191 LREMHGAVVVSGMEFTVIMANAMLNAYSKARRVEDARHLFDQVSIRDNVTWTSMISGYCQ 250
Query: 91 ----------FDC--KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLV 138
FD + W +++ + NG + AL+L+ +M GV F
Sbjct: 251 VKKLHEAVQVFDMMPDKDRIAWTALISGHEQNGEEDTALELFEQMLAKGVSPTPFVLVSA 310
Query: 139 IRACKFMGSFRFRFSFGQIVHNHVLQMGFQG---NVHIVNELIGMYAKMGQMSDSFKLFD 195
+ AC +G + G+ +H +L+ N+ I N L+ MY+K G M + +FD
Sbjct: 311 LGACAKLG----LVTRGKELHCFILRRNIGSVPFNIFIHNALVDMYSKCGDMMAAMAVFD 366
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
+ +++ISWN M +GF+ N +L +F+ M + G+ P VT+ ++L++ + G +
Sbjct: 367 WMPERDFISWNSMVTGFSHNGLGKQSLAIFEEMLVAGVRPTHVTFLAVLTACSHSGLVSN 426
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSV---------CADLAADHMGKVIHGFVIKGGFEDY 306
+ + M G+E AE A + + D ++ G G
Sbjct: 427 GRLVLESMEDHGVEPRAEHYAAFIDALGRNHQLEEATEFIKDLPSRIGPGTAGSWG---- 482
Query: 307 VFVKNALICVYGKHGDVKVAQNLFS---EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
AL+ HG++++A+ + +E N + + YA AG D+A V
Sbjct: 483 -----ALLGACRLHGNIELAEEVAEFLFRLEPGNSGRYVMMSNIYAAAGQWDDARRVRGL 537
Query: 364 LEKLDGGSMERPNVISWSAVIGA 386
+++ +++ SW V A
Sbjct: 538 MKE---KGLKKDQAYSWIEVRSA 557
>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
Length = 1008
Score = 326 bits (835), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 195/656 (29%), Positives = 335/656 (51%), Gaps = 57/656 (8%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS Y+ G L A+++F ++P ++ W ++R + + G +AL L+ M GV
Sbjct: 294 ILSAYSSSGDLPAAQHLFLSSP---HRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGV 350
Query: 129 LGDGFTFPLVIR--ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ 186
+ D T V+ C F FG H V + N L+ Y K G
Sbjct: 351 IPDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTH-----------VFVCNTLLDAYCKHGL 399
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL--EP--------- 235
++ + ++F ++ K+ +++N M G + AL+LF M G P
Sbjct: 400 LAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGYSRHPLHLLQYSHS 459
Query: 236 --------NFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCADLA 286
N SLL +++C L++ LFD M +R + A + CA
Sbjct: 460 RSRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCA--- 516
Query: 287 ADHMGKVIHGF--VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS---- 340
V+ F + K GF+ V ++ V G DV + + + +++ + S
Sbjct: 517 ----ATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLL 572
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
NALI Y++ G+ D A FS + + ISW+A+I + NG+ EEAL LF
Sbjct: 573 GNALIDMYSKCGMLDAAKSNFSNRSE--------KSAISWTALITGYVQNGQHEEALQLF 624
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
M+ A + + T S ++ + A + +GR++H +++R ++ + L++MY KC
Sbjct: 625 SDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKC 684
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
GCL+E F+++ +++ I+WN++IS Y G +NA+ FE M+ GF PD V F++VL
Sbjct: 685 GCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVL 744
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
+ACSH GL +E + F +M ++ I P EHYAC++D LGR G + ++ MP + +
Sbjct: 745 AACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKAD 804
Query: 581 AYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRIS 640
+W ++L+SCR+H N ++A A ++FG+ Y++LSNIYA +G+WEDAA V+
Sbjct: 805 PIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKI 864
Query: 641 AKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
+ +G++K +G SW+E+K+KI+ F+S + + + + L+ L +M+ +G PD
Sbjct: 865 MRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPD 920
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 192/646 (29%), Positives = 329/646 (50%), Gaps = 98/646 (15%)
Query: 19 RPFSIITYNNSL--LDCFDH------LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVL 70
R ++ +T+ + L L FD LL+ C T L+QVH ++I G + F+ ++ L
Sbjct: 5 RRYTALTFPDYLPTLRSFDTTSSISTLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFL 64
Query: 71 SIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG 130
++ +VF S++LWN+ ++ N + L+++M++ +
Sbjct: 65 TLCNSLSNFSYTTSVFNGVS---SPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVP 121
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
D FT+P +I+AC + + +F H ++ G G+V ++ LI +Y K G++ +
Sbjct: 122 DKFTYPSLIKACSKVCGVKEGVAF----HGSAVRCGVGGDVFVMTSLIDLYGKCGEILCA 177
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
K+FD++ +N +SW M +G+A D A +LF M E N V+W +++S + +C
Sbjct: 178 RKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMP----EKNAVSWNAIISGYVKC 233
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
G L +FD M R + V +I G
Sbjct: 234 GDLRSARKMFDEMPHRNV------------------------VSFTTMIDG--------- 260
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
Y K GD+ A+ +F E E+++V+W+ALI+ Y + G +EAV++F +
Sbjct: 261 ------YAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLE------- 307
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
M V + + L+S C++ +L +
Sbjct: 308 --------------------------------MCSRNVKPDEFIMVSLMSACSQMGSLEL 335
Query: 431 GREIHGHVVRVSMN-KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
+ + +V + S++ V L++M KCG ++ +FE++ K+DLI++ SM+ G
Sbjct: 336 AKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLS 395
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
++G G A++ F M+ G PD VAF +L+ACS AGLV+EG F+ M ++ I P
Sbjct: 396 IHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSP 455
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
+HYACMVDLLGRAG L+EA +++K+MP+EP+A WG LL +C++H + ++ E +A Q+F
Sbjct: 456 DHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFE 515
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
L + G+Y+LLSNIYAA+ +W D + +R + +G++K+ G SWI
Sbjct: 516 LEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 561
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 200/670 (29%), Positives = 334/670 (49%), Gaps = 91/670 (13%)
Query: 38 LQQCK---TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCK 94
LQ C + + K++H L+ S ++++Y++ + + VF P
Sbjct: 36 LQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNF-PTHHN 94
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
+ +N+++ ++N L + AL LY +MR LG+ D FTFP VIRAC G F
Sbjct: 95 KNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRAC---GDDDDGFVV 151
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
+I H + ++G + +V + + L+ Y K + +++++F+++ V++ + WN M +GF
Sbjct: 152 TKI-HGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGF-- 208
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
A+ GR EE + +F M G+
Sbjct: 209 ---------------------------------AQIGRFEEALGVFRRMGGNGVVPCRYT 235
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ VLS+ + + G+ +HGFV K G+E V V NAL
Sbjct: 236 VTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNAL--------------------- 274
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
I Y + +A+ VF ++++D + SW++++ G
Sbjct: 275 ----------IDMYGKCKCVGDALSVFEMMDEID--------IFSWNSIMSVHERCGDHY 316
Query: 395 EALDLF-RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK-------- 445
L LF R M ++V + VT++ +L C AAL GREIHG++V + K
Sbjct: 317 GTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFD 376
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
++L+ N L++MY KCG + + +VF + +KD+ +WN MI+GYGM+G G AL F M
Sbjct: 377 DVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMC 436
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
+A P+ ++FV +LSACSHAG+V EG M ++ + P +EHY C++D+L RAG L
Sbjct: 437 QAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQL 496
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
EA D+V MP + + W +LL +CR+H +TD+AE AS++ L + G+Y+L+SN+Y
Sbjct: 497 MEAYDLVLTMPFKADPVGWRSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVY 556
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
GR+E+ + R + K + +KK G SWIE+ +H+F +G+ + + L L
Sbjct: 557 GVVGRYEEVLEWRYTMKQQNVKKRPGCSWIELVNGVHVFITGDRTHPQTEYIYAGLNSLT 616
Query: 686 LQMENKGCVP 695
++ G VP
Sbjct: 617 AVLQEHGYVP 626
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV--FE 471
T L CA +A L+ G+E+H H+++ + + L L+NMY KC ++ V F
Sbjct: 31 TCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFP 90
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
K++ +N++I+G+ N L + ALA + +M G PD F V+ AC G ++
Sbjct: 91 THHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRAC---GDDDD 147
Query: 532 GRRIFDMMVREFRIEPQMEHY--ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
G + + F++ +++ + + +V+ + + EA + + +P+ + +W ++N
Sbjct: 148 GFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVR-DVVLWNAMVN 206
>gi|147765658|emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
Length = 1849
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 207/698 (29%), Positives = 351/698 (50%), Gaps = 89/698 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRL-FDARNVFETAPFDCKSSSLLWNSILRV 106
K VH+ +I +G + ++S+YA+ G + DA F F + WN+++
Sbjct: 1093 KSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEF---KDVVSWNAVIAG 1149
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ-M 165
N E A KL+ M K + + T ++ C + + +G+ VH HVL+ M
Sbjct: 1150 FSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEE-NAGYRYGKEVHCHVLRRM 1208
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
+V ++N L+ Y ++ QM + LF ++ ++ +SWN + +G+A N + ALELF
Sbjct: 1209 ELVEDVSVINSLMSFYLRIXQMEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELF 1268
Query: 226 KR-MELEGLEPNFVTWTS------------------------------------LLSSHA 248
+ LE ++P+ VT S LLS +A
Sbjct: 1269 SEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYA 1328
Query: 249 RCGRLEETMDLFDM-------------------------------MRKRGIEVGAEAIAV 277
+C + + F M M + GI + I
Sbjct: 1329 KCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILT 1388
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGF---EDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
++ A ++ K H + I+ G + + N ++ Y K G++K A N+F +
Sbjct: 1389 IIQYYAAVSRVKKVKETHSYSIRFGLLQGDAXPTLGNGMLDAYAKCGNMKYAVNIFGSLS 1448
Query: 335 EK-NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
EK N+V+ N++I+ Y + D+A +F+ + + D + +W+ ++ +A N
Sbjct: 1449 EKRNVVTCNSMISGYVTSSSHDDAYAIFNTMSETD--------LTTWNLMVRVYAENDFP 1500
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
++AL LF ++Q + + VTI +L CA A++++ R+ HG+V+R N ++ +
Sbjct: 1501 DQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFN-DVRLNGAF 1559
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY KCG + + +F +KDL+ + +M+ G+ M+G+GE AL F M+E G KPD
Sbjct: 1560 IDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDH 1619
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
V AVL ACSHAGLV+EG +IF+ + + +P ME YAC+VDLL R G +++A V
Sbjct: 1620 VIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVT 1679
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
MP+E NA +WGTLL +CR H ++ +A +F + ++ G+Y+++SN+YAA RW+
Sbjct: 1680 RMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWDG 1739
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHM--FSSGNS 669
++R +T+ LKK AG SWIEV R+ +M F GN+
Sbjct: 1740 VMEIRRLMRTRELKKPAGCSWIEVGRRKNMGSFQKGNA 1777
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 204/440 (46%), Gaps = 91/440 (20%)
Query: 113 YENALKLYVKMRK--LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN 170
++ AL L+++ + +G +G ++++C + RF G ++H + L++G
Sbjct: 950 HDEALSLFLERVRCSVGYKPNGQILAALLKSCVAXSAIRF----GSVLHGYALKLGHVSC 1005
Query: 171 VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA--LELFKRM 228
+ L+ +YAK G + KLF ++ ++ + WN++ SG A F A + LF+ M
Sbjct: 1006 QSLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLA-GFQSHEAEVMRLFRAM 1064
Query: 229 EL-EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
+ +PN VT IA+VL VCA L
Sbjct: 1065 HMVNEAKPNSVT-----------------------------------IAIVLPVCARLRE 1089
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
D GK +H +VIK G E + NALI +
Sbjct: 1090 D-AGKSVHSYVIKSGLESHTLAGNALISM------------------------------- 1117
Query: 348 YAEAGL-CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
YA+ GL C +A F+++E D V+SW+AVI F+ N EEA LF M
Sbjct: 1118 YAKCGLVCSDAYAAFNRIEFKD--------VVSWNAVIAGFSENKFTEEAFKLFHAMLKG 1169
Query: 407 KVVANSVTISGLLSVCA---ESAALNIGREIHGHVVR-VSMNKNILVQNGLLNMYMKCGC 462
+ N TI+ +L VCA E+A G+E+H HV+R + + +++ V N L++ Y++
Sbjct: 1170 PIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIXQ 1229
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE-AGFKPDGVAFVAVLS 521
+E+ +F ++ +DL++WN++I+GY NG AL F E I KPD V V+VL
Sbjct: 1230 MEKAEFLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLP 1289
Query: 522 ACSHAGLVNEGRRIFDMMVR 541
AC+H + + I ++R
Sbjct: 1290 ACAHVHNLQVAKGIHGYIIR 1309
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 140/612 (22%), Positives = 265/612 (43%), Gaps = 102/612 (16%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H + G + L +L++YA+ G L +F D + ++WN +L
Sbjct: 993 LHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLF--GEMD-QRDPVIWNIVLSGLAG 1049
Query: 110 NGLYE-NALKLYVKMRKLG-VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+E ++L+ M + + T +V+ C R R G+ VH++V++ G
Sbjct: 1050 FQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCA-----RLREDAGKSVHSYVIKSGL 1104
Query: 168 QGNVHIVNELIGMYAKMGQM-SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+ + N LI MYAK G + SD++ F+++ K+ +SWN + +GF+ N + A +LF
Sbjct: 1105 ESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFH 1164
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL- 285
M ++PN+ T IA +L VCA L
Sbjct: 1165 AMLKGPIQPNYAT-----------------------------------IASILPVCASLE 1189
Query: 286 --AADHMGKVIHGFVIKGG--FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
A GK +H V++ ED V V N+L+ Y + ++ A+ LF ++ +++VSW
Sbjct: 1190 ENAGYRYGKEVHCHVLRRMELVED-VSVINSLMSFYLRIXQMEKAEFLFRNMKSRDLVSW 1248
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
NA+I YA G +A+E+FS+
Sbjct: 1249 NAIIAGYASNGEWLKALELFSEF------------------------------------- 1271
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR-VSMNKNILVQNGLLNMYMKC 460
+ L + +SVT+ +L CA L + + IHG+++R + ++ V N LL+ Y KC
Sbjct: 1272 -ISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKC 1330
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
+ F I +KDLI+WN+++ + +G + + M+ G +PD + + ++
Sbjct: 1331 NYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTII 1390
Query: 521 SACSHAGLVNEGRRIFDMMVR----EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
+ V + + +R + P + + M+D + G ++ A +I ++
Sbjct: 1391 QYYAAVSRVKKVKETHSYSIRFGLLQGDAXPTLGN--GMLDAYAKCGNMKYAVNIFGSLS 1448
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETT-GSYMLLSNIYAASGRWEDAA 635
+ N ++++ + D A A IF ++ET ++ L+ +YA + + A
Sbjct: 1449 EKRNVVTCNSMISGYVTSSSHDDAYA----IFNTMSETDLTTWNLMVRVYAENDFPDQAL 1504
Query: 636 KVRISAKTKGLK 647
+ + +G+K
Sbjct: 1505 SLFHELQGQGMK 1516
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 52/299 (17%)
Query: 232 GLEPNFVTWTS-LLSSHARCGRLEETMDLFDMMRKR---GIEVGAEAIAVVLSVCADLAA 287
GLE F S L+ H +E + LF + R R G + + +A +L C +A
Sbjct: 934 GLEKEFDDELSKLMEKH------DEALSLF-LERVRCSVGYKPNGQILAALLKSCVAXSA 986
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
G V+HG+ +K G + L+ +Y K G + LF E+++++ V WN +++
Sbjct: 987 IRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSG 1046
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA- 406
AG EV + LFR M +
Sbjct: 1047 L--AGFQSHEAEV------------------------------------MRLFRAMHMVN 1068
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL-EE 465
+ NSVTI+ +L VCA + G+ +H +V++ + + L N L++MY KCG + +
Sbjct: 1069 EAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSD 1127
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
+ F +IE KD+++WN++I+G+ N E A F M++ +P+ ++L C+
Sbjct: 1128 AYAAFNRIEFKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCA 1186
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 164/377 (43%), Gaps = 49/377 (12%)
Query: 44 IHQLKQVHNQLIVTG---ANASAFLAARVLSIYAR----------FGRLFDARNVFET-- 88
+ ++K+ H+ I G +A L +L YA+ FG L + RNV
Sbjct: 1399 VKKVKETHSYSIRFGLLQGDAXPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNS 1458
Query: 89 ---------------APFDCKSSSLL--WNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
A F+ S + L WN ++RV N + AL L+ +++ G+ D
Sbjct: 1459 MISGYVTSSSHDDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPD 1518
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
T ++ AC M S + H +V++ F +V + I MY+K G + ++
Sbjct: 1519 IVTIMSILPACAHMASVHML----RQCHGYVIRACFN-DVRLNGAFIDMYSKCGSVFGAY 1573
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
KLF K+ + + M GFA++ + AL +F M G++P+ V T++L + + G
Sbjct: 1574 KLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAG 1633
Query: 252 RLEETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
++E +F+ + K G + E A V+ + LA K + FV + E +
Sbjct: 1634 LVDEGWKIFNSIEKVHGFQPTMEQYACVVDL---LARGGRIKDAYTFVTRMPIEANANIW 1690
Query: 311 NALICVYGKHGDVK----VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
L+ H +V+ VA +LF +IE NI ++ + YA D +E+ +
Sbjct: 1691 GTLLGACRTHHEVELGRVVADHLF-KIESDNIGNYVVMSNLYAADARWDGVMEIRRLMRT 1749
Query: 367 LDGGSMERPNVISWSAV 383
+ +++P SW V
Sbjct: 1750 RE---LKKPAGCSWIEV 1763
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/608 (31%), Positives = 311/608 (51%), Gaps = 76/608 (12%)
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
D ++++ WN+ LR ++ AL LY +M G + FTFP ++C S
Sbjct: 15 LDLQNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSC---ASLSL 71
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+ G +H HV++ G + + LI MY K ++ + K+FD+ N+ S N+
Sbjct: 72 PLA-GSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDE----NHHSRNLA-- 124
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
V + +L++ ++ R + + LF MRK G+ V
Sbjct: 125 ---------------------------VCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSV 157
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
A + ++ VCA G +H ++ +G GD+ V
Sbjct: 158 NAVTMLGLIPVCAGPIHLGFGTSLHACSVR----------------FGLDGDLSVG---- 197
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
N L+T Y G D A ++F DG M +I+W+A+I +A N
Sbjct: 198 -----------NCLLTMYVRCGSVDFARKLF------DG--MPEKGLITWNAMISGYAQN 238
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
G LDL+RKM+ +V + VT+ G+LS CA A GRE+ + N ++
Sbjct: 239 GLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLK 298
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
N L+NMY +CG L + +F+ + +K++I+W ++I+GYGM+G GE A+ F+EMI +
Sbjct: 299 NALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDEL 358
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
PDG AFV+VLSACSHAGL +G F M R++ ++P EHY+C+VDLLGRAG L+EA
Sbjct: 359 PDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARK 418
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
++ +M +EP+ VWG LL +C++H+N ++AE ++ G Y+LLSNI++ +G
Sbjct: 419 LIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGN 478
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
E +VR+ + + LKK G S++E + +IH+F +G+ + + +L+ L ++
Sbjct: 479 MEGILRVRVMMRERKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKR 538
Query: 691 KGCVPDND 698
+G DND
Sbjct: 539 RGGSNDND 546
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 221/502 (44%), Gaps = 83/502 (16%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
Q+H +I TG F+ ++S+Y + + AR VF+ ++ ++ +N+++
Sbjct: 77 QLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDEN-HHSRNLAVCYNALIAGYS 135
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
N + +A+ L+ +MRK GV + T +I C + FG +H ++ G
Sbjct: 136 LNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVC----AGPIHLGFGTSLHACSVRFGLD 191
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
G++ + N L+ MY + G + + KLFD + K I+WN M SG+A N L+L+++M
Sbjct: 192 GDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKM 251
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E G+ P+ VT +LSS CA L A
Sbjct: 252 EFTGIVPDPVTLVGVLSS-----------------------------------CAHLGAH 276
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
G+ + + GF F+KNALI +Y + G++ A+ +F + EKN++SW A+I Y
Sbjct: 277 AAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGY 336
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
G + AV++F ++ D E P+ ++ +V+ A + G E+ L F M+
Sbjct: 337 GMHGQGELAVQLFDEMISSD----ELPDGAAFVSVLSACSHAGLTEKGLYYFTAME---- 388
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH- 467
L G E + VV ++ + G LEE
Sbjct: 389 ---------------RDYGLQPGPEHYSCVV---------------DLLGRAGRLEEARK 418
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC-SHA 526
L+ + D W +++ ++ E A FE++IE F+P + + +LS S A
Sbjct: 419 LIGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIE--FEPTNIGYYVLLSNIFSEA 476
Query: 527 GLVNEGRRIFDMM-VREFRIEP 547
G + R+ MM R+ + EP
Sbjct: 477 GNMEGILRVRVMMRERKLKKEP 498
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
++V ++ ++G + FL ++++YAR G L AR +F+ + + + W +I+
Sbjct: 280 REVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGM---TEKNVISWTAIIAGY 336
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG-SFRFRFSFGQIVHNHVLQMG 166
+G E A++L+ +M L DG F V+ AC G + + + F + ++ LQ G
Sbjct: 337 GMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPG 396
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELF 225
+ + V +L+G + G++ ++ KL + V+ + W + ++ + + A F
Sbjct: 397 PE-HYSCVVDLLG---RAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELAELAF 452
Query: 226 KRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
+++ +E EP + + LLS+ + G +E + + MMR+R ++
Sbjct: 453 EKV-IE-FEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLK 495
>gi|242069679|ref|XP_002450116.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
gi|241935959|gb|EES09104.1| hypothetical protein SORBIDRAFT_05g000785 [Sorghum bicolor]
Length = 597
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 184/601 (30%), Positives = 309/601 (51%), Gaps = 80/601 (13%)
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
+R S+GL+ + L+ + + L TFP I++ + + G +H L
Sbjct: 50 IRALSSSGLHLHVLRFHSHLPNPSHL----TFPFAIKSASRLPD---PLTAGAQLHARSL 102
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
++ N H++ L+ +YA+ G++ D+ K FD++R
Sbjct: 103 KLPSHSNPHVLTSLLNLYARCGRLHDAQKAFDEMRQP----------------------- 139
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
P+ V+WT+L++++ GR E + + G+ + VL+ CA
Sbjct: 140 -----------PSTVSWTALITAYMDAGRGLEAIGVARSAFASGVRPDSFTAVRVLTACA 188
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
+A G+ + K G VFV A + +Y K G++ A+ +F +++ K
Sbjct: 189 RVADLVTGEEVWTAAEKEGIAGNVFVATAAVDLYVKCGEMDKARGVFDKMKNK------- 241
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+V++W A++G +ASNG EAL+LF M
Sbjct: 242 --------------------------------DVVAWGAMVGGYASNGHPREALELFFAM 269
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
Q+ + + T++G LS C AL++GR + G + + N ++ L++MY KCG
Sbjct: 270 QVEGMRPDCYTVAGALSACTRLGALDLGRRVVGMLQWDEVLGNPVLGTALIDMYAKCGST 329
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
E +VF+++ +D+I WN+MI G GM G + A A +M ++G + F+ +L +C
Sbjct: 330 GEAWMVFQKMRNRDIIVWNAMILGLGMTGHEKIAFALVGQMKKSGMTLNDNTFIGLLCSC 389
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
+H GLV +GRR F M + + I P++EHY MVDLL RAGLLQEA ++++MPME NA V
Sbjct: 390 THTGLVKDGRRYFRNMTQLYHIRPRIEHYGIMVDLLSRAGLLQEAHQLIQDMPMEANAVV 449
Query: 584 WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKT 643
WG LL C++H+N D+AE + Q+ L +G+Y++LSNIY+ SGRWEDAAK+R+ K
Sbjct: 450 WGALLGGCKIHRNADLAEHVLKQLIQLEPWNSGNYVVLSNIYSNSGRWEDAAKLRLEMKA 509
Query: 644 KGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWE 703
KG++KV SW+E+ K+H F G+ + L+EL ++M+ G P ++++++
Sbjct: 510 KGVEKVPASSWVELDGKVHEFHVGDKSHPLSDQIYAKLDELGMEMKAMGYKPSTEVVMFD 569
Query: 704 M 704
+
Sbjct: 570 I 570
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/487 (21%), Positives = 197/487 (40%), Gaps = 93/487 (19%)
Query: 3 HSLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANAS 62
H L H +PS+ + PF+I + + L D + Q+H + + ++++
Sbjct: 61 HVLRFHSHLPNPSHLTFPFAIKSASR-LPD----------PLTAGAQLHARSLKLPSHSN 109
Query: 63 AFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVK 122
+ +L++YAR GRL DA+ F+ S++ W +++ + G A+ +
Sbjct: 110 PHVLTSLLNLYARCGRLHDAQKAFDE--MRQPPSTVSWTALITAYMDAGRGLEAIGVARS 167
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
GV D FT V+ AC + G+ V + G GNV + + +Y
Sbjct: 168 AFASGVRPDSFTAVRVLTACARVADL----VTGEEVWTAAEKEGIAGNVFVATAAVDLYV 223
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K G+M + +FDK++ K+ ++W M G+A N ALELF M++EG+ P+ T
Sbjct: 224 KCGEMDKARGVFDKMKNKDVVAWGAMVGGYASNGHPREALELFFAMQVEGMRPDCYT--- 280
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
+A LS C L A +G+ + G +
Sbjct: 281 --------------------------------VAGALSACTRLGALDLGRRVVGMLQWDE 308
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
+ ALI +Y K G A +F ++ ++I+ WNA+I G
Sbjct: 309 VLGNPVLGTALIDMYAKCGSTGEAWMVFQKMRNRDIIVWNAMILGLGMTG---------- 358
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
EK+ AFA L +M+ + + N T GLL C
Sbjct: 359 -HEKI------------------AFA----------LVGQMKKSGMTLNDNTFIGLLCSC 389
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLL-NMYMKCGCLEEGHLVFEQIE-KKDLIT 480
+ + GR ++ ++ + + G++ ++ + G L+E H + + + + + +
Sbjct: 390 THTGLVKDGRRYFRNMTQLYHIRPRIEHYGIMVDLLSRAGLLQEAHQLIQDMPMEANAVV 449
Query: 481 WNSMISG 487
W +++ G
Sbjct: 450 WGALLGG 456
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 183/572 (31%), Positives = 307/572 (53%), Gaps = 50/572 (8%)
Query: 135 FPLVIRACKFMGSFRFR-FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
+ +I AC R R G+ VH H F V I N L+ MYAK G + D+ L
Sbjct: 90 YSTLIAAC-----VRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQML 144
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FD++ ++ SWN M G+A + A +LF M NF +W + +S + +
Sbjct: 145 FDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRD---NF-SWNAAISGYVTHNQP 200
Query: 254 EETMDLFDMMRKRGIEVGAE-AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
E ++LF +M++ + ++ L+ A + +GK IHG++I+
Sbjct: 201 REALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIR------------ 248
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
+E+ +V W+AL+ Y + G DEA +F Q++ D
Sbjct: 249 ------------------TELNLDEVV-WSALLDLYGKCGSLDEARGIFDQMKDRD---- 285
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
V+SW+ +I +GR EE LFR + + V N T +G+L+ CA+ AA ++G+
Sbjct: 286 ----VVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGK 341
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
E+HG+++ + + L++MY KCG VF ++ + DL++W S+I GY NG
Sbjct: 342 EVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNG 401
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
+ AL FE ++++G KPD V +V VLSAC+HAGLV++G F + + + +HY
Sbjct: 402 QPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHY 461
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
AC++DLL R+G +EA +I+ NMP++P+ ++W +LL CR+H N ++A+ A ++ +
Sbjct: 462 ACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEP 521
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
E +Y+ L+NIYA +G W + A VR G+ K G+SWIE+KR++H+F G++
Sbjct: 522 ENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVFLVGDTSHP 581
Query: 673 DLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
++ E L EL+ +++ +G VPD + +L ++
Sbjct: 582 KTSDIHEFLGELSKKIKEEGYVPDTNFVLHDV 613
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 176/338 (52%), Gaps = 14/338 (4%)
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
R++E ++L R A + +++ C A +G+ +H F VF+ N
Sbjct: 70 RVKEAVELLHRTDHRP---SARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISN 126
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
L+ +Y K G + AQ LF E+ +++ SWN +I YA+ G ++A ++F ++ + D
Sbjct: 127 RLLDMYAKCGSLVDAQMLFDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDN-- 184
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQL-AKVVANSVTISGLLSVCAESAALNI 430
SW+A I + ++ + EAL+LFR MQ + +N T+S L+ A L +
Sbjct: 185 ------FSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRL 238
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
G+EIHG+++R +N + +V + LL++Y KCG L+E +F+Q++ +D+++W +MI
Sbjct: 239 GKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFE 298
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
+G E F +++++G +P+ F VL+AC+ + G+ + M+ +P
Sbjct: 299 DGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHA-GYDPGSF 357
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ +V + + G + A + M +P+ W +L+
Sbjct: 358 AISALVHMYSKCGNTRVARRVFNEM-HQPDLVSWTSLI 394
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 158/337 (46%), Gaps = 17/337 (5%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K++H LI T N + + +L +Y + G L +AR +F+ + W +++
Sbjct: 240 KEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMK---DRDVVSWTTMIHRC 296
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+G E L+ + + GV + +TF V+ AC + G+ VH +++ G+
Sbjct: 297 FEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHL----GKEVHGYMMHAGY 352
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
++ L+ MY+K G + ++F+++ + +SW + G+A N D AL F+
Sbjct: 353 DPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEALHFFEL 412
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGIEVGAEAIAVVLSVCADLA 286
+ G +P+ VT+ +LS+ G +++ ++ F ++ K G+ A+ A V+ + LA
Sbjct: 413 LLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDL---LA 469
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ---NLFSEIEEKNIVSWNA 343
K + + F+ +L+ HG++++A+ EIE +N ++
Sbjct: 470 RSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYEIEPENPATYIT 529
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
L YA AGL E V ++ + G +++P SW
Sbjct: 530 LANIYANAGLWSEVANVRKDMDNM--GIVKKPGK-SW 563
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 200/687 (29%), Positives = 340/687 (49%), Gaps = 92/687 (13%)
Query: 22 SIITYNNSLLDCFD-HLLQQCKTIHQ-LKQVHNQLIVTGANASAFLAARVLSIYARFGRL 79
++IT+ N L D L++ K IH +++ + L V F+ +++ Y + G L
Sbjct: 9 NVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDV-------FVNTALVNTYTKCGSL 61
Query: 80 FDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVI 139
DAR VF+ P C+S WNS++ + A ++ +M+ G D TF ++
Sbjct: 62 TDARKVFDGMP--CRSVGT-WNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSIL 118
Query: 140 RACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV 199
AC + + G+ V + + F+ ++ + LI MYA+ ++ ++F +++
Sbjct: 119 DACVNPENLQH----GKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQ 174
Query: 200 KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDL 259
KN I+W+ + + FA + C AL F+ M+ EG+ PN VT+ SLL+ LEE
Sbjct: 175 KNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEEL--- 231
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
IH + + G +D + NAL+ VYG+
Sbjct: 232 --------------------------------SRIHLLITEHGLDDTTTMSNALVNVYGR 259
Query: 320 --HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
G++ VA+ + E++E+ I +
Sbjct: 260 CETGELDVAEVILQEMDEQQITA------------------------------------- 282
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
W+ +I + +GR EAL+ ++++QL + + VT +L+ C S +L G+ IH +
Sbjct: 283 --WNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSN 340
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
V ++ +++V+N L NMY KCG +E +F+ + + ++WN M+ Y +G E
Sbjct: 341 AVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEV 400
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
L +M + G K +G+ FV+VLS+CSHAGL+ EG + F + + IE + EHY C+VD
Sbjct: 401 LKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVD 460
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
LLGRAG LQEA + MP EP W +LL +CR+HK+ D + A ++ L + +
Sbjct: 461 LLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSA 520
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
++LSNIY+ G W++AAK+R + ++ +KKV G S I+VK K+H F ++ +
Sbjct: 521 SVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEI 580
Query: 678 CEVLEELALQMENKGCVPDNDIILWEM 704
+ +EEL M G VPD ++L ++
Sbjct: 581 YDKVEELCFAMREAGYVPDTKMVLHDV 607
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 2/188 (1%)
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
M L V AN +T +L+ + AL G+ IH V + ++ V L+N Y KCG
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
L + VF+ + + + TWNSMIS Y ++ A F+ M G + D V F+++L A
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 523 CSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAY 582
C + + G+ + + + E E + ++ + R + A+ + M + N
Sbjct: 121 CVNPENLQHGKHVRE-SISETSFELDLFVGTALITMYARCRSPENAAQVFGRMK-QKNLI 178
Query: 583 VWGTLLNS 590
W ++ +
Sbjct: 179 TWSAIITA 186
>gi|212723118|ref|NP_001131685.1| hypothetical protein [Zea mays]
gi|194692242|gb|ACF80205.1| unknown [Zea mays]
gi|414879040|tpg|DAA56171.1| TPA: hypothetical protein ZEAMMB73_730680 [Zea mays]
Length = 590
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 194/635 (30%), Positives = 310/635 (48%), Gaps = 90/635 (14%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAAR---VLSIYARFGRLFDARNVFETAPFDCK 94
L+ C++ Q H L+ +G A++ L +L++ + A VF P
Sbjct: 17 LRACRSASHALQCHALLLTSGHLAASPLRLSNHLLLALASVPSAAALADVVFARLPLPAA 76
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
WN+ +R++ + AL + +MR+ GV D +TFP V++AC R
Sbjct: 77 RDPFAWNTAIRLH-APARPRAALLYFARMRRCGVRPDAYTFPAVLKACGCAPGCRA---- 131
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G +VH ++ G ++ VN LI Y ++ + K+FD
Sbjct: 132 GLLVHAEAVRRGLAADLFTVNALISFYCRILDIRSGRKVFD------------------- 172
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
E G+ + V+W S+++ + CG + ++FD M ++
Sbjct: 173 --------------EAGGVSRDLVSWNSMVAGYVGCGEMGLAQEMFDEMPQKD------- 211
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV--AQNLFSE 332
F LI YGK G V A+ LF +
Sbjct: 212 --------------------------------TFSWATLIDGYGKQGGAGVDRARELFDQ 239
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ E+++V WN++I YA G DEA +F + M NVISWS VI S G
Sbjct: 240 MPERDLVCWNSMIDGYARHGRMDEARSLFEE--------MPERNVISWSIVIDGHVSCGE 291
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
+EAL+ F+ M + + + G +S CA+ AL GR +H ++ + + +++VQ
Sbjct: 292 AKEALEYFQSMLRCGLRPDRIAAVGAVSACAQLGALEQGRWLHSYLEKKKLLSDVVVQTA 351
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++MY+KCGCL+ L+FE + ++ ++TWN MI G G +G G +A+ F M D
Sbjct: 352 LIDMYVKCGCLDLAMLIFESMAERSVVTWNVMIVGLGTHGFGLDAVTLFHRMEAESVAVD 411
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
++ + +L+AC+HAGLV+EG IF M ++F I+P++EHY +VDLLGRAG L +A +
Sbjct: 412 DLSVLGMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAI 471
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
+ MPMEP +WG+LL +CR H ++AE ++ L + +G Y+LLSNIYA G W
Sbjct: 472 ETMPMEPTPELWGSLLAACRSHSCVELAELSVERLADLGADDSGVYVLLSNIYADEGMWG 531
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG 667
D ++R +G++K G+S IEV +IH F +G
Sbjct: 532 DVLRIRKLMSDEGMRKDIGRSVIEVDGEIHEFVNG 566
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 114/542 (21%), Positives = 210/542 (38%), Gaps = 105/542 (19%)
Query: 17 PSRPFSIITYNNSLLDC--------FDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFL 65
P+RP + + Y + C F +L+ C + VH + + G A F
Sbjct: 91 PARPRAALLYFARMRRCGVRPDAYTFPAVLKACGCAPGCRAGLLVHAEAVRRGLAADLFT 150
Query: 66 AARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
++S Y R + R VF+ A + WNS++ V G A +++ +M +
Sbjct: 151 VNALISFYCRILDIRSGRKVFDEAG-GVSRDLVSWNSMVAGYVGCGEMGLAQEMFDEMPQ 209
Query: 126 LGVLGDGFTFPLVIRACKFMGSF---RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
D F++ +I G R R F Q+ ++ N +I YA
Sbjct: 210 ----KDTFSWATLIDGYGKQGGAGVDRARELFDQMPERDLV---------CWNSMIDGYA 256
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
+ G+M ++ LF+++ +N ISW+++ G + ALE F+ M GL P+ +
Sbjct: 257 RHGRMDEARSLFEEMPERNVISWSIVIDGHVSCGEAKEALEYFQSMLRCGLRPDRIA--- 313
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
VGA +S CA L A G+ +H ++ K
Sbjct: 314 --------------------------AVGA------VSACAQLGALEQGRWLHSYLEKKK 341
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
V V+ ALI +Y K G + +A +F + E+++V+WN +I G +AV
Sbjct: 342 LLSDVVVQTALIDMYVKCGCLDLAMLIFESMAERSVVTWNVMIVGLGTHGFGLDAVT--- 398
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
LF +M+ V + +++ G+L+ C
Sbjct: 399 ------------------------------------LFHRMEAESVAVDDLSVLGMLTAC 422
Query: 423 AESAALNIGREI-HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT- 480
+ ++ G EI H ++ + L+++ + G L++ E + +
Sbjct: 423 THAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTPEL 482
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
W S+++ + E A + E + + G GV +V + + + G+ + RI +M
Sbjct: 483 WGSLLAACRSHSCVELAELSVERLADLGADDSGV-YVLLSNIYADEGMWGDVLRIRKLMS 541
Query: 541 RE 542
E
Sbjct: 542 DE 543
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 325 bits (834), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 193/628 (30%), Positives = 332/628 (52%), Gaps = 87/628 (13%)
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
A VF+ P + + + W ++ G +A+ L++ M G + D FT+ V+ A
Sbjct: 4 AYKVFDKMP---ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 60
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM---GQMSDSFKLFDKVR 198
C +G + G+ +H+ V+++G +V + L+ MYAK G + DS K+F+++
Sbjct: 61 CTELG----LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 116
Query: 199 VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE-ETM 257
E N ++WT++++++A+ G + E +
Sbjct: 117 -----------------------------------EHNVMSWTAIITAYAQSGECDKEAI 141
Query: 258 DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
+LF M I + + VL C +L+ + G+ ++ + +K G
Sbjct: 142 ELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG--------------- 186
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL-EKLDGGSMERPN 376
I N V N+LI+ YA +G ++A + F L EK N
Sbjct: 187 ---------------IASVNCVG-NSLISMYARSGRMEDARKAFDILFEK---------N 221
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
++S++A++ +A N + EEA LF ++ + ++ T + LLS A A+ G +IHG
Sbjct: 222 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 281
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
+++ N + N L++MY +CG +E VF ++E +++I+W SMI+G+ +G
Sbjct: 282 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 341
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
AL F +M+E G KP+ + +VAVLSACSH G+++EG++ F+ M +E I P+MEHYACMV
Sbjct: 342 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 401
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
DLLGR+GLL EA + + +MP+ +A VW TLL +CR+H NT++ A I +
Sbjct: 402 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPA 461
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKN 676
+Y+LLSN++A++G+W+D K+R S K + L K AG SWIEV+ ++H F G +
Sbjct: 462 AYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQ 521
Query: 677 VCEVLEELALQMENKGCVPDNDIILWEM 704
+ + L++LA +++ G +PD D +L ++
Sbjct: 522 IYQELDQLASKIKEMGYIPDTDFVLHDI 549
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 190/377 (50%), Gaps = 53/377 (14%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARF---GRLFDARNVFE 87
+ +L C + L KQ+H+++I G + ++ +YA+ G + D+R VFE
Sbjct: 54 YSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFE 113
Query: 88 TAPFDCKSSSLLWNSILRVNVSNG-LYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
P + + + W +I+ +G + A++L+ KM + + F+F V++AC G
Sbjct: 114 QMP---EHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC---G 167
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
+ ++ G+ V+++ +++G + N LI MYA+ G+M D+ K FD + KN +S+N
Sbjct: 168 NLSDPYT-GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYN 226
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
+ G+A N + A LF + G+ + T+ SLLS A G + +
Sbjct: 227 AIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGK----------- 275
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
G+ IHG ++KGG++ + NALI +Y + G+++ A
Sbjct: 276 ------------------------GEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAA 311
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+F+E+E++N++SW ++IT +A+ G A+E+F ++ L+ G+ +PN I++ AV+ A
Sbjct: 312 FQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKM--LETGT--KPNEITYVAVLSA 367
Query: 387 FASNGRGEEALDLFRKM 403
+ G E F M
Sbjct: 368 CSHVGMISEGQKHFNSM 384
Score = 101 bits (252), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 123/236 (52%), Gaps = 10/236 (4%)
Query: 34 FDHLLQQCKTI---HQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + + +QV++ + G + + ++S+YAR GR+ DAR F+
Sbjct: 159 FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL- 217
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + +N+I+ N E A L+ ++ G+ FTF ++ +G+
Sbjct: 218 --FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM-- 273
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H +L+ G++ N I N LI MY++ G + +F++F+++ +N ISW M +
Sbjct: 274 --GKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 331
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
GFA + ALE+F +M G +PN +T+ ++LS+ + G + E F+ M K
Sbjct: 332 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKE 387
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 325 bits (834), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 183/591 (30%), Positives = 301/591 (50%), Gaps = 80/591 (13%)
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+S WN LR L+ ++ LY M + G D F+FP ++++C S S G
Sbjct: 17 ASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSC---ASLSLPVS-G 72
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS--WNMMFSGFA 213
Q +H HV + G + ++ LI MY K G ++D+ K+F++ + +S +N + SG+
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYT 132
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
N A +F+R M++ G+ V +
Sbjct: 133 ANSKVTDAAYMFRR-----------------------------------MKETGVSVDSV 157
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ ++ +C +G+ +HG +KGG + V V N+ I +Y K G V+ + LF E+
Sbjct: 158 TMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEM 217
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
K + I+W+AVI ++ NG
Sbjct: 218 PVKGL---------------------------------------ITWNAVISGYSQNGLA 238
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
+ L+L+ +M+ + V + T+ +LS CA A IG E+ V N+ V N
Sbjct: 239 YDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNAS 298
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY +CG L + VF+ + K L++W +MI YGM+G+GE L F++MI+ G +PDG
Sbjct: 299 ISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDG 358
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
FV VLSACSH+GL ++G +F M RE+++EP EHY+C+VDLLGRAG L EA + ++
Sbjct: 359 AVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIE 418
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
+MP+EP+ VWG LL +C++HKN D+AE +++ G Y+L+SNIY+ S E
Sbjct: 419 SMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEG 478
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
++R+ + + +K G S++E K ++H+F +G+ + V +L+EL
Sbjct: 479 IWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 122/520 (23%), Positives = 223/520 (42%), Gaps = 86/520 (16%)
Query: 34 FDHLLQQCKTIH---QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C ++ +Q+H + G F+ ++S+Y + G + DAR VFE P
Sbjct: 56 FPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENP 115
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
S+ +N+++ +N +A ++ +M++ GV D T ++ C +
Sbjct: 116 -QSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLC----TVPE 170
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H ++ G V ++N I MY K G + +LFD++ VK I+WN + S
Sbjct: 171 YLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVIS 230
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
G++ N LEL+++M+ G+ P+ T S+LSS
Sbjct: 231 GYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSS------------------------ 266
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
CA L A +G + V GF VFV NA I +Y + G++ A+ +F
Sbjct: 267 -----------CAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+ K++VSW A+I Y G+ + + +F + K RP+ + V+ A + +
Sbjct: 316 DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG----IRPDGAVFVMVLSACSHS 371
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
G ++ L+LFR M+ L G E +
Sbjct: 372 GLTDKGLELFRAMK-------------------REYKLEPGPEHY--------------- 397
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIE-KKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
+ L+++ + G L+E E + + D W +++ ++ + A F ++IE F
Sbjct: 398 SCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--F 455
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE--FRIEP 547
+P+ + + ++S EG +M+RE FR +P
Sbjct: 456 EPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 495
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 208/716 (29%), Positives = 352/716 (49%), Gaps = 97/716 (13%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
L+ T + LKQVH LI + FL +L F + + +F F +
Sbjct: 19 LISVASTFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQF---PN 75
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
L+N+++ V+N L+ L L++ +RK G+ GFTFPLV++AC + + G
Sbjct: 76 IFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKL----GI 131
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
+H+ V++ GF +V + L+ +Y+ G+++D+ K+F+++
Sbjct: 132 DLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIP------------------ 173
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
E + VTWT+L S + G+ E +DLF M + G+ + I
Sbjct: 174 -----------------ERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIV 216
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK 336
VLS C H+G + G I E+ KN+ +
Sbjct: 217 QVLSACV-----HVGDLDSGEWIVKHMEEMEMQKNSFV---------------------- 249
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
L+ YA+ G ++A VF SM ++++WS +I +ASN +E
Sbjct: 250 ----RTTLVNLYAKCGKMEKARSVFD--------SMGEKDIVTWSTMIQGYASNSFPKEG 297
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
++ F +M + + +I G LS CA AL++G + R N+ + N L++M
Sbjct: 298 IEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDM 357
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCG + G VF+++++KD++ N+ ISG NG + + A F + + G PDG F
Sbjct: 358 YAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTF 417
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
+ +L C HAGL+ +G R F+ + + ++ +EHY CMVDL GRAG+L +A ++ +MP
Sbjct: 418 LGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMP 477
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAK 636
M PNA VWG LL+ CR+ K+T +AE + ++ L G+Y+ LSNIY+ SGRW++AA+
Sbjct: 478 MRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAE 537
Query: 637 VRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
VR KG+KK+ G SWIE++ +H F + + + LE+L +M G VP
Sbjct: 538 VRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPT 597
Query: 697 NDIILWEMMGKKNVKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRSTNGQLMK 752
+ + +++ ++ K R++G + KL + L + + +GQ+++
Sbjct: 598 TEFVFFDVEDEE---------------KERVLGHHSEKLAVAFGL-ISTDHGQVIR 637
Score = 43.5 bits (101), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 51/283 (18%), Positives = 111/283 (39%), Gaps = 44/283 (15%)
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
M + V +++ + + ++ + ++ N +++H ++ ++ + + N LL +
Sbjct: 1 MSIVTVPSSTSKVQQIKTLISVASTFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQ 60
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
L+F + ++ +N++I+G+ N L L F + + G G F VL A
Sbjct: 61 THYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKA 120
Query: 523 CSHA-----------------------------------GLVNEGRRIFDMMVREFRIEP 547
C+ A G +N+ ++F+ + E
Sbjct: 121 CTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIP-----ER 175
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKN---MPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
+ + + AG +EA D+ K M + P++Y +L++C + D E +
Sbjct: 176 SVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIV 235
Query: 605 SQIFGL-ITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
+ + + + + L N+YA G+ E A V S K +
Sbjct: 236 KHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDI 278
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 202/638 (31%), Positives = 336/638 (52%), Gaps = 88/638 (13%)
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDC--KSSSLLWNSILRVNVSNGLYENALKLYV 121
F+ + + +YA G + AR +F DC + ++ +WN+++ V N A+ L+V
Sbjct: 256 FVVSSAIFMYAELGCVDFAREIF-----DCCLERNTEVWNTMIGGYVQNNCPIEAIDLFV 310
Query: 122 K-MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
+ M + D TF + A + ++ G+ +H ++L+ V I+N +I M
Sbjct: 311 QVMESEQFVLDDVTF---LSALTAISQLQW-LELGRQLHAYILKSSTILQVVILNAIIVM 366
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
Y++ G + SFK+F + LE + VTW
Sbjct: 367 YSRCGSIGTSFKVFSNM-----------------------------------LERDVVTW 391
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
+++S+ + G +E + L M+K+G V + + +LS+ ++L + +GK H ++I+
Sbjct: 392 NTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIR 451
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G + + + + LI +Y K G + AQ LF EKN + Y DEA
Sbjct: 452 HGIQ-FEGMDSYLIDMYAKSGLITTAQQLF----EKN--------SDYDR----DEA--- 491
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
+W+A+I + NG EE +FRKM V N+VT++ +L
Sbjct: 492 ------------------TWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILP 533
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
C + +G++IHG +R +N+N+ V LL+MY K G + VF + +K+ +T
Sbjct: 534 ACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVT 593
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
+ +MIS YG +G+GE AL+ F M+ +G KPD V FVA+LSACS+AGLV+EG RIF M
Sbjct: 594 YTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSME 653
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAY-VWGTLLNSCRMHKNTDV 599
RE++I+P EHY C+ D+LGR G + EA + VK + E N + +WG+LL +CR+H ++
Sbjct: 654 REYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFEL 713
Query: 600 AEAMASQIFGLI--TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
+ +A+++ + + TG ++LLSNIYAA G W++ +VR + KGL K AG SW+EV
Sbjct: 714 GKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEV 773
Query: 658 KRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
++ F S + + ++LE+LA++M++ G P
Sbjct: 774 AGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKP 811
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 142/606 (23%), Positives = 257/606 (42%), Gaps = 126/606 (20%)
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR-KLGV 128
LS R G A ++F++ P + +++LWN+I+ + N + +AL Y +MR
Sbjct: 44 LSHLCRQGHPHQALHLFDSIP---RPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSP 100
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK----- 183
D +TF ++AC S + G+ +H HVL+ F + + N L+ MY+
Sbjct: 101 KFDSYTFSSTLKACAQARSLKL----GKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEV 156
Query: 184 --MGQMSD------SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
+G D ++FD +R +N ++WN M S + A ++F+ M G+ P
Sbjct: 157 PYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRP 216
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
V++ ++ + R M +D V++
Sbjct: 217 TPVSFVNVFPAVWR-------MSDYD----------------------------NANVLY 241
Query: 296 GFVIKGG--FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
G V+K G F D FV ++ I +Y + G V A+ +F E+N WN +I Y +
Sbjct: 242 GLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNC 301
Query: 354 CDEAVEVF-----------------------SQLEKLDGG---------SMERPNVISWS 381
EA+++F SQL+ L+ G S V+ +
Sbjct: 302 PIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILN 361
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVA------------------------------- 410
A+I ++ G + +F M VV
Sbjct: 362 AIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMV 421
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
+SVT++ LLS+ + + IG++ H +++R + + + L++MY K G + +F
Sbjct: 422 DSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGM-DSYLIDMYAKSGLITTAQQLF 480
Query: 471 EQIE--KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
E+ +D TWN+MI+GY NGL E A F +MIE +P+ V ++L AC+ G
Sbjct: 481 EKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGT 540
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ G++I +R F + + ++D+ ++G + A ++ +E N+ + T++
Sbjct: 541 IGLGKQIHGFAIRCF-LNRNVFVGTALLDMYSKSGAITYAENVFAE-TLEKNSVTYTTMI 598
Query: 589 NSCRMH 594
+S H
Sbjct: 599 SSYGQH 604
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 37/268 (13%)
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA-NSVTISGLLSVCAESAALN 429
S+ RP + W+ +I F N +AL + +M+ + +S T S L CA++ +L
Sbjct: 62 SIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQARSLK 121
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL--------------VFEQIEK 475
+G+ +H HV+R + +V N LLNMY C E +L VF+ + K
Sbjct: 122 LGKALHCHVLRSHFGSSRIVYNSLLNMYSTC-LTEVPYLGTAYDFNNCDLVRRVFDTMRK 180
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
++++ WN+MIS Y A F M+ G +P V+FV V A + +
Sbjct: 181 RNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNANVL 240
Query: 536 FDMMVRE--------FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
+ ++V+ F + + YA LG +E D +E N VW T+
Sbjct: 241 YGLVVKLGSDFVDDFFVVSSAIFMYA----ELGCVDFAREIFDCC----LERNTEVWNTM 292
Query: 588 L-----NSCRMHKNTDVAEAMASQIFGL 610
+ N+C + + M S+ F L
Sbjct: 293 IGGYVQNNCPIEAIDLFVQVMESEQFVL 320
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
TI KQ+H I N + F+ +L +Y++ G + A NVF + +S+ + +
Sbjct: 540 TIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAET---LEKNSVTYTT 596
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
++ +G+ E AL L+ M G+ D TF ++ AC + G
Sbjct: 597 MISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAG 640
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 200/648 (30%), Positives = 340/648 (52%), Gaps = 52/648 (8%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYA--RFGRLFDARNVFETAPFDCKSSSLLWNSIL 104
LK +H Q+I+ G +++S A G L A+ +F+ P + + ++NS++
Sbjct: 4 LKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIP---QPNKFMYNSLI 60
Query: 105 RVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
R ++ +A+ L+ +M G+ + FT P V++AC + + +VH ++
Sbjct: 61 RGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKAC----GCKSAYWEAVLVHGLAIK 116
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
+G V + N LI +Y G + + KLFD + K +SWN
Sbjct: 117 LGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSWN------------------ 158
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
S++ +A G +E LF MR+ G+E +LSVC+
Sbjct: 159 -----------------SMIGGYAHMGNWKEAFLLFRKMREWGMEPDGFTFVNLLSVCSQ 201
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
+G+ +H + G + + V+NAL+ +Y K G++ AQ +F +EKN+VSW ++
Sbjct: 202 SRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSM 261
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
I++YA+ G + A ++F Q M NV+SW+++I + G+ EALDLF KM+
Sbjct: 262 ISAYAQHGSIEVARQIFDQ--------MPGKNVVSWNSMISCYLREGQYREALDLFNKMR 313
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
++VV + T+ +L+ C++ L +G++IH +++ + + N L++MY KCG +
Sbjct: 314 NSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVV 373
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
+F ++ K+L++WN +I ++G G A+ FEEM G PD + +LSACS
Sbjct: 374 TALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACS 433
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
H+GLV+ G FD M +R+ ++EHYACMVDLLGR GLL EA +++ MPM+P+ VW
Sbjct: 434 HSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVW 493
Query: 585 GTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTK 644
G LL +CR+H N ++ + + Q+ L + G Y+L+SNIY + RWED K+R +
Sbjct: 494 GALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDR 553
Query: 645 GLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
G+KK S IE+ I+ F + ++ +L++L + + G
Sbjct: 554 GIKKGRAISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRSAG 601
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 325 bits (833), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 200/607 (32%), Positives = 303/607 (49%), Gaps = 86/607 (14%)
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
S WN+ LR + AL LY +M + G + FTFP +++C + S G
Sbjct: 5 STPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAAL-SLPI---LGS 60
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK--VRVKNYISWNMMFSGFAL 214
H + ++G + LI MY K + ++ K+F++ K + +N + SG+
Sbjct: 61 QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVS 120
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
N C A+ L F M + G+ V +
Sbjct: 121 NSKCSDAVLL-----------------------------------FRQMNEEGVPVNSVT 145
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ ++ C +G +H +K GF+ V V N I +Y K G V AQ LF E
Sbjct: 146 LLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDE-- 203
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
M +ISW+A++ +A NG
Sbjct: 204 -------------------------------------MPVKGLISWNAMVSGYAQNGLAT 226
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
L+L+R M + V + VT+ G+LS CA A ++G E+ + N + N L+
Sbjct: 227 NVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALI 286
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
NMY +CG L + VF+ + ++ L++W ++I GYGM+G GE A+ F+EMI +G +PDG
Sbjct: 287 NMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGT 346
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
AFV VLSACSHAGL ++G F MM R +++EP EHY+CMVDLLGRAG L+EA ++++
Sbjct: 347 AFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIES 406
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MP++P+ VWG LL +C++HKN ++AE ++ L E G Y+LLSNIY+ + +
Sbjct: 407 MPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGV 466
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG--NSLQSDLKNVCEVLEEL-ALQMENK 691
++RI K K LKK G S++E+K ++H F G N LQSD + VLEEL A+ M+
Sbjct: 467 LRIRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSD--EIYRVLEELEAIIMQEF 524
Query: 692 GCVPDND 698
G P+ D
Sbjct: 525 G-KPEKD 530
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 210/474 (44%), Gaps = 81/474 (17%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
Q H Q+ G F+ ++S+Y + + +AR VFE F + ++ +N+++ V
Sbjct: 61 QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEEN-FHSRKLTVCYNALVSGYV 119
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
SN +A+ L+ +M + GV + T +I AC G +H L+ GF
Sbjct: 120 SNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPAC----VSPINLELGSSLHCSTLKYGFD 175
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+V +VN I MY K G ++ + KLFD++ VK ISWN M SG+A N LEL++ M
Sbjct: 176 SDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNM 235
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
++ G+ P+ VT +LSS CA+L A
Sbjct: 236 DMNGVHPDPVTLVGVLSS-----------------------------------CANLGAQ 260
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+G + + GF F+ NALI +Y + G++ AQ +F + E+ +VSW A+I Y
Sbjct: 261 SVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGY 320
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
G + AV++F ++ + S P+ ++ V+ A + G ++ L+ F+ M+
Sbjct: 321 GMHGHGEIAVQLFKEMIR----SGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMK---- 372
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+ L G E + +V ++ + G L+E
Sbjct: 373 ---------------RNYQLEPGPEHYSCMV---------------DLLGRAGRLKEAQT 402
Query: 469 VFEQIE-KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
+ E + K D W +++ ++ E A FE +IE +P+ + + +LS
Sbjct: 403 LIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE--LEPENIGYYVLLS 454
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 171/461 (37%), Positives = 267/461 (57%), Gaps = 23/461 (4%)
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
PN W +++ ++A E + +F M + L C + G+ I
Sbjct: 71 PNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQI 130
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
HG V+K G D +F++N LI +Y G ++ A++L + E+++VSWNAL+++YAE GL
Sbjct: 131 HGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLM 190
Query: 355 DEAVEVFSQLEKLDGGSM---------------------ERP--NVISWSAVIGAFASNG 391
+ A +F ++ + + S E P NV+SW+A+I ++ G
Sbjct: 191 ELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAG 250
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
R E L LF MQ A V ++ T+ +LS CA AL+ G +H ++ + ++ + V
Sbjct: 251 RFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVAT 310
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++MY KCG +E+ VF +KD+ TWNS+ISG +G G++AL F EM+ GFKP
Sbjct: 311 ALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKP 370
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
+ V FV VLSACS AGL++EGR +F++MV I+P +EHY CMVDLLGR GLL+EA ++
Sbjct: 371 NEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEEL 430
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
V+ MP + + VW +LL +CR H N ++AE +A ++ L + + S++ LSN+YA+ GRW
Sbjct: 431 VQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRW 490
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
+D +VR + +G++K G S IEV ++ F +G L S
Sbjct: 491 KDVMEVRQKMRAQGVRKDPGCSMIEVDGTVYEFLAGEGLVS 531
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 229/500 (45%), Gaps = 78/500 (15%)
Query: 39 QQCKTIHQLKQVHNQLIVTGANASAFLAARVL---SIYARFGRLFDARNVFETAPFDCKS 95
+ +I +L Q H ++ +G S F A+R++ S + + A ++F P
Sbjct: 15 EMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIP---NP 71
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+S +WN+I+R ++ E AL ++ +M VL D +TF +++C GSF G
Sbjct: 72 NSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSC---GSFS-GVEEG 127
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA-- 213
+ +H HVL+ G ++ I N LI +YA G + D+ L D++ ++ +SWN + S +A
Sbjct: 128 RQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAER 187
Query: 214 --LNFDCD-----------------------GALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ C G LE +R+ E N V+W ++++ ++
Sbjct: 188 GLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYS 247
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
GR E + LF+ M+ G++ + VLS CA + A G+ +H ++ K G F
Sbjct: 248 HAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGF 307
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V AL+ +Y K G ++ A +F+ K+I +WN++I+ + G A+++FS++
Sbjct: 308 VATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEM---- 363
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
++ F N VT +LS C+ + L
Sbjct: 364 --------------LVEGFKPN---------------------EVTFVCVLSACSRAGLL 388
Query: 429 NIGREIHGHVVRVSMNKNILVQNG-LLNMYMKCGCLEEGHLVFEQIEKKDL-ITWNSMIS 486
+ GRE+ +V V + + G ++++ + G LEE + +++ +K+ + W S++
Sbjct: 389 DEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLG 448
Query: 487 GYGMNGLGENALATFEEMIE 506
+G E A ++++E
Sbjct: 449 ACRNHGNVELAERVAQKLLE 468
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 123/293 (41%), Gaps = 26/293 (8%)
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL---NMYMKCGCLEE 465
+++S +LS + +++ + H H+++ + + + L+ + +
Sbjct: 1 MSSSFPPPPILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPY 60
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
H +F +I + WN++I Y + E AL F +M+ A PD F L +C
Sbjct: 61 AHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGS 120
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
V EGR+I +++ + + ++ L G +++A ++ M +E + W
Sbjct: 121 FSGVEEGRQIHGHVLKT-GLGDDLFIQNTLIHLYASCGCIEDARHLLDRM-LERDVVSWN 178
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITE-TTGSYMLLSNIYAASGRWEDAAKVRISAKTK 644
LL++ + + E +A +F +TE S+ + + Y G E+A
Sbjct: 179 ALLSA---YAERGLME-LACHLFDEMTERNVESWNFMISGYVGVGLLEEA---------- 224
Query: 645 GLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
++V G++ ++ + +G S V + E+ M++ G PDN
Sbjct: 225 --RRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFED----MQHAGVKPDN 271
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 272/467 (58%), Gaps = 13/467 (2%)
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE-AI 275
D D A LF ++ PN + S++ ++ + + ++ + ++ E+
Sbjct: 57 DMDYATRLFNQVS----NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTF 112
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
+ CA L + ++GK +HG + K G +V +NALI +Y K D+ A +F E+ E
Sbjct: 113 PFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYE 172
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
++++SWN+L++ YA G +A +F + LD ++SW+A+I + G E
Sbjct: 173 RDVISWNSLLSGYARLGQMKKAKGLFHLM--LD------KTIVSWTAMISGYTGIGCYVE 224
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
A+D FR+MQLA + + +++ +L CA+ +L +G+ IH + R K V N L+
Sbjct: 225 AMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIE 284
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY KCG + + +F Q+E KD+I+W++MISGY +G A+ TF EM A KP+G+
Sbjct: 285 MYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGIT 344
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
F+ +LSACSH G+ EG R FDMM ++++IEP++EHY C++D+L RAG L+ A +I K M
Sbjct: 345 FLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTM 404
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
PM+P++ +WG+LL+SCR N DVA + L E G+Y+LL+NIYA G+WED +
Sbjct: 405 PMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVS 464
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLE 682
++R + + +KK G S IEV + F SG++ + + VL+
Sbjct: 465 RLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQ 511
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 208/403 (51%), Gaps = 17/403 (4%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F LQ+ K+ ++ K+++ +I+ G + S+F+ +++ + + A +F
Sbjct: 13 FIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQV---S 69
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ L+NSI+R N LY + +++Y ++ RK L D FTFP + ++C +GS
Sbjct: 70 NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL-- 127
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ VH H+ + G + +V N LI MY K + D+ K+FD++ ++ ISWN + SG+
Sbjct: 128 --GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGY 185
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
A A LF M L+ V+WT+++S + G E MD F M+ GIE
Sbjct: 186 ARLGQMKKAKGLFHLM----LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDE 241
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
++ VL CA L + +GK IH + + GF V NALI +Y K G + A LF +
Sbjct: 242 ISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQ 301
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+E K+++SW+ +I+ YA G A+E F+++++ + +PN I++ ++ A + G
Sbjct: 302 MEGKDVISWSTMISGYAYHGNAHGAIETFNEMQR----AKVKPNGITFLGLLSACSHVGM 357
Query: 393 GEEALDLFRKMQLAKVVANSVTISG-LLSVCAESAALNIGREI 434
+E L F M+ + + G L+ V A + L EI
Sbjct: 358 WQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEI 400
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 196/632 (31%), Positives = 325/632 (51%), Gaps = 85/632 (13%)
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
G L A VF+ P + + W ++ G +A+ L++ M G + D FT
Sbjct: 93 GDLESAYKVFDRMP---DRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLS 149
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM---GQMSDSFKL 193
V+ AC MG S G+ H V++ G +V + L+ MYAK G + D+ K+
Sbjct: 150 GVVSACAEMG----LLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKV 205
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCD-GALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
FD++ V N +SW + +G+ + CD A+ELF M ++PN T++S
Sbjct: 206 FDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSS---------- 255
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
VL CA+L+ +G+ ++ V+K V N+
Sbjct: 256 -------------------------VLKACANLSDIWLGEQVYALVVKMRLASINCVGNS 290
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
LI +Y + G+++ A+ F + EK
Sbjct: 291 LISMYSRCGNMENARKAFDVLFEK------------------------------------ 314
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
N++S++ ++ A+A + EEA +LF +++ A N+ T + LLS + A+ G
Sbjct: 315 ---NLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGE 371
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
+IH +++ N+ + N L++MY +CG +E VF ++ ++I+W SMI+G+ +G
Sbjct: 372 QIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHG 431
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
AL TF +M+EAG P+ V ++AVLSACSH GL++EG + F M E I P+MEHY
Sbjct: 432 FATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHY 491
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
AC+VDLLGR+G L+EA ++V +MP + +A V T L +CR+H N D+ + A I
Sbjct: 492 ACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDP 551
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
+Y+LLSN++A++G+WE+ A++R K + L K AG SWIEV+ K+H F G++
Sbjct: 552 HDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFYVGDTSHP 611
Query: 673 DLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ + + L++LAL+++ G +P D +L ++
Sbjct: 612 QAQEIYDELDQLALKIKELGYIPSTDFVLHDV 643
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 189/387 (48%), Gaps = 47/387 (12%)
Query: 232 GLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMG 291
G + + V+W++L+S +A + E + F M + G V C++ +G
Sbjct: 2 GNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLG 61
Query: 292 KVIHGFVIKGG-FEDYVFVKNALICVYGK-HGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
K+I GF++K G FE V V ALI ++ K +GD++ A +F + ++N+V+W +IT +
Sbjct: 62 KIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQ 121
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+ G +AV+ LF M L+ V
Sbjct: 122 QLGFSRDAVD---------------------------------------LFLDMVLSGYV 142
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC---GCLEEG 466
+ T+SG++S CAE L++GR+ H V++ ++ ++ V L++MY KC G +++
Sbjct: 143 PDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDA 202
Query: 467 HLVFEQIEKKDLITWNSMISGYGMN-GLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
VF+++ ++++W ++I+GY + G A+ F EM++ KP+ F +VL AC++
Sbjct: 203 RKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACAN 262
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
+ G +++ ++V+ R+ ++ + R G ++ A ++ E N +
Sbjct: 263 LSDIWLGEQVYALVVK-MRLASINCVGNSLISMYSRCGNMENARKAF-DVLFEKNLVSYN 320
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLIT 612
T++N+ N++ A + ++I G T
Sbjct: 321 TIVNAYAKSLNSEEAFELFNEIEGAGT 347
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 131/252 (51%), Gaps = 11/252 (4%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + + +QV+ ++ + + ++S+Y+R G + +AR F+
Sbjct: 253 FSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLF 312
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + +N+I+ + E A +L+ ++ G + FTF ++ +G+
Sbjct: 313 ---EKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGA--- 366
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H+ +L+ GF+ N+HI N LI MY++ G + +F++F+++ N ISW M +
Sbjct: 367 -IGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMIT 425
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGIE 269
GFA + ALE F +M G+ PN VT+ ++LS+ + G + E + F M+ + GI
Sbjct: 426 GFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIV 485
Query: 270 VGAEAIAVVLSV 281
E A V+ +
Sbjct: 486 PRMEHYACVVDL 497
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 104/238 (43%), Gaps = 20/238 (8%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+Q+H++++ +G ++ + ++S+Y+R G + A VF + + W S++
Sbjct: 371 EQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMG---DGNVISWTSMITGF 427
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR---FRFSFGQIVHNHVLQ 164
+G AL+ + KM + GV + T+ V+ AC +G F ++ H V +
Sbjct: 428 AKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPR 487
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
M V + + + G + ++ +L + + K + ++ F G ++L
Sbjct: 488 MEHYACV------VDLLGRSGHLEEAMELVNSMPFK---ADALVLRTFLGACRVHGNMDL 538
Query: 225 FK---RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI--EVGAEAIAV 277
K M LE + + L + HA G+ EE ++ M++R + E G I V
Sbjct: 539 GKHAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEV 596
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 207/744 (27%), Positives = 352/744 (47%), Gaps = 115/744 (15%)
Query: 18 SRPFSIITYNNSLLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYA 74
S P +TY HL+ C ++ L +++H ++ L +LS+Y
Sbjct: 93 SSPLKSVTYT--------HLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYG 144
Query: 75 RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFT 134
+ G L +ARN+F++ P + + W S++ G +NA+ LYV+M + G + D FT
Sbjct: 145 KCGSLKEARNMFDSMPL---KNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFT 201
Query: 135 FPLVIRACKFMGSFRF---------RFSFGQ--IVHNHVL-------QMGFQGNVH---I 173
F ++++C + F+ + FG I N ++ QM NV I
Sbjct: 202 FGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRII 261
Query: 174 VNELIG---MYAKMGQMSDSFK--------LFDKVRVKNYISWNMMFSG----------- 211
+ +LI M A Q+ + L V N + FS
Sbjct: 262 IKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGR 321
Query: 212 --------FALNFD-------CD-----GALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
F L D CD G LE + + +P+ V W ++++ A
Sbjct: 322 QIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVS 381
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
+E+ F MR G+ + +L C++ + G +H +++K GF + V N
Sbjct: 382 NAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCN 441
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
+L+ +Y K ++ ++A++VF +
Sbjct: 442 SLLSMYSKCSNL-------------------------------NDALQVFEDIGN----- 465
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
+ +++SW+ ++ A + E L L + M +++ + VT++ +L + A+ +G
Sbjct: 466 --KADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVG 523
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
+IH +++ +N +I V N L+NMY KCG LE +F+ I D+I+W+S+I GY
Sbjct: 524 SQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQA 583
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G G+ A F M G KP+ + FV +L+ACSH G+V EG +++ M ++RI P EH
Sbjct: 584 GCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEH 643
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
+CMVDLL RAG L A D +K MP P+ VW TLL +C++H N +V + A + +
Sbjct: 644 CSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKID 703
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
+ + ++L NI+A+SG W+D A++R S + + KV GQSWIE+K K+H+F + ++L
Sbjct: 704 PSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLH 763
Query: 672 SDLKNVCEVLEELALQMENKGCVP 695
+ + +LEEL LQ+ + GC P
Sbjct: 764 PERGKIYTMLEELMLQILDDGCDP 787
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 82/130 (63%), Gaps = 2/130 (1%)
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
+A D+F+K + + SVT + L++ C+ +L GR+IH H++ + ++++QN +L
Sbjct: 83 KAFDIFQKCSSSPL--KSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHIL 140
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCG L+E +F+ + K++++W SMISGY G +NA+ + +M+ +G PD
Sbjct: 141 SMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHF 200
Query: 515 AFVAVLSACS 524
F +++ +CS
Sbjct: 201 TFGSIVKSCS 210
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 194/664 (29%), Positives = 319/664 (48%), Gaps = 84/664 (12%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LL C + L KQ+H+ L+ G + + +L +Y + G + +A +F++
Sbjct: 250 LLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGD--- 306
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+++ +LWN +L + ++ +M GV + FT+P ++R C G
Sbjct: 307 RTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTG----EIG 362
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H+ ++ GFQ ++++ LI MY+K G + + ++ D +
Sbjct: 363 LGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIE--------------- 407
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
E + V+WTS+++ + + +E ++ F M+ GI
Sbjct: 408 --------------------EKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNI 447
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+A +S CA + A H G IH A + V G DV +
Sbjct: 448 GLASAISACAGIKAVHQGSQIH----------------ARVYVSGYSADVSI-------- 483
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
WN L+ YA G+ EA F +E +G I+W+ +I FA +G
Sbjct: 484 -------WNGLVYLYARCGISKEAFSSFEAIEHKEG--------ITWNGLISGFAQSGLY 528
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
EEAL +F KM A N T +S A A + G++IH V++ + N L
Sbjct: 529 EEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNAL 588
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
+++Y KCG +E+ + F ++ K++ ++WN++I+ +G G AL F++M + G KP
Sbjct: 589 ISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSD 648
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
V FV VL+ACSH GLV EG F M E I P+ +HYAC+VD+LGRAG L A V+
Sbjct: 649 VTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVE 708
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
MP+ ++ VW TLL++C++HKN ++ E A + L + SY+LLSN YA +G+W
Sbjct: 709 EMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWAS 768
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
++R K +G++K G+SWIEVK +H F G+ L + L L ++ G
Sbjct: 769 RDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGY 828
Query: 694 VPDN 697
+N
Sbjct: 829 KQEN 832
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/524 (25%), Positives = 245/524 (46%), Gaps = 86/524 (16%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
+ ++H + I+ G + + ++ +YA+ G + AR VFE ++ W ++L
Sbjct: 61 VPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSV---RDNVSWVAVLSG 117
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
NGL E A++LY +M + GV+ + ++ AC F+ G+++H V + G
Sbjct: 118 YAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQL----GRLIHVQVYKQG 173
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F + N LI +Y + SF+L D+V +M++ CD
Sbjct: 174 FFSETFVGNALISLYLR----CRSFRLADRVFC------DMLY--------CDS------ 209
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
VT+ +L+S HA+CG + + +FD M+ G+ + IA +L+ C+ +
Sbjct: 210 -----------VTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVG 258
Query: 287 ADHMGKVIHGFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
GK +H +++K G DY+ ++ +L+ +Y K GD+
Sbjct: 259 DLRKGKQLHSYLLKAGMSLDYI-MEGSLLDLYVKSGDI---------------------- 295
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+EA+++F S +R NV+ W+ ++ A+ ++ D+F +M
Sbjct: 296 ---------EEALQIFD--------SGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLA 338
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
A V N T +L C + + +G +IH ++ ++ V L++MY K G L++
Sbjct: 339 AGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDK 398
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
+ + IE+KD+++W SMI+GY + + AL TF+EM G PD + + +SAC+
Sbjct: 399 AQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAG 458
Query: 526 AGLVNEGRRIF-DMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
V++G +I + V + + + + +V L R G+ +EA
Sbjct: 459 IKAVHQGSQIHARVYVSGYSADVSI--WNGLVYLYARCGISKEA 500
Score = 159 bits (401), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 117/483 (24%), Positives = 220/483 (45%), Gaps = 81/483 (16%)
Query: 114 ENALKLYV-KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVH 172
E L L+ K R+ VLG F +RAC+ GS R R+ +H + G G
Sbjct: 23 EKLLPLFAAKCRQYMVLG-AVDFACALRACR--GSGR-RWPLVPEIHAKAIICGLSGYRI 78
Query: 173 IVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG 232
I N LI +YAK G + + ++F+++ V++ +SW
Sbjct: 79 IGNLLIDLYAKKGFVRRARRVFEELSVRDNVSW--------------------------- 111
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
++LS +A+ G EE + L+ M + G+ ++ +LS C +G+
Sbjct: 112 --------VAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGR 163
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+IH V K GF FV NALI +Y + ++A +F ++ + V++N LI+ +A+
Sbjct: 164 LIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQC- 222
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
G G+ AL +F +MQL+ + +S
Sbjct: 223 --------------------------------------GHGDRALGIFDEMQLSGLSPDS 244
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
VTI+ LL+ C+ L G+++H ++++ M+ + +++ LL++Y+K G +EE +F+
Sbjct: 245 VTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDS 304
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
++ +++ WN M+ YG + F M+ AG +P+ + +L C+H G + G
Sbjct: 305 GDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLG 364
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
+I + ++ + M ++D+ + G L +A I+ +M E + W +++
Sbjct: 365 EQIHSLTIKN-GFQSDMYVSGVLIDMYSKYGWLDKAQRIL-DMIEEKDVVSWTSMIAGYV 422
Query: 593 MHK 595
H+
Sbjct: 423 QHE 425
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 1/158 (0%)
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA-LNIGREIHGH 437
S++ + F + E+ L LF +V +V + L C S + EIH
Sbjct: 8 SFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPEIHAK 67
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
+ ++ ++ N L+++Y K G + VFE++ +D ++W +++SGY NGLGE A
Sbjct: 68 AIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEA 127
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
+ + EM +G P ++LSAC+ L GR I
Sbjct: 128 VRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLI 165
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 201/702 (28%), Positives = 357/702 (50%), Gaps = 66/702 (9%)
Query: 34 FDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L++ C ++ H ++IV G ++ +++A +++ Y++FG AR VF+T
Sbjct: 51 FPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMD 110
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + W +++ G ++ A +Y MR+ G+ T ++
Sbjct: 111 ---DRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGV-------L 160
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
Q +H V+Q GF +V + N ++ +Y K G++ D+ LF+ + ++ ISWN + S
Sbjct: 161 ELVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVS 220
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA---------------------- 248
G+A + L+L RM+ +G+EP+ T+ SL+S+ A
Sbjct: 221 GYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQ 280
Query: 249 -------------RCGRLEETMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
+CG + +F+ MM K I A +V + CAD+A +++
Sbjct: 281 DSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRML 340
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK----NIVSWNALITSYAE 350
V+ +++ + G + ++ I + +I S N+L+T YA+
Sbjct: 341 KSRVMPS-----TATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAK 395
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
G +++ VF + M R +++SW+A++ A NG +AL LF +M+ A+
Sbjct: 396 CGHLEQSCSVFDR--------MSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRP 447
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
+S+T+ LL CA AL+ G+ IH V + + IL+ L++MY KCG L F
Sbjct: 448 DSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCF 507
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
+++ ++DL++W+S+I+GYG +G GE AL + + + G +P+ V ++++LSACSH GLV+
Sbjct: 508 DRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVD 567
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
+G F M ++F IEP++EH AC+VDLL RAG ++EA K M +P+ V G LL++
Sbjct: 568 QGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDA 627
Query: 591 CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVA 650
CR N ++ + +A +I L G+Y+ L++ YA+ RW+ +V K+ LKK+
Sbjct: 628 CRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLP 687
Query: 651 GQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
G S+IE+ I F + +S + + VL+ L +M G
Sbjct: 688 GWSFIELHGTITTFFTDHSSHPQFEEIMLVLKILGSEMRKVG 729
Score = 166 bits (419), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 209/476 (43%), Gaps = 82/476 (17%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
+N+I+ + G + + L Y M D TFP +++AC + F SF H
Sbjct: 16 YNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSF----H 71
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
V+ G+ + +I LI Y+K G + K+FD +
Sbjct: 72 QRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMD--------------------- 110
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
+ N V WT+++ + R G + ++++MR++GI+ + + +L
Sbjct: 111 --------------DRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLL 156
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
S +L H+ + +H VI+ GF V + N+++ VY K G V+ AQ LF ++ +
Sbjct: 157 SGVLELV--HL-QCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDAR--- 210
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
+VISW++++ +A G E L L
Sbjct: 211 ------------------------------------DVISWNSLVSGYAQLGNIREVLQL 234
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
+M+ + + T L+S A + L +G+ +HGH++R + ++ ++ L+ MY+K
Sbjct: 235 LIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLK 294
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
CG + +FE + KD+I+W +MISG N + A+ F M+++ P +V
Sbjct: 295 CGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASV 354
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
L+AC+ G G + ++R+ RI+ + +V + + G L+++ + M
Sbjct: 355 LAACAELGSFPLGTSVHGYILRQ-RIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRM 409
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 8/166 (4%)
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
P S++A+I ++ G + L + M ++ T L+ C + G
Sbjct: 11 PATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSF 70
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
H V+ + + + L+N Y K G + VF+ ++ ++++ W +MI Y G
Sbjct: 71 HQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEH 130
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSA--------CSHAGLVNEG 532
+ A + + M G +P V + +LS C HA ++ G
Sbjct: 131 DVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQCLHACVIQYG 176
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 325 bits (832), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 195/661 (29%), Positives = 331/661 (50%), Gaps = 86/661 (13%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
++Q C L+ Q+H I F+ +L++Y+ G L + +F P
Sbjct: 268 VIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVP--- 324
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
S + LWNS++ + G + A+ L++KMR + D T +++ C +
Sbjct: 325 TSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSI--- 381
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
+G+ +H H ++ G + + ++ N L+ MY K Q++ + +F+K+R + ISWN M S F
Sbjct: 382 WGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAF- 440
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
A +F+ E LF MM + I+ +
Sbjct: 441 -------AQSMFRAKAFE---------------------------LFLMMCESEIKFNSY 466
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
I +L+ C D + G+ IHGF IK G E + +L +Y GD + A N+F+
Sbjct: 467 TIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRC 526
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
++++VS W+++I ++ N
Sbjct: 527 PQRDLVS---------------------------------------WNSLISSYIKNDNA 547
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR--VSMNKNILVQN 451
+AL LF M ++++ NSVTI +L+ C + A L +G+ +H + R VS+ + + N
Sbjct: 548 GKALLLFNHM-ISELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLAN 606
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
+ MY +CG L+ +F ++ + +++WN+MI+GYGM+G G +A F +M++ GFKP
Sbjct: 607 AFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKP 666
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
+ V+F +VLSACSH+GL G ++F MVR+F I PQ+ HY CMVDLLGR G EA
Sbjct: 667 NNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAF 726
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
+ +MP+EP+A +W LL+SC++ N + E + ++ L G+++LLSNIYAA+G W
Sbjct: 727 INSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLW 786
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
+ ++R + +GL K G SWI + ++H F++ + L + + E L L + +
Sbjct: 787 SEVVQIRKWLRERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDL 846
Query: 692 G 692
G
Sbjct: 847 G 847
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 147/609 (24%), Positives = 257/609 (42%), Gaps = 119/609 (19%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++ Y + G + +A VF P + + WN+++ V Y+ A+ L+V+M+K G+
Sbjct: 101 LVDFYCKCGLVAEASKVFVEMP---ERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGL 157
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG-FQGNVHIVNELIGMYAKMGQM 187
+ T ++ AC M R GQ +H + L+ G F + ++ L+G Y + +
Sbjct: 158 TPNSRTVVALLLACGEMLELRL----GQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV 213
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW------- 240
S ++F + V+N +SWN + +GF DC AL+L+ M +EG++ + VT
Sbjct: 214 L-SHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQAC 272
Query: 241 ----------------------------TSLLSSHARCGRLEETMDLFDMMRKR------ 266
+LL+ ++ G LE + LF+ +
Sbjct: 273 AEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWN 332
Query: 267 -------GIEVGAEAI------------------AVVLSVCADLAADHM-GKVIHGFVIK 300
G AEAI A++LS+C DL + G+ +H +K
Sbjct: 333 SMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMK 392
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G E ++ NAL+ +Y KH + AQ +F ++ +++SWN +I+++A+
Sbjct: 393 SGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQ---------- 442
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
SM R +A +LF M +++ NS TI LL+
Sbjct: 443 ----------SMFRA-------------------KAFELFLMMCESEIKFNSYTIVSLLA 473
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
C + + L GR IHG ++ + N + L MY+ CG +F + ++DL++
Sbjct: 474 FCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVS 533
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WNS+IS Y N AL F MI +P+ V + +L++C+ + G+ +
Sbjct: 534 WNSLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTT 592
Query: 541 -REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH-KNTD 598
RE +E + + R G LQ A I + + W ++ MH + D
Sbjct: 593 RREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTR-SIVSWNAMITGYGMHGRGRD 651
Query: 599 VAEAMASQI 607
A A +
Sbjct: 652 ATLAFAQML 660
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/568 (23%), Positives = 245/568 (43%), Gaps = 108/568 (19%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WNSI++ + L Y +M LG+ D T PLV++AC + + G +H
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAI----GNGVRIH 83
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+ + + +V + L+ Y K G ++++ K+F
Sbjct: 84 SCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVF------------------------- 118
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
+E E + V+W +L+S + C +E + LF M+K G+ + + +L
Sbjct: 119 ----------VEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALL 168
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDY-VFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
C ++ +G+ IHG+ ++ G D +V AL+ Y + D ++ +FS + +NI
Sbjct: 169 LACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRF-DAVLSHRVFSLMLVRNI 227
Query: 339 VSWNALITSYAEAGLCDEAVEVFS-------------------------------QLEKL 367
VSWNA+IT + G C +A++++S QL +L
Sbjct: 228 VSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQL 287
Query: 368 ---------------------DGGSMERP----NVIS------WSAVIGAFASNGRGEEA 396
D GS+E N + W+++I ++ G EA
Sbjct: 288 AIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEA 347
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNI-GREIHGHVVRVSMNKNILVQNGLLN 455
+ LF KM+L ++ + TI+ +LS+C + +I GR +H H ++ + + + N LL+
Sbjct: 348 IALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLS 407
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY+K + VFE++ D+I+WN+MIS + + A F M E+ K +
Sbjct: 408 MYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYT 467
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
V++L+ C + GR I ++ +E + ++ G + A+++
Sbjct: 468 IVSLLAFCKDGSDLVFGRSIHGFAIKN-GLEINTSLNTSLTEMYINCGDERAATNMFTRC 526
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
P + + W +L++S KN + +A+
Sbjct: 527 P-QRDLVSWNSLISS--YIKNDNAGKAL 551
>gi|297823509|ref|XP_002879637.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325476|gb|EFH55896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 325 bits (832), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 188/634 (29%), Positives = 327/634 (51%), Gaps = 30/634 (4%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L +++ S+ A+ GR+ AR +F+ ++ WN++L GL++ A+ L+ ++R
Sbjct: 7 LTSKIASL-AKSGRITSARQMFDEMT---DRDTVAWNTMLTSYSHLGLHQEAIALFTQLR 62
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
D ++F ++ C +G+ R G+ + + V++ GF + + N LI MY K
Sbjct: 63 FSDSKPDDYSFTAILSTCGSLGNVRL----GRKIQSLVIRSGFCASSPVNNSLIDMYGKC 118
Query: 185 GQMSDSFKLFDKV--RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV--TW 240
+ K+F + +N ++W + + + AL++F M P V W
Sbjct: 119 SDTLSANKVFRDMCCHSRNEVTWCSLLFAYMNAEQFEAALDVFVEM------PKRVPFAW 172
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
++S HA+CG++E + LF M + E + +++ CAD + G ++H +++
Sbjct: 173 NIMISGHAQCGKIESCLRLFKEMLESEFEPDCFTFSSLMNACADSSNVVYGWMVHAVMVR 232
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G+ V KN+++ Y K G IE VSWN++I + + G D+A+EV
Sbjct: 233 NGWYSAVEAKNSVLSFYAKLGCKDDVMRELESIEVLTQVSWNSIIDACVKVGETDKALEV 292
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
F + N+++W+ +I + NG GE+AL F +M + V ++ +L
Sbjct: 293 FRLAPE--------KNIVTWTTMIAGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLH 344
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
C+ A L G+ IHG ++ V N L+N+Y KCG ++E + F I KDL++
Sbjct: 345 ACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKESNRAFGDIANKDLVS 404
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WN+M+ +G++GL + AL ++ MI +G KPD V F+ +L+ CSH+GLV +G IF+ MV
Sbjct: 405 WNTMLFAFGVHGLADQALELYDNMIASGIKPDNVTFIGLLTTCSHSGLVEKGCAIFESMV 464
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM----EPNAYVWGTLLNSCRMHKN 596
+++ I +++H CM+D+ GR G L EA D+ N W LL +C H +
Sbjct: 465 KDYGIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYNSLVINASNNSSWEALLGACSTHWH 524
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
T++ ++ + S++LLSN+Y +SGRW++A +VR +G++K G SWIE
Sbjct: 525 TELGREVSKVLKIAEPSEELSFVLLSNLYCSSGRWKEAEEVRREMVERGMRKTPGCSWIE 584
Query: 657 VKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
V ++ F G S L+ + E L L +M N
Sbjct: 585 VGNRVSTFVVGGSSHPRLEELSETLNCLQHEMRN 618
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 192/432 (44%), Gaps = 82/432 (18%)
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRKRG-------------IEVGAEAIAV------ 277
V TS ++S A+ GR+ +FD M R + + EAIA+
Sbjct: 4 LVRLTSKIASLAKSGRITSARQMFDEMTDRDTVAWNTMLTSYSHLGLHQEAIALFTQLRF 63
Query: 278 ------------VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
+LS C L +G+ I VI+ GF V N+LI +YGK D
Sbjct: 64 SDSKPDDYSFTAILSTCGSLGNVRLGRKIQSLVIRSGFCASSPVNNSLIDMYGKCSDTLS 123
Query: 326 AQNLFSEI--EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
A +F ++ +N V+W +L+ +Y A + A++VF ++ K P +W+ +
Sbjct: 124 ANKVFRDMCCHSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPK------RVP--FAWNIM 175
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
I A G+ E L LF++M ++ + T S L++ CA+S+ + G +H +VR
Sbjct: 176 ISGHAQCGKIESCLRLFKEMLESEFEPDCFTFSSLMNACADSSNVVYGWMVHAVMVRNGW 235
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIE----------------------------- 474
+ +N +L+ Y K GC ++ E IE
Sbjct: 236 YSAVEAKNSVLSFYAKLGCKDDVMRELESIEVLTQVSWNSIIDACVKVGETDKALEVFRL 295
Query: 475 --KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+K+++TW +MI+GYG NG GE AL F EM+++G D A+ AVL ACS L+ G
Sbjct: 296 APEKNIVTWTTMIAGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHG 355
Query: 533 RRIFDMMVREFRIEPQMEHYA----CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ M+ I + YA +V+L + G ++E++ ++ + W T+L
Sbjct: 356 K-----MIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKESNRAFGDIA-NKDLVSWNTML 409
Query: 589 NSCRMHKNTDVA 600
+ +H D A
Sbjct: 410 FAFGVHGLADQA 421
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 107/246 (43%), Gaps = 21/246 (8%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ +L C + L K +H LI G A++ ++++YA+ G + ++ F
Sbjct: 339 YGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKESNRAFG--- 395
Query: 91 FDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
D + L+ WN++L +GL + AL+LY M G+ D TF ++ C G
Sbjct: 396 -DIANKDLVSWNTMLFAFGVHGLADQALELYDNMIASGIKPDNVTFIGLLTTCSHSGLVE 454
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK-----VRVKNYIS 204
+ I + V G V V +I M+ + G ++++ L + N S
Sbjct: 455 KGCA---IFESMVKDYGIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYNSLVINASNNSS 511
Query: 205 WNMMFSGFALNFDCDGALELFKRMEL--EGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
W + + ++ + E+ K +++ E +FV ++L S GR +E ++
Sbjct: 512 WEALLGACSTHWHTELGREVSKVLKIAEPSEELSFVLLSNLYCSS---GRWKEAEEVRRE 568
Query: 263 MRKRGI 268
M +RG+
Sbjct: 569 MVERGM 574
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 325 bits (832), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 188/642 (29%), Positives = 321/642 (50%), Gaps = 81/642 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+ +H + T S F+ + ++ +Y + G++ + VF+ P + + W +I+
Sbjct: 88 ESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPL---RNVVSWTAIIAGL 144
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
V G + AL + M V D +TF ++AC G+ ++G+ +H L+ GF
Sbjct: 145 VRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGAL----NYGREIHCQTLKKGF 200
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ N L MY K G++ D L LF+
Sbjct: 201 TAVSFVANTLATMYNKCGKL-------------------------------DYGLRLFES 229
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M + + V+WT+++ S+ + G+ E + F MR+ + A V+S CA L
Sbjct: 230 MT----QRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGR 285
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
G+ +H VI+ G D + V N+++ +Y K + +A +F
Sbjct: 286 IEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQ---------------- 329
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
+ R ++ISWS +I +A G GEEA D M+
Sbjct: 330 -----------------------GLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREG 366
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
N + +LSVC A L G+++H HV+ V + +N +VQ+ L+NMY KCG ++E
Sbjct: 367 PRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEAS 426
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
+F++ E ++++W +MI+GY +G + A+ F+++ + G +PD V F+AVL+ACSHAG
Sbjct: 427 KIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAG 486
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
LV+ G F+ + + +I P +HY CM+DLL RAG L +A ++++MP + + VW TL
Sbjct: 487 LVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTL 546
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
L +CR+H + D + A +I L +++ L+N+YAA G+W++AA+VR K+KG+
Sbjct: 547 LRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVV 606
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
K G SWI+ K ++ F SG+ + + + +VL+ LA Q E
Sbjct: 607 KEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLASQAE 648
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 178/367 (48%), Gaps = 51/367 (13%)
Query: 25 TYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
T++++L C D ++ +++H Q + G A +F+A + ++Y + G+L
Sbjct: 171 TFSSALKACADS-----GALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLR 225
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKF 144
+FE+ + + W +I+ NV G ENA+K + +MR+ V + FTF VI C
Sbjct: 226 LFESMT---QRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCAT 282
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
+G R +G+ +H HV++ G ++ + N ++ MY+K Q+ + +F + ++ IS
Sbjct: 283 LG----RIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIIS 338
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
W+ M SG+A + A + M EG PN
Sbjct: 339 WSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEF-------------------------- 372
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
A A VLSVC ++A GK +H V+ G E V++ALI +Y K G +K
Sbjct: 373 ---------AFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIK 423
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A +F E E NIVSW A+I YAE G EA+++F +L K+ RP+ +++ AV+
Sbjct: 424 EASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVG----LRPDSVTFIAVL 479
Query: 385 GAFASNG 391
A + G
Sbjct: 480 AACSHAG 486
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 198/454 (43%), Gaps = 78/454 (17%)
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGIEVGAEAIAV 277
+ A +LF +M L+ + ++WT+++S + E + LF M + G+ + +++
Sbjct: 18 NNARQLFDKM----LQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSL 73
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
L C + G+ +HG+ +K F + VFV +AL+ +Y K G V
Sbjct: 74 ALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKV-------------- 119
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
DE VF + M NV+SW+A+I G +EAL
Sbjct: 120 -----------------DEGCIVFKE--------MPLRNVVSWTAIIAGLVRAGYNKEAL 154
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
F M + KV ++ T S L CA+S ALN GREIH ++ V N L MY
Sbjct: 155 AYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMY 214
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG L+ G +FE + ++D+++W ++I G ENA+ F M E P+ F
Sbjct: 215 NKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFA 274
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEP---------------QME------------ 550
AV+S C+ G + G ++ ++R ++ Q++
Sbjct: 275 AVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRR 334
Query: 551 ---HYACMVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTLLNSCRMHKNTDVAEAMA 604
++ M+ + G +EA D + M E PN + + ++L+ C + + +
Sbjct: 335 DIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLH 394
Query: 605 SQIFGL-ITETTGSYMLLSNIYAASGRWEDAAKV 637
+ + + + + T L N+Y+ G ++A+K+
Sbjct: 395 AHVLCVGLEQNTMVQSALINMYSKCGSIKEASKI 428
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 175/381 (45%), Gaps = 53/381 (13%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++ C T+ +++ Q+H +I G S +A ++++Y++ +L A VF+
Sbjct: 273 FAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLS 332
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + W++++ G E A MR+ G + F F V+ C M
Sbjct: 333 ---RRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQ 389
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H HVL +G + N + + LI MY+K G + ++ K+FD+ N +SW M +
Sbjct: 390 ----GKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMIN 445
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
G+A + A++LFK++ GL P+ VT+ ++L++ + G ++ F+ + K
Sbjct: 446 GYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSK----- 500
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
V +C + DH G +I L+C G+ D A+++
Sbjct: 501 -------VHQICP--SKDHYGCMID-----------------LLCRAGRLND---AESMI 531
Query: 331 SEIE-EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN-VISWSAVIGAFA 388
+ +++ V W+ L+ + G D ++ +LD PN ++ + +A
Sbjct: 532 QSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLD------PNCAVTHITLANMYA 585
Query: 389 SNGRGEEALDLFRKMQLAKVV 409
+ G+ +EA ++ RKM +K V
Sbjct: 586 AKGKWKEAAEV-RKMMKSKGV 605
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 325 bits (832), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 195/661 (29%), Positives = 331/661 (50%), Gaps = 86/661 (13%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
++Q C L+ Q+H I F+ +L++Y+ G L + +F P
Sbjct: 268 VIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVP--- 324
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
S + LWNS++ + G + A+ L++KMR + D T +++ C +
Sbjct: 325 TSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSI--- 381
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
+G+ +H H ++ G + + ++ N L+ MY K Q++ + +F+K+R + ISWN M S F
Sbjct: 382 WGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAF- 440
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
A +F+ E LF MM + I+ +
Sbjct: 441 -------AQSMFRAKAFE---------------------------LFLMMCESEIKFNSY 466
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
I +L+ C D + G+ IHGF IK G E + +L +Y GD + A N+F+
Sbjct: 467 TIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRC 526
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
++++VS W+++I ++ N
Sbjct: 527 PQRDLVS---------------------------------------WNSLISSYIKNDNA 547
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR--VSMNKNILVQN 451
+AL LF M ++++ NSVTI +L+ C + A L +G+ +H + R VS+ + + N
Sbjct: 548 GKALLLFNHM-ISELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLAN 606
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
+ MY +CG L+ +F ++ + +++WN+MI+GYGM+G G +A F +M++ GFKP
Sbjct: 607 AFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKP 666
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
+ V+F +VLSACSH+GL G ++F MVR+F I PQ+ HY CMVDLLGR G EA
Sbjct: 667 NNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAF 726
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
+ +MP+EP+A +W LL+SC++ N + E + ++ L G+++LLSNIYAA+G W
Sbjct: 727 INSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLW 786
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
+ ++R + +GL K G SWI + ++H F++ + L + + E L L + +
Sbjct: 787 SEVVQIRKWLRERGLGKPPGTSWIVIGNQVHHFTATDVLHPQSERIYENLNSLTSLIRDL 846
Query: 692 G 692
G
Sbjct: 847 G 847
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 147/609 (24%), Positives = 257/609 (42%), Gaps = 119/609 (19%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++ Y + G + +A VF P + + WN+++ V Y+ A+ L+V+M+K G+
Sbjct: 101 LVDFYCKCGLVAEASKVFVEMP---ERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGL 157
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG-FQGNVHIVNELIGMYAKMGQM 187
+ T ++ AC M R GQ +H + L+ G F + ++ L+G Y + +
Sbjct: 158 TPNSRTVVALLLACGEMLELRL----GQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV 213
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW------- 240
S ++F + V+N +SWN + +GF DC AL+L+ M +EG++ + VT
Sbjct: 214 L-SHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQAC 272
Query: 241 ----------------------------TSLLSSHARCGRLEETMDLFDMMRKR------ 266
+LL+ ++ G LE + LF+ +
Sbjct: 273 AEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWN 332
Query: 267 -------GIEVGAEAI------------------AVVLSVCADLAADHM-GKVIHGFVIK 300
G AEAI A++LS+C DL + G+ +H +K
Sbjct: 333 SMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMK 392
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G E ++ NAL+ +Y KH + AQ +F ++ +++SWN +I+++A+
Sbjct: 393 SGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQ---------- 442
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
SM R +A +LF M +++ NS TI LL+
Sbjct: 443 ----------SMFRA-------------------KAFELFLMMCESEIKFNSYTIVSLLA 473
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
C + + L GR IHG ++ + N + L MY+ CG +F + ++DL++
Sbjct: 474 FCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVS 533
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WNS+IS Y N AL F MI +P+ V + +L++C+ + G+ +
Sbjct: 534 WNSLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTT 592
Query: 541 -REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH-KNTD 598
RE +E + + R G LQ A I + + W ++ MH + D
Sbjct: 593 RREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTR-SIVSWNAMITGYGMHGRGRD 651
Query: 599 VAEAMASQI 607
A A +
Sbjct: 652 ATLAFAQML 660
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/568 (23%), Positives = 245/568 (43%), Gaps = 108/568 (19%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WNSI++ + L Y +M LG+ D T PLV++AC + + G +H
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAI----GNGVRIH 83
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+ + + +V + L+ Y K G ++++ K+F
Sbjct: 84 SFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVF------------------------- 118
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
+E E + V+W +L+S + C +E + LF M+K G+ + + +L
Sbjct: 119 ----------VEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALL 168
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDY-VFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
C ++ +G+ IHG+ ++ G D +V AL+ Y + D ++ +FS + +NI
Sbjct: 169 LACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRF-DAVLSHRVFSLMLVRNI 227
Query: 339 VSWNALITSYAEAGLCDEAVEVFS-------------------------------QLEKL 367
VSWNA+IT + G C +A++++S QL +L
Sbjct: 228 VSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQL 287
Query: 368 ---------------------DGGSMERP----NVIS------WSAVIGAFASNGRGEEA 396
D GS+E N + W+++I ++ G EA
Sbjct: 288 AIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEA 347
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNI-GREIHGHVVRVSMNKNILVQNGLLN 455
+ LF KM+L ++ + TI+ +LS+C + +I GR +H H ++ + + + N LL+
Sbjct: 348 IALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNALLS 407
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY+K + VFE++ D+I+WN+MIS + + A F M E+ K +
Sbjct: 408 MYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYT 467
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
V++L+ C + GR I ++ +E + ++ G + A+++
Sbjct: 468 IVSLLAFCKDGSDLVFGRSIHGFAIKN-GLEINTSLNTSLTEMYINCGDERAATNMFTRC 526
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
P + + W +L++S KN + +A+
Sbjct: 527 P-QRDLVSWNSLISS--YIKNDNAGKAL 551
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 325 bits (832), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 223/782 (28%), Positives = 361/782 (46%), Gaps = 146/782 (18%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H + V G FL +L Y+ GRL DAR++F+ P + + W S++ +
Sbjct: 40 IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMP---HRNLVSWGSVISMYTQ 96
Query: 110 NGLYENALKLYVKMRKLGV-LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+G + A+ L+V +K + + F V+RAC + S G+ VH +++
Sbjct: 97 HGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKA----VSLGEQVHGIAVKLDLD 152
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG-ALELFKR 227
NV++ LI +YAK+G M ++ +F + V+ ++WN + +G+A C G ALELF R
Sbjct: 153 ANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYA-QIGCGGVALELFDR 211
Query: 228 MELEGLEPNFVTWTSLLSS-----------------------------------HARCGR 252
M +EG+ P+ S +S+ + +C R
Sbjct: 212 MGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSR 271
Query: 253 LEETMDLFDMMRKRGI-------------EVGAEAIAV------------------VLSV 281
L LFD M R + AEAI + +L+
Sbjct: 272 LSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNS 331
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
C LAA G+ IH VIK E +VKNALI +Y K + A+ +F + E + +S+
Sbjct: 332 CGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISY 391
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE------- 394
NA+I Y++ EAV +F ++ RP+++++ +++G +S E
Sbjct: 392 NAMIEGYSKNRDLAEAVNIFQRMRFFS----LRPSLLTFVSLLGVSSSQLAIELSKQIHG 447
Query: 395 ------EALDLFRKMQLAKVVA-------------------------------------- 410
+LDL+ L V +
Sbjct: 448 LIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEE 507
Query: 411 -----NSVTISGL----------LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
N + +SG+ ++V + A++ G++ H +++ ++ + V N L++
Sbjct: 508 AIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALID 567
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY KCG ++EG ++FE +D+I WNSMI+ Y +G E AL F M EA +P+ V
Sbjct: 568 MYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVT 627
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
FV VLSAC+HAG V EG F+ M + IEP +EHYA +V+L GR+G L A + ++ M
Sbjct: 628 FVGVLSACAHAGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERM 687
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
P++P A VW +LL++C + N ++ A +G Y+LLSNIYA+ G W D
Sbjct: 688 PIKPAAAVWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVH 747
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
+R + G K G SWIEV +++H F + + + VL+EL ++N G VP
Sbjct: 748 NLRQQMDSSGTVKETGCSWIEVTKEVHTFIVRGREHPEAELIYSVLDELTSLIKNLGYVP 807
Query: 696 DN 697
D
Sbjct: 808 DT 809
Score = 152 bits (385), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 205/469 (43%), Gaps = 84/469 (17%)
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
V+ +C G R R +H G ++ + N L+ Y+ +G++ D+ LFD++
Sbjct: 21 VLLSCLPTGGDRLR-RLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRM 79
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
+N +SW S++S + + GR + +
Sbjct: 80 PHRNLVSWG-----------------------------------SVISMYTQHGRDDCAI 104
Query: 258 DLFDMMRKRGIEVGAE-AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
LF +K EV E +A VL C A +G+ +HG +K + V+V ALI +
Sbjct: 105 SLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINL 164
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
Y K G + A +F + + V+WN +IT YA+ G
Sbjct: 165 YAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGC----------------------- 201
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
G AL+LF +M + V + ++ +S C+ L GR+IHG
Sbjct: 202 ----------------GGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHG 245
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
+ R + + V N L+++Y KC L +F+ +E ++L++W +MISGY N
Sbjct: 246 YAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAE 305
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA--C 554
A+ F M +AG++PDG A ++L++C + +GR+I +++ + + + Y
Sbjct: 306 AITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKA---DLEADEYVKNA 362
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
++D+ + L EA + + E +A + ++ KN D+AEA+
Sbjct: 363 LIDMYAKCEHLTEARAVFDALA-EDDAISYNAMIEG--YSKNRDLAEAV 408
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 145/328 (44%), Gaps = 43/328 (13%)
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKV---IHGFVIKGGFEDYVFVKNALICVYGKHG 321
R ++A VL C D + ++ IH G D +F+ N L+ Y G
Sbjct: 8 SRAPSTHIRSLARVLLSCLPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLG 67
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
++ A++LF + +N+VSW ++I+ Y + G D A+ +F +K S E P
Sbjct: 68 RLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQK---ASCEVP------ 118
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
N ++ +L C +S A+++G ++HG V++
Sbjct: 119 -----------------------------NEFLLASVLRACTQSKAVSLGEQVHGIAVKL 149
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
++ N+ V L+N+Y K GC++E LVF + + +TWN++I+GY G G AL F
Sbjct: 150 DLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELF 209
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
+ M G +PD + +SACS G + GR+I R E ++DL +
Sbjct: 210 DRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRS-ATETDTSVINVLIDLYCK 268
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLN 589
L A + M N W T+++
Sbjct: 269 CSRLSAARKLFDCMEYR-NLVSWTTMIS 295
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 325 bits (832), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/567 (31%), Positives = 305/567 (53%), Gaps = 37/567 (6%)
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS---FKLFDKVRVKNYISWNMMFSGF 212
Q +H +L+ G + ++LI YA ++ S F F + ++ N + +
Sbjct: 75 QELHAQLLKHGLHLDPLAASKLISSYALQRRLPASRRIFASFPNPQATTFLP-NTLLRAY 133
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
ALN A+ LF M + + T++ L+ + + G + + +++G+
Sbjct: 134 ALNALPHAAVSLFSAMP----QRDSFTYSFLIKALSSSG-----LTPLRAVHSHVVKLGS 184
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
V + D + + G + V + N+ + + G+V A+ +F E
Sbjct: 185 IEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVRQGEVASARRMFDE 244
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFS-----------------------QLEKLDG 369
+ +K+ VSWN ++ Y +AG ++A E+F ++ ++
Sbjct: 245 MPDKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVSGYCKKGDIEMARVIF 304
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
M N+++W+ ++ A A NG EEA LF +M+ A V + + +L+ CAES +L
Sbjct: 305 DKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVVSILAACAESGSLA 364
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE-QIEKKDLITWNSMISGY 488
+G+ IH +V + ++ V N +++M+ KCGC+ VF+ +I +KD ++WN++I G+
Sbjct: 365 LGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFDTEIAEKDSVSWNTIIGGF 424
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
M+G G+ AL F +M GF+PD V + VLSAC+H G V EGR+ F M R++ I PQ
Sbjct: 425 AMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVEEGRQHFSNMERDYGIVPQ 484
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
+EHY CM+DLLGR GL++EA ++K+MP +PN +WG+LL++CR+HKN + AE +++
Sbjct: 485 IEHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEVIWGSLLSACRLHKNVEYAEIAVNELS 544
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L G+Y +LSNIYA +G+W D AK R+ K G +K AG SWIE+ H F+ G+
Sbjct: 545 KLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKSAGSSWIELDEAFHEFTVGD 604
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVP 695
SD + E+++ L+ +++ GCVP
Sbjct: 605 RKHSDSDQISEMVDRLSSHVKDVGCVP 631
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 200/433 (46%), Gaps = 76/433 (17%)
Query: 31 LDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
L H LQ +H ++++H QL+ G + A++++S YA RL +R +F + P
Sbjct: 61 LASLPHGLQH---LHHVQELHAQLLKHGLHLDPLAASKLISSYALQRRLPASRRIFASFP 117
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ ++++ L N++LR N L A+ L+ M + D FT+ +I+A G
Sbjct: 118 -NPQATTFLPNTLLRAYALNALPHAAVSLFSAMPQR----DSFTYSFLIKALSSSGLTPL 172
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK--------------------------- 183
R VH+HV+++G + ++ N LI Y+K
Sbjct: 173 R-----AVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAMA 227
Query: 184 ----MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL------ 233
G+++ + ++FD++ K+ +SWN + G+ + A ELF+ M +
Sbjct: 228 AMVRQGEVASARRMFDEMPDKDTVSWNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTV 287
Query: 234 ---------------------EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
N VTWT ++S+ A+ G +EE LF M++ +E+
Sbjct: 288 VSGYCKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDV 347
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF-S 331
A+ +L+ CA+ + +GK IH +V V NA+I ++ K G V A +F +
Sbjct: 348 AAVVSILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFDT 407
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
EI EK+ VSWN +I +A G D+A++ F+Q+ KL G RP+ ++ V+ A G
Sbjct: 408 EIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQM-KLQGF---RPDAVTMINVLSACTHMG 463
Query: 392 RGEEALDLFRKMQ 404
EE F M+
Sbjct: 464 FVEEGRQHFSNME 476
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 153/327 (46%), Gaps = 24/327 (7%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
V+S Y + G + AR +F+ P + + W ++ NGL E A +L+ +M++ V
Sbjct: 287 VVSGYCKKGDIEMARVIFDKMP---TKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAV 343
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D ++ AC GS + G+ +H +V + H+ N +I M+ K G ++
Sbjct: 344 ELDVAAVVSILAACAESGSL----ALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVN 399
Query: 189 DSFKLFD-KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
+ +FD ++ K+ +SWN + GFA++ D AL+ F +M+L+G P+ VT ++LS+
Sbjct: 400 RADYVFDTEIAEKDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSAC 459
Query: 248 ARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH---GFVIKGGF 303
G +EE F +M R GI E ++ + G +I G + +
Sbjct: 460 THMGFVEEGRQHFSNMERDYGIVPQIEHYGCMIDLLG------RGGLIEEAVGLIKSMPW 513
Query: 304 EDYVFVKNALICVYGKHGDVKVAQ---NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
+ + +L+ H +V+ A+ N S+++ N ++ L YAEAG + +
Sbjct: 514 DPNEVIWGSLLSACRLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKA 573
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAF 387
Q++ G ++ SW + AF
Sbjct: 574 RMQMK---GTGSQKSAGSSWIELDEAF 597
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 285/536 (53%), Gaps = 79/536 (14%)
Query: 173 IVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG 232
++N LI MY K G + D+ +FDK+
Sbjct: 2 LINILINMYVKFGLLHDAQDVFDKMP---------------------------------- 27
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
+ N V+WT+++S+++ ++ ++ +M + G+ + VL C L +
Sbjct: 28 -DRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDGLFN---LR 83
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+H +IK G + VFV++ALI VY + G++
Sbjct: 84 QLHCCIIKIGLDSDVFVRSALIDVYSRWGEL----------------------------- 114
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+ A+ VF + M +++ WS++I FA N G+EAL LF++M+ A +A
Sbjct: 115 --ENALRVFDE--------MVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQ 164
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
T++ +L C A L +GR++H HV++ ++++++ N LL+MY KCG LE+ + VF +
Sbjct: 165 TTLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVR 222
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+ +KD+I+W++MI+G NG + AL FE M G KP+ V V VL ACSHAGLV EG
Sbjct: 223 MVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEG 282
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
F M F I+P EHY CM+DLLGRAG L EA D++ M EP+A W LLN+CR
Sbjct: 283 LYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACR 342
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
+H+N DVA A QI L + G+Y+LLSNIYA + RW D A+VR + +G+KK G
Sbjct: 343 VHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGC 402
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKK 708
SWIEV ++IH F G+ ++ + L +L ++ G VPD + +L ++ G++
Sbjct: 403 SWIEVSKQIHAFILGDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQ 458
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 169/341 (49%), Gaps = 51/341 (14%)
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM 123
FL ++++Y +FG L DA++VF+ P + + W +++ + L + AL+ V M
Sbjct: 1 FLINILINMYVKFGLLHDAQDVFDKMP---DRNVVSWTTMISAYSAAKLNDKALEFLVLM 57
Query: 124 RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
+ GV + FT+ V+RAC G F R +H ++++G +V + + LI +Y++
Sbjct: 58 LREGVRPNMFTYSSVLRACD--GLFNLR-----QLHCCIIKIGLDSDVFVRSALIDVYSR 110
Query: 184 MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
G++ ++ ++FD++ + + W+ + +GFA N D D AL LFKRM+ G T TS
Sbjct: 111 WGELENALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTS- 169
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
VL C LA +G+ +H V+K +
Sbjct: 170 ----------------------------------VLRACTGLALLELGRQVHVHVLK--Y 193
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
+ + + NAL+ +Y K G ++ A +F + EK+++SW+ +I A+ G EA+++F
Sbjct: 194 DQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFES 253
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
++ L +PN ++ V+ A + G EE L F M+
Sbjct: 254 MKVLG----IKPNYVTIVGVLFACSHAGLVEEGLYYFHSMK 290
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 165/337 (48%), Gaps = 46/337 (13%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+ +L+ C + L+Q+H +I G ++ F+ + ++ +Y+R+G L +A VF+
Sbjct: 69 YSSVLRACDGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEM---V 125
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
++W+SI+ N + AL+L+ +M++ G L T V+RAC +
Sbjct: 126 TGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALL----E 181
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ VH HVL+ + ++ + N L+ MY K G + D+ +F ++ K+ ISW+ M +G A
Sbjct: 182 LGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAGLA 239
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGA 272
N AL+LF+ M++ G++PN+VT +L + + G +EE + F M++ GI+ G
Sbjct: 240 QNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGR 299
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
E H G +I + G+ G + A +L +E
Sbjct: 300 E---------------HYG--------------------CMIDLLGRAGRLSEAVDLINE 324
Query: 333 IE-EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
+E E + V+W AL+ + D A+ Q+ +LD
Sbjct: 325 MECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLD 361
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/443 (36%), Positives = 266/443 (60%), Gaps = 24/443 (5%)
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
++ C+ ++ G+ +HG + K GF+ +VFV+ AL+ YG G + A+ +F E+ E++
Sbjct: 16 LVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEARRVFDEMSERD 75
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLE---------KLDGGSMER------------PN 376
+ +W +I+ +A G A ++F ++ +DG S R PN
Sbjct: 76 VFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESAELLFSQMPN 135
Query: 377 --VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
+ISW+ +I ++ N + EAL +F +MQ + + VT++ ++S CA AL++G+EI
Sbjct: 136 RDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGALDLGKEI 195
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
H + + + + ++ + + L++MY KCG L++ +VF ++ KK+L WNS+I G ++G
Sbjct: 196 HLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIEGLAVHGYA 255
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
E ALA F M KP+GV F++VL AC+HAGLV EGR+ F M R+F I P++EHY C
Sbjct: 256 EEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSMSRDFSIPPEIEHYGC 315
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
MVDLLG+AGLL++A ++V++M MEPN+ +WG LL C++H+N +A+ ++ L
Sbjct: 316 MVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKIAQVAVNESKVLEPNN 375
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVA-GQSWIEVKRKIHMFSSGNSLQSD 673
+G Y LL N+YA RW + A +R + K G++K + G SWIE+ RKIH F++ +
Sbjct: 376 SGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSSWIEMDRKIHQFAASDKSHLA 435
Query: 674 LKNVCEVLEELALQMENKGCVPD 696
+ +L EL Q++ G VP+
Sbjct: 436 SDEIYTLLVELDGQLKLSGYVPE 458
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 153/304 (50%), Gaps = 47/304 (15%)
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY----------- 181
FTF +++AC + FG+ VH H+ + GF +V + L+ Y
Sbjct: 11 FTFSSLVKACSLVS----ELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEARR 66
Query: 182 --------------------AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
A+ G MS + +LFD++ V+N SWN M G++ + + A
Sbjct: 67 VFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEMPVRNTASWNAMIDGYSRLRNVESA 126
Query: 222 LELFKRMELEGLEPN--FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
LF +M PN ++WT++++ +++ + E + +F+ M+ GI+ +A ++
Sbjct: 127 ELLFSQM------PNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATII 180
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
S CA L A +GK IH + ++ GF+ V++ +ALI +Y K G + + +F ++ +KN+
Sbjct: 181 SACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLF 240
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
WN++I A G +EA+ +FS++++ +PN +++ +V+GA G EE
Sbjct: 241 CWNSIIEGLAVHGYAEEALAMFSRMQR----EKIKPNGVTFISVLGACTHAGLVEEGRKR 296
Query: 400 FRKM 403
F M
Sbjct: 297 FLSM 300
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%)
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
M A+V S T S L+ C+ + L G +HGH+ + + ++ VQ L++ Y G
Sbjct: 1 MVQAQVSPTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGK 60
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
+ E VF+++ ++D+ W +MIS + G +A F+EM
Sbjct: 61 IVEARRVFDEMSERDVFAWTTMISVHARTGDMSSARQLFDEM 102
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 186/578 (32%), Positives = 295/578 (51%), Gaps = 81/578 (14%)
Query: 138 VIRACKFMGSFRFR-FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
+I AC R+R + +H H+ F G+V + N LI +Y K G ++D+ ++FD
Sbjct: 70 LITACA-----RYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDG 124
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
+ ++ SW TSL++ +A+ +E
Sbjct: 125 MPARDMCSW-----------------------------------TSLIAGYAQNDMPDEA 149
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
+ L M + + A +L A+ +G+ IH +K
Sbjct: 150 LGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVK---------------- 193
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
Y H DV V +AL+ YA G D A+ VF QLE +G
Sbjct: 194 YDWHDDVYVG---------------SALLDMYARCGRMDMAIAVFDQLESKNG------- 231
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
+SW+A+I FA G GE L +F +MQ A T S + S A AL G+ +H
Sbjct: 232 -VSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHA 290
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
H+++ + V N +L+MY K G + + VF++++KKD++TWNSM++ + GLG
Sbjct: 291 HMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGRE 350
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
A+ FEEM + G + + F+++L+ACSH GLV EG++ FDMM +E+ +EP+++HY +V
Sbjct: 351 AVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVV 409
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
DLLGRAGLL +A + MPM+P A VWG LL SCRMHKN + + A +F L + TG
Sbjct: 410 DLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTG 469
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKN 676
+LL NIYA++G+W+ AA+VR K G+KK SW+E++ +HMF + + +
Sbjct: 470 PPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEE 529
Query: 677 VCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQ 714
+ + EE+++Q+ G VP+ D +L + ++ ++Q
Sbjct: 530 IYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQ 567
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 187/392 (47%), Gaps = 52/392 (13%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ L+ C +++ + +H L + S FL ++ +Y + G + DAR VF+ P
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
S W S++ N + + AL L M + +GFTF +++A S
Sbjct: 127 ARDMCS---WTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASS-- 181
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H ++ + +V++ + L+ MYA+ G+M + +FD++ KN +SWN + +
Sbjct: 182 --GIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIA 239
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
GFA D + L +F M+ G E T++S+ S+ A G LE+
Sbjct: 240 GFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQ--------------- 284
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
GK +H +IK G FV N ++ +Y K G + A+ +F
Sbjct: 285 --------------------GKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVF 324
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+++K++V+WN+++T++A+ GL EAV F ++ K G + N I++ +++ A +
Sbjct: 325 DRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKC-GVHL---NQITFLSILTACSHG 380
Query: 391 G---RGEEALDLFRKMQLAKVVANSVTISGLL 419
G G++ D+ ++ L + + VT+ LL
Sbjct: 381 GLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLL 412
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 5/205 (2%)
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
+ A AS G + LD +LA A L++ CA +L+ R IH H+
Sbjct: 39 VPAAASTGIIRDTLDSVDARELA---ATPRLYHSLITACARYRSLDDARAIHAHLAGSQF 95
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
++ + N L+++Y KCG + + VF+ + +D+ +W S+I+GY N + + AL
Sbjct: 96 AGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPG 155
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M+ FKP+G F ++L A + G +I + V+ + + + ++D+ R G
Sbjct: 156 MLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVK-YDWHDDVYVGSALLDMYARCG 214
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLL 588
+ A + + + N W L+
Sbjct: 215 RMDMAIAVFDQLESK-NGVSWNALI 238
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 296/552 (53%), Gaps = 42/552 (7%)
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
L+ YA+ G + D+ LFD+ + N ++W + SG+A D A LF+RM E
Sbjct: 72 LVAAYARQGMLHDARALFDRPDARRNVVTWTALLSGYARAGRVDEAEALFQRMP----ER 127
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI---AVVLSVCADLAADHMGK 292
N V+W ++L ++ GR+ + LFD M R + G+ I A+V S D A +
Sbjct: 128 NVVSWNTMLEAYTSAGRVRDAWTLFDGMPVR--DAGSWNILLAALVRSGNMDKARKLFDR 185
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+ E V ++ + G V A+ LF + E+N+VSWNA+I+ YA
Sbjct: 186 MP---------ERNVMAWTTMVAGIARSGSVDEARALFDGMPERNVVSWNAMISGYARNH 236
Query: 353 LCDEAVEVFSQLEKLDGGS-----------------------MERPNVISWSAVIGAFAS 389
DEA ++F ++ D S M R NVI+W+ ++ +
Sbjct: 237 RIDEAHDLFMKMPTRDIASWNIMITGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQ 296
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
+ + E AL +F M + + N VT G + C+ A L+ G+++H + + S + +
Sbjct: 297 SMQSETALQIFNGMLVEGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFI 356
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
++ L+N+Y KCG + VF+ ++KD+I+WN MI+ Y +G+G A+ +E+M E G+
Sbjct: 357 ESTLMNLYAKCGEIRLARKVFDLSKEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEKGY 416
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
KP+ V +V +LSACSH+GLV+EG RIF+ MV++ I + EHY C++DL RAG L +A
Sbjct: 417 KPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAK 476
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASG 629
++ + +EP++ VW LL C H N + + A + G+Y LL NIYA++G
Sbjct: 477 RLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAG 536
Query: 630 RWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
+W++AAK+R +GLKK G SWIEV+ K+H+F S + S+ + +L+++ M
Sbjct: 537 KWKEAAKIRSEMNDRGLKKQPGCSWIEVENKVHVFVSRDKSHSESDLINSLLQDIHDIMR 596
Query: 690 NKGCVPDNDIIL 701
VP +D+ L
Sbjct: 597 MACTVPRDDMQL 608
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/489 (22%), Positives = 227/489 (46%), Gaps = 66/489 (13%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS YAR GR+ +A +F+ P + + + WN++L S G +A L+ M
Sbjct: 104 LLSGYARAGRVDEAEALFQRMP---ERNVVSWNTMLEAYTSAGRVRDAWTLFDGM----P 156
Query: 129 LGDGFTFPLVIRACKFMGSF-RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
+ D ++ +++ A G+ + R F ++ +V+ ++ A+ G +
Sbjct: 157 VRDAGSWNILLAALVRSGNMDKARKLFDRMPERNVMAW---------TTMVAGIARSGSV 207
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM------------------- 228
++ LFD + +N +SWN M SG+A N D A +LF +M
Sbjct: 208 DEARALFDGMPERNVVSWNAMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDR 267
Query: 229 ELEGLEP--------NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
+LE + N +TWT++++ + + + E + +F+ M GI +
Sbjct: 268 DLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVD 327
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
C++LA G+ +H + K F+ F+++ L+ +Y K G++++A+ +F +EK+++S
Sbjct: 328 ACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKDVIS 387
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
WN +I +YA G+ EA+ ++ ++++ +PN +++ ++ A + +G +E L +F
Sbjct: 388 WNGMIAAYAHHGVGVEAIHLYEKMQE----KGYKPNDVTYVGLLSACSHSGLVDEGLRIF 443
Query: 401 RKMQLAKVVA-NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
M + +A + L+ +C+ + L + + H ++V + V N LL
Sbjct: 444 EYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLI-HFLKVEPSST--VWNALLG---- 496
Query: 460 CGCLEEGHLVFEQIEKKDLI--------TWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
GC G+ + ++L+ T+ + + Y G + A EM + G K
Sbjct: 497 -GCNSHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKK 555
Query: 512 D-GVAFVAV 519
G +++ V
Sbjct: 556 QPGCSWIEV 564
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 165/333 (49%), Gaps = 28/333 (8%)
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
A+++F+ P + + + W +++ + + E AL+++ M G+ + TF + A
Sbjct: 272 AQDLFDKMP---RRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVDA 328
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C + S GQ VH + + FQ + I + L+ +YAK G++ + K+FD + K+
Sbjct: 329 CSNLAGL----SEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEKD 384
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
ISWN M + +A + A+ L+++M+ +G +PN VT+ LLS+ + G ++E + +F+
Sbjct: 385 VISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFE 444
Query: 262 -MMRKRGIEVGAEAIAVVLSVCADLAADHMG---KVIHGFVIKGGFEDYVFVKNALICVY 317
M++ R I V E ++ +C+ A +G ++IH + E V NAL+
Sbjct: 445 YMVKDRSIAVRDEHYTCLIDLCS--RAGRLGDAKRLIHFLKV----EPSSTVWNALLGGC 498
Query: 318 GKHGDVKV----AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
HG+ + A+NL E E N ++ L YA AG EA ++ S++ D G +
Sbjct: 499 NSHGNESIGDLAARNLL-EAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMN--DRGLKK 555
Query: 374 RPNVISWSAV---IGAFASNGRGEEALDLFRKM 403
+P SW V + F S + DL +
Sbjct: 556 QPGC-SWIEVENKVHVFVSRDKSHSESDLINSL 587
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 135/285 (47%), Gaps = 27/285 (9%)
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
+V N + G V A+ LF ++++VSW AL+ +YA G+ +A +F + +
Sbjct: 34 HVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAAYARQGMLHDARALFDRPD 93
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
R NV++W+A++ +A GR +EA LF++M VV+ + + S
Sbjct: 94 A-------RRNVVTWTALLSGYARAGRVDEAEALFQRMPERNVVSWNTMLEAYTSAGRVR 146
Query: 426 AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMI 485
A + G VR + + NI LL ++ G +++ +F+++ +++++ W +M+
Sbjct: 147 DAWTL---FDGMPVRDAGSWNI-----LLAALVRSGNMDKARKLFDRMPERNVMAWTTMV 198
Query: 486 SGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF-DMMVREFR 544
+G +G + A A F+ M E V++ A++S + ++E +F M R+
Sbjct: 199 AGIARSGSVDEARALFDGMPERNV----VSWNAMISGYARNHRIDEAHDLFMKMPTRD-- 252
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ + M+ + L+ A D+ MP N W T++N
Sbjct: 253 ----IASWNIMITGFIQDRDLERAQDLFDKMPRR-NVITWTTMMN 292
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 108/227 (47%), Gaps = 16/227 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+QVH + T F+ + ++++YA+ G + AR VF+ + + + WN ++
Sbjct: 339 QQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSK---EKDVISWNGMIAAY 395
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+G+ A+ LY KM++ G + T+ ++ AC G G + ++++
Sbjct: 396 AHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSG----LVDEGLRIFEYMVK--- 448
Query: 168 QGNVHIVNE----LIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGAL 222
++ + +E LI + ++ G++ D+ +L ++V+ + WN + G + + +
Sbjct: 449 DRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGN-ESIG 507
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+L R LE N T+T L + +A G+ +E + M RG++
Sbjct: 508 DLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLK 554
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/562 (33%), Positives = 296/562 (52%), Gaps = 83/562 (14%)
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
P V++AC + G+ +H VL++GF+ +V + L+ MY++ G + D+ KLFD
Sbjct: 1 PPVVKACGDLLD-------GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFD 53
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
+ ++ SWN M +S + + G E
Sbjct: 54 DMPARDRGSWNAM-----------------------------------ISGYCQNGNAAE 78
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
+D+ D MR G+++ A +A VL VCA + GK+IH +VIK G E +FV NALI
Sbjct: 79 ALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALI- 137
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
YA+ G A +VF L K
Sbjct: 138 ------------------------------NMYAKFGSLGHAQKVFGLLIK--------- 158
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQ-LAKVVANSVTISGLLSVCAESAALNIGREI 434
+V+SW+ +I +A NG EA++++ M+ +++ N T +L + AL G I
Sbjct: 159 DVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRI 218
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
HG V++ + ++ V L++MY KCG L++ +F Q+ +K+ + WN+MIS YG++G G
Sbjct: 219 HGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDG 278
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
E AL F EM KPD + FV++LSACSH+GLV++ + F+MM E+ I+P ++HY C
Sbjct: 279 EKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGC 338
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
MVDL GRAG L+ A + +K MP++P+A WG LLN+CR+H N ++ + + ++F + +E
Sbjct: 339 MVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSEN 398
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
G Y+LLSNIYA G+WE VR A+ +GL+K G S I + K+ +F +GN
Sbjct: 399 VGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKC 458
Query: 675 KNVCEVLEELALQMENKGCVPD 696
+ + L +L +++ G VPD
Sbjct: 459 EEIYRELRDLTSKIKTIGYVPD 480
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 182/369 (49%), Gaps = 48/369 (13%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
+++ C + K++H ++ G F+AA ++ +Y+RFG + DAR +F+ P + S
Sbjct: 3 VVKACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGS 62
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
WN+++ NG AL + +MR GV D T V+ C +G G+
Sbjct: 63 ---WNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDIL----SGK 115
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
++H +V++ G + + + N LI MYAK G + + K+F + +K+ +SWN + +G+A N
Sbjct: 116 LIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNG 174
Query: 217 DCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
A+E++ M E E + PN TW S+L +++ G L++ M
Sbjct: 175 LASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMR----------------- 217
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
IHG VIK VFV LI +YGK G + A +LF ++
Sbjct: 218 ------------------IHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPR 259
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
KN V WNA+I+ Y G ++A+E+F +++ +P+ I++ +++ A + +G +
Sbjct: 260 KNSVPWNAMISCYGVHGDGEKALELFREMK----AERVKPDHITFVSLLSACSHSGLVSD 315
Query: 396 ALDLFRKMQ 404
A F M+
Sbjct: 316 AQWCFNMME 324
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 168/343 (48%), Gaps = 23/343 (6%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K +H +I G F++ ++++YA+FG L A+ VF D S WN+++
Sbjct: 115 KLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIKDVVS----WNTLITGY 170
Query: 108 VSNGLYENALKLYVKMRKLG-VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
NGL A+++Y+ M + ++ + T+ ++ A +G+ + G +H V++
Sbjct: 171 AQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQ----GMRIHGQVIKNC 226
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+V + LI MY K G++ D+ LF +V KN + WN M S + ++ D + ALELF+
Sbjct: 227 LYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFR 286
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCADL 285
M+ E ++P+ +T+ SLLS+ + G + + F+MM + GI+ + ++ +
Sbjct: 287 EMKAERVKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRA 346
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV----AQNLFSEIEEKNIVSW 341
M F+ K + AL+ HG++++ ++ LF E++ +N+ +
Sbjct: 347 GELEMA---FNFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLF-EVDSENVGYY 402
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
L YA G E V+ L + D G + P WS++I
Sbjct: 403 VLLSNIYANVGKW-EGVDDVRSLAR-DRGLRKNP---GWSSII 440
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 188/666 (28%), Positives = 335/666 (50%), Gaps = 82/666 (12%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
+ +T + + Q+H +I G + + ++ Y + L+ A +F+ ++
Sbjct: 152 ELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHM---LNKDTVT 208
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
+NS++ + GL E A++L++++ G+ FTF ++ A + +F GQ VH
Sbjct: 209 FNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF----GQQVH 264
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
VL+ F NV + N L+ Y+K Q+ + KLF
Sbjct: 265 GFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLF------------------------- 299
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
++ EL+G+ N V ++S+A G+ +E+ DLF ++ + A +L
Sbjct: 300 -----YEMPELDGISYNVV-----ITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLL 349
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
S+ MG+ IH I G V+NAL+ +Y K K AQ +F I K+
Sbjct: 350 SIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKS-- 407
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
+ W+A+I A+ G+ EE +++
Sbjct: 408 -------------------------------------TVPWTAMISAYVQKGKHEEGINV 430
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
F M+ V A+ T + +L CA A++++GR++H ++R N+ + LL+ Y K
Sbjct: 431 FSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAK 490
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
CGC+ + F ++ +++ ++WN++IS Y NG + L +F++MI++G+KPD V+F++V
Sbjct: 491 CGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSV 550
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
LSACSH G V E F+ M + + + P+ EHY MVD+L R G EA ++ MP EP
Sbjct: 551 LSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEP 610
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT-ETTGSYMLLSNIYAASGRWEDAAKVR 638
+ +W ++LNSCR+HKN ++A+ A ++F + Y+ +SNIYA +G+W++ AKV+
Sbjct: 611 SEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVK 670
Query: 639 ISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
+ + +G++KV SW+E+K + H+FS+ + ++K + + L+ +ME KG PD
Sbjct: 671 KAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTT 730
Query: 699 IILWEM 704
L ++
Sbjct: 731 CALHDV 736
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 138/530 (26%), Positives = 239/530 (45%), Gaps = 83/530 (15%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S + +FG+L AR +F+ + +++ W ++ + + + A +LY MR+ G+
Sbjct: 80 MISGHLKFGKLSKARELFDGM---VERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGI 136
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D T ++ G + QI H HV+++G++ N+ + N L+ Y K +
Sbjct: 137 EPDYVTLVTLLSG---FGELETKNVIVQI-HTHVIKLGYEYNLMVCNSLVDAYCKTHCL- 191
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
Y+ A +LFK M L + VT+ SL++ ++
Sbjct: 192 -------------YL-----------------ASQLFKHM----LNKDTVTFNSLMTGYS 217
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
G EE ++LF + GI+ A +LS L G+ +HGFV+K F VF
Sbjct: 218 NEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVF 277
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V NAL+ Y KH V DE ++F ++ +LD
Sbjct: 278 VGNALLDYYSKHDQV-------------------------------DEVGKLFYEMPELD 306
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
G IS++ VI ++A NG+ +E+ DLFRK+Q + + LLS+ S L
Sbjct: 307 G--------ISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNL 358
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+GR+IH + V N V+N L++MY KC +E +F+ I K + W +MIS Y
Sbjct: 359 RMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAY 418
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
G E + F +M G D F ++L AC++ ++ GR++ +++R +
Sbjct: 419 VQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMS-N 477
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
+ + ++D + G + +A MP E N+ W L+++ + N D
Sbjct: 478 VYSGSALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWNALISAYAQNGNVD 526
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 121/230 (52%), Gaps = 8/230 (3%)
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+I ++K GF N + + + GD+ A +F ++ KN +S N +I+ + + G
Sbjct: 29 LIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFG 88
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+A E+F G +ER +SW+ +IG + + + +EA L+ M+ + +
Sbjct: 89 KLSKARELFD-------GMVER-TAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDY 140
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
VT+ LLS E N+ +IH HV+++ N++V N L++ Y K CL +F+
Sbjct: 141 VTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKH 200
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
+ KD +T+NS+++GY GL E A+ F E+ +G KP F A+LSA
Sbjct: 201 MLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 21/233 (9%)
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A +LN I H+V+ N N N +N +++ G L H VF+Q+ K+ I+ N
Sbjct: 19 APKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLN 78
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
MISG+ G A F+ M+E V++ ++ + E R++ M R
Sbjct: 79 MMISGHLKFGKLSKARELFDGMVERT----AVSWTILIGGYLQSNQSKEAFRLYADM-RR 133
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVK------NMPMEPNAYVWGTLLNS-CRMHK 595
IEP Y +V LL G L+ + IV+ + E N V +L+++ C+ H
Sbjct: 134 GGIEPD---YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTH- 189
Query: 596 NTDVAEAMASQIFG-LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
+ASQ+F ++ + T ++ L Y+ G E+A ++ + G+K
Sbjct: 190 ----CLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIK 238
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 183/537 (34%), Positives = 295/537 (54%), Gaps = 43/537 (8%)
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
Y + + ++ KLFDK+ N ISWN + SG+ N A ++F +M E N V+W
Sbjct: 4 YFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMP----ERNVVSW 59
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
T+++ + + G +EE LF M +R + ++ + D D ++ +K
Sbjct: 60 TAMIRGYVQEGLIEEAELLFWRMPERNV---VSWTVMLGGLIEDGRVDEARQLFDMMPVK 116
Query: 301 GGFEDYVFVKNAL--ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
D V N + +C G+ + A+ +F E+ ++N+V+W ++I+
Sbjct: 117 ----DVVASTNMIDGLCSEGR---LIEAREIFDEMPQRNVVAWTSMISG----------- 158
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
EK DG +WS +I + G EAL LF MQ V + ++ +
Sbjct: 159 ------EKDDG---------TWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISV 203
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
LSVC A+L+ GR++H +VR + +I V + L+ MY+KCG L VF++ KD+
Sbjct: 204 LSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDI 263
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
+ WNS+I+GY +G GE AL F +M + PD + F+ VLSACS+ G V EG IF+
Sbjct: 264 VMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFES 323
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
M +++++P+ EHYACMVDLLGRAG L EA ++++NMP+E +A VWG LL +CR HKN D
Sbjct: 324 MKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLD 383
Query: 599 VAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
+AE A ++ L G Y+LLSN+Y++ RW+D ++R + + K L+K G SWIEV
Sbjct: 384 LAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIEVD 443
Query: 659 RKIHMFSSGNSL-QSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQ 714
+K+H+FS G S + + + + L +L + G PD ++ ++ ++ V ++
Sbjct: 444 KKVHIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSLR 500
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 165/342 (48%), Gaps = 30/342 (8%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y + R +AR +F+ P +++++ WN ++ V NG+ A K++ KM + V+
Sbjct: 4 YFQNKRPREARKLFDKMP---ETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVS-- 58
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF-QGNVHIVNELIGMYAKMGQMSDSF 191
+ R G I +L + NV ++G + G++ ++
Sbjct: 59 -----------WTAMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEAR 107
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL---------EPNFVTWTS 242
+LFD + VK+ ++ M G A E+F M + E + TW++
Sbjct: 108 QLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWST 167
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
++ + R G E + LF +M++ G+ ++ VLSVC LA+ G+ +H +++
Sbjct: 168 MIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQ 227
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
F+ ++V + LI +Y K GD+ A+ +F K+IV WN++I YA+ G ++A+EVF
Sbjct: 228 FDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFH 287
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+ S P+ I++ V+ A + G+ +E L++F M+
Sbjct: 288 DM----FSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMK 325
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 77 GRLFDARNVFETAP----------FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL 126
GRL +AR +F+ P + W++++++ G AL L+ M++
Sbjct: 132 GRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQRE 191
Query: 127 GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ 186
GV +FP VI GS G+ VH+ +++ F ++++ + LI MY K G
Sbjct: 192 GVRP---SFPSVISVLSVCGSLA-SLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGD 247
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
+ + ++FD+ K+ + WN + +G+A + + ALE+F M + P+ +T+ +LS+
Sbjct: 248 LVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSA 307
Query: 247 HARCGRLEETMDLFDMMRKR 266
+ G+++E +++F+ M+ +
Sbjct: 308 CSYTGKVKEGLEIFESMKSK 327
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 116/240 (48%), Gaps = 19/240 (7%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C ++ L +QVH+QL+ + + ++++ ++++Y + G L A+ VF+ F
Sbjct: 203 VLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDR--FSS 260
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K ++WNSI+ +G E AL+++ M + D TF V+ AC + G +
Sbjct: 261 K-DIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGL- 318
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGF 212
+I + + ++ + + G+++++ L + + V+ + I W +
Sbjct: 319 --EIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGAC 376
Query: 213 ALNFDCDGALELFKRMELEGLEPN----FVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+ + D A E+ + L+ LEPN ++ ++L SS + R ++ ++L MR + +
Sbjct: 377 RTHKNLDLA-EIAAKKLLQ-LEPNNAGPYILLSNLYSSQS---RWKDVVELRKTMRAKNL 431
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/525 (34%), Positives = 274/525 (52%), Gaps = 62/525 (11%)
Query: 200 KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDL 259
K++ S + + ++L CD A +F P+ + W S++ ++ R + E +++
Sbjct: 81 KHHHSITHLINLYSLFHKCDLARSVFDSTP----NPSRILWNSMIRAYTRSKQYNEALEM 136
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
+ M V KGG E VF+ L+ +Y K
Sbjct: 137 YYCM----------------------------------VEKGGLERDVFIGAGLVDMYSK 162
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS-------- 371
GD+K A+ +F ++ ++++V+WNA+I +++ A VF Q+ D S
Sbjct: 163 MGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDDVSWGTMMAGY 222
Query: 372 ---------------MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
M+ NV +W+ +I A+ NG +EA+ F +M+L NSVT
Sbjct: 223 AHNGCFVEVLELFDKMKLGNV-TWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFV 281
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
+L A AA G H ++++ N LV N L++MY KCG L+ +F +++ K
Sbjct: 282 SVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHK 341
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D ++WN+M+SGY ++G G+ A+A F M E+ + D V+FV+VLSAC HAGLV EGR+IF
Sbjct: 342 DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIF 401
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
M ++ I+P +EHYACMVDLLGRAGL E +K MP+EP+A VWG LL SCRMH N
Sbjct: 402 HSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSN 461
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
+ E + L +++LS+IYA SGRW DA K R GLKK G SW+E
Sbjct: 462 VKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVE 521
Query: 657 VKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+K K+H F G+ L+++ + L +ME G VPD +L
Sbjct: 522 LKNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVL 566
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 188/384 (48%), Gaps = 32/384 (8%)
Query: 25 TYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
TY N L + LL CK ++ L Q+H Q+IV+G + ++++Y+ F + AR+
Sbjct: 48 TYTNYLH--YPRLLSSCKHLNPLLQIHAQIIVSGFKHHHSIT-HLINLYSLFHKCDLARS 104
Query: 85 VFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACK 143
VF++ P S +LWNS++R + Y AL++Y M K G+ D F ++
Sbjct: 105 VFDSTP---NPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGGLERDVFIGAGLVDMYS 161
Query: 144 FMGSF-RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF---KLFDKVRV 199
MG R R F ++ V+ M A + Q D + ++FD++
Sbjct: 162 KMGDLKRAREVFDKMPKRDVVAWN------------AMIAGLSQSEDPYVARRVFDQMVD 209
Query: 200 KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDL 259
++ +SW M +G+A N LELF +M+L VTW +++++ + G +E +
Sbjct: 210 QDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGN-----VTWNVIIAAYMQNGHAKEAISS 264
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
F MR + VL A LAA G H +I+ GF V N+LI +Y K
Sbjct: 265 FHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAK 324
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
G + ++ LF+E++ K+ VSWNA+++ YA G D A+ +FS +++ S + + +S
Sbjct: 325 CGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQE----SQVQIDSVS 380
Query: 380 WSAVIGAFASNGRGEEALDLFRKM 403
+ +V+ A G EE +F M
Sbjct: 381 FVSVLSACRHAGLVEEGRKIFHSM 404
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 195/666 (29%), Positives = 335/666 (50%), Gaps = 88/666 (13%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+ VH ++ ++A L ++ +Y + G L+ A +FE P C+ ++ W ++
Sbjct: 221 RSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVP--CRMTAP-WTPMISCY 277
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+G ++ AL ++ KM++ + + T V+ AC +G R G+ VH V++
Sbjct: 278 NQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLG----RVKEGRSVHGFVIRRAM 333
Query: 168 QGNVHIVNE-LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+ + L+ +YA G + D K+F+ ++ K +S
Sbjct: 334 DPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILS---------------------- 371
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
W +L+S R G+ EE + LF M+ +G+ + ++A LS C ++
Sbjct: 372 -------------WNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTIS 418
Query: 287 ADHMGKVIHGFVIK-GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+G IHG++IK G F D+V NALI
Sbjct: 419 FSQLGAQIHGYIIKTGNFNDFV---------------------------------QNALI 445
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
YA+ G A ++F ++++ ++++W+++I F+ NG EA+ LF +M +
Sbjct: 446 DMYAKCGFVHSANKMFEKIKE--------KSLVTWNSMICGFSQNGYSVEAITLFDQMYM 497
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
V + +T ++ C+ L G+ +H ++ + K+ + L +MY KCG L+
Sbjct: 498 NCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQM 557
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
H VF+++ ++ +++W+ MI+GYGM+G ++ F +M+ +G KP+ + F+ +LSACSH
Sbjct: 558 AHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSH 617
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
AG V EG+ F+ M EF +EP+ +H+ACMVDLL RAG L A I+ ++P N+ +WG
Sbjct: 618 AGAVEEGKLYFNSM-SEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWG 676
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
LLN CR+HK D+ +++ + + T TG Y LLSNIYA G W+ KVR K+KG
Sbjct: 677 ALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKG 736
Query: 646 LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA--LQMENKGCVPDNDIILWE 703
L+KV G S IE+ +KI+ F G++ S K++ LE + + PDN I+
Sbjct: 737 LRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTS 796
Query: 704 MMGKKN 709
K+N
Sbjct: 797 KFNKEN 802
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 145/574 (25%), Positives = 260/574 (45%), Gaps = 96/574 (16%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
L ++C T L Q+H L +TG + + +++ YA+ G ++ VF+T P K
Sbjct: 7 LFRRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFP---KPD 63
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD-----GFTFPLVIRACKFMGSFRFR 151
S +W +++ V G +E A+ LY +M V D F FP V++AC G
Sbjct: 64 SFMWGVLIKCYVWGGFFEEAVSLYHEM----VYQDQTQISNFVFPSVLKACSGFGDL--- 116
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
S G VH V++ GF+ + + L+ MY +M + D+ K FD + +++ ++W+ +
Sbjct: 117 -SVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLN 175
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
F N L++F +M E +EP+ VT S
Sbjct: 176 FVQNGQASEGLDMFSQMISEAVEPDSVTMLS----------------------------- 206
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
V C++L + +G+ +HG+V++ E + N+LI +YGK GD+ A+ LF
Sbjct: 207 ------VTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFE 260
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+ + W +I+ Y ++G EA+ VF+++++ ME PN
Sbjct: 261 NVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEF---KME-PN--------------- 301
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI-LVQ 450
VT+ G+L CA + GR +HG V+R +M+ + +
Sbjct: 302 --------------------QVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLG 341
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
L+ +Y G L + H VFE I++K +++WN++IS + NG E AL F +M G
Sbjct: 342 PALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLM 401
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
PD + + LSAC G +I +++ +++ ++D+ + G + A+
Sbjct: 402 PDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQN--ALIDMYAKCGFVHSANK 459
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
+ + + E + W +++ C +N EA+
Sbjct: 460 MFEKIK-EKSLVTWNSMI--CGFSQNGYSVEAIT 490
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 177/465 (38%), Positives = 269/465 (57%), Gaps = 44/465 (9%)
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
W ++ ++R G +E + L+ M + ++G A ++ L C+DL G+ +H V+
Sbjct: 146 WVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVL 205
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
K E+ + V NAL+ Y+E G DEA+
Sbjct: 206 KA-------------------------------TEDPDQVVNNALLRLYSEDGCFDEALR 234
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
VF DG M NV+SW+++I EA++ FR MQ + + VT++ +L
Sbjct: 235 VF------DG--MPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTIL 286
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
VCA AL G+EIH +V+ + + V N L++MY KCG ++ VF ++ KDL
Sbjct: 287 PVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLT 346
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN++I+GY +NG A+ +F+EMI +GF PDG+ F+A+LS CSHAGL ++G R+F+MM
Sbjct: 347 SWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMM 406
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
++ I P +EHYAC+VD+LGRAG ++EA +IVKNMP +P +WG+LLNSCR+H N +
Sbjct: 407 KMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPL 466
Query: 600 AEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKR 659
AEA+A ++F L G+Y++LSNIYA +G WE VR + +G+ K AG SW+++K
Sbjct: 467 AEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKS 526
Query: 660 KIHMFSSGNSLQSDLKNVCE---VLEELALQMENKGCVPDNDIIL 701
KIH F +G S ++ +N E V + L ME G VPD ++L
Sbjct: 527 KIHTFVAGGS--NEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVL 569
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 167/350 (47%), Gaps = 45/350 (12%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L +++++++ R+ +AR VFE D +W ++ NG + AL LY +M
Sbjct: 111 LKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMV 170
Query: 125 -KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
+ G LG+ F F + ++AC +G + G+ VH VL+ + + N L+ +Y++
Sbjct: 171 CQFGQLGN-FAFSMALKACSDLGDLQ----TGRAVHAQVLKATEDPDQVVNNALLRLYSE 225
Query: 184 MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
G ++ ++FD + +N +SWN + +G A+E F+ M+ +G+ ++VT T+
Sbjct: 226 DGCFDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTT- 284
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
+L VCA + A GK IH ++K
Sbjct: 285 ----------------------------------ILPVCARVTALGSGKEIHAVIVKSTA 310
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
+ V N+L+ +Y K G + + +F+ ++ K++ SWN LIT YA G EA+E F +
Sbjct: 311 KPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQE 370
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
+ G S P+ I++ A++ + G ++ LF M++ ++ +V
Sbjct: 371 M-ICSGFS---PDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTV 416
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 175/375 (46%), Gaps = 31/375 (8%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L+ C + L + VH Q++ + + +L +Y+ G +A VF+ P
Sbjct: 181 FSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFDEALRVFDGMP 240
Query: 91 FDCKSSSLLWNSILRVNVS-NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
+ + WNS++ V +G++E A++ + M+ G+ T ++ C + +
Sbjct: 241 ---HRNVVSWNSLIAGLVKKDGVFE-AIEAFRIMQGKGMGFSWVTLTTILPVCARVTAL- 295
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+ +H +++ + + ++N L+ MYAK G M ++F+ ++ K+ SWN +
Sbjct: 296 ---GSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLI 352
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGI 268
+G+A+N A+E F+ M G P+ +T+ +LLS + G ++ LF+MM+ GI
Sbjct: 353 TGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGI 412
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGF-VIKG-GFEDYVFVKNALICVYGKHGDVK-- 324
E A ++ V G++ ++K F+ + +L+ HG+V
Sbjct: 413 SPTVEHYACLVDVLG-----RAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLA 467
Query: 325 --VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
VA+ LF E+E N ++ L YA AG+ E+V+V + + G M + SW
Sbjct: 468 EAVAKRLF-ELEPNNAGNYVMLSNIYANAGMW-ESVKVVREFMEKRG--MTKEAGCSWLQ 523
Query: 383 V---IGAFASNGRGE 394
+ I F + G E
Sbjct: 524 IKSKIHTFVAGGSNE 538
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 13/264 (4%)
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGG-SMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
LIT ++ DEA VF DGG ++ P + W A+ ++ NG +EAL L+ +
Sbjct: 115 LITLFSVCRRVDEARRVFE-----DGGEDVDLPESV-WVAMGIGYSRNGYPKEALLLYYE 168
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
M + S L C++ L GR +H V++ + + + +V N LL +Y + GC
Sbjct: 169 MVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGC 228
Query: 463 LEEGHLVFEQIEKKDLITWNSMISG-YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
+E VF+ + +++++WNS+I+G +G+ E A+ F M G V +L
Sbjct: 229 FDEALRVFDGMPHRNVVSWNSLIAGLVKKDGVFE-AIEAFRIMQGKGMGFSWVTLTTILP 287
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
C+ + G+ I ++V+ +P +VD+ + G + + M + +
Sbjct: 288 VCARVTALGSGKEIHAVIVKS-TAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGK-DL 345
Query: 582 YVWGTLLNSCRMHKNTDVAEAMAS 605
W TL+ + N + EAM S
Sbjct: 346 TSWNTLITGYAI--NGRMTEAMES 367
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/431 (39%), Positives = 256/431 (59%), Gaps = 12/431 (2%)
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ VL CADL+ MG+ +HG ++ G E +V +LI +Y K G + A+ LF ++
Sbjct: 110 LPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMI 169
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
+++ SWNALI Y + G A ++F + ME N++SW+A+I + NG E
Sbjct: 170 VRDMASWNALIAGYMKEGEIGVAEDLFER--------MEHRNIVSWTAMISGYTQNGFAE 221
Query: 395 EALDLFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
+AL LF +M +++ N VTI +L CA+SAAL GR IH + ++ N VQ
Sbjct: 222 QALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTA 281
Query: 453 LLNMYMKCGCLEEGHLVFEQIEK--KDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
L MY KC L E F+ I + K+LI WN+MI+ Y +G G A++ FE M+ AG +
Sbjct: 282 LAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQ 341
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
PD V F+ +LS CSH+GL++ G F+ M +EP++EHYAC+VDLLGRAG L EA +
Sbjct: 342 PDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKE 401
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
++ MPM+ VWG LL +CR H+N ++AE A ++F L + +G+Y+LLSN+YA +G
Sbjct: 402 LISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGM 461
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
WE+ K+R K +G+KK G SWIE+ K H+F + K + + LE L +++
Sbjct: 462 WEEVKKLRALLKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKM 521
Query: 691 KGCVPDNDIIL 701
G +PD +L
Sbjct: 522 AGYIPDTSFVL 532
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 156/291 (53%), Gaps = 16/291 (5%)
Query: 117 LKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNE 176
L+ Y +M LG+LGD FT P V+++C + R G+ VH L++G +G+ ++
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLS----RVCMGRCVHGQGLRVGLEGDFYVGAS 147
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN 236
LI MY K G + D+ KLFDK+ V++ SWN + +G+ + A +LF+RME N
Sbjct: 148 LIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERME----HRN 203
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV--VLSVCADLAADHMGKVI 294
V+WT+++S + + G E+ + LFD M + G E+ + + VL CA AA G+ I
Sbjct: 204 IVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRI 263
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE--KNIVSWNALITSYAEAG 352
H F G V+ AL +Y K + A+ F I + KN+++WN +IT+YA G
Sbjct: 264 HDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHG 323
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
EAV +F + L G +P+ +++ ++ + +G + L+ F M
Sbjct: 324 CGVEAVSIFENM--LRAGV--QPDAVTFMGLLSGCSHSGLIDAGLNHFNDM 370
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 33/174 (18%)
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
L+ + +M ++ ++ T+ +L CA+ + + +GR +HG +RV + + V L++M
Sbjct: 92 LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151
Query: 457 YMKCGC--------------------------LEEGHL-----VFEQIEKKDLITWNSMI 485
Y+KCG ++EG + +FE++E +++++W +MI
Sbjct: 152 YVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMI 211
Query: 486 SGYGMNGLGENALATFEEMIEAG--FKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
SGY NG E AL F+EM++ G KP+ V V+VL AC+ + + GRRI D
Sbjct: 212 SGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHD 265
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 167/391 (42%), Gaps = 55/391 (14%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPF-D 92
+L+ C + ++ + VH Q + G ++ A ++ +Y + G + DAR +F+ D
Sbjct: 113 VLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRD 172
Query: 93 CKSSSLL---------------------------WNSILRVNVSNGLYENALKLYVKMRK 125
S + L W +++ NG E AL L+ +M +
Sbjct: 173 MASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQ 232
Query: 126 LG--VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
G + + T V+ AC + G+ +H+ +G N + L GMYAK
Sbjct: 233 DGSEMKPNWVTIVSVLPACAQSAALE----RGRRIHDFANGIGLHLNSSVQTALAGMYAK 288
Query: 184 MGQMSDSFKLFDKVRV--KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
+ ++ FD + KN I+WN M + +A + A+ +F+ M G++P+ VT+
Sbjct: 289 CYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFM 348
Query: 242 SLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG--FV 298
LLS + G ++ ++ F DM +E E A V+ + G+++ +
Sbjct: 349 GLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLG-----RAGRLVEAKELI 403
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQ----NLFSEIEEKNIVSWNALITSYAEAGLC 354
+ + V AL+ H ++++A+ LF +E N ++ L YAEAG+
Sbjct: 404 SQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFV-LEPDNSGNYVLLSNLYAEAGMW 462
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
+E V+ L K G M++ SW + G
Sbjct: 463 EE-VKKLRALLKYQG--MKKSPGCSWIEING 490
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 209/685 (30%), Positives = 343/685 (50%), Gaps = 84/685 (12%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S YA+ GR+ +AR +F+ P + + + WNS++ + N L E+A +L+ +M K
Sbjct: 52 MISAYAKNGRIANARELFDLMP---QRNLVSWNSMIAGYLHNELVEDAARLFDRMFK--- 105
Query: 129 LGDGFTFPLVIRACKFMGS-------FRFRFSFGQIVHNHVLQMGFQ------------- 168
D +++ L+I +G F V + L G+
Sbjct: 106 -RDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFD 164
Query: 169 ----GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
NV N ++ Y K G+M + F+ + +N +SWN+M G+ D D A
Sbjct: 165 EMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMF 224
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI-----EVGAEAIAVVL 279
FK++ PN V+W ++LS A GR+ E +LF+ M + + +GA +
Sbjct: 225 FKKIP----TPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQI 280
Query: 280 SVCADLAADHMGK-------VIHGFVIKGGF-----------EDYVFVKNALICVYGKHG 321
L + K +I+G+V G + + A+I Y + G
Sbjct: 281 DDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSG 340
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD------------- 368
+ A +FS+I ++ V WN++IT YA G DEA+ +F ++ D
Sbjct: 341 RMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQ 400
Query: 369 GGSMERP----------NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
G M++ NV+SW+++I + NG EAL+ F M+ + TI
Sbjct: 401 AGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCC 460
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
L A AALN+G ++H ++ ++ V+N +L MY K G + E VF +I+ KD+
Sbjct: 461 LRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDV 520
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
++WNS+I+GY +NG G+ A+ FE M G PD V F +LSAC+H G V++G +F
Sbjct: 521 VSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKS 580
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
M + I+PQ EHYAC+++LLGR G L+EA +IV+ M +A +WG LL +CR+H N +
Sbjct: 581 MTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLE 640
Query: 599 VAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
+A+ A ++ L + +Y+LLSN++A +GRW+ +VR+ K +K G SWIE+
Sbjct: 641 LAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIEID 700
Query: 659 RKIHMFSSGNSLQSDLK-NVCEVLE 682
++H F S DL+ +C +L+
Sbjct: 701 NQLHCFLS--KAPPDLRPEICNILK 723
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 144/565 (25%), Positives = 257/565 (45%), Gaps = 80/565 (14%)
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
LQM + N+ N +I YAK G+++++ +LFD + +N +SWN M +G+ N + A
Sbjct: 39 LQMT-ERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAA 97
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC 282
LF RM + + +WT +++ + R G LE+ +LF+++ + V A+ +
Sbjct: 98 RLFDRM----FKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNAL--IAGYA 151
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
K+ ++K V N+++ Y K+G +++ F + E+N+VSWN
Sbjct: 152 KKRLFREAKKLFDEMLVKN-----VVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWN 206
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
++ Y G D A F ++ PNV+SW ++ FA GR EA +LF +
Sbjct: 207 LMVDGYVGVGDLDSAWMFFKKIPT--------PNVVSWVTMLSGFAHYGRMTEARNLFNE 258
Query: 403 MQLAKVVANSVTISG------------LLSVCAESAALNIGREIHGHV-------VRVSM 443
M +V+ + I L E +++ I+G+V R +
Sbjct: 259 MPTKNLVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREIL 318
Query: 444 N----KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
N KNI Q ++N Y++ G ++E + +F QI +D + WNSMI+GY G + AL
Sbjct: 319 NLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALR 378
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
F+EM+ D V++ +++A + AG +++ +F+ M E + + ++
Sbjct: 379 LFQEMV----CKDMVSWNTMIAAYAQAGQMDKALEMFNEMQ-----ERNVVSWNSLITGY 429
Query: 560 GRAGLLQEASD---IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETT- 615
+ GL EA + ++K +P+ T + C A + Q+ L +T
Sbjct: 430 VQNGLYFEALNCFILMKQQGEKPDQ----TTIVCCLRASANLAALNVGVQLHHLTIKTGF 485
Query: 616 GSYMLLSN----IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
G+ + + N +YA SGR +A V K K + SW + +G +L
Sbjct: 486 GNDLFVKNAILTMYAKSGRVPEAENVFAEIKNKDVV-----SW-------NSLIAGYALN 533
Query: 672 SDLKNVCEVLEELALQMENKGCVPD 696
K E+ E + L +G +PD
Sbjct: 534 GCGKEAVELFEVMPL----RGIIPD 554
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 164/360 (45%), Gaps = 53/360 (14%)
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
YVF +N I G+ G ++ A +F ++ E+NIV++N++I++YA+ G A E+F
Sbjct: 14 YVFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDL-- 71
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
M + N++SW+++I + N E+A LF +M + + ++ I+ +
Sbjct: 72 ------MPQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRI---- 121
Query: 426 AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMI 485
L RE+ + ++ + +N L+ Y K E +F+++ K++++WNS++
Sbjct: 122 GELEKARELFN---LLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSIL 178
Query: 486 SGYGMNGLGENALATFEEMIEAG-----------------------FK----PDGVAFVA 518
SGY NG + L FE M E FK P+ V++V
Sbjct: 179 SGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNVVSWVT 238
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
+LS +H G + E R +F+ M + + + M+ R + +A + MP E
Sbjct: 239 MLSGFAHYGRMTEARNLFNEMPTK-----NLVSWNAMIGAYVRENQIDDAYKLFMEMP-E 292
Query: 579 PNAYVWGTLLNS-CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
++ W ++N R+ K E + + I T + N Y SGR ++A ++
Sbjct: 293 KDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTA----MINGYLQSGRMDEANEI 348
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 102/210 (48%), Gaps = 14/210 (6%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL-WNSILRVN 107
Q+H+ I TG F+ +L++YA+ GR+ +A NVF + K+ ++ WNS++
Sbjct: 475 QLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFA----EIKNKDVVSWNSLIAGY 530
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS-FGQIVHNHVLQMG 166
NG + A++L+ M G++ D TF ++ AC G + F + + ++
Sbjct: 531 ALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQ 590
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR-VKNYISWNMMFSGFALNFDCDGALELF 225
+ ++N L+G ++G++ ++ ++ ++ V + W + ++ + + L +
Sbjct: 591 SEHYACVIN-LLG---RVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLE--LAKY 644
Query: 226 KRMELEGLEPNFVTWTSLLSS-HARCGRLE 254
L LEP + LLS+ HA GR +
Sbjct: 645 SAERLLALEPQNASNYVLLSNMHAEAGRWD 674
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 194/694 (27%), Positives = 346/694 (49%), Gaps = 89/694 (12%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAAR--VLSIYARFGRLFD 81
+T+ L C D + Q + QVH + G + + FL +L Y RL
Sbjct: 148 VTFTTLLPGCNDAVPQNA-----VGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
A +FE P + S+ +N+++ +GLY ++ L++KMR+ G FTF V++A
Sbjct: 203 ACVLFEEIP---EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
+ F + GQ +H + GF + + N+++ Y+K ++ ++ LFD
Sbjct: 260 VVGLHDF----ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFD------ 309
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
E E +FV++ ++SS+++ + E ++ F
Sbjct: 310 -----------------------------EMPELDFVSYNVVISSYSQADQYEASLHFFR 340
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
M+ G + A +LS+ A+L++ MG+ +H + + + V N+L+ +Y K
Sbjct: 341 EMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAK-- 398
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
E+F + E L S+ + +SW+
Sbjct: 399 ------------------------------------CEMFEEAE-LIFKSLPQRTTVSWT 421
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
A+I + G L LF KM+ + + A+ T + +L A A+L +G+++H ++R
Sbjct: 422 ALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRS 481
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
+N+ +GL++MY KCG +++ VFE++ ++ ++WN++IS + NG GE A+ F
Sbjct: 482 GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAF 541
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
+MIE+G +PD V+ + VL+ACSH G V +G F M + I P+ +HYACM+DLLGR
Sbjct: 542 AKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGR 601
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT-ETTGSYML 620
G EA ++ MP EP+ +W ++LN+CR+HKN +AE A ++F + +Y+
Sbjct: 602 NGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVS 661
Query: 621 LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEV 680
+SNIYAA+G WE V+ + + +G+KKV SW+EV KIH+FSS + + +
Sbjct: 662 MSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRK 721
Query: 681 LEELALQMENKGCVPDNDIILWEMMGKKNVKRIQ 714
+ EL ++E +G PD ++ ++ + ++ ++
Sbjct: 722 INELTAEIEREGYKPDTSSVVQDVDEQMKIESLK 755
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 221/503 (43%), Gaps = 80/503 (15%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
V +++ GF + N ++ + GQ+S + K++D++ KN +S N M SG D
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGD 94
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI-- 275
A +LF M + VTWT L+ +AR +E LF M + + +
Sbjct: 95 VSSARDLFDAMP----DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF--VKNALICVYGKHGDVKVAQNLFSEI 333
+L C D + +H F +K GF+ F V N L+ Y + + +A LF EI
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA------- 386
EK+ V++N LIT Y + GL E++ +F ++ + S +P+ ++S V+ A
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQ----SGHQPSDFTFSGVLKAVVGLHDF 266
Query: 387 ----------------------------FASNGRGEEALDLFRKMQLAKVVANSVTISG- 417
++ + R E LF +M V+ +V IS
Sbjct: 267 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 326
Query: 418 ------------------------------LLSVCAESAALNIGREIHGHVVRVSMNKNI 447
+LS+ A ++L +GR++H + + + +
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL 386
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
V N L++MY KC EE L+F+ + ++ ++W ++ISGY GL L F +M +
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS 446
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
+ D F VL A + + G+++ ++R +E + + +VD+ + G +++
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKD 505
Query: 568 ASDIVKNMPMEPNAYVWGTLLNS 590
A + + MP + NA W L+++
Sbjct: 506 AVQVFEEMP-DRNAVSWNALISA 527
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 217/784 (27%), Positives = 375/784 (47%), Gaps = 106/784 (13%)
Query: 17 PSRPFSIITYNNSLLDCFDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIY 73
P PFS + F H+ Q+C K + KQ H ++I+T + F+ ++ +Y
Sbjct: 28 PISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMY 87
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY------------- 120
+ L A VF+ P + ++ WN++L G A KL+
Sbjct: 88 IKCSDLGFAFKVFDGMP---QRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVEL 144
Query: 121 --VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
+M ++G + D TF +V+++C + G +H ++MGF +V + L+
Sbjct: 145 FDFRMGRMGTVFDRTTFAVVLKSCSSLED----HGGGIQIHGLAVKMGFDCDVVTGSALL 200
Query: 179 GMYAKMGQMSDSFK----LFDKVRVKNYISWNMMFSGFALNFDCD---GALELFKRMELE 231
MYAK +D + LF +++ + + +F D G L M+
Sbjct: 201 DMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCN 260
Query: 232 GLEP------------NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
L N ++ +++ +AR + E + +F +++K G+ + +++
Sbjct: 261 NLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAX 320
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
CA + D G +HG +K + + V NA++ +YGK G + A +F E+ ++ V
Sbjct: 321 RACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAV 380
Query: 340 SWNALITSYAEAGLCDEAVEVFSQL-------EKLDGGS--------------MERPNVI 378
SWNA+I ++ + G ++ + +F + ++ GS ME N I
Sbjct: 381 SWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRI 440
Query: 379 SWS----------AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG----------- 417
S A+I ++ G E+A L ++ VV+ + ISG
Sbjct: 441 IKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQ 500
Query: 418 --------------------LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
+L CA + +G++IH +++ + + + + L++MY
Sbjct: 501 KTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMY 560
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG +++ L+FE+ +D +TWN+M+ GY +GLGE AL FE M KP+ F+
Sbjct: 561 SKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFL 620
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
AVL AC H GLV +G F M+ + ++PQ+EHY+C+VD++GR+G + +A ++++ MP
Sbjct: 621 AVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPF 680
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
E +A +W TLL+ C++H N +VAE A I L E + +Y+LLSNIYA +G W + K+
Sbjct: 681 EADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKL 740
Query: 638 RISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
R + GLKK G SWIE+K ++H F G+ K + E L+ L +M+ G +PD
Sbjct: 741 RKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDT 800
Query: 698 DIIL 701
D IL
Sbjct: 801 DFIL 804
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 156/628 (24%), Positives = 283/628 (45%), Gaps = 91/628 (14%)
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
TF + + C S R G+ H ++ F+ V + N LI MY K + +FK+
Sbjct: 44 TFSHIFQEC----SDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKV 99
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FD + ++ +SWN M G+A D A +LF M G CG +
Sbjct: 100 FDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTG-----------------CGVV 142
Query: 254 EETMDLFDM-MRKRGIEVGAEAIAVVLSVCADLAADHMGKV-IHGFVIKGGFEDYVFVKN 311
E LFD M + G AVVL C+ L DH G + IHG +K GF+ V +
Sbjct: 143 E----LFDFRMGRMGTVFDRTTFAVVLKSCSSL-EDHGGGIQIHGLAVKMGFDCDVVTGS 197
Query: 312 ALICVYGK----HGDVKVAQNLFSEIEEKNI----VSWNALITSYAEAGLCDEA-VEVFS 362
AL+ +Y K + D++ LF E+++ + + +AL T + + A ++++
Sbjct: 198 ALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYM 257
Query: 363 QLEKLDG------GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
+ L S+ N+ S++A+I +A + +G EAL +FR +Q + + + V++S
Sbjct: 258 KCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLS 317
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
G CA G ++HG ++ NI V N +L+MY KCG L E LVFE++ +
Sbjct: 318 GAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSR 377
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D ++WN++I+ + NG E L+ F M+++G +PD + +VL AC+ +N G I
Sbjct: 378 DAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIH 437
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
+ +++ R+ ++D+ + G++++A + + E W +++ + K
Sbjct: 438 NRIIKS-RMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIISGFSLQKQ 495
Query: 597 TDVAEAMASQIFGL-ITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
++ A+ S++ + + +Y + L A +
Sbjct: 496 SEEAQKTFSKMLEMGVDPDNFTYATI------------------------LDTCANLVTV 531
Query: 656 EVKRKIHMFSSGNSLQS---------DLKNVCEVLEELALQMENKGCVPDNDIILWEMM- 705
E+ ++IH LQS D+ + C +++ L E P+ D + W M
Sbjct: 532 ELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEK---APNRDFVTWNAMV 588
Query: 706 --------GKKNVKRIQRIRADNIKSKH 725
G++ +K + ++ +N+K H
Sbjct: 589 CGYAQHGLGEEALKIFEYMQLENVKPNH 616
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/666 (28%), Positives = 335/666 (50%), Gaps = 82/666 (12%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
+ +T + + Q+H +I G + + ++ Y + L+ A +F+ ++
Sbjct: 152 ELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHM---LNKDTVT 208
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
+NS++ + GL E A++L++++ G+ FTF ++ A + +F GQ VH
Sbjct: 209 FNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF----GQQVH 264
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
VL+ F NV + N L+ Y+K Q+ + KLF ++
Sbjct: 265 GFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMP--------------------- 303
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
EL+G+ N V ++S+A G+ +E+ DLF ++ + A +L
Sbjct: 304 ---------ELDGISYNVV-----ITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLL 349
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
S+ MG+ IH I G V+NAL+ +Y K K AQ +F I K+ V
Sbjct: 350 SIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTV 409
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
W+A+I A+ G+ EE +++
Sbjct: 410 P---------------------------------------WTAMISAYVQKGKHEEGINV 430
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
F M+ V A+ T + +L CA A++++GR++H ++R N+ + LL+ Y K
Sbjct: 431 FSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAK 490
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
CGC+ + F ++ +++ ++WN++IS Y NG + L +F++MI++G+KPD V+F++V
Sbjct: 491 CGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSV 550
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
LSACSH G V E F+ M + + + P+ EHY MVD+L R G EA ++ MP EP
Sbjct: 551 LSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEP 610
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT-ETTGSYMLLSNIYAASGRWEDAAKVR 638
+ +W ++LNSCR+HKN ++A+ A ++F + Y+ +SNIYA +G+W++ AKV+
Sbjct: 611 SEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVK 670
Query: 639 ISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
+ + +G++KV SW+E+K + H+FS+ + ++K + + L+ +ME KG PD
Sbjct: 671 KAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTT 730
Query: 699 IILWEM 704
L ++
Sbjct: 731 CALHDV 736
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 138/530 (26%), Positives = 239/530 (45%), Gaps = 83/530 (15%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S + +FG+L AR +F+ + +++ W ++ + + + A +LY MR+ G+
Sbjct: 80 MISGHLKFGKLSKARELFDGM---VERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGI 136
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D T ++ G + QI H HV+++G++ N+ + N L+ Y K +
Sbjct: 137 EPDYVTLVTLLSG---FGELETKNVIVQI-HTHVIKLGYEYNLMVCNSLVDAYCKTHCL- 191
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
Y+ A +LFK M L + VT+ SL++ ++
Sbjct: 192 -------------YL-----------------ASQLFKHM----LNKDTVTFNSLMTGYS 217
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
G EE ++LF + GI+ A +LS L G+ +HGFV+K F VF
Sbjct: 218 NEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVF 277
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V NAL+ Y KH V DE ++F ++ +LD
Sbjct: 278 VGNALLDYYSKHDQV-------------------------------DEVGKLFXEMPELD 306
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
G IS++ VI ++A NG+ +E+ DLFRK+Q + + LLS+ S L
Sbjct: 307 G--------ISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNL 358
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+GR+IH + V N V+N L++MY KC +E +F+ I K + W +MIS Y
Sbjct: 359 RMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAY 418
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
G E + F +M G D F ++L AC++ ++ GR++ +++R +
Sbjct: 419 VQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMS-N 477
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
+ + ++D + G + +A MP E N+ W L+++ + N D
Sbjct: 478 VYSGSALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWNALISAYAQNGNVD 526
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 121/230 (52%), Gaps = 8/230 (3%)
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+I ++K GF N + + + GD+ A +F ++ KN +S N +I+ + + G
Sbjct: 29 LIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFG 88
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+A E+F G +ER +SW+ +IG + + + +EA L+ M+ + +
Sbjct: 89 KLSKARELFD-------GMVER-TAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDY 140
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
VT+ LLS E N+ +IH HV+++ N++V N L++ Y K CL +F+
Sbjct: 141 VTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKH 200
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
+ KD +T+NS+++GY GL E A+ F E+ +G KP F A+LSA
Sbjct: 201 MLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSA 250
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 21/233 (9%)
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A +LN I H+V+ N N N +N +++ G L H VF+Q+ K+ I+ N
Sbjct: 19 APKPSLNSNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLN 78
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
MISG+ G A F+ M+E V++ ++ + E R++ M R
Sbjct: 79 MMISGHLKFGKLSKARELFDGMVERT----AVSWTILIGGYLQSNQSKEAFRLYADM-RR 133
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVK------NMPMEPNAYVWGTLLNS-CRMHK 595
IEP Y +V LL G L+ + IV+ + E N V +L+++ C+ H
Sbjct: 134 GGIEPD---YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTH- 189
Query: 596 NTDVAEAMASQIFG-LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
+ASQ+F ++ + T ++ L Y+ G E+A ++ + G+K
Sbjct: 190 ----CLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIK 238
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/549 (34%), Positives = 310/549 (56%), Gaps = 14/549 (2%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAK--MGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
VH L+ G + ++ L+ YA ++ + K+F+ V N +N++ G N
Sbjct: 49 VHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQN 108
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
+ A+ + +M + PN T+ +L + EE + + + K+G+
Sbjct: 109 NEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIR 168
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
+ + + + + G + G D V NA+I Y K G+V+ A+ LF +E+
Sbjct: 169 SAGIQMYGSFGEVEGARRMLG---EDGNSD-VICFNAMIDGYLKCGEVEAAKELFWSMED 224
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
KN+ SWN +++ A+ G+ +EA E+F++ M+ N ISWSA+I + G +E
Sbjct: 225 KNVGSWNVMVSGMAKCGMIEEARELFNE--------MKEKNEISWSAMIDGYIKGGYYKE 276
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
AL++F MQ ++ +S +L+ CA AL+ GR IH +V S + + ++ L++
Sbjct: 277 ALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVD 336
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY KCG L+ VFE++EKK++ TWN+MI G GM+G E+A+ F +M + F+P+G+
Sbjct: 337 MYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGIT 396
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
+ VLSAC+H+G+V+EG RIF+ M + IEP MEHY C+VDLLGRAGLL EA +++ +M
Sbjct: 397 LLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSM 456
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
PMEP+A VWG LL +CR H + ++ E + + L + +G Y LLSNIYA +GRW+D A
Sbjct: 457 PMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVA 516
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
VR K +G+K G S I+ +H F G+ +KN+ +L+ + +++ +G P
Sbjct: 517 NVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSP 576
Query: 696 DNDIILWEM 704
+ +L+++
Sbjct: 577 NTSQVLFDI 585
Score = 149 bits (377), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 188/395 (47%), Gaps = 48/395 (12%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYA--RFGRLFDARNVFETAPFDCKSSSLLW 100
++H LKQVH + TG +++ ++ YA F L A VFE P + ++
Sbjct: 42 SLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNFALKVFEYVP---NPNVFVF 98
Query: 101 NSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
N I++ + N A+ Y KM + FT+P + +AC + G VH
Sbjct: 99 NIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKAC----TAAEAAEEGVQVHA 154
Query: 161 HVLQMGFQGNVHI-------------------------------VNELIGMYAKMGQMSD 189
HV++ G G+VHI N +I Y K G++
Sbjct: 155 HVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEA 214
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
+ +LF + KN SWN+M SG A + A ELF M+ E N ++W++++ + +
Sbjct: 215 AKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMK----EKNEISWSAMIDGYIK 270
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFV 309
G +E +++F++M++ I ++ VL+ CA+L A G+ IH +V +
Sbjct: 271 GGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVL 330
Query: 310 KNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
AL+ +Y K G + +A ++F ++E+K + +WNA+I G ++A+E+F +++K
Sbjct: 331 GTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQK--- 387
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
RPN I+ V+ A A +G +E L +F M+
Sbjct: 388 -QKFRPNGITLLGVLSACAHSGMVDEGLRIFNSME 421
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 143/296 (48%), Gaps = 14/296 (4%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S A+ G + +AR +F + + + W++++ + G Y+ AL+++ M++ +
Sbjct: 233 MVSGMAKCGMIEEARELFNEMK---EKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEI 289
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
F V+ AC +G+ G+ +H +V + + L+ MYAK G++
Sbjct: 290 RPRKFVLSSVLAACANLGAL----DQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLD 345
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
++ +F+K+ K +WN M G ++ + A+ELF +M+ + PN +T +LS+ A
Sbjct: 346 MAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACA 405
Query: 249 RCGRLEETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
G ++E + +F+ M + GIE G E V+ + A +G+ + E
Sbjct: 406 HSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLG--RAGLLGEA-EEVMYSMPMEPSA 462
Query: 308 FVKNALICVYGKHGDVKVAQ---NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
V AL+ KHGDV++ + + E+E +N + L YA AG D+ V
Sbjct: 463 AVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANV 518
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 17/241 (7%)
Query: 37 LLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C + L Q +H + + A L ++ +YA+ GRL A +VFE
Sbjct: 299 VLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKME--- 355
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K WN+++ +G E+A++L+ KM+K +G T V+ AC G
Sbjct: 356 KKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLR 415
Query: 154 -FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
F + + ++ G + + V +L+G +G+ + ++ + W +
Sbjct: 416 IFNSMEEVYGIEPGME-HYGCVVDLLGRAGLLGEAEEV--MYSMPMEPSAAVWGALLGAC 472
Query: 213 ALNFDCDGALELFKRME--LEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
+ G +EL +R+ L LEP +LLS+ +AR GR ++ ++ +M++RG++
Sbjct: 473 RKH----GDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVK 528
Query: 270 V 270
Sbjct: 529 T 529
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 209/685 (30%), Positives = 343/685 (50%), Gaps = 84/685 (12%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S YA+ GR+ +AR +F+ P + + + WNS++ + N L E+A +L+ +M K
Sbjct: 52 MISAYAKNGRIANARELFDLMP---QRNLVSWNSMIAGYLHNELVEDAARLFDRMFK--- 105
Query: 129 LGDGFTFPLVIRACKFMGS-------FRFRFSFGQIVHNHVLQMGFQ------------- 168
D +++ L+I +G F V + L G+
Sbjct: 106 -RDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFD 164
Query: 169 ----GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
NV N ++ Y K G+M + F+ + +N +SWN+M G+ D D A
Sbjct: 165 EMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMF 224
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI-----EVGAEAIAVVL 279
FK++ PN V+W ++LS A GR+ E +LF+ M + + +GA +
Sbjct: 225 FKKIP----TPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQI 280
Query: 280 SVCADLAADHMGK-------VIHGFVIKGGF-----------EDYVFVKNALICVYGKHG 321
L + K +I+G+V G + + A+I Y + G
Sbjct: 281 DDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSG 340
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD------------- 368
+ A +FS+I ++ V WN++IT YA G DEA+ +F ++ D
Sbjct: 341 RMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQ 400
Query: 369 GGSMERP----------NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
G M++ NV+SW+++I + NG EAL+ F M+ + TI
Sbjct: 401 AGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCC 460
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
L A AALN+G ++H ++ ++ V+N +L MY K G + E VF +I+ KD+
Sbjct: 461 LRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDV 520
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
++WNS+I+GY +NG G+ A+ FE M G PD V F +LSAC+H G V++G +F
Sbjct: 521 VSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKS 580
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
M + I+PQ EHYAC+++LLGR G L+EA +IV+ M +A +WG LL +CR+H N +
Sbjct: 581 MTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLE 640
Query: 599 VAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
+A+ A ++ L + +Y+LLSN++A +GRW+ +VR+ K +K G SWIE+
Sbjct: 641 LAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENKAEKQPGCSWIEID 700
Query: 659 RKIHMFSSGNSLQSDLK-NVCEVLE 682
++H F S DL+ +C +L+
Sbjct: 701 NQLHCFLS--KAPPDLRPEICNILK 723
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 141/558 (25%), Positives = 253/558 (45%), Gaps = 79/558 (14%)
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
N+ N +I YAK G+++++ +LFD + +N +SWN M +G+ N + A LF RM
Sbjct: 45 NIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDRM- 103
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
+ + +WT +++ + R G LE+ +LF+++ + V A+ +
Sbjct: 104 ---FKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNAL--IAGYAKKRLFRE 158
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
K+ ++K V N+++ Y K+G +++ F + E+N+VSWN ++ Y
Sbjct: 159 AKKLFDEMLVKN-----VVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYV 213
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
G D A F ++ PNV+SW ++ FA GR EA +LF +M +V
Sbjct: 214 GVGDLDSAWMFFKKIPT--------PNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLV 265
Query: 410 ANSVTISG------------LLSVCAESAALNIGREIHGHV-------VRVSMN----KN 446
+ + I L E +++ I+G+V R +N KN
Sbjct: 266 SWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKN 325
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
I Q ++N Y++ G ++E + +F QI +D + WNSMI+GY G + AL F+EM+
Sbjct: 326 IAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRLFQEMV- 384
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
D V++ +++A + AG +++ +F+ M E + + ++ + GL
Sbjct: 385 ---CKDMVSWNTMIAAYAQAGQMDKALEMFNEMQ-----ERNVVSWNSLITGYVQNGLYF 436
Query: 567 EASD---IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETT-GSYMLLS 622
EA + ++K +P+ T + C A + Q+ L +T G+ + +
Sbjct: 437 EALNCFILMKQQGEKPDQ----TTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVK 492
Query: 623 N----IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
N +YA SGR +A V K K + SW + +G +L K
Sbjct: 493 NAILTMYAKSGRVPEAENVFAEIKXKDV-----VSW-------NSLIAGYALNGCGKEAV 540
Query: 679 EVLEELALQMENKGCVPD 696
E+ E + L +G +PD
Sbjct: 541 ELFEVMPL----RGIIPD 554
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 161/335 (48%), Gaps = 30/335 (8%)
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
E + N++I Y K+G + A+ LF + ++N+VSWN++I Y L ++A +F +
Sbjct: 43 ERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLFDR 102
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
+ K D + SW+ +I + G E+A +LF L ++V + L++ A
Sbjct: 103 MFKRD--------IYSWTLMITCYTRIGELEKARELF---NLLPDKQDTVCRNALIAGYA 151
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
+ +++ + + KN++ N +L+ Y K G ++ G FE + ++++++WN
Sbjct: 152 KKRLFREAKKLFDEM----LVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNL 207
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
M+ GY G ++A F+++ P+ V++V +LS +H G + E R +F+ M +
Sbjct: 208 MVDGYVGVGDLDSAWMFFKKIP----TPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTK- 262
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS-CRMHKNTDVAEA 602
+ + M+ R + +A + MP E ++ W ++N R+ K E
Sbjct: 263 ----NLVSWNAMIGAYVRENQIDDAYKLFMEMP-EKDSVSWTAMINGYVRVGKLLQAREI 317
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
+ + I T + N Y SGR ++A ++
Sbjct: 318 LNLMPYKNIAAQTA----MINGYLQSGRMDEANEI 348
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFDCKSSSLLWNSILRVN 107
Q+H+ I TG F+ +L++YA+ GR+ +A NVF E D S WNS++
Sbjct: 475 QLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFAEIKXKDVVS----WNSLIAGY 530
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS-FGQIVHNHVLQMG 166
NG + A++L+ M G++ D TF ++ AC G + F + + ++
Sbjct: 531 ALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQ 590
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR-VKNYISWNMMFSGFALNFDCDGALELF 225
+ ++N L+G ++G++ ++ ++ ++ V + W + ++ + + L +
Sbjct: 591 SEHYACVIN-LLG---RVGRLEEAVEIVQGMKTVSSAKIWGALLWACRIHHNLE--LAKY 644
Query: 226 KRMELEGLEPNFVTWTSLLSS-HARCGRLE 254
L LEP + LLS+ HA GR +
Sbjct: 645 SAERLLALEPQNASNYVLLSNMHAEAGRWD 674
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 186/578 (32%), Positives = 295/578 (51%), Gaps = 81/578 (14%)
Query: 138 VIRACKFMGSFRFR-FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
+I AC R+R + +H H+ F G+V + N LI +Y K G ++D+ ++FD
Sbjct: 70 LITACA-----RYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDG 124
Query: 197 VRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
+ ++ SW TSL++ +A+ +E
Sbjct: 125 MPARDMCSW-----------------------------------TSLIAGYAQNDMPDEA 149
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
+ L M + + A +L A+ +G+ IH +K
Sbjct: 150 LGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVK---------------- 193
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
Y H DV V +AL+ YA G D A+ VF QLE +G
Sbjct: 194 YDWHDDVYVG---------------SALLDMYARCGRMDMAIAVFDQLESKNG------- 231
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
+SW+A+I FA G GE L +F +MQ A T S + S A AL G+ +H
Sbjct: 232 -VSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHA 290
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
H+++ + V N +L+MY K G + + VF++++KKD++TWNSM++ + GLG
Sbjct: 291 HMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGRE 350
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
A+ FEEM + G + + F+++L+ACSH GLV EG++ FDMM +E+ +EP+++HY +V
Sbjct: 351 AVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMM-KEYNLEPEIDHYVTVV 409
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
DLLGRAGLL +A + MPM+P A VWG LL SCRMHKN + + A +F L + TG
Sbjct: 410 DLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTG 469
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKN 676
+LL NIYA++G+W+ AA+VR K G+KK SW+E++ +HMF + + +
Sbjct: 470 PPVLLYNIYASTGQWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEE 529
Query: 677 VCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQ 714
+ + EE+++Q+ G VP+ D +L + ++ ++Q
Sbjct: 530 IYKKWEEISIQIRKAGYVPNTDYVLLHVDEQERQAKLQ 567
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 187/392 (47%), Gaps = 52/392 (13%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ L+ C +++ + +H L + S FL ++ +Y + G + DAR VF+ P
Sbjct: 67 YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMP 126
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
S W S++ N + + AL L M + +GFTF +++A S
Sbjct: 127 ARDMCS---WTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASS-- 181
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H ++ + +V++ + L+ MYA+ G+M + +FD++ KN +SWN + +
Sbjct: 182 --GIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIA 239
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
GFA D + L +F M+ G E T++S+ S+ A G LE+
Sbjct: 240 GFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQ--------------- 284
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
GK +H +IK G FV N ++ +Y K G + A+ +F
Sbjct: 285 --------------------GKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVF 324
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+++K++V+WN+++T++A+ GL EAV F ++ K G + N I++ +++ A +
Sbjct: 325 DRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKC-GVHL---NQITFLSILTACSHG 380
Query: 391 G---RGEEALDLFRKMQLAKVVANSVTISGLL 419
G G++ D+ ++ L + + VT+ LL
Sbjct: 381 GLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLL 412
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 5/205 (2%)
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
+ A AS G + LD +LA A L++ CA +L+ R IH H+
Sbjct: 39 VPAAASTGIIRDTLDSVDARELA---ATPRLYHSLITACARYRSLDDARAIHAHLAGSQF 95
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
++ + N L+++Y KCG + + VF+ + +D+ +W S+I+GY N + + AL
Sbjct: 96 AGSVFLDNSLIHLYCKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPG 155
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M+ FKP+G F ++L A + G +I + V+ + + + ++D+ R G
Sbjct: 156 MLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVK-YDWHDDVYVGSALLDMYARCG 214
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLL 588
+ A + + + N W L+
Sbjct: 215 RMDMAIAVFDQLESK-NGVSWNALI 238
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 199/641 (31%), Positives = 327/641 (51%), Gaps = 103/641 (16%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSL---LWNSIL 104
++ H ++ G + F+ ++ +YA+ G + A V++ K +SL N ++
Sbjct: 133 RRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYD------KMTSLDAATCNCLI 186
Query: 105 RVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
NG + A ++++++ +G + +T+ ++ C + + + G+ +H HV++
Sbjct: 187 SAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQE----GKQLHAHVVK 242
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
M + + N L+ +Y+K G M ++ +F+ + +N ISW +GF + D AL+
Sbjct: 243 MQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQ 302
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG----------------- 267
F M G+EPN T++ +L+S CG DL M++R
Sbjct: 303 FSMMRESGIEPNEFTFSIVLAS---CG-----CDLGKWMKQRTSSNRWGGQHLMSIFLLR 354
Query: 268 --IEVGAEAIAV---------VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICV 316
IE G + ++ +L C L+ G+ +H ++K FE ++ +ALI +
Sbjct: 355 KMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYM 414
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
Y K G V ++A VF + PN
Sbjct: 415 YSKCGHV-------------------------------EKACRVFDWI----------PN 433
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
V+SW+ +I F+ +M +SVTIS LL C A L G+EIHG
Sbjct: 434 VVSWNTLIAGFS-------------QMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHG 480
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
+ + + + K++ V++ L++MY KCG + E ++F + +++ +TWNS+I GY +G
Sbjct: 481 YAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNE 540
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
A+ F +M E+ K D + F AVL+ACSHAG+V G +F M ++RIEP++EHYACMV
Sbjct: 541 AIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMV 600
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
DLLGRAG L EA D++K MP+EP+ +VWG LL +CR H N ++AE A +F L E+ G
Sbjct: 601 DLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPG 660
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
S +LLSN+YA +GRW +AAK++ K + K G SWIE
Sbjct: 661 SSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWIEA 701
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 208/457 (45%), Gaps = 80/457 (17%)
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ H V+++G + + LI MYAK G++ + +++DK+ + + N + S +A
Sbjct: 131 LGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYA 190
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
N A ++F ++ G PN T++++
Sbjct: 191 RNGFFVQAFQVFMQIGNMGTRPNHYTYSTM------------------------------ 220
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
L+VC ++A GK +H V+K + V NAL+ +Y K G ++ A+ +F +
Sbjct: 221 -----LAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENL 275
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF------ 387
++NI+SW A I + + G +A++ FS + + S PN ++S V+ +
Sbjct: 276 GQRNIISWTASINGFYQHGDFKKALKQFSMMRE----SGIEPNEFTFSIVLASCGCDLGK 331
Query: 388 ------ASNGRGEE---ALDLFRKM-----QLAKVVANSVTISGLLSVCAESAALNIGRE 433
+SN G + ++ L RKM + + N + +L C + G
Sbjct: 332 WMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGEN 391
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+H +++ S + + + L+ MY KCG +E+ VF+ I ++++WN++I+G
Sbjct: 392 MHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWI--PNVVSWNTLIAG------ 443
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI--FDMMVREFRIEPQMEH 551
F +M++ GF P V ++L AC++ + G+ I + M++ +E +
Sbjct: 444 -------FSQMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVI---GVEKDVYV 493
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ +VD+ + G + EA + MP E N W +L+
Sbjct: 494 RSALVDMYAKCGYISEAKILFYMMP-ERNTVTWNSLI 529
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 187/425 (44%), Gaps = 111/425 (26%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ +L C TI + KQ+H ++ + + +L++Y++ G + +A VFE
Sbjct: 217 YSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLG 276
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC-------- 142
+ + + W + + +G ++ ALK + MR+ G+ + FTF +V+ +C
Sbjct: 277 ---QRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWM 333
Query: 143 ------------KFMGSFRFR----------------FSFGQIV---------------H 159
M F R F I+ H
Sbjct: 334 KQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMH 393
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+L+ F+ + +I++ LI MY+K G + + ++FD + N +SWN + +GF+ D
Sbjct: 394 TVILKNSFESDAYIISALIYMYSKCGHVEKACRVFD--WIPNVVSWNTLIAGFSQMLD-- 449
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
+G P+ VT +SLL +
Sbjct: 450 -----------QGFCPSSVTISSLLPA--------------------------------- 465
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
C ++A GK IHG+ + G E V+V++AL+ +Y K G + A+ LF + E+N V
Sbjct: 466 --CTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTV 523
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
+WN+LI YA G C+EA+E+F+Q+E+ D + + ++++AV+ A + G E L
Sbjct: 524 TWNSLIFGYANHGYCNEAIELFNQMEESD----TKLDHLTFTAVLNACSHAGMVELGESL 579
Query: 400 FRKMQ 404
FRKMQ
Sbjct: 580 FRKMQ 584
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 162/362 (44%), Gaps = 55/362 (15%)
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
LS C +G+ H FV+K G FV +LI +Y K G+V A ++ ++ +
Sbjct: 119 ALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLD 178
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
+ N LI++YA G +A +VF Q+ G RP
Sbjct: 179 AATCNCLISAYARNGFFVQAFQVFMQI----GNMGTRP---------------------- 212
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
N T S +L+VC +A+ G+++H HVV++ V N LL +Y
Sbjct: 213 -------------NHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLY 259
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG +EE +VFE + ++++I+W + I+G+ +G + AL F M E+G +P+ F
Sbjct: 260 SKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFS 319
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
VL++C G + M + + + LL + +++E + K +
Sbjct: 320 IVLASC--------GCDLGKWMKQRTSSNRWGGQHLMSIFLLRK--MIEEGN---KPTSL 366
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML--LSNIYAASGRWEDAA 635
PN +V ++L +C + E M + I E+ +Y++ L +Y+ G E A
Sbjct: 367 RPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESD-AYIISALIYMYSKCGHVEKAC 425
Query: 636 KV 637
+V
Sbjct: 426 RV 427
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 198/635 (31%), Positives = 311/635 (48%), Gaps = 83/635 (13%)
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+Y++ AR V P + + W S++ NG + AL + +MR+ GV+ +
Sbjct: 1 MYSKLDHPESARLVLRLTP---ARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPN 57
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF 191
FTFP +A + S R + G+ +H ++ G +V + MY K D+
Sbjct: 58 DFTFPCAFKA---VASLRLPVT-GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDAR 113
Query: 192 KLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
KLFD++ E N TW + +S+ G
Sbjct: 114 KLFDEIP-----------------------------------ERNLETWNAFISNSVTDG 138
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
R E ++ F R+ + L+ C+D ++G +HG V++ GF+ V V N
Sbjct: 139 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 198
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
LI YGK ++ ++ +F+E+ KN VS
Sbjct: 199 GLIDFYGKCKQIRSSEIIFTEMGTKNAVS------------------------------- 227
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
W +++ A+ N E+A L+ + + V + IS +LS CA A L +G
Sbjct: 228 --------WCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELG 279
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
R IH H V+ + + I V + L++MY KCGC+E+ F+++ +K+L+T NS+I GY
Sbjct: 280 RSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQ 339
Query: 492 GLGENALATFEEMIE--AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
G + ALA FEEM G P+ + FV++LSACS AG V G +IFD M + IEP
Sbjct: 340 GQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGA 399
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
EHY+C+VD+LGRAG+++ A + +K MP++P VWG L N+CRMH + A +F
Sbjct: 400 EHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK 459
Query: 610 LITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNS 669
L + +G+++LLSN +AA+GRW +A VR K G+KK AG SWI VK ++H F + +
Sbjct: 460 LDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDR 519
Query: 670 LQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
K + L +L +ME G PD + L+++
Sbjct: 520 SHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDL 554
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 162/357 (45%), Gaps = 44/357 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H + G F+ +Y + DAR +F+ P + + WN+ + +
Sbjct: 78 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP---ERNLETWNAFISNS 134
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
V++G A++ +++ R++ + TF + AC S + G +H VL+ GF
Sbjct: 135 VTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC----SDWLHLNLGMQLHGLVLRSGF 190
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+V + N LI Y K Q+ S +F ++ KN +SW + + + N + + A L+ R
Sbjct: 191 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR 250
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
RK +E I+ VLS CA +A
Sbjct: 251 -----------------------------------SRKDIVETSDFMISSVLSACAGMAG 275
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+G+ IH +K E +FV +AL+ +YGK G ++ ++ F E+ EKN+V+ N+LI
Sbjct: 276 LELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGG 335
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
YA G D A+ +F ++ G PN +++ +++ A + G E + +F M+
Sbjct: 336 YAHQGQVDMALALFEEMAPRGCGPT--PNYMTFVSLLSACSRAGAVENGMKIFDSMR 390
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/467 (36%), Positives = 269/467 (57%), Gaps = 10/467 (2%)
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
+P + L+ +++ G + L+ M +G + + S CA L++ G++
Sbjct: 44 KPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRM 103
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
+H +K GF VF AL+ +Y K G + +A+ F E+ +++ +WN++I YA G
Sbjct: 104 LHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGD 163
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL-AKVVANS 412
+ A+E+F M NV SW+A+I +A NG+ +AL +F M+ ++ N
Sbjct: 164 LEGALELFRL--------MPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNE 215
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
VT++ +L CA AL +G I + KN+ V N LL MY +CG +++ VFE+
Sbjct: 216 VTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEE 275
Query: 473 IE-KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
I+ +++L +WNSMI G ++G + A+ F +M+ G PD V FV VL AC+H G+V E
Sbjct: 276 IDGRRNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVE 335
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
G+ F+ M R+F I P++EHY CMVDLLGRAG L+EA D++ MPMEP++ VWGTLL +C
Sbjct: 336 GQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGAC 395
Query: 592 RMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
H + ++AE A +F L G+Y++LSNIYA +GRW+ A++R K + K AG
Sbjct: 396 SFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGKITKAAG 455
Query: 652 QSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
S+IE IH F + S + +L+E++++M+ G V D+D
Sbjct: 456 YSFIEEGGHIHKFIVEDRSHSRSDEIYALLDEVSMKMKLHGNVNDSD 502
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/431 (27%), Positives = 218/431 (50%), Gaps = 36/431 (8%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
+++LKQ+ + G + L +L I + + A +F+ P K + L+N +
Sbjct: 1 MNRLKQIQAYTLRNGIEHTKQLIVSLLQIPS----IPYAHKLFDFIP---KPTVFLYNKL 53
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
++ S+G + LY +M G + +F + AC + S + G+++H H +
Sbjct: 54 IQAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQ----GRMLHTHFV 109
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
+ GF +V + L+ MYAK+G +S + K FD++ V++ +WN M +G+A D +GALE
Sbjct: 110 KSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYARCGDLEGALE 169
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK----RGIEVGAEAIAVVL 279
LF+ M N +WT+++S +A+ G+ + + +F MM + R EV +A VL
Sbjct: 170 LFRLMPAR----NVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNEV---TLASVL 222
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE-EKNI 338
CA+L A +G+ I + G+ ++V NAL+ +Y + G + A +F EI+ +N+
Sbjct: 223 PACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNL 282
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
SWN++I A G CDEA+E+F ++ + +G + P+ +++ V+ A G E
Sbjct: 283 CSWNSMIMGLAVHGRCDEAIELFYKMLR-EGAA---PDDVTFVGVLLACTHGGMVVEGQH 338
Query: 399 LFRKMQLAKVVANSVTISG-LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
F M+ +A + G ++ + + L RE H ++R+ M + +V LL
Sbjct: 339 FFESMERDFSIAPKLEHYGCMVDLLGRAGEL---REAHDLILRMPMEPDSVVWGTLLG-- 393
Query: 458 MKCGCLEEGHL 468
C GH+
Sbjct: 394 ---ACSFHGHV 401
Score = 40.8 bits (94), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 96/232 (41%), Gaps = 19/232 (8%)
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
H +F+ I K + +N +I Y +G + + +M G P+ +F + SAC+
Sbjct: 36 HKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASL 95
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
+GR + V+ + +VD+ + GLL A M + + W +
Sbjct: 96 SSHQQGRMLHTHFVKS-GFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVR-DVPTWNS 153
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLI-TETTGSYMLLSNIYAASGRW----------EDAA 635
++ + D+ A+ ++F L+ S+ + + YA +G++ E+
Sbjct: 154 MIAG--YARCGDLEGAL--ELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEET 209
Query: 636 KVRISAKTKG--LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
++R + T L A +EV +I +++ GN +L +LE A
Sbjct: 210 EMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYA 261
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/592 (32%), Positives = 306/592 (51%), Gaps = 42/592 (7%)
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI-VHNHVLQM 165
+VS E A+ YV+M G D +TFP +++A + +H HV++
Sbjct: 26 SVSGHGAEEAVAGYVRMLAGGARPDAYTFPSLLKAAAAARGAAVAAASVGGAIHAHVVKF 85
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
G + N H + LI MYA G + + L C
Sbjct: 86 GMESNAHAASSLIVMYAARGDGAAARA--------------------VLEAAC------- 118
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCAD 284
+ G P V W +L+S H R GR E + F DM+R + ++V LS C
Sbjct: 119 --LATGGGAP--VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSV-LSACGK 173
Query: 285 LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNAL 344
+G +H V++ G V+NAL+ +Y + GD+ A LF ++ +++ SW ++
Sbjct: 174 GKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSV 233
Query: 345 ITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
I+ +G D A ++F + + D I+W+A+I + GR +AL+ FR MQ
Sbjct: 234 ISGLVRSGQVDRARDLFDHMPERD--------TIAWTAMIDGYVQVGRFRDALETFRYMQ 285
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
+ KV A+ T+ +++ CA+ AL G ++ R+ + ++ V N L++MY KCG +E
Sbjct: 286 ICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIE 345
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
VF+ + +D TW ++I G +NG GE A+ F M+ A PD V FV VL+AC+
Sbjct: 346 RALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACT 405
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
HAGLV++GR F M + I P + HY C++D+LGRAG L+EA D + MPM+PN+ +W
Sbjct: 406 HAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIW 465
Query: 585 GTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTK 644
GTLL SCR++ N+++ E A ++ L + + +Y+LLSN+YA S RW+D ++R K
Sbjct: 466 GTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEK 525
Query: 645 GLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
G+KK G S IE+ IH F + + K + LE + + N G VPD
Sbjct: 526 GIKKEPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENVLTDLRNAGYVPD 577
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 186/383 (48%), Gaps = 16/383 (4%)
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ ++WN+++ + +G +E + +V M + + T+ V+ AC G + G
Sbjct: 125 APVMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSAC---GKGK-DLLLG 180
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
VH VL+ G + + N L+ MYA+ G M ++ LF+ +++++ SW + SG +
Sbjct: 181 MQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRS 240
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
D A +LF M E + + WT+++ + + GR + ++ F M+ + +
Sbjct: 241 GQVDRARDLFDHMP----ERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTM 296
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
V++ CA L A G+ ++ + G + VFV NALI +Y K G ++ A ++F ++
Sbjct: 297 VSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHN 356
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
++ +W A+I A G +EA+++F ++ + +++ P+ +++ V+ A G ++
Sbjct: 357 RDKFTWTAIILGLAVNGRGEEAIDMFYRMLR----ALQTPDEVTFVGVLTACTHAGLVDK 412
Query: 396 ALDLFRKMQLAKVVANSVTISG-LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
+ F M A ++ +V G L+ V + L +E + ++ M N + LL
Sbjct: 413 GREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKL---KEALDTIDKMPMKPNSTIWGTLL 469
Query: 455 NMYMKCGCLEEGHLVFEQIEKKD 477
G E G L E++ + D
Sbjct: 470 ASCRVYGNSEIGELAAERLLELD 492
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/644 (30%), Positives = 325/644 (50%), Gaps = 94/644 (14%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAF------LAARVLSIYARFGRLFDA-RNVF--- 86
LL CK++ ++KQ+H +I S L ++ S+ + L D+ +N++
Sbjct: 32 LLSSCKSVREIKQIHASIIKANTTRSTTTLPIISLCTKITSLLQQDVHLADSIQNLWYAS 91
Query: 87 ETAPFDCKSSSLLWNSILR-VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
A F ++ ++N+I++ ++ SN + + LY +M +G+ D +T P +++AC
Sbjct: 92 SLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKAC--- 148
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
S F +H H ++ G N+ + N L+ YA G + K+FD
Sbjct: 149 -SQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFD---------- 197
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
+G + ++WT+L+ ++++ G E + F M
Sbjct: 198 -------------------------QGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNC 232
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY--VFVKNALICVYGKHGDV 323
+ + VVLS C+ L +GK I ++ F+ + VF+ NAL+ +Y K G
Sbjct: 233 TADRM---TLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQP 289
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
+A+ LF + KN+ +SW+++
Sbjct: 290 HLARQLFHLMPVKNL---------------------------------------VSWNSM 310
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
I A G +EAL +FR+MQ + +SVT+ G+L+ CA L +G+ +H ++ + M
Sbjct: 311 ISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHM 370
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
+ V N L++MY KCG +++ +VF+ ++ KD+ ++ +MI G+ M+G + ALA F E
Sbjct: 371 KADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSE 430
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M G +PD V V VLSACSHAGL+ EGRR F M R + ++PQ EHY CMVDLLGRAG
Sbjct: 431 MPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAG 490
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
L+ EA MP+ P+A VWG+LL +C++H ++ E + ++ + E G+Y+L+SN
Sbjct: 491 LISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEMEPERDGAYILMSN 550
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG 667
IY+++ RW DA K R + K +KK G S IEV +H F G
Sbjct: 551 IYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEVDGMVHEFRKG 594
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 185/636 (29%), Positives = 316/636 (49%), Gaps = 81/636 (12%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H + +G S F+++ ++ +Y + G++ VFE + + W +I+ V
Sbjct: 146 LHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKM---MTRNVVSWTAIIAGLVH 202
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
G L + +M + V D TF + ++A + G+ +H ++ GF
Sbjct: 203 AGYNMEGLLYFSEMWRSKVGYDSHTFAIALKA----SADSSLLHHGKAIHTQTIKQGFDE 258
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
+ ++N L MY K G+ +LF+K+R+
Sbjct: 259 SSFVINTLATMYNKCGKPDYVMRLFEKMRM------------------------------ 288
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
P+ V+WT+L+S++ + G E ++ F MRK + A V+S CA+LAA
Sbjct: 289 -----PDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAK 343
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
G+ IHG V++ G + + V N++I T Y+
Sbjct: 344 WGEQIHGHVLRLGLVNALSVANSII-------------------------------TLYS 372
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+ GL A VF + R ++ISWS +I ++ G +EA D M+
Sbjct: 373 KCGLLKSASLVFH--------GITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPK 424
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
N +S +LSVC A L G+++H H++ + ++ +V + +++MY KCG ++E +
Sbjct: 425 PNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKI 484
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F ++ D+I+W +MI+GY +G + A+ FE++ G KPD V F+ VL+AC+HAG+V
Sbjct: 485 FNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMV 544
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ G F +M +RI P EHY C++DLL RAG L EA I+++MP + VW TLL
Sbjct: 545 DLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLR 604
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
+CR+H + D A Q+ L + G+++ L+NIYAA GRW++AA +R K+KG+ K
Sbjct: 605 ACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKE 664
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
G SW+ V +++ F +G+ +++ VL+ L+
Sbjct: 665 RGWSWVNVNDQLNAFVAGDQAHPQSEHITTVLKLLS 700
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 151/324 (46%), Gaps = 42/324 (12%)
Query: 44 IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSI 103
+H K +H Q I G + S+F+ + ++Y + G+ +FE + W ++
Sbjct: 241 LHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRM---PDVVSWTTL 297
Query: 104 LRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVL 163
+ V G E+A++ + +MRK V + +TF VI +C + + + +G+ +H HVL
Sbjct: 298 ISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAK----WGEQIHGHVL 353
Query: 164 QMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
++G + + N +I +Y+K G + + +F + K+ ISW+ + S ++ A +
Sbjct: 354 RLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFD 413
Query: 224 LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCA 283
M EG +PN A++ VLSVC
Sbjct: 414 YLSWMRREGPKPNEF-----------------------------------ALSSVLSVCG 438
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
+A GK +H ++ G + V +A+I +Y K G V+ A +F+ ++ +I+SW A
Sbjct: 439 SMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTA 498
Query: 344 LITSYAEAGLCDEAVEVFSQLEKL 367
+I YAE G EA+ +F ++ +
Sbjct: 499 MINGYAEHGYSQEAINLFEKISSV 522
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 162/353 (45%), Gaps = 42/353 (11%)
Query: 238 VTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
++WT+L++ + E + LF +M G + I+V L CA G+++HG
Sbjct: 89 ISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGVNICFGELLHG 148
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
F +K G VFV +ALI +Y K G + ++
Sbjct: 149 FSVKSGLIHSVFVSSALIDMYMKVGKI-------------------------------EQ 177
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
VF ++ M R NV+SW+A+I G E L F +M +KV +S T +
Sbjct: 178 GCRVFEKM-------MTR-NVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFA 229
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
L A+S+ L+ G+ IH ++ +++ V N L MY KCG + +FE++
Sbjct: 230 IALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMP 289
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D+++W ++IS Y G E+A+ F+ M ++ P+ F AV+S+C++ G +I
Sbjct: 290 DVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIH 349
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
++R + + ++ L + GLL+ AS + + + W T+++
Sbjct: 350 GHVLR-LGLVNALSVANSIITLYSKCGLLKSASLVFHGIT-RKDIISWSTIIS 400
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 106/216 (49%), Gaps = 7/216 (3%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+Q+H ++ G + +A ++++Y++ G L A VF + + W++I+ V
Sbjct: 346 EQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGIT---RKDIISWSTIISVY 402
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
G + A MR+ G + F V+ C M G+ VH H+L +G
Sbjct: 403 SQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMA----LLEQGKQVHAHLLCIGI 458
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ + +I MY+K G + ++ K+F+ +++ + ISW M +G+A + A+ LF++
Sbjct: 459 DHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEK 518
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
+ GL+P++V + +L++ G ++ F +M
Sbjct: 519 ISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLM 554
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 86/197 (43%), Gaps = 17/197 (8%)
Query: 399 LFRKMQLA-KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
L+++ ++A ++N ++G + C E I + + V N+L N L
Sbjct: 11 LYKETRVALHYISNRYILTGTATECRELIQQPIQEQPAENAYSV---HNMLELNSELKQL 67
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM-IEAGFKPDGVAF 516
+K G L + +F+++ +D I+W ++I+GY AL F M + G + D
Sbjct: 68 VKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMI 127
Query: 517 VAVLSACSHAGLVNEGRRI-FDMMVREFRIEPQMEH----YACMVDLLGRAGLLQEASDI 571
L AC+ G I F ++ F ++ + H + ++D+ + G +++ +
Sbjct: 128 SVALKACA------LGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRV 181
Query: 572 VKNMPMEPNAYVWGTLL 588
+ M M N W ++
Sbjct: 182 FEKM-MTRNVVSWTAII 197
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 190/652 (29%), Positives = 322/652 (49%), Gaps = 81/652 (12%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH ++ G ++ F+ ++ Y+ G + AR VF+ + W ++
Sbjct: 68 VHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEIS---SKDMVSWTGMIASYAE 124
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
N + AL+ + +MR G + FTF V++AC + +F G+ VH VL+ ++
Sbjct: 125 NDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNF----DAGKTVHCSVLKTNYER 180
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
++++ L+ +Y + G D+++ F + + I W+ M
Sbjct: 181 DLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFM--------------------- 219
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
+S A+ G+ E+ +++F MR+ + + VL AD+ +
Sbjct: 220 --------------ISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLD 265
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+ K IHG +K G VFV NAL+ YA
Sbjct: 266 LSKTIHGHALKAGLSTDVFVSNALM-------------------------------ACYA 294
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+ G ++++E+F L N +SW+ +I ++ G GE AL LF M +V
Sbjct: 295 KCGCIEQSMELFEALSD--------RNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQ 346
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
A VT S +L CA AAL +G ++H + +++ V N L++MY KCG +++ +
Sbjct: 347 ATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFM 406
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F+ ++ +D ++WN++I GY M+GLG A+ F M E KPD + FV VLSACS+ G +
Sbjct: 407 FDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRL 466
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+EG++ F M +++ IEP MEHY CMV L+GR+G L +A ++++P EP+ +W LL
Sbjct: 467 DEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLG 526
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
+C +H + ++ A ++ L S++LLSNIYA + RW + A VR K KG+KK
Sbjct: 527 ACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKE 586
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
G SWIE + +H F+ ++ +DLK + +LE L ++ G P + +L
Sbjct: 587 PGLSWIENQGNVHCFTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVL 638
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/446 (24%), Positives = 202/446 (45%), Gaps = 68/446 (15%)
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
E E N V++ +L+ +A+ + E +LF + G E+ VL + + +
Sbjct: 5 EMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAEL 64
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
G+++HG V+K G+ F+ ALI Y G V +A+ +F EI K++VSW +I SYAE
Sbjct: 65 GRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAE 124
Query: 351 AGLCDEAVEVFSQ----------------------LEKLDGGSMERPNVI---------- 378
EA+E FSQ L+ D G +V+
Sbjct: 125 NDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYV 184
Query: 379 ----------------SWSA--------------VIGAFASNGRGEEALDLFRKMQLAKV 408
+W A +I FA +G+ E+AL++F +M+ A V
Sbjct: 185 GVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFV 244
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+ N T S +L A+ +L++ + IHGH ++ ++ ++ V N L+ Y KCGC+E+
Sbjct: 245 IPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSME 304
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
+FE + ++ ++WN++I Y G GE AL+ F M+ + V + ++L AC+
Sbjct: 305 LFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAA 364
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ G ++ + + + A ++D+ + G +++A + + + + W ++
Sbjct: 365 LELGLQVHCLTAKTIYGQDVAVGNA-LIDMYAKCGSIKDARFMFDMLDLR-DKVSWNAII 422
Query: 589 NSCRMHKNTDVAEAMASQIFGLITET 614
MH A ++F L+ ET
Sbjct: 423 CGYSMHG----LGVEAIKMFNLMKET 444
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 175/374 (46%), Gaps = 49/374 (13%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + K VH ++ T ++ +L +Y R G DA F P
Sbjct: 150 FAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMP 209
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
K+ + W+ ++ +G E AL+++ +MR+ V+ + FTF V++A + S
Sbjct: 210 ---KNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIES--- 263
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
+ +H H L+ G +V + N L+ YAK G + S +LF+ + +N +SWN +
Sbjct: 264 -LDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIV 322
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
+ D + AL LF M ++ VT++S+L +
Sbjct: 323 SYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRA------------------------ 358
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
CA LAA +G +H K + V V NALI +Y K G +K A+ +F
Sbjct: 359 -----------CATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMF 407
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
++ ++ VSWNA+I Y+ GL EA+++F+ +++ + +P+ +++ V+ A ++
Sbjct: 408 DMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKE----TKCKPDELTFVGVLSACSNT 463
Query: 391 GRGEEALDLFRKMQ 404
GR +E F M+
Sbjct: 464 GRLDEGKQYFTSMK 477
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 153/325 (47%), Gaps = 17/325 (5%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +LQ I L K +H + G + F++ +++ YA+ G + + +FE
Sbjct: 251 FSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALS 310
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + WN+I+ V G E AL L+ M + V T+ ++RAC + +
Sbjct: 311 ---DRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALEL 367
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G VH + + +V + N LI MYAK G + D+ +FD + +++ +SWN +
Sbjct: 368 ----GLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIIC 423
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK-RGIE 269
G++++ A+++F M+ +P+ +T+ +LS+ + GRL+E F M++ GIE
Sbjct: 424 GYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIE 483
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV---KVA 326
E ++ + + ++ + + F+ FE V + AL+ H DV +++
Sbjct: 484 PCMEHYTCMVWLMG--RSGNLDQAVK-FIEDIPFEPSVMIWRALLGACVIHNDVELGRIS 540
Query: 327 QNLFSEIEEKNIVSWNALITSYAEA 351
E+E ++ S L YA A
Sbjct: 541 AQRVLELEPRDEASHVLLSNIYARA 565
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 212/767 (27%), Positives = 351/767 (45%), Gaps = 123/767 (16%)
Query: 12 FSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLS 71
F N + F TY + +L C + +++ K++H+ ++ + S L +++
Sbjct: 148 FHLKNSNSHFEPSTYTSLVLACANF-----RSLDYAKKIHDHVLKSNYQPSIILQNHMIN 202
Query: 72 IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+Y + G + DAR VF+T + + W S++ NG +A+ +Y++M + G D
Sbjct: 203 MYGKCGSMKDARKVFDTMQL---PNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPD 259
Query: 132 GFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM----------- 180
TF VI+AC G G+ +H HV++ F ++ N LI M
Sbjct: 260 QLTFGSVIKACYIAGDI----DLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHAS 315
Query: 181 --------------------YAKMGQMSDSFKLF-DKVRVKNYISWNMMF-SGFALNFDC 218
Y ++G ++ LF D +R Y +F S F+ C
Sbjct: 316 NVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSA---C 372
Query: 219 DGALELFKRMELEGL-------------------------------------EPNFVTWT 241
LEL ++ G+ P+ V+W
Sbjct: 373 SSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWN 432
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
+++++ A G E +D F M G+ + +L C + G+ IH +++K
Sbjct: 433 AIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKI 492
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
GF+ K I N+L+T Y + +A+ VF
Sbjct: 493 GFD-------------------------------KEITVCNSLLTMYTKCSHLHDALNVF 521
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
+ + N++SW+A++ A + E L+++M + +S+TI+ LL
Sbjct: 522 RDISR-------NANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGT 574
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
CAE +L +G ++H + ++ + ++ V NGL++MY KCG L+ VF+ + D+++W
Sbjct: 575 CAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSW 634
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
+S+I GY GLG AL F M G +P+ V ++ LSACSH GLV EG R++ M
Sbjct: 635 SSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMET 694
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
E I P EH++C+VDLL RAG L EA ++ ++ + W TLL +C+ H N D+AE
Sbjct: 695 EHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAE 754
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI 661
A I L + + ++L NI+A++G WE+ AK+R K G++KV GQSWIEVK K
Sbjct: 755 RGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKF 814
Query: 662 HMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKK 708
H+F S +S + +LEEL Q+ + G P + M KK
Sbjct: 815 HIFFSEDSSHPQRNLIYTMLEELWSQVLDDGYDPCQSCYIQNMYLKK 861
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/406 (21%), Positives = 183/406 (45%), Gaps = 65/406 (16%)
Query: 254 EETMDLFDM-MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
+E ++ FD ++ ++ CA+ + K IH V+K ++ + ++N
Sbjct: 140 KEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNH 199
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK------ 366
+I +YGK G +K A+ +F ++ N+VSW ++I+ Y++ G ++A+ ++ Q+ +
Sbjct: 200 MINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPD 259
Query: 367 ----------------LDGGSMERPNVI-SW--------SAVIGAFASNGRGEEALDLFR 401
+D G +VI SW +A+I + + G+ E A ++F
Sbjct: 260 QLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFT 319
Query: 402 KMQLAKVVANSVTISG--------------------------------LLSVCAESAALN 429
++ +++ I+G + S C+ L
Sbjct: 320 RIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELE 379
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
G+++HG V+ + +N+ L +MY K G L + F QI+ D+++WN++I+ +
Sbjct: 380 YGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFA 439
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
NG A+ F +MI G PD + ++++L C +N+GR+I +V+ + ++
Sbjct: 440 DNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVK-IGFDKEI 498
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
++ + + L +A ++ +++ N W +L++C K
Sbjct: 499 TVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKK 544
>gi|242059659|ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
gi|241930950|gb|EES04095.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
Length = 590
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 199/636 (31%), Positives = 308/636 (48%), Gaps = 90/636 (14%)
Query: 38 LQQCKTIHQLKQVHNQLIVTG---ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCK 94
L+ C++ Q H L+ +G A+ +L+I + G A VF P
Sbjct: 17 LRACRSASHAIQCHALLLTSGHLAASPLRLSNLLLLAIASVPGAAPLADAVFARLPEPAA 76
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
WN+ +R++ + G AL + +MR GV D +TFP V++AC R
Sbjct: 77 RDPFPWNTAIRLH-APGRPRAALLYFARMRSCGVRPDAYTFPAVLKACGCAPGCRA---- 131
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G +VH ++ G ++ VN LI Y ++ K+FD
Sbjct: 132 GLLVHAEAVRRGLGADLFTVNALISFYCRILDCISGRKVFD------------------- 172
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
E G+ + V+W S+++ + CG + +LFD M +R
Sbjct: 173 --------------EAGGVSRDLVSWNSMVAGYVGCGEMGLAQELFDEMPQRD------- 211
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV--AQNLFSE 332
F ALI YGK G V A+ LF +
Sbjct: 212 --------------------------------AFSWGALIDGYGKQGGAGVDRARELFDQ 239
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ E+++V WN++I YA G DEA +F + M NVISWS VI G
Sbjct: 240 MTERDLVCWNSMIDGYARHGRMDEARSLFEE--------MPERNVISWSIVIDGHVRCGE 291
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
+EAL+ F+ M + + V G +S CA+ AL GR +H ++ + + +++VQ
Sbjct: 292 AKEALEHFQSMLRCGIRPDRVAAVGAVSACAQLGALEQGRWLHSYLEKKKVLSDVVVQTA 351
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++MYMKCG ++ L+FE + ++ ++TWN MI G G +G G +A+ F M D
Sbjct: 352 LIDMYMKCGRMDLAMLIFESMPERSVVTWNVMIVGLGTHGYGLDAVMLFHRMEAERVAVD 411
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
++ +A+L+AC+HAGLV+EG IF M ++F I+P++EHY +VDLLGRAG L +A +
Sbjct: 412 DLSLLAMLTACTHAGLVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAI 471
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
+ MPMEP +WG+LL +CR H ++AE ++ L + +G Y+LLSNIYA G W
Sbjct: 472 ETMPMEPTPELWGSLLAACRSHSCVELAELSVERLANLGADDSGVYVLLSNIYADEGMWG 531
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
D ++R +G++K G+S IEV +IH F +G
Sbjct: 532 DVLRIRKLMSDEGMRKDIGRSVIEVDGEIHEFVNGG 567
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 166/404 (41%), Gaps = 71/404 (17%)
Query: 17 PSRPFSIITYNNSLLDC--------FDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFL 65
P RP + + Y + C F +L+ C + VH + + G A F
Sbjct: 91 PGRPRAALLYFARMRSCGVRPDAYTFPAVLKACGCAPGCRAGLLVHAEAVRRGLGADLFT 150
Query: 66 AARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
++S Y R R VF+ A + WNS++ V G A +L+ +M +
Sbjct: 151 VNALISFYCRILDCISGRKVFDEA-GGVSRDLVSWNSMVAGYVGCGEMGLAQELFDEMPQ 209
Query: 126 LGVLGDGFTFPLVIRACKFMGSF---RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
D F++ +I G R R F Q+ ++ N +I YA
Sbjct: 210 R----DAFSWGALIDGYGKQGGAGVDRARELFDQMTERDLV---------CWNSMIDGYA 256
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
+ G+M ++ LF+++ +N ISW+++ G + ALE F+ M G+ P+ V
Sbjct: 257 RHGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAKEALEHFQSMLRCGIRPDRVA--- 313
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
VGA +S CA L A G+ +H ++ K
Sbjct: 314 --------------------------AVGA------VSACAQLGALEQGRWLHSYLEKKK 341
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
V V+ ALI +Y K G + +A +F + E+++V+WN +I G +AV +F
Sbjct: 342 VLSDVVVQTALIDMYMKCGRMDLAMLIFESMPERSVVTWNVMIVGLGTHGYGLDAVMLFH 401
Query: 363 QLEKLDGGSMERPNV--ISWSAVIGAFASNGRGEEALDLFRKMQ 404
++E ER V +S A++ A G E L++F +M+
Sbjct: 402 RMEA------ERVAVDDLSLLAMLTACTHAGLVSEGLEIFHRMK 439
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/684 (28%), Positives = 349/684 (51%), Gaps = 89/684 (13%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAA--RVLSIYARFGRLFD 81
+T+ L C D + Q + + QVH + G + + FL +L Y RL
Sbjct: 142 VTFTTLLPGCNDAVPQ-----NAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDL 196
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
A +FE S+ +N+++ +GLY A+ L++KMR+ G FTF V++A
Sbjct: 197 ACVLFEEI---LDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKA 253
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
+ F + GQ +H + GF + + N+++ Y+K ++ ++ LF+++ +
Sbjct: 254 VVGLHDF----ALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELD 309
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
++S+N+ ++SS+++ + EE+++LF
Sbjct: 310 FVSYNV-----------------------------------VISSYSQAEQYEESLNLFR 334
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
M+ G + A +LS+ A+L++ +G+ +H I + + V N+L+ +Y
Sbjct: 335 EMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMY---- 390
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
A+ + DEA +F S+ + + +SW+
Sbjct: 391 ---------------------------AKCEMFDEAELIFK--------SLSQRSTVSWT 415
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
A+I + G L LF KM+ A + A+ T + +L A A+L +G+++H ++R
Sbjct: 416 ALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRS 475
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
+N+ +GL++MY KCG +++ VFE++ ++ ++WN++IS Y NG GE A+ F
Sbjct: 476 GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAF 535
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
+MI++G +PD V+ + VL ACSH G V +G F M + I P+ +HYACM+DLLGR
Sbjct: 536 TKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGR 595
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT-ETTGSYML 620
G EA ++ MP EP+ +W ++LN+CR++KN +AE A Q+F + +Y+
Sbjct: 596 NGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVS 655
Query: 621 LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEV 680
+SNIYAA+G+WE+ V+ + + +G+KKV SW+EV KIH+FSS + + + +
Sbjct: 656 MSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKK 715
Query: 681 LEELALQMENKGCVPDNDIILWEM 704
+ EL ++E +G PD ++ ++
Sbjct: 716 INELTTEIEREGYKPDTSSVVQDI 739
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 219/501 (43%), Gaps = 78/501 (15%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
V +++ GF + N + + GQ+S + K++D++ KN +S N M SG+ D
Sbjct: 31 VDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKMGD 90
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
A LF M + VTWT L+ +A +E LF M +
Sbjct: 91 LSSARHLFDAMP----DRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTT 146
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVF--VKNALICVYGKHGDVKVAQNLFSEIEE 335
+L C D + +H F +K GF+ +F V N L+ Y + + +A LF EI +
Sbjct: 147 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILD 206
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA--------- 386
K+ V++N LIT Y + GL EA+ +F ++ + S +P+ ++S V+ A
Sbjct: 207 KDSVTFNTLITGYEKDGLYTEAIHLFLKMRQ----SGHKPSDFTFSGVLKAVVGLHDFAL 262
Query: 387 --------------------------FASNGRGEEALDLFRKMQLAKVVANSVTISG--- 417
++ + R E +LF +M V+ +V IS
Sbjct: 263 GQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQ 322
Query: 418 ----------------------------LLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
+LS+ A ++L +GR++H + + + + V
Sbjct: 323 AEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHV 382
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
N L++MY KC +E L+F+ + ++ ++W ++ISGY GL L F +M A
Sbjct: 383 GNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANL 442
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
+ D F VL A + + G+++ ++R +E + + +VD+ + G +++A
Sbjct: 443 RADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDAV 501
Query: 570 DIVKNMPMEPNAYVWGTLLNS 590
+ + MP + NA W L+++
Sbjct: 502 QVFEEMP-DRNAVSWNALISA 521
>gi|356518834|ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Glycine max]
Length = 875
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 214/718 (29%), Positives = 359/718 (50%), Gaps = 91/718 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRL-FDARNVFETAPFDCKSSSLLWNSILRV 106
K VH +I +G + ++S+YA+ G + DA VF+ + + WN+++
Sbjct: 166 KCVHGYVIKSGFDQDTLGGNALVSMYAKCGLVSHDAYAVFDNIAY---KDVVSWNAMIAG 222
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF--GQIVHNHVLQ 164
N L E+A L+ M K + T ++ C SF ++ G+ +H++VLQ
Sbjct: 223 LAENRLVEDAFLLFSSMVKGPTRPNYATVANILPVC---ASFDKSVAYYCGRQIHSYVLQ 279
Query: 165 MG-FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALE 223
+V + N LI +Y K+GQM ++ LF + ++ ++WN +G+ N + AL
Sbjct: 280 WPELSADVSVCNALISLYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALH 339
Query: 224 LFKRM-ELEGLEPNFVTWTSLL------------------------------------SS 246
LF + LE L P+ VT S+L S
Sbjct: 340 LFGNLASLETLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSF 399
Query: 247 HARCGRLEETMDLFDM-------------------------------MRKRGIEVGAEAI 275
+A+CG EE F M M K I + I
Sbjct: 400 YAKCGYTEEAYHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSVTI 459
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGF---EDYVFVKNALICVYGKHGDVKVAQNLFSE 332
++ +CA L K IH + I+ G V NA++ Y K G+++ A +F
Sbjct: 460 LAIIRLCASLLRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQN 519
Query: 333 IEEK-NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+ EK N+V+ N+LI+ Y G +A +FS + + D + +W+ ++ +A N
Sbjct: 520 LSEKRNLVTCNSLISGYVGLGSHHDANMIFSGMSETD--------LTTWNLMVRVYAEND 571
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
E+AL L ++Q + ++VTI LL VC + A++++ + G+++R S K++ ++
Sbjct: 572 CPEQALGLCHELQARGMKPDTVTIMSLLPVCTQMASVHLLSQCQGYIIR-SCFKDLHLEA 630
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
LL+ Y KCG + + +F+ +KDL+ + +MI GY M+G+ E AL F M++ G +P
Sbjct: 631 ALLDAYAKCGIIGRAYKIFQLSAEKDLVMFTAMIGGYAMHGMSEEALWIFSHMLKLGIQP 690
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D + F ++LSACSHAG V+EG +IF + + ++P +E YAC+VDLL R G + EA +
Sbjct: 691 DHIIFTSILSACSHAGRVDEGLKIFYSIEKLHGMKPTVEQYACVVDLLARGGRISEAYSL 750
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
V ++P+E NA +WGTLL +C+ H ++ +A+Q+F + G+Y++LSN+YAA RW
Sbjct: 751 VTSLPIEANANLWGTLLGACKTHHEVELGRIVANQLFKIEANDIGNYIVLSNLYAADARW 810
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
+ +VR + K LKK AG SWIEV+R ++F +G+ + L+ L Q++
Sbjct: 811 DGVMEVRRMMRNKDLKKPAGCSWIEVERTNNIFVAGDCSHPQRSIIYSTLQTLDRQVK 868
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 221/505 (43%), Gaps = 96/505 (19%)
Query: 97 SLLWNSILRVNVSNGL--YENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
S++W+ L S L + + LK + + D ++++C S +
Sbjct: 11 SVIWSLCLEAKHSEALSLFHHCLKGHEAFKP-----DHTVLAAILKSC----SALLAPNL 61
Query: 155 GQIVHNHVLQMGFQGNVHIVNE-LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H +V++ G G+ H+ N+ L+ MYAK G + + KLFD++ + + WN++ SGF+
Sbjct: 62 GRTLHGYVVKQG-HGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFS 120
Query: 214 LNFDCDGALELFKRMELEGLE--PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+ CD + RM E PN VT
Sbjct: 121 GSNKCDADVMRVFRMMHSSREALPNSVT-------------------------------- 148
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
+A VL VCA L GK +HG+VIK GF+
Sbjct: 149 ---VATVLPVCARLGDLDAGKCVHGYVIKSGFD--------------------------- 178
Query: 332 EIEEKNIVSWNALITSYAEAGLCD-EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
++ + NAL++ YA+ GL +A VF + D V+SW+A+I A N
Sbjct: 179 ----QDTLGGNALVSMYAKCGLVSHDAYAVFDNIAYKD--------VVSWNAMIAGLAEN 226
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCA---ESAALNIGREIHGHVVR-VSMNKN 446
E+A LF M N T++ +L VCA +S A GR+IH +V++ ++ +
Sbjct: 227 RLVEDAFLLFSSMVKGPTRPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSAD 286
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+ V N L+++Y+K G + E +F ++ +DL+TWN+ I+GY NG AL F +
Sbjct: 287 VSVCNALISLYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLAS 346
Query: 507 -AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
PD V V++L AC+ + G++I + R + +V + G
Sbjct: 347 LETLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYT 406
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNS 590
+EA + M+ + W ++ ++
Sbjct: 407 EEAYHTFSMISMK-DLISWNSIFDA 430
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 168/366 (45%), Gaps = 51/366 (13%)
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRK--RGIEVGAEAIAVVLSVCADLAADHMGKV 293
+F TW S++ S + E + LF K + +A +L C+ L A ++G+
Sbjct: 5 DFKTWGSVIWSLCLEAKHSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPNLGRT 64
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
+HG+V+K G HG V L+ YA+ G+
Sbjct: 65 LHGYVVKQG-----------------HGSCHVTNK--------------GLLNMYAKCGM 93
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA-SNGRGEEALDLFRKMQLAK-VVAN 411
E +++F QL D + W+ V+ F+ SN + + +FR M ++ + N
Sbjct: 94 LVECLKLFDQLSHCDP--------VVWNIVLSGFSGSNKCDADVMRVFRMMHSSREALPN 145
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL-EEGHLVF 470
SVT++ +L VCA L+ G+ +HG+V++ +++ L N L++MY KCG + + + VF
Sbjct: 146 SVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQDTLGGNALVSMYAKCGLVSHDAYAVF 205
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS---HAG 527
+ I KD+++WN+MI+G N L E+A F M++ +P+ +L C+ +
Sbjct: 206 DNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSMVKGPTRPNYATVANILPVCASFDKSV 265
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP----NAYV 583
GR+I +++ + + ++ L + G ++EA + M NA++
Sbjct: 266 AYYCGRQIHSYVLQWPELSADVSVCNALISLYLKVGQMREAEALFWTMDARDLVTWNAFI 325
Query: 584 WGTLLN 589
G N
Sbjct: 326 AGYTSN 331
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 199/643 (30%), Positives = 326/643 (50%), Gaps = 82/643 (12%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H ++ + A ++A ++++YA+ GR+ DA VFE+ C+ + WN++L V
Sbjct: 270 IHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFES--MLCRDY-VSWNTLLSGLVQ 326
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
N LY +AL + M+ G D + +I A G+ G+ VH + ++ G
Sbjct: 327 NELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLK----GKEVHAYAIRNGLDS 382
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
N+ I N L+ MYAK + + G A F+C
Sbjct: 383 NMQIGNTLVDMYAKCCCVK--------------------YMGHA--FECMH--------- 411
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
E + ++WT++++ +A+ E ++LF ++ +G++V I VL C+ L + +
Sbjct: 412 ----EKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRN 467
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+ IHG+V K D + ++NA++ VYG
Sbjct: 468 FIREIHGYVFKRDLAD-IMLQNAIVNVYG------------------------------- 495
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
E G D A F + D ++SW+++I NG EAL+LF ++ +
Sbjct: 496 EVGHIDYARRAFESIRSKD--------IVSWTSMITCCVHNGLPVEALELFYSLKQTNIQ 547
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
+S+ I LS A ++L G+EIHG ++R + + L++MY CG +E +
Sbjct: 548 PDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKM 607
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F ++++DLI W SMI+ GM+G G A+A F++M + PD + F+A+L ACSH+GL+
Sbjct: 608 FHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLM 667
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
EG+R F++M +++EP EHYACMVDLL R+ L+EA V+NMP++P++ +W LL
Sbjct: 668 VEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLG 727
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
+C +H N ++ E A ++ TE +G Y L+SNI+AA GRW D +VR+ K GLKK
Sbjct: 728 ACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKN 787
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
G SWIEV KIH F + + ++ L + +E KG
Sbjct: 788 PGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLEKKG 830
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 178/701 (25%), Positives = 302/701 (43%), Gaps = 113/701 (16%)
Query: 37 LLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LL C K + Q +Q+H L+ ++ SAFLA +++ +Y + G L DA VF+
Sbjct: 52 LLDLCVAAKALPQGQQLHALLL--KSHLSAFLATKLVLMYGKCGSLRDAVKVFDEMS--- 106
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + WN+++ VS+G Y A++LY MR LGV D TFP V++AC +G R
Sbjct: 107 ERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRL--- 163
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G +H ++ G+ V + N LI MY K G + + LFD +
Sbjct: 164 -GAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIM--------------- 207
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
ME E + V+W S++S+H G E + LF M++ G+
Sbjct: 208 --------------MEKE----DTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTY 249
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
L D + +G IHG V+K DV VA
Sbjct: 250 TFVAALQGVEDPSFVKLGMGIHGAVLKSN----------------HFADVYVA------- 286
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
NALI YA+ G ++A VF SM + +SW+ ++ N
Sbjct: 287 --------NALIAMYAKCGRMEDAGRVFE--------SMLCRDYVSWNTLLSGLVQNELY 330
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
+AL+ FR MQ + + V++ L++ S L G+E+H + +R ++ N+ + N L
Sbjct: 331 SDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTL 390
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY KC C++ FE + +KDLI+W ++I+GY N A+ F ++ G D
Sbjct: 391 VDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDP 450
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
+ +VL ACS N R I + + + +++ +V++ G G + A +
Sbjct: 451 MMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQN--AIVNVYGEVGHIDYARRAFE 508
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
++ + W +++ C +H V EA+ ++F + +T ++ I A S
Sbjct: 509 SI-RSKDIVSWTSMITCC-VHNGLPV-EAL--ELFYSLKQTNIQPDSIAIISALS----- 558
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
A +S+ KG K++ G +++ + S D+ C +E +
Sbjct: 559 -ATANLSSLKKG-KEIHG---FLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHS--- 610
Query: 694 VPDNDIILWEMM---------GKKNVKRIQRIRADNIKSKH 725
V D+ILW M G K + +++ N+ H
Sbjct: 611 VKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDH 651
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/650 (29%), Positives = 328/650 (50%), Gaps = 81/650 (12%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
Q+H + T + L +YA+ R+ DAR VF T P + S N+++
Sbjct: 292 QLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSH---NALIVGYA 348
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
AL+++ ++K + D + + AC + + G +H ++ G
Sbjct: 349 RQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLE----GIQLHGLAVKCGLD 404
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
N+ + N ++ MYAK G + ++ +FD + +K+ +S
Sbjct: 405 FNICVANTILDMYAKCGALMEACLIFDDMEIKDAVS------------------------ 440
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
W +++++H + +EET+ LF M + +E V+ CA A
Sbjct: 441 -----------WNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKAL 489
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+ G +HG VIK G FV +A+I +Y K
Sbjct: 490 NYGMEVHGRVIKSGMGLDWFVGSAIIDMYCK----------------------------- 520
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
G+ EA ++ +LE ER V SW+++I F+S +GE AL F +M V
Sbjct: 521 --CGMLVEAEKIHERLE-------ERTTV-SWNSIISGFSSEKQGENALSYFSRMLQVGV 570
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+ ++ T + +L +CA A + +G++IHG ++++ ++ ++ + + +++MY KCG +++ +
Sbjct: 571 IPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRI 630
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
+FE+ K+D +TW++MI Y +GLGE+A+ FEEM KP+ F++VL AC+H G
Sbjct: 631 MFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGF 690
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
V++G F M + ++PQMEHY+CMVDLLGR+G + EA +++++MP E + +W TLL
Sbjct: 691 VDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLL 750
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
CR+ N +VAE A+ + L + + +Y+LLSN+YA +G W + AK+R K LKK
Sbjct: 751 GICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKK 810
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
G SWI+V+ ++H F G+ + + + L +M+ G VP+ D
Sbjct: 811 EPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEID 860
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 180/772 (23%), Positives = 331/772 (42%), Gaps = 152/772 (19%)
Query: 5 LLHQPHQFSPSNPSRPFSIITYNNSLLD-----CFDHLLQQC---KTIHQLKQVHNQLIV 56
+LH P S + P P++I + +++ ++ F H+ Q+C K I+ KQ H Q+ V
Sbjct: 9 VLHLPILNSQTTP--PYAIHSISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITV 66
Query: 57 TGANASAFLAARVLSIYARFGRLFDARNVFETAP-------------------------- 90
TG + F++ +L Y + L A NVF+ P
Sbjct: 67 TGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFL 126
Query: 91 FDC--KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
FD + + WNS+L + NG + +++++ KMR L + D TF +V++AC + +
Sbjct: 127 FDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDY 186
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
G VH +QMGF +V L+ MY+ ++ +F +F
Sbjct: 187 ----GLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIF-------------- 228
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
E E N V W+++++ + R R E + L+ +M G+
Sbjct: 229 ---------------------CEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGM 267
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
V A CA L+A +G +H + +K F
Sbjct: 268 GVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFG------------------------ 303
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
NIV A + YA+ +A +VF+ + P S +A+I +A
Sbjct: 304 ------YDNIVG-TATLDMYAKCDRMVDARKVFN--------TFPNPTRQSHNALIVGYA 348
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
+ EAL++FR +Q + + + +++SG L+ C+ G ++HG V+ ++ NI
Sbjct: 349 RQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNIC 408
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
V N +L+MY KCG L E L+F+ +E KD ++WN++I+ + N E LA F M+ +
Sbjct: 409 VANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRST 468
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY--ACMVDLLGRAGLLQ 566
+PD F +V+ AC+ +N G + +++ ++ + + ++D+ + G+L
Sbjct: 469 MEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGM---GLDWFVGSAIIDMYCKCGMLV 525
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF--GLITETTGSYMLLSNI 624
EA I + + E W ++++ K + A + S++ G+I + +Y + +I
Sbjct: 526 EAEKIHERLE-ERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNF-TYATVLDI 583
Query: 625 YAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
A + A V + K++ GQ +K ++H S D+ + C +++
Sbjct: 584 CA------NLATVELG------KQIHGQI---LKLQLHSDVYIASTIVDMYSKCGNMQDS 628
Query: 685 ALQMENKGCVPDNDIILWEMM---------GKKNVKRIQRIRADNIKSKHRI 727
+ E P D + W M G+ +K + ++ N+K H I
Sbjct: 629 RIMFEK---APKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTI 677
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 323 bits (828), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 176/542 (32%), Positives = 290/542 (53%), Gaps = 37/542 (6%)
Query: 159 HNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
H +++ + ++ +++ + G+ + + ++F V N N M +A N
Sbjct: 30 HGLAVRLCLSQSSYVATQIVHVCNGHGRAAHAARVFAHVPAPNLHLHNAMIKAYAQNHLH 89
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE-AIAV 277
A+E++ RM RC L D G VG
Sbjct: 90 RDAVEVYVRM-------------------LRC--------LPDPSSSGGFSVGDRFTYPF 122
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
+L C LAA +G+ +H V + G E + V+N+LI +Y + GD+ +A+ +F + EK+
Sbjct: 123 LLKACGGLAASQLGRQVHAHVARSGCESHAIVQNSLIEMYTRCGDLSLARKVFDGMREKD 182
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
VSWN LI+++A G +A E+F SM V+SW+A++ + + G A+
Sbjct: 183 AVSWNTLISAHARMGQMRKARELFH--------SMPDKTVVSWTALVSGYTAVGDFAGAV 234
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
++FR+MQ+ + V+I +L CA+ AL +GR I+ + + M I + N L+ MY
Sbjct: 235 EVFRQMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMY 294
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG-FKPDGVAF 516
KCGC+EE +F + +KD+I+W++ I G +G A+ FE M G P+G+ F
Sbjct: 295 AKCGCIEEALQLFHGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDREGRVMPNGITF 354
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
V +LSACSHAGL++EG R FD M E+ +EP +EHY C+VDLLGR+G +Q A D + MP
Sbjct: 355 VGLLSACSHAGLLDEGLRYFDRMKEEYGVEPSVEHYGCVVDLLGRSGRIQRALDTIGGMP 414
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAK 636
+ P+ +WG+LL++CR H + D A A ++ L E G+ ++L+N+YAA+GRW + A
Sbjct: 415 IPPDGKIWGSLLSACRSHSDVDTAVVAAERLVELEPEDVGNLVMLANVYAAAGRWGNVAS 474
Query: 637 VRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
R +++ +K G S IEV + F +G L +L + +++ LA Q+ + + D
Sbjct: 475 TRKEIRSRSTRKTPGCSMIEVDNVVREFVAGEDLGPELGGIAAIIDILASQLADDEELVD 534
Query: 697 ND 698
+D
Sbjct: 535 SD 536
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 197/391 (50%), Gaps = 23/391 (5%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
L+ C T L + H + + S+++A +++ + GR A VF P +
Sbjct: 17 LRACATFRDLLRAHGLAVRLCLSQSSYVATQIVHVCNGHGRAAHAARVFAHVP---APNL 73
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKL---------GVLGDGFTFPLVIRACKFMGSF 148
L N++++ N L+ +A+++YV+M + +GD FT+P +++AC + +
Sbjct: 74 HLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVGDRFTYPFLLKACGGLAAS 133
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
+ G+ VH HV + G + + + N LI MY + G +S + K+FD +R K+ +SWN +
Sbjct: 134 QL----GRQVHAHVARSGCESHAIVQNSLIEMYTRCGDLSLARKVFDGMREKDAVSWNTL 189
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
S A A ELF M + V+WT+L+S + G +++F M+ G
Sbjct: 190 ISAHARMGQMRKARELFHSMP----DKTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGF 245
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
E +I VL CA L A +G+ I+ + K G +++ NAL+ +Y K G ++ A
Sbjct: 246 EPDDVSIVAVLPACAQLGALELGRWIYAYCNKHGMLGKIYICNALMEMYAKCGCIEEALQ 305
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
LF + EK+++SW+ I A G EAV++F +++ +G M PN I++ ++ A +
Sbjct: 306 LFHGMSEKDVISWSTAIGGLAAHGRAREAVKLFEVMDR-EGRVM--PNGITFVGLLSACS 362
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
G +E L F +M+ V SV G +
Sbjct: 363 HAGLLDEGLRYFDRMKEEYGVEPSVEHYGCV 393
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 186/602 (30%), Positives = 311/602 (51%), Gaps = 62/602 (10%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSF--KLFDKVRVKNYISWNMMFSGFALN 215
+H HVL+ G + +I+ +LI K+G D + ++ + V+ +N W + G+ +
Sbjct: 69 IHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEPVQFRNPFLWTAVIRGYTIE 128
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
G+ +E + ++ MRK I +
Sbjct: 129 -----------------------------------GKFDEAIAMYGCMRKEEITPVSFTF 153
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
+ +L C + ++G+ H + +V+V N +I +Y K G + A+ +F E+ E
Sbjct: 154 SALLKACGSMGDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPE 213
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
++++SW LI +YA G + A ++F L D +++W+A++ FA N + +E
Sbjct: 214 RDVISWTELIAAYARVGNMESAADLFESLPTKD--------MVAWTAMVTGFAQNAKPQE 265
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAE-SAALNIGREIH-GHVVRVSMNKNILVQNGL 453
AL+ F +M+ + + A+ VT++G +S CA+ A+ R + S + ++++ + L
Sbjct: 266 ALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSAL 325
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI-EAGFKPD 512
++MY KCG +EE VF + K++ +++SMI G +G + AL F M+ + KP+
Sbjct: 326 IDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPN 385
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
V FV L+ACSH+GLV++GR++F M + F +EP +HY CMVDLLGRAG LQEA +++
Sbjct: 386 TVTFVGALTACSHSGLVDQGRQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELI 445
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
K M +EP+ VWG LL +CR+H N D+AE A +F L + G+Y+LLSN+Y+++G W
Sbjct: 446 KTMSVEPHGGVWGALLGACRIHNNPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWG 505
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKR-KIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
VR K KGLKK SW+ K ++H F GN K + + LEEL ++
Sbjct: 506 GVLSVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSKKIQDKLEELVERLTAL 565
Query: 692 GCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRSTNGQLM 751
G PD + +++ +DN K I L L LL + R ++M
Sbjct: 566 GYQPDLSSVPYDV-------------SDNAKRLILIQHTEKLALAFSLLTTNRDYTIKIM 612
Query: 752 KN 753
KN
Sbjct: 613 KN 614
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 181/421 (42%), Gaps = 73/421 (17%)
Query: 15 SNPSRPFSIITYNNSLL-DCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIY 73
+N S FS I++ LL L C ++Q+KQ+H ++ G + S ++ +++
Sbjct: 33 NNNSSTFSEISHQRELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTL 92
Query: 74 ARFGRLFDA--RNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGD 131
+ G D R V E F + LW +++R G ++ A+ +Y MRK +
Sbjct: 93 TKLGVPMDPYPRRVIEPVQF---RNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPV 149
Query: 132 GFTFPLVIRACKFMG-----------SFRFR-FSF--------------GQIV-HNHVLQ 164
FTF +++AC MG +FR R F F G IV V
Sbjct: 150 SFTFSALLKACGSMGDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFD 209
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
+ +V ELI YA++G M + LF+ + K+ ++W M +GFA N ALE
Sbjct: 210 EMPERDVISWTELIAAYARVGNMESAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEY 269
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
F RME G+ + VT +A +S CA
Sbjct: 270 FDRMEKSGIRADEVT-----------------------------------VAGYISACAQ 294
Query: 285 LAADHMGKVIHGFVIKGGF--EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
L A K G+ D+V + +ALI +Y K G+V+ A N+F + KN+ S++
Sbjct: 295 LGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYS 354
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
++I A G EA+++F + + +PN +++ + A + +G ++ +F
Sbjct: 355 SMILGLATHGRAQEALDLFHYMVT---QTAIKPNTVTFVGALTACSHSGLVDQGRQVFAS 411
Query: 403 M 403
M
Sbjct: 412 M 412
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 8/178 (4%)
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL--VFEQ 472
+S L+S + LN ++IHGHV+R ++++ + L+ K G + + V E
Sbjct: 50 VSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEP 109
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
++ ++ W ++I GY + G + A+A + M + P F A+L AC G +N G
Sbjct: 110 VQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLG 169
Query: 533 RRIFDMMVREFRIEPQMEHYA--CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
R+ + FR+ Y M+D+ + G + A + MP E + W L+
Sbjct: 170 RQFH---AQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMP-ERDVISWTELI 223
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 181/526 (34%), Positives = 283/526 (53%), Gaps = 69/526 (13%)
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN 236
L+G+ +M ++ +LFD++ + S+N+M S + N + + A F RM + +
Sbjct: 99 LVGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNGNFEKAQSFFNRMPFK----D 154
Query: 237 FVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
+W ++++ +AR G +E+ LF MM K +
Sbjct: 155 AASWNTMITGYARRGEMEKARVLFYSMMEKNEVSW------------------------- 189
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
NA+I Y + GD++ A + F + +V+W A+IT Y +A +
Sbjct: 190 ---------------NAMISGYIECGDLEKAAHFFKAAPFRGVVAWTAMITGYMKAKKVE 234
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
A +F + + N+++W+A+I + N R E+ L LFR M + NS +
Sbjct: 235 LAEAMFKDM-------TVKKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGL 287
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
S L C+E +AL +GR+IH V MY KCG L + +FE ++K
Sbjct: 288 SSALLGCSELSALCLGRQIHQIV-----------------MYCKCGELGDAWKLFEAMKK 330
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
KD++ WN+MISGY +G E AL F EM ++ KPD + FVAVL AC+HAGLV+ G
Sbjct: 331 KDVVAWNAMISGYAQHGNAEKALCLFHEMRDSKTKPDWITFVAVLLACNHAGLVDIGMTY 390
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
FD MVR++R+EP+ +HY CMVDLLGRAG ++EA ++++MP P+A V+GTLL +CR+HK
Sbjct: 391 FDSMVRDYRVEPRPDHYTCMVDLLGRAGKVEEALKLIRSMPFRPHAAVFGTLLGACRVHK 450
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
N ++AE A ++ L Y+ L+NIYA+ WED A+VR K + KV G SWI
Sbjct: 451 NVELAEFAAEKLLELDPRNAAGYVQLANIYASKNLWEDVARVRKRMKESNVVKVPGYSWI 510
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
E++ KIH F S + + +L ++ + L+EL +M+ G P+ + L
Sbjct: 511 EIRNKIHHFRSSDRIHPELDSIHKKLKELERKMKLAGYKPELEFAL 556
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 153/363 (42%), Gaps = 59/363 (16%)
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
R +E +AI V + + ++ V ++ K ED +F N +I + GD+
Sbjct: 21 RSVE-NPDAILVGSCLSSTFSSPEPSLVRSDYLTKPSDEDQIFPLNKIIATRVRSGDIDG 79
Query: 326 AQNLFSEIEEKNIVSWNALITSYA-EAGLCDEAVEVFSQLEKLD-------------GGS 371
A ++F + KN VSWN+L+ + + EA ++F ++ + D G+
Sbjct: 80 ALSVFHGMRAKNTVSWNSLLVGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNGN 139
Query: 372 MERP----------NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
E+ + SW+ +I +A G E+A LF M V+ + ISG +
Sbjct: 140 FEKAQSFFNRMPFKDAASWNTMITGYARRGEMEKARVLFYSMMEKNEVSWNAMISGYIE- 198
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE-KKDLIT 480
C + E H + + + ++ ++ YMK +E +F+ + KK+L+T
Sbjct: 199 CGD-------LEKAAHFFKAAPFRGVVAWTAMITGYMKAKKVELAEAMFKDMTVKKNLVT 251
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WN+MISGY N E+ L F M+E G +P+ + L CS + GR+I +++
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALCLGRQIHQIVM 311
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEA---SDIVKNMPMEPNAYVWGTLLNSCRMHKNT 597
C LG A L EA D+V W +++ H N
Sbjct: 312 ------------YCKCGELGDAWKLFEAMKKKDVV----------AWNAMISGYAQHGNA 349
Query: 598 DVA 600
+ A
Sbjct: 350 EKA 352
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 112/240 (46%), Gaps = 49/240 (20%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG-- 232
N +I YA+ G+M + LF + KN +SWN M SG+ D + A FK G
Sbjct: 159 NTMITGYARRGEMEKARVLFYSMMEKNEVSWNAMISGYIECGDLEKAAHFFKAAPFRGVV 218
Query: 233 --------------------------LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
++ N VTW +++S + R E+ + LF M +
Sbjct: 219 AWTAMITGYMKAKKVELAEAMFKDMTVKKNLVTWNAMISGYVENSRPEDGLKLFRAMLEE 278
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
GI + ++ L C++L+A +G+ IH V+ Y K G++ A
Sbjct: 279 GIRPNSSGLSSALLGCSELSALCLGRQIHQIVM-----------------YCKCGELGDA 321
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
LF +++K++V+WNA+I+ YA+ G ++A+ +F ++ S +P+ I++ AV+ A
Sbjct: 322 WKLFEAMKKKDVVAWNAMISGYAQHGNAEKALCLFHEMR----DSKTKPDWITFVAVLLA 377
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 141/327 (43%), Gaps = 40/327 (12%)
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K + + WN+++ V N E+ LKL+ M + G+ + + C + +
Sbjct: 246 KKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL----C 301
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H I MY K G++ D++KLF+ ++ K+ ++WN M SG+A
Sbjct: 302 LGRQIHQ-----------------IVMYCKCGELGDAWKLFEAMKKKDVVAWNAMISGYA 344
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGA 272
+ + + AL LF M +P+++T+ ++L + G ++ M FD M+R +E
Sbjct: 345 QHGNAEKALCLFHEMRDSKTKPDWITFVAVLLACNHAGLVDIGMTYFDSMVRDYRVEPRP 404
Query: 273 EAIAVVLSVCADLAADHMGKVIHG--FVIKGGFEDYVFVKNALICVYGKHGDVKVAQ--- 327
+ ++ + GKV + F + V L+ H +V++A+
Sbjct: 405 DHYTCMVDLLG-----RAGKVEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAA 459
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
E++ +N + L YA L ++ V ++++ + + + I I F
Sbjct: 460 EKLLELDPRNAAGYVQLANIYASKNLWEDVARVRKRMKESNVVKVPGYSWIEIRNKIHHF 519
Query: 388 ASNGRGEEALD--------LFRKMQLA 406
S+ R LD L RKM+LA
Sbjct: 520 RSSDRIHPELDSIHKKLKELERKMKLA 546
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 300/534 (56%), Gaps = 28/534 (5%)
Query: 174 VNELIGMYAKM---GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
+N+++ ++A++ G D F +F+ +R + C A++ R+
Sbjct: 62 INQVLPIHAQLIRNGHSQDPFMVFELLRSCS---------------KCH-AIDYASRIFQ 105
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
PN +T+L+ G + + L+ M I +A +L C A
Sbjct: 106 YTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALRE 165
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
G+ +H +K G V+ ++ +YGK G++ A+ +F E+ E ++V+ +I+SY++
Sbjct: 166 GREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSD 224
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
GL +EA VFS++ + D + W+A+I F N AL+ FR MQ V
Sbjct: 225 QGLVEEAGAVFSRVRRKD--------TVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRP 276
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
N TI +LS C++ AL IGR +H ++ + + N+ V N L+NMY +CG ++E VF
Sbjct: 277 NEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVF 336
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
++++ +D+IT+N+MISG MNG A+ F MI +P V FV VL+ACSH GLV+
Sbjct: 337 DEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVD 396
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
G +IF M R++ +EPQ+EHY CMVDLLGR G L+EA D+++ M M P+ + GTLL++
Sbjct: 397 FGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSA 456
Query: 591 CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVA 650
C+MHKN ++ E +A + +G+Y+LLS++YA+SG+W++AA+VR K G++K
Sbjct: 457 CKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEP 516
Query: 651 GQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G S IEV +IH F G+ + + E LEEL + +G P+ +++L ++
Sbjct: 517 GCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDI 570
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 219/459 (47%), Gaps = 53/459 (11%)
Query: 8 QPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAA 67
+PH S SNP S+ + + + LLQ+ K I+Q+ +H QLI G + F+
Sbjct: 32 KPHPNSNSNPK---SLKSLDQKQIIS---LLQRSKHINQVLPIHAQLIRNGHSQDPFMVF 85
Query: 68 RVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG 127
+L ++ + A +F+ + + L+ +++ VS+G Y +A++LY +M
Sbjct: 86 ELLRSCSKCHAIDYASRIFQ---YTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDS 142
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
+L D + +++AC + R G+ VH+ L++G N + ++ +Y K G++
Sbjct: 143 ILPDNYLMASILKACGSQLALRE----GREVHSRALKLGLSSNRLVRLRIMELYGKCGEL 198
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
D+ ++F+++ ++ ++ +M S ++ + A +F R+ + + V WT+++
Sbjct: 199 GDARRVFEEM-PEDVVASTVMISSYSDQGLVEEAGAVFSRVRRK----DTVCWTAMIDGF 253
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
R + ++ F M+ + I VLS C+ L A +G+ +H ++ K E +
Sbjct: 254 VRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNL 313
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF-----S 362
FV NALI +Y + G + AQ +F E+++++++++N +I+ + G +A+E+F
Sbjct: 314 FVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGR 373
Query: 363 QLEKLD------------GG----------SMER-----PNVISWSAVIGAFASNGRGEE 395
+L + GG SM R P + + ++ GR EE
Sbjct: 374 RLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEE 433
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
A DL R M K+ + + + LLS C L +G ++
Sbjct: 434 AYDLIRTM---KMTPDHIMLGTLLSACKMHKNLELGEQV 469
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 70/159 (44%), Gaps = 1/159 (0%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
++S+ S +N IH ++R +++ + LL KC ++ +F+ +
Sbjct: 52 IISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPN 111
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+ + ++I G+ +G +A+ + M+ PD ++L AC + EGR +
Sbjct: 112 VYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHS 171
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
++ ++ M +L G+ G L +A + + MP
Sbjct: 172 RALKLGLSSNRLVRLRIM-ELYGKCGELGDARRVFEEMP 209
>gi|413924390|gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
Length = 496
Score = 323 bits (827), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 178/464 (38%), Positives = 252/464 (54%), Gaps = 15/464 (3%)
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV--VLSVCADLA----ADH 289
+ V+WTS +S AR G L M + + VLS CAD A
Sbjct: 31 DVVSWTSTISRAARQGDLHAAAASLCAMVSSPAAPAPNDVTLLTVLSACADSPSSPLASP 90
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+ +H +K F ++ + L Y +A LF + +++V++N +I+
Sbjct: 91 LALTLHARALKL-FPSHLLLSTCLARFYLASRLPHLALQLFDSMPVRSVVTYNTMISGLM 149
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
GL D A EVF DG M P+ +SW+A+I F NGR +EA+D FR M L V
Sbjct: 150 RNGLVDAAFEVF------DG--MPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDGVE 201
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
+ +T+ ++S CAE AL +G +H V+R + +N+ V N L++MY +CG + V
Sbjct: 202 TDYITLVAVVSACAEVGALGLGMWVHRLVLRQRLERNVRVANSLIDMYARCGQVNLAAQV 261
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F I K+ +++WNSMI G+ NG +A+ FEEM GFKPD V VL+ACSHAGL
Sbjct: 262 FRSIRKRTVVSWNSMIVGFAANGRCTDAIELFEEMRRQGFKPDAVTLTGVLTACSHAGLT 321
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
G R +D+M E+ + +MEHY C+VDLLGRAG L EA +V+ MPM PN V G LL
Sbjct: 322 EHGLRYYDLMTTEYGVAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLA 381
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
CR H N D+AE M +F L + +Y+LLSNIYAA G+W+ A KVR K +G+KK
Sbjct: 382 GCRTHGNLDMAEQMMQHLFELDPQGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKKR 441
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
G S +E+ +H F SG+ + ++L L +M GC
Sbjct: 442 PGHSTVEIDGDVHEFVSGDQSHPLAGEIGQMLGLLWHEMTRYGC 485
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 169/387 (43%), Gaps = 22/387 (5%)
Query: 86 FETAPFDCKSSSLLWNS-ILRVNVSNGLYENALKLYVKMRKLGVLG-DGFTFPLVIRACK 143
F+ AP + W S I R L+ A L + + T V+ AC
Sbjct: 21 FQRAPRHAPRDVVSWTSTISRAARQGDLHAAAASLCAMVSSPAAPAPNDVTLLTVLSACA 80
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
S +H L++ F ++ + L Y + +LFD + V++ +
Sbjct: 81 DSPSSPLASPLALTLHARALKL-FPSHLLLSTCLARFYLASRLPHLALQLFDSMPVRSVV 139
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
++N M SG N D A E+F M P+ V+WT+L+ + GR +E +D F M
Sbjct: 140 TYNTMISGLMRNGLVDAAFEVFDGMP----GPDKVSWTALIDGFVKNGRHDEAIDCFRAM 195
Query: 264 RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
G+E + V+S CA++ A +G +H V++ E V V N+LI +Y + G V
Sbjct: 196 LLDGVETDYITLVAVVSACAEVGALGLGMWVHRLVLRQRLERNVRVANSLIDMYARCGQV 255
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
+A +F I ++ +VSWN++I +A G C +A+E+F ++ + +P+ ++ + V
Sbjct: 256 NLAAQVFRSIRKRTVVSWNSMIVGFAANGRCTDAIELFEEMRR----QGFKPDAVTLTGV 311
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG-HVVR-V 441
+ A + G E L + M VA + G C GR HVV +
Sbjct: 312 LTACSHAGLTEHGLRYYDLMTTEYGVAARMEHYG----CVVDLLGRAGRLDEAMHVVETM 367
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHL 468
M N +V LL GC G+L
Sbjct: 368 PMRPNEVVLGALL-----AGCRTHGNL 389
>gi|347954490|gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]
Length = 435
Score = 323 bits (827), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 177/463 (38%), Positives = 266/463 (57%), Gaps = 43/463 (9%)
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD 284
F M L G+EPN +T+ +LLS DL G+EA
Sbjct: 2 FSGMRLAGVEPNHITFIALLSGWG---------DLLS---------GSEA---------- 33
Query: 285 LAADHMGKVIHGFVIKGGFED-YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNA 343
+G ++HG+ K G + +V V A++ +Y K G + A+ +F +EEKN V+WN
Sbjct: 34 -----LGDLLHGYACKLGLDRAHVMVGTAILGMYSKRGRFRKARLVFDYMEEKNSVTWNT 88
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+I Y G D+AV++F ++ + D +ISW+A+I F G EEAL FR+M
Sbjct: 89 MIDGYMRNGQVDDAVKLFDEMPERD--------LISWTAMINGFVKKGFHEEALAWFREM 140
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
Q++ V + V I L+ C AL+ G IH +VV N+ V N L+++Y +CGC+
Sbjct: 141 QISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVVSQDFKNNVRVSNSLIDLYCRCGCV 200
Query: 464 EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
E VF+++EK+ +++WNS+I G+ NG +L F +M E GFKP+ V F L+AC
Sbjct: 201 EFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLVYFRKMQEEGFKPNAVTFTGALAAC 260
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
+H GLV EG R F M R++RI P++EHY C+VDL RAG L++A +V++MPM+PN V
Sbjct: 261 NHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVV 320
Query: 584 WGTLLNSCRMH-KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAK 642
G+LL +CR NT +AE + + L ++ +Y++LSN+YAA G+WE A+K+R K
Sbjct: 321 IGSLLAACRTQGNNTVLAERVMKHLSDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMK 380
Query: 643 TKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
GLKK G S IE+ H+F +G++ + N+ EVLE L+
Sbjct: 381 GLGLKKEPGFSSIEIDDCTHVFMAGDNTHVETTNIREVLELLS 423
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 139/253 (54%), Gaps = 9/253 (3%)
Query: 153 SFGQIVHNHVLQMGF-QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
+ G ++H + ++G + +V + ++GMY+K G+ + +FD + KN ++WN M G
Sbjct: 33 ALGDLLHGYACKLGLDRAHVMVGTAILGMYSKRGRFRKARLVFDYMEEKNSVTWNTMIDG 92
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+ N D A++LF M E + ++WT++++ + G EE + F M+ G++
Sbjct: 93 YMRNGQVDDAVKLFDEMP----ERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPD 148
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
AI L+ C +L A G IH +V+ F++ V V N+LI +Y + G V+ A+ +F
Sbjct: 149 YVAIIAALAACTNLGALSFGLWIHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFD 208
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
++E++ +VSWN++I +A G E++ F ++++ +PN ++++ + A G
Sbjct: 209 KMEKRTVVSWNSVIVGFAANGHAHESLVYFRKMQE----EGFKPNAVTFTGALAACNHVG 264
Query: 392 RGEEALDLFRKMQ 404
EE L F+ M+
Sbjct: 265 LVEEGLRYFQSMK 277
Score = 103 bits (258), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y R G++ DA +F+ P + + W +++ V G +E AL + +M+ GV D
Sbjct: 93 YMRNGQVDDAVKLFDEMP---ERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDY 149
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
+ AC +G+ SFG +H +V+ F+ NV + N LI +Y + G + + +
Sbjct: 150 VAIIAALAACTNLGAL----SFGLWIHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 205
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+FDK+ + +SWN + GFA N +L F++M+ EG +PN VT+T L++ G
Sbjct: 206 VFDKMEKRTVVSWNSVIVGFAANGHAHESLVYFRKMQEEGFKPNAVTFTGALAACNHVGL 265
Query: 253 LEETMDLFDMMRK 265
+EE + F M++
Sbjct: 266 VEEGLRYFQSMKR 278
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 192/583 (32%), Positives = 305/583 (52%), Gaps = 52/583 (8%)
Query: 114 ENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF-QGNVH 172
E A +Y M + G D TF +++ KF+ + +H H L G +
Sbjct: 47 EKAFTIYRSMLQNGTYPDRQTFLYLLQTTKFVAEVK-------QIHCHALVFGLLSKEEY 99
Query: 173 IVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG 232
+ N LI Y G F+C A +LF M
Sbjct: 100 LRNSLIKRYVDNG-----------------------------CFEC--ARQLFDEMS--- 125
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
+ N V++ +++ A+ G + ++LF MR G+E + +L +C L +GK
Sbjct: 126 -DRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETKLGK 184
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+H + K + + NAL+ +Y K ++K+A+ +F EK+ VSWN +I YA+ G
Sbjct: 185 SVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAKVG 244
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+ A ++F+Q+ D ++SW+++I +A NG LF +M V +
Sbjct: 245 ELELACDLFNQIPTRD--------IVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDK 296
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
VTI L+S AE AL+ GR IHG V++ + L++MY KCG +E ++F Q
Sbjct: 297 VTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQ 356
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
I +KD+ TW +MI+G+ +G G AL F M +A KP+ V FV+VL+ACSH+GLV+EG
Sbjct: 357 IPEKDVTTWTTMITGFAFHGFGNKALELFSVM-QAETKPNDVTFVSVLAACSHSGLVDEG 415
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
+IF M + + IEP +EHY C+VDLL R+G L +A +++ MPMEP+ +WG +L++CR
Sbjct: 416 LKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWGAVLSACR 475
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
MH+N ++AE ++ L E G Y+LLSN+YA GRW + +R ++G+KK+AG
Sbjct: 476 MHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRGVKKIAGC 535
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
S + V +H F++ N ++C +L L +M + VP
Sbjct: 536 SSVAVDGMVHDFTASNKQHPRWMDICSILSFLTNEMRLEADVP 578
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 187/372 (50%), Gaps = 17/372 (4%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTG-ANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
F +LLQ K + ++KQ+H +V G + +L ++ Y G AR +F+
Sbjct: 68 FLYLLQTTKFVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMS-- 125
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ + +N+++ G L+L+ MR G+ D FT ++ C +G +
Sbjct: 126 -DRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLGETK--- 181
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ VH + + N+ + N L+ MY K ++ + K+FD K+ +SWN + +G+
Sbjct: 182 -LGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGY 240
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
A + + A +LF ++ + V+W SL+S +A+ G LF M ++
Sbjct: 241 AKVGELELACDLFNQIPTR----DIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDK 296
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
I ++S A++ A G+ IHG +K + F +ALI +Y K G ++ A +F++
Sbjct: 297 VTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQ 356
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
I EK++ +W +IT +A G ++A+E+FS ++ + +PN +++ +V+ A + +G
Sbjct: 357 IPEKDVTTWTTMITGFAFHGFGNKALELFSVMQ-----AETKPNDVTFVSVLAACSHSGL 411
Query: 393 GEEALDLFRKMQ 404
+E L +F M+
Sbjct: 412 VDEGLKIFSSMK 423
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 9/206 (4%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+++ YA+ G L A ++F P + WNS++ NG Y L+ +M V
Sbjct: 236 IIAGYAKVGELELACDLFNQIP---TRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENV 292
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D T +I A MG+ G+ +H ++M + + LI MY K G +
Sbjct: 293 KPDKVTIVNLISAVAEMGA----LDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIE 348
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+F +F+++ K+ +W M +GFA + + ALELF M+ E +PN VT+ S+L++ +
Sbjct: 349 RAFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAE-TKPNDVTFVSVLAACS 407
Query: 249 RCGRLEETMDLFDMMRKR-GIEVGAE 273
G ++E + +F M+KR IE G E
Sbjct: 408 HSGLVDEGLKIFSSMKKRYSIEPGVE 433
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 203/693 (29%), Positives = 335/693 (48%), Gaps = 119/693 (17%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L + L+ + GRL DA ++F+ P + + + W S++ NG E AL ++ M
Sbjct: 50 LECKRLNRLVKSGRLADALDLFDRMP---RKNVVAWTSVMSGYTRNGRPEAALAMFADMV 106
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
+ GV + F + AC +G+ R G+ VH+ ++ GF G+ I + LI MY++
Sbjct: 107 ESGVAPNDFACNAALVACADLGALRA----GEQVHSLAVRAGFAGDAWIGSCLIEMYSRC 162
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G + + ++FD++ + + + + S F N + + A E +M +GL+PN T T++L
Sbjct: 163 GSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTIL 222
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK--GG 302
++ C R+ +G+ IHG++IK G
Sbjct: 223 TA---CPRV------------------------------------LGQQIHGYLIKKIGL 243
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
V+ ALI Y ++G+ K+A+ +F + KN+VSW +++ Y G +EA++VF
Sbjct: 244 RSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFG 303
Query: 363 QL--EKLDGGSMERPNVISWSAVIGAFASNGRG--------------------------- 393
+ E +D PN + S V+GA S G G
Sbjct: 304 DMISEGVD------PNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYG 357
Query: 394 -----EEALDLFRKMQLAKVVANSVTISG------------------------------- 417
EE + K++ +V+ + IS
Sbjct: 358 RTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSS 417
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
+LS CA+ A+L+ G + H +++ + I N L+NMY KCG + L F+ + D
Sbjct: 418 VLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHD 477
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+ +WNS+I G+ +G AL F +M G KPD F+ VL C+H+G+V EG F
Sbjct: 478 VTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFR 537
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNT 597
+M+ ++ P HYACM+D+LGR G EA ++ +MP EP+A +W TLL SC++H+N
Sbjct: 538 LMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNL 597
Query: 598 DVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
D+ + A ++ L + SY+L+SNIYA G WEDA KVR G+KK AG SWIE+
Sbjct: 598 DIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEI 657
Query: 658 KRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
++H F+S + + ++ ++L EL M++
Sbjct: 658 NNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 690
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/514 (22%), Positives = 222/514 (43%), Gaps = 94/514 (18%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+QVH+ + G A++ + ++ +Y+R G L A+ VF+ + + S++
Sbjct: 134 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMD---SPDVVGYTSLISAF 190
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ-MG 166
NG +E A + ++M K G+ + T ++ AC + GQ +H ++++ +G
Sbjct: 191 CRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV--------LGQQIHGYLIKKIG 242
Query: 167 FQG-NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
+ +V+ LI Y++ G+ + +FD + KN +SW M + + + AL++F
Sbjct: 243 LRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVF 302
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
M EG++PN A+++VL C +
Sbjct: 303 GDMISEGVDPNEF-----------------------------------ALSIVLGACGSI 327
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+G+ +H IK + V NAL+ +YG+ G V+ + + ++IE ++VSW I
Sbjct: 328 G---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAI 384
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA---FASNGRGEEALDLFRK 402
++ + G ++A+ + Q+ +G + PN ++S+V+ + AS +G + L K
Sbjct: 385 SANFQNGFGEKAIALLCQMHS-EGFT---PNGYAFSSVLSSCADVASLDQGMQFHCLALK 440
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGRE-------------IHGHVVRVSMNKNILV 449
+ + + + S C + + + + IHGH NK + V
Sbjct: 441 LGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEV 500
Query: 450 -----QNGL-------LNMYMKC---GCLEEGHLVFEQIEKKDLIT-----WNSMISGYG 489
NG+ L + M C G +EEG L F + + T + MI G
Sbjct: 501 FSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLG 560
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC 523
NG + AL +M F+PD + + +L++C
Sbjct: 561 RNGRFDEALRMINDM---PFEPDALIWKTLLASC 591
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 160/392 (40%), Gaps = 43/392 (10%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
+L C +I +Q+H I ++ +LS+Y R G + + +
Sbjct: 320 VLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIE---NPD 376
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
+ W + + N NG E A+ L +M G +G+ F V+ +C + S F
Sbjct: 377 LVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQF-- 434
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
H L++G + N LI MY+K GQM + FD + + SWN + G A +
Sbjct: 435 --HCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHG 492
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA 276
D + ALE+F +M G++P+ T+ +L G +EE F +M
Sbjct: 493 DANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLM------------- 539
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFE-------DYVFVKNALI-------CVYGKHGD 322
+ A H +I G F+ D F +ALI C ++ D
Sbjct: 540 -IDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLD 598
Query: 323 V-KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
+ K+A + E+ +++ S+ + YA G ++A +V ++D +++ SW
Sbjct: 599 IGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKV---RRRMDETGVKKDAGCSWI 655
Query: 382 AV---IGAFASNGRGEEALDLFRKMQLAKVVA 410
+ + FAS D +M L ++VA
Sbjct: 656 EINNEVHTFASRDMSHPNSDSIYQM-LGELVA 686
>gi|218193589|gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
Length = 950
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 188/583 (32%), Positives = 310/583 (53%), Gaps = 21/583 (3%)
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
G + DA ++ P S + +++ V N L ++AL ++ +M GV + T
Sbjct: 193 GSVRDAVELYRQCPL---CSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLV 249
Query: 137 LVIRACKFMGSFRFRFSF-GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
VI+AC G F S G + +++L N+ + N LI +Y + G + ++FD
Sbjct: 250 SVIKACIGAGEFDLAMSIVGLAMKSNLLD----KNLGVRNSLITLYLRKGDADAARRMFD 305
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ V++ +SW + +A D +GA + M E N V+W +L++ H + G +E
Sbjct: 306 EMEVRDVVSWTALLDVYAELGDLEGARRVLDEMP----ERNEVSWGTLVARHEQKGNAKE 361
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
+ L+ M G + VL CA L G+ IH +K + VFV +ALI
Sbjct: 362 AVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALID 421
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
+Y K + AQ +F + +KNIV WN+LI+ Y+ EA E+F + M
Sbjct: 422 MYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKK--------MPAR 473
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH 435
NV SW+++I +A N + +AL F M + +T S +L CA +L +G+ +H
Sbjct: 474 NVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVH 533
Query: 436 GHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
++++ + ++I V L +MY K G L+ VF ++ K++ + W +MI G NG E
Sbjct: 534 AKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAE 593
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
++ FE+MI AG P+ F+A+L ACSH+GLV F+MM + I P+ +HY CM
Sbjct: 594 ESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMM-QACGISPKAKHYTCM 652
Query: 556 VDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETT 615
VD+L RAG L EA D++ + + A W LL++C +++N ++ E A ++ L + T
Sbjct: 653 VDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNT 712
Query: 616 GSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
Y+LLSN+YA+ G+W+DAA++RI K LKK G SW++++
Sbjct: 713 AGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIR 755
Score = 147 bits (370), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 195/441 (44%), Gaps = 46/441 (10%)
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
+ K G + + +LFD + ++ +S+ M A+EL+++ L + P F
Sbjct: 158 HVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSV-PFF--- 213
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
T++++ ++ + +F M G+ + V+ C + I G +K
Sbjct: 214 TAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMK 273
Query: 301 GGFEDY-VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
D + V+N+LI +Y + GD A+ +F E+E +++VSW AL+ YAE G + A
Sbjct: 274 SNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARR 333
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
V + M N +SW ++ G +EA+ L+ +M N S +L
Sbjct: 334 VLDE--------MPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVL 385
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
CA L GR+IH ++++ + N+ V + L++MY KC L + ++F + +K+++
Sbjct: 386 GACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIV 445
Query: 480 TWNSMISGYGMN--------------------------GLGEN-----ALATFEEMIEAG 508
WNS+ISGY N G +N AL +F M+ +G
Sbjct: 446 CWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASG 505
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
P + F +VL AC+ + G+ + +++ I+ + + D+ ++G L +
Sbjct: 506 QSPGEITFSSVLLACASLCSLEMGKMVHAKIIK-LGIKESIFVGTALSDMYAKSGDLDSS 564
Query: 569 SDIVKNMPMEPNAYVWGTLLN 589
+ MP N W ++
Sbjct: 565 KRVFYEMPKR-NDVAWTAMIQ 584
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 169/378 (44%), Gaps = 45/378 (11%)
Query: 31 LDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
+ CF +L C ++ L+ ++HNQ + + + F+++ ++ +Y + +L DA+ +F
Sbjct: 378 ISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFY 437
Query: 88 TAP---FDCKSSSL-------------------------LWNSILRVNVSNGLYENALKL 119
+ P C +S + WNSI+ N + +ALK
Sbjct: 438 SLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKS 497
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
+ M G TF V+ AC + S G++VH ++++G + ++ + L
Sbjct: 498 FHAMLASGQSPGEITFSSVLLACASLCSLE----MGKMVHAKIIKLGIKESIFVGTALSD 553
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MYAK G + S ++F ++ +N ++W M G A N + ++ LF+ M G+ PN T
Sbjct: 554 MYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQT 613
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK---VIHG 296
+ ++L + + G +E M F+MM+ GI A+ ++ V A A H+ + ++
Sbjct: 614 FLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLAR--AGHLAEAEDLLLK 671
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
K + + +A K + A+ L E+++ N + L YA G +
Sbjct: 672 IESKSEANSWAALLSACNIYRNKEMGERAAKRL-QELDKDNTAGYVLLSNMYASCGKWKD 730
Query: 357 AVEVFSQLE----KLDGG 370
A E+ ++ K DGG
Sbjct: 731 AAEMRILMKGINLKKDGG 748
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 156/342 (45%), Gaps = 52/342 (15%)
Query: 301 GGFEDYV--------FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
G F D V F + ++ + K GD+ A+ LF + E+++VS+ ++ + + G
Sbjct: 134 GAFRDCVSVVGAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRG 193
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+AVE++ Q +V ++A+I F N ++AL +F +M V N
Sbjct: 194 SVRDAVELYRQCPLC--------SVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNE 245
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVS-MNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
+T+ ++ C + ++ I G ++ + ++KN+ V+N L+ +Y++ G + +F+
Sbjct: 246 ITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFD 305
Query: 472 QIEKKDLITWNSMISGYG-------------------------------MNGLGENALAT 500
++E +D+++W +++ Y G + A++
Sbjct: 306 EMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSL 365
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
+ +M+ G +P+ F +VL AC+ + GR+I + ++ + + ++D+
Sbjct: 366 YSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLK-MACSNNVFVSSALIDMYC 424
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
+ L +A I ++P + N W +L++ N+ + EA
Sbjct: 425 KCKQLPDAQMIFYSLP-QKNIVCWNSLISG--YSNNSKMVEA 463
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 305/549 (55%), Gaps = 16/549 (2%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAK--MGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+H VL+ G + ++ L+ YA + K+F + N WN++ G N
Sbjct: 52 LHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLEN 111
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
A+ + RM ++ PN T+ +L + + ++E + + K GI
Sbjct: 112 NKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIK 170
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
+ + + A G++ + E V N +I Y K G ++ A+ LF+++
Sbjct: 171 SAGIHMYASF-----GRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPV 225
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
KNI SWN +I A+ G +A ++F ++ + D ISWS+++ + S GR +E
Sbjct: 226 KNIGSWNVMINGLAKGGNLGDARKLFDEMSERD--------EISWSSMVDGYISAGRYKE 277
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
AL++F++MQ + +S +L+ C+ A++ GR +H ++ R S+ + ++ LL+
Sbjct: 278 ALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLD 337
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY KCG L+ G VFE+++++++ TWN+MI G ++G E+AL F ++ E KP+G+
Sbjct: 338 MYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGIT 397
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
V VL+AC+HAG V++G RIF M + ++P++EHY CMVDLLGR+GL EA D++ +M
Sbjct: 398 LVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM 457
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
PM+PNA VWG LL +CR+H N D+AE + + L + +G Y+LLSNIYA GR++D +
Sbjct: 458 PMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVS 517
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
K+R K +G+K V G S +++ +H F G+ +K + L+ + +++ G P
Sbjct: 518 KIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSP 577
Query: 696 DNDIILWEM 704
D +L+++
Sbjct: 578 DTSQVLFDI 586
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 208/436 (47%), Gaps = 53/436 (12%)
Query: 4 SLLHQPHQFSPSNPSRPFSIITY---NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGAN 60
S H P F P + S +I T ++L FD + ++ L Q+H ++ +G
Sbjct: 5 STSHLPSPFKPVDFSAEKNIPTSKLPQKTVLKLFDS--KSITSLQYLTQLHGLVLRSGHF 62
Query: 61 ASAFLAARVLSIYA--RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
+++ +L YA F A VF + P + +WN +++ + N A+
Sbjct: 63 QDHYVSGALLKCYANPHFSNFDFALKVFSSIP---NPNVFIWNIVIKGCLENNKLFKAIY 119
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
Y +M + + FT+P + +AC + + G+ +H HV++ G +VHI + I
Sbjct: 120 FYGRM-VIDARPNKFTYPTLFKACSVAQAVQE----GRQIHGHVVKHGIGSDVHIKSAGI 174
Query: 179 GMYAKMGQMSDSFK------------------------------LFDKVRVKNYISWNMM 208
MYA G++ D+ K LF ++ VKN SWN+M
Sbjct: 175 HMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVM 234
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+G A + A +LF M E + ++W+S++ + GR +E +++F M++
Sbjct: 235 INGLAKGGNLGDARKLFDEMS----ERDEISWSSMVDGYISAGRYKEALEIFQQMQREET 290
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
G ++ VL+ C+++ A G+ +H ++ + + + AL+ +Y K G + +
Sbjct: 291 RPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWE 350
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+F E++E+ I +WNA+I A G ++A+E+FS+L++ G M +PN I+ V+ A A
Sbjct: 351 VFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQE---GRM-KPNGITLVGVLTACA 406
Query: 389 SNGRGEEALDLFRKMQ 404
G ++ L +F+ M+
Sbjct: 407 HAGFVDKGLRIFQTMR 422
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 165/343 (48%), Gaps = 23/343 (6%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
A+ G L DAR +F+ + + W+S++ +S G Y+ AL+++ +M++ F
Sbjct: 239 AKGGNLGDARKLFDEM---SERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRF 295
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
V+ AC +G+ G+ VH ++ + + + + L+ MYAK G++ +++
Sbjct: 296 ILSSVLAACSNIGAI----DQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEV 351
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
F++++ + +WN M G A++ + ALELF +++ ++PN +T +L++ A G +
Sbjct: 352 FEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFV 411
Query: 254 EETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
++ + +F MR+ G++ E ++ + L + + + V A
Sbjct: 412 DKGLRIFQTMREFYGVDPELEHYGCMVDL---LGRSGLFSEAEDLINSMPMKPNAAVWGA 468
Query: 313 LICVYGKHGDVKVAQ---NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL-- 367
L+ HG+ +A+ + E+E +N + L YA+ G D+ S++ KL
Sbjct: 469 LLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDV----SKIRKLMK 524
Query: 368 DGGSMERPNV--ISWSAVIGAFA-SNGRGEEALDLFRKMQLAK 407
D G P V + + + F +G + +++RK+++ K
Sbjct: 525 DRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIK 567
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 189/644 (29%), Positives = 331/644 (51%), Gaps = 81/644 (12%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
QVH L+ G ++ +L++Y++ + DA NVF+ + LWN+++ V
Sbjct: 277 QVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSV---KKTELWNAMISAYV 333
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
NG + LK+Y +M+ L + D T V+ +C +GS+ FG+++H +++ Q
Sbjct: 334 GNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSY----DFGRLIHAELVKRPIQ 389
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
NV + + L+ MY+K G D+ +F+ ++ ++
Sbjct: 390 SNVALQSALLTMYSKCGNSDDANSIFNTIKGRD--------------------------- 422
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
V W S++S + + E ++ ++ M G + ++ +A V+S C L
Sbjct: 423 --------VVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNV 474
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
++G IHG IK G E VFV ++L+ +Y K K++ N+FS++ KN+V+
Sbjct: 475 NLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVA-------- 526
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
W+++I + NG + ++ LF +M +
Sbjct: 527 -------------------------------WNSIISCYCRNGLPDLSISLFSQMTQYGL 555
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+SV+I+ +L + A L G+ +HG+++R + ++ ++N L++MY+KCG L+
Sbjct: 556 FPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQH 615
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
+F+ + + +L+TWN MI+G G +G A++ F+EM G PD + F+++L++C+H G
Sbjct: 616 IFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGF 675
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ EG ++F +M E IEP+MEHY +VDLLGRAG L +A VKN+P+EP+ +W +LL
Sbjct: 676 IEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRSIWLSLL 735
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
SCR+H N ++ + A ++ + +Y+ L N+Y + + AA +R S K KGLKK
Sbjct: 736 CSCRVHHNVELGKLAAHKLLDIEPSRGSNYVQLLNLYGENELQDRAANLRASMKEKGLKK 795
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
G SWIEV I +F SG+S + ++L L M KG
Sbjct: 796 TPGCSWIEVGNSIDVFFSGDSSSPRTIEIYDLLNSLRRNMRKKG 839
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/589 (22%), Positives = 262/589 (44%), Gaps = 91/589 (15%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANAS-AFLAARVLSIYARFGRLFDARNVFETA 89
+ LL+ C + L K +H+ +I G S ++ +++ Y + G +A VF+
Sbjct: 52 YPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKL 111
Query: 90 PFDCKSSS--LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
P S WNSI+ G + + + +M+ GV D ++ C +G+
Sbjct: 112 PESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSL------CILLGA 165
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWN 206
+ + +H + ++ F G+ + + LI MY G+ D+++LF ++ K N ++WN
Sbjct: 166 SDGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWN 225
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
+M GF N G E +++++ + +
Sbjct: 226 VMIGGFGEN-----------------------------------GLWENSLEVYLLAKNE 250
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
+++ + + LS C G +H ++K GFE+ +V +L+ +Y K V+ A
Sbjct: 251 NVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDA 310
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+N+F ++ K WNA+I++Y G + ++++ Q++ L
Sbjct: 311 ENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVL------------------- 351
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
++ +S+T + +LS C + + GR IH +V+ + N
Sbjct: 352 --------------------QIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSN 391
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+ +Q+ LL MY KCG ++ + +F I+ +D++ W SMISG+ N AL + M
Sbjct: 392 VALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTV 451
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
G KPD +V+SAC+ VN G I + ++ +E + + +VD+ + +
Sbjct: 452 YGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKS-GLEQDVFVASSLVDMYSKFNFPK 510
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI--FGLITE 613
+ ++ +MP++ N W ++++ + D++ ++ SQ+ +GL +
Sbjct: 511 MSGNVFSDMPLK-NLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPD 558
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/529 (24%), Positives = 236/529 (44%), Gaps = 93/529 (17%)
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG- 166
V G Y +AL+ Y + + FT+P +++AC F+ + + +G+ +H+ ++ G
Sbjct: 28 VQQGQYVDALQFYSRNP---LNATRFTYPSLLKACGFLSNLQ----YGKTIHSTIITKGF 80
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F + +I LI Y K G ++ K+FDK+
Sbjct: 81 FYSDPYITTSLINFYFKCGSFGNAVKVFDKL----------------------------P 112
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
E+ G + F W S+++ + R G +E + F M+ G+ A ++ ++L A
Sbjct: 113 ESEVSGQDVTF--WNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLG-----A 165
Query: 287 AD-HMG--KVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK-NIVSWN 342
+D H+G K IHG+ ++ F F+++ LI +Y G A LF E+E+K N+V+WN
Sbjct: 166 SDGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWN 225
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
+I + E GL + ++EV+ L K
Sbjct: 226 VMIGGFGENGLWENSLEVY-------------------------------------LLAK 248
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
+ K+V+ S T + LS C + ++ G ++H +V++ + V LL MY KC
Sbjct: 249 NENVKLVSASFTST--LSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKL 306
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
+E+ VF+Q+ K WN+MIS Y NG + L +++M PD + VLS+
Sbjct: 307 VEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSS 366
Query: 523 CSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAY 582
C G + GR I +V+ I+ + + ++ + + G +A+ I + +
Sbjct: 367 CCLVGSYDFGRLIHAELVKR-PIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGR-DVV 424
Query: 583 VWGTLLNS-CRMHKNTDVAEAMAS-QIFGLITETTGSYMLLSNIYAASG 629
WG++++ C+ K + E S ++G E S ++ S + A +G
Sbjct: 425 AWGSMISGFCQNRKYMEALEFYNSMTVYG---EKPDSDIMASVVSACTG 470
>gi|226530385|ref|NP_001145846.1| CRR4 [Zea mays]
gi|219884683|gb|ACL52716.1| unknown [Zea mays]
gi|414878658|tpg|DAA55789.1| TPA: CRR4 [Zea mays]
Length = 601
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 190/624 (30%), Positives = 326/624 (52%), Gaps = 62/624 (9%)
Query: 82 ARNVFETAPFDCKSSSLLWNSIL-RVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR 140
AR++F+ P + + S+L ++++ L E L+ R+ G + G PLV++
Sbjct: 31 ARHLFDAVPRPTAALCCAFVSVLSKLSLHQELIEAVSSLH---RRGGAIPSG-CIPLVLK 86
Query: 141 ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
+C + G H H L G G+V + L+ YAK G M + F+++ +K
Sbjct: 87 SCALSAAS----CQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPIK 142
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
+ I N + +G++ + D + A LF M + +W S+++ +A G +E + LF
Sbjct: 143 DPIPMNCLITGYSRSGDVEEARRLFDSMPRK----TSASWNSMIACYAHGGEFQEALTLF 198
Query: 261 DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
D M + G A I V S+CA K
Sbjct: 199 DQMLREGASPNAITITTVFSICA-----------------------------------KT 223
Query: 321 GDVKV---AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
GD++ A+ SE + +N++ AL+ Y + DEA F + M R +V
Sbjct: 224 GDLETGRRAKAWVSEEDLQNVIVHTALMEMYVKCRAIDEARREFDR--------MPRRDV 275
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
++WS +I ++ NGR E+L+LF +M+ N VT+ G+LS CA+ + +G +I +
Sbjct: 276 VAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGSY 335
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
+ ++ + + L++MY KCG + VF ++E+K +I WNSMI G +NG E+A
Sbjct: 336 IESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNGFAEDA 395
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR-EFRIEPQMEHYACMV 556
+A + EM+ G +P+ + F+A+L+AC+HAGLV++G F M + + PQ+EH AC+V
Sbjct: 396 IALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHASPQVEHCACIV 455
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
DLL ++G L EA + +M +EPNA +W TLL++CR H + ++A+ A ++ L ++
Sbjct: 456 DLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAKLAAGKLVVLEPNSSS 515
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKN 676
Y+LLSNIYA +G W D ++R ++K L+K++ SWIE+ ++H F ++
Sbjct: 516 IYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYHPRSAE 575
Query: 677 VCEVLEELALQMENKGCVPDNDII 700
+ V++ L LQ+E PD+++I
Sbjct: 576 IYNVVDGLGLQLERTS--PDHELI 597
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 156/335 (46%), Gaps = 47/335 (14%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y+R G + +AR +F++ P + +S WNS++ G ++ AL L+ +M + G +
Sbjct: 154 YSRSGDVEEARRLFDSMP---RKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNA 210
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
T V C G V LQ NV + L+ MY K + ++ +
Sbjct: 211 ITITTVFSICAKTGDLETGRRAKAWVSEEDLQ-----NVIVHTALMEMYVKCRAIDEARR 265
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
FD++ ++ ++W+ M +G++ N +LELF+RM+ +PN VT
Sbjct: 266 EFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVT------------- 312
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
+ VLS CA L +D +G+ I ++ ++ +A
Sbjct: 313 ----------------------LVGVLSACAQLGSDELGEQIGSYIESQTLPLTSYLGSA 350
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
LI +Y K G V A+++F +E+K +++WN++I A G ++A+ ++ ++ G
Sbjct: 351 LIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNGFAEDAIALYGEMV----GDG 406
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
+PN I++ A++ A G ++ + F++M+ K
Sbjct: 407 VQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNK 441
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 138/300 (46%), Gaps = 21/300 (7%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++ +Y + + +AR F+ P + + W++++ NG +L+L+ +M+
Sbjct: 250 LMEMYVKCRAIDEARREFDRMP---RRDVVAWSTMIAGYSHNGRPHESLELFERMKATNC 306
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ T V+ AC +GS G + + L + ++ + LI MY K G ++
Sbjct: 307 KPNEVTLVGVLSACAQLGSDELGEQIGSYIESQTLPL----TSYLGSALIDMYTKCGHVA 362
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ +F ++ K I+WN M G ALN + A+ L+ M +G++PN +T+ +LL++
Sbjct: 363 RARDVFHRMEQKVVIAWNSMIRGLALNGFAEDAIALYGEMVGDGVQPNEITFLALLTACT 422
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAE---AIAVVLSVCADLAADHMGKV--IHGFVIKGGF 303
G +++ M F M+K + +V +C G++ + F+
Sbjct: 423 HAGLVDKGMAFFQEMKKNKQHASPQVEHCACIVDLLCKS------GRLWEAYKFICDMEV 476
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSE--IEEKNIVSWNALITS-YAEAGLCDEAVEV 360
E + L+ H DV++A+ + + E N S L+++ YA+AGL + E+
Sbjct: 477 EPNAVIWTTLLSACRAHADVELAKLAAGKLVVLEPNSSSIYVLLSNIYADAGLWGDVREI 536
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 194/665 (29%), Positives = 332/665 (49%), Gaps = 84/665 (12%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L C + L K+VH Q++ G + + ++S+Y + G + DAR VF+
Sbjct: 161 FLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLH 220
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
S+ +N ++ +G +E A +L+ +M+++G+ + +F ++ C +
Sbjct: 221 IRDVST---FNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEAL-- 275
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
++G+ VH + G ++ + LI MY G + + ++FD ++V++ +S
Sbjct: 276 --AWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVS------ 327
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
WT ++ +A G +E+ LF M++ GI+
Sbjct: 328 -----------------------------WTVMIEGYAENGNIEDAFGLFATMQEEGIQP 358
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+++ CA A + + IH V GF + V AL+ +Y K G +K
Sbjct: 359 DRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIK------ 412
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+A +VF +M R +V+SWSA+IGA+ N
Sbjct: 413 -------------------------DARQVFD--------AMPRRDVVSWSAMIGAYVEN 439
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
G G EA + F M+ + + + VT LL+ C AL++G EI+ ++ + ++ +
Sbjct: 440 GYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLG 499
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
N L+ M K G +E +F+ + ++D+ITWN+MI GY ++G AL F+ M++ F+
Sbjct: 500 NALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFR 559
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
P+ V FV VLSACS AG V+EGRR F ++ I P ++ Y CMVDLLGRAG L EA
Sbjct: 560 PNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAEL 619
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
++K+MP++P + +W +LL +CR+H N DVAE A + + Y+ LS++YAA+G
Sbjct: 620 LIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGM 679
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
WE+ AKVR +++G++K G +WIEV K+H F + + + L L ++
Sbjct: 680 WENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKR 739
Query: 691 KGCVP 695
+G +P
Sbjct: 740 EGYIP 744
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/508 (23%), Positives = 225/508 (44%), Gaps = 103/508 (20%)
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
+ G+ V +H++Q G Q N++ +N LI +Y+ G ++++ ++FD V K
Sbjct: 74 ALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKT----------- 122
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
VTW +L++ +A+ G ++E LF M G+E
Sbjct: 123 ------------------------VVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSI 158
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
VL C+ A + GK +H V+ GF + AL+ +Y K G + A+ +F
Sbjct: 159 ITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDG 218
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK-------------LDGGSMERPNVIS 379
+ +++ ++N ++ YA++G ++A E+F ++++ LDG P ++
Sbjct: 219 LHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDG--CWTPEALA 276
Query: 380 W--------------------SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG-- 417
W +++I + + G E A +F M++ VV+ +V I G
Sbjct: 277 WGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYA 336
Query: 418 -----------------------------LLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
+++ CA SA LN REIH V ++L
Sbjct: 337 ENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLL 396
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
V L++MY KCG +++ VF+ + ++D+++W++MI Y NG G A TF M +
Sbjct: 397 VSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSN 456
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+PDGV ++ +L+AC H G ++ G I+ ++ + + ++ + + G ++ A
Sbjct: 457 IEPDGVTYINLLNACGHLGALDVGMEIYTQAIKA-DLVSHVPLGNALIIMNAKHGSVERA 515
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
I M + + W ++ +H N
Sbjct: 516 RYIFDTM-VRRDVITWNAMIGGYSLHGN 542
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/589 (22%), Positives = 246/589 (41%), Gaps = 140/589 (23%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
L Q+C + KQV + +I G + + ++ +Y+ G + +AR +F++
Sbjct: 63 LFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVE--- 119
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + WN+++ G + A L+ +M G+ TF V+ AC +
Sbjct: 120 NKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAG----LN 175
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
+G+ VH V+ GF + I L+ MY K G M D+ ++FD + +++ ++N+M G+A
Sbjct: 176 WGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYA 235
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTW--------------------------------- 240
+ D + A ELF RM+ GL+PN +++
Sbjct: 236 KSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIR 295
Query: 241 --TSLLSSHARCGRLEETMDLFDMMRKR-------------------------------G 267
TSL+ + CG +E +FD M+ R G
Sbjct: 296 VATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEG 355
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
I+ +++ CA A + + IH V GF + V AL+ +Y K G +K A+
Sbjct: 356 IQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDAR 415
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK----LDG-------------- 369
+F + +++VSW+A+I +Y E G EA E F +++ DG
Sbjct: 416 QVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLG 475
Query: 370 ----------------------------------GSMERP----------NVISWSAVIG 385
GS+ER +VI+W+A+IG
Sbjct: 476 ALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIG 535
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR-VSMN 444
++ +G EAL LF +M + NSVT G+LS C+ + ++ GR +++ +
Sbjct: 536 GYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIV 595
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT-WNSMISGYGMNG 492
+ + ++++ + G L+E L+ + + K + W+S++ ++G
Sbjct: 596 PTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHG 644
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 162/342 (47%), Gaps = 56/342 (16%)
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
NI N LI Y+ G EA ++F S+E V++W+A+I +A G +EA
Sbjct: 91 NIYELNTLIKLYSICGNVTEARQIFD--------SVENKTVVTWNALIAGYAQVGHVKEA 142
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
LFR+M + + +T +L C+ A LN G+E+H VV + + L++M
Sbjct: 143 FALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSM 202
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y+K G +++ VF+ + +D+ T+N M+ GY +G E A F M + G KP+ ++F
Sbjct: 203 YVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISF 262
Query: 517 VAVL----------------SACSHAGLVNE-------------------GRRIFD-MMV 540
+++L + C +AGLV++ RR+FD M V
Sbjct: 263 LSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKV 322
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP---MEPNAYVWGTLLNSCRMHKNT 597
R+ + + M++ G +++A + M ++P+ + ++N+C + N
Sbjct: 323 RD------VVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANL 376
Query: 598 DVAEAMASQ--IFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
+ A + SQ I G T+ S L+ ++YA G +DA +V
Sbjct: 377 NHAREIHSQVDIAGFGTDLLVSTALV-HMYAKCGAIKDARQV 417
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
+S T L C E +G+++ H+++ NI N L+ +Y CG + E +F
Sbjct: 56 DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIF 115
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
+ +E K ++TWN++I+GY G + A A F +M++ G +P + F++VL ACS +N
Sbjct: 116 DSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLN 175
Query: 531 EGRRIFDMM-----VREFRI 545
G+ + + V +FRI
Sbjct: 176 WGKEVHAQVVTAGFVSDFRI 195
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 305/549 (55%), Gaps = 16/549 (2%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAK--MGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+H VL+ G + ++ L+ YA + K+F + N WN++ G N
Sbjct: 52 LHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLEN 111
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
A+ + RM ++ PN T+ +L + + ++E + + K GI
Sbjct: 112 NKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIK 170
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
+ + + A G++ + E V N +I Y K G ++ A+ LF+++
Sbjct: 171 SAGIQMYASF-----GRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPV 225
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
KNI SWN +I A+ G +A ++F ++ + D ISWS+++ + S GR +E
Sbjct: 226 KNIGSWNVMINGLAKGGNLGDARKLFDEMSERDE--------ISWSSMVDGYISAGRYKE 277
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
AL++F++MQ + +S +L+ C+ A++ GR +H ++ R S+ + ++ LL+
Sbjct: 278 ALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLD 337
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY KCG L+ G VFE+++++++ TWN+MI G ++G E+AL F ++ E KP+G+
Sbjct: 338 MYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGIT 397
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
V VL+AC+HAG V++G RIF M + ++P++EHY CMVDLLGR+GL EA D++ +M
Sbjct: 398 LVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSM 457
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
PM+PNA VWG LL +CR+H N D+AE + + L + +G Y+LLSNIYA GR++D +
Sbjct: 458 PMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVS 517
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
K+R K +G+K V G S +++ +H F G+ +K + L+ + +++ G P
Sbjct: 518 KIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIKERLQMAGHSP 577
Query: 696 DNDIILWEM 704
D +L+++
Sbjct: 578 DTSQVLFDI 586
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 208/436 (47%), Gaps = 53/436 (12%)
Query: 4 SLLHQPHQFSPSNPSRPFSIITY---NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGAN 60
S H P F P + S +I T ++L FD + ++ L Q+H ++ +G
Sbjct: 5 STSHLPSPFKPVDFSAEKNIPTSKLPQKTVLKLFDS--KSITSLQYLTQLHALVLRSGHF 62
Query: 61 ASAFLAARVLSIYA--RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
+++ +L YA F A VF + P + +WN +++ + N A+
Sbjct: 63 QDHYVSGALLKCYANPHFSNFDFALKVFSSIP---NPNVFIWNIVIKGCLENNKLFKAIY 119
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
Y +M + + FT+P + +AC + + G+ +H HV++ G +VHI + I
Sbjct: 120 FYGRM-VIDARPNKFTYPTLFKACSVAQAVQE----GRQIHGHVVKHGIGSDVHIKSAGI 174
Query: 179 GMYAKMGQMSDSFK------------------------------LFDKVRVKNYISWNMM 208
MYA G++ D+ K LF ++ VKN SWN+M
Sbjct: 175 QMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVM 234
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+G A + A +LF M E + ++W+S++ + GR +E +++F M++
Sbjct: 235 INGLAKGGNLGDARKLFDEMS----ERDEISWSSMVDGYISAGRYKEALEIFQQMQREET 290
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
G ++ VL+ C+++ A G+ +H ++ + + + AL+ +Y K G + +
Sbjct: 291 RPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWE 350
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+F E++E+ I +WNA+I A G ++A+E+FS+L++ G M +PN I+ V+ A A
Sbjct: 351 VFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQE---GRM-KPNGITLVGVLTACA 406
Query: 389 SNGRGEEALDLFRKMQ 404
G ++ L +F+ M+
Sbjct: 407 HAGFVDKGLRIFQTMR 422
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 164/339 (48%), Gaps = 15/339 (4%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
A+ G L DAR +F+ + + W+S++ +S G Y+ AL+++ +M++ F
Sbjct: 239 AKGGNLGDARKLFDEM---SERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRF 295
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
V+ AC +G+ G+ VH ++ + + + + L+ MYAK G++ +++
Sbjct: 296 ILSSVLAACSNIGAI----DQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEV 351
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
F++++ + +WN M G A++ + ALELF +++ ++PN +T +L++ A G +
Sbjct: 352 FEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFV 411
Query: 254 EETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
++ + +F MR+ G++ E ++ + L + + + V A
Sbjct: 412 DKGLRIFQTMREFYGVDPELEHYGCMVDL---LGRSGLFSEAEDLINSMPMKPNAAVWGA 468
Query: 313 LICVYGKHGDVKVAQ---NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
L+ HG+ +A+ + E+E +N + L YA+ G D+ ++ ++
Sbjct: 469 LLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGI 528
Query: 370 GSMERPNVISWSAVIGAFA-SNGRGEEALDLFRKMQLAK 407
++ +++ + + F +G + +++RK+++ K
Sbjct: 529 KTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLKIIK 567
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 322 bits (826), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 192/628 (30%), Positives = 331/628 (52%), Gaps = 87/628 (13%)
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
A VF+ P + + + W ++ G +A+ L++ M G + D FT+ V+ A
Sbjct: 9 AYKVFDKMP---ERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 65
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY---AKMGQMSDSFKLFDKVR 198
C +G + G+ +H+ V+++G +V + L+ MY A G + DS K+F+++
Sbjct: 66 CTELG----LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 121
Query: 199 VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE-ETM 257
E N ++WT++++++A+ G + E +
Sbjct: 122 -----------------------------------EHNVMSWTAIITAYAQSGECDKEAI 146
Query: 258 DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
+LF M I + + VL C +L+ + G+ ++ + +K G
Sbjct: 147 ELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG--------------- 191
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL-EKLDGGSMERPN 376
I N V N+LI+ YA +G ++A + F L EK N
Sbjct: 192 ---------------IASVNCVG-NSLISMYARSGRMEDARKAFDILFEK---------N 226
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
++S++A++ +A N + EEA LF ++ + ++ T + LLS A A+ G +IHG
Sbjct: 227 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 286
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
+++ N + N L++MY +CG +E VF ++E +++I+W SMI+G+ +G
Sbjct: 287 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 346
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
AL F +M+E G KP+ + +VAVLSACSH G+++EG++ F+ M +E I P+MEHYACMV
Sbjct: 347 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMV 406
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
DLLGR+GLL EA + + +MP+ +A VW TLL +CR+H NT++ A I +
Sbjct: 407 DLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPA 466
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKN 676
+Y+LLSN++A++G+W+D K+R S K + L K AG SWIEV+ ++H F G +
Sbjct: 467 AYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQ 526
Query: 677 VCEVLEELALQMENKGCVPDNDIILWEM 704
+ + L++LA +++ G +PD D +L ++
Sbjct: 527 IYQELDQLASKIKEMGYIPDTDFVLHDI 554
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 190/377 (50%), Gaps = 53/377 (14%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARF---GRLFDARNVFE 87
+ +L C + L KQ+H+++I G + ++ +YA+ G + D+R VFE
Sbjct: 59 YSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFE 118
Query: 88 TAPFDCKSSSLLWNSILRVNVSNG-LYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
P + + + W +I+ +G + A++L+ KM + + F+F V++AC G
Sbjct: 119 QMP---EHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC---G 172
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
+ ++ G+ V+++ +++G + N LI MYA+ G+M D+ K FD + KN +S+N
Sbjct: 173 NLSDPYT-GEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYN 231
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
+ G+A N + A LF + G+ + T+ SLLS A G + +
Sbjct: 232 AIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGK----------- 280
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
G+ IHG ++KGG++ + NALI +Y + G+++ A
Sbjct: 281 ------------------------GEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAA 316
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+F+E+E++N++SW ++IT +A+ G A+E+F ++ L+ G+ +PN I++ AV+ A
Sbjct: 317 FQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKM--LETGT--KPNEITYVAVLSA 372
Query: 387 FASNGRGEEALDLFRKM 403
+ G E F M
Sbjct: 373 CSHVGMISEGQKHFNSM 389
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 123/236 (52%), Gaps = 10/236 (4%)
Query: 34 FDHLLQQCKTI---HQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C + + +QV++ + G + + ++S+YAR GR+ DAR F+
Sbjct: 164 FSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDIL- 222
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + +N+I+ N E A L+ ++ G+ FTF ++ +G+
Sbjct: 223 --FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAM-- 278
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H +L+ G++ N I N LI MY++ G + +F++F+++ +N ISW M +
Sbjct: 279 --GKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 336
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
GFA + ALE+F +M G +PN +T+ ++LS+ + G + E F+ M K
Sbjct: 337 GFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKE 392
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 322 bits (826), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 188/664 (28%), Positives = 347/664 (52%), Gaps = 89/664 (13%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
L++ C I QLKQ+H + I++ + + F+ ++++ + L A VF +
Sbjct: 12 LIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQ---EPD 68
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKL-GVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
++N+++R S+ A+ +Y KMR +LGD +T+P V +AC + +F G
Sbjct: 69 GFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKAC----ASQFAVEKG 124
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ VH ++++G++ + + + L+ Y G++ ++ ++FD+ K+ + WN
Sbjct: 125 KEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWN--------- 175
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEA 274
+L++ +AR G + ++ +F +M+ + +
Sbjct: 176 --------------------------ALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGT 209
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
+ ++ C + +G+ IHG+++K D+ + + + E
Sbjct: 210 MMGLIVACIESKNLKLGRAIHGYMMK---------------------DMVLREGVKLE-- 246
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
ALI Y + G D A ++F ++ + N + W+++I + G
Sbjct: 247 -------AALINLYVKCGYLDGARKLFDEIPE--------KNTVVWNSLICGYCQIGSLN 291
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK---NILVQN 451
E ++L R+M L+ + + T+SG+LS CA+ A N+G +H R + K ++ +
Sbjct: 292 EVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVH----RFAEKKGIWDVFIGT 347
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++MY KCG + VF+Q+ ++++ TWN+++SGY +G E+A+ F EM E+G +P
Sbjct: 348 ALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARP 407
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D + F+AVL AC+H+GLV G++ FD+M++ ++I P++EHY CMVDLLGRAGLLQEA ++
Sbjct: 408 DSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEAREL 467
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
+K M +EPN VWG LL++C +H N ++ E A + L GSY++L+N+YA++ R+
Sbjct: 468 IKMMVVEPNVVVWGALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRF 527
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
VR KG+ K G S IE+ +H F + + + + VL+EL+ +++
Sbjct: 528 NRVKAVREMMVEKGICKSHGCSMIEIGDVVHEFVVADKMHPRSEEIYSVLDELSKKLKMA 587
Query: 692 GCVP 695
G VP
Sbjct: 588 GYVP 591
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 322 bits (826), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 215/707 (30%), Positives = 368/707 (52%), Gaps = 63/707 (8%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL-WNSILRVNV 108
VH +L + + ++S+Y++ G+ A ++F+ S L+ W++++
Sbjct: 88 VHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMG---SSRDLISWSAMVSCFA 144
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF- 167
+N + AL +V M + G + + F RAC F S G + V++ G+
Sbjct: 145 NNNMGFRALLTFVDMIENGYYPNEYCFAAATRACS-TAEF---VSVGDSIFGFVVKTGYL 200
Query: 168 QGNVHIVNELIGMYAK-MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG-ALELF 225
Q +V + LI M+ K G + +FK+F+K+ +N ++W +M + + F G A++LF
Sbjct: 201 QSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRL-MQFGYAGEAIDLF 259
Query: 226 KRMELEGLEPNFVTWTSLLSS-------------HARCGRLEETMD------LFDMMRKR 266
M L G EP+ T + ++S+ H++ R T+D L +M K
Sbjct: 260 LEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKC 319
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY---VFVKNALICVYGKH--- 320
++ A + D +I G+V KGG+++ +F L V H
Sbjct: 320 SVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTF 379
Query: 321 ----------GDVKVAQNLFSE-----IEEKNIVSWNALITSYAEAGLCDEAVEVFSQL- 364
+++ + +F+ N V+ N+LI+ YA +G D+A + F L
Sbjct: 380 SSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVA-NSLISMYARSGRIDDARKAFDILF 438
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
EK N+IS++ VI A+A N EEAL+LF +++ + A++ T + LLS A
Sbjct: 439 EK---------NLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAAS 489
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
+ G +IH V++ + N V N L++MY +CG +E VFE +E +++I+W S+
Sbjct: 490 IGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSI 549
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I+G+ +G AL F +M+E G +P+ V ++AVLSACSH GLVNEG + F M E
Sbjct: 550 ITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHG 609
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
+ P+MEHYACMVD+LGR+G L EA + +MP + +A VW T L +CR+H N ++ + A
Sbjct: 610 VIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAA 669
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
I +Y+LLSN+YA++ +W++ + +R + K K L K AG SW+EV+ K+H F
Sbjct: 670 KMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKF 729
Query: 665 SSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVK 711
G++ + + L+ L+++++ G VP+ D +L ++ ++ K
Sbjct: 730 YVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEK 776
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 136/562 (24%), Positives = 220/562 (39%), Gaps = 122/562 (21%)
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR-FSFGQIVHNHVLQMG 166
++NG A+ M G D T+ L ++ C R R F G +VH + Q
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKC-----IRTRSFDIGTLVHEKLTQSD 96
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKV-RVKNYISWNMMFSGFALNFDCDGALELF 225
Q + +N LI +Y+K GQ + +F + ++ ISW+ M S FA N AL F
Sbjct: 97 LQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTF 156
Query: 226 KRMELEGLEPN-------------------------FVTWTSLLSSH--ARCGRLE---- 254
M G PN FV T L S CG ++
Sbjct: 157 VDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVK 216
Query: 255 ------ETMDLFDMMRKR-------------------------------GIEVGAEAIAV 277
+F+ M +R G E ++
Sbjct: 217 GRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSG 276
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK---HGDVKVAQNLFSEIE 334
V+S CA++ +G+ +H I+ G V LI +Y K G + A+ +F +I
Sbjct: 277 VISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQIL 336
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
+ N+ SW A+IT Y + G DE E LD
Sbjct: 337 DHNVFSWTAMITGYVQKGGYDE--------EALD-------------------------- 362
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
LFR M L V+ N T S L CA AAL IG ++ H V++ + V N L+
Sbjct: 363 ----LFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLI 418
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY + G +++ F+ + +K+LI++N++I Y N E AL F E+ + G
Sbjct: 419 SMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAF 478
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC--MVDLLGRAGLLQEASDIV 572
F ++LS + G + +G +I R + ++ C ++ + R G ++ A +
Sbjct: 479 TFASLLSGAASIGTIGKGEQIH---ARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVF 535
Query: 573 KNMPMEPNAYVWGTLLNSCRMH 594
++M + N W +++ H
Sbjct: 536 EDME-DRNVISWTSIITGFAKH 556
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 121/233 (51%), Gaps = 10/233 (4%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L+ C + L+ QV + G ++ +A ++S+YAR GR+ DAR F+
Sbjct: 379 FSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL- 437
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + +N+++ N E AL+L+ ++ G+ FTF ++ +G+
Sbjct: 438 --FEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGT--- 492
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H V++ G + N + N LI MY++ G + +F++F+ + +N ISW + +
Sbjct: 493 -IGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIIT 551
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
GFA + ALELF +M EG+ PN VT+ ++LS+ + G + E F M
Sbjct: 552 GFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSM 604
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 171/427 (40%), Gaps = 80/427 (18%)
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
GRL + + + M +G + ++ L C + +G ++H + + +
Sbjct: 45 GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104
Query: 311 NALICVYGKHGDVKVAQNLFSEI-EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG 369
N+LI +Y K G + A ++F + ++++SW+A+++
Sbjct: 105 NSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVS----------------------- 141
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
FA+N G AL F M N + C+ + ++
Sbjct: 142 ----------------CFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVS 185
Query: 430 IGREIHGHVVRVS-MNKNILVQNGLLNMYMKC-GCLEEGHLVFEQIEKKDLITWNSMISG 487
+G I G VV+ + ++ V GL++M++K G L VFE++ +++ +TW MI+
Sbjct: 186 VGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITR 245
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
G A+ F EMI +G++PD V+SAC++ L+ G+++ +R
Sbjct: 246 LMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLD 305
Query: 548 Q------MEHYA-CMVD---------------------------LLGRAGLLQEASDIVK 573
+ + YA C VD + + G +EA D+ +
Sbjct: 306 RCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFR 365
Query: 574 NMPME---PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL-ITETTGSYMLLSNIYAASG 629
M + PN + + + L +C + E + + L + L ++YA SG
Sbjct: 366 GMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSG 425
Query: 630 RWEDAAK 636
R +DA K
Sbjct: 426 RIDDARK 432
>gi|224137724|ref|XP_002322628.1| predicted protein [Populus trichocarpa]
gi|222867258|gb|EEF04389.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 322 bits (826), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 294/527 (55%), Gaps = 24/527 (4%)
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN 236
++ Y ++ ++ ++ +LF+ + VKN +SWN M G+ N + D A+E+F+RM E N
Sbjct: 44 MLSGYVRLKRIEEAERLFEVMPVKNVVSWNTMIDGYGKNREVDKAIEVFERMH----ERN 99
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
V+W +++++ +CGR+EE FD M KR + +V+ + D KV
Sbjct: 100 MVSWNAVIAALVQCGRVEEARRRFDEMPKRDV---ISWTTMVMGLARSGRVDEARKVFDR 156
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
E V NA++ Y K+ + A +LF + E+N+ SWN +IT + + G
Sbjct: 157 MP-----ERNVVSWNAMVTGYAKNMRLDEAFDLFERMPERNLSSWNTMITGFIQNGELAW 211
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM-QLAKVVANSVTI 415
A +VF++ M NV+SW+ +I + G E AL +F +M + N T
Sbjct: 212 ARKVFNE--------MPEKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTF 263
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ--I 473
+L C++ A L G+++H + + V + LLNMY KCG L +F+ I
Sbjct: 264 VNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDVVI 323
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
++DL+ WN MI+ Y +G G A+ FE+M GFKP+ V++V +LSACSHAGLV+EG
Sbjct: 324 SQRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDEGL 383
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRM 593
FD + R+ I+ + +H+AC+VDL GRAG L+EA D +K + + ++ +WG LL C
Sbjct: 384 NYFDELGRDNSIQLREDHHACLVDLCGRAGRLKEAYDFIKQLGTKASSSIWGGLLAGCNA 443
Query: 594 HKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
H + ++ + A ++ E G+Y+LLSNIYA+ +W +A++VR+ K KGLKK G S
Sbjct: 444 HGDLEIGQLAAKELEKEDPENAGTYLLLSNIYASGRKWREASRVRLKMKEKGLKKQPGCS 503
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
WIEV ++H+F + + + ++ ++ +M+ + VP+ND +
Sbjct: 504 WIEVGNRVHVFLARDKSHYQSNLIYSLVHDIHAEMKAEH-VPNNDFV 549
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 211/437 (48%), Gaps = 47/437 (10%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+LS Y R R+ +A +FE P + + WN+++ N + A++++ +M + +
Sbjct: 44 MLSGYVRLKRIEEAERLFEVMPV---KNVVSWNTMIDGYGKNREVDKAIEVFERMHERNM 100
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFS---FGQIVHNHVLQMGF-----------------Q 168
+ +++ C + R RF ++ + MG +
Sbjct: 101 VSWNAVIAALVQ-CGRVEEARRRFDEMPKRDVISWTTMVMGLARSGRVDEARKVFDRMPE 159
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
NV N ++ YAK ++ ++F LF+++ +N SWN M +GF N + A ++F M
Sbjct: 160 RNVVSWNAMVTGYAKNMRLDEAFDLFERMPERNLSSWNTMITGFIQNGELAWARKVFNEM 219
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAA 287
E N V+WT++++ + + G E + +F +M++ G VL C+D+A
Sbjct: 220 P----EKNVVSWTTMITGYVQEGESESALKVFVEMIKDGGARPNEGTFVNVLGACSDMAG 275
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE--IEEKNIVSWNALI 345
G+ +H + K ++D FV +AL+ +Y K G++ +A+ +F + I ++++V WN +I
Sbjct: 276 LGEGQQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDVVISQRDLVLWNGMI 335
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+YA G EA+E+F ++ L +PN +S+ ++ A + G +E L+ F ++
Sbjct: 336 AAYAHHGCGMEAIELFEDMQGLGF----KPNDVSYVELLSACSHAGLVDEGLNYFDELGR 391
Query: 406 AKVVANSVTI-----SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
NS+ + + L+ +C + L +E + + ++ + + GLL
Sbjct: 392 ----DNSIQLREDHHACLVDLCGRAGRL---KEAYDFIKQLGTKASSSIWGGLLAGCNAH 444
Query: 461 GCLEEGHLVFEQIEKKD 477
G LE G L +++EK+D
Sbjct: 445 GDLEIGQLAAKELEKED 461
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 151/330 (45%), Gaps = 78/330 (23%)
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
E + VTWT+++S + +CG + + LFD + +AI V++ A L+
Sbjct: 3 ERDVVTWTAVISGYIKCGLIVDARRLFDRV---------DAIKDVVTWTAMLSG------ 47
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
YV +K ++ A+ LF + KN+VSWN +I Y +
Sbjct: 48 ------------YVRLKR-----------IEEAERLFEVMPVKNVVSWNTMIDGYGKNRE 84
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
D+A+EVF + M N++SW+AVI A GR EEA F +M V++ +
Sbjct: 85 VDKAIEVFER--------MHERNMVSWNAVIAALVQCGRVEEARRRFDEMPKRDVISWTT 136
Query: 414 TISGLLSVCAESAALNIGREIHGHVVR---VSMN------------------------KN 446
+ GL A S ++ R++ + VS N +N
Sbjct: 137 MVMGL----ARSGRVDEARKVFDRMPERNVVSWNAMVTGYAKNMRLDEAFDLFERMPERN 192
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI- 505
+ N ++ +++ G L VF ++ +K++++W +MI+GY G E+AL F EMI
Sbjct: 193 LSSWNTMITGFIQNGELAWARKVFNEMPEKNVVSWTTMITGYVQEGESESALKVFVEMIK 252
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
+ G +P+ FV VL ACS + EG+++
Sbjct: 253 DGGARPNEGTFVNVLGACSDMAGLGEGQQV 282
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 440 RVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALA 499
RV K+++ +L+ Y++ +EE +FE + K++++WN+MI GYG N + A+
Sbjct: 31 RVDAIKDVVTWTAMLSGYVRLKRIEEAERLFEVMPVKNVVSWNTMIDGYGKNREVDKAIE 90
Query: 500 TFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLL 559
FE M E V++ AV++A G V E RR FD M + I + MV L
Sbjct: 91 VFERMHERNM----VSWNAVIAALVQCGRVEEARRRFDEMPKRDVIS-----WTTMVMGL 141
Query: 560 GRAGLLQEASDIVKNMPMEPNAYVWGTLLN----SCRMHKNTDVAEAMASQ 606
R+G + EA + MP E N W ++ + R+ + D+ E M +
Sbjct: 142 ARSGRVDEARKVFDRMP-ERNVVSWNAMVTGYAKNMRLDEAFDLFERMPER 191
Score = 42.7 bits (99), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 99/228 (43%), Gaps = 20/228 (8%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++L C + L +QVH + + F+A+ +L++Y++ G L AR +F+
Sbjct: 263 FVNVLGACSDMAGLGEGQQVHLLISKSVYQDRTFVASALLNMYSKCGELSIARKIFDDVV 322
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ +LWN ++ +G A++L+ M+ LG + ++ ++ AC G
Sbjct: 323 I-SQRDLVLWNGMIAAYAHHGCGMEAIELFEDMQGLGFKPNDVSYVELLSACSHAGLVDE 381
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNE----LIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
N+ ++G ++ + + L+ + + G++ +++ ++ K S
Sbjct: 382 GL-------NYFDELGRDNSIQLREDHHACLVDLCGRAGRLKEAYDFIKQLGTKASSS-- 432
Query: 207 MMFSGFALNFDCDGALEL--FKRMELEGLEPNFVTWTSLLSSHARCGR 252
++ G + G LE+ ELE +P LLS+ GR
Sbjct: 433 -IWGGLLAGCNAHGDLEIGQLAAKELEKEDPENAGTYLLLSNIYASGR 479
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 193/666 (28%), Positives = 334/666 (50%), Gaps = 57/666 (8%)
Query: 46 QLKQVHNQLI---VTGANASAFL---AARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
LKQ+H Q++ T N + L A + ++ + L A +VF P +
Sbjct: 31 HLKQIHAQILHSNTTPENTNTLLSKLALSICTLSSSSSSLHYALSVFSQIP---NPHTHF 87
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLG-DGFTFPLVIRACKFMGSFRFRFSFGQIV 158
N +LR + E + LY +R + D F+FP +++A + +F + G +
Sbjct: 88 SNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAF----NHGLEI 143
Query: 159 HNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
H ++GF + I LI MYA ++ D+ LFDK+
Sbjct: 144 HGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKM--------------------- 182
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
P+ V W ++ + + G ++ + LF+ MR ++ + + V
Sbjct: 183 --------------CHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTV 228
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
LS C G+ IH FV G+ ++ ALI +Y G + +A+ ++ + K++
Sbjct: 229 LSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHL 288
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
+ A+++ YA+ G+ +A +F Q+ +ER +++ WSA+I +A + + +EAL
Sbjct: 289 IVSTAMLSGYAKLGMVKDARFIFDQM-------IER-DLVCWSAMISGYAESDQPQEALK 340
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
LF +M + V + +T+ ++S C+ AL IH +V R + + V N L++MY
Sbjct: 341 LFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYA 400
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
KCG L + VFE + +K++I+W+SMI+ + M+G ++A+ F M E +P+GV F+
Sbjct: 401 KCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIG 460
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
VL AC HAGLV EG ++F M+ E I P EHY CMVDL RA L++A ++++ MP
Sbjct: 461 VLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFA 520
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
PN +WG+L+++C++H ++ E A ++ L + G+ ++LSNIYA RW D +R
Sbjct: 521 PNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIR 580
Query: 639 ISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
S KG+ K S IE+ ++HMF + + E L+E+ +++ G P
Sbjct: 581 KSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKLKLVGYKPSTS 640
Query: 699 IILWEM 704
IL ++
Sbjct: 641 GILIDL 646
>gi|62733531|gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa Japonica Group]
Length = 888
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 188/583 (32%), Positives = 310/583 (53%), Gaps = 21/583 (3%)
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
G + DA ++ P S + +++ V N L ++AL ++ +M GV + T
Sbjct: 193 GSVRDAVELYRQCPL---CSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLV 249
Query: 137 LVIRACKFMGSFRFRFSF-GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
VI+AC G F S G + +++L N+ + N LI +Y + G + ++FD
Sbjct: 250 SVIKACIGAGEFDLAMSIVGLAMKSNLLD----KNLGVRNSLITLYLRKGDADAARRMFD 305
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ V++ +SW + +A D +GA + M E N V+W +L++ H + G +E
Sbjct: 306 EMEVRDVVSWTALLDVYAELGDLEGARRVLDEMP----ERNEVSWGTLVARHEQKGNAKE 361
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
+ L+ M G + VL CA L G+ IH +K + VFV +ALI
Sbjct: 362 AVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALID 421
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
+Y K + AQ +F + +KNIV WN+LI+ Y+ EA E+F + M
Sbjct: 422 MYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKK--------MPAR 473
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH 435
NV SW+++I +A N + +AL F M + +T S +L CA +L +G+ +H
Sbjct: 474 NVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVH 533
Query: 436 GHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
++++ + ++I V L +MY K G L+ VF ++ K++ + W +MI G NG E
Sbjct: 534 AKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAE 593
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
++ FE+MI AG P+ F+A+L ACSH+GLV F+MM + I P+ +HY CM
Sbjct: 594 ESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMM-QACGISPKAKHYTCM 652
Query: 556 VDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETT 615
VD+L RAG L EA D++ + + A W LL++C +++N ++ E A ++ L + T
Sbjct: 653 VDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNT 712
Query: 616 GSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
Y+LLSN+YA+ G+W+DAA++RI K LKK G SW++++
Sbjct: 713 AGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIR 755
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 197/445 (44%), Gaps = 46/445 (10%)
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN 236
++ + K G + + +LFD + ++ +S+ M A+EL+++ L + P
Sbjct: 154 MVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSV-PF 212
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
F T++++ ++ + +F M G+ + V+ C + I G
Sbjct: 213 F---TAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVG 269
Query: 297 FVIKGGFEDY-VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
+K D + V+N+LI +Y + GD A+ +F E+E +++VSW AL+ YAE G +
Sbjct: 270 LAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLE 329
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
A V + M N +SW ++ G +EA+ L+ +M N
Sbjct: 330 GARRVLDE--------MPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCF 381
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
S +L CA L GR+IH ++++ + N+ V + L++MY KC L + ++F + +
Sbjct: 382 SSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQ 441
Query: 476 KDLITWNSMISGYGMN--------------------------GLGEN-----ALATFEEM 504
K+++ WNS+ISGY N G +N AL +F M
Sbjct: 442 KNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAM 501
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+ +G P + F +VL AC+ + G+ + +++ I+ + + D+ ++G
Sbjct: 502 LASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIK-LGIKESIFVGTALSDMYAKSGD 560
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLN 589
L + + MP N W ++
Sbjct: 561 LDSSKRVFYEMPKR-NDVAWTAMIQ 584
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 169/378 (44%), Gaps = 45/378 (11%)
Query: 31 LDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
+ CF +L C ++ L+ ++HNQ + + + F+++ ++ +Y + +L DA+ +F
Sbjct: 378 ISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFY 437
Query: 88 TAP---FDCKSSSL-------------------------LWNSILRVNVSNGLYENALKL 119
+ P C +S + WNSI+ N + +ALK
Sbjct: 438 SLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKS 497
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
+ M G TF V+ AC + S G++VH ++++G + ++ + L
Sbjct: 498 FHAMLASGQSPGEITFSSVLLACASLCSLE----MGKMVHAKIIKLGIKESIFVGTALSD 553
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MYAK G + S ++F ++ +N ++W M G A N + ++ LF+ M G+ PN T
Sbjct: 554 MYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQT 613
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK---VIHG 296
+ ++L + + G +E M F+MM+ GI A+ ++ V A A H+ + ++
Sbjct: 614 FLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLAR--AGHLAEAEDLLLK 671
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
K + + +A K + A+ L E+++ N + L YA G +
Sbjct: 672 IESKSEANSWAALLSACNIYRNKEMGERAAKRL-QELDKDNTAGYVLLSNMYASCGKWKD 730
Query: 357 AVEVFSQLE----KLDGG 370
A E+ ++ K DGG
Sbjct: 731 AAEMRILMKGINLKKDGG 748
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 151/329 (45%), Gaps = 50/329 (15%)
Query: 301 GGFEDYV--------FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
G F D V F + ++ + K GD+ A+ LF + E+++VS+ ++ + + G
Sbjct: 134 GAFRDCVSVVGAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRG 193
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+AVE++ Q +V ++A+I F N ++AL +F +M V N
Sbjct: 194 SVRDAVELYRQCPLC--------SVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNE 245
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVS-MNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
+T+ ++ C + ++ I G ++ + ++KN+ V+N L+ +Y++ G + +F+
Sbjct: 246 ITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFD 305
Query: 472 QIEKKDLITWNSMISGYG-------------------------------MNGLGENALAT 500
++E +D+++W +++ Y G + A++
Sbjct: 306 EMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSL 365
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
+ +M+ G +P+ F +VL AC+ + GR+I + ++ + + ++D+
Sbjct: 366 YSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLK-MACSNNVFVSSALIDMYC 424
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ L +A I ++P + N W +L++
Sbjct: 425 KCKQLPDAQMIFYSLP-QKNIVCWNSLIS 452
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 199/668 (29%), Positives = 325/668 (48%), Gaps = 86/668 (12%)
Query: 40 QCKTIHQLKQVHNQLIVTGANA-SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSL 98
QC + + H Q+I T N +F+ ++++Y++ R A+ + P S +
Sbjct: 20 QCSRLG--RAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTP---NRSVV 74
Query: 99 LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIV 158
W +++ +V NG + +AL + MR+ + + FTFP +A GS R G+ V
Sbjct: 75 TWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKAS---GSLRSPL-VGKQV 130
Query: 159 HNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
H ++ G +V + MY+K G ++ K+FD++
Sbjct: 131 HALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMP-------------------- 170
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
E N TW + LS+ GR ++ + F R G E
Sbjct: 171 ---------------ERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAF 215
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
L+ CA + +G+ +HGFV++ GFE V V N LI YGK V ++ +FS I
Sbjct: 216 LNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGIS---- 271
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
+PN +SW ++I ++ N E+A
Sbjct: 272 -----------------------------------KPNDVSWCSMIVSYVQNDEEEKACL 296
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
+F + + + +S +LS CA + L +G+ +H V+ + NI V + L++MY
Sbjct: 297 VFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYG 356
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK--PDGVAF 516
KCG +E+ F+++ +++L+TWN+MI GY G + A+ F+EM + P+ V F
Sbjct: 357 KCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTF 416
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
V VLSACS AG VN G IF+ M + IEP EHYAC+VDLLGRAG++++A +K MP
Sbjct: 417 VCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMP 476
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAK 636
+ P VWG LL + +M +++ + A +F L +G+++LLSN++AA+GRWE+A
Sbjct: 477 IRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATL 536
Query: 637 VRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
VR K G+KK AG SWI +H+F + ++ + +L +L +ME G +PD
Sbjct: 537 VRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRGEMEAAGYIPD 596
Query: 697 NDIILWEM 704
L+++
Sbjct: 597 TSFALFDL 604
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 322 bits (825), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 180/640 (28%), Positives = 317/640 (49%), Gaps = 81/640 (12%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H + TG S F+ + +L +Y + G + + VF+ P +++ W +++ V
Sbjct: 138 LHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMP---TRNAVTWTAVITGLVR 194
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
G E L + M + V D + + + ++A G+ + G+ +H L+ GF
Sbjct: 195 AGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGAL----NHGRSIHTQTLKKGFDE 250
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
N + N L MY K G++ F K+R + +S
Sbjct: 251 NSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVS------------------------- 285
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
WT++++++ + G+ + + F MR + + V+S CA+ A
Sbjct: 286 ----------WTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLK 335
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
G+ +H V+ GF + + V N+++ +Y K G++ +F
Sbjct: 336 WGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFC------------------ 377
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
SM+ ++I+WS +I A++ G GEEA + +M+
Sbjct: 378 ---------------------SMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPK 416
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
N ++ +LSVC A L G+++H HV+ V + + +V + L+ MY KCG + E +
Sbjct: 417 PNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKI 476
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F K D+I+W +MISGY +G + A+ FE + + G +PD V F+ VL+ACSHAG+V
Sbjct: 477 FMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMV 536
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ G F+ M +++ I P EHY CM+DLL RAG L +A ++++MP++ + VW TLL
Sbjct: 537 DLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLR 596
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
+CR+H + D + A+++ L G+++ L+NI+AA G+W++AA +R+ K+KG+ K
Sbjct: 597 ACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKE 656
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
G S ++VK + F SG+ +++ +LEELA ME
Sbjct: 657 PGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGME 696
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 218/503 (43%), Gaps = 83/503 (16%)
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL 129
L I + L DAR++F+ P + + W +I+ V++ AL+L+ KMR L
Sbjct: 56 LKILVKTNHLKDARDLFDQLP---QRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112
Query: 130 G-DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D F L ++ C + +G +H ++ G +V + + L+ MY K+G++
Sbjct: 113 RIDPFLLSLGLKTC----GLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIG 168
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
S K+FD++ +N ++W + +G
Sbjct: 169 RSCKVFDEMPTRNAVTWTAVITGL-----------------------------------V 193
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
R G E + F M + +E + A A+ L AD A + G+ IH +K GF++ F
Sbjct: 194 RAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSF 253
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V N+L +Y K G + + F ++ ++VSW ++T+Y + G D ++ F ++
Sbjct: 254 VANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMR--- 310
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
ASN V+ N T S ++S CA A L
Sbjct: 311 -------------------ASN-----------------VIPNEYTFSAVISCCANFARL 334
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
G ++H HV+ V + V N ++ +Y KCG L VF ++ +D+ITW+++I+ Y
Sbjct: 335 KWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAY 394
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
G GE A M G KP+ A +VLS C ++ +G+++ V +E
Sbjct: 395 SQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLH-AHVLSVGLEQT 453
Query: 549 MEHYACMVDLLGRAGLLQEASDI 571
+ ++ + + G + EAS I
Sbjct: 454 SMVCSALIIMYAKCGSIAEASKI 476
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 167/357 (46%), Gaps = 48/357 (13%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFDCKSSSLLWNSILRV 106
+ +H Q + G + ++F+A + ++Y + G+L + F + D S W +I+
Sbjct: 237 RSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVS----WTTIVTA 292
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
+ G + L+ + +MR V+ + +TF VI C R +G+ +H HVL +G
Sbjct: 293 YIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFA----RLKWGEQLHAHVLCVG 348
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F + + N ++ +Y+K G+++ K+F ++ ++ I+W+ + + ++ + A E
Sbjct: 349 FVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLS 408
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
RM EG +PN A+A VLSVC +A
Sbjct: 409 RMRSEGPKPNEF-----------------------------------ALASVLSVCGSMA 433
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
GK +H V+ G E V +ALI +Y K G + A +F + + +I+SW A+I+
Sbjct: 434 ILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMIS 493
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
YAE G EA+E+F ++K+ RP+ +++ V+ A + G + F M
Sbjct: 494 GYAEHGHSQEAIELFENIQKVG----LRPDSVTFIGVLTACSHAGMVDLGFYYFNSM 546
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 10/235 (4%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++ C +LK Q+H ++ G + +A ++++Y++ G L VF +
Sbjct: 321 FSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMK 380
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
F + W++I+ G E A + +MR G + F V+ C M
Sbjct: 381 F---RDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQ 437
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H HVL +G + + + LI MYAK G ++++ K+F + ISW M S
Sbjct: 438 ----GKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMIS 493
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
G+A + A+ELF+ ++ GL P+ VT+ +L++ + G ++ F+ M K
Sbjct: 494 GYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSK 548
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 322 bits (825), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 217/737 (29%), Positives = 371/737 (50%), Gaps = 79/737 (10%)
Query: 19 RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGR 78
RP +T+++ L C + + K VH +LI + L ++S+Y++ G
Sbjct: 58 RPMDSVTFSSLLKSCI-----RARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGD 112
Query: 79 LFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLV 138
L A++VFET K + W++++ +NG +A+KL+V+ ++G++ + + + V
Sbjct: 113 LTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAV 172
Query: 139 IRACK---FMGSFRFRFSFGQIVHNHVLQMG-FQGNVHIVNELIGMYAK-MGQMSDSFKL 193
IRAC F+G G+++ +++ G F+ +V + LI M+ K +++K+
Sbjct: 173 IRACSNSDFVG-------VGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKV 225
Query: 194 FDKVRVKNYISWNMMFS-----GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
FDK+ N ++W +M + GF A+ F M L G E + T +S+ S+ A
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPRE-----AIRFFLDMVLSGFESDKFTLSSVFSACA 280
Query: 249 RCGRLEETMDLFDMMRKRGI--EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY 306
L L + G+ +V + + AD + D KV +D+
Sbjct: 281 ELENLSLGRQLHSWAIRSGLADDVECSLVDMYAKCSADGSVDDCRKVFDRM------QDH 334
Query: 307 -VFVKNALICVYGKHGDVKV-AQNLFSEIEEKNIVSWNALITSYA--------------- 349
V ALI Y ++ ++ A NLFSE+ + V N S A
Sbjct: 335 SVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQ 394
Query: 350 ------EAGL----------------CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+ GL CD + + E S+ N++S++ +
Sbjct: 395 VLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFE-----SLSEKNLVSYNTFLDGT 449
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
N E A +L ++ ++ ++ T + LLS A +L G +IH V+++ ++ N
Sbjct: 450 CRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQ 509
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
V N L++MY KCG ++ VF ++ +++I+W SMI+G+ +G E L TF +M +
Sbjct: 510 PVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKE 569
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
G KP+ V +VA+LSACSH GLV+EG R F+ M + +I+P+MEHYACMVDLL RAGLL +
Sbjct: 570 GVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTD 629
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A + + MP + + VW T L +CR+H NT++ + A +I +Y+ LSNIYA+
Sbjct: 630 AFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYAS 689
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
+G+WE++ ++R K + L K G SWIEV K+H F G++ + + + L+ L +
Sbjct: 690 AGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIYDELDWLITE 749
Query: 688 MENKGCVPDNDIILWEM 704
++ G VPD D++L ++
Sbjct: 750 IKRCGYVPDTDLVLHKL 766
>gi|222625627|gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
Length = 950
Score = 322 bits (825), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 188/583 (32%), Positives = 310/583 (53%), Gaps = 21/583 (3%)
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
G + DA ++ P S + +++ V N L ++AL ++ +M GV + T
Sbjct: 193 GSVRDAVELYRQCPL---CSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLV 249
Query: 137 LVIRACKFMGSFRFRFSF-GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
VI+AC G F S G + +++L N+ + N LI +Y + G + ++FD
Sbjct: 250 SVIKACIGAGEFDLAMSIVGLAMKSNLLD----KNLGVRNSLITLYLRKGDADAARRMFD 305
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ V++ +SW + +A D +GA + M E N V+W +L++ H + G +E
Sbjct: 306 EMEVRDVVSWTALLDVYAELGDLEGARRVLDEMP----ERNEVSWGTLVARHEQKGNAKE 361
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
+ L+ M G + VL CA L G+ IH +K + VFV +ALI
Sbjct: 362 AVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALID 421
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
+Y K + AQ +F + +KNIV WN+LI+ Y+ EA E+F + M
Sbjct: 422 MYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKK--------MPAR 473
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIH 435
NV SW+++I +A N + +AL F M + +T S +L CA +L +G+ +H
Sbjct: 474 NVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVH 533
Query: 436 GHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGE 495
++++ + ++I V L +MY K G L+ VF ++ K++ + W +MI G NG E
Sbjct: 534 AKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAE 593
Query: 496 NALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACM 555
++ FE+MI AG P+ F+A+L ACSH+GLV F+MM + I P+ +HY CM
Sbjct: 594 ESILLFEDMISAGITPNEQTFLAILFACSHSGLVEHAMHYFEMM-QACGISPKAKHYTCM 652
Query: 556 VDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETT 615
VD+L RAG L EA D++ + + A W LL++C +++N ++ E A ++ L + T
Sbjct: 653 VDVLARAGHLAEAEDLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNT 712
Query: 616 GSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
Y+LLSN+YA+ G+W+DAA++RI K LKK G SW++++
Sbjct: 713 AGYVLLSNMYASCGKWKDAAEMRILMKGINLKKDGGCSWVQIR 755
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 196/441 (44%), Gaps = 46/441 (10%)
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
+ K G + + +LFD + ++ +S+ M A+EL+++ L + P F
Sbjct: 158 HVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSV-PFF--- 213
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
T++++ ++ + +F M G+ + V+ C + I G +K
Sbjct: 214 TAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMK 273
Query: 301 GGFEDY-VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
D + V+N+LI +Y + GD A+ +F E+E +++VSW AL+ YAE G + A
Sbjct: 274 SNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARR 333
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
V + M N +SW ++ G +EA+ L+ +M N S +L
Sbjct: 334 VLDE--------MPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVL 385
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
CA L GR+IH ++++ + N+ V + L++MY KC L + ++F + +K+++
Sbjct: 386 GACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIV 445
Query: 480 TWNSMISGYGMN--------------------------GLGEN-----ALATFEEMIEAG 508
WNS+ISGY N G +N AL +F M+ +G
Sbjct: 446 CWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASG 505
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
P + F +VL AC+ + G+ + +++ I+ + + D+ ++G L +
Sbjct: 506 QSPGEITFSSVLLACASLCSLEMGKMVHAKIIK-LGIKESIFVGTALSDMYAKSGDLDSS 564
Query: 569 SDIVKNMPMEPNAYVWGTLLN 589
+ MP + N W ++
Sbjct: 565 KRVFYEMP-KRNDVAWTAMIQ 584
Score = 100 bits (248), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 169/378 (44%), Gaps = 45/378 (11%)
Query: 31 LDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE 87
+ CF +L C ++ L+ ++HNQ + + + F+++ ++ +Y + +L DA+ +F
Sbjct: 378 ISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFY 437
Query: 88 TAP---FDCKSSSL-------------------------LWNSILRVNVSNGLYENALKL 119
+ P C +S + WNSI+ N + +ALK
Sbjct: 438 SLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKS 497
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
+ M G TF V+ AC + S G++VH ++++G + ++ + L
Sbjct: 498 FHAMLASGQSPGEITFSSVLLACASLCSLE----MGKMVHAKIIKLGIKESIFVGTALSD 553
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
MYAK G + S ++F ++ +N ++W M G A N + ++ LF+ M G+ PN T
Sbjct: 554 MYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGITPNEQT 613
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK---VIHG 296
+ ++L + + G +E M F+MM+ GI A+ ++ V A A H+ + ++
Sbjct: 614 FLAILFACSHSGLVEHAMHYFEMMQACGISPKAKHYTCMVDVLAR--AGHLAEAEDLLLK 671
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
K + + +A K + A+ L E+++ N + L YA G +
Sbjct: 672 IESKSEANSWAALLSACNIYRNKEMGERAAKRL-QELDKDNTAGYVLLSNMYASCGKWKD 730
Query: 357 AVEVFSQLE----KLDGG 370
A E+ ++ K DGG
Sbjct: 731 AAEMRILMKGINLKKDGG 748
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 156/342 (45%), Gaps = 52/342 (15%)
Query: 301 GGFEDYV--------FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
G F D V F + ++ + K GD+ A+ LF + E+++VS+ ++ + + G
Sbjct: 134 GAFRDCVSVVGAASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRG 193
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+AVE++ Q +V ++A+I F N ++AL +F +M V N
Sbjct: 194 SVRDAVELYRQCPLC--------SVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNE 245
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVS-MNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
+T+ ++ C + ++ I G ++ + ++KN+ V+N L+ +Y++ G + +F+
Sbjct: 246 ITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFD 305
Query: 472 QIEKKDLITWNSMISGYG-------------------------------MNGLGENALAT 500
++E +D+++W +++ Y G + A++
Sbjct: 306 EMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSL 365
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
+ +M+ G +P+ F +VL AC+ + GR+I + ++ + + ++D+
Sbjct: 366 YSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLK-MACSNNVFVSSALIDMYC 424
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
+ L +A I ++P + N W +L++ N+ + EA
Sbjct: 425 KCKQLPDAQMIFYSLP-QKNIVCWNSLISG--YSNNSKMVEA 463
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 190/655 (29%), Positives = 337/655 (51%), Gaps = 81/655 (12%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H G + +AF+ + ++ Y+ G + AR VF+ + ++ W +++
Sbjct: 172 IHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIW---KDAVTWTAMVSCYSE 228
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
N + E+AL + KMR G + F V++A + S G+ +H ++
Sbjct: 229 NDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSA----VLGKGIHGCAVKTLCDT 284
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
H+ L+ MYAK G + D+ +F+ +
Sbjct: 285 EPHVGGALLDMYAKCGYIEDARTVFEIIP------------------------------- 313
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
+ + W+ L+S +A+ + E+ ++F M + + +++ VL CA++A
Sbjct: 314 ----HDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLD 369
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+G+ IH VIK G+E +FV NAL+ VY K +N+
Sbjct: 370 LGQQIHNLVIKLGYESELFVGNALMDVYAK------CRNM-------------------- 403
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+ ++E+F S+ N +SW+ +I + +G E+AL +F++M+ A V+
Sbjct: 404 -----ENSLEIFR--------SLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVL 450
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
+ VT S +L CA +A++ +IH + + + N + +V N L++ Y KCGC+ + V
Sbjct: 451 STQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKV 510
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
FE I + D+++WN++ISGY ++G +AL F M ++ KP+ V FVA+LS C GLV
Sbjct: 511 FESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLV 570
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
N+G +F+ M + RI+P M+HY C+V LLGRAG L +A + ++P P+ VW LL+
Sbjct: 571 NQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLS 630
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
SC +HKN + + A ++ + + +Y+LLSN+YAA+G + A +R S + G+KK
Sbjct: 631 SCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKE 690
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G SW+E+K ++H FS G++ D++ + +LE L L+ +G VPD +++L ++
Sbjct: 691 VGLSWVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDV 745
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 123/540 (22%), Positives = 229/540 (42%), Gaps = 114/540 (21%)
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG--FQGNVHIVNELIGMYAKMGQMS 188
D + +++ C G R G+ VH V+Q G Q + N L+ +YAK+G ++
Sbjct: 46 DSYACARLLQRCIARGDARA----GRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLA 101
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ +LFD + E N V++ +L+ +A
Sbjct: 102 AARRLFDGMP-----------------------------------ERNMVSFVTLVQGYA 126
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
G EE LF +++ G EV + +L V + A + IH K G + F
Sbjct: 127 LRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAF 186
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V ++LI Y G V A+ +F I K+ V+W A+++ Y+E + ++A+ FS++
Sbjct: 187 VGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRM-- 244
Query: 369 GGSMERPNVIS---------WSAVIGA------------------------FASNGRGEE 395
G+ P V++ SAV+G +A G E+
Sbjct: 245 AGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIED 304
Query: 396 ALDLFR-------------------------------KMQLAKVVANSVTISGLLSVCAE 424
A +F +M + VV N ++SG+L CA
Sbjct: 305 ARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACAN 364
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
A L++G++IH V+++ + V N L+++Y KC +E +F + + ++WN++
Sbjct: 365 VAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTI 424
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I GY +G E+AL+ F+EM A V F +VL AC++ + +I ++ +
Sbjct: 425 IVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKS-- 482
Query: 545 IEPQMEHYAC--MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH-KNTDVAE 601
+ C ++D + G +++A + +++ ++ + W +++ +H + TD E
Sbjct: 483 -TFNNDTIVCNSLIDTYAKCGCIRDALKVFESI-IQCDVVSWNAIISGYALHGRATDALE 540
Score = 139 bits (349), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 117/513 (22%), Positives = 228/513 (44%), Gaps = 57/513 (11%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K +H + T + + +L +YA+ G + DAR VFE P D +LW+ ++
Sbjct: 271 KGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHD---DVILWSFLISRY 327
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
+ E A +++++M + V+ + F+ V++AC + GQ +HN V+++G+
Sbjct: 328 AQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFL----DLGQQIHNLVIKLGY 383
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ + + N L+ +YAK M +S ++F +R
Sbjct: 384 ESELFVGNALMDVYAKCRNMENSLEIFRSLR----------------------------- 414
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
+ N V+W +++ + + G E+ + +F MR + + VL CA+ A+
Sbjct: 415 ------DANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTAS 468
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
IH + K F + V N+LI Y K G ++ A +F I + ++VSWNA+I+
Sbjct: 469 IKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISG 528
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
YA G +A+E+F+++ K D +PN +++ A++ S G + L LF M +
Sbjct: 529 YALHGRATDALELFNRMNKSD----TKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDH 584
Query: 408 VVANSVT-ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
+ S+ + ++ + + LN + G + + +V LL+ + + G
Sbjct: 585 RIKPSMDHYTCIVRLLGRAGRLNDALKFIGD---IPSTPSPMVWRALLSSCVVHKNVALG 641
Query: 467 HLVFE---QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD-GVAFVAV--- 519
E +IE +D T+ + + Y G+ + + M G K + G+++V +
Sbjct: 642 KFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGE 701
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
+ A S + RI + M+ ++ E Y
Sbjct: 702 VHAFSVGSADHPDMRIINAMLEWLNLKASREGY 734
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 109/246 (44%), Gaps = 17/246 (6%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C +K Q+H+ + + N + ++ YA+ G + DA VFE+
Sbjct: 456 FSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESI- 514
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
C S WN+I+ +G +AL+L+ +M K + TF ++ C G
Sbjct: 515 IQCDVVS--WNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQ 572
Query: 151 RFS-FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF-DKVRVKNYISWNMM 208
S F + +H ++ IV L+G + G+++D+ K D + + W +
Sbjct: 573 GLSLFNSMTMDHRIKPSMDHYTCIV-RLLG---RAGRLNDALKFIGDIPSTPSPMVWRAL 628
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRG 267
S ++ + AL F ++ +EP T LLS+ +A G L++ L MR G
Sbjct: 629 LSSCVVHKNV--ALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIG 686
Query: 268 I--EVG 271
+ EVG
Sbjct: 687 VKKEVG 692
>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 215/765 (28%), Positives = 379/765 (49%), Gaps = 109/765 (14%)
Query: 32 DCFDHLLQQC---KTIHQLKQVHNQLIVTGANASA--FLAARVLSIYARFGRLFDARNVF 86
D + LLQ C + + +Q+H +++ G + + ++ +++ Y++ A +F
Sbjct: 79 DVYGELLQGCVYERALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLF 138
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+ S W +I+ + G + AL + +M + G+L D F P+ +A G
Sbjct: 139 GKLQVQNEFS---WAAIMGLKSRMGFNQEALMGFREMHEYGLLLDNFVIPIAFKAS---G 192
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM-------------------------- 180
+ R+ FG+ VH +V++MG G +++ L+ M
Sbjct: 193 ALRW-IGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWN 251
Query: 181 -----YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA-----LNFDCDG----ALELFK 226
+ + G +++ + F ++RV+ + S F L+ +G AL +
Sbjct: 252 SMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDEGKQGHALAVLS 311
Query: 227 RMEL--------------------------EGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
+EL E LE + VTW L+S + G ++ +DL
Sbjct: 312 GLELTNILGSSLINFYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVHNGLVDRALDLC 371
Query: 261 DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
+M+ + + +A +++ AD +GK H F ++ E V V +++I +Y K
Sbjct: 372 HVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKC 431
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK-------------- 366
++ A+ +F +++++ WN L+ +YAE G E +++F Q++
Sbjct: 432 EKLECARRVFDATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVI 491
Query: 367 ---LDGGSMER--------------PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
L+ G +++ PN+I+W+ +I A NG G+EA F+ M+ A +
Sbjct: 492 LGLLNKGKVDQAKDTFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFLTFQSMEEAGIK 551
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
NS++IS LLS C+ A+L GR IH ++ R ++ + V L+NMY KCG + + V
Sbjct: 552 PNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYAKCGSINQAKRV 611
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F+ I KK+L +N+MISGY ++G AL+ F + E KPD + F ++LSAC HAGLV
Sbjct: 612 FDMILKKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTSILSACGHAGLV 671
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
EG +F MV +I Q EHY C+V +L R+ L EA I+ MP EP+A+++G+LL
Sbjct: 672 REGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRIILGMPFEPDAFIFGSLLA 731
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
+CR H + ++ E + ++ L + +G+Y+ LSN YAA+G W++A+KVR K + L K+
Sbjct: 732 ACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVRGLMKERSLSKI 791
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
G S I++ K H+F +G+ S K + +L L ++M+ C+
Sbjct: 792 PGHSLIQIGNKTHVFFAGDKSHSRTKEIYMMLALLRVEMQFTRCI 836
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 208/484 (42%), Gaps = 84/484 (17%)
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
++ ++ + +SS + G L E +DL + I +G + +L C A +G+ IH
Sbjct: 42 SYKSYLNHISSLCKQGHLLEALDLVTDLELEDITIGPDVYGELLQGCVYERALSLGQQIH 101
Query: 296 GFVIKGG--FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
G ++K G +++ L+ Y K + ++A LF
Sbjct: 102 GRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLF----------------------- 138
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
G ++ N SW+A++G + G +EAL FR+M ++ ++
Sbjct: 139 ----------------GKLQVQNEFSWAAIMGLKSRMGFNQEALMGFREMHEYGLLLDNF 182
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
I + G+ +H +VV++ + I V LL+MY KCG EE VF++I
Sbjct: 183 VIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKI 242
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
+K+++ WNSMI + NGL A+ TF EM G P V + LSA ++ +++EG+
Sbjct: 243 LEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDEGK 302
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRM 593
+ + V +E + +++ + GL+++A + M +E + W LL S +
Sbjct: 303 QGHALAVLS-GLELTNILGSSLINFYSKVGLVEDAELVFSEM-LEKDTVTW-NLLVSGYV 359
Query: 594 H-----KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
H + D+ M S+ + T L++I AA +A ++ LK
Sbjct: 360 HNGLVDRALDLCHVMQSENLRFDSVT------LASIMAA------------AADSRNLK- 400
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC-------VPDNDIIL 701
+ ++ H F N+L+SD+ +++ A + E C D+I+
Sbjct: 401 --------LGKEGHSFCVRNNLESDVAVASSIIDMYA-KCEKLECARRVFDATAKRDLIM 451
Query: 702 WEMM 705
W +
Sbjct: 452 WNTL 455
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 177/586 (30%), Positives = 305/586 (52%), Gaps = 51/586 (8%)
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
L+ + R+ G+ + F + RAC+ + R +H G + N L+
Sbjct: 33 LHRRFRE-GLWSEPGLFSHIFRACQALPLLR-------QLHAFAATSGAAADRFTANHLL 84
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
YA +G + LF+++ +N +SWN++ G+ N D + A +LF M N
Sbjct: 85 LAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPAR----NVA 140
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
TW ++++ G EE++ F MR+ G++ + + CA L G+ +H +V
Sbjct: 141 TWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYV 200
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
++ G + + V ++L +Y + G ++ + + NIVS N
Sbjct: 201 VRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNT--------------- 245
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
I NG E AL+ F M+ A V AN+VT
Sbjct: 246 ------------------------TISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSA 281
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
++ C++ AAL G++IH ++ ++K + V L++MY +CGCL + V + DL
Sbjct: 282 VTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDL 341
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
+ ++MIS YG +G G+ A+ F++M+ AG +P+ V F+ +L ACSH+GL +EG F++
Sbjct: 342 VLCSAMISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFEL 401
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTD 598
M + + ++P ++HY C+VDLLGR+G L EA D++ +MP++P+ +W TLL++C+ K D
Sbjct: 402 MTKTYGLQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFD 461
Query: 599 VAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
+AE +A ++ L + SY+LLSNI A S RWED +KVR + + + ++K G SW+E+K
Sbjct: 462 MAERIAERVIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELK 521
Query: 659 RKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+IH F +G+ S + + E LEE+ ++ G PD ++ +M
Sbjct: 522 GQIHQFCTGDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDM 567
Score = 110 bits (274), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 172/398 (43%), Gaps = 71/398 (17%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPF-- 91
F H+ + C+ + L+Q+H +GA A F A +L YA G AR +FE P
Sbjct: 48 FSHIFRACQALPLLRQLHAFAATSGAAADRFTANHLLLAYADLGDFPTARGLFERIPKRN 107
Query: 92 ---------------DCKSSSLL-----------WNSILRVNVSNGLYENALKLYVKMRK 125
D +++ L WN+++ ++GL E +L + MR+
Sbjct: 108 VMSWNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRR 167
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
G+ D + + R C R S G+ VH +V++ G ++ + + L MY + G
Sbjct: 168 EGMQPDEYGLGSLFRCC---AGLRDVVS-GRQVHAYVVRSGLDRDMCVGSSLAHMYMRCG 223
Query: 186 QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
+ D + N +S N SG N D +GALE F M G+E N VT+ S ++
Sbjct: 224 FLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVT 283
Query: 246 SHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
S C+DLAA G+ IH IK G +
Sbjct: 284 S-----------------------------------CSDLAALAQGQQIHALAIKTGVDK 308
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
V V +L+ +Y + G + ++ + E ++V +A+I++Y G +AV +F Q+
Sbjct: 309 VVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQM- 367
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+ G+ PN +++ ++ A + +G +E ++ F M
Sbjct: 368 -MAAGA--EPNEVTFLTLLYACSHSGLKDEGMNCFELM 402
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 7/218 (3%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+QVH ++ +G + + + + +Y R G L D P + + N+ +
Sbjct: 194 RQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALP---SLNIVSCNTTISGR 250
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
NG E AL+ + MR GV + TF + +C + + + GQ +H ++ G
Sbjct: 251 TQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAAL----AQGQQIHALAIKTGV 306
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
V ++ L+ MY++ G + DS ++ + + + + M S + + A+ LFK+
Sbjct: 307 DKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQ 366
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
M G EPN VT+ +LL + + G +E M+ F++M K
Sbjct: 367 MMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTK 404
>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
Length = 828
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 205/688 (29%), Positives = 348/688 (50%), Gaps = 66/688 (9%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+++H +++ +G + ++ +Y L DA+ VF+ C +LW+SI+
Sbjct: 122 RKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEM---CVRDLVLWSSIISCY 178
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
V NG+Y L+++ M G+ D V AC +G R S VH +V++ G
Sbjct: 179 VENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKS----VHGYVMREGM 234
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
G+ + N LI MY++ G + + +LF+ + ++ W M S + N + AL++F +
Sbjct: 235 VGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIK 294
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMD-----LFDMMRKRGIEVGAEAIAVVLSVC 282
M+ +EPN VT S+L+S AR GRL+E L + M G+++G A+ S C
Sbjct: 295 MQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGP-ALIDFYSAC 353
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS-- 340
+++ K++H G E+ V N LI Y + G A F+ + K I+
Sbjct: 354 WKMSSCE--KLLHSI----GNENIV-SWNTLISFYAREGLNDEAMAFFACMVAKGIMPDS 406
Query: 341 ------------------------------------WNALITSYAEAGLCDEAVEVFSQL 364
N+L+ Y++ G A +F+++
Sbjct: 407 FSLASSISASASSGSIQFGQQIHGHVMKRGFFDEFVQNSLMDMYSKCGFASSAYTIFNKI 466
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
+ ++++W+ +I F+ NG EAL LF +M ++ N VT + C+
Sbjct: 467 K--------HKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSN 518
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
L+ G+ IH ++ ++ + L++MY KCG L+ VF+ I +K +++W++M
Sbjct: 519 LGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTM 578
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I+ +G++G A + F +M+ + KP+ V F+ +LSAC HAG V EG+ F+ M +
Sbjct: 579 IAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYG 638
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
I P +EH+A +VDLL RAG + A +I+K++ A +WG LLN CR++ D+ E +A
Sbjct: 639 IVPNVEHFASIVDLLSRAGDINGAYEIIKSIRTPVAASIWGALLNGCRIYGRMDMIEYIA 698
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
++ G+ T+ TG Y LLSNIYA G W ++ KVR + GLKKV G S +E+ RKI+ F
Sbjct: 699 EELGGISTDDTGYYTLLSNIYAEGGNWYESRKVRSKMEGMGLKKVPGYSTVEIDRKIYRF 758
Query: 665 SSGNSLQSDLKNVCEVLEELALQMENKG 692
SG++ + +K +C LE + +G
Sbjct: 759 GSGDTSEWQMKEICMFLENFQSLAQEQG 786
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 133/572 (23%), Positives = 259/572 (45%), Gaps = 90/572 (15%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
L + C T+ +L Q+H L+VT + + + ++L Y++ G L +R VF T P
Sbjct: 7 LFRTCSTLRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHP---SPD 63
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLG---VLGDGFTFPLVIRACKFMGSFRFRFS 153
S +++ +++ ++ N L+ L L+ ++G F +P VIRA +G
Sbjct: 64 SFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVG----ELI 119
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H +L+ GF + I L+GMY ++ + D+ K+FD++ V++ + W+ + S +
Sbjct: 120 VGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYV 179
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
N LE+F+ M EG+ P+ V LLS CG++
Sbjct: 180 ENGVYREGLEMFRSMICEGIRPDSVM---LLSVAEACGKIG------------------- 217
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
C LA K +HG+V++ G + N+LI +Y + G + A+ LF I
Sbjct: 218 --------CLRLA-----KSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECI 264
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
++++ W ++I++Y + +EA++VF +++
Sbjct: 265 DDRSTSCWTSMISAYNQNECFEEALDVFIKMQD--------------------------- 297
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL-VQNG 452
++V N VT+ +L+ CA L G+ +H V+R +M L +
Sbjct: 298 ------------SEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPA 345
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++ Y C + + I +++++WN++IS Y GL + A+A F M+ G PD
Sbjct: 346 LIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPD 405
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
+ + +SA + +G + G++I +++ + +++ ++D+ + G A I
Sbjct: 406 SFSLASSISASASSGSIQFGQQIHGHVMKRGFFDEFVQN--SLMDMYSKCGFASSAYTIF 463
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
N + W ++ C +N EA++
Sbjct: 464 -NKIKHKSIVAWNCMI--CGFSQNGISVEALS 492
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 221/823 (26%), Positives = 382/823 (46%), Gaps = 165/823 (20%)
Query: 34 FDHLLQQC-----KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
F HL Q C + + H +++V+G + F++ +L +YAR G AR VF+
Sbjct: 5 FSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDV 64
Query: 89 APF-----------------DCKSSSLL-----------WNSILRVNVSNGLYENALKLY 120
P D +++ L WN++L G++ +++ L
Sbjct: 65 MPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLS 124
Query: 121 VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
V+M + GV D T ++++AC + + G +H ++ G + +V + L+ M
Sbjct: 125 VEMARRGVAPDRTTLAVLLKACGGLED----LALGVQIHAVAVKTGLEMDVRAGSALVDM 180
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL---EPNF 237
Y K + D+ + F + +N +SW +G N LELF +M+ GL +P +
Sbjct: 181 YGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAY 240
Query: 238 --------------------------------VTWTSLLSSHARCGRLEETMDLFDMMRK 265
V T+++ +A+ L + F +
Sbjct: 241 ASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPN 300
Query: 266 RGIE-------------VGAEAIAV------------------VLSVCADLAADHMGKVI 294
++ +GAEA+ + V S CA++ G +
Sbjct: 301 HTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQV 360
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
H IK GF+ V V+NA++ +YGK + A +F E+E+++ VSWNA+I + +
Sbjct: 361 HCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECY 420
Query: 355 DEAVEVFSQ----------------------LEKLDGGSMERPNVISWSAVIGAFASN-- 390
++ + ++ L+ L+ GS+ I + AF S+
Sbjct: 421 EDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTV 480
Query: 391 -------GRGEEALDLFRKMQLAKVVANSVTISG-------------------------- 417
G EA L ++ ++V+ + ISG
Sbjct: 481 VDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDH 540
Query: 418 -----LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
+L CA A + +G++IHG +++ M + + + L++MY KCG + + L+FE+
Sbjct: 541 FTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEK 600
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+K D ++WN+MI GY ++G G AL FE M +A P+ FVAVL ACSH GL+++G
Sbjct: 601 AQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDG 660
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
R F +M +++EPQ+EH+ACMVD+LGR+ QEA +++MP+E +A +W TLL+ C+
Sbjct: 661 CRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICK 720
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
+ ++ +VAE AS + L + + Y+LLSN+YA SG+W D ++ R + LKK G
Sbjct: 721 IRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGC 780
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
SWIEV+ ++H F +G+ + + V E+L L ++M+ G P
Sbjct: 781 SWIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEMKLSGYEP 823
Score = 148 bits (373), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/493 (24%), Positives = 211/493 (42%), Gaps = 82/493 (16%)
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
TF + + C G+ R + GQ H +L GF + N L+ MYA+ G + + +
Sbjct: 4 TFSHLYQLCA--GAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGV 61
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRL 253
FD + ++ +SWN M + +A D A LF M +P+ V+W +LLS + + G
Sbjct: 62 FDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMP----DPDVVSWNALLSGYCQRGMF 117
Query: 254 EETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
+++ L M +RG+ +AV+L C L +G IH +K G E V +AL
Sbjct: 118 RDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSAL 177
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ +YGK ++ A F + E+N VSW A I + +E+F Q+++L G +
Sbjct: 178 VDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRL-GLGVS 236
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
+P A+AS +FR CA L+ R+
Sbjct: 237 QP----------AYAS---------VFRS-------------------CAAITCLSTARQ 258
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+H H ++ + + +V ++++Y K L + F + + N+M+ G GL
Sbjct: 259 LHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGL 318
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHY 552
G AL F+ M +G D V+ V SAC+ +G ++ + ++ F ++ + +
Sbjct: 319 GAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRN- 377
Query: 553 ACMVDLLGRAGLLQEASDIVKNMP----------------------------------ME 578
++DL G+ L EA + + M ME
Sbjct: 378 -AILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGME 436
Query: 579 PNAYVWGTLLNSC 591
P+ + +G++L +C
Sbjct: 437 PDDFTYGSVLKAC 449
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 293/547 (53%), Gaps = 55/547 (10%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H ++ GF ++ +L+ Y G + ++ K+F+++ + WN M G + +
Sbjct: 37 IHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSET 96
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
+EL+ RM EPN T++ L+ AR L E
Sbjct: 97 PHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLRE---------------------- 134
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY---GKHGDVKVAQNLFSEIE 334
G+ +HG V+ G+ VFV+ +L+ +Y G + V+ A+ +F EI
Sbjct: 135 -------------GEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIV 181
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
++NIVSWN+L+ Y G D A +F + M NV+SW+ +I A GR +
Sbjct: 182 DRNIVSWNSLLAGYVRCGDVDGARRIFDE--------MPERNVVSWTTMIAGCAQIGRCK 233
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV--SMNKNILVQ-- 450
+AL LF +M+ A V + V + LS CAE L +G IH ++ + N+ +LV
Sbjct: 234 QALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLN 293
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF- 509
N L++MY CG +++ + VF ++++ I+W SMI+G+ G E AL F+ M G
Sbjct: 294 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTD 353
Query: 510 --KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
+PDG+ F+ VL ACSHAG V++GR F+ M +++ I P++EHY CMVDLL RAG L E
Sbjct: 354 EGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDE 413
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI-FGLITETTGSYM-LLSNIY 625
A ++++MPM+PN VWG LL CR+HKN ++A +A ++ L + Y+ LLSN+Y
Sbjct: 414 AHRLIESMPMKPNDAVWGALLGGCRIHKNAELASHVAQKLALELKPDQAAGYLVLLSNVY 473
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A + RW+D A VR G++K AG+SW+++ +H F +G+ +V E+L ++
Sbjct: 474 ATAKRWQDVALVRQKMVEIGVRKPAGRSWVQINGVVHDFVAGDWTHKHASSVYEMLSKIT 533
Query: 686 LQMENKG 692
Q + +G
Sbjct: 534 RQAKLEG 540
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 205/398 (51%), Gaps = 26/398 (6%)
Query: 13 SPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSI 72
SP+N +T +L F LLQ C TI +LKQ+H Q+IV G + FL ++LS
Sbjct: 7 SPAN-------LTGLRALQQHFFSLLQTCDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSF 59
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y G L +A VFE S+ +WN ++R + + ++LY +M + +
Sbjct: 60 YITSGNLLNAHKVFERIE---NPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNE 116
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG---QMSD 189
FT+ +I C R G+ VH V+ G+ NV + L+ +YA G +
Sbjct: 117 FTYSFLIGGCARSRLLR----EGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRK 172
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
+ ++FD++ +N +SWN + +G+ D DGA +F M E N V+WT++++ A+
Sbjct: 173 ARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMP----ERNVVSWTTMIAGCAQ 228
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK----GGFED 305
GR ++ + LF MR+ G+++ A+ LS CA+L +G IH ++ + G
Sbjct: 229 IGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPL 288
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
V + N+LI +Y G + A +F +++++ +SW ++IT +A+ G +EA+ VF ++
Sbjct: 289 LVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQ 348
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+L G RP+ I++ V+ A + G ++ F M
Sbjct: 349 RL-GTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECM 385
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
LL C L ++IH ++ ++ + LL+ Y+ G L H VFE+IE
Sbjct: 24 LLQTCDTIKKL---KQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPS 80
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
WN MI G+ + + + M+EA +P+ + ++ C+ + L+ EG ++
Sbjct: 81 TTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHG 140
Query: 538 MMV 540
+V
Sbjct: 141 RVV 143
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 309/622 (49%), Gaps = 84/622 (13%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFDCKSSSLLWNSILRV 106
+ VH +I G L ++ +Y++ DA VF D SL+ + R
Sbjct: 282 QAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRH 341
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
+++ A ++++M +GV + +TF + S + + +H H+++ G
Sbjct: 342 DMA----PEAFDIFMQMSDMGVKPNQYTF----VGLAIVASRTGDVNLCRSIHAHIVKSG 393
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F + + ++GMY K G + D+ FD ++ + SWN + SGF +C+ L +FK
Sbjct: 394 FSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFK 453
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
+ EG+ N T+ +L RC C L
Sbjct: 454 ELICEGVLANKYTYVGIL----RC-------------------------------CTSLM 478
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
G +H V+K GF+ GD V++ L+
Sbjct: 479 DLRFGCQVHACVLKSGFQ----------------GDYDVSK---------------MLLD 507
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
Y +AG A VF +L++ D V SW+ V+ +A GE+A++ FR M
Sbjct: 508 MYVQAGCFTNARLVFDRLKERD--------VFSWTVVMSTYAKTDEGEKAIECFRSMLRE 559
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
N T++ LSVC++ A L G ++H + ++ N ++ V + L++MY+KCG L +
Sbjct: 560 NKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSV-VSSALVDMYVKCGNLADA 618
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
++F++ + DL+ WN++I GY +G G AL F+EMI+ G PD + FV VLSACSHA
Sbjct: 619 EMLFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHA 678
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GL++EGRR F ++ + I P +EHYACMVD+L +AG L EA ++ MP+ P+A +W T
Sbjct: 679 GLLDEGRRYFKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKT 738
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
+L +CRMH N ++AE A ++F + S +LLSNIYA RW D AK+R +G+
Sbjct: 739 ILGACRMHGNIEIAERAAEKLFESQPDDISSCILLSNIYADLKRWNDVAKLRSMLVDRGV 798
Query: 647 KKVAGQSWIEVKRKIHMFSSGN 668
KK G SWIE+ K+H+F S +
Sbjct: 799 KKEPGCSWIEINGKLHVFLSQD 820
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/601 (21%), Positives = 244/601 (40%), Gaps = 115/601 (19%)
Query: 10 HQFSPSNPSRPFSIITYNNSLLDCFDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLA 66
H +PS R + L + LQ C + + + K +H +L+ +G AFL
Sbjct: 39 HPSAPSPSPRDDERLRLRAEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLH 98
Query: 67 ARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL 126
+L++Y + GRL DAR+VF+ P + W +++ + G AL+L+ +M +
Sbjct: 99 DSLLNMYCKCGRLADARSVFDGMP---HRDVVAWTAMVSAITAAGDAGAALRLFAEMSEE 155
Query: 127 GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ 186
GV+ +GF ++AC +GS F VH +++ + ++ + L+ Y G+
Sbjct: 156 GVVPNGFALAAALKACT-VGS---DLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGE 211
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
+ + + V++ +SWN +LL+
Sbjct: 212 VDVAERALLDSPVRSDVSWN-----------------------------------ALLNE 236
Query: 247 HARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY 306
+AR G + M +FD + + G E+ + VL C +L G+ +HG VIK G E
Sbjct: 237 YARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETD 296
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
+ N LI +Y K + A +F+ I+E ++V + +I+ + + EA ++F Q+
Sbjct: 297 RVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSD 356
Query: 367 LDGGSMERPNVISW-----------------------------------SAVIGAFASNG 391
+ +PN ++ A++G + G
Sbjct: 357 MG----VKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTG 412
Query: 392 RGEEALDLFRKMQ-------------------------------LAKVVANSVTISGLLS 420
++A+ F MQ V+AN T G+L
Sbjct: 413 AVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILR 472
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
C L G ++H V++ + V LL+MY++ GC LVF++++++D+ +
Sbjct: 473 CCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFS 532
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
W ++S Y GE A+ F M+ +P+ LS CS + G ++ +
Sbjct: 533 WTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTI 592
Query: 541 R 541
+
Sbjct: 593 K 593
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 170/389 (43%), Gaps = 66/389 (16%)
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
+R R E+ + A L CA A GK +H +++ G F+ ++L+ +Y K G
Sbjct: 53 LRLRAEEL--RSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGR 110
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAG-----------LCDEAV------------- 358
+ A+++F + +++V+W A++++ AG + +E V
Sbjct: 111 LADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKA 170
Query: 359 -----------EVFSQLEKLDG-------------------------GSMERP--NVISW 380
+V +Q KL+G ++ P + +SW
Sbjct: 171 CTVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSW 230
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+A++ +A +G + + +F K+ + + T+ +L C E G+ +HG V++
Sbjct: 231 NALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIK 290
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
+ + ++ N L+ MY KC E+ + VF +I++ D++ + MIS + + + A
Sbjct: 291 RGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDI 350
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F +M + G KP+ FV + S G VN R I +V+ + A +V +
Sbjct: 351 FMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDA-IVGMYV 409
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ G +Q+A + ++ P+ W TLL+
Sbjct: 410 KTGAVQDAI-LAFDLMQGPDIASWNTLLS 437
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 321 bits (823), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 163/461 (35%), Positives = 251/461 (54%), Gaps = 39/461 (8%)
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
PN TW +++ +A ++L+ M IE +L A L G+ +
Sbjct: 103 PNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKV 162
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
H I+ GFE VFV+N L+ +Y G + A LF + E+
Sbjct: 163 HSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAER------------------ 204
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
N+++W++VI +A NGR EAL LFR+M L V + T
Sbjct: 205 ---------------------NLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFT 243
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
+ LLS CAE AL +GR H ++V+V ++ N+ N LL++Y KCG + + H VF+++E
Sbjct: 244 MVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEME 303
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
+K +++W S+I G +NG G+ AL F+E+ G P + FV VL ACSH G+V+EG
Sbjct: 304 EKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFD 363
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F M E+ I P++EHY CMVDLLGRAGL+++A + ++NMPM+PNA VW TLL +C +H
Sbjct: 364 YFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIH 423
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
+ + E +Q+ L + +G Y+LLSN+YA+ RW D KVR + +G+KK G S
Sbjct: 424 GHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKKTPGHSL 483
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
+E++ ++H F G+ + + L E+ ++ +G VP
Sbjct: 484 VELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVP 524
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 214/489 (43%), Gaps = 66/489 (13%)
Query: 7 HQPHQ---FSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVH-----NQLIVTG 58
H P + F+ S + P S +Y L C LL + + +Q+H + + +T
Sbjct: 15 HSPRKHFSFTISTSTCPESPKSY--ILKKCIALLLSCASSKFKFRQIHAFSIRHGVPLTN 72
Query: 59 ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
+ +L +LS + A +F + WN+++R + AL+
Sbjct: 73 PDMGKYLIFTLLSFCSPMSY---AHQIFSQIQ---NPNIFTWNTMIRGYAESENPMPALE 126
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
LY +M + D T+P +++A + R G+ VH+ ++ GF+ V + N L+
Sbjct: 127 LYRQMHVSCIEPDTHTYPFLLKAIAKLMDVRE----GEKVHSIAIRNGFESLVFVQNTLV 182
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFV 238
MYA G + KLF+ + E N V
Sbjct: 183 HMYAACGHAESAHKLFELM-----------------------------------AERNLV 207
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
TW S+++ +A GR E + LF M RG+E + +LS CA+L A +G+ H ++
Sbjct: 208 TWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYM 267
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
+K G + + NAL+ +Y K G ++ A +F E+EEK++VSW +LI A G EA+
Sbjct: 268 VKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEAL 327
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
E+F +LE+ G M P+ I++ V+ A + G +E D F++M+ + + G
Sbjct: 328 ELFKELER--KGLM--PSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGC 383
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
+ A L ++ H + + M N +V LL C GHL ++ + L
Sbjct: 384 MVDLLGRAGLV--KQAHEFIQNMPMQPNAVVWRTLLG-----ACTIHGHLALGEVARAQL 436
Query: 479 ITWNSMISG 487
+ SG
Sbjct: 437 LQLEPKHSG 445
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 125/232 (53%), Gaps = 10/232 (4%)
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
A ++FSQ++ PN+ +W+ +I +A + AL+L+R+M ++ + ++ T
Sbjct: 93 AHQIFSQIQN--------PNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYP 144
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
LL A+ + G ++H +R + VQN L++MY CG E H +FE + ++
Sbjct: 145 FLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAER 204
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
+L+TWNS+I+GY +NG AL F EM G +PDG V++LSAC+ G + GRR
Sbjct: 205 NLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAH 264
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
MV+ ++ + ++DL + G +++A + M E + W +L+
Sbjct: 265 VYMVK-VGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEME-EKSVVSWTSLI 314
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 151/306 (49%), Gaps = 14/306 (4%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
++VH+ I G + F+ ++ +YA G A +FE + + + WNS++
Sbjct: 160 EKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELM---AERNLVTWNSVINGY 216
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
NG AL L+ +M GV DGFT ++ AC +G+ + G+ H +++++G
Sbjct: 217 ALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGAL----ALGRRAHVYMVKVGL 272
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
GN+H N L+ +YAK G + + K+FD++ K+ +SW + G A+N ALELFK
Sbjct: 273 DGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKE 332
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCADLA 286
+E +GL P+ +T+ +L + + CG ++E D F M++ GI E ++ + L
Sbjct: 333 LERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDL---LG 389
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV---KVAQNLFSEIEEKNIVSWNA 343
+ K H F+ + V L+ HG + +VA+ ++E K+ +
Sbjct: 390 RAGLVKQAHEFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVL 449
Query: 344 LITSYA 349
L YA
Sbjct: 450 LSNLYA 455
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 4/160 (2%)
Query: 432 REIHGHVVR--VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYG 489
R+IH +R V + + + + + C + H +F QI+ ++ TWN+MI GY
Sbjct: 57 RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116
Query: 490 MNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQM 549
+ AL + +M + +PD + +L A + V EG ++ + +R E +
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRN-GFESLV 175
Query: 550 EHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+V + G + A + + M E N W +++N
Sbjct: 176 FVQNTLVHMYAACGHAESAHKLFELM-AERNLVTWNSVIN 214
>gi|356518777|ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 737
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/553 (32%), Positives = 291/553 (52%), Gaps = 57/553 (10%)
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
R VH H+++ + + N LI Y+K G + K F + K SWN
Sbjct: 25 RVKLANAVHGHLIKTALFFDAFLANGLIDAYSKCGCEESAHKTFGDLPNKTTRSWN---- 80
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
+L+S +++ G +E +LFD M +R +
Sbjct: 81 -------------------------------TLISFYSKTGFFDEAHNLFDKMPQRNVVS 109
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
I+ L + +HG + G E V + NALI YGK G+ ++ ++F
Sbjct: 110 YNSLISGNLQWL---------RQVHGVAVIVGMEWNVILNNALIDAYGKCGEPNLSFSVF 160
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+ E+N+VSW +++ +Y A DEA VF M N +SW+A++ F N
Sbjct: 161 CYMPERNVVSWTSMVVAYTRACRLDEACRVFK--------DMPVKNTVSWTALLTGFVRN 212
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN---I 447
G +EA D+F++M V ++ T ++ CA+ A + G+++HG ++R + N +
Sbjct: 213 GGCDEAFDVFKQMLEEGVRPSAPTFVSVIDACAQEALIGRGKQVHGQIIRGDKSGNLFNV 272
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
V N L++MY KCG ++ +FE +D++TWN++I+G+ NG GE +LA F MIEA
Sbjct: 273 YVCNALIDMYAKCGDMKSAENLFEMAPMRDVVTWNTLITGFAQNGHGEESLAVFRRMIEA 332
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
+P+ V F+ VLS C+HAGL NEG ++ D+M R++ ++P+ EHYA ++DLLGR L E
Sbjct: 333 KVEPNHVTFLGVLSGCNHAGLDNEGLQLVDLMERQYGVKPKAEHYALLIDLLGRRNRLME 392
Query: 568 ASDIVKNMP--MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
A +++ +P ++ + VWG +L +CR+H N D+A A ++F L E TG Y++L+NIY
Sbjct: 393 AMSLIEKVPDGIKNHIAVWGAVLGACRVHGNLDLARKAAEKLFELEPENTGRYVMLANIY 452
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
AASG+W A ++R K + L+K S IE++ H F + + ++ +CEV +L
Sbjct: 453 AASGKWGGAKRIRNVMKERCLEKEPACSRIELRNARHEFVAKDKFHPQVEEICEVNSKLV 512
Query: 686 LQMENKGCVPDND 698
L ++ G P D
Sbjct: 513 LHSKDAGYQPYTD 525
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 183/382 (47%), Gaps = 30/382 (7%)
Query: 29 SLLDCFDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNV 85
S ++ + L+ +C T ++K VH LI T AFLA ++ Y++ G A
Sbjct: 8 SSVEKYSFLISKCITARRVKLANAVHGHLIKTALFFDAFLANGLIDAYSKCGCEESAHKT 67
Query: 86 FETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
F P ++ WN+++ G ++ A L+ KM + V+ ++ +I
Sbjct: 68 FGDLP---NKTTRSWNTLISFYSKTGFFDEAHNLFDKMPQRNVV----SYNSLISG---- 116
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
+ + VH + +G + NV + N LI Y K G+ + SF +F + +N +SW
Sbjct: 117 -----NLQWLRQVHGVAVIVGMEWNVILNNALIDAYGKCGEPNLSFSVFCYMPERNVVSW 171
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
M + D A +FK M ++ N V+WT+LL+ R G +E D+F M +
Sbjct: 172 TSMVVAYTRACRLDEACRVFKDMPVK----NTVSWTALLTGFVRNGGCDEAFDVFKQMLE 227
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG---GFEDYVFVKNALICVYGKHGD 322
G+ A V+ CA A GK +HG +I+G G V+V NALI +Y K GD
Sbjct: 228 EGVRPSAPTFVSVIDACAQEALIGRGKQVHGQIIRGDKSGNLFNVYVCNALIDMYAKCGD 287
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
+K A+NLF +++V+WN LIT +A+ G +E++ VF ++ + + PN +++
Sbjct: 288 MKSAENLFEMAPMRDVVTWNTLITGFAQNGHGEESLAVFRRMIE----AKVEPNHVTFLG 343
Query: 383 VIGAFASNGRGEEALDLFRKMQ 404
V+ G E L L M+
Sbjct: 344 VLSGCNHAGLDNEGLQLVDLME 365
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 144/292 (49%), Gaps = 25/292 (8%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y R RL +A VF+ P +++ W ++L V NG + A ++ +M + GV
Sbjct: 178 YTRACRLDEACRVFKDMPV---KNTVSWTALLTGFVRNGGCDEAFDVFKQMLEEGVRPSA 234
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN---VHIVNELIGMYAKMGQMSD 189
TF VI AC + G+ VH +++ GN V++ N LI MYAK G M
Sbjct: 235 PTFVSVIDAC----AQEALIGRGKQVHGQIIRGDKSGNLFNVYVCNALIDMYAKCGDMKS 290
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
+ LF+ +++ ++WN + +GFA N + +L +F+RM +EPN VT+ +LS
Sbjct: 291 AENLFEMAPMRDVVTWNTLITGFAQNGHGEESLAVFRRMIEAKVEPNHVTFLGVLSGCNH 350
Query: 250 CGRLEETMDLFDMM-RKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV----IKGGFE 304
G E + L D+M R+ G++ AE A+++ + +++ + G +
Sbjct: 351 AGLDNEGLQLVDLMERQYGVKPKAEHYALLIDLLG-----RRNRLMEAMSLIEKVPDGIK 405
Query: 305 DYVFVKNALICVYGKHGDV----KVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+++ V A++ HG++ K A+ LF E+E +N + L YA +G
Sbjct: 406 NHIAVWGAVLGACRVHGNLDLARKAAEKLF-ELEPENTGRYVMLANIYAASG 456
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 106/229 (46%), Gaps = 15/229 (6%)
Query: 48 KQVHNQLI---VTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSIL 104
KQVH Q+I +G + ++ ++ +YA+ G + A N+FE AP + WN+++
Sbjct: 254 KQVHGQIIRGDKSGNLFNVYVCNALIDMYAKCGDMKSAENLFEMAPM---RDVVTWNTLI 310
Query: 105 RVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
NG E +L ++ +M + V + TF V+ C G Q+V Q
Sbjct: 311 TGFAQNGHGEESLAVFRRMIEAKVEPNHVTFLGVLSGCNHAG---LDNEGLQLVDLMERQ 367
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR--VKNYIS-WNMMFSGFALNFDCDGA 221
G + LI + + ++ ++ L +KV +KN+I+ W + ++ + D A
Sbjct: 368 YGVKPKAEHYALLIDLLGRRNRLMEAMSLIEKVPDGIKNHIAVWGAVLGACRVHGNLDLA 427
Query: 222 LELFKRMELEGLEP-NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
+ ++ L LEP N + L + +A G+ + ++M++R +E
Sbjct: 428 RKAAEK--LFELEPENTGRYVMLANIYAASGKWGGAKRIRNVMKERCLE 474
>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 195/667 (29%), Positives = 340/667 (50%), Gaps = 58/667 (8%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L+Q C + + Q KQ+H +++++ FLA+++++ Y++ L++A VF+
Sbjct: 37 FGRLIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVFDKI- 95
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL---GDGFTFPLVIRACKFMGS 147
+ WN++L + ++ + L L + L D FT V++A +
Sbjct: 96 --LDKNIFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVL-- 151
Query: 148 FRFRFS-FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
F S + V VL+ GF ++ +VN LI Y++ + + LFD++
Sbjct: 152 --FPDSILAKEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIARILFDRMH-------- 201
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRK 265
+ + V+W S+++ +++ G E+ +L+ M+
Sbjct: 202 ---------------------------DRDIVSWNSMIAGYSQGGFYEDCKELYRKMLDS 234
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
G+ + VL CA G +H F+I+ E V N+LI +Y K G +
Sbjct: 235 TGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDY 294
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A+ LF+E+ K+ V++ ++++ Y G D+A+++F + M+ P + +W+AVI
Sbjct: 295 ARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFRE--------MKNPRLSTWNAVIS 346
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
N E L+L ++MQ N+VT+S +L + + L G+ IH + +R
Sbjct: 347 GLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSNLKGGKAIHAYAIRNGYAH 406
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
NI V +++ Y K G L VF+Q + + LI W ++IS Y +G AL F +M+
Sbjct: 407 NIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISAYSAHGDANAALRLFGDML 466
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
G +PD V F AVL+AC+H+G+VNE +IFD M ++ +P +EHYACMV +L RAG+L
Sbjct: 467 SNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGFQPCVEHYACMVGVLSRAGML 526
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
EA++ + MP+EPNA VWG LLN + + ++ + + +F + E TG+Y++++N+Y
Sbjct: 527 SEAAEFICKMPIEPNAKVWGALLNGVSVSGDVELGKFVCDHLFNMEPENTGNYVIMANLY 586
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
+ +GRWE+A +R K GLKK+ G SWIE + F + + + + +LE L
Sbjct: 587 SQAGRWEEAENIREKMKKIGLKKIPGTSWIETSGGLRSFIARDVSSERSEEIYGMLEGLL 646
Query: 686 LQMENKG 692
M +G
Sbjct: 647 GLMREEG 653
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 131/542 (24%), Positives = 256/542 (47%), Gaps = 39/542 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K+V ++ G ++ F+ +++ Y+R AR +F+ + WNS++
Sbjct: 159 KEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIARILFDRMH---DRDIVSWNSMIAGY 215
Query: 108 VSNGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
G YE+ +LY KM G+ +G T V++AC FG VH +++
Sbjct: 216 SQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDL----VFGMKVHQFIIERK 271
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+ +V N LIG+YAK G + + +LF+++ K+ +++ + SG+ + D A++LF+
Sbjct: 272 VEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFR 331
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
M+ P TW +++S + E ++L M++ G A ++ +L + +
Sbjct: 332 EMK----NPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFS 387
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
GK IH + I+ G+ ++V ++I Y K G ++ AQ +F + ++++++ W A+I+
Sbjct: 388 NLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIIS 447
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
+Y+ G + A+ +F + L G+ +P+ ++++AV+ A A +G EA +F +M L
Sbjct: 448 AYSAHGDANAALRLFGDM--LSNGT--QPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLK 503
Query: 407 KVVANSVT-ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
V + ++ V + + L+ E + ++ + N V LLN G +E
Sbjct: 504 YGFQPCVEHYACMVGVLSRAGMLSEAAEF---ICKMPIEPNAKVWGALLNGVSVSGDVEL 560
Query: 466 GHLVFEQI---EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP-DGVAFVAVLS 521
G V + + E ++ + M + Y G E A E+M + G K G +++
Sbjct: 561 GKFVCDHLFNMEPENTGNYVIMANLYSQAGRWEEAENIREKMKKIGLKKIPGTSWIE--- 617
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
+ G R F + R+ E E Y + LL GL++E +++ E A
Sbjct: 618 -------TSGGLRSF--IARDVSSERSEEIYGMLEGLL---GLMREEGYTLQDELDEECA 665
Query: 582 YV 583
Y+
Sbjct: 666 YI 667
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 176/372 (47%), Gaps = 29/372 (7%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
++ +NSL+ L +C ++ +++ N++ +N ++S Y G + A
Sbjct: 276 VSAHNSLIG----LYAKCGSLDYARELFNEM----SNKDEVTYGSIVSGYMTHGFVDKAM 327
Query: 84 NVFETAPFDCKSSSL-LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
++F + K+ L WN+++ V N E L+L +M++ G + T ++
Sbjct: 328 DLFR----EMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTF 383
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ + G+ +H + ++ G+ N+++ +I YAK+G + + +FD+ + ++
Sbjct: 384 SCFSNLKG----GKAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSL 439
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD- 261
I W + S ++ + D + AL LF M G +P+ VT+T++L++ A G + E +FD
Sbjct: 440 IVWTAIISAYSAHGDANAALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDE 499
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
M K G + E A ++ V L+ M F+ K E V AL+ G
Sbjct: 500 MFLKYGFQPCVEHYACMVGV---LSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSVSG 556
Query: 322 DVK----VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
DV+ V +LF+ +E +N ++ + Y++AG +EA + +++K+ G + P
Sbjct: 557 DVELGKFVCDHLFN-MEPENTGNYVIMANLYSQAGRWEEAENIREKMKKI--GLKKIPGT 613
Query: 378 ISWSAVIGAFAS 389
SW G S
Sbjct: 614 -SWIETSGGLRS 624
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 144/339 (42%), Gaps = 48/339 (14%)
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
G++ GA ++ C+D K +H ++ F+ + LI Y K + A
Sbjct: 31 GLDYGA--FGRLIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEA 88
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+F +I +KNI SWNA++ Y+ + +P+ + + V+ A
Sbjct: 89 HKVFDKILDKNIFSWNAMLIGYSIHNM-HVHTLNLLSSLLPSYSLTLKPDNFTITCVLKA 147
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
+ LF LAK E+ V+R + +
Sbjct: 148 LSV---------LFPDSILAK-------------------------EVQCFVLRHGFDSD 173
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
I V N L+ Y +C ++F+++ +D+++WNSMI+GY G E+ + +M++
Sbjct: 174 IFVVNALITYYSRCDEYGIARILFDRMHDRDIVSWNSMIAGYSQGGFYEDCKELYRKMLD 233
Query: 507 A-GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME----HYACMVDLLGR 561
+ G +P+GV V+VL AC+ + +F M V +F IE ++E + ++ L +
Sbjct: 234 STGLRPNGVTVVSVLQACAQTNDL-----VFGMKVHQFIIERKVEMDVSAHNSLIGLYAK 288
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
G L A ++ M + +G++++ H D A
Sbjct: 289 CGSLDYARELFNEMS-NKDEVTYGSIVSGYMTHGFVDKA 326
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 203/687 (29%), Positives = 350/687 (50%), Gaps = 60/687 (8%)
Query: 2 RHSLLHQPHQFSPSNPSRPFSI-ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGAN 60
+ LH +P R F+ + ++L C DHL + Q KQ+H + +G
Sbjct: 44 ENPFLHLNSLLNPKTGQRHFNYELVLVSALKFCSDHLF-----LSQGKQIHCLVSKSGLG 98
Query: 61 ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNG--------- 111
++ F+ ++++Y + G L DA+++F+ P +S + +N ++ V +G
Sbjct: 99 SNNFIQNSLINMYGKCGLLVDAKSIFDVCP---RSDPVSYNVMISGYVKSGQLDYACELF 155
Query: 112 ----------------------LYENALKLYVKMRKLGVLGDGFTFPLVIRA-CKFMGSF 148
+ A++L+ +MR +GV+ + T ++ A F G +
Sbjct: 156 DEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIW 215
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
R ++H V++M F+ V + L+ MY + ++ LFD++ KN +SWN+M
Sbjct: 216 ACR-----MLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVM 270
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+G++ D A +F+R+ + VTW +++ + R R+ E + ++ M G
Sbjct: 271 LNGYSKAGFVDSARVVFERIP----NKDLVTWGTIIDGYVRVERINEALMMYRSMISAGW 326
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
E + ++S C A G+ + V+K GF+ Y F+++ +I +Y G + A
Sbjct: 327 EPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACL 386
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
F ++N+ SWNALI Y + D A+E+F+++ + D V SWS +I +
Sbjct: 387 QFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERD--------VFSWSTMISGYT 438
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
N + AL+LF KM + + N VT+ +LS A S L GR H +V S+ +
Sbjct: 439 QNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDN 498
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKK--DLITWNSMISGYGMNGLGENALATFEEMIE 506
+ +++MY KCG + VF +I +K + WN++I G ++G +L F ++
Sbjct: 499 LSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLER 558
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
K + + F+ VL+AC H GLV G+R F M E I+P ++HY CMVDLLGRAG L+
Sbjct: 559 RHIKLNAITFIGVLTACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLE 618
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
EA +++++MPM+ + +WGTLL +CR H N DV E A + L S +LLSN+YA
Sbjct: 619 EAEEMIRSMPMKADVVIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYA 678
Query: 627 ASGRWEDAAKVRISAKTKGLKKVAGQS 653
+G+WEDA VR + ++ ++++ G S
Sbjct: 679 DAGKWEDAFLVRRAMQSHRMQRLPGYS 705
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 205/744 (27%), Positives = 351/744 (47%), Gaps = 115/744 (15%)
Query: 18 SRPFSIITYNNSLLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYA 74
S P +TY HL+ C ++ L +++H ++ L +LS+Y
Sbjct: 93 SSPLKSVTYT--------HLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYG 144
Query: 75 RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFT 134
+ G L +ARN+F++ P + + W S++ G +NA+ LYV+M + G + D FT
Sbjct: 145 KCGSLKEARNMFDSMPL---KNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFT 201
Query: 135 FPLVIRACKFMGSFRF---------RFSFGQ--IVHNHVL-------QMGFQGNVH---I 173
F ++++C + F+ + FG I N ++ QM NV I
Sbjct: 202 FGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRII 261
Query: 174 VNELIG---MYAKMGQMSDSFK--------LFDKVRVKNYISWNMMFSG----------- 211
+ +LI M A Q+ + L V N + FS
Sbjct: 262 IKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGR 321
Query: 212 --------FALNFD-------CD-----GALELFKRMELEGLEPNFVTWTSLLSSHARCG 251
F L D CD G LE + + +P+ V W ++++ A
Sbjct: 322 QIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVS 381
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
+E+ F MR G+ + +L C++ + G +H +++K GF + V N
Sbjct: 382 NAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCN 441
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
+L+ +Y K ++ ++A++VF +
Sbjct: 442 SLLSMYSKCSNL-------------------------------NDALQVFEDIGN----- 465
Query: 372 MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIG 431
+ +++SW+ ++ A + E L L + M +++ + VT++ +L + A+ +G
Sbjct: 466 --KADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVG 523
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
+IH +++ +N +I V N L+NMY KCG LE +F+ I D+I+W+S+I GY
Sbjct: 524 SQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQA 583
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G G+ A F M G KP+ + FV +L+ACSH G+V EG +++ M ++RI P EH
Sbjct: 584 GCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEH 643
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
+CMVDLL RAG L A D ++ MP P+ VW TLL +C++H N +V + A + +
Sbjct: 644 CSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKID 703
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
+ + ++L NI+A+SG W+D A++R S + + KV GQSWIE+K K+H+F + ++L
Sbjct: 704 PSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFLAEDNLH 763
Query: 672 SDLKNVCEVLEELALQMENKGCVP 695
+ + +LEEL LQ+ + C P
Sbjct: 764 PERGKIYTMLEELMLQILDDSCDP 787
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 82/130 (63%), Gaps = 2/130 (1%)
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
+A D+F+K + + SVT + L++ C+ +L GR+IH H++ + ++++QN +L
Sbjct: 83 KAFDIFQKCSSSPL--KSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHIL 140
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCG L+E +F+ + K++++W SMISGY G +NA+ + +M+ +G PD
Sbjct: 141 SMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHF 200
Query: 515 AFVAVLSACS 524
F +++ +CS
Sbjct: 201 TFGSIVKSCS 210
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/593 (31%), Positives = 303/593 (51%), Gaps = 87/593 (14%)
Query: 111 GLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN 170
GLY AL L +++ ++ D + +++ C +G + G+IVH H++ F N
Sbjct: 71 GLY--ALDL---IQRGSLVPDYNLYSKLLKECTRLG----KVEQGRIVHAHLVDSHFLDN 121
Query: 171 VHIV--NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
H+V N ++ MYAK G + D+ ++FD++ K+
Sbjct: 122 -HLVLQNIIVNMYAKCGCLDDARRMFDEMPTKD--------------------------- 153
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
VTWT+L++ ++ R + + LF M + G + ++ +L
Sbjct: 154 --------MVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGL 205
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
G +H F +K G++ V+V +AL+ +Y + G + AQ F
Sbjct: 206 DPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAF------------------ 247
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
DG M + +SW+A+I A G GE AL L KMQ
Sbjct: 248 -------------------DG--MPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNF 286
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
T S +LS CA AL G+ +H H+++ + + N LL+MY K G +++
Sbjct: 287 QPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKR 346
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
VF+++ K D+++WN+M++G +GLG+ L FE+M+ G +P+ ++F+ VL+ACSH+GL
Sbjct: 347 VFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGL 406
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
++EG F++M +++++EP + HY VDLLGR GLL A ++ MP+EP A VWG LL
Sbjct: 407 LDEGLYYFELM-KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
+CRMHKN ++ A + F L +G MLLSNIYA++GRW D AKVR K G+KK
Sbjct: 466 GACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKK 525
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
SW+E++ +H+F + + +K + EE++ +++ G VPD +L
Sbjct: 526 QPACSWVEIENAVHLFVANDETHPRIKEIRGKWEEISGKIKEIGYVPDTSHVL 578
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 190/393 (48%), Gaps = 53/393 (13%)
Query: 34 FDHLLQQCKTIHQLKQ---VHNQLIVTG-ANASAFLAARVLSIYARFGRLFDARNVFETA 89
+ LL++C + +++Q VH L+ + + L ++++YA+ G L DAR +F+
Sbjct: 90 YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
P + W +++ N +AL L+ +M +LG + FT +++A GS
Sbjct: 150 P---TKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKAS---GS-E 202
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G +H L+ G+Q +V++ + L+ MYA+ G M + FD + K+ +SWN +
Sbjct: 203 HGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALI 262
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
SG A + + AL L +M+ + +P T++S+LS+
Sbjct: 263 SGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSA----------------------- 299
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
CA + A GK +H +IK G + F+ N L+ +Y K G + A+ +
Sbjct: 300 ------------CASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRV 347
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
F + + ++VSWN ++T A+ GL E ++ F Q+ ++ +E PN IS+ V+ A +
Sbjct: 348 FDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRI---GIE-PNEISFLCVLTACSH 403
Query: 390 NGRGEEALDLFRKMQLAKV---VANSVTISGLL 419
+G +E L F M+ KV V + VT LL
Sbjct: 404 SGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLL 436
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 105/203 (51%), Gaps = 6/203 (2%)
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS-MNKN 446
+ G G ALDL +Q +V + S LL C + GR +H H+V ++ +
Sbjct: 66 SDGGTGLYALDL---IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNH 122
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+++QN ++NMY KCGCL++ +F+++ KD++TW ++I+G+ N +AL F +M+
Sbjct: 123 LVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
GF+P+ ++L A ++ G ++ ++ + + + + +VD+ R G +
Sbjct: 183 LGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLK-YGYQSSVYVGSALVDMYARCGHMD 241
Query: 567 EASDIVKNMPMEPNAYVWGTLLN 589
A MP + + W L++
Sbjct: 242 AAQLAFDGMPTK-SEVSWNALIS 263
>gi|242066664|ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/464 (38%), Positives = 255/464 (54%), Gaps = 15/464 (3%)
Query: 236 NFVTWTSLLSSHARCGRLEETM-DLFDMMRKRGIEVGAE-AIAVVLSVCADLAADHMGK- 292
+ V+WTS ++ AR G L L M+ + + VLS CAD + + +
Sbjct: 31 DVVSWTSTIARAARQGDLHAAAASLCAMLSSPAAPAPNDVTLLTVLSACADSPSSPLARP 90
Query: 293 ---VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+H +K F ++ + L Y +A LF + +++V++N +++
Sbjct: 91 LALTLHARALKL-FPSHLLLSTCLARFYLASRLPHLALQLFDTMPVRSVVTYNTMVSGLM 149
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
GL D A EVF DG M P+ +SW+A+I F NGR +EA+D FR M L V
Sbjct: 150 RNGLVDAAFEVF------DG--MPGPDKVSWTALIDGFVKNGRHDEAIDCFRAMLLDSVE 201
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
+ VT+ ++S CAE AL +G +H V+R + +N+ V N L++MY +CG ++ V
Sbjct: 202 PDYVTLIAVVSACAEVGALGLGMWVHRLVLRQGLERNVRVANSLIDMYARCGQVKLAAQV 261
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F I K+ +++WNSMI G NGL A+ FEEM GFKPD V VL+ACSHAGL
Sbjct: 262 FHSIRKRTVVSWNSMIVGLAANGLCTEAIELFEEMRRQGFKPDAVTLTGVLTACSHAGLT 321
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
G R +D+M E+ I +MEHY C+VDLLGRAG L EA +V+ MPM PN V G LL
Sbjct: 322 EHGLRYYDLMTTEYGIAARMEHYGCVVDLLGRAGRLDEAMHVVETMPMRPNEVVLGALLA 381
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
CRMH + D+AE + +F L +Y+LLSNIYAA G+W+ A KVR K +G+KK
Sbjct: 382 GCRMHGDLDMAEQLMQHLFELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLMKARGVKKR 441
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
G S +E+ +H F S + + + ++L L +M GC
Sbjct: 442 PGHSIVEIDGDVHEFVSSDRSHPQAEEIGQMLGLLRHEMAMYGC 485
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 147/319 (46%), Gaps = 11/319 (3%)
Query: 87 ETAPFDCKSSSLLWNS-ILRVNVSNGLYENALKLYVKMRKLGVLG-DGFTFPLVIRACKF 144
+ AP + W S I R L+ A L + + T V+ AC
Sbjct: 22 QRAPRHAPRDVVSWTSTIARAARQGDLHAAAASLCAMLSSPAAPAPNDVTLLTVLSACAD 81
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
S +H L++ F ++ + L Y + +LFD + V++ ++
Sbjct: 82 SPSSPLARPLALTLHARALKL-FPSHLLLSTCLARFYLASRLPHLALQLFDTMPVRSVVT 140
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
+N M SG N D A E+F M P+ V+WT+L+ + GR +E +D F M
Sbjct: 141 YNTMVSGLMRNGLVDAAFEVFDGMP----GPDKVSWTALIDGFVKNGRHDEAIDCFRAML 196
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
+E + V+S CA++ A +G +H V++ G E V V N+LI +Y + G VK
Sbjct: 197 LDSVEPDYVTLIAVVSACAEVGALGLGMWVHRLVLRQGLERNVRVANSLIDMYARCGQVK 256
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
+A +F I ++ +VSWN++I A GLC EA+E+F ++ + +P+ ++ + V+
Sbjct: 257 LAAQVFHSIRKRTVVSWNSMIVGLAANGLCTEAIELFEEMRR----QGFKPDAVTLTGVL 312
Query: 385 GAFASNGRGEEALDLFRKM 403
A + G E L + M
Sbjct: 313 TACSHAGLTEHGLRYYDLM 331
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 176/392 (44%), Gaps = 24/392 (6%)
Query: 13 SPSNP-SRPFSIITYNNSLLDCFDHLL-QQCKT----IHQLKQVHNQLIVTGANASAFLA 66
SPS+P +RP ++ + +L HLL C +L + QL T S
Sbjct: 82 SPSSPLARPLALTLHARALKLFPSHLLLSTCLARFYLASRLPHLALQLFDTMPVRSVVTY 141
Query: 67 ARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL 126
++S R G + A VF+ P K S W +++ V NG ++ A+ + M
Sbjct: 142 NTMVSGLMRNGLVDAAFEVFDGMPGPDKVS---WTALIDGFVKNGRHDEAIDCFRAMLLD 198
Query: 127 GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ 186
V D T V+ AC +G+ G VH VL+ G + NV + N LI MYA+ GQ
Sbjct: 199 SVEPDYVTLIAVVSACAEVGAL----GLGMWVHRLVLRQGLERNVRVANSLIDMYARCGQ 254
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
+ + ++F +R + +SWN M G A N C A+ELF+ M +G +P+ VT T +L++
Sbjct: 255 VKLAAQVFHSIRKRTVVSWNSMIVGLAANGLCTEAIELFEEMRRQGFKPDAVTLTGVLTA 314
Query: 247 HARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
+ G E + +D+M GI E V+ + A + + +H V
Sbjct: 315 CSHAGLTEHGLRYYDLMTTEYGIAARMEHYGCVVDLLGR--AGRLDEAMH-VVETMPMRP 371
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFS---EIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
V AL+ HGD+ +A+ L E++ ++ L YA G D A +V S
Sbjct: 372 NEVVLGALLAGCRMHGDLDMAEQLMQHLFELDPGGDANYVLLSNIYAAVGKWDGAGKVRS 431
Query: 363 QLEKLDGGSMERP--NVISWSAVIGAFASNGR 392
++ G +RP +++ + F S+ R
Sbjct: 432 LMKAR--GVKKRPGHSIVEIDGDVHEFVSSDR 461
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 202/665 (30%), Positives = 345/665 (51%), Gaps = 51/665 (7%)
Query: 57 TGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENA 116
TG N S F +R+ +R G++ +AR F++ + S WNSI+ +NGL A
Sbjct: 16 TGVNNS-FEISRL----SRIGQINEARKFFDSLRYKAIGS---WNSIVSGYFANGLPREA 67
Query: 117 LKLYVKMRKLGVLG-----DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNV 171
+++ +M + ++ G+ +I + +V ++ + NV
Sbjct: 68 RQMFDEMPERNIVSWNGLVSGYIKNRMIEEAR-----------------NVFEIMPERNV 110
Query: 172 HIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELE 231
++ Y + G + ++ LF ++ +N +SW +MF G D A +L+ M +
Sbjct: 111 VSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGK 170
Query: 232 GLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMG 291
+ V T+++ R GR++E ++FD MR+R + ++ + D
Sbjct: 171 ----DVVASTNMIGGLCREGRVDEAREIFDEMRERNV---ITWTTMITGYGQNKRVDVAR 223
Query: 292 KVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEA 351
K+ E +++ Y G ++ A+ F + K +++ NA+I + E
Sbjct: 224 KLFEVMP-----EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEV 278
Query: 352 GLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVAN 411
G +A VF Q+E D + W +I A+ G EAL+LF +MQ V +
Sbjct: 279 GEIVKARRVFDQMEDRDNAT--------WRGMIKAYERKGFELEALELFAQMQRQGVRPS 330
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
++ +LSVCA A+L GR++H H+VR + ++ V + L+ MY+KCG L + LVF+
Sbjct: 331 FPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFD 390
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
+ KD+I WNS+ISGY +GLGE AL F EM +G P+ V +A+L+ACS+ G + E
Sbjct: 391 RFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEE 450
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
G IF+ M +F + P +EHY+C VD+LGRAG + +A +++ +M ++P+A VWG LL +C
Sbjct: 451 GLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGAC 510
Query: 592 RMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
+ H D+AE A ++F + E G Y+LLS+I A+ +W D A++R + +TK + K G
Sbjct: 511 KTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPG 570
Query: 652 QSWIEVKRKIHMFSSGN-SLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNV 710
SWIEV +K+HMF+ G + + +LE+ + G PD +L ++ ++ V
Sbjct: 571 CSWIEVGKKVHMFTRGGIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKV 630
Query: 711 KRIQR 715
+ R
Sbjct: 631 DSLSR 635
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 105/227 (46%), Gaps = 16/227 (7%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C T+ L +QVH L+ + ++A+ ++++Y + G L A+ VF+ P
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFP--- 393
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
++WNSI+ S+GL E ALK++ +M G + + T ++ AC + G
Sbjct: 394 SKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGL- 452
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGF 212
+I + + V + + M + G++ + +L + + +K + W +
Sbjct: 453 --EIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGAC 510
Query: 213 ALNFDCD----GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
+ D A +LF+ +E E P ++ +S+ +S ++ G + E
Sbjct: 511 KTHSRLDLAEVAAKKLFE-IEPENAGP-YILLSSINASRSKWGDVAE 555
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 302/590 (51%), Gaps = 43/590 (7%)
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
F ++R+CK + Q V ++ GFQ N ++ ++ + + QM+ + LF
Sbjct: 70 FISLLRSCKTVALL-------QKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLF 122
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
D WN + G+ N + LF +M+ + PN T+ +L S A+ G
Sbjct: 123 DHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFV 182
Query: 255 ETMDLFDMMRKRGIE-------------VGAEAIAVVLSVCADLAADHM---GKVIHGFV 298
E ++ + K G+E G AI + + ++ +I G++
Sbjct: 183 EGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYI 242
Query: 299 IKG-----------GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+ E V + N ++ Y + GD+K A+ LF + ++ +SWN ++
Sbjct: 243 LCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNG 302
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL-A 406
YA G + ++F + M NV SW+ +IG +A NG E L F++M +
Sbjct: 303 YANNGDVEACEQLFEE--------MPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDG 354
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
VV N T+ +LS CA AL++G+ +H + + +I V N L++MY KCG +E
Sbjct: 355 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENA 414
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
VFE ++ KDLITWNSMI G +G G +AL F +M G KPDG+ F+ VL +C+H
Sbjct: 415 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 474
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GLV EG F+ MV E+ I PQ+EHY CMVDL GRAGLL A + VK MPME +A +W
Sbjct: 475 GLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 534
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL +CR++KN D+AE ++ L + +Y+LLSNIY GRW+D A+++I + G
Sbjct: 535 LLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGS 594
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
KK+ G S IEV + F S + S K + VL+ L + + G P+
Sbjct: 595 KKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYEPN 644
Score = 156 bits (394), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 219/480 (45%), Gaps = 72/480 (15%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F LL+ CKT+ L++V Q+I G + ++A V++ + ++ AR++F+ P D
Sbjct: 70 FISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP-DP 128
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K LWN+I R N Y + L+ KM+ + V + FTFPLV+++C +G+ F
Sbjct: 129 KVE--LWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGA----FV 182
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK--------------------- 192
G+ +H V++ G +GN + LI +Y+ + ++K
Sbjct: 183 EGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYI 242
Query: 193 ----------LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM-------------- 228
LFD ++ + WN+M SG+ D A +LF M
Sbjct: 243 LCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNG 302
Query: 229 -----ELEGLEP--------NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
++E E N +W L+ +A G E + F M G+ V +A
Sbjct: 303 YANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDAT 362
Query: 276 AV-VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
V VLS CA L A +GK +H + GF+ ++V NALI +Y K G ++ A +F ++
Sbjct: 363 LVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMD 422
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
K++++WN++I A G +A+ +F Q+ K++G E+P+ I++ V+ + G E
Sbjct: 423 LKDLITWNSMICGLATHGCGADALTLFHQM-KING---EKPDGITFIGVLCSCTHLGLVE 478
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
E F M +A + G + A L + R I V R+ M + ++ LL
Sbjct: 479 EGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGL-LDRAIE-FVKRMPMEADAVIWAALL 536
>gi|224115100|ref|XP_002332237.1| predicted protein [Populus trichocarpa]
gi|222831850|gb|EEE70327.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 169/421 (40%), Positives = 253/421 (60%), Gaps = 21/421 (4%)
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ EK++VS A+IT YA+ G+ DEA +F LE+ D I W+ +I +A +G
Sbjct: 1 MPEKSLVSLTAMITCYAKYGMIDEARVLFDGLEERD--------AICWNVMIDGYAQHGL 52
Query: 393 GEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNG 452
E L LFR+M AKV N VT+ +LS C ++ AL GR +H ++ + N+ V
Sbjct: 53 PNEGLLLFRQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIENNGIGINVRVGTS 112
Query: 453 LLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
L++MY KCG LE+ LVFE+I KD++ WNSM+ GY M+G ++AL F+EM G++P
Sbjct: 113 LIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPT 172
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
+ F+ VL+ACSHAGLV+EG + F M E+ IEP++EHY CMV+LLGRAG L+EA ++V
Sbjct: 173 DITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELV 232
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
KNM ++ + +WGTLL +CR+H N + E +A + +G+Y+LLSNIYAA+G WE
Sbjct: 233 KNMEIDQDPVLWGTLLGACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWE 292
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKG 692
A+VR K G +K G S IEV K+H F +G+ + + E+LEE+ ++ G
Sbjct: 293 GVARVRTLMKESGFEKEPGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEINGWLKTHG 352
Query: 693 CVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRSTNGQLMK 752
P DI+L +++ Q+ R+ + S+ L L L+ + T +++K
Sbjct: 353 YTPQTDIVL------HDLEDAQKERSLGVHSE-------KLALAFGLITTKPGTTIKIVK 399
Query: 753 N 753
N
Sbjct: 400 N 400
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+++ YA++G + +AR +F+ + ++ WN ++ +GL L L+ +M V
Sbjct: 12 MITCYAKYGMIDEARVLFDGLE---ERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKV 68
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ T V+ AC G+ G+ VH+++ G NV + LI MY+K G +
Sbjct: 69 RPNEVTVLAVLSACGQTGALET----GRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLE 124
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
D+ +F+++ K+ ++WN M G+A++ AL LFK M + G +P +T+ +L++ +
Sbjct: 125 DARLVFERISNKDVVAWNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACS 184
Query: 249 RCGRLEETMDLFDMMRKR-GIEVGAE 273
G + E F M+ GIE E
Sbjct: 185 HAGLVSEGWKFFYSMKDEYGIEPKVE 210
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/497 (20%), Positives = 199/497 (40%), Gaps = 78/497 (15%)
Query: 177 LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN 236
+I YAK G + ++ LFD + ++ I WN+M G+A + + L LF++M + PN
Sbjct: 12 MITCYAKYGMIDEARVLFDGLEERDAICWNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPN 71
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
VT + VLS C A G+ +H
Sbjct: 72 EVT-----------------------------------VLAVLSACGQTGALETGRWVHS 96
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
++ G V V +LI +Y K G ++ A+ +F I K++V+WN+++ YA G +
Sbjct: 97 YIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERISNKDVVAWNSMVVGYAMHGFSQD 156
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
A+ +F ++ + +P I++ V+ A + G E F M+ + V
Sbjct: 157 ALRLFKEMCMIG----YQPTDITFIGVLNACSHAGLVSEGWKFFYSMKDEYGIEPKVEHY 212
Query: 417 G-LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
G ++++ + L E+ V + ++++ ++ LL G + G + E +
Sbjct: 213 GCMVNLLGRAGYLEEAYEL---VKNMEIDQDPVLWGTLLGACRLHGNIALGEQIAEYLVS 269
Query: 476 KDLI---TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
++L T+ + + Y G E M E+GF+ + CS + N
Sbjct: 270 QNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEKE--------PGCSSIEVNN-- 319
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
++ + + + R E Y +L+E + +K P + L +
Sbjct: 320 -KVHEFLAGDLRHPKSREIYE----------MLEEINGWLKTHGYTPQTDIVLHDLEDAQ 368
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYM-LLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
++ V + FGLIT G+ + ++ N+ + A TK + K+ G
Sbjct: 369 KERSLGVHSEKLALAFGLITTKPGTTIKIVKNLRVCA---------DCHAVTKLISKITG 419
Query: 652 QSWIEVKR-KIHMFSSG 667
+ + R + H F +G
Sbjct: 420 RKVVMRDRNRFHHFVNG 436
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 110/256 (42%), Gaps = 18/256 (7%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
Q + + VH+ + G + + ++ +Y++ G L DAR VFE +
Sbjct: 84 QTGALETGRWVHSYIENNGIGINVRVGTSLIDMYSKCGSLEDARLVFERIS---NKDVVA 140
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG----SFRFRFSFG 155
WNS++ +G ++AL+L+ +M +G TF V+ AC G ++F +S
Sbjct: 141 WNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMK 200
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRV-KNYISWNMMFSGFAL 214
+ G + V ++ + + G + ++++L + + ++ + W + L
Sbjct: 201 D-------EYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGACRL 253
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI--EVGA 272
+ + ++ + + + L N T+ L + +A G E + +M++ G E G
Sbjct: 254 HGNIALGEQIAEYLVSQNL-ANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEKEPGC 312
Query: 273 EAIAVVLSVCADLAAD 288
+I V V LA D
Sbjct: 313 SSIEVNNKVHEFLAGD 328
>gi|218193985|gb|EEC76412.1| hypothetical protein OsI_14066 [Oryza sativa Indica Group]
Length = 628
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/570 (31%), Positives = 297/570 (52%), Gaps = 50/570 (8%)
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
F + RAC+ + R +H G + N L+ YA +G ++ + +LF
Sbjct: 47 FSHLFRACRALRPLR-------QLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELF 99
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
+++ +N +SWN++F G+ N D GA +LF M E N TW ++++ G E
Sbjct: 100 ERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMP----ERNVATWNAMVAGLTNLGFDE 155
Query: 255 ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
E++ LF MR+ G+ + V CA L G+ +H +V++ G + + V ++L
Sbjct: 156 ESLGLFLDMRREGMHPDEFGLGSVSRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLA 215
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
+Y + G ++ + + + +IVS N +I +
Sbjct: 216 HMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQ------------------------ 251
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
NG E AL+ F M+ V A+ VT +S C++ AAL G++I
Sbjct: 252 ---------------NGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQI 296
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
HG V++ ++K + V L++MY +CGCL + VF D ++MIS YG +G G
Sbjct: 297 HGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHG 356
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
+ A+ F++M+ G +P V F+A+L ACSH+GL EG F++M + + I+P ++HY C
Sbjct: 357 QKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGIQPSVKHYTC 416
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
+VDLLGR+G L EA ++ +MP+ P+ +W TLL++C+ KN D+AE +A ++ L
Sbjct: 417 VVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHD 476
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
+ SY+LLSNI A S RW D ++VR + + ++K G SW+E+K IH F +G+
Sbjct: 477 SASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQ 536
Query: 675 KNVCEVLEELALQMENKGCVPDNDIILWEM 704
K + E LEE+ ++ G PD ++L +M
Sbjct: 537 KEIDECLEEMMAKIRQCGYSPDMSMVLHDM 566
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 185/423 (43%), Gaps = 72/423 (17%)
Query: 19 RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGR 78
RPF + ++++ F HL + C+ + L+Q+H +GA F A ++ YA G
Sbjct: 33 RPFRGVLWSDAA-RLFSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGD 91
Query: 79 LFDARNVFETAP--------------------------FD--CKSSSLLWNSILRVNVSN 110
L AR +FE P FD + + WN+++ +
Sbjct: 92 LTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNL 151
Query: 111 GLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN 170
G E +L L++ MR+ G+ D F V R C + G+ VH +V++ G +
Sbjct: 152 GFDEESLGLFLDMRREGMHPDEFGLGSVSRCCAGLRDV----VTGRQVHAYVVRSGLDRD 207
Query: 171 VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
+ + + L MY + G + + + + + +S N + +G N D +GALE F M
Sbjct: 208 MCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRS 267
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
G+ + VT+ S +SS C+DLAA
Sbjct: 268 VGVAADVVTFVSAISS-----------------------------------CSDLAALAQ 292
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
G+ IHG V+K G + V V L+ +Y + G + ++ +F + +A+I++Y
Sbjct: 293 GQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGF 352
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
G +A+E+F Q+ ++GG+ P+ +++ A++ A + +G EE +D F M +
Sbjct: 353 HGHGQKAIELFKQM--MNGGA--EPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGIQ 408
Query: 411 NSV 413
SV
Sbjct: 409 PSV 411
>gi|297827241|ref|XP_002881503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327342|gb|EFH57762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 669
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 209/670 (31%), Positives = 342/670 (51%), Gaps = 61/670 (9%)
Query: 34 FDHLLQQCKTIHQLK----QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA 89
+ HL+Q T H+L Q+H +++V FLA++++S Y R R A +VF+
Sbjct: 25 YGHLIQHF-TRHRLPLHALQLHARIVVFSIAPDNFLASKLISFYTRQNRFHQALHVFDEI 83
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP------LVIRACK 143
++ +N++L S +Y +A L++ G P V++A
Sbjct: 84 TV---RNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSGAARPDSISISCVLKALS 140
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
F + S + VH V++ G +V + N LI Y K + + K+FD++ ++ +
Sbjct: 141 GCDDF-WLGSLARQVHGFVIRGGSDSDVFVGNGLITYYTKCDNIESARKVFDEMSDRDVV 199
Query: 204 SWNMMFSGFALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
SWN M SG++ + + +L+K M +PN VT S+L + CG+ + +F M
Sbjct: 200 SWNSMISGYSQSGSFEDCKKLYKAMLGCSDFKPNEVTVISVLQA---CGQSSDL--VFGM 254
Query: 263 -MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
+ K+ IE I + LS+C NA+I Y K G
Sbjct: 255 EVHKKMIE---NHIQMDLSLC----------------------------NAVIGFYAKCG 283
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
+ A+ LF E+ EK+ V++ A+I+ Y GL EA+ +FS++E + + +W+
Sbjct: 284 SLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI--------GLSTWN 335
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
AVI N EE ++ FR+M N+VT+S LL S+ L G+EIH +R
Sbjct: 336 AVISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRN 395
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
+ NI V +++ Y K G L VF+ + + LI W ++I+ Y ++G ++A + F
Sbjct: 396 GSDNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIVWTAIITAYAVHGDSDSACSLF 455
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
++M G KPD V AVLSA +H+G ++ + IFD M+ ++ IEP +EHYACMV +L R
Sbjct: 456 DQMQCLGTKPDNVTLTAVLSAFAHSGDSDKAQHIFDSMLTKYNIEPGVEHYACMVSVLSR 515
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLL 621
AG L A + + MP+EP A VWG LLN + + ++A ++F + E TG+Y ++
Sbjct: 516 AGKLSNAMEFISKMPIEPIAKVWGALLNGASVLGDVEIARFACDRLFEMEPENTGNYTIM 575
Query: 622 SNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVL 681
+N+Y +GRWE+A VR K GLKK+ G SWIE + + F + +S K + +++
Sbjct: 576 ANLYTQAGRWEEAEVVRDKMKRIGLKKIPGTSWIETNKGLRSFIAKDSSCERSKEMYDII 635
Query: 682 EELALQMENK 691
E L M +K
Sbjct: 636 EGLVESMSDK 645
>gi|195651407|gb|ACG45171.1| CRR4 [Zea mays]
Length = 601
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 190/624 (30%), Positives = 325/624 (52%), Gaps = 62/624 (9%)
Query: 82 ARNVFETAPFDCKSSSLLWNSIL-RVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR 140
AR++F+ P + + S+L ++++ L E L+ R+ G + G PLV++
Sbjct: 31 ARHLFDAVPRPTAALCCAFVSVLSKLSLHQELIEAVSSLH---RRGGAIPSG-CIPLVLK 86
Query: 141 ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
+C + G H H L G G+V + L+ YAK G M + F+++ +K
Sbjct: 87 SCALSAAS----CQGTQTHCHALVRGMLGDVFVQTALVDFYAKNGNMDSAVMAFEEMPIK 142
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
+ I N + G++ + D + A LF M + +W S+++ +A G +E + LF
Sbjct: 143 DPIPMNCLIIGYSRSGDVEEARRLFDSMPRK----TSASWNSMIACYAHGGEFQEALTLF 198
Query: 261 DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
D M + G A I V S+CA K
Sbjct: 199 DQMLREGASPNAITITTVFSICA-----------------------------------KT 223
Query: 321 GDVKV---AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
GD++ A+ SE + +N++ AL+ Y + DEA F + M R +V
Sbjct: 224 GDLETGRRAKAWVSEEDLQNVIVHTALMEMYVKCRAIDEARREFDR--------MPRRDV 275
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
++WS +I ++ NGR E+L+LF +M+ N VT+ G+LS CA+ + +G +I +
Sbjct: 276 VAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGSY 335
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
+ ++ + + L++MY KCG + VF ++E+K +I WNSMI G +NG E+A
Sbjct: 336 IESQTLPLTSYLGSALIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNGFAEDA 395
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR-EFRIEPQMEHYACMV 556
+A + EM+ G +P+ + F+A+L+AC+HAGLV++G F M + + PQ+EH AC+V
Sbjct: 396 IALYGEMVGDGVQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNKQHASPQVEHCACIV 455
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
DLL ++G L EA + +M +EPNA +W TLL++CR H + ++A+ A ++ L ++
Sbjct: 456 DLLCKSGRLWEAYKFICDMEVEPNAVIWTTLLSACRAHADVELAKLAAGKLVVLEPNSSS 515
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKN 676
Y+LLSNIYA +G W D ++R ++K L+K++ SWIE+ ++H F ++
Sbjct: 516 IYVLLSNIYADAGLWGDVREIRDLMRSKNLQKLSAYSWIELDGEVHRFLVQDTYHPRSAE 575
Query: 677 VCEVLEELALQMENKGCVPDNDII 700
+ V++ L LQ+E PD+++I
Sbjct: 576 IYNVVDGLGLQLERTS--PDHELI 597
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 156/335 (46%), Gaps = 47/335 (14%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y+R G + +AR +F++ P + +S WNS++ G ++ AL L+ +M + G +
Sbjct: 154 YSRSGDVEEARRLFDSMP---RKTSASWNSMIACYAHGGEFQEALTLFDQMLREGASPNA 210
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
T V C G V LQ NV + L+ MY K + ++ +
Sbjct: 211 ITITTVFSICAKTGDLETGRRAKAWVSEEDLQ-----NVIVHTALMEMYVKCRAIDEARR 265
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
FD++ ++ ++W+ M +G++ N +LELF+RM+ +PN VT
Sbjct: 266 EFDRMPRRDVVAWSTMIAGYSHNGRPHESLELFERMKATNCKPNEVT------------- 312
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
+ VLS CA L +D +G+ I ++ ++ +A
Sbjct: 313 ----------------------LVGVLSACAQLGSDELGEQIGSYIESQTLPLTSYLGSA 350
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
LI +Y K G V A+++F +E+K +++WN++I A G ++A+ ++ ++ G
Sbjct: 351 LIDMYTKCGHVARARDVFHRMEQKVVIAWNSMIRGLALNGFAEDAIALYGEMV----GDG 406
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
+PN I++ A++ A G ++ + F++M+ K
Sbjct: 407 VQPNEITFLALLTACTHAGLVDKGMAFFQEMKKNK 441
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 138/300 (46%), Gaps = 21/300 (7%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++ +Y + + +AR F+ P + + W++++ NG +L+L+ +M+
Sbjct: 250 LMEMYVKCRAIDEARREFDRMP---RRDVVAWSTMIAGYSHNGRPHESLELFERMKATNC 306
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ T V+ AC +GS G + + L + ++ + LI MY K G ++
Sbjct: 307 KPNEVTLVGVLSACAQLGSDELGEQIGSYIESQTLPL----TSYLGSALIDMYTKCGHVA 362
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ +F ++ K I+WN M G ALN + A+ L+ M +G++PN +T+ +LL++
Sbjct: 363 RARDVFHRMEQKVVIAWNSMIRGLALNGFAEDAIALYGEMVGDGVQPNEITFLALLTACT 422
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAE---AIAVVLSVCADLAADHMGKV--IHGFVIKGGF 303
G +++ M F M+K + +V +C G++ + F+
Sbjct: 423 HAGLVDKGMAFFQEMKKNKQHASPQVEHCACIVDLLCKS------GRLWEAYKFICDMEV 476
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSE--IEEKNIVSWNALITS-YAEAGLCDEAVEV 360
E + L+ H DV++A+ + + E N S L+++ YA+AGL + E+
Sbjct: 477 EPNAVIWTTLLSACRAHADVELAKLAAGKLVVLEPNSSSIYVLLSNIYADAGLWGDVREI 536
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/499 (32%), Positives = 273/499 (54%), Gaps = 40/499 (8%)
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
PN + + +L+ C E+ + + M + + + + + ++ C L G+ +
Sbjct: 39 PNVLVFNALIRGCVHCCYSEQALVHYMHMLRNNVMPTSYSFSSLIKACTLLVDSAFGEAV 98
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDV------------------------------- 323
HG V K GF+ +VFV+ LI Y GDV
Sbjct: 99 HGHVWKHGFDSHVFVQTTLIEFYSTFGDVGGSRRVFDDMPERDVFAWTTMISAHVRDGDM 158
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
A LF E+ EKN+ +WNA+I Y + G + A +F+Q+ D +ISW+ +
Sbjct: 159 ASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQMPARD--------IISWTTM 210
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
+ ++ N R +E + LF + ++ + VT++ ++S CA AL +G+E+H ++V
Sbjct: 211 MNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGALALGKEVHLYLVLQGF 270
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEE 503
+ ++ + + L++MY KCG ++ LVF +++ K+L WN +I G +G E AL F E
Sbjct: 271 DLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATHGYVEEALRMFGE 330
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M +P+ V F+++L+AC+HAG + EGRR F MV+++ I PQ+EHY CMVDLL +AG
Sbjct: 331 MERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEHYGCMVDLLSKAG 390
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
LL++A ++++NM +EPN+++WG LLN C++HKN ++A + L +G Y LL N
Sbjct: 391 LLEDALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIAHIAVQNLMVLEPSNSGHYSLLVN 450
Query: 624 IYAASGRWEDAAKVRISAKTKGL-KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLE 682
+YA RW + AK+R + K G+ K+ G SW+E+ + +H+F++ ++ + +L
Sbjct: 451 MYAEENRWNEVAKIRTTMKDLGVEKRCPGSSWVEINKTVHLFAASDTYHPSYSQLHLLLA 510
Query: 683 ELALQMENKGCVPDNDIIL 701
EL Q+ G VP+ IL
Sbjct: 511 ELDDQLRLAGYVPELGSIL 529
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 212/467 (45%), Gaps = 55/467 (11%)
Query: 54 LIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLY 113
+I T FL + +S + + A + F + L++N+++R V
Sbjct: 1 MIKTNTTQDCFLVNQFISACSNLSCINLAASAFANVQ---NPNVLVFNALIRGCVHCCYS 57
Query: 114 ENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHI 173
E AL Y+ M + V+ ++F +I+AC + +FG+ VH HV + GF +V +
Sbjct: 58 EQALVHYMHMLRNNVMPTSYSFSSLIKACTLL----VDSAFGEAVHGHVWKHGFDSHVFV 113
Query: 174 VNELIGMYAKM-------------------------------GQMSDSFKLFDKVRVKNY 202
LI Y+ G M+ + +LFD++ KN
Sbjct: 114 QTTLIEFYSTFGDVGGSRRVFDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNV 173
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
+WN M G+ + + A LF +M + ++WT++++ ++R R +E + LF
Sbjct: 174 ATWNAMIDGYGKLGNAESAEFLFNQMPAR----DIISWTTMMNCYSRNKRYKEVIALFHD 229
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
+ +G+ + V+S CA L A +GK +H +++ GF+ V++ ++LI +Y K G
Sbjct: 230 VIDKGMIPDEVTMTTVISACAHLGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGS 289
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
+ +A +F +++ KN+ WN +I A G +EA+ +F ++E+ RPN +++ +
Sbjct: 290 IDMALLVFYKLQTKNLFCWNCIIDGLATHGYVEEALRMFGEMER----KRIRPNAVTFIS 345
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG-LLSVCAESAALNIGREIHGHVVRV 441
++ A G EE F M +A V G ++ + +++ L E+ + +
Sbjct: 346 ILTACTHAGFIEEGRRWFMSMVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEM---IRNM 402
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
++ N + LLN GC +L I ++L+ SG+
Sbjct: 403 TVEPNSFIWGALLN-----GCKLHKNLEIAHIAVQNLMVLEPSNSGH 444
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 143/324 (44%), Gaps = 40/324 (12%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
Y + G A +F P + W +++ N Y+ + L+ + G++ D
Sbjct: 183 YGKLGNAESAEFLFNQMP---ARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDE 239
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
T VI AC +G+ + G+ VH +++ GF +V+I + LI MYAK G + +
Sbjct: 240 VTMTTVISACAHLGAL----ALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALL 295
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+F K++ KN WN + G A + + AL +F ME + + PN VT+ S+L++ G
Sbjct: 296 VFYKLQTKNLFCWNCIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGF 355
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV----- 307
+EE F +++V C +H G ++ G ED +
Sbjct: 356 IEEGRRWF--------------MSMVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRN 401
Query: 308 -------FVKNALICVYGKHGDVKVA----QNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
F+ AL+ H ++++A QNL +E N ++ L+ YAE +E
Sbjct: 402 MTVEPNSFIWGALLNGCKLHKNLEIAHIAVQNLMV-LEPSNSGHYSLLVNMYAEENRWNE 460
Query: 357 AVEVFSQLEKLDGGSMERPNVISW 380
++ + ++ L G +R SW
Sbjct: 461 VAKIRTTMKDL--GVEKRCPGSSW 482
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 117/301 (38%), Gaps = 66/301 (21%)
Query: 370 GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALN 429
+++ PNV+ ++A+I E+AL + M V+ S + S L+ C
Sbjct: 34 ANVQNPNVLVFNALIRGCVHCCYSEQALVHYMHMLRNNVMPTSYSFSSLIKACTLLVDSA 93
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW-------- 481
G +HGHV + + ++ VQ L+ Y G + VF+ + ++D+ W
Sbjct: 94 FGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFGDVGGSRRVFDDMPERDVFAWTTMISAHV 153
Query: 482 -----------------------NSMISGYGMNGLGENA--------------------- 497
N+MI GYG G E+A
Sbjct: 154 RDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQMPARDIISWTTMMNC 213
Query: 498 ----------LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE-FRIE 546
+A F ++I+ G PD V V+SAC+H G + G+ + +V + F ++
Sbjct: 214 YSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGALALGKEVHLYLVLQGFDLD 273
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
+ + ++D+ + G + A + + + N + W +++ H + A M +
Sbjct: 274 VYIG--SSLIDMYAKCGSIDMALLVFYKLQTK-NLFCWNCIIDGLATHGYVEEALRMFGE 330
Query: 607 I 607
+
Sbjct: 331 M 331
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 196/590 (33%), Positives = 302/590 (51%), Gaps = 43/590 (7%)
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
F ++R+CK + Q V ++ GFQ N ++ ++ + + QM+ + LF
Sbjct: 28 FISLLRSCKTVALL-------QKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLF 80
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
D WN + G+ N + LF +M+ + PN T+ +L S A+ G
Sbjct: 81 DHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFV 140
Query: 255 ETMDLFDMMRKRGIE-------------VGAEAIAVVLSVCADLAADHM---GKVIHGFV 298
E ++ + K G+E G AI + + ++ +I G++
Sbjct: 141 EGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYI 200
Query: 299 IKG-----------GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+ E V + N ++ Y + GD+K A+ LF + ++ +SWN ++
Sbjct: 201 LCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNG 260
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL-A 406
YA G + ++F + M NV SW+ +IG +A NG E L F++M +
Sbjct: 261 YANNGDVEACEQLFEE--------MPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDG 312
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
VV N T+ +LS CA AL++G+ +H + + +I V N L++MY KCG +E
Sbjct: 313 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENA 372
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
VFE ++ KDLITWNSMI G +G G +AL F +M G KPDG+ F+ VL +C+H
Sbjct: 373 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 432
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GLV EG F+ MV E+ I PQ+EHY CMVDL GRAGLL A + VK MPME +A +W
Sbjct: 433 GLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 492
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL +CR++KN D+AE ++ L + +Y+LLSNIY GRW+D A+++I + G
Sbjct: 493 LLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGS 552
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
KK+ G S IEV + F S + S K + VL+ L + + G P+
Sbjct: 553 KKLPGCSLIEVNDSVVEFYSLDERHSQSKEIYGVLKGLMKLLRSFGYGPN 602
Score = 156 bits (394), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 219/480 (45%), Gaps = 72/480 (15%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F LL+ CKT+ L++V Q+I G + ++A V++ + ++ AR++F+ P D
Sbjct: 28 FISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP-DP 86
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K LWN+I R N Y + L+ KM+ + V + FTFPLV+++C +G+ F
Sbjct: 87 KVE--LWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGA----FV 140
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK--------------------- 192
G+ +H V++ G +GN + LI +Y+ + ++K
Sbjct: 141 EGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYI 200
Query: 193 ----------LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM-------------- 228
LFD ++ + WN+M SG+ D A +LF M
Sbjct: 201 LCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLNG 260
Query: 229 -----ELEGLEP--------NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
++E E N +W L+ +A G E + F M G+ V +A
Sbjct: 261 YANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVVPNDAT 320
Query: 276 AV-VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
V VLS CA L A +GK +H + GF+ ++V NALI +Y K G ++ A +F ++
Sbjct: 321 LVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESMD 380
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
K++++WN++I A G +A+ +F Q+ K++G E+P+ I++ V+ + G E
Sbjct: 381 LKDLITWNSMICGLATHGCGADALTLFHQM-KING---EKPDGITFIGVLCSCTHLGLVE 436
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
E F M +A + G + A L + R I V R+ M + ++ LL
Sbjct: 437 EGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGL-LDRAIE-FVKRMPMEADAVIWAALL 494
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 201/638 (31%), Positives = 333/638 (52%), Gaps = 88/638 (13%)
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDC--KSSSLLWNSILRVNVSNGLYENALKLYV 121
F+ + + +YA G + AR +F DC + ++ +WN+++ V N A+ L+V
Sbjct: 256 FVVSSAIFMYAELGCVDFAREIF-----DCCLERNTEVWNTMIGGYVQNNCPIEAIDLFV 310
Query: 122 K-MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
+ M D TF + A + ++ G+ +H ++L+ V I+N +I M
Sbjct: 311 QVMESEQFXLDDVTF---LSALTAISQLQW-LDLGRQLHAYILKSSTILQVVILNAIIVM 366
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
Y++ G + SFK+F + LE + VTW
Sbjct: 367 YSRCGSIGTSFKVFSNM-----------------------------------LERDVVTW 391
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
+++S+ + G +E + L M+K+G V + + +LS+ ++L + +GK H ++I+
Sbjct: 392 NTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIR 451
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
G + + + LI +Y K G + AQ LF EKN + Y DEA
Sbjct: 452 HGIQ-FEGMDGYLIDMYAKSGLITTAQQLF----EKN--------SXYDR----DEA--- 491
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
+W+A+I + NG EE +FRKM V N+VT++ +L
Sbjct: 492 ------------------TWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILP 533
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
C + +G++IHG +R +N+N+ V LL+MY K G + VF + +K+ +T
Sbjct: 534 ACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVT 593
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
+ +MI YG +G+GE AL+ F M+ +G KPD V FVA+LSACS+AGLV+EG RIF M
Sbjct: 594 YTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSME 653
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAY-VWGTLLNSCRMHKNTDV 599
RE++I+P EHY C+ D+LGR G + EA + VK + E N + +WG+LL +CR+H ++
Sbjct: 654 REYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFEL 713
Query: 600 AEAMASQIFGLI--TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
+ +A+++ + + TG ++LLSNIYAA G W++ +VR + KGL K AG SW+EV
Sbjct: 714 GKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEV 773
Query: 658 KRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
++ F S + + ++LE+LA++M++ G P
Sbjct: 774 AGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKP 811
Score = 172 bits (436), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 147/607 (24%), Positives = 263/607 (43%), Gaps = 128/607 (21%)
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR-KLGV 128
LS R G A ++F++ P + +++LWN+I+ + N + +AL Y +MR
Sbjct: 44 LSHLCRQGHPHQALHLFDSIP---RPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSP 100
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK----- 183
D +TF ++AC S + G+ +H HVL+ F + + N L+ MY+
Sbjct: 101 KFDSYTFSSTLKACAQARSLKL----GKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEV 156
Query: 184 --MGQMSD------SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
+G D ++FD +R +N ++WN M S + A ++F+ M G+ P
Sbjct: 157 PYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRP 216
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
V++ ++ + R M+ +D V++
Sbjct: 217 TPVSFVNVFPAVWR-------MNDYD----------------------------NANVLY 241
Query: 296 GFVIKGGFEDYV---FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
G V+K G DYV FV ++ I +Y + G V A+ +F E+N WN +I Y +
Sbjct: 242 GLVVKLG-SDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNN 300
Query: 353 LCDEAVEVF-----------------------SQLEKLDGG------------------- 370
EA+++F SQL+ LD G
Sbjct: 301 CPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVIL 360
Query: 371 ---------------------SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+M +V++W+ ++ AF NG +E L L +MQ +
Sbjct: 361 NAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFM 420
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
+SVT++ LLS+ + + IG++ H +++R + + L++MY K G + +
Sbjct: 421 VDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGM-DGYLIDMYAKSGLITTAQQL 479
Query: 470 FEQ--IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
FE+ +D TWN+MI+GY NGL E A F +MIE +P+ V ++L AC+ G
Sbjct: 480 FEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMG 539
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
+ G++I +R F + + ++D+ ++G + A ++ +E N+ + T+
Sbjct: 540 TIGLGKQIHGFAIRCF-LNQNVFVGTALLDMYSKSGAITYAENVFAE-TLEKNSVTYTTM 597
Query: 588 LNSCRMH 594
+ S H
Sbjct: 598 ILSYGQH 604
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 37/268 (13%)
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA-NSVTISGLLSVCAESAALN 429
S+ RP + W+ +I F N +AL + +M+ + +S T S L CA++ +L
Sbjct: 62 SIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKACAQARSLK 121
Query: 430 IGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL--------------VFEQIEK 475
+G+ +H HV+R + +V N LLNMY C E +L VF+ + K
Sbjct: 122 LGKALHCHVLRSHFGSSRIVYNSLLNMYSTC-LTEVPYLGTAYDFNNCDLVRRVFDTMRK 180
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
++++ WN+MIS Y A F M+ G +P V+FV V A + +
Sbjct: 181 RNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVL 240
Query: 536 FDMMVRE--------FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
+ ++V+ F + + YA LG +E D +E N VW T+
Sbjct: 241 YGLVVKLGSDYVDDFFVVSSAIFMYA----ELGCVDFAREIFDCC----LERNTEVWNTM 292
Query: 588 L-----NSCRMHKNTDVAEAMASQIFGL 610
+ N+C + + M S+ F L
Sbjct: 293 IGGYVQNNCPIEAIDLFVQVMESEQFXL 320
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
TI KQ+H I N + F+ +L +Y++ G + A NVF + +S+ + +
Sbjct: 540 TIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAET---LEKNSVTYTT 596
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
++ +G+ E AL L+ M G+ D TF ++ AC + G
Sbjct: 597 MILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAG 640
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 202/662 (30%), Positives = 332/662 (50%), Gaps = 83/662 (12%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
Q + + Q+H ++ +G + ++ ++ Y++ G + +AR VF+ + +++
Sbjct: 163 QLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQL---SEKTAVT 219
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
W +I+ G +L+L+ +MR+ V+ D + V+ AC + G+ +H
Sbjct: 220 WTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEG----GKQIH 275
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+VL+ G + +V +VN LI Y K ++ KLFD++ VKN IS
Sbjct: 276 AYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIIS--------------- 320
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
WT+++S + + E M LF M + G + A VL
Sbjct: 321 --------------------WTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVL 360
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
+ C A G+ +H + IK E FVKN LI +Y
Sbjct: 361 TSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMY---------------------- 398
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
A++ L +A +VF M NVIS++A+I ++S + EAL+L
Sbjct: 399 ---------AKSNLLIDAKKVFD--------VMAEQNVISYNAMIEGYSSQEKLSEALEL 441
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
F +M++ N T + L++ + A+L G++ H +V++ ++ V N L++MY K
Sbjct: 442 FHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAK 501
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
CG +EE +F +D++ WNSMIS + +G E AL F EM++ G +P+ V FVAV
Sbjct: 502 CGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAV 561
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
LSACSHAG V +G F+ M F I+P EHYAC+V LLGR+G L EA + ++ MP+EP
Sbjct: 562 LSACSHAGRVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEP 620
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRI 639
A VW +LL++CR+ N ++ + A + +GSY+LLSNI+A+ G W D KVR
Sbjct: 621 AAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRD 680
Query: 640 SAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDI 699
+ + K G+SWIEV K+++F + ++ + ++ VL+ L ++ G VPD
Sbjct: 681 RMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHRE-ADIGSVLDILIQHIKGAGYVPDATA 739
Query: 700 IL 701
+L
Sbjct: 740 LL 741
>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/583 (31%), Positives = 301/583 (51%), Gaps = 83/583 (14%)
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M +LG+ D FTFP +I+AC + F FG +H V++ G+Q V I N LI MY
Sbjct: 1 MLRLGIQPDNFTFPFIIKACSCLR----HFEFGIRIHQDVVKFGYQSQVFISNSLITMYG 56
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K + S ++FD++ KN +S W++
Sbjct: 57 KCDKYELSRQVFDEMPDKNAVS-----------------------------------WSA 81
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
++ + + R +E LF M G AI L+ A + + ++ V++ G
Sbjct: 82 IIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAI---LNAMACVRSHEEADDVYRVVVENG 138
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
+ V++A ++ + G V+VA+ LF I K++V+
Sbjct: 139 LDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVT---------------------- 176
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
W+ I A+ EAL L ++M L + +++T+ G++ C
Sbjct: 177 -----------------WATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRAC 219
Query: 423 AESAALNIGREIHGHVVR-VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
+ A+ + +HG + N+ + V+ L+++Y+KCG L VF+ ++++++ITW
Sbjct: 220 STLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITW 279
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
++MISGYGM+G G AL F++M +A KPD + FV++LSACSH+GLV EG F+ M R
Sbjct: 280 SAMISGYGMHGWGREALNLFDQM-KASVKPDHITFVSILSACSHSGLVAEGWECFNSMAR 338
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
+F + P+ EHYACMVD+LGRAG L EA D ++ MP+ PNA VWG LL +CR+H N D+AE
Sbjct: 339 DFGVTPRPEHYACMVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAE 398
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI 661
+A +F L G Y++L NIY +G+ ++A +R K +G+KK+AG S IE+K K+
Sbjct: 399 MVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKL 458
Query: 662 HMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ F +G+ + LE L ++ +G PD + +L ++
Sbjct: 459 YAFVAGDRSHPQTDLIYSELERLMDRIRQEGYTPDINFVLHDV 501
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 168/374 (44%), Gaps = 54/374 (14%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +++ C + + ++H ++ G + F++ ++++Y + + +R VF+ P
Sbjct: 13 FPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDEMP 72
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+++ W++I+ + + + L+ +M G + P M R
Sbjct: 73 ---DKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEG------SRPSRGAILNAMACVR- 122
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
V+ V++ G + + + GM+A+ G++ + KLFD + K+ ++W
Sbjct: 123 SHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIE 182
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
+ AL L K+M L+G+ P+ +T LL
Sbjct: 183 AYVKADMPLEALGLLKQMMLQGIFPDAIT---LLG------------------------- 214
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF-VKNALICVYGKHGDVKVAQNL 329
V+ C+ LA+ + ++HG + G F + + V+ ALI +Y K G + A+ +
Sbjct: 215 -------VIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLTYARKV 267
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
F ++E+NI++W+A+I+ Y G EA+ +F Q++ + +P+ I++ +++ A +
Sbjct: 268 FDGMQERNIITWSAMISGYGMHGWGREALNLFDQMK-----ASVKPDHITFVSILSACSH 322
Query: 390 NGRGEEALDLFRKM 403
+G E + F M
Sbjct: 323 SGLVAEGWECFNSM 336
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 119/243 (48%), Gaps = 12/243 (4%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
++ + V+ ++ G + + + ++AR GR+ AR +F+ + W
Sbjct: 122 RSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGI---MSKDLVTWA 178
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
+ + V + AL L +M G+ D T VIRAC + SF+ IVH
Sbjct: 179 TTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQL----AHIVHG- 233
Query: 162 VLQMGFQGN--VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
++ GF N + + LI +Y K G ++ + K+FD ++ +N I+W+ M SG+ ++
Sbjct: 234 IITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGR 293
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIEVGAEAIAVV 278
AL LF +M+ ++P+ +T+ S+LS+ + G + E + F+ M R G+ E A +
Sbjct: 294 EALNLFDQMK-ASVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACM 352
Query: 279 LSV 281
+ +
Sbjct: 353 VDI 355
>gi|296089956|emb|CBI39775.3| unnamed protein product [Vitis vinifera]
Length = 599
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/455 (36%), Positives = 256/455 (56%), Gaps = 33/455 (7%)
Query: 292 KVIHGFVIK--GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS--WNALITS 347
+ +H +IK + L+C + AQ +F +E++ + WN+ + +
Sbjct: 78 RQVHAQIIKTNAPLSILPLTRVGLVCAFTP--SFHYAQQIFKCVEKQKPETFVWNSCLKA 135
Query: 348 YAEAGLCDEAVEVFSQLEKLD---------------------------GGSMERPNVISW 380
AE +A+ +F +L + D G +E+ SW
Sbjct: 136 LAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSW 195
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
+++I + G+ +EA+ LF KM+ A V N VT+ +L+ CA+ AL++G IH + R
Sbjct: 196 TSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNR 255
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
+N+ + N L++MY+KCGCLEE VFE++E++ +++W++MI G M+G E AL
Sbjct: 256 HGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRL 315
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F +M + G +P+GV F+ +L ACSH GL++EGRR F M R++ I PQ+EHY CMVDLL
Sbjct: 316 FSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLS 375
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML 620
RAGLL EA + + NMPM+PN VWG LL +CR+HKN ++AE + L G Y++
Sbjct: 376 RAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVV 435
Query: 621 LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEV 680
LSNIYA +GRWED A+VR K + +KK G S I V +H F +G D + + +
Sbjct: 436 LSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQR 495
Query: 681 LEELALQMENKGCVPDNDIILWEMMGKKNVKRIQR 715
EEL +M KG VP+ ++L ++ + VK + R
Sbjct: 496 WEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSR 530
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 168/402 (41%), Gaps = 52/402 (12%)
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C F SF + + V + + N + A+ D+ LF R++
Sbjct: 103 CAFTPSFHYAQQIFKCVEKQ------KPETFVWNSCLKALAEGDSPIDAIMLF--YRLRQ 154
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGL--EPNFVTWTSLLSSHARCGRLEETMDL 259
Y F+ ++ C L+L L G+ + F +WTS+++ + +CG+ +E + L
Sbjct: 155 YDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSWTSMIAGYVQCGKAKEAIHL 214
Query: 260 FDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK 319
F M + G++ + VL+ CADL A +G IH + + GF+ V + N LI +Y K
Sbjct: 215 FAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVK 274
Query: 320 HGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVIS 379
G ++ A +F E+EE+ +VSW+A+I A G +EA+ +FS + ++
Sbjct: 275 CGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVG----------- 323
Query: 380 WSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVV 439
+ N VT GLL C+ ++ GR +
Sbjct: 324 ----------------------------IEPNGVTFIGLLHACSHMGLISEGRRFFASMT 355
Query: 440 R-VSMNKNILVQNGLLNMYMKCGCLEEGH-LVFEQIEKKDLITWNSMISGYGMNGLGENA 497
R + I ++++ + G L E H + K + + W +++ ++ E A
Sbjct: 356 RDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMA 415
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+ ++E DG +V + + + AG + R+ M
Sbjct: 416 EEAIKHLLELDPLNDGY-YVVLSNIYAEAGRWEDTARVRKFM 456
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 195/638 (30%), Positives = 313/638 (49%), Gaps = 91/638 (14%)
Query: 69 VLSIYARFGRLFDARNVFE-TAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG 127
+LS Y +FG + +A +F+ T+ DC S WN +L V N L ++KMR
Sbjct: 87 ILSGYFKFGLVSEAIKLFDGTSKRDCHS----WNIVLSGCVKNHKLGEGLTHFMKMRCSS 142
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
V D FT+ ++I C FGQ VH ++++ + I L+ MYA++G++
Sbjct: 143 VRPDNFTYAIIIPCCDL--------GFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEI 194
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
D+ K+FD M GL VTW +++S +
Sbjct: 195 GDARKVFDG-------------------------------MPSRGL----VTWNAMISCY 219
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
++ GR ++++ LF + + GI A+VL+ A +H +I+ GF
Sbjct: 220 SKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDR 279
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
F NAL+ +Y K G A +F ++
Sbjct: 280 FTNNALVNLYSK-------------------------------CGYVASASRLFEEIPDQ 308
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
D V+SW+ +I F +G EEA+ LF +MQL + NS T GLL CA++ A
Sbjct: 309 D--------VVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANA 360
Query: 428 LNIGREIHGHVVRVSM-NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
GR HG V++ + +++V + +++MY KCG + + F+++ ++D+ +WN +I
Sbjct: 361 FQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIIC 420
Query: 487 GYGMNGLGENALATFEEMI---EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
GY NG G AL + EM+ +G P+ V FV VL ACSH GL+ EG F MV +
Sbjct: 421 GYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKH 480
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
I+P EHY CMVDLLGRAGLLQEA ++ +P++P+ +WG LL +C++H + +
Sbjct: 481 LIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGACKLHGDVQMTRRT 540
Query: 604 ASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHM 663
A ++ + +Y+LL+N Y G W +A ++R + +G++K AG SW+E+ +H
Sbjct: 541 AEHLYTNEPRNSSNYVLLANSYTDIGEWGEAVEIREVMEARGVEKTAGCSWVEIGTCMHS 600
Query: 664 FSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
F +G+ L ++ +VL L LQM + C +L
Sbjct: 601 FLAGDXLHPQIEVASQVLPRLYLQMRERSCTHRKKTLL 638
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 182/371 (49%), Gaps = 47/371 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+QVH ++ ++ AF+ +L +YA G + DAR VF+ P + WN+++
Sbjct: 163 QQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMP---SRGLVTWNAMISCY 219
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
G + ++ L+ ++ + G+ D +T+ +V+ +F R++ VH+ +++ GF
Sbjct: 220 SKYGRGDKSIGLFRQLXREGISADEYTYAIVLN--EFAA--RWQVFEAMQVHSLIIERGF 275
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ N L+ +Y+K G ++ + +LF+++ ++ +SW ++ GF + + A+ LF +
Sbjct: 276 CSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQ 335
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M+L +EPN T+ LL + CAD A
Sbjct: 336 MQLGDIEPNSFTFGGLLGA-----------------------------------CADANA 360
Query: 288 DHMGKVIHGFVIKGGFEDY-VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
G+ HG V+K G V V +A++ +Y K G++ A F E+ E++I SWN +I
Sbjct: 361 FQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIIC 420
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM--- 403
YA+ G +A+++++++ L G S PN +++ V+ A + NG +E F++M
Sbjct: 421 GYAQNGAGMKALKLYNEMVLL-GPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDK 479
Query: 404 QLAKVVANSVT 414
L K A T
Sbjct: 480 HLIKPTAEHYT 490
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 151/339 (44%), Gaps = 49/339 (14%)
Query: 289 HMGK--VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
HM K V+H ++K G +V+ N L+ Y + A L + + ++VS+N +++
Sbjct: 30 HMYKAPVLHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILS 89
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
Y + GL EA+++F K D SW+ V+ N + E L F KM+ +
Sbjct: 90 GYFKFGLVSEAIKLFDGTSKRD--------CHSWNIVLSGCVKNHKLGEGLTHFMKMRCS 141
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
V ++ T + ++ C L G+++H +V+V + + + LL MY + G + +
Sbjct: 142 SVRPDNFTYAIIIPCCD----LGFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDA 197
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
VF+ + + L+TWN+MIS Y G G+ ++ F ++ G D + VL+ +
Sbjct: 198 RKVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAAR 257
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP---------- 576
V E ++ +++ + + A +V+L + G + AS + + +P
Sbjct: 258 WQVFEAMQVHSLIIERGFCSDRFTNNA-LVNLYSKCGYVASASRLFEEIPDQDVVSWTVI 316
Query: 577 ------------------------MEPNAYVWGTLLNSC 591
+EPN++ +G LL +C
Sbjct: 317 IVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGAC 355
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 165/341 (48%), Gaps = 23/341 (6%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
QVH+ +I G + F ++++Y++ G + A +FE P + W I+ +
Sbjct: 265 QVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIP---DQDVVSWTVIIVGFL 321
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+G E A+ L+ +M+ + + FTF ++ AC +F+ G+ H VL+ G
Sbjct: 322 QSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQ----KGRHFHGLVLKFGLL 377
Query: 169 G-NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
G +V + + ++ MY+K G+M D+ + F ++ ++ SWN + G+A N AL+L+
Sbjct: 378 GADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLYNE 437
Query: 228 MEL---EGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCA 283
M L G+ PN VT+ +L + + G L+E F +M+ K I+ AE ++ +
Sbjct: 438 MVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDL-- 495
Query: 284 DLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV----KVAQNLFSEIEEKNIV 339
L + + ++ + + AL+ HGDV + A++L++ E +N
Sbjct: 496 -LGRAGLLQEAEALILALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTN-EPRNSS 553
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
++ L SY + G EAVE+ E ++ +E+ SW
Sbjct: 554 NYVLLANSYTDIGEWGEAVEI---REVMEARGVEKTAGCSW 591
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCG----------CLEEGHLVFEQIEKKDLITWNSM 484
HGH+ + + LV+NGL+ +C L + H + + + ++++N++
Sbjct: 28 HGHMYKAPVLHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTI 87
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
+SGY GL A+ F + K D ++ VLS C + EG F M +R
Sbjct: 88 LSGYFKFGLVSEAIKLF----DGTSKRDCHSWNIVLSGCVKNHKLGEGLTHF-MKMRCSS 142
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVK 573
+ P YA ++ Q +DIVK
Sbjct: 143 VRPDNFTYAIIIPCCDLGFGQQVHADIVK 171
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 192/640 (30%), Positives = 330/640 (51%), Gaps = 85/640 (13%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
LA ++ Y G + +AR++F+ P + W +++ S+ A + + +M
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMP---DRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
K G + FT V+++C+ M ++G +VH V+++G +G++++ N ++ MYA
Sbjct: 104 KQGTSPNEFTLSSVLKSCRNMKVL----AYGALVHGVVVKLGMEGSLYVDNAMMNMYATC 159
Query: 185 G-QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
M + +F ++VKN VTWT+L
Sbjct: 160 SVTMEAACLIFRDIKVKN-----------------------------------DVTWTTL 184
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
++ G + ++ M EV I + + A + + GK IH VIK GF
Sbjct: 185 ITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGF 244
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
+ + V N+++ +Y + G + A++ F E+E+K++++WN LI S+
Sbjct: 245 QSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI----------------SE 288
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA 423
LE+ D EAL +F++ + V N T + L++ CA
Sbjct: 289 LERSDSS------------------------EALLMFQRFESQGFVPNCYTFTSLVAACA 324
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF-EQIEKKDLITWN 482
AALN G+++HG + R NKN+ + N L++MY KCG + + VF E +++++L++W
Sbjct: 325 NIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWT 384
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
SM+ GYG +G G A+ F++M+ +G +PD + F+AVLSAC HAGLV +G + F++M E
Sbjct: 385 SMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESE 444
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK-NTDVAE 601
+ I P + Y C+VDLLGRAG + EA ++V+ MP +P+ WG +L +C+ HK N ++
Sbjct: 445 YGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISR 504
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI 661
A ++ L + G+Y++LS IYAA G+W D A+VR + G KK AG SWI V+ ++
Sbjct: 505 LAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQV 564
Query: 662 HMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
F+ + + + +V VL L + G VP+ D ++
Sbjct: 565 FSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELDSLV 604
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 186/402 (46%), Gaps = 73/402 (18%)
Query: 26 YNNSLLDCFDHLLQQ---------------CKTIHQLKQ---VHNQLIVTGANASAFLAA 67
YN +CF +++Q C+ + L VH ++ G S ++
Sbjct: 91 YNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDN 150
Query: 68 RVLSIYARFGRLFDARN-VFETAPFDCK-SSSLLWNSILR--VNVSNGLYENALKLYVKM 123
++++YA +A +F D K + + W +++ ++ +G+ LK+Y +M
Sbjct: 151 AMMNMYATCSVTMEAACLIFR----DIKVKNDVTWTTLITGFTHLGDGI--GGLKMYKQM 204
Query: 124 RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
+ + +RA + S + G+ +H V++ GFQ N+ ++N ++ +Y +
Sbjct: 205 LLENAEVTPYCITIAVRASASIDSV----TTGKQIHASVIKRGFQSNLPVMNSILDLYCR 260
Query: 184 MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
G +S++ F ++ K+ I+WN + S + D AL +F+R E +G PN T+TSL
Sbjct: 261 CGYLSEAKHYFHEMEDKDLITWNTLISELERS-DSSEALLMFQRFESQGFVPNCYTFTSL 319
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
+++ CA++AA + G+ +HG + + GF
Sbjct: 320 VAA-----------------------------------CANIAALNCGQQLHGRIFRRGF 344
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEI-EEKNIVSWNALITSYAEAGLCDEAVEVFS 362
V + NALI +Y K G++ +Q +F EI + +N+VSW +++ Y G EAVE+F
Sbjct: 345 NKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
++ S RP+ I + AV+ A G E+ L F M+
Sbjct: 405 KMVS----SGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVME 442
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 205/662 (30%), Positives = 323/662 (48%), Gaps = 87/662 (13%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C I L ++VH ++ G + ++++Y + G + AR +F+ P
Sbjct: 199 FPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + WN+++ NG+ LKL+ MR L V D T VI AC+ +G R
Sbjct: 259 ---RRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H +V+ GF ++ + N L MY G ++ KLF ++
Sbjct: 316 ----GRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRM------------- 358
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
DC + V+WT+++S + E+ +D + MM + ++
Sbjct: 359 ------DC----------------KDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKP 396
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+A VLS CA L G +H IK YV V N LI +Y K
Sbjct: 397 DEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSK----------- 445
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
D+A+++F + R NVISW+++I N
Sbjct: 446 --------------------CKCIDKALDIFHNIP--------RKNVISWTSIIAGLRLN 477
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
R EAL FR+M++ + N++T++ L+ CA AL G+EIH HV+R + + +
Sbjct: 478 NRCFEALIFFRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP 536
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
N LL+MY++CG + F +KKD+ +WN +++GY G G + F+ M++A +
Sbjct: 537 NALLDMYVRCGRMNIAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVR 595
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
PD + F+++L C + +V +G F M E+ + P ++HYAC+VDLLGRAG LQEA
Sbjct: 596 PDEITFISLLCGCGKSQMVRQGLMYFSKM-EEYGVTPNLKHYACVVDLLGRAGELQEAHK 654
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
++ MP+ P+ VWG LLN+CR+H N D+ E A +IF L + G Y+LL N+YA G+
Sbjct: 655 FIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGK 714
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
W + AKVR K GL AG SW+EVK K+H F S + K + VL+ +M
Sbjct: 715 WREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMSE 774
Query: 691 KG 692
G
Sbjct: 775 VG 776
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 229/487 (47%), Gaps = 81/487 (16%)
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+NG E A+KL M++L V D F ++R C++ + G V++ L
Sbjct: 71 ANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEW----KRAHEEGSKVYSVALSSMNS 126
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+V + N + M+ + G + D++ +F K+ +N SWN++ G+A D A+ L+ RM
Sbjct: 127 LSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRM 186
Query: 229 -ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
+ G++P+ T+ +L + CG GI DLA
Sbjct: 187 LWVGGVKPDVYTFPCVLRT---CG---------------GI--------------PDLAR 214
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
G+ +H V++ G+E + V NALI +Y K GDVK A+ LF + ++I+SWNA+I+
Sbjct: 215 ---GREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISG 271
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
Y E G+ E +++F FA G
Sbjct: 272 YFENGMGHEGLKLF-------------------------FAMRG--------------LS 292
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
V + +T++ ++S C +GR+IH +V+ +I V N L MY+ G E
Sbjct: 293 VDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAE 352
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
+F +++ KD+++W +MISGY N L E A+ T+ M + KPD + AVLSAC+ G
Sbjct: 353 KLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLG 412
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
++ G + + ++ R+ + ++++ + + +A DI N+P + N W ++
Sbjct: 413 DLDTGVELHKLAIKA-RLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK-NVISWTSI 470
Query: 588 LNSCRMH 594
+ R++
Sbjct: 471 IAGLRLN 477
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 137/291 (47%), Gaps = 40/291 (13%)
Query: 247 HARC--GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
H C G+LEE M L + M++ + V + ++ +C A G ++ +
Sbjct: 67 HGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNS 126
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
V + NA + ++ + G++ A +F ++ E+N+ SWN L+ YA+ G DEA+ ++ ++
Sbjct: 127 LSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRM 186
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
+ G +P+V ++ V L C
Sbjct: 187 LWVGG---VKPDVYTFPCV-----------------------------------LRTCGG 208
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
L GRE+H HVVR +I V N L+ MY+KCG ++ L+F+++ ++D+I+WN+M
Sbjct: 209 IPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAM 268
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
ISGY NG+G L F M PD + +V+SAC G GR I
Sbjct: 269 ISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDI 319
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 193/655 (29%), Positives = 332/655 (50%), Gaps = 81/655 (12%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
Q+ + + +G + F A+ +L +YA+ GRL DAR VF+ P +++ WN+++
Sbjct: 116 QLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPV---RNTVSWNALIAGYA 172
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+ A++L+++M+++ ++ D TF ++ + +S Q +H + + G
Sbjct: 173 ESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPS----WYSLMQQLHGKIAKYGSA 228
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+ ++N I Y++ G +DS ++FD ++ ++ ISWN
Sbjct: 229 LGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWN---------------------- 266
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAA 287
S+L ++A G +E M F MMR+ G++ + V+SVC++
Sbjct: 267 -------------SMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGC 313
Query: 288 D-HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
D G+ IH V+K G E V NA+I +Y T
Sbjct: 314 DDRQGRSIHSLVVKIGLEGVTHVCNAMIAMY----------------------------T 345
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
+ E + ++A + F L D +SW++++ ++ +G +AL FR M+
Sbjct: 346 RFTENCMMEDAYKCFDSLVFKDA--------VSWNSMLTGYSHHGLSSDALRFFRFMRAE 397
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
V + +S L C++ A L +GR++H V++ + N V + L+ MY KCG + +
Sbjct: 398 NVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDA 457
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
FE+ +K + WNSM+ GY +G + F EM++ D V FVA+L+A SH
Sbjct: 458 RKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHG 517
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
GLV+EG I + M ++I +MEHYAC VDL GRAG L +A +++++MP +P+A VW T
Sbjct: 518 GLVDEGSEILNSMETRYKIPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMT 577
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
LL +CR+H N ++A +AS +F +Y+LLS++Y+ G W D A V+ K +GL
Sbjct: 578 LLGACRIHGNMELASDVASHLFVAEPRQHSTYVLLSSMYSGRGMWSDRATVQKVMKNRGL 637
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
KV G SWIEVK ++H F++ + + + ++L L LQ+ + C ++ IL
Sbjct: 638 SKVPGWSWIEVKNEVHSFNADDRSHPRMDEIFDMLRML-LQVAQRFCSSGDEEIL 691
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 160/339 (47%), Gaps = 42/339 (12%)
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
WN + + ++ + G L +R+ E P+ V+W SLL++H G + L M
Sbjct: 29 WNQLLTAYSASGPGSG-LAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMH 87
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
RG+ A+ L A +G + F +K G D VF +AL+ V
Sbjct: 88 ARGLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDV-------- 139
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
YA+ G +A VF DG M N +SW+A+I
Sbjct: 140 -----------------------YAKCGRLSDARRVF------DG--MPVRNTVSWNALI 168
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
+A + + +A++LF +MQ ++V + T + LL+ + ++ +++HG + +
Sbjct: 169 AGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSA 228
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
++V N + Y +CG + +F+ I+ +DLI+WNSM+ Y +G+ + A+ F M
Sbjct: 229 LGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRM 288
Query: 505 I-EAGFKPDGVAFVAVLSACSHAGLVN-EGRRIFDMMVR 541
+ E+G +PD +F +V+S CS G + +GR I ++V+
Sbjct: 289 MRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVK 327
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 110/224 (49%), Gaps = 10/224 (4%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGR---LFDARNVFETAPFDCKSSSLLWNS 102
Q + +H+ ++ G + ++++Y RF + DA F++ F ++ WNS
Sbjct: 317 QGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMMEDAYKCFDSLVF---KDAVSWNS 373
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
+L +GL +AL+ + MR V D F +R+C + R G+ VH+ V
Sbjct: 374 MLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRL----GRQVHSLV 429
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
+Q GF N + + LI MY+K G + D+ K F++ + + WN M G+A +
Sbjct: 430 IQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVT 489
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
+LF M + + VT+ +LL++++ G ++E ++ + M R
Sbjct: 490 DLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETR 533
>gi|224080081|ref|XP_002306009.1| predicted protein [Populus trichocarpa]
gi|222848973|gb|EEE86520.1| predicted protein [Populus trichocarpa]
Length = 870
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 203/656 (30%), Positives = 336/656 (51%), Gaps = 64/656 (9%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
K IH HN+L+ A F+ ++S Y R GR+ +A +F + WN
Sbjct: 255 KEIHGYVLRHNELL-----ADVFVWNALVSFYLRVGRVEEAELLFRRMEL---RDLVSWN 306
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVL-GDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
+I+ SNG + AL+L+ ++ L ++ D T +I AC + G+++H
Sbjct: 307 AIIAGYASNGEWSKALELFHELLTLDMIEPDSVTLLCIIPAC----AQSRNLHVGKMIHG 362
Query: 161 HVLQMGFQ-GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+VL+ + + N L+ YAK + +++ F + ++ ISWN M +
Sbjct: 363 YVLRHPLLCEDTSVGNALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYNT 422
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
LEL + M EG P+ VT I V+
Sbjct: 423 WFLELLRWMLSEGTTPDSVT-----------------------------------ILSVV 447
Query: 280 SVCADLAADHMGKVIHGFVIK-----GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
C ++ + K H + I+ F+ + NA++ Y K G+++ A +F +
Sbjct: 448 HFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIGNAILDAYAKCGNIEYASKVFQSLS 507
Query: 335 E-KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
E +N+V++ A+I+ Y GL DEA F++ M ++ W+ ++ +A N
Sbjct: 508 ENRNLVTFKAIISGYINCGLLDEAYITFNR--------MPSSDLSVWNLMVRLYAENDCS 559
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
+AL LF ++Q + ++VTI LL CAE A++ + ++ HG+ +R S ++ + L
Sbjct: 560 SQALGLFHELQAHGIKPDAVTIMSLLPACAEMASVQLIKQCHGYAIR-SCFGDLHLDGAL 618
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++Y KCG + +F+ I KDLI + +MI GY M+G+G+ AL TF MIE G KPD
Sbjct: 619 QDVYAKCGSIGYAFKLFQLIPNKDLIIFTAMIRGYAMHGMGKEALGTFFHMIELGIKPDH 678
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
V VLSACSHAGLV+EG IF + + ++ ME Y+C+VDLL R G + +A +V
Sbjct: 679 VIITTVLSACSHAGLVDEGLNIFYSIEKVHGMKLTMEQYSCVVDLLARGGRIDDAFSMVT 738
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
MP+E NA +WGTLL +CR H ++ +A ++F + E G+Y++LSN+YAA RW+
Sbjct: 739 GMPIEANANIWGTLLGACRTHHEVELGRFVADRLFKIEAENIGNYVVLSNLYAADARWDG 798
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
++R +T+ LKK AG SWIEV+R+ ++F +G++ ++ +L L Q++
Sbjct: 799 VMEIRKLMRTRDLKKPAGCSWIEVERRKNVFVAGDTSHPHRIDIYRILSTLNGQIK 854
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 199/417 (47%), Gaps = 91/417 (21%)
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
++++C + + ++ G+ +H ++++G + L+ MYAK G + +S KLF ++
Sbjct: 30 ILKSCAGLSAIKW----GRALHGSIVRIGHVSCHAVSKALLNMYAKCGALDESKKLFGEI 85
Query: 198 ---RVKNYISWNMMFSGFALN--FDCDGALELFKRMELEGL-EPNFVTWTSLLSSHARCG 251
++ I WN++ SG+A + +D + L LF+ M +P+ VT
Sbjct: 86 GSCNDRDPIFWNILLSGYAGSRVYDAE-TLRLFREMHGANYPKPSSVT------------ 132
Query: 252 RLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN 311
A+VL VCA L +MG+ ++ + IK G + + N
Sbjct: 133 -----------------------AAIVLPVCARLGDVYMGRSVNCYAIKSGLDTHTLAGN 169
Query: 312 ALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL-CDEAVEVFSQLEKLDGG 370
AL+ + YA+ GL C +A F +++ D
Sbjct: 170 ALV-------------------------------SMYAKCGLVCQDAYAAFDSIDEKD-- 196
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCA---ESAA 427
V+SW+A+I FA N E+A LF M ++ N T++ +L VCA E A
Sbjct: 197 ------VVSWNAIISGFAENNLMEDAFRLFSSMLKGQIKPNYTTLANILPVCASFDEYIA 250
Query: 428 LNIGREIHGHVVRVS-MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
G+EIHG+V+R + + ++ V N L++ Y++ G +EE L+F ++E +DL++WN++I+
Sbjct: 251 YWFGKEIHGYVLRHNELLADVFVWNALVSFYLRVGRVEEAELLFRRMELRDLVSWNAIIA 310
Query: 487 GYGMNGLGENALATFEEMIEAG-FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
GY NG AL F E++ +PD V + ++ AC+ + ++ G+ I ++R
Sbjct: 311 GYASNGEWSKALELFHELLTLDMIEPDSVTLLCIIPACAQSRNLHVGKMIHGYVLRH 367
Score = 153 bits (386), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 136/562 (24%), Positives = 247/562 (43%), Gaps = 98/562 (17%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L+ C + +K +H ++ G + ++ +L++YA+ G L +++ +F
Sbjct: 30 ILKSCAGLSAIKWGRALHGSIVRIGHVSCHAVSKALLNMYAKCGALDESKKLFGEIGSCN 89
Query: 94 KSSSLLWNSILRVNVSNGLYE-NALKLYVKMRKLGVL-GDGFTFPLVIRACKFMGSFRFR 151
+ WN +L + +Y+ L+L+ +M T +V+ C +G
Sbjct: 90 DRDPIFWNILLSGYAGSRVYDAETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYM- 148
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM-SDSFKLFDKVRVKNYISWNMMFS 210
G+ V+ + ++ G + N L+ MYAK G + D++ FD +
Sbjct: 149 ---GRSVNCYAIKSGLDTHTLAGNALVSMYAKCGLVCQDAYAAFDSID------------ 193
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
E + V+W +++S A +E+ LF M K I+
Sbjct: 194 -----------------------EKDVVSWNAIISGFAENNLMEDAFRLFSSMLKGQIKP 230
Query: 271 GAEAIAVVLSVCA---DLAADHMGKVIHGFVIKGG--FEDYVFVKNALICVYGKHGDVKV 325
+A +L VCA + A GK IHG+V++ D VFV NAL+ Y + G V+
Sbjct: 231 NYTTLANILPVCASFDEYIAYWFGKEIHGYVLRHNELLAD-VFVWNALVSFYLRVGRVEE 289
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A+ LF +E +++VSWNA+I YA G +A+E+F +L LD M P
Sbjct: 290 AELLFRRMELRDLVSWNAIIAGYASNGEWSKALELFHELLTLD---MIEP---------- 336
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS-MN 444
+SVT+ ++ CA+S L++G+ IHG+V+R +
Sbjct: 337 -------------------------DSVTLLCIIPACAQSRNLHVGKMIHGYVLRHPLLC 371
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
++ V N L++ Y KC +E + F I ++DLI+WNSM+ +G L M
Sbjct: 372 EDTSVGNALVSFYAKCDDIEGAYETFFMISRRDLISWNSMLDALVESGYNTWFLELLRWM 431
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR------EFRIEPQMEHYACMVDL 558
+ G PD V ++V+ C + ++ + +R +F +EP + + ++D
Sbjct: 432 LSEGTTPDSVTILSVVHFCVNVLKEDKVKEAHSYSIRHRLLASKFDVEPTIGN--AILDA 489
Query: 559 LGRAGLLQEASDIVKNMPMEPN 580
+ G ++ AS + +++ N
Sbjct: 490 YAKCGNIEYASKVFQSLSENRN 511
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 150/316 (47%), Gaps = 52/316 (16%)
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+A+A +L CA L+A G+ +HG +++ G V AL+ +Y K G + ++ LF E
Sbjct: 25 QAVASILKSCAGLSAIKWGRALHGSIVRIGHVSCHAVSKALLNMYAKCGALDESKKLFGE 84
Query: 333 I---EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
I +++ + WN L++ YA + + D
Sbjct: 85 IGSCNDRDPIFWNILLSGYAGSRVYD---------------------------------- 110
Query: 390 NGRGEEALDLFRKMQLAKVV-ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
E L LFR+M A +SVT + +L VCA + +GR ++ + ++ ++ + L
Sbjct: 111 ----AETLRLFREMHGANYPKPSSVTAAIVLPVCARLGDVYMGRSVNCYAIKSGLDTHTL 166
Query: 449 VQNGLLNMYMKCGCL-EEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
N L++MY KCG + ++ + F+ I++KD+++WN++ISG+ N L E+A F M++
Sbjct: 167 AGNALVSMYAKCGLVCQDAYAAFDSIDEKDVVSWNAIISGFAENNLMEDAFRLFSSMLKG 226
Query: 508 GFKPDGVAFVAVLSACSHAGLVNE------GRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
KP+ +L C+ +E G+ I ++R + + + +V R
Sbjct: 227 QIKPNYTTLANILPVCAS---FDEYIAYWFGKEIHGYVLRHNELLADVFVWNALVSFYLR 283
Query: 562 AGLLQEASDIVKNMPM 577
G ++EA + + M +
Sbjct: 284 VGRVEEAELLFRRMEL 299
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 175/391 (44%), Gaps = 43/391 (10%)
Query: 1 MRHSLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGAN 60
+RH LL P T N++LD + +C I +V Q + N
Sbjct: 467 IRHRLLASKFDVEP----------TIGNAILDAY----AKCGNIEYASKVF-QSLSENRN 511
Query: 61 ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSL-LWNSILRVNVSNGLYENALKL 119
F A ++S Y G L +A F P SS L +WN ++R+ N AL L
Sbjct: 512 LVTFKA--IISGYINCGLLDEAYITFNRMP----SSDLSVWNLMVRLYAENDCSSQALGL 565
Query: 120 YVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIG 179
+ +++ G+ D T ++ AC M S + + H + ++ F G++H+ L
Sbjct: 566 FHELQAHGIKPDAVTIMSLLPACAEMASVQLI----KQCHGYAIRSCF-GDLHLDGALQD 620
Query: 180 MYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT 239
+YAK G + +FKLF + K+ I + M G+A++ AL F M G++P+ V
Sbjct: 621 VYAKCGSIGYAFKLFQLIPNKDLIIFTAMIRGYAMHGMGKEALGTFFHMIELGIKPDHVI 680
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
T++LS+ + G ++E +++F + K G+++ E + V+ + A G++ F
Sbjct: 681 ITTVLSACSHAGLVDEGLNIFYSIEKVHGMKLTMEQYSCVVDLLA-----RGGRIDDAFS 735
Query: 299 IKGG--FEDYVFVKNALICVYGKHGDVK----VAQNLFSEIEEKNIVSWNALITSYAEAG 352
+ G E + L+ H +V+ VA LF +IE +NI ++ L YA
Sbjct: 736 MVTGMPIEANANIWGTLLGACRTHHEVELGRFVADRLF-KIEAENIGNYVVLSNLYAADA 794
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
D +E+ + D +++P SW V
Sbjct: 795 RWDGVMEIRKLMRTRD---LKKPAGCSWIEV 822
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 185/587 (31%), Positives = 310/587 (52%), Gaps = 21/587 (3%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S Y R G++ +AR +F+ P + + +++ V NG + AL+++ MR GV
Sbjct: 125 MVSGYVRNGQIDNARKLFDVMP---NKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGV 181
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
+ + T VI AC +G ++VH V++M G V + L+ Y +
Sbjct: 182 VPNDLTLVNVISACSHLGEVLN----CRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVR 237
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
++ +LFD++ +N ++WN+M +G+A D A ELF + + + ++W +++ +
Sbjct: 238 EARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGI----CDKDVISWGTMIDGYI 293
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+ GRL E ++++ M + G I ++S C A G +HG V+K GF+ Y F
Sbjct: 294 QKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNF 353
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
++ +I Y G + +A F + ++ SWNAL + + G+ D A++ F ++ D
Sbjct: 354 IQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRD 413
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
V SWS +I +A + + AL+LF KM + N VT+ + S A L
Sbjct: 414 --------VFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTL 465
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI--EKKDLITWNSMIS 486
G+ H ++ S+ N ++ L++MY KCG + F QI E + WN++I
Sbjct: 466 QEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIIC 525
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
G +G L F +M KP+ + F+ VLSAC HAGLV G+RIF M + +E
Sbjct: 526 GLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVE 585
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
P ++HY CM+D+LGRAGLL+EA +++++MPME + +WGTLL +CR H N ++ E A
Sbjct: 586 PDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACRTHGNVNIGERAAEN 645
Query: 607 IFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
+ L G +LLSNIYA +G+WE+ + VR + + + + G S
Sbjct: 646 LARLAPSHGGGKVLLSNIYANAGKWEEVSFVRSVMQGQTMDREPGYS 692
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 220/462 (47%), Gaps = 45/462 (9%)
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
++ A K S F S G+ +H+ + ++G N I N LI MYAK G + ++ LFD
Sbjct: 56 LVSALKSCSSLSF-ISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGF 114
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
+ +S N+M SG+ N D A +LF M +G V++T+++ + G E +
Sbjct: 115 ATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGC----VSYTTMIMGFVQNGFFREAL 170
Query: 258 DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
++F MR G+ + V+S C+ L +++HG V+K V V L+ Y
Sbjct: 171 EVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAY 230
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
V+ A+ LF E+ E+N+V+WN ++ YA+ GL DEA E+F + D V
Sbjct: 231 CLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKD--------V 282
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
ISW +I + GR EAL+++R M N V I L+S C A+ G ++HG
Sbjct: 283 ISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGT 342
Query: 438 VVRVSMNKNILVQNGLLNMYMKCG-----CLE-----EGHL------------------- 468
VV+ + +Q ++ Y CG CL+ + HL
Sbjct: 343 VVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHA 402
Query: 469 --VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
F+++ +D+ +W++MISGY + + AL F +M+ G KP+ V V+V SA +
Sbjct: 403 LKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATL 462
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
G + EG+ + M R I A ++D+ + G + A
Sbjct: 463 GTLQEGKLAHEYM-RSESIPFNDNLRAALIDMYAKCGSINSA 503
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 141/299 (47%), Gaps = 39/299 (13%)
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
A+ L C+ L+ G+ IH + K G F++N+LI +Y K GD+K AQ LF
Sbjct: 55 ALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGF 114
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
+ VS N +++ Y G D A ++F M +S++ +I F NG
Sbjct: 115 ATLDSVSCNIMVSGYVRNGQIDNARKLFD--------VMPNKGCVSYTTMIMGFVQNGFF 166
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR--------VSMN- 444
EAL++F+ M+ VV N +T+ ++S C+ + R +HG VV+ VS N
Sbjct: 167 REALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNL 226
Query: 445 ----------------------KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
+N++ N +LN Y K G ++E +F+ I KD+I+W
Sbjct: 227 MHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWG 286
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
+MI GY G AL + M++ G P+ V V ++SAC + +G ++ +V+
Sbjct: 287 TMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVK 345
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 46/255 (18%)
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
L C+ + ++ GR+IH + ++ ++ N +QN L+NMY KCG ++ L+F+ D
Sbjct: 60 LKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDS 119
Query: 479 ITWNSMISGYGMNGLGEN-------------------------------ALATFEEMIEA 507
++ N M+SGY NG +N AL F++M
Sbjct: 120 VSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSC 179
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR-----IEPQMEHYACMVDLLGRA 562
G P+ + V V+SACSH G V R + ++V+ F + + H C+
Sbjct: 180 GVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCS----- 234
Query: 563 GLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLS 622
++EA + MP E N W +LN + T + + G+ + S+ +
Sbjct: 235 -GVREARRLFDEMP-ERNLVTWNVMLNG---YAKTGLVDEARELFDGICDKDVISWGTMI 289
Query: 623 NIYAASGRWEDAAKV 637
+ Y GR +A ++
Sbjct: 290 DGYIQKGRLREALEI 304
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 184/594 (30%), Positives = 303/594 (51%), Gaps = 87/594 (14%)
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
GLY AL L +++ ++ D + +++ C +G + G+IVH H++ F
Sbjct: 70 TGLY--ALDL---IQRGSLVPDYNLYSKLLKECTRLG----KVEQGRIVHAHLVDSHFLD 120
Query: 170 NVHIV--NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
N H+V N ++ MYAK G + D+ ++FD++ K+
Sbjct: 121 N-HLVLQNIIVNMYAKCGCLDDARRMFDEMPTKD-------------------------- 153
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
VTWT+L++ ++ R + + LF M + G++ ++ +L
Sbjct: 154 ---------MVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHG 204
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
G +H F +K G++ V+V +AL+ +Y + G + AQ F
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAF----------------- 247
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
DG M + +SW+A+I A G GE AL L KMQ
Sbjct: 248 --------------------DG--MPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKN 285
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
T S + S CA AL G+ +H H+++ + + N LL+MY K G +++
Sbjct: 286 FQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAK 345
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
VF+++ K D+++WN+M++G +GLG+ L FE+M+ G +P+ ++F+ VL+ACSH+G
Sbjct: 346 RVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSG 405
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
L++EG F++M +++++EP + HY VDLLGR GLL A ++ MP+EP A VWG L
Sbjct: 406 LLDEGLYYFELM-KKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGAL 464
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
L +CRMHKN ++ A + F L +G MLLSNIYA++GRW D AKVR K G+K
Sbjct: 465 LGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVK 524
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
K SW+E++ +H+F + + +K + EE++ +++ G VPD +L
Sbjct: 525 KQPACSWVEIENAVHLFVANDETHPQIKEIRGKWEEISGKIKEIGYVPDTSHVL 578
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 191/393 (48%), Gaps = 53/393 (13%)
Query: 34 FDHLLQQCKTIHQLKQ---VHNQLIVTG-ANASAFLAARVLSIYARFGRLFDARNVFETA 89
+ LL++C + +++Q VH L+ + + L ++++YA+ G L DAR +F+
Sbjct: 90 YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
P + W +++ N +AL L+ +M +LG+ + FT +++A GS
Sbjct: 150 P---TKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKAS---GS-E 202
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G +H L+ G+Q +V++ + L+ MYA+ G M + FD + K+ +SWN +
Sbjct: 203 HGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALI 262
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
SG A + + AL L +M+ + +P T++S+ S+ A G LE+
Sbjct: 263 SGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQ-------------- 308
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
GK +H +IK G + F+ N L+ +Y K G + A+ +
Sbjct: 309 ---------------------GKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRV 347
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
F + + ++VSWN ++T A+ GL E ++ F Q+ ++ +E PN IS+ V+ A +
Sbjct: 348 FDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRI---GIE-PNEISFLCVLTACSH 403
Query: 390 NGRGEEALDLFRKMQLAKV---VANSVTISGLL 419
+G +E L F M+ KV V + VT LL
Sbjct: 404 SGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLL 436
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 104/203 (51%), Gaps = 6/203 (2%)
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS-MNKN 446
+ G G ALDL +Q +V + S LL C + GR +H H+V ++ +
Sbjct: 66 SDGGTGLYALDL---IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNH 122
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
+++QN ++NMY KCGCL++ +F+++ KD++TW ++I+G+ N +AL F +M+
Sbjct: 123 LVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
G +P+ ++L A ++ G ++ ++ + + + + +VD+ R G +
Sbjct: 183 LGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLK-YGYQSSVYVGSALVDMYARCGHMD 241
Query: 567 EASDIVKNMPMEPNAYVWGTLLN 589
A MP + + W L++
Sbjct: 242 AAQLAFDGMPTK-SEVSWNALIS 263
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/547 (33%), Positives = 292/547 (53%), Gaps = 55/547 (10%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H ++ GF ++ +L+ Y G + ++ K+F+++ + WN M G + +
Sbjct: 53 IHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSET 112
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
+EL+ RM EPN T++ L+ AR L E
Sbjct: 113 PHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLRE---------------------- 150
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY---GKHGDVKVAQNLFSEIE 334
G+ +HG V+ G+ VFV+ +L+ +Y G + V+ A+ +F EI
Sbjct: 151 -------------GEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIV 197
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
++NIVSWN+L+ Y G D A +F + M NV+SW+ +I A GR +
Sbjct: 198 DRNIVSWNSLLAGYVRCGDVDGARRIFDE--------MPERNVVSWTTMIAGCAQIGRCK 249
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV--SMNKNILVQ-- 450
+AL LF +M+ A V + V + LS CAE L +G IH ++ + N+ +LV
Sbjct: 250 QALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLN 309
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF- 509
N L++MY CG +++ + VF ++++ I+W SMI+G+ G E AL F+ M G
Sbjct: 310 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTD 369
Query: 510 --KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
+PDG+ F+ VL ACSHAG V++GR F+ M +++ I P++EHY CMVDLL RAG L E
Sbjct: 370 EGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDE 429
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ-IFGLITETTGSYM-LLSNIY 625
A + ++MPM+PN VWG LL CR+HKN ++A +A + + L + Y+ LLSN+Y
Sbjct: 430 AHRLXESMPMKPNDAVWGALLGGCRIHKNAELASHVAQKLVLELKPDQAAGYLVLLSNVY 489
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A + RW+D A VR G++K AG+SW+++ +H F +G+ +V E+L ++
Sbjct: 490 ATAKRWQDVALVRQKMVEIGVRKPAGRSWVQINGVVHDFVAGDWTHKHASSVYEMLSKIT 549
Query: 686 LQMENKG 692
Q + +G
Sbjct: 550 RQAKLEG 556
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 193/370 (52%), Gaps = 19/370 (5%)
Query: 41 CKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLW 100
C TI +LKQ+H Q+IV G + FL ++LS Y G L +A VFE S+ +W
Sbjct: 44 CDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIE---NPSTTVW 100
Query: 101 NSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
N ++R + + ++LY +M + + FT+ +I C R G+ VH
Sbjct: 101 NQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLRE----GEQVHG 156
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQ---MSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
V+ G+ NV + L+ +YA G + + ++FD++ +N +SWN + +G+ D
Sbjct: 157 RVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGD 216
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
DGA +F M E N V+WT++++ A+ GR ++ + LF MR+ G+++ A+
Sbjct: 217 VDGARRIFDEMP----ERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVA 272
Query: 278 VLSVCADLAADHMGKVIHGFVIK----GGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
LS CA+L +G IH ++ + G V + N+LI +Y G + A +F +
Sbjct: 273 ALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGM 332
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
++++ +SW ++IT +A+ G +EA+ VF +++L G RP+ I++ V+ A + G
Sbjct: 333 QQRSTISWTSMITGFAKQGHAEEALGVFQWMQRL-GTDEGRPDGITFIGVLCACSHAGFV 391
Query: 394 EEALDLFRKM 403
++ F M
Sbjct: 392 DQGRHFFECM 401
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 53/109 (48%)
Query: 432 REIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
++IH ++ ++ + LL+ Y+ G L H VFE+IE WN MI G+ +
Sbjct: 51 KQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQS 110
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
+ + M+EA +P+ + ++ C+ + L+ EG ++ +V
Sbjct: 111 ETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVHGRVV 159
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/618 (30%), Positives = 317/618 (51%), Gaps = 84/618 (13%)
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ +LL + R+ L A+K ++ G+ D T+ +I+ C +
Sbjct: 21 YSSTDQTLLLSEFTRLCYQRDL-PRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHE 79
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G ++ H+ G + + +VN LI MY K ++D+ +LFD++ +N IS
Sbjct: 80 ----GNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVIS------ 129
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
WT+++S++++C ++ ++L +M + +
Sbjct: 130 -----------------------------WTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+ VL C ++ M +H +IK G E VFV++ALI V+ K G+
Sbjct: 161 NVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEP------- 210
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
++A+ VF ++ D I W+++IG FA N
Sbjct: 211 ------------------------EDALSVFDEMVTGDA--------IVWNSIIGGFAQN 238
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
R + AL+LF++M+ A +A T++ +L C A L +G + H H+V+ ++++++
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--DQDLILN 296
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
N L++MY KCG LE+ VF Q++++D+ITW++MISG NG + AL FE M +G K
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
P+ + V VL ACSHAGL+ +G F M + + I+P EHY CM+DLLG+AG L +A
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVK 416
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
++ M EP+A W TLL +CR+ +N +AE A ++ L E G+Y LLSNIYA S +
Sbjct: 417 LLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQK 476
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
W+ ++R + +G+KK G SWIEV ++IH F G++ + V + L +L ++
Sbjct: 477 WDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTG 536
Query: 691 KGCVPDNDIILWEMMGKK 708
G VP+ + +L ++ G++
Sbjct: 537 IGYVPETNFVLQDLEGEQ 554
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 180/374 (48%), Gaps = 54/374 (14%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ L++ C + +H+ + L G FL ++++Y +F L DA +F+ P
Sbjct: 64 YSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMP 123
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + W +++ +++ AL+L V M + V + +T+ V+R+C M R
Sbjct: 124 ---QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR- 179
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
++H +++ G + +V + + LI ++AK+G+ D+ +FD++ + I WN +
Sbjct: 180 ------MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIG 233
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
GFA N D ALELFKRM+ G T TS
Sbjct: 234 GFAQNSRSDVALELFKRMKRAGFIAEQATLTS---------------------------- 265
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
VL C LA +G H ++K ++ + + NAL+ +Y K G ++ A +F
Sbjct: 266 -------VLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVF 316
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
++++E+++++W+ +I+ A+ G EA+++F +++ S +PN I+ V+ A +
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMK----SSGTKPNYITIVGVLFACSHA 372
Query: 391 GRGEEALDLFRKMQ 404
G E+ FR M+
Sbjct: 373 GLLEDGWYYFRSMK 386
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 152/323 (47%), Gaps = 64/323 (19%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+ +L+ C + ++ +H +I G + F+ + ++ ++A+ G DA +VF+
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM---V 221
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+++WNSI+ N + AL+L+ +M++ G + + T V+RAC +
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA------- 274
Query: 154 FGQIVHNHVLQMGFQGNVHIV---------NELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
+L++G Q +VHIV N L+ MY K G + D+ ++F++++ ++ I+
Sbjct: 275 --------LLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVIT 326
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
W+ M SG A N AL+LF+RM+ G +PN++T +L + + G LE+ F M+
Sbjct: 327 WSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 386
Query: 265 K-RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
K GI D +H G +I + GK G +
Sbjct: 387 KLYGI---------------DPVREHYG--------------------CMIDLLGKAGKL 411
Query: 324 KVAQNLFSEIE-EKNIVSWNALI 345
A L +E+E E + V+W L+
Sbjct: 412 DDAVKLLNEMECEPDAVTWRTLL 434
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/640 (27%), Positives = 316/640 (49%), Gaps = 81/640 (12%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H + G S F+ + +L +Y + G + + VF+ P +++ W +++ V
Sbjct: 138 LHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMP---TRNAVTWTAVITGLVR 194
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
G E L + M + V D + + + ++A G+ + G+ +H L+ GF
Sbjct: 195 AGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGAL----NHGRSIHTQTLKKGFDE 250
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
N + N L MY K G++ F K+R + +S
Sbjct: 251 NSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVS------------------------- 285
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
WT++++++ + G+ + + F MR + + V+S CA+ A
Sbjct: 286 ----------WTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLK 335
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
G+ +H V+ GF + + V N+++ +Y K G++ +F
Sbjct: 336 WGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFC------------------ 377
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
SM+ ++I+WS +I A++ G GEEA + +M+
Sbjct: 378 ---------------------SMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPK 416
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
N ++ +LSVC A L G+++H HV+ V + + +V + L+ MY KCG + E +
Sbjct: 417 PNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKI 476
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F K D+I+W +MISGY +G + A+ FE + + G +PD V F+ VL+ACSHAG+V
Sbjct: 477 FMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMV 536
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ G F+ M +++ I P EHY CM+DLL RAG L +A ++++MP++ + VW TLL
Sbjct: 537 DLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLR 596
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
+CR+H + D + A+++ L G+++ L+NI+AA G+W++AA +R+ K+KG+ K
Sbjct: 597 ACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKE 656
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
G S ++VK + F SG+ +++ +LEELA ME
Sbjct: 657 PGWSSVKVKDSVFAFVSGDRSHPQGEDIYNILEELASGME 696
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/503 (24%), Positives = 218/503 (43%), Gaps = 83/503 (16%)
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL 129
L I + L DAR++F+ P + + W +I+ V++ AL+L+ KMR L
Sbjct: 56 LKILVKTNHLKDARDLFDQLP---QRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112
Query: 130 G-DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D F L ++ C + +G +H ++ G +V + + L+ MY K+G++
Sbjct: 113 RIDPFLLSLGLKTC----GLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIG 168
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
S K+FD++ +N ++W + +G
Sbjct: 169 RSCKVFDEMPTRNAVTWTAVITGL-----------------------------------V 193
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
R G E + F M + +E + A A+ L AD A + G+ IH +K GF++ F
Sbjct: 194 RAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSF 253
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V N+L +Y K G + + F ++ ++VSW ++T+Y + G D ++ F ++
Sbjct: 254 VANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMR--- 310
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
ASN V+ N T S ++S CA A L
Sbjct: 311 -------------------ASN-----------------VIPNEYTFSAVISCCANFARL 334
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
G ++H HV+ V + V N ++ +Y KCG L VF ++ +D+ITW+++I+ Y
Sbjct: 335 KWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAY 394
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
G GE A M G KP+ A +VLS C ++ +G+++ V +E
Sbjct: 395 SQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLH-AHVLSVGLEQT 453
Query: 549 MEHYACMVDLLGRAGLLQEASDI 571
+ ++ + + G + EAS I
Sbjct: 454 SMVCSALIIMYAKCGSIAEASKI 476
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 167/357 (46%), Gaps = 48/357 (13%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFDCKSSSLLWNSILRV 106
+ +H Q + G + ++F+A + ++Y + G+L + F + D S W +I+
Sbjct: 237 RSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVS----WTTIVTA 292
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
+ G + L+ + +MR V+ + +TF VI C R +G+ +H HVL +G
Sbjct: 293 YIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFA----RLKWGEQLHAHVLCVG 348
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F + + N ++ +Y+K G+++ K+F ++ ++ I+W+ + + ++ + A E
Sbjct: 349 FVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLS 408
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
RM EG +PN A+A VLSVC +A
Sbjct: 409 RMRSEGPKPNEF-----------------------------------ALASVLSVCGSMA 433
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
GK +H V+ G E V +ALI +Y K G + A +F + + +I+SW A+I+
Sbjct: 434 ILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMIS 493
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
YAE G EA+E+F ++K+ RP+ +++ V+ A + G + F M
Sbjct: 494 GYAEHGHSQEAIELFENIQKVG----LRPDSVTFIGVLTACSHAGMVDLGFYYFNSM 546
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 10/235 (4%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++ C +LK Q+H ++ G + +A ++++Y++ G L VF +
Sbjct: 321 FSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMK 380
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
F + W++I+ G E A + +MR G + F V+ C M
Sbjct: 381 F---RDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQ 437
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H HVL +G + + + LI MYAK G ++++ K+F + ISW M S
Sbjct: 438 ----GKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMIS 493
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
G+A + A+ELF+ ++ GL P+ VT+ +L++ + G ++ F+ M K
Sbjct: 494 GYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSK 548
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 205/666 (30%), Positives = 330/666 (49%), Gaps = 92/666 (13%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA--RFGRLFDARNVFETAPFDCKS 95
LQ C T + Q+H I T + +++R+L++YA R L A ++F+ +
Sbjct: 22 LQNCGTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQ---EP 78
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ + WN +++ + N +A+ L+ K+ + D FT P V++ C +G+ + G
Sbjct: 79 TLVSWNLLIKCYIENQRSNDAIALFCKLL-CDFVPDSFTLPCVLKGCARLGALQE----G 133
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ +H VL++GF + +++ L+ MY+K G++ K+FD++ K+ +SWN + G+A
Sbjct: 134 KQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARC 193
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
+ + ALE+F+ M E + +WT L+ ++ G+LE D+FD M R
Sbjct: 194 GEIELALEMFEEMP----EKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRN-------- 241
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
SV NA+I Y K GD A+ LF ++ E
Sbjct: 242 ----SVSW---------------------------NAMINGYMKAGDSNTAKELFDQMPE 270
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
+++V+WN++IT Y ER N + +
Sbjct: 271 RSLVTWNSMITGY------------------------ER---------------NKQFTK 291
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
AL LF M + N TI G +S + +L GR +H ++V+ + ++ L+
Sbjct: 292 ALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIE 351
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY KCG ++ VF I KK L W S+I G GM+GL E L F+EM G KP +
Sbjct: 352 MYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAIT 411
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
F+ VL+ACSHAG + R F MM ++ I+P +EHY C++D+L RAG L+EA D ++ M
Sbjct: 412 FIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERM 471
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
P++ N +W +LL+ R H N + E A + L +TTG Y++LSN+YAA+G WE
Sbjct: 472 PIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVR 531
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
+VR K KG+KK G S IE + IH F G+ + + L E+ ++ G +P
Sbjct: 532 QVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIP 591
Query: 696 DNDIIL 701
D +L
Sbjct: 592 DTTQVL 597
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 185/571 (32%), Positives = 298/571 (52%), Gaps = 79/571 (13%)
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDS 190
D + +++ C +G + G++VH HVL F+ ++ I N L+ MYA+ G + +
Sbjct: 73 DRTLYNTLLKRCTQLGKLKE----GKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGA 128
Query: 191 FKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARC 250
+LFD++ ++ V+WTS+++ +A+
Sbjct: 129 RRLFDEMPHRD-----------------------------------MVSWTSMITGYAQN 153
Query: 251 GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVK 310
R + + LF M G E ++ ++ C +A+ + G+ IH K
Sbjct: 154 DRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWK---------- 203
Query: 311 NALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGG 370
YG H +V V ++L+ YA G EA+ VF +L
Sbjct: 204 ------YGCHSNVFVG---------------SSLVDMYARCGYLGEAMLVFDKLGC---- 238
Query: 371 SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNI 430
N +SW+A+I +A G GEEAL LF +MQ T S LLS C+ L
Sbjct: 239 ----KNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQ 294
Query: 431 GREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
G+ +H H+++ S V N LL+MY K G + + VF+++ K D+++ NSM+ GY
Sbjct: 295 GKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQ 354
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQME 550
+GLG+ A F+EMI G +P+ + F++VL+ACSHA L++EG+ F +M R++ IEP++
Sbjct: 355 HGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLM-RKYNIEPKVS 413
Query: 551 HYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGL 610
HYA +VDLLGRAGLL +A ++ MP+EP +WG LL + +MHKNT++ A ++F L
Sbjct: 414 HYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFEL 473
Query: 611 ITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSL 670
G++ LL+NIYA++GRWED AKVR K G+KK SW+EV+ +H+F + +
Sbjct: 474 DPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVA 533
Query: 671 QSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ + ++ E+L +++ G VPD +L
Sbjct: 534 HPQKEKIHKMWEKLNQKIKEIGYVPDTSHVL 564
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 194/406 (47%), Gaps = 63/406 (15%)
Query: 30 LLDC---------FDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFG 77
L+DC ++ LL++C + +LK+ VH ++ + + +L +YAR G
Sbjct: 64 LIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCG 123
Query: 78 RLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPL 137
L AR +F+ P + W S++ N +AL L+ +M G + FT
Sbjct: 124 SLEGARRLFDEMP---HRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSS 180
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
+++ C +M S+ + G+ +H + G NV + + L+ MYA+ G + ++ +FDK+
Sbjct: 181 LVKCCGYMASY----NCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKL 236
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
KN +SWN + +G+A + + AL LF RM+ EG P T+++LLSS + G LE+
Sbjct: 237 GCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQ-- 294
Query: 258 DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
GK +H ++K + +V N L+ +Y
Sbjct: 295 ---------------------------------GKWLHAHLMKSSQKLVGYVGNTLLHMY 321
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
K G ++ A+ +F ++ + ++VS N+++ YA+ GL EA + F ++ + PN
Sbjct: 322 AKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFG----IEPND 377
Query: 378 ISWSAVIGAFASNGR----GEEALDLFRKMQLAKVVANSVTISGLL 419
I++ +V+ A S+ R G+ L RK + V++ TI LL
Sbjct: 378 ITFLSVLTA-CSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLL 422
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 175/549 (31%), Positives = 296/549 (53%), Gaps = 39/549 (7%)
Query: 145 MGSFRFRFSFGQI--VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
M S R SF + VH H +++ + ++ +++ + G+++ + ++F +VR N
Sbjct: 17 MASLRACASFRDLLRVHAHAVRLSLSQSSYLATQIVHLCNAHGRVAHATRVFSQVREPNL 76
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
N M +A N A+ ++ RM L W S D F
Sbjct: 77 HLHNAMIKAYAQNHRHLDAITVYIRM----LRRRPFPWISCTGG-----------DRF-- 119
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
+L C L A +GK +HG V++ G E V+N+LI +Y + GD
Sbjct: 120 -----------TYPFLLKACGGLMALDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGD 168
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
+ +A+ +F ++E+++VSWN +I+++A G +A VF+ SM V+SW+A
Sbjct: 169 LVLARKVFDGMQERDVVSWNTVISAHARLGQMRKARAVFN--------SMPDKTVVSWTA 220
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVS 442
++ + + G A++ FR MQ+ + V+I +L CA+ AL +GR I+ + R
Sbjct: 221 LVSGYTAAGDFSGAVEAFRLMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCNRHQ 280
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFE 502
M + V N L+ MY KCGC+++ +F + +KD+I+W++M+ G +G + A+ F
Sbjct: 281 MLRETYVCNALVEMYAKCGCIDQALQLFNGMAEKDVISWSTMVGGLAAHGRAQEAVQLFT 340
Query: 503 EMIEAG-FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
EM G KP+G+ FV +LSACSHAGL++EG FD M + IEP +EHY C+VDLL R
Sbjct: 341 EMERQGTVKPNGITFVGLLSACSHAGLLDEGLDYFDRMNDVYGIEPGVEHYGCIVDLLCR 400
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLL 621
+G +Q D++ +MP+ +A +WG++LN+CR H + D A A ++ L E G+ ++L
Sbjct: 401 SGQIQRTLDLISDMPLPADAKIWGSVLNACRSHGDVDTAVLAAERLVALEPEDVGNLVML 460
Query: 622 SNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVL 681
+N+YAA+ RW + A R + +++ ++K G S IEV + F +G L+ + + VL
Sbjct: 461 ANVYAAARRWSEVANTRKAIRSRSMRKTPGCSLIEVDNVVQEFVAGEDLKPEFGGLSGVL 520
Query: 682 EELALQMEN 690
+ LA Q+ +
Sbjct: 521 DILASQLAD 529
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 191/374 (51%), Gaps = 23/374 (6%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
L+ C + L +VH + + S++LA +++ + GR+ A VF + +
Sbjct: 20 LRACASFRDLLRVHAHAVRLSLSQSSYLATQIVHLCNAHGRVAHATRVFSQV----REPN 75
Query: 98 L-LWNSILRVNVSNGLYENALKLYVKMRKLGVL-------GDGFTFPLVIRACKFMGSFR 149
L L N++++ N + +A+ +Y++M + GD FT+P +++AC +
Sbjct: 76 LHLHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKACGGL---- 131
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+ VH HV++ G + N + N LI MY + G + + K+FD ++ ++ +SWN +
Sbjct: 132 MALDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVSWNTVI 191
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
S A A +F M + V+WT+L+S + G ++ F +M+ G E
Sbjct: 192 SAHARLGQMRKARAVFNSMP----DKTVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGFE 247
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
+I VL CA L A +G+ I+ + + +V NAL+ +Y K G + A L
Sbjct: 248 PDDVSIVAVLPACAQLGALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQL 307
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
F+ + EK+++SW+ ++ A G EAV++F+++E+ G++ +PN I++ ++ A +
Sbjct: 308 FNGMAEKDVISWSTMVGGLAAHGRAQEAVQLFTEMER--QGTV-KPNGITFVGLLSACSH 364
Query: 390 NGRGEEALDLFRKM 403
G +E LD F +M
Sbjct: 365 AGLLDEGLDYFDRM 378
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 125/303 (41%), Gaps = 43/303 (14%)
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+H H VR+S++++ + ++++ G + VF Q+ + +L N+MI Y N
Sbjct: 32 VHAHAVRLSLSQSSYLATQIVHLCNAHGRVAHATRVFSQVREPNLHLHNAMIKAYAQNHR 91
Query: 494 GENALATFEEMIEAGFKP-------DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
+A+ + M+ P D + +L AC ++ G+++ +VR E
Sbjct: 92 HLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKACGGLMALDLGKQVHGHVVRS-GCE 150
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS----CRMHKNTDVAEA 602
++++ RAG L A + M E + W T++++ +M K V +
Sbjct: 151 SNAIVQNSLIEMYTRAGDLVLARKVFDGM-QERDVVSWNTVISAHARLGQMRKARAVFNS 209
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG-----------LKKVAG 651
M + T S+ L + Y A+G + A + + +G L A
Sbjct: 210 MPDK-------TVVSWTALVSGYTAAGDFSGAVEAFRLMQMEGFEPDDVSIVAVLPACAQ 262
Query: 652 QSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL---------ALQMENKGCVPDNDIILW 702
+E+ R I+ + + + + + VC L E+ ALQ+ N + + D+I W
Sbjct: 263 LGALELGRWIYAYCNRHQMLRE-TYVCNALVEMYAKCGCIDQALQLFNG--MAEKDVISW 319
Query: 703 EMM 705
M
Sbjct: 320 STM 322
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/618 (30%), Positives = 317/618 (51%), Gaps = 84/618 (13%)
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ +LL + R+ L A+K ++ G+ D T+ +I+ C +
Sbjct: 21 YSSTDQTLLLSEFTRLCYQRDL-PRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHE 79
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G ++ H+ G + + +VN LI MY K ++D+ +LFD++ +N IS
Sbjct: 80 ----GNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVIS------ 129
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
WT+++S++++C ++ ++L +M + +
Sbjct: 130 -----------------------------WTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+ VL C ++ M +H +IK G E VFV++ALI V+ K G+
Sbjct: 161 NVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEP------- 210
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
++A+ VF ++ D I W+++IG FA N
Sbjct: 211 ------------------------EDALSVFDEMVTGDA--------IVWNSIIGGFAQN 238
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
R + AL+LF++M+ A +A T++ +L C A L +G + H H+V+ ++++++
Sbjct: 239 SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY--DQDLILN 296
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
N L++MY KCG LE+ VF Q++++D+ITW++MISG NG + AL FE M +G K
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
P+ + V VL ACSHAGL+ +G F M + + I+P EHY CM+DLLG+AG L +A
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVK 416
Query: 571 IVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGR 630
++ M EP+A W TLL +CR+ +N +AE A ++ L E G+Y LLSNIYA S +
Sbjct: 417 LLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQK 476
Query: 631 WEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
W+ ++R + +G+KK G SWIEV ++IH F G++ + V + L +L ++
Sbjct: 477 WDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTG 536
Query: 691 KGCVPDNDIILWEMMGKK 708
G VP+ + +L ++ G++
Sbjct: 537 IGYVPETNFVLQDLEGEQ 554
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 180/374 (48%), Gaps = 54/374 (14%)
Query: 34 FDHLLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ L++ C + +H+ + L G FL ++++Y +F L DA +F+ P
Sbjct: 64 YSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMP 123
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + W +++ +++ AL+L V M + V + +T+ V+R+C M R
Sbjct: 124 ---QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVR- 179
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
++H +++ G + +V + + LI ++AK+G+ D+ +FD++ + I WN +
Sbjct: 180 ------MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIG 233
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
GFA N D ALELFKRM+ G T TS
Sbjct: 234 GFAQNSRSDVALELFKRMKRAGFIAEQATLTS---------------------------- 265
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
VL C LA +G H ++K ++ + + NAL+ +Y K G ++ A +F
Sbjct: 266 -------VLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVF 316
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
++++E+++++W+ +I+ A+ G EA+++F +++ S +PN I+ V+ A +
Sbjct: 317 NQMKERDVITWSTMISGLAQNGYSQEALKLFERMK----SSGTKPNYITIVGVLFACSHA 372
Query: 391 GRGEEALDLFRKMQ 404
G E+ FR M+
Sbjct: 373 GLLEDGWYYFRSMK 386
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 152/323 (47%), Gaps = 64/323 (19%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+ +L+ C + ++ +H +I G + F+ + ++ ++A+ G DA +VF+
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM---V 221
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+++WNSI+ N + AL+L+ +M++ G + + T V+RAC +
Sbjct: 222 TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA------- 274
Query: 154 FGQIVHNHVLQMGFQGNVHIV---------NELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
+L++G Q +VHIV N L+ MY K G + D+ ++F++++ ++ I+
Sbjct: 275 --------LLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVIT 326
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
W+ M SG A N AL+LF+RM+ G +PN++T +L + + G LE+ F M+
Sbjct: 327 WSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 386
Query: 265 K-RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV 323
K GI D +H G +I + GK G +
Sbjct: 387 KLYGI---------------DPVREHYG--------------------CMIDLLGKAGKL 411
Query: 324 KVAQNLFSEIE-EKNIVSWNALI 345
A L +E+E E + V+W L+
Sbjct: 412 DDAVKLLNEMECEPDAVTWRTLL 434
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 164/415 (39%), Positives = 245/415 (59%), Gaps = 9/415 (2%)
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
VF A+I + GDV AQ LF + EK++VS A++T YA+ G D A +F +E+
Sbjct: 93 VFFWTAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEE 152
Query: 367 LDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
DG + W+ +I + NG EAL LFR+M AK N VT+ +LS C +
Sbjct: 153 RDG--------VCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLG 204
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
AL GR +H ++ + N+ V L++MY KCG LE+ LVF++I+ KD++ WNSMI
Sbjct: 205 ALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIV 264
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
GY M+G + AL F+ M G P + F+ +LSAC H+G V EG IF+ M E+ IE
Sbjct: 265 GYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIE 324
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
P++EHY CMV+LLGRAG +++A ++VKNM +EP+ +WGTLL +CR+H + E +
Sbjct: 325 PKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVEL 384
Query: 607 IFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSS 666
+ +G+Y+LLSNIYAA G W+ A++R K G+KK G S IEV K+H F +
Sbjct: 385 LVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLA 444
Query: 667 GNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNI 721
G K + +LEE+ +++ G P DI+L + +G+ +R + ++ +
Sbjct: 445 GGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHD-IGETEKERSLEVHSEKL 498
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 8/222 (3%)
Query: 53 QLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGL 112
QL T S +L+ YA+ G L AR +F+ + + WN ++ NG+
Sbjct: 114 QLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGME---ERDGVCWNVMIDGYTQNGM 170
Query: 113 YENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVH 172
AL L+ +M K + T V+ AC +G+ G+ VH+++ G Q NVH
Sbjct: 171 PNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALES----GRWVHSYIENNGIQFNVH 226
Query: 173 IVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG 232
+ L+ MY+K G + D+ +FDK+ K+ ++WN M G+A++ AL+LFK M G
Sbjct: 227 VGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMG 286
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAE 273
L P +T+ +LS+ G + E D+F+ M+ GIE E
Sbjct: 287 LHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIE 328
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 167/474 (35%), Positives = 269/474 (56%), Gaps = 17/474 (3%)
Query: 240 WTSLLSSHARC-----GRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
W +L+ +H + G + +F MR G++ +L A + H+G+ +
Sbjct: 27 WNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLGRSV 86
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
H +++ G FV+ +LI +Y G++ A+ +F EI + ++ SWN++I + +AGL
Sbjct: 87 HAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLV 146
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA---KVVAN 411
D A +F+ M NVISWS +I + G+ +EAL LFR+MQ+ V N
Sbjct: 147 DMARNLFA--------VMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPN 198
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
T+SG+L+ C AL G+ H ++ + M ++++ L++MY KCG +E+ VF
Sbjct: 199 EFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFS 258
Query: 472 QI-EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
+ KD++ W++MISG M+GL E + F +MI G +P+ V F+AV AC H GLV+
Sbjct: 259 NLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVS 318
Query: 531 EGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
EG+ M ++ I P ++HY CMVDL GRAG ++EA ++VK+MPMEP+ VWG LL+
Sbjct: 319 EGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSG 378
Query: 591 CRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVA 650
RMH + + E ++ L +G+Y+LLSN+YA GRWED VR +T G+KKV
Sbjct: 379 SRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVP 438
Query: 651 GQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G S IEV +H F G+ + + + +LEE+ +++ +G V + +L ++
Sbjct: 439 GCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNTKEVLLDL 492
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 210/456 (46%), Gaps = 63/456 (13%)
Query: 97 SLLWNSILRVNV-----SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR 151
S LWN+++R +V G + + ++V+MR GV D TFP ++++
Sbjct: 24 SFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHL- 82
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
G+ VH +L+ G + + LI MY+ G + + ++FD++ + SWN + +
Sbjct: 83 ---GRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINA 139
Query: 212 FALNFDC---DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG- 267
NF D A LF M E N ++W+ +++ + RCG+ +E + LF M+ G
Sbjct: 140 ---NFQAGLVDMARNLFAVMP----ERNVISWSCMINGYVRCGQYKEALALFREMQMLGV 192
Query: 268 --IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
+ ++ VL+ C L A GK H ++ K G V + ALI +Y K G V+
Sbjct: 193 NDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEK 252
Query: 326 AQNLFSEI-EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A +FS + K++++W+A+I+ A GL +E V +FS++ ++ G RPN +++ AV
Sbjct: 253 ATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKM--INQGV--RPNAVTFLAVF 308
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
A G E D R+M + ++ G
Sbjct: 309 CACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGC-------------------------- 342
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIE-KKDLITWNSMISGYGMNGLGENALATFEE 503
++++Y + G ++E V + + + D++ W +++SG M+G E ++
Sbjct: 343 --------MVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIETCELALKK 394
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+IE G A+V + + + G + R + D+M
Sbjct: 395 LIELEPTNSG-AYVLLSNVYAKRGRWEDVRHVRDLM 429
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 180/432 (41%), Gaps = 95/432 (21%)
Query: 34 FDHLLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F LLQ + +H + VH Q++ G F+ ++S+Y+ G L AR VF+ P
Sbjct: 67 FPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIP 126
Query: 91 FDCKSSSLLWNSILRVNVSNGL-------------------------------YENALKL 119
S WNSI+ N GL Y+ AL L
Sbjct: 127 QPDLPS---WNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALAL 183
Query: 120 YVKMRKLGV---LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNE 176
+ +M+ LGV + FT V+ AC +G+ G+ H ++ + G +V +
Sbjct: 184 FREMQMLGVNDVRPNEFTMSGVLAACGRLGALEH----GKWAHAYIDKCGMPVDVVLGTA 239
Query: 177 LIGMYAKMGQMSDSFKLFDKVRV-KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
LI MYAK G + + +F + K+ ++W+ M SG A++ + + LF +M +G+ P
Sbjct: 240 LIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRP 299
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
N VT+ ++ + G + E D M E +++ ++ H G
Sbjct: 300 NAVTFLAVFCACVHGGLVSEGKDYLRRM--------TEDYSIIPTI------QHYG---- 341
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE-EKNIVSWNALITS---YAEA 351
++ +YG+ G +K A N+ + E +++ W AL++ + +
Sbjct: 342 ----------------CMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDI 385
Query: 352 GLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE---ALDLFRKMQLAKV 408
C+ A++ +LE + G ++ + +A GR E+ DL M + KV
Sbjct: 386 ETCELALKKLIELEPTNSG--------AYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKV 437
Query: 409 VANS-VTISGLL 419
S + + G+L
Sbjct: 438 PGCSLIEVGGVL 449
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 319 bits (818), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 171/534 (32%), Positives = 307/534 (57%), Gaps = 51/534 (9%)
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
HVL+ G+ + ++ N ++G+YAK G + + KLFD++ + WN+M SG+ + +
Sbjct: 109 HVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEE 168
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRL--------------------------- 253
A LF M + + N +TWT++++ HA+ G L
Sbjct: 169 ASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQ 228
Query: 254 ----EETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGK-VIHGFVIKGGFEDYV 307
EET+ LF DM+ ++ A V+S C+ L + + ++ K GF
Sbjct: 229 GGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNY 288
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEI---EEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
FVK AL+ ++ K G+++ A +F ++ + ++ V WNA+I++YA G A +F ++
Sbjct: 289 FVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKM 348
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV--ANSVTISGLLSVC 422
+ D +SW+++I + NG +A+ LF +M ++ + VT+ + S C
Sbjct: 349 PQRD--------TVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSAC 400
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
L +G + + +I V N L+NMY +CG +++ L+F+++ +DL+++N
Sbjct: 401 GHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYN 460
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
++ISG+ +G G ++ +M E G +PD + ++A+L+ACSHAGL++EG+R+F+ + +
Sbjct: 461 TLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESI--K 518
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
F P ++HYACM+D+LGRAG L+EA ++++MPMEP+A ++G+LLN+ +HK ++ E
Sbjct: 519 F---PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGEL 575
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
A+++F + +G+Y LLSNIYA++GRW++ KVR + + +G+KK G SW+E
Sbjct: 576 AAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLE 629
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 108/241 (44%), Gaps = 39/241 (16%)
Query: 58 GANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENAL 117
G + F+ +L ++A+ G L A +FE SS+ WN+++ G +A
Sbjct: 283 GFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAK 342
Query: 118 KLYVKMRKLGVLG---------------------------------DGFTFPLVIRACKF 144
L+ KM + + D T V AC
Sbjct: 343 HLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGH 402
Query: 145 MGSFRF-RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
+G ++ + NH+ Q ++ + N LI MY++ G M D+ +F ++ ++ +
Sbjct: 403 LGELGLGNWAVSILKVNHI-----QISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLV 457
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
S+N + SGFA + ++EL +M+ +G+EP+ +T+ ++L++ + G L+E LF+ +
Sbjct: 458 SYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESI 517
Query: 264 R 264
+
Sbjct: 518 K 518
>gi|345505216|gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
Length = 617
Score = 319 bits (818), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 189/639 (29%), Positives = 334/639 (52%), Gaps = 62/639 (9%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYA--------RFGRL-FDARNVF 86
LL +CKT + ++H +LI TG ++ L+ R++ +A F RL F +V
Sbjct: 20 QLLGRCKTSEDVSKIHARLITTGLIKNSNLSTRIVLAFAASPRPYLAEFARLVFREYHVC 79
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
++P LWN++++ + + AL L+ M + GV D F+ LV++AC +G
Sbjct: 80 SSSPGGEVEDPFLWNAVIKSHSHGKDPKQALLLFCLMLENGVSVDKFSMSLVLKACSRLG 139
Query: 147 SFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWN 206
+ G +H + + G ++ + N LIG+Y K G + + ++FD++ ++ +S+N
Sbjct: 140 FVKG----GLQIHGILRKTGLCSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFN 195
Query: 207 MMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
M G+ + A ELF M E N ++W S++S +A +T D
Sbjct: 196 SMIDGYVKRGLIESARELFDLMPRE--VKNLISWNSIISGYA------QTSD-------- 239
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
G+++ + A + E + N++I Y KHG ++ A
Sbjct: 240 GVDIASNLFAEMP------------------------EKDLISWNSMIDGYVKHGRIEDA 275
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
++LF + +++V+W +I YA+ G +A +F Q+ D V+S+++++
Sbjct: 276 KDLFDAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRD--------VVSYNSMMAG 327
Query: 387 FASNGRGEEALDLFRKMQL-AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
+ N EAL++F M+ + + + T+ +LS A+ L+ ++H ++V
Sbjct: 328 YVQNKYHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFL 387
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
+ L++MY KCG ++ LVFE IE K + WN+MI G ++GLGE+A ++
Sbjct: 388 GGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIE 447
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
KPD + FV VL+ACSH+GLV EG F++M R+ +IEP+++HY CMVD+L R+G +
Sbjct: 448 RRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSI 507
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
+ A ++++ MP+EPN +W T L +C HK + E + + SY+LLSN+Y
Sbjct: 508 ELAKNLIQEMPIEPNDVIWRTFLTACNHHKEFETGELVGKHLILQAGYNPSSYVLLSNMY 567
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
A+ G+W+D ++R K + ++K+ G SWIE+ ++H F
Sbjct: 568 ASFGKWKDVRRIRTMMKERKIEKIPGCSWIELDGRVHEF 606
>gi|28876027|gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 704
Score = 319 bits (818), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 177/570 (31%), Positives = 296/570 (51%), Gaps = 50/570 (8%)
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
F + RAC+ + R +H G + N L+ YA +G ++ + +LF
Sbjct: 113 FSHLFRACRALRPLR-------QLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELF 165
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
+++ +N +SWN++F G+ N D GA +LF M E N TW ++++ G E
Sbjct: 166 ERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMP----ERNVATWNAMVAGLTNLGFDE 221
Query: 255 ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
E++ F MR+ G+ + V CA L G+ +H +V++ G + + V ++L
Sbjct: 222 ESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLA 281
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
+Y + G ++ + + + +IVS N +I +
Sbjct: 282 HMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQ------------------------ 317
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
NG E AL+ F M+ V A+ VT +S C++ AAL G++I
Sbjct: 318 ---------------NGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQI 362
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
HG V++ ++K + V L++MY +CGCL + VF D ++MIS YG +G G
Sbjct: 363 HGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHG 422
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
+ A+ F++M+ G +P V F+A+L ACSH+GL EG F++M + + ++P ++HY C
Sbjct: 423 QKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTC 482
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
+VDLLGR+G L EA ++ +MP+ P+ +W TLL++C+ KN D+AE +A ++ L
Sbjct: 483 VVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHD 542
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
+ SY+LLSNI A S RW D ++VR + + ++K G SW+E+K IH F +G+
Sbjct: 543 SASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQ 602
Query: 675 KNVCEVLEELALQMENKGCVPDNDIILWEM 704
K + E LEE+ ++ G PD ++L +M
Sbjct: 603 KEIDECLEEMMAKIRQCGYSPDMSMVLHDM 632
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 181/413 (43%), Gaps = 72/413 (17%)
Query: 19 RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGR 78
RPF + ++++ F HL + C+ + L+Q+H +GA F A ++ YA G
Sbjct: 99 RPFRGVLWSDAA-RLFSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGD 157
Query: 79 LFDARNVFETAP--------------------------FD--CKSSSLLWNSILRVNVSN 110
L AR +FE P FD + + WN+++ +
Sbjct: 158 LTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNL 217
Query: 111 GLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN 170
G E +L ++ MR+ G+ D F V R C + G+ VH +V++ G +
Sbjct: 218 GFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDV----VTGRQVHAYVVRSGLDRD 273
Query: 171 VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
+ + + L MY + G + + + + + +S N + +G N D +GALE F M
Sbjct: 274 MCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRS 333
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
G+ + VT+ S +SS C+DLAA
Sbjct: 334 VGVAADVVTFVSAISS-----------------------------------CSDLAALAQ 358
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
G+ IHG V+K G + V V L+ +Y + G + ++ +F + +A+I++Y
Sbjct: 359 GQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGF 418
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
G +A+E+F Q+ ++GG+ P+ +++ A++ A + +G EE +D F M
Sbjct: 419 HGHGQKAIELFKQM--MNGGA--EPSDVTFLALLYACSHSGLKEEGMDCFELM 467
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 319 bits (818), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 172/484 (35%), Positives = 271/484 (55%), Gaps = 21/484 (4%)
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK--RGIEVGA 272
N D D A LFK E ++PN + +++ + T+D + M + R +
Sbjct: 33 NEDMDYASFLFK----EVIDPNAYLYNAMIRACTHNSMYSLTIDFYKQMLREYRNSQTSE 88
Query: 273 EAI-------AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
+ I V+ CA L ++GK +H K G + ++ +NALI +Y K ++
Sbjct: 89 DLILPDEFTFPFVVKACARLGLHNLGKQVHAQFFKFGKKSHLITENALIDMYTKCDNLLD 148
Query: 326 AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
A NLF E+ E+ +SWN +I+ + G A +F + M ++SW+A+I
Sbjct: 149 AHNLFDEMHERGAISWNGIISGHVRLGQMRRARALFDE--------MPNRTIVSWTAIIS 200
Query: 386 AFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK 445
+ G +ALD+FR+MQ+A + + +I +L CA+ AL G+ IH R + +
Sbjct: 201 GYTRIGSYIDALDVFREMQIAGIEPDEASIISVLPACAKLGALETGKWIHMFCARNGLLR 260
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
+ N L+ MY KCGC+++ +F+Q+ +D+I+W++MI G +G A+A FE M
Sbjct: 261 RTCICNALIEMYTKCGCIDQACQLFDQMRGRDVISWSTMIGGLANHGKVREAIAIFERMK 320
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
+ KP+G+ FV +LSAC+HAG EG FD M ++F IEP++EHY +VDLLGRAG L
Sbjct: 321 QTNIKPNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEHYGSLVDLLGRAGRL 380
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
+A DIV+ MPM+P++ +WG+LL+SCR H N +VA + L + TG+Y+LLSNIY
Sbjct: 381 SQALDIVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAMEHLEELEPDDTGNYVLLSNIY 440
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A G+W+D +++R ++K +KK G S IEV F SG+ + K + +LE LA
Sbjct: 441 ADLGKWDDVSRMRKLVRSKRMKKTPGCSLIEVNNVAQEFVSGDDSKPYSKEIFWLLELLA 500
Query: 686 LQME 689
+
Sbjct: 501 FHQD 504
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 179/370 (48%), Gaps = 28/370 (7%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
+LK+ H +I + S FL +++ + R + A +F+ ++ L+N+++R
Sbjct: 3 ELKKNHALVIKYALSQSNFLVTKMIDVCDRNEDMDYASFLFKEV---IDPNAYLYNAMIR 59
Query: 106 VNVSNGLYENALKLYVKMRKLG---------VLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
N +Y + Y +M + +L D FTFP V++AC +G + G+
Sbjct: 60 ACTHNSMYSLTIDFYKQMLREYRNSQTSEDLILPDEFTFPFVVKACARLG----LHNLGK 115
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
VH + G + ++ N LI MY K + D+ LFD++ + ISWN + SG
Sbjct: 116 QVHAQFFKFGKKSHLITENALIDMYTKCDNLLDAHNLFDEMHERGAISWNGIISGHVRLG 175
Query: 217 DCDGALELFKRMELEGLEPN--FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEA 274
A LF M PN V+WT+++S + R G + +D+F M+ GIE +
Sbjct: 176 QMRRARALFDEM------PNRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGIEPDEAS 229
Query: 275 IAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIE 334
I VL CA L A GK IH F + G + NALI +Y K G + A LF ++
Sbjct: 230 IISVLPACAKLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQLFDQMR 289
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
++++SW+ +I A G EA+ +F ++++ + +PN I++ ++ A A G E
Sbjct: 290 GRDVISWSTMIGGLANHGKVREAIAIFERMKQTNI----KPNGITFVGLLSACAHAGFWE 345
Query: 395 EALDLFRKMQ 404
E L F M+
Sbjct: 346 EGLMYFDTMK 355
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 103/197 (52%), Gaps = 7/197 (3%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S + R G++ AR +F+ P + + W +I+ G Y +AL ++ +M+ G+
Sbjct: 167 IISGHVRLGQMRRARALFDEMP---NRTIVSWTAIISGYTRIGSYIDALDVFREMQIAGI 223
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D + V+ AC +G+ G+ +H + G I N LI MY K G +
Sbjct: 224 EPDEASIISVLPACAKLGAL----ETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCID 279
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ +LFD++R ++ ISW+ M G A + A+ +F+RM+ ++PN +T+ LLS+ A
Sbjct: 280 QACQLFDQMRGRDVISWSTMIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACA 339
Query: 249 RCGRLEETMDLFDMMRK 265
G EE + FD M+K
Sbjct: 340 HAGFWEEGLMYFDTMKK 356
>gi|15228117|ref|NP_181268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216848|sp|Q9ZUT5.1|PP191_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37310
gi|4056485|gb|AAC98051.1| hypothetical protein [Arabidopsis thaliana]
gi|110741249|dbj|BAF02175.1| hypothetical protein [Arabidopsis thaliana]
gi|330254288|gb|AEC09382.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 204/670 (30%), Positives = 343/670 (51%), Gaps = 61/670 (9%)
Query: 34 FDHLLQQCKTIHQLK----QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA 89
+ HL+Q T H+L Q+H +++V FLA++++S Y R R A +VF+
Sbjct: 25 YGHLIQHF-TRHRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEI 83
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVK------MRKLGVLGDGFTFPLVIRACK 143
++ +N++L S +Y +A L++ D + V++A
Sbjct: 84 TV---RNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALS 140
Query: 144 FMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
F + S + VH V++ GF +V + N +I Y K + + K+FD++ ++ +
Sbjct: 141 GCDDF-WLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVV 199
Query: 204 SWNMMFSGFALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
SWN M SG++ + + +++K M +PN VT S+ + CG+ + +F +
Sbjct: 200 SWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQA---CGQSSDL--IFGL 254
Query: 263 -MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
+ K+ IE I + LS+C NA+I Y K G
Sbjct: 255 EVHKKMIE---NHIQMDLSLC----------------------------NAVIGFYAKCG 283
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
+ A+ LF E+ EK+ V++ A+I+ Y GL EA+ +FS++E + + +W+
Sbjct: 284 SLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI--------GLSTWN 335
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
A+I N EE ++ FR+M N+VT+S LL S+ L G+EIH +R
Sbjct: 336 AMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRN 395
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
+ NI V +++ Y K G L VF+ + + LI W ++I+ Y ++G ++A + F
Sbjct: 396 GADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLF 455
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
++M G KPD V AVLSA +H+G + + IFD M+ ++ IEP +EHYACMV +L R
Sbjct: 456 DQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSR 515
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLL 621
AG L +A + + MP++P A VWG LLN + + ++A ++F + E TG+Y ++
Sbjct: 516 AGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIM 575
Query: 622 SNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVL 681
+N+Y +GRWE+A VR K GLKK+ G SWIE ++ + F + +S K + E++
Sbjct: 576 ANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEII 635
Query: 682 EELALQMENK 691
E L M +K
Sbjct: 636 EGLVESMSDK 645
>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
Length = 708
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 177/570 (31%), Positives = 296/570 (51%), Gaps = 50/570 (8%)
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
F + RAC+ + R +H G + N L+ YA +G ++ + +LF
Sbjct: 109 FSHLFRACRALRPLR-------QLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELF 161
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
+++ +N +SWN++F G+ N D GA +LF M E N TW ++++ G E
Sbjct: 162 ERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMP----ERNVATWNAMVAGLTNLGFDE 217
Query: 255 ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
E++ F MR+ G+ + V CA L G+ +H +V++ G + + V ++L
Sbjct: 218 ESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLA 277
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
+Y + G ++ + + + +IVS N +I +
Sbjct: 278 HMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQ------------------------ 313
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
NG E AL+ F M+ V A+ VT +S C++ AAL G++I
Sbjct: 314 ---------------NGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQI 358
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
HG V++ ++K + V L++MY +CGCL + VF D ++MIS YG +G G
Sbjct: 359 HGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHG 418
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
+ A+ F++M+ G +P V F+A+L ACSH+GL EG F++M + + ++P ++HY C
Sbjct: 419 QKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTC 478
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
+VDLLGR+G L EA ++ +MP+ P+ +W TLL++C+ KN D+AE +A ++ L
Sbjct: 479 VVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHD 538
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
+ SY+LLSNI A S RW D ++VR + + ++K G SW+E+K IH F +G+
Sbjct: 539 SASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQ 598
Query: 675 KNVCEVLEELALQMENKGCVPDNDIILWEM 704
K + E LEE+ ++ G PD ++L +M
Sbjct: 599 KEIDECLEEMMAKIRQCGYSPDMSMVLHDM 628
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 181/413 (43%), Gaps = 72/413 (17%)
Query: 19 RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGR 78
RPF + ++++ F HL + C+ + L+Q+H +GA F A ++ YA G
Sbjct: 95 RPFRGVLWSDAA-RLFSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGD 153
Query: 79 LFDARNVFETAP--------------------------FD--CKSSSLLWNSILRVNVSN 110
L AR +FE P FD + + WN+++ +
Sbjct: 154 LTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNL 213
Query: 111 GLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN 170
G E +L ++ MR+ G+ D F V R C + G+ VH +V++ G +
Sbjct: 214 GFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDV----VTGRQVHAYVVRSGLDRD 269
Query: 171 VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
+ + + L MY + G + + + + + +S N + +G N D +GALE F M
Sbjct: 270 MCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRS 329
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
G+ + VT+ S +SS C+DLAA
Sbjct: 330 VGVAADVVTFVSAISS-----------------------------------CSDLAALAQ 354
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
G+ IHG V+K G + V V L+ +Y + G + ++ +F + +A+I++Y
Sbjct: 355 GQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGF 414
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
G +A+E+F Q+ ++GG+ P+ +++ A++ A + +G EE +D F M
Sbjct: 415 HGHGQKAIELFKQM--MNGGA--EPSDVTFLALLYACSHSGLKEEGMDCFELM 463
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 193/599 (32%), Positives = 302/599 (50%), Gaps = 81/599 (13%)
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPL--VIRACKFMGSFRFRFSFGQIVHNHVLQM 165
V N +E++++++ M VLG+G F L VI + + G + ++
Sbjct: 6 VKNSCFEDSIRVFGDM----VLGNGPRFDLTTVIAVLPAVAELQ-ELKLGMQILCLAIKC 60
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
GF +V ++ LI +++K G++ + LF ++R K+ IS N M SGF N + + ++ LF
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
K LLSS R V + I ++ V +
Sbjct: 121 KE---------------LLSSGER--------------------VSSSTIVGLIPVYSPF 145
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
++ IHGF +K G + V AL VY + ++ A+ LF E EK + S
Sbjct: 146 GHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLAS----- 200
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
W+A+I NG + A+ LF+ MQ
Sbjct: 201 ----------------------------------WNAMISGCTQNGLTDAAISLFQTMQK 226
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
V N VT++ +LS CA+ AL++G +H + N+ V L++MY KCG +
Sbjct: 227 NNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITV 286
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
+F+ + +K+ +TWN+MISGYG++G G+ AL F +M+ + KP G+ F++VL ACSH
Sbjct: 287 ARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSH 346
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
AGLV EG IF MV +F EP EHYACMVD+LGRAG L++A + +K MP+EP VWG
Sbjct: 347 AGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWG 406
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
LL +C +HK+T++A + ++F L E G Y+L+SNIY+ ++ AA VR AK K
Sbjct: 407 ALLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKR 466
Query: 646 LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
L K G + IE+ + H+F+SG+ K + L++L +M G + +L ++
Sbjct: 467 LAKTPGCTLIEIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDL 525
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 175/387 (45%), Gaps = 43/387 (11%)
Query: 243 LLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
++S + E+++ +F DM+ G + VL A+L +G I IK
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
GF +V + LI ++ K G+V++A+ LF EI +K+++S NA+I+ + G +++V +F
Sbjct: 61 GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
+L L G ER +S TI GL+ V
Sbjct: 121 KEL--LSSG--ER-----------------------------------VSSSTIVGLIPV 141
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
+ + IHG V++ + + V L +Y + + +F++ +K L +W
Sbjct: 142 YSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASW 201
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
N+MISG NGL + A++ F+ M + P+ V ++LSAC+ G ++ G + +++
Sbjct: 202 NAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHS-LIK 260
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAE 601
R E + ++D+ + G + A ++ MP E N W +++ +H + A
Sbjct: 261 SNRFESNVYVSTALIDMYAKCGSITVARELFDLMP-EKNEVTWNAMISGYGLHGHGQEAL 319
Query: 602 AMASQIFGLITETTGSYMLLSNIYAAS 628
+ + + TG LS +YA S
Sbjct: 320 KLFYDMLSSSVKPTG-LTFLSVLYACS 345
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 121/233 (51%), Gaps = 8/233 (3%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H + G + + ++ + ++Y R + AR +F+ + +S WN+++
Sbjct: 154 IHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLAS---WNAMISGCTQ 210
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
NGL + A+ L+ M+K V + T ++ AC +G+ S G+ VH+ + F+
Sbjct: 211 NGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGAL----SLGEWVHSLIKSNRFES 266
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
NV++ LI MYAK G ++ + +LFD + KN ++WN M SG+ L+ AL+LF M
Sbjct: 267 NVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDML 326
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSV 281
++P +T+ S+L + + G ++E +F M+ G E AE A ++ +
Sbjct: 327 SSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDI 379
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 197/669 (29%), Positives = 328/669 (49%), Gaps = 84/669 (12%)
Query: 48 KQVHNQLIVTGANA-SAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
+ +H +I T +FL+ ++++Y++ L A++V + + W S++
Sbjct: 26 RTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHL---RTVVTWTSLISG 82
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
V N + AL + MR+ V + FTFP V +A F+ + + G+ +H L+ G
Sbjct: 83 CVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFV---QIPMT-GKQIHGLALKGG 138
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+V + MY K G D+ +FD++ +N +WN S + A+ FK
Sbjct: 139 MIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFK 198
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
EPN +T+ + L++ C D+
Sbjct: 199 EFLCVHGEPNSITFCAFLNA-----------------------------------CVDMV 223
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALIT 346
++G+ +H F+++ G+++ V V N LI YGK GD+ A+ +F+ I
Sbjct: 224 RLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGN----------- 272
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
R NV+SW +++ A N E A +F + +
Sbjct: 273 ---------------------------RKNVVSWCSMLAALVQNHEEERACMVFLQAR-K 304
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
+V IS +LS CAE L +GR +H V+ + NI V + L++MY KCG +E
Sbjct: 305 EVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENA 364
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI--EAGFKPDGVAFVAVLSACS 524
VF ++ +++L+TWN+MI GY G + AL FEEM G +P V +++LS CS
Sbjct: 365 EQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCS 424
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
G V G +IF+ M + IEP EH+AC+VDLLGR+GL+ A + ++NM ++P VW
Sbjct: 425 RVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVW 484
Query: 585 GTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTK 644
G LL +CRMH T++ + A ++F L +G++++LSN+ A++GRWE+A VR K
Sbjct: 485 GALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDI 544
Query: 645 GLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G+KK G SWI VK +IH+F + +S + +L +L M+ G VPD ++ L+++
Sbjct: 545 GIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNLSLFDL 604
Query: 705 MGKKNVKRI 713
++ +
Sbjct: 605 EDEEKASEV 613
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 3/162 (1%)
Query: 430 IGREIHGHVVRVSMNK-NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+GR IH H++R + + N L+NMY K L V + ++TW S+ISG
Sbjct: 24 LGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGC 83
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
N AL F M +P+ F V A + + G++I + ++ I
Sbjct: 84 VHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDV 143
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNS 590
+C D+ + G +A ++ MP + N W +++
Sbjct: 144 FVGCSCF-DMYCKTGFRGDACNMFDEMP-QRNLATWNAYISN 183
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 171/534 (32%), Positives = 307/534 (57%), Gaps = 51/534 (9%)
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
HVL+ G+ + ++ N ++G+YAK G + + KLFD++ + WN+M SG+ + +
Sbjct: 52 HVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEE 111
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRL--------------------------- 253
A LF M + + N +TWT++++ HA+ G L
Sbjct: 112 ASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQ 171
Query: 254 ----EETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGK-VIHGFVIKGGFEDYV 307
EET+ LF DM+ ++ A V+S C+ L + + ++ K GF
Sbjct: 172 GGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNY 231
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEI---EEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
FVK AL+ ++ K G+++ A +F ++ + ++ V WNA+I++YA G A +F ++
Sbjct: 232 FVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKM 291
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV--ANSVTISGLLSVC 422
+ D +SW+++I + NG +A+ LF +M ++ + VT+ + S C
Sbjct: 292 PQRD--------TVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSAC 343
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
L +G + + +I V N L+NMY +CG +++ L+F+++ +DL+++N
Sbjct: 344 GHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYN 403
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
++ISG+ +G G ++ +M E G +PD + ++A+L+ACSHAGL++EG+R+F+ + +
Sbjct: 404 TLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESI--K 461
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
F P ++HYACM+D+LGRAG L+EA ++++MPMEP+A ++G+LLN+ +HK ++ E
Sbjct: 462 F---PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGEL 518
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
A+++F + +G+Y LLSNIYA++GRW++ KVR + + +G+KK G SW+E
Sbjct: 519 AAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLE 572
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 108/241 (44%), Gaps = 39/241 (16%)
Query: 58 GANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENAL 117
G + F+ +L ++A+ G L A +FE SS+ WN+++ G +A
Sbjct: 226 GFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAK 285
Query: 118 KLYVKMRKLGVLG---------------------------------DGFTFPLVIRACKF 144
L+ KM + + D T V AC
Sbjct: 286 HLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGH 345
Query: 145 MGSFRF-RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYI 203
+G ++ + NH+ Q ++ + N LI MY++ G M D+ +F ++ ++ +
Sbjct: 346 LGELGLGNWAVSILKVNHI-----QISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLV 400
Query: 204 SWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
S+N + SGFA + ++EL +M+ +G+EP+ +T+ ++L++ + G L+E LF+ +
Sbjct: 401 SYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESI 460
Query: 264 R 264
+
Sbjct: 461 K 461
>gi|222626043|gb|EEE60175.1| hypothetical protein OsJ_13106 [Oryza sativa Japonica Group]
Length = 628
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 177/570 (31%), Positives = 296/570 (51%), Gaps = 50/570 (8%)
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
F + RAC+ + R +H G + N L+ YA +G ++ + +LF
Sbjct: 47 FSHLFRACRALRPLR-------QLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELF 99
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
+++ +N +SWN++F G+ N D GA +LF M E N TW ++++ G E
Sbjct: 100 ERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMP----ERNVATWNAMVAGLTNLGFDE 155
Query: 255 ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
E++ F MR+ G+ + V CA L G+ +H +V++ G + + V ++L
Sbjct: 156 ESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLA 215
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
+Y + G ++ + + + +IVS N +I +
Sbjct: 216 HMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQ------------------------ 251
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
NG E AL+ F M+ V A+ VT +S C++ AAL G++I
Sbjct: 252 ---------------NGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQI 296
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
HG V++ ++K + V L++MY +CGCL + VF D ++MIS YG +G G
Sbjct: 297 HGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHG 356
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
+ A+ F++M+ G +P V F+A+L ACSH+GL EG F++M + + ++P ++HY C
Sbjct: 357 QKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTC 416
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
+VDLLGR+G L EA ++ +MP+ P+ +W TLL++C+ KN D+AE +A ++ L
Sbjct: 417 VVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHD 476
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
+ SY+LLSNI A S RW D ++VR + + ++K G SW+E+K IH F +G+
Sbjct: 477 SASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQ 536
Query: 675 KNVCEVLEELALQMENKGCVPDNDIILWEM 704
K + E LEE+ ++ G PD ++L +M
Sbjct: 537 KEIDECLEEMMAKIRQCGYSPDMSMVLHDM 566
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 181/413 (43%), Gaps = 72/413 (17%)
Query: 19 RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGR 78
RPF + ++++ F HL + C+ + L+Q+H +GA F A ++ YA G
Sbjct: 33 RPFRGVLWSDAA-RLFSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGD 91
Query: 79 LFDARNVFETAP--------------------------FD--CKSSSLLWNSILRVNVSN 110
L AR +FE P FD + + WN+++ +
Sbjct: 92 LTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNL 151
Query: 111 GLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN 170
G E +L ++ MR+ G+ D F V R C + G+ VH +V++ G +
Sbjct: 152 GFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDV----VTGRQVHAYVVRSGLDRD 207
Query: 171 VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
+ + + L MY + G + + + + + +S N + +G N D +GALE F M
Sbjct: 208 MCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRS 267
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
G+ + VT+ S +SS C+DLAA
Sbjct: 268 VGVAADVVTFVSAISS-----------------------------------CSDLAALAQ 292
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
G+ IHG V+K G + V V L+ +Y + G + ++ +F + +A+I++Y
Sbjct: 293 GQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGF 352
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
G +A+E+F Q+ ++GG+ P+ +++ A++ A + +G EE +D F M
Sbjct: 353 HGHGQKAIELFKQM--MNGGA--EPSDVTFLALLYACSHSGLKEEGMDCFELM 401
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 202/668 (30%), Positives = 338/668 (50%), Gaps = 88/668 (13%)
Query: 33 CFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPF 91
C L +QC + L+QVH Q++V + S +LS A +F AP
Sbjct: 20 CLVFLAKQCSSSKTLQQVHAQMVVKSSIHSP--NNHLLSKAIHLKNFTYASLLFSHIAP- 76
Query: 92 DCKSSSLLWNSILR-VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ +N ++R + + Y AL L+ +M L + + FTFP +C +
Sbjct: 77 --HPNDYAFNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVL-- 132
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
S + H+ V ++ + H + LI MY++ G+++ + K+FD++ ++
Sbjct: 133 --SPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRD--------- 181
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIE 269
V+W S+++ +A+ G E +++F +M R+ G E
Sbjct: 182 --------------------------LVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFE 215
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
++ VL C +L +G+ + GFV++ G ++ +ALI +Y K GD+ A+ +
Sbjct: 216 PDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRI 275
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
F DG M +VI+W+AVI +A
Sbjct: 276 F-------------------------------------DG--MAARDVITWNAVISGYAQ 296
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
NG +EA+ LF M+ V N +T++ +LS CA AL++G++I + + +I V
Sbjct: 297 NGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFV 356
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE--A 507
L++MY KCG L VF+++ +K+ +WN+MIS +G + AL+ F+ M +
Sbjct: 357 ATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGG 416
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
G +P+ + FV +LSAC HAGLVNEG R+FDMM F + P++EHY+CMVDLL RAG L E
Sbjct: 417 GARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYE 476
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A D+++ MP +P+ G LL +CR KN D+ E + I + +G+Y++ S IYA
Sbjct: 477 AWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYAN 536
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
WED+A++R+ + KG+ K G SWIEV+ +H F +G+ L D ++ +++ L +
Sbjct: 537 LNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDGLCLDSIDLSNIIDLLYEE 596
Query: 688 MENKGCVP 695
++ +G VP
Sbjct: 597 LKREGYVP 604
>gi|297744641|emb|CBI37903.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 175/520 (33%), Positives = 289/520 (55%), Gaps = 19/520 (3%)
Query: 86 FETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
F T P + L +I+++ N L E L R+ G+ D T +++ C
Sbjct: 14 FRTNPRKPRRRPCLVEAIVKLCKKNKLNEAVSSLENLARR-GLRLDSRTLASLLQHCADS 72
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQ-GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS 204
+ R G+ VH H+ G + + N LI MYAK G+ ++ K+FDK+ +N S
Sbjct: 73 RALRE----GKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYS 128
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
WN M SG+A A +LF +M E + V+W +++ +HA+CG +E + + R
Sbjct: 129 WNNMLSGYAKLGMIKPARKLFDKMP----EKDVVSWNTMVIAHAQCGYWDEALRFYSEFR 184
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
+ GI+ + A VL+VC L + + +HG ++ GF V + ++++ Y K G +
Sbjct: 185 QLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMG 244
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A+ LF E+ +++++W +++ YA+ G A E+F + M N +SW+A+I
Sbjct: 245 DARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVE--------MPEKNPVSWTALI 296
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
+A NG G +AL+LF KM L V + T S L CA A+L G++IH +++R++
Sbjct: 297 SGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQ 356
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK-DLITWNSMISGYGMNGLGENALATFEE 503
N +V + L++MY KCG L G VF+ + K D++ WN++IS +G GE A+ ++
Sbjct: 357 PNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDD 416
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M+ +G KPD + FV +L+ACSH+GLV +G F+ M ++ I P EHYAC++DLLGRAG
Sbjct: 417 MVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAG 476
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+E D ++ MP +P+ VW LL CR+H + + +++
Sbjct: 477 CFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIERLDSL 516
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 199/400 (49%), Gaps = 45/400 (11%)
Query: 37 LLQQC---KTIHQLKQVHNQLIVTG-ANASAFLAARVLSIYARFGRLFDARNVFETAP-- 90
LLQ C + + + K+VH L +TG FL+ ++++YA+ G+ +AR VF+
Sbjct: 65 LLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSAR 124
Query: 91 ------------------------FD--CKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
FD + + WN+++ + G ++ AL+ Y + R
Sbjct: 125 NLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFR 184
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
+LG+ +GF+F V+ C + + VH +L GF NV + + ++ Y K
Sbjct: 185 QLGIQCNGFSFAGVLTVCVKLK----EVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKC 240
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G M D+ KLFD++ ++ ++W M SG+A D A ELF M E N V+WT+L+
Sbjct: 241 GLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMP----EKNPVSWTALI 296
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
S +AR G + ++LF M + + L CA +A+ GK IH ++++ F+
Sbjct: 297 SGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQ 356
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEK-NIVSWNALITSYAEAGLCDEAVEVFSQ 363
V +ALI +Y K G + + + +F + K ++V WN +I++ A+ G +EA+++
Sbjct: 357 PNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDD 416
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+ + S +P+ I++ ++ A + +G ++ L+ F M
Sbjct: 417 MVR----SGAKPDKITFVVILNACSHSGLVQQGLNFFESM 452
Score = 96.7 bits (239), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 152/323 (47%), Gaps = 47/323 (14%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPF---------- 91
K + +QVH Q++V G ++ L++ VL Y + G + DAR +F+
Sbjct: 206 KEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMV 265
Query: 92 -------DCKSSSLL-----------WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGF 133
D KS++ L W +++ NG+ AL+L+ KM V D F
Sbjct: 266 SGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQF 325
Query: 134 TFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
TF + AC + S + G+ +H ++L++ FQ N +V+ LI MY+K G + K+
Sbjct: 326 TFSSCLCACASIASLK----HGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKV 381
Query: 194 FDKVRVK-NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
FD + K + + WN + S A + + A+++ M G +P+ +T+ +L++ + G
Sbjct: 382 FDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSGL 441
Query: 253 LEETMDLFDMMR-KRGIEVGAEAIAVVLSV-----CADLAADHMGKVIHGFVIKGGFEDY 306
+++ ++ F+ M GI E A ++ + C + D + K+ + +D
Sbjct: 442 VQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPY------KPDDR 495
Query: 307 VFVKNALICVYGKHGDVKVAQNL 329
V+ NAL+ V HG ++ +L
Sbjct: 496 VW--NALLGVCRIHGHIERLDSL 516
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 189/674 (28%), Positives = 331/674 (49%), Gaps = 84/674 (12%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE--TAPF 91
+L C + L ++ H + G + + F+ +L +Y + G + DA +F+ ++P
Sbjct: 148 VLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPN 207
Query: 92 DCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR 151
+ ++++ +G ++AL+L+ +M + + D V+ AC + +
Sbjct: 208 EVSFTAMMGGL-----AQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYN 262
Query: 152 FS----FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
+ Q +H V++ GF + H+ N LI MYAK +M ++ K+F+ + + +SWN+
Sbjct: 263 VARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNI 322
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVT---------------------------- 239
+ +G+ + ALE+ M+ G EPN VT
Sbjct: 323 LVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPS 382
Query: 240 ---WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHG 296
W +LLS + + ++T++LF M+ + ++ +AV+LS C+ L +GK +H
Sbjct: 383 VTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHS 442
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
+K + +FV + LI +Y K G V +AQ +F+ + E+++V
Sbjct: 443 ASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDVVC---------------- 486
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
W+++I A + EEA D F++M+ + + +
Sbjct: 487 -----------------------WNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYA 523
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
+++ CA +++ GR+IH V++ ++N+ V + L++MY KCG +++ L F + K
Sbjct: 524 SMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVK 583
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
+++ WN MI GY NG GE A+ FE M+ KPD V F+AVL+ CSH+GLV+E F
Sbjct: 584 NIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYF 643
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
+ M + I P +EHY C++D LGRAG E ++ MP + +A +W LL +C +H N
Sbjct: 644 NSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHN 703
Query: 597 TDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
++ E A +F L + Y+LLSNIYA GR DA+ VR ++G+ K G SW+
Sbjct: 704 AELGEFAAKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVN 763
Query: 657 VKRKIHMFSSGNSL 670
K F + L
Sbjct: 764 HKDGARAFMVADDL 777
Score = 203 bits (516), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 252/534 (47%), Gaps = 78/534 (14%)
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL 129
+S R G L AR++ P +++ WN+++ + AL++Y M + G+
Sbjct: 83 ISAACRAGDLAAARDLLGRMP---DRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLA 139
Query: 130 GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSD 189
FT V+ AC + + G+ H +++G GN + N L+GMY K G ++D
Sbjct: 140 PTNFTLASVLSACGAVAA----LDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVAD 195
Query: 190 SFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHAR 249
+ +LFD + N +S+ M G A + D AL LF RM
Sbjct: 196 AVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMS-------------------- 235
Query: 250 CGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD-LAADH-------MGKVIHGFVIKG 301
+ I V A++ VL CA A D+ + + IH V++
Sbjct: 236 ---------------RSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRK 280
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
GF+ V N+LI +Y K + A +F + +IVSWN L+T Y + G + A+EV
Sbjct: 281 GFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVL 340
Query: 362 --------------------SQLEKLDGGS-------MERPNVISWSAVIGAFASNGRGE 394
S ++ D S + +P+V +W+ ++ + +
Sbjct: 341 DLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQ 400
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
+ ++LFR+MQ V + T++ +LS C+ L +G+++H V++ ++ ++ V +GL+
Sbjct: 401 DTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLI 460
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY KCG + ++F + ++D++ WNSMISG ++ L E A F++M E G P
Sbjct: 461 DMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTES 520
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
++ +++++C+ + +GR+I ++++ + + + ++D+ + G + +A
Sbjct: 521 SYASMINSCARLSSIPQGRQIHAQVLKD-GYDQNVYVGSSLIDMYAKCGNMDDA 573
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 208/433 (48%), Gaps = 43/433 (9%)
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
VL G + ++N L+ +Y+ G + + F + N S+N S D A
Sbjct: 36 VLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAA 95
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
+L RM + N V+W +++++ AR E ++++ M + G+ +A VLS
Sbjct: 96 RDLLGRMP----DRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSA 151
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
C +AA G+ HG +K G + FV+N L+ +Y K G V A LF + N VS+
Sbjct: 152 CGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSF 211
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
A++ A++G D+A+ +F+++ + S R + ++ S+V+GA A G+ ++ R
Sbjct: 212 TAMMGGLAQSGAVDDALRLFARMSR----SAIRVDPVAVSSVLGACAQACAGD--YNVAR 265
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
++LA+ IH VVR + + V N L++MY K
Sbjct: 266 AIRLAQ-------------------------SIHALVVRKGFDSDQHVGNSLIDMYAKGM 300
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
++E VFE + +++WN +++GYG G E AL + M E+GF+P+ V + +L+
Sbjct: 301 KMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLA 360
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP---ME 578
+C A V R +FD + + P + + ++ G+ L Q+ ++ + M ++
Sbjct: 361 SCIKARDVPSARAMFDKISK-----PSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQ 415
Query: 579 PNAYVWGTLLNSC 591
P+ +L++C
Sbjct: 416 PDRTTLAVILSTC 428
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 157/351 (44%), Gaps = 49/351 (13%)
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
V+ G F+ N L+ +Y G A F + N+ S+NA I++ AG A
Sbjct: 36 VLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAA 95
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
++ G M N +SW+ VI A A + EAL+++R M + + T++
Sbjct: 96 RDLL--------GRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLAS 147
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
+LS C AAL+ GR HG V+V ++ N V+NGLL MY KCG + + +F+ + +
Sbjct: 148 VLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPN 207
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS------------- 524
+++ +M+ G +G ++AL F M + + D VA +VL AC+
Sbjct: 208 EVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAI 267
Query: 525 ------HAGLVNE--------GRRIFDMMVREFRIEPQMEHYACM-----------VDLL 559
HA +V + G + DM + +++ M+ + M V
Sbjct: 268 RLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGY 327
Query: 560 GRAGLLQ---EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
G+ G + E D+++ EPN + +L SC ++ A AM +I
Sbjct: 328 GQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKI 378
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 276/484 (57%), Gaps = 13/484 (2%)
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
D +L++F R+E N W +++ ++ + E+ + L+ +M K + +V
Sbjct: 80 DYSLQIFDRIE----NSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLV 135
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
+ CA + GK IH V+K GF+ V+V+N LI +Y G+++ A+ LF E +
Sbjct: 136 VQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDS 195
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALD 398
VSWN+++ Y + G + +E + ++D M +SWSA+I + NG EEAL
Sbjct: 196 VSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDM-----VSWSALISGYEQNGMYEEALV 250
Query: 399 LFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL---- 454
+F +M + + V + +LS CA + + G+ IHG V+R+ + + +QN L+
Sbjct: 251 MFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYS 310
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MYMKCGC+E VF +E+K + +WN++I G +NGL E +L F EM G P+ +
Sbjct: 311 DMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEI 370
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F+ VL AC H GLV+EGR F M+ + IEP ++HY CMVDLLGRAGLL EA ++++
Sbjct: 371 TFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIES 430
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
MPM P+ WG LL +C+ H +T++ E + ++ L + G ++LLSNI+A+ G WED
Sbjct: 431 MPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDV 490
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
+VR K +G+ K G S IE +H F +G+ + V +L E+A +++ +G
Sbjct: 491 LEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYA 550
Query: 695 PDND 698
PD +
Sbjct: 551 PDTN 554
Score = 202 bits (513), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 145/495 (29%), Positives = 244/495 (49%), Gaps = 63/495 (12%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVL--SIYARFGRLFDARNVFETAPFDCKS 95
L C + Q ++ +Q+I+TG + F A+R+L S + F L + +F+ S
Sbjct: 36 LHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIE---NS 92
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ +WN+++R + + E AL LY M K V D +T+PLV++AC + R G
Sbjct: 93 NGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQAC----AVRLLEFGG 148
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ +H+HVL++GF +V++ N LI MYA G M D+ KLFD+ V + +SWN + +G+
Sbjct: 149 KEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKK 208
Query: 216 FDCDGALE---LFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
D +E LF M+ E + V+W++L+S + + G EE + +F M G+ +
Sbjct: 209 GDMGQVMEAWKLFNEMD----EKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDE 264
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG----KHGDVKVAQN 328
+ VLS CA L+ GK+IHG VI+ G E YV ++NALI +Y K G V+ A
Sbjct: 265 VVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALE 324
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+F+ +EEK + SWNALI A GL + ++++FS+++
Sbjct: 325 VFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMK----------------------- 361
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR-EIHGHVVRVSMNKNI 447
+NG V+ N +T G+L C ++ GR + + + N+
Sbjct: 362 NNG----------------VIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNV 405
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIE-KKDLITWNSMISGYGMNGLGENALATFEEMIE 506
++++ + G L E + E + D+ TW +++ +G E ++IE
Sbjct: 406 KHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIE 465
Query: 507 AGFKPDGVAFVAVLS 521
+PD F +LS
Sbjct: 466 --LQPDHDGFHVLLS 478
>gi|242045336|ref|XP_002460539.1| hypothetical protein SORBIDRAFT_02g030160 [Sorghum bicolor]
gi|241923916|gb|EER97060.1| hypothetical protein SORBIDRAFT_02g030160 [Sorghum bicolor]
Length = 630
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 194/606 (32%), Positives = 315/606 (51%), Gaps = 29/606 (4%)
Query: 67 ARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL 126
+R+ S+ R G AR VF+ P + ++ WN++L G +AL L+ +
Sbjct: 16 SRIASL-GRAGDAASARAVFDAMP---RRDAVAWNAMLTAYARAGQPRDALALFSRAPA- 70
Query: 127 GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ 186
D F+ + A + + G +H +L++G + + + N LI MYAK +
Sbjct: 71 ---PDAFS----LTAALSAAAALRSPTAGAQLHARLLRVGLRALLPVGNSLISMYAKCAR 123
Query: 187 MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS 246
D+ + F ++R +N +SW + + + D A ELF M N V W +LL
Sbjct: 124 AEDAARAFGEMRERNALSWCSLLDAYVASDDLRLAQELFDEMP----NRNNVAWNTLLMG 179
Query: 247 HARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY 306
++R G + LF+ MR G+ + +++ C +LA G IH V++ G+
Sbjct: 180 YSRSGNANHCLLLFNKMRMAGLTCDDATLCILVDACTELANPSAGSAIHKIVVQSGWNAM 239
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK 366
V N+LI +Y K + A +F +E + IVSWN+LI +Y + G ++A +F
Sbjct: 240 AEVSNSLISLYTKFSLLDDAVRIFESMEVQTIVSWNSLIDAYMKLGCVEKATSLF----- 294
Query: 367 LDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV-ANSVTISGLLSVCAES 425
GS+ NVISW+A+IG A NG +EAL LF +M + + + T +L CA +
Sbjct: 295 ---GSVPETNVISWTAMIGGLARNGLADEALILFVEMLAHEHIHPDDFTFGAVLHACATA 351
Query: 426 AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMI 485
A+L GR +H V + + V N L++MY KCG LE G VF I KDL++WN+M+
Sbjct: 352 ASLASGRMVHCRVFQSGFVSYLYVANSLIDMYAKCGDLEGGTNVFSTIVNKDLVSWNTML 411
Query: 486 SGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRI 545
G+ +NGL AL ++ M PD V F +L+ACSH+GL+ G+ F++MV I
Sbjct: 412 FGFAINGLPNEALVVYDSMKSHDVCPDEVTFTGLLTACSHSGLLEHGKTFFELMVSVHGI 471
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIV---KNMPMEPNAYVWGTLLNSCRM-HKNTDVAE 601
+P+ EH +C++D+ R+G + +A +++ M N+ + LL++C + H N VA
Sbjct: 472 QPKPEHLSCILDMYARSGNITKAMEMLDRYSEMIQTHNSDIREALLSACSLEHLNFSVAR 531
Query: 602 AMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKI 661
+ + Y++LSN++ A+G+W A +VRI+ G+KK G SWIEV+ +
Sbjct: 532 KAVKDMVATKSAGDVGYVMLSNLFCATGQWNQAERVRIAMAEYGIKKSPGCSWIEVQGAV 591
Query: 662 HMFSSG 667
+F SG
Sbjct: 592 KVFVSG 597
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 128/264 (48%), Gaps = 34/264 (12%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC---------------- 93
+H ++ +G NA A ++ ++S+Y +F L DA +FE+
Sbjct: 227 IHKIVVQSGWNAMAEVSNSLISLYTKFSLLDDAVRIFESMEVQTIVSWNSLIDAYMKLGC 286
Query: 94 --KSSSLL----------WNSILRVNVSNGLYENALKLYVKM-RKLGVLGDGFTFPLVIR 140
K++SL W +++ NGL + AL L+V+M + D FTF V+
Sbjct: 287 VEKATSLFGSVPETNVISWTAMIGGLARNGLADEALILFVEMLAHEHIHPDDFTFGAVLH 346
Query: 141 ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
AC S + G++VH V Q GF +++ N LI MYAK G + +F + K
Sbjct: 347 ACATAAS----LASGRMVHCRVFQSGFVSYLYVANSLIDMYAKCGDLEGGTNVFSTIVNK 402
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
+ +SWN M GFA+N + AL ++ M+ + P+ VT+T LL++ + G LE F
Sbjct: 403 DLVSWNTMLFGFAINGLPNEALVVYDSMKSHDVCPDEVTFTGLLTACSHSGLLEHGKTFF 462
Query: 261 DMMRK-RGIEVGAEAIAVVLSVCA 283
++M GI+ E ++ +L + A
Sbjct: 463 ELMVSVHGIQPKPEHLSCILDMYA 486
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L C T L + VH ++ +G + ++A ++ +YA+ G L NVF T
Sbjct: 341 FGAVLHACATAASLASGRMVHCRVFQSGFVSYLYVANSLIDMYAKCGDLEGGTNVFSTI- 399
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ WN++L NGL AL +Y M+ V D TF ++ AC G
Sbjct: 400 --VNKDLVSWNTMLFGFAINGLPNEALVVYDSMKSHDVCPDEVTFTGLLTACSHSGLLEH 457
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
+F +++ V G Q ++ ++ MYA+ G ++ + ++ D+
Sbjct: 458 GKTFFELM---VSVHGIQPKPEHLSCILDMYARSGNITKAMEMLDR 500
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 162/465 (34%), Positives = 278/465 (59%), Gaps = 12/465 (2%)
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
PN + +L+ + RL+E+ + + +MRK G+ + + C +G+ I
Sbjct: 109 PNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQI 168
Query: 295 HG-FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
HG ++ GGF + + V N++I +Y K G ++ + +F E+ ++++SW LI++Y ++G
Sbjct: 169 HGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGN 228
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
+ A E+F L D +++W+ ++ FA N + EA+ F KMQ V + +
Sbjct: 229 MESAGELFDGLPVKD--------MVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEI 280
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSM--NKNILVQNGLLNMYMKCGCLEEGHLVFE 471
T+ G++S CA+ A I + +++V + L++MY KCG + + + VF+
Sbjct: 281 TLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQ 340
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
++++++ +++SMI G+ M+G +A+ F+EM++ KP+ V F+ VL+ACSHAG+V +
Sbjct: 341 GMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQ 400
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
G +IF++M + + I+P +HY CMVDLLGRAG LQEA ++VK MP+EP+ VWG LL +C
Sbjct: 401 GWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGAC 460
Query: 592 RMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
R+HK+ D+A A+ +F L G+Y+LL+NIYA+ GRW D + VR +T+GL+K
Sbjct: 461 RIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPA 520
Query: 652 QSWIEVKRK-IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
SWIE ++ +H F SG+ + + LE+L ++E KG P
Sbjct: 521 FSWIESEKGMVHEFFSGDMTHPRSGEIKQALEDLLDRLEAKGYQP 565
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 218/496 (43%), Gaps = 65/496 (13%)
Query: 11 QFSPSNPSRPFSIITYNNSLLDCFDH----LLQQCKTIHQLKQVHNQLIVTGANASAFLA 66
QF P NP +P + L CK + Q+KQVH ++++ G + S ++
Sbjct: 23 QF-PQNPQKPTPFYQIQQQQPKQLESQIVTTLDGCKNLTQIKQVHARILLNGLDQSCYVL 81
Query: 67 ARVLSIYARFGRLFDAR--NVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
A+++ + D ++F + + L+N+++R + + + + Y MR
Sbjct: 82 AKLIRTLTKLNIPVDPYPLSIFNQVNY---PNPFLYNALIRGYLIEERLKESTEFYSLMR 138
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH-VLQMGFQGNVHIVN-------- 175
K GV+ FTF + +AC + G+ +H +L GF ++H+ N
Sbjct: 139 KEGVVPVSFTFTALFKAC----GAKMDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIK 194
Query: 176 -----------------------ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
ELI Y K G M + +LFD + VK+ ++W +M SGF
Sbjct: 195 CGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTVMVSGF 254
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
A N A+ F++M+ G+E + +T ++S+ A+ G + + D+ K E G
Sbjct: 255 AQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKS--EFGG 312
Query: 273 EAIAVVLSVCADLAADHMGKVIHGF-VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
+ VV S D+ + G V + V +G E V+ +++I + HG V A LF
Sbjct: 313 KHSVVVGSALIDMYSK-CGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFD 371
Query: 332 EIEEKNI----VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
E+ + I V++ ++T+ + AG+ ++ ++F +EK G +P+ ++ ++
Sbjct: 372 EMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYG---IKPSADHYTCMVDLL 428
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
GR +EA +L + M + + LL C + +I H+ + +
Sbjct: 429 GRAGRLQEAHELVKTMPIE---PHGGVWGALLGACRIHKSPDIAAIAANHLFEL---EPY 482
Query: 448 LVQNGLL--NMYMKCG 461
+ N +L N+Y CG
Sbjct: 483 CIGNYILLANIYASCG 498
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 171/507 (33%), Positives = 280/507 (55%), Gaps = 28/507 (5%)
Query: 216 FDCDGALELFKRMEL--EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGIEVGA 272
F C A +L + E P+ W +++ ++ +E+M LF MR + I + +
Sbjct: 46 FACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDS 105
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
++++V+ C L G+ +H V+K G +FV+ ALI +Y K GD+++A+N+ E
Sbjct: 106 YSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDE 165
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQL------------------------EKLD 368
+ ++V +N L+ Y G + A ++F ++ +KL
Sbjct: 166 MAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLF 225
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
+ ER ++ISWS++I A+A + EAL LF +MQLA V+ + VT+ +LS C + AL
Sbjct: 226 DRTCER-DLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGAL 284
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+G+ IH + R + ++ + L++MY KCG ++ VF + +D+ W++MI G
Sbjct: 285 GMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGL 344
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
+G GE AL F +MI KP+ V F+ VLSACSH GLV+EG F M + + + P+
Sbjct: 345 ANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPK 404
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
+EHY C+VD+LGRAG LQEA +++K+MP P+A VW LL +CR++KN ++AE +
Sbjct: 405 IEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLL 464
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L G+Y+LLSNIY+ + W+ VR K ++KV G S IEV +H F +G+
Sbjct: 465 ELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGD 524
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVP 695
+ K + +L E+ +++ G P
Sbjct: 525 QSHPESKKILRMLSEITARLKANGYAP 551
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 198/402 (49%), Gaps = 50/402 (12%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLS-IYA--RFGRLFDARNVFETAPFDC 93
LLQ ++Q+ Q+H +I T + + F+ A++L ++A L AR+VF+ P
Sbjct: 9 LLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP--- 65
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLG-DGFTFPLVIRACKFMGSFRFRF 152
+ +WN+++R +++ + ++ L+ +MR + D ++ LVI+AC G +
Sbjct: 66 SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQAC---GRLKDPG 122
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAK----------------------------- 183
+ GQ +H VL++G ++ + LI MYAK
Sbjct: 123 N-GQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEY 181
Query: 184 --MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
+G+++ + LFD++ ++ +SWN M G A D A +LF R E + ++W+
Sbjct: 182 VRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRT----CERDLISWS 237
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
S+++++A+ + E + LF M+ + + VLS C D+ A MGK+IH + +
Sbjct: 238 SMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERN 297
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
E + + +L+ +Y K GD+ + +F+ + +++ +W+A+I A G + A++ F
Sbjct: 298 RIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHF 357
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
S++ D +PN +++ V+ A + G +E F M
Sbjct: 358 SKMISED----IKPNDVTFIGVLSACSHIGLVDEGWTYFTSM 395
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 98/193 (50%), Gaps = 7/193 (3%)
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
+A G + A+ +F+ C+ + W+S++ AL+L+ +M+ VL D
Sbjct: 212 HASLGDVGTAKKLFDRT---CERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDK 268
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
T V+ AC +G+ G+++H + + + ++ + L+ MYAK G + +S +
Sbjct: 269 VTMVSVLSACGDVGAL----GMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLR 324
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+F+ + ++ +W+ M G A + + AL+ F +M E ++PN VT+ +LS+ + G
Sbjct: 325 VFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGL 384
Query: 253 LEETMDLFDMMRK 265
++E F M K
Sbjct: 385 VDEGWTYFTSMSK 397
>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Brachypodium distachyon]
Length = 814
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 192/636 (30%), Positives = 314/636 (49%), Gaps = 82/636 (12%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+L Y + G L AR VF+ P S+ +N+++ G + AL L+ MR+ G+
Sbjct: 181 LLDAYCKHGLLAAARRVFQEMP---HRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGL 237
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
FTF V+ +G G+ VH V + NV + N L+ Y+K +
Sbjct: 238 AATRFTFSTVLTVATGVGDL----CLGRQVHGLVAR-ATSSNVFVNNSLLDFYSKCDCLD 292
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ KLF ++ ++ +S+N+M +G+A N
Sbjct: 293 EMKKLFHEMIERDNVSYNVMIAGYAWN--------------------------------- 319
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
RC + + LF M+ + A A +LSV + +GK IH
Sbjct: 320 RCASI--VLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIH------------- 364
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
AQ + + +++V NALI Y++ G+ D A F
Sbjct: 365 -----------------AQLVLLGLSSEDLVG-NALIDMYSKCGMLDAAKTNFINKNDKT 406
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
G +SW+A+I NG+ EEAL LF M+ A + + T S + + A +
Sbjct: 407 G--------VSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMI 458
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
+GR++H +++R ++ + LL+MY KCGCL+E F+++ +++ I+WN++IS Y
Sbjct: 459 GLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAY 518
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
G +NA+ FE M+ GFKPD V F++VLSACSH GL E + F++M E+ I P
Sbjct: 519 AHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPW 578
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
EHY+C++D LGR G + +++ MP E + +W ++L+SCR H N D+A A ++F
Sbjct: 579 KEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLF 638
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
+ + Y++LSNI+A +G+WEDAA V+ + +GL+K G SW+EVK K++ FSS +
Sbjct: 639 SMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRDRGLRKETGYSWVEVKHKVYSFSSND 698
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
+ + + LE L +M+ +G PD L ++
Sbjct: 699 QTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQQV 734
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 190/438 (43%), Gaps = 53/438 (12%)
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN-YISWNMMFSGFALNFDCDG 220
+++ GF + +N L+ G+++ + LFD++ +N S N M SG++ +
Sbjct: 25 MVKTGFDPATYRLNLLLHSLISSGRLAQARALFDQMPHRNNAFSLNRMLSGYSRSGQLSA 84
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARC--GRLEETMDLFDMMRKRGIEVGAEAIAVV 278
A LF + + VTWT ++ + A R + + LF M + G+ +A V
Sbjct: 85 AHHLF--LSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTVATV 142
Query: 279 LSV---CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
L++ AA + +H F +K G +
Sbjct: 143 LNLPPASGGTAAAIIIASLHPFALKLG------------------------------LLH 172
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
N+V N L+ +Y + GL A VF ++ D ++++A++ + G E
Sbjct: 173 SNVVVCNTLLDAYCKHGLLAAARRVFQEMPHRDS--------VTYNAMMMGCSKEGSHAE 224
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
ALDLF M+ + A T S +L+V L +GR++HG V R + + N+ V N LL+
Sbjct: 225 ALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARAT-SSNVFVNNSLLD 283
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
Y KC CL+E +F ++ ++D +++N MI+GY N L F EM F +
Sbjct: 284 FYSKCDCLDEMKKLFHEMIERDNVSYNVMIAGYAWNRCASIVLRLFREMQSLSFDRQALP 343
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD--IVK 573
+ ++LS + G++I +V + A ++D+ + G+L A I K
Sbjct: 344 YASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDLVGNA-LIDMYSKCGMLDAAKTNFINK 402
Query: 574 NMPMEPNAYVWGTLLNSC 591
N + W ++ C
Sbjct: 403 N---DKTGVSWTAMITGC 417
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 160/323 (49%), Gaps = 26/323 (8%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H QL++ G ++ + ++ +Y++ G L A+ F + + W +++
Sbjct: 361 KQIHAQLVLLGLSSEDLVGNALIDMYSKCGMLDAAKTNFINKN---DKTGVSWTAMITGC 417
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
V NG E AL+L+ MR+ G+ D TF I+A + G+ +H+++++ G
Sbjct: 418 VQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLA----MIGLGRQLHSYLIRSGH 473
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+V + L+ MY K G + ++ + FD++ +N ISWN + S +A A+++F+
Sbjct: 474 MSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEG 533
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGIEVGAEAIAVVLSVCADLA 286
M G +P+ VT+ S+LS+ + G EE M F++M + GI E + V+
Sbjct: 534 MLCYGFKPDSVTFLSVLSACSHNGLAEECMKYFELMEYEYGISPWKEHYSCVI------- 586
Query: 287 ADHMGKV-----IHGFVIKGGFEDYVFVKNALICVYGKHGDVKV----AQNLFSEIEEKN 337
D +G+V + + + FED + ++++ HG+ + A+ LFS + +
Sbjct: 587 -DTLGRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCRTHGNQDLARVAAEKLFS-MGSTD 644
Query: 338 IVSWNALITSYAEAGLCDEAVEV 360
+ L +A+AG ++A V
Sbjct: 645 ATPYVILSNIFAKAGKWEDAAGV 667
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 157/357 (43%), Gaps = 47/357 (13%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+QVH L+ +++ F+ +L Y++ L + + +F + ++ +N ++
Sbjct: 261 RQVHG-LVARATSSNVFVNNSLLDFYSKCDCLDEMKKLFHEM---IERDNVSYNVMIAGY 316
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
N L+L+ +M+ L + ++ GS G+ +H ++ +G
Sbjct: 317 AWNRCASIVLRLFREMQSLSFDRQALPYASLLSVA---GSVP-HIGIGKQIHAQLVLLGL 372
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ N LI MY+K G + + F K +SW M +G N + AL+LF
Sbjct: 373 SSEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCG 432
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M GL P+ T++S + ++LA
Sbjct: 433 MRRAGLSPDRATFSS-----------------------------------TIKASSNLAM 457
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+G+ +H ++I+ G VF +AL+ +Y K G + A F E+ E+N +SWNA+I++
Sbjct: 458 IGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCLDEALQTFDEMPERNSISWNAVISA 517
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
YA G A+++F + L G +P+ +++ +V+ A + NG EE + F M+
Sbjct: 518 YAHYGQAKNAIKMFEGM--LCYGF--KPDSVTFLSVLSACSHNGLAEECMKYFELME 570
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 174/493 (35%), Positives = 279/493 (56%), Gaps = 26/493 (5%)
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFD--MMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
PN + +LL + ++ T+ F+ ++ VL CA LA G+
Sbjct: 88 PNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQ 147
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
+H FV K G E +FV+N+L+ +Y K G +AQ LF E+ +++VSWN LI+ Y +G
Sbjct: 148 KVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSG 207
Query: 353 LCDEAVEVFS-QLEK--------LDG----GSMERP----------NVISWSAVIGAFAS 389
+ D+A VF +EK + G G++E NV+SW+A+I +A
Sbjct: 208 MVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQ 267
Query: 390 NGRGEEALDLFRKMQLAKVVA-NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
N + +A++LFR+MQ +A N VT+ +LS CA AL++G+ IH + R + +
Sbjct: 268 NEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLF 327
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
+ N L +MY KCGC+ E VF ++ ++D+I+W+ +I G M G A F EMIE G
Sbjct: 328 LGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDG 387
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+P+ ++F+ +L+AC+HAGLV++G FDMM + + I P++EHY C+VDLL RAG L +A
Sbjct: 388 LEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQA 447
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
++ +MPM+PN VWG LL CR++K+ + E + +I L + +GS + L+N+YA+
Sbjct: 448 ESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASM 507
Query: 629 GRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
GR +DAA R+ + K G SWIE+ ++ F G+S + ++ EL +M
Sbjct: 508 GRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIRELKWKM 567
Query: 689 ENKGCVPDNDIIL 701
+ G P D+++
Sbjct: 568 KVAGYKPKTDLVI 580
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/486 (25%), Positives = 224/486 (46%), Gaps = 67/486 (13%)
Query: 36 HLLQQCKT---IHQLKQVHNQLIVTGANA--SAFLAARVLSIYARFGRLFDARNVFETAP 90
HLL +C T + QL ++ Q+I + + +A + + + + G L + +F
Sbjct: 26 HLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNH-- 83
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL--GVLGDGFTFPLVIRACKFMGSF 148
F + +N++L+ + + + + L D +TF V++AC +
Sbjct: 84 FLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLA-- 141
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
+ GQ VH V + G + N+ + N L+ +Y K+G + KLFD++ V++ +SWN +
Sbjct: 142 --QVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTL 199
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
SG+ + D A +F M +E N V+W++++S +AR G LEE LF+ M R +
Sbjct: 200 ISGYCFSGMVDKARMVFDGM----MEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNV 255
Query: 269 -------------EVGAEAIAV-------------------VLSVCADLAADHMGKVIHG 296
E A+AI + VLS CA L A +GK IH
Sbjct: 256 VSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHR 315
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDE 356
F+ + E +F+ NAL +Y K G V A+ +F E+ E++++SW+ +I A G +E
Sbjct: 316 FIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANE 375
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
A F+++ ++ G PN IS+ ++ A G ++ L+ F M + +
Sbjct: 376 AFNFFAEM--IEDGL--EPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHY 431
Query: 417 G-LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
G ++ + + + L+ + + + M N++V LL GC +++ E+
Sbjct: 432 GCVVDLLSRAGRLDQAESL---INSMPMQPNVIVWGALLG-----GC-----RIYKDAER 478
Query: 476 KDLITW 481
+ + W
Sbjct: 479 GERVVW 484
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 151/320 (47%), Gaps = 20/320 (6%)
Query: 67 ARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL 126
+ ++S YAR G L +AR +FE P + + WN+++ N Y +A++L+ +M+
Sbjct: 228 STMISGYARVGNLEEARQLFENMPM---RNVVSWNAMIAGYAQNEKYADAIELFRQMQHE 284
Query: 127 GVLG-DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
G L + T V+ AC +G+ G+ +H + + + + + N L MYAK G
Sbjct: 285 GGLAPNDVTLVSVLSACAHLGAL----DLGKWIHRFIRRNKIEVGLFLGNALADMYAKCG 340
Query: 186 QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
+ ++ +F ++ ++ ISW+++ G A+ + A F M +GLEPN +++ LL+
Sbjct: 341 CVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLT 400
Query: 246 SHARCGRLEETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLAA-DHMGKVIHGFVIKGGF 303
+ G +++ ++ FDMM + GI E V+ + + D +I+ ++
Sbjct: 401 ACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPN- 459
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNL---FSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
V V AL+ + D + + + E++ + S L YA G D+A
Sbjct: 460 ---VIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASC 516
Query: 361 FSQLEKLDGGSMERPNVISW 380
+L D SM+ P SW
Sbjct: 517 --RLRMRDNKSMKTPGC-SW 533
>gi|224122888|ref|XP_002318941.1| predicted protein [Populus trichocarpa]
gi|222857317|gb|EEE94864.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 196/646 (30%), Positives = 330/646 (51%), Gaps = 85/646 (13%)
Query: 59 ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALK 118
A ++ LA +L Y G ARN+F+ P + + W +++ Y A
Sbjct: 40 AKGTSILATDLLKSYFERGLTSQARNLFDEMP---ERDVVAWTTMISGYTHCNEYTQAWS 96
Query: 119 LYVKMRKLG-VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF-QGNVHIVNE 176
++V M K G + FT V++ACK M R G++VH ++ F +G +++ N
Sbjct: 97 VFVDMVKNGNDPPNAFTISSVLKACKGMK----RVFCGRLVHGLAIKRRFMEGFIYVDNA 152
Query: 177 LIGMYAKMG-QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
L+ MYA G M D+ +F ++ E
Sbjct: 153 LMDMYASCGVGMRDACVVFHDIK-----------------------------------EK 177
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
N V+WT+L++ + G + +F M G+ + +I++ + CA + + + G+ IH
Sbjct: 178 NVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRACASIGSQNFGRQIH 237
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
VIK GFE + V N+++ +Y + G + A F+++ EK++++WN LI Y
Sbjct: 238 TAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNTLIAGY------- 290
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
ER + I E +F +M+ N T
Sbjct: 291 -----------------ERSDSI----------------EPFFIFSQMESEGFSPNCFTF 317
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
+ L++ CA +AAL G+++HG + R ++ N+ + N L++MY KCG + + F ++
Sbjct: 318 TSLVAACANAAALQCGQQVHGGIFRRGLDGNLELANALIDMYAKCGNIIDSQKNFSEMSC 377
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
+L++W SM+ GYG +G G+ A+ F+EM+ +G +PD V F+AVL ACSHAGLV++G R
Sbjct: 378 TNLVSWTSMMIGYGTHGYGKEAVELFDEMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRY 437
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
+ M+ ++ I+P E Y C+VDLLGR G +++A ++++MP + VWG LL +C+ H
Sbjct: 438 INCMINDYHIKPNQEIYGCVVDLLGRPGRVEDAYQLIRSMPFMADESVWGALLGACKAHN 497
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
+ + + A + L +Y++LSNIYAA G+W +AA++R K G +KVAG+SWI
Sbjct: 498 FSRLGKLAAKKALALRPNMVETYVMLSNIYAAEGKWGEAARMRKLMKRAGCRKVAGRSWI 557
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
EV+ +++ F GN + S + V EVLE M+ G VP+ D ++
Sbjct: 558 EVRNQVYSFVVGNKMGSHKEWVYEVLELPVQHMKEAGYVPEVDCLI 603
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 183/397 (46%), Gaps = 63/397 (15%)
Query: 188 SDSFKLFDKVRVKNYISW--NMMFSGFALNFDCDG----ALELFKRMELEGL-------- 233
+++F F + +KNY+ W N F+ G A +L K GL
Sbjct: 9 ANNFHPFPPM-MKNYLQWAQNTPTQKSGTPFNAKGTSILATDLLKSYFERGLTSQARNLF 67
Query: 234 ----EPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E + V WT+++S + C + +F DM++ A I+ VL C +
Sbjct: 68 DEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKNGNDPPNAFTISSVLKACKGMKRV 127
Query: 289 HMGKVIHGFVIKGGF-EDYVFVKNALICVYGKHG-DVKVAQNLFSEIEEKNIVSWNALIT 346
G+++HG IK F E +++V NAL+ +Y G ++ A +F +I+EKN+VSW LI
Sbjct: 128 FCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMRDACVVFHDIKEKNVVSWTTLIA 187
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
Y G + A+++ FR+M L
Sbjct: 188 GYTHRGNGNRALQI---------------------------------------FREMLLD 208
Query: 407 KVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
V N +IS + CA + N GR+IH V++ ++ V N +L+MY +CGCL E
Sbjct: 209 GVALNPHSISIAVRACASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEA 268
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHA 526
+ F + +KDLITWN++I+GY + E F +M GF P+ F ++++AC++A
Sbjct: 269 NKYFNDMTEKDLITWNTLIAGYERSDSIE-PFFIFSQMESEGFSPNCFTFTSLVAACANA 327
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
+ G+++ + R ++ +E ++D+ + G
Sbjct: 328 AALQCGQQVHGGIFRR-GLDGNLELANALIDMYAKCG 363
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 10/217 (4%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL-WNSILRV 106
+Q+H +I G + + +L +Y R G L +A F D L+ WN+++
Sbjct: 234 RQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFN----DMTEKDLITWNTLIAG 289
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
+ E ++ +M G + FTF ++ AC + + GQ VH + + G
Sbjct: 290 YERSDSIE-PFFIFSQMESEGFSPNCFTFTSLVAACANAAALQC----GQQVHGGIFRRG 344
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
GN+ + N LI MYAK G + DS K F ++ N +SW M G+ + A+ELF
Sbjct: 345 LDGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVELFD 404
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
M G+ P+ V + ++L + + G +++ + + M
Sbjct: 405 EMVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCM 441
>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 197/630 (31%), Positives = 305/630 (48%), Gaps = 86/630 (13%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +LQ+C L+ VH L+ N + ++LS+Y +FG + A +F+T P
Sbjct: 62 FSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMP 121
Query: 91 FDCKSSSLLWNSILRVNVSNGLYE--NALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
+ + +N+++ +V N Y+ + + LY KM+K V + TF +I AC + +
Sbjct: 122 ---RRDVVSFNTMISASVRNN-YDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIAL 177
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
R R I H H ++ G N + + L+ YAK ++ D+ K F+++
Sbjct: 178 RLR----GIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEI----------- 222
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+E + V+W ++ AR E + +F M K +
Sbjct: 223 ------------------------MELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKGNV 258
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
V + ++ C+ G HG IK G + NALI +Y K
Sbjct: 259 RVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYNALITMYSKC-------- 310
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
EK + S V++F GS+ PN+ISW+A+I F
Sbjct: 311 ------EKGVAS----------------PVKIF--------GSISEPNIISWTAMISGFM 340
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
N + EEA+ LF++M V N + S +L V A L G++IH +++ ++
Sbjct: 341 QNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFGLDLS 400
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
V N L++MY KCG LE+ HLVF ++ K D+++ +MI YG +G G+ AL EM G
Sbjct: 401 VNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMSYGQHGKGKEALEILAEMKSEG 460
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
PDGV F+ L ACSH GLV EG R+F +M+ + ++P+ EH+AC+VD+LGRAG L EA
Sbjct: 461 LVPDGVTFLGCLYACSHGGLVEEGVRVFKIMIEDHNLKPKREHFACVVDMLGRAGRLNEA 520
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
+ + M +E + VW TLL +CR+H + E A +I L G Y+LL+NIYA
Sbjct: 521 ENFIDEMGIESDVLVWETLLGACRVHGEMVLGEKSAQKIMELQPGRHGPYVLLANIYAER 580
Query: 629 GRWEDAAKVRISAKTKGLKKVAGQSWIEVK 658
G WED VR + GLKK G SW+ ++
Sbjct: 581 GSWEDKVMVREKLVSHGLKKQVGCSWVALE 610
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 201/696 (28%), Positives = 348/696 (50%), Gaps = 83/696 (11%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH+ G + +AF+ + ++ Y+ + DA +VF + +++W +++
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGI---VRKDAVVWTAMVSCYSE 240
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
N ENA +++ KMR G + F V++A + S G+ +H ++
Sbjct: 241 NDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSV----VLGKGIHGCAIKTLNDT 296
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
H+ L+ MYAK G + D+ F+ + + I + M S +A + + A ELF R+
Sbjct: 297 EPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLM 356
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
+ PN + +S VL C ++
Sbjct: 357 RSSVLPNEYSLSS-----------------------------------VLQACTNMVQLD 381
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
GK IH IK G E +FV NAL+ Y K D+
Sbjct: 382 FGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDM-------------------------- 415
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
D ++++FS S+ N +SW+ ++ F+ +G GEEAL +F +MQ A++
Sbjct: 416 -----DSSLKIFS--------SLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMP 462
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
VT S +L CA +A++ +IH + + + N + ++ N L++ Y KCG + + V
Sbjct: 463 CTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKV 522
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F+ + ++D+I+WN++ISGY ++G +AL F+ M ++ + + + FVA+LS CS GLV
Sbjct: 523 FQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLV 582
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
N G +FD M + I+P MEHY C+V LLGRAG L +A + ++P P+A VW LL+
Sbjct: 583 NHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLS 642
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
SC +HKN + A +I + + +Y+LLSN+YAA+G + A +R S + G++KV
Sbjct: 643 SCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKV 702
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKN 709
G SW+E+K +IH FS G+ D++ + +LE L L+ +G +PD +++L + + K+
Sbjct: 703 PGLSWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHD-VDKEQ 761
Query: 710 VKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRS 745
R+ + ++ + + +V +R+L +LRS
Sbjct: 762 KTRMLWVHSERLALAYGLV-MTPPGHPIRILKNLRS 796
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 168/358 (46%), Gaps = 46/358 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
K +H I T + + +L +YA+ G + DAR FE P+D LL I R
Sbjct: 283 KGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYD--DVILLSFMISRYA 340
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
SN E A +L++++ + VL + ++ V++AC M + FG+ +HNH +++G
Sbjct: 341 QSNQ-NEQAFELFLRLMRSSVLPNEYSLSSVLQACTNM----VQLDFGKQIHNHAIKIGH 395
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+ ++ + N L+ YAK M S K+F +R N +SWN + GF+ + + AL +F
Sbjct: 396 ESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCE 455
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M+ + VT++S VL CA A+
Sbjct: 456 MQAAQMPCTQVTYSS-----------------------------------VLRACASTAS 480
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
IH + K F + + N+LI Y K G ++ A +F + E++I+SWNA+I+
Sbjct: 481 IRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISG 540
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
YA G +A+E+F ++ K S N I++ A++ +S G L LF M++
Sbjct: 541 YALHGQAADALELFDRMNK----SNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRI 594
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 178/413 (43%), Gaps = 80/413 (19%)
Query: 131 DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHI--VNELIGMYAKMGQMS 188
D F ++ C G R G+ VH HV++ G G + + N L+ MY K+G ++
Sbjct: 58 DSFACARQLQGCIARGDARG----GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLA 113
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ +LFD++ +N +S+ + A D + A LF+R+ EG E N T++L
Sbjct: 114 SARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTML---- 169
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+L MD A LA +H K G + F
Sbjct: 170 ---KLAIAMD-----------------------AAGLAGG-----VHSCAWKLGHDHNAF 198
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V + LI Y V A+++F+ I K+ V W A+++ Y+E + A VFS++ ++
Sbjct: 199 VGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKM-RVS 257
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
G +PN + ++V+ A +VC S L
Sbjct: 258 GC---KPNPFALTSVLKA---------------------------------AVCLPSVVL 281
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
G+ IHG ++ + V LL+MY KCG +++ L FE I D+I + MIS Y
Sbjct: 282 --GKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRY 339
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
+ E A F ++ + P+ + +VL AC++ ++ G++I + ++
Sbjct: 340 AQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIK 392
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 167/360 (46%), Gaps = 28/360 (7%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+LQ C + QL KQ+HN I G + F+ ++ YA+ + + +F +
Sbjct: 370 VLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLR--- 426
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
++ + WN+I+ +GL E AL ++ +M+ + T+ V+RAC S R
Sbjct: 427 DANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHA-- 484
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
GQI H + + F + I N LI YAK G + D+ K+F + ++ ISWN + SG+A
Sbjct: 485 -GQI-HCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYA 542
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGIEVGA 272
L+ ALELF RM +E N +T+ +LLS + G + + LFD MR GI+
Sbjct: 543 LHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSM 602
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI--CVYGKHGDVKVAQNLF 330
E ++ + A + + F+ V AL+ C+ K+ VA F
Sbjct: 603 EHYTCIVRLLG--RAGRLNDALQ-FIGDIPSAPSAMVWRALLSSCIIHKN----VALGRF 655
Query: 331 S-----EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG 385
S EIE ++ ++ L YA AG D+ + + + G + P +SW + G
Sbjct: 656 SAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNI--GVRKVPG-LSWVEIKG 712
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 123/291 (42%), Gaps = 44/291 (15%)
Query: 291 GKVIHGFVIK-GGFEDY-VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
G+ +HG V++ GG +F N L+ +YGK G + A+ LF + E+N+
Sbjct: 78 GRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNM---------- 127
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+S+ ++ A A G E A LFR+++
Sbjct: 128 -----------------------------VSFVTLVQAHAQRGDFEAAAALFRRLRWEGH 158
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
N ++ +L + A + +H ++ + N V +GL++ Y C + +
Sbjct: 159 EVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEH 218
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
VF I +KD + W +M+S Y N ENA F +M +G KP+ A +VL A
Sbjct: 219 VFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPS 278
Query: 529 VNEGRRIFDMMVREFR-IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
V G+ I ++ EP + ++D+ + G +++A + +P +
Sbjct: 279 VVLGKGIHGCAIKTLNDTEPHVG--GALLDMYAKCGDIKDARLAFEMIPYD 327
>gi|297607983|ref|NP_001061009.2| Os08g0153600 [Oryza sativa Japonica Group]
gi|255678154|dbj|BAF22923.2| Os08g0153600 [Oryza sativa Japonica Group]
Length = 551
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 179/551 (32%), Positives = 300/551 (54%), Gaps = 54/551 (9%)
Query: 175 NELIGMYAK-MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL 233
N L+ YA+ +G+++D+ LFD++ + +S+N + S + D DGA LF M +
Sbjct: 52 NCLLAGYARALGRLADARHLFDRIPTPDAVSYNTLLSCHFASGDADGARRLFASMPVR-- 109
Query: 234 EPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
+ V+W +++S ++ G +EE +F M R
Sbjct: 110 --DVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRN-------------------------- 141
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK-NIVSWNALITSYAEAG 352
NA++ + D+ A+ F EK + V W A+++ Y + G
Sbjct: 142 -------------SVSWNAMVSGFACSRDMSAAEEWFRNAPEKGDAVLWTAMVSGYMDIG 188
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM-QLAKVVAN 411
+A+E F +M N++SW+AV+ + N ++AL LFR M + A V N
Sbjct: 189 NVVKAIEYFE--------AMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPN 240
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
+ T+S +L C+ +AL G++IH +++ +++N+ V L++MY KCG L +F
Sbjct: 241 ASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFG 300
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
++ +D++ WN+MISGY +G G+ A+ FE M + G +P+ + FVAVL+AC H GL +
Sbjct: 301 EMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDF 360
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
G R F+ M + IEP+++HY+CMVDLL RAG L+ A D++++MP EP+ +GTLL +C
Sbjct: 361 GIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAAC 420
Query: 592 RMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAG 651
R++KN + AE A ++ ++ G+Y+ L+NIYA + +W+D ++VR K + K G
Sbjct: 421 RVYKNLEFAELAAGKLIEKDPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPG 480
Query: 652 QSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVK 711
SWIE+K +H F S + L L + E L +LA +M+ G VPD D +L ++ V+
Sbjct: 481 YSWIEIKGVMHEFRSNDRLHPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQ 540
Query: 712 RIQRIRADNIK 722
+ R R N++
Sbjct: 541 MLMRHRPTNVQ 551
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 160/357 (44%), Gaps = 62/357 (17%)
Query: 69 VLSIYAR-FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG 127
+L+ YAR GRL DAR++F+ P ++ +N++L + ++G + A +L+ M
Sbjct: 54 LLAGYARALGRLADARHLFDRIP---TPDAVSYNTLLSCHFASGDADGARRLFASMPVRD 110
Query: 128 VLG-----DGFTFPLVIRACK--FMG-SFRFRFSFGQIVHNHVLQMGF------------ 167
V+ G + + K F+ R S+ +V
Sbjct: 111 VVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPE 170
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+G+ + ++ Y +G + + + F+ + V+N +SWN + +G+ N D AL LF+
Sbjct: 171 KGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRT 230
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
M +R+ ++ A ++ VL C++L+A
Sbjct: 231 M----------------------------------VREANVQPNASTLSSVLLGCSNLSA 256
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
GK IH + +K + V +L+ +Y K GD+ A LF E+ +++V+WNA+I+
Sbjct: 257 LGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISG 316
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
YA+ G EA+ +F +++ D G PN I++ AV+ A G + + F MQ
Sbjct: 317 YAQHGDGKEAINLFERMK--DEGV--EPNWITFVAVLTACIHTGLCDFGIRCFEGMQ 369
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 111/209 (53%), Gaps = 9/209 (4%)
Query: 63 AFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVK 122
A L ++S Y G + A FE P + + WN+++ V N ++AL+L+
Sbjct: 174 AVLWTAMVSGYMDIGNVVKAIEYFEAMPV---RNLVSWNAVVAGYVKNSHADDALRLFRT 230
Query: 123 M-RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
M R+ V + T V+ C + + FG+ +H +++ N+ + L+ MY
Sbjct: 231 MVREANVQPNASTLSSVLLGCSNLSAL----GFGKQIHQWCMKLPLSRNLTVGTSLVSMY 286
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
K G +S + KLF ++ ++ ++WN M SG+A + D A+ LF+RM+ EG+EPN++T+
Sbjct: 287 CKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFV 346
Query: 242 SLLSSHARCGRLEETMDLFDMMRK-RGIE 269
++L++ G + + F+ M++ GIE
Sbjct: 347 AVLTACIHTGLCDFGIRCFEGMQELYGIE 375
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 275/490 (56%), Gaps = 22/490 (4%)
Query: 209 FSGFALNFDCDGALE--LFKRMELEGLE-PNFVTWTSLLSSHARCGRLEETMDLF-DMMR 264
F F L C AL + R + +E PN +T++++++A + L+ +M+R
Sbjct: 88 FYAFKLLRFCTLALSNLSYARFIFDHVESPNVYLYTAMITAYASHSDHTSALLLYRNMVR 147
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH-GDV 323
+R VL C + +++H V++ GFE Y V+ AL+ Y + DV
Sbjct: 148 RRRPWPNHFIYPHVLKSCTQVVGPGSARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDV 207
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
+ A+ LF E+ E+N+VSW A+I+ Y G AV +F ++ + D V SW+A+
Sbjct: 208 ESARLLFDEMTERNVVSWTAMISGYTRLGQIGNAVLLFEEMPERD--------VPSWNAL 259
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVA-------NSVTISGLLSVCAESAALNIGREIHG 436
I + NG EAL LFR+M + A N VT LS C + L +G+ IHG
Sbjct: 260 IAGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRPNQVTAVCSLSACGHTGMLRLGKWIHG 319
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
+V R + + V N L++MY KCGCL+E VF++ ++ L +WNSMI+ ++G +N
Sbjct: 320 YVYRNGLGLDSFVSNALVDMYGKCGCLKEARRVFDRTLERSLTSWNSMINCLALHGQSQN 379
Query: 497 ALATFEEMIE--AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
A++ FEEM+ +G KPD V F+ +L+AC+H GLV +G F++M + + IEPQ+EHY C
Sbjct: 380 AISVFEEMMTCGSGVKPDEVTFIGLLNACTHGGLVEKGWLYFELMTQNYGIEPQIEHYGC 439
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
+VDLLGRAG +EA ++V+ M +EP+ +WG+LLN C++H +TD+AE ++ +
Sbjct: 440 LVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNGCKIHGHTDLAEFSIKKLIDMDPNN 499
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
G ++L+NIY G+W++ KVR K + K G SWIE+ ++H F S +
Sbjct: 500 GGYGIMLANIYGELGKWDEVRKVRKVLKEQNAHKTPGCSWIEIDNQVHQFYSVDKTHPRT 559
Query: 675 KNVCEVLEEL 684
+ + LE L
Sbjct: 560 EEIYNTLESL 569
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 130/529 (24%), Positives = 216/529 (40%), Gaps = 122/529 (23%)
Query: 16 NPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSI--- 72
N + P + + NNS+L LL++C ++ LKQ+ LI G + F A ++L
Sbjct: 44 NMAPPQNQLNLNNSVLA----LLERCIHLNHLKQLQAFLITLGHAQTHFYAFKLLRFCTL 99
Query: 73 ------YARFGRLFD---ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM 123
YARF +FD + NV+ L+ +++ S+ + +AL LY M
Sbjct: 100 ALSNLSYARF--IFDHVESPNVY------------LYTAMITAYASHSDHTSALLLYRNM 145
Query: 124 -RKLGVLGDGFTFPLVIRAC-KFMGSFRFRFSFGQIVHNHVLQMGFQG------------ 169
R+ + F +P V+++C + +G R +VH VL+ GF+
Sbjct: 146 VRRRRPWPNHFIYPHVLKSCTQVVGPGSAR-----MVHCQVLRSGFEQYPVVQTALLDAY 200
Query: 170 --------------------NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
NV +I Y ++GQ+ ++ LF+++ ++ SWN +
Sbjct: 201 LRFWSDVESARLLFDEMTERNVVSWTAMISGYTRLGQIGNAVLLFEEMPERDVPSWNALI 260
Query: 210 SGFALNFDCDGALELFKRMEL-------EGLEPNFVTWTSLLSSHARCGRLEETMDLFDM 262
+G+ N AL LF+RM +G PN VT A C
Sbjct: 261 AGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRPNQVT--------AVCS----------- 301
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
LS C +GK IHG+V + G FV NAL+ +YGK G
Sbjct: 302 ----------------LSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGC 345
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
+K A+ +F E+++ SWN++I A G A+ VF E + GS +P+ +++
Sbjct: 346 LKEARRVFDRTLERSLTSWNSMINCLALHGQSQNAISVFE--EMMTCGSGVKPDEVTFIG 403
Query: 383 VIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG-LLSVCAESAALNIGREIHGHVVRV 441
++ A G E+ F M + + G L+ + + E+ V +
Sbjct: 404 LLNACTHGGLVEKGWLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEV---VRGM 460
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGM 490
+ + ++ LLN GC GH + K LI + GYG+
Sbjct: 461 RIEPDEVIWGSLLN-----GCKIHGHTDLAEFSIKKLIDMDPNNGGYGI 504
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 182/615 (29%), Positives = 304/615 (49%), Gaps = 88/615 (14%)
Query: 81 DARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIR 140
+A VF+ P + ++ +WN++ R N +++ + L+ +M+ L V+ + FTFP++++
Sbjct: 3 NAHKVFDQIP---EPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILK 59
Query: 141 ACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
+C + + + G+ VH V++ GF+ N + LI MYA G + ++++F ++ +
Sbjct: 60 SCVKINALKE----GEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIER 115
Query: 201 NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF 260
N I+W M +G+ D A LF E + V W +++S + + +LF
Sbjct: 116 NVIAWTAMINGYITCCDLVTARRLFDLAP----ERDIVLWNTMISGYIEAKDVIRARELF 171
Query: 261 DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
D M + V N ++ Y +
Sbjct: 172 DKMPNKD---------------------------------------VMSWNTVLNGYASN 192
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
GDV + LF E+ E+N+ SWNALI Y G E + F ++ +DG
Sbjct: 193 GDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRM-LVDG----------- 240
Query: 381 SAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR 440
VV N T+ +LS CA AL++G+ +H +
Sbjct: 241 --------------------------TVVPNDATLVNVLSACARLGALDLGKWVHVYAES 274
Query: 441 VSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALAT 500
N+ V+N L++MY KCG +E VF+ ++ KDLI+WN++I G ++G G +AL
Sbjct: 275 HGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNL 334
Query: 501 FEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLG 560
F M AG PDG+ F+ +L AC+H GLV +G F M ++ I P++EHY C+VDLLG
Sbjct: 335 FSHMKIAGENPDGITFIGILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLG 394
Query: 561 RAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML 620
RAGLL A D ++ MP+E +A +W LL +CR++KN ++AE ++ + +Y++
Sbjct: 395 RAGLLAHAVDFIRKMPIEADAVIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVM 454
Query: 621 LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEV 680
LSNIY GRW+D A+++++ + G KK+ G S IEV + F S + + + +
Sbjct: 455 LSNIYGDFGRWKDVARLKVAMRDTGFKKLPGCSLIEVNDYLVEFYSLDERHPEKEQIYGT 514
Query: 681 LEELALQMENKGCVP 695
L L + + G VP
Sbjct: 515 LRTLTKLLRSSGYVP 529
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 8/196 (4%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG- 127
VL+ YA G + +FE P + + WN+++ NG + L + +M G
Sbjct: 185 VLNGYASNGDVMACERLFEEMP---ERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGT 241
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
V+ + T V+ AC +G+ G+ VH + G++GNV++ N L+ MYAK G +
Sbjct: 242 VVPNDATLVNVLSACARLGAL----DLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVV 297
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
+ +F + K+ ISWN + G A++ AL LF M++ G P+ +T+ +L +
Sbjct: 298 ETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCAC 357
Query: 248 ARCGRLEETMDLFDMM 263
G +E+ F M
Sbjct: 358 THMGLVEDGFSYFKSM 373
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 203/722 (28%), Positives = 336/722 (46%), Gaps = 119/722 (16%)
Query: 48 KQVHNQLIVTGANASAF-LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
KQ+H + G + + ++ +Y + + D R VFE K + + W S+L
Sbjct: 75 KQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGM---LKRNVVTWTSLLTG 131
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
+ G+ + + L+ +MR GV + FTF V+ G GQ VH ++ G
Sbjct: 132 YIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQG----MVDLGQHVHAQSIKFG 187
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
V + N L+ MYAK G L ++ RV +F
Sbjct: 188 CCSTVFVCNSLMNMYAKCG-------LVEEARV------------------------VFC 216
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
RME + V+W +L++ GR E + LF R + + V+++CA+L
Sbjct: 217 RMETR----DMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLK 272
Query: 287 ADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK--------------------------- 319
+ + +H V+K GF Y V AL+ Y K
Sbjct: 273 HLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMI 332
Query: 320 -----HGDVKVAQNLFSEIEEKNIVS---------------------------------- 340
+GD+ +A LFS + E +
Sbjct: 333 DGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTILTVSEASFPPQIHAQVIKTNYECTPT 392
Query: 341 -WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
AL+ SY++ +EA+ +F +++ D V+SWSA++ +A G A +
Sbjct: 393 VGTALMVSYSKLCSTEEALSIFKMIDQKD--------VVSWSAMLTCYAQAGDCNGATNA 444
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAA-LNIGREIHGHVVRVSMNKNILVQNGLLNMYM 458
F KM + + N TIS + CA AA +++GR+ H ++ + + V + L++MY
Sbjct: 445 FIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYA 504
Query: 459 KCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
+ G +E VFE+ +DL++WNSM+SGY +G + AL F +M G DG+ F++
Sbjct: 505 RKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLS 564
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
V+ C+HAGLV EG++ FD+MVR++ I P M+HYACMVDL RAG L E +++ MP
Sbjct: 565 VIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFP 624
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
+W LL +CR+HKN ++ + A ++ L + +Y+LLSNIY+A+G+W++ +VR
Sbjct: 625 AGPTIWRALLGACRVHKNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVR 684
Query: 639 ISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
TK ++K AG SWI++K K+H F + + + + L + +++ +G PD
Sbjct: 685 KLMDTKKVRKEAGCSWIQIKNKVHFFIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTS 744
Query: 699 II 700
+
Sbjct: 745 FV 746
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 173/374 (46%), Gaps = 41/374 (10%)
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV 293
P WT S+ + G + + +D F D R++G VG A+ ++ +C + +GK
Sbjct: 18 PTRTPWTMPFSTTWQ-GFVHQALDHFLDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQ 76
Query: 294 IHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGL 353
+H ++ G + HGD++V +L ++W++++
Sbjct: 77 LHALCVRCGHD---------------HGDIRVGTSLVD-----MYMNWHSVL-------- 108
Query: 354 CDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
+ +VF M + NV++W++++ + G + + LF +M+ V N
Sbjct: 109 --DGRKVFE--------GMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPF 158
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
T S +LS+ A +++G+ +H ++ + V N L+NMY KCG +EE +VF ++
Sbjct: 159 TFSSVLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRM 218
Query: 474 EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGR 533
E +D+++WN++++G +NG AL F + + + V++ C++ + R
Sbjct: 219 ETRDMVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLAR 278
Query: 534 RIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRM 593
++ +++ ++D +AG L +A D+ M N W +++ C
Sbjct: 279 QLHSSVLKH-GFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQ 337
Query: 594 HKNTDVAEAMASQI 607
+ + +A A+ S++
Sbjct: 338 NGDIPLAAALFSRM 351
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 209/757 (27%), Positives = 357/757 (47%), Gaps = 135/757 (17%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+L+ Y+ G + A +F+ P + WN+++ G+++ ++ L+V+M + GV
Sbjct: 89 MLTAYSHAGDISTAVALFDGMP---DPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGV 145
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D TF +++++C + S G VH ++ G + +V + L+ MY K +
Sbjct: 146 SPDRTTFAVLLKSCSALE----ELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL---EPNF-------- 237
D+ F + +N++SW +G N LELF M+ GL +P++
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 238 ------------------------VTWTSLLSSHARCGRLEETMDLFDMMRKRGIE---- 269
V T+++ +A+ L + F + +E
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321
Query: 270 ---------VGAEAIAV------------------VLSVCADLAADHMGKVIHGFVIKGG 302
+G EA+ + V S CA+ G+ +H IK G
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
F+ + V NA++ +YGK + A +F +++K+ VSWNA+I + + G D+ + F+
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 441
Query: 363 Q----------------------LEKLDGGSMERPNVIS---------WSAVIGAFASNG 391
+ L L+ G M VI S V+ + G
Sbjct: 442 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCG 501
Query: 392 RGEEALDLFRKMQLAKVVANSVTISG-------------------------------LLS 420
+EA L ++ +VV+ + +SG +L
Sbjct: 502 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 561
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
CA A + +G++IHG +++ M + + + L++MY KCG + + LVFE++EK+D ++
Sbjct: 562 TCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS 621
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WN+MI GY ++GLG AL FE M + P+ FVAVL ACSH GL ++G R F +M
Sbjct: 622 WNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMT 681
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
+++EPQ+EH+ACMVD+LGR+ QEA + +MP + +A +W TLL+ C++ ++ ++A
Sbjct: 682 THYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIA 741
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
E AS + L + + Y+LLSN+YA SG+W D ++ R K LKK G SWIEV+ +
Sbjct: 742 ELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSE 801
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
+H F G+ + E+L +L +M+ G PD+
Sbjct: 802 MHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDS 838
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 200/434 (46%), Gaps = 47/434 (10%)
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
GF N + N L+ MYA+ + + ++FD + ++ +SWN M + ++ D A+ LF
Sbjct: 47 GFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
M +P+ V+W +L+S + + G +E++DLF M +RG+ AV+L C+ L
Sbjct: 107 DGMP----DPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 162
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+G +H +K G E V +AL+ +YGK + A F + E+N VSW A I
Sbjct: 163 EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAI 222
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+ +E+F ++++L G +S + AF S
Sbjct: 223 AGCVQNEQYVRGLELFIEMQRLGLG-------VSQPSYASAFRS---------------- 259
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
CA + LN GR++H H ++ + + +V ++++Y K L +
Sbjct: 260 ----------------CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTD 303
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
F + + T N+M+ G GLG A+ F+ MI + + D V+ V SAC+
Sbjct: 304 ARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAE 363
Query: 526 AGLVNEGRRIFDMMVRE-FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
+G+++ + ++ F ++ + + ++DL G+ L EA I + M + ++ W
Sbjct: 364 TKGYFQGQQVHCLAIKSGFDVDICVNN--AVLDLYGKCKALMEAYLIFQGMK-QKDSVSW 420
Query: 585 GTLLNSCRMHKNTD 598
++ + + + D
Sbjct: 421 NAIIAALEQNGHYD 434
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 122/533 (22%), Positives = 223/533 (41%), Gaps = 104/533 (19%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
+ K Q +QVH I +G + + VL +Y + L +A +F+ + S+
Sbjct: 363 ETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK---QKDSVS 419
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN+I+ NG Y++ + + +M + G+ D FT+ V++AC + S + G +VH
Sbjct: 420 WNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEY----GLMVH 475
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+ V++ G + + + ++ MY K G + ++ KL D++ + +SWN
Sbjct: 476 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWN------------- 522
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
++LS + EE F M G++ A VL
Sbjct: 523 ----------------------AILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVL 560
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
CA+LA +GK IHG +IK D ++ + L+ +Y K GD+ + +F ++E+++ V
Sbjct: 561 DTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFV 620
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEK----------------------LDGGSME---- 373
SWNA+I YA GL EA+ +F +++K D G
Sbjct: 621 SWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLM 680
Query: 374 ------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
P + ++ ++ + +EA+ M A++V LLS+C
Sbjct: 681 TTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQ---ADAVIWKTLLSICKIRQD 737
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG----------CLEEGHLVFEQIEKKD 477
+ I +V+ + + + V L N+Y + G L++G L +K+
Sbjct: 738 VEIAELAASNVLLLDPDDSS-VYILLSNVYAESGKWADVSRTRRLLKQGRL-----KKEP 791
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIE-----------AGFKPDGVAFVAV 519
+W + S +G+ A E+ E +G++PD +FV V
Sbjct: 792 GCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEV 844
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ +L+ C + L+ VH+++I +G + AF+A+ V+ +Y + G + +A+ + +
Sbjct: 455 YGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG 514
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ WN+IL N E A K + +M +G+ D FTF V+ C + +
Sbjct: 515 ---GQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIEL 571
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H +++ + +I + L+ MYAK G M DS +F+KV ++++SWN M
Sbjct: 572 ----GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMIC 627
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
G+AL+ AL +F+RM+ E + PN T+ ++L + + G ++ F +M
Sbjct: 628 GYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLM 680
Score = 112 bits (281), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 134/279 (48%), Gaps = 9/279 (3%)
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
++ GF FV N L+ +Y + A+ +F + ++ VSWN ++T+Y+ AG A
Sbjct: 43 MVVSGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 102
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
V +F DG M P+V+SW+A++ + G +E++DLF +M V + T +
Sbjct: 103 VALF------DG--MPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAV 154
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
LL C+ L++G ++H V+ + ++ + L++MY KC L++ F + +++
Sbjct: 155 LLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERN 214
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
++W + I+G N L F EM G ++ + +C+ +N GR++
Sbjct: 215 WVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHA 274
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
++ + +VD+ +A L +A +P
Sbjct: 275 HAIKN-KFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 646
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 177/570 (31%), Positives = 296/570 (51%), Gaps = 50/570 (8%)
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLF 194
F + RAC+ + R +H G + N L+ YA +G ++ + +LF
Sbjct: 47 FSHLFRACRALRPLR-------QLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELF 99
Query: 195 DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE 254
+++ +N +SWN++F G+ N D GA +LF M E N TW ++++ G E
Sbjct: 100 ERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMP----ERNVATWNAMVAGLTNLGFDE 155
Query: 255 ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
E++ F MR+ G+ + V CA L G+ +H +V++ G + + V ++L
Sbjct: 156 ESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLA 215
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
+Y + G ++ + + + +IVS N +I +
Sbjct: 216 HMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQ------------------------ 251
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREI 434
NG E AL+ F M+ V A+ VT +S C++ AAL G++I
Sbjct: 252 ---------------NGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQI 296
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
HG V++ ++K + V L++MY +CGCL + VF D ++MIS YG +G G
Sbjct: 297 HGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHG 356
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
+ A+ F++M+ G +P V F+A+L ACSH+GL EG F++M + + ++P ++HY C
Sbjct: 357 QKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTC 416
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
+VDLLGR+G L EA ++ +MP+ P+ +W TLL++C+ KN D+AE +A ++ L
Sbjct: 417 VVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHD 476
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
+ SY+LLSNI A S RW D ++VR + + ++K G SW+E+K IH F +G+
Sbjct: 477 SASYVLLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQ 536
Query: 675 KNVCEVLEELALQMENKGCVPDNDIILWEM 704
K + E LEE+ ++ G PD ++L +M
Sbjct: 537 KEIDECLEEMMAKIRQCGYSPDMSMVLHDM 566
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 181/413 (43%), Gaps = 72/413 (17%)
Query: 19 RPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGR 78
RPF + ++++ F HL + C+ + L+Q+H +GA F A ++ YA G
Sbjct: 33 RPFRGVLWSDAA-RLFSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGD 91
Query: 79 LFDARNVFETAP--------------------------FD--CKSSSLLWNSILRVNVSN 110
L AR +FE P FD + + WN+++ +
Sbjct: 92 LTAARELFERIPRRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNL 151
Query: 111 GLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN 170
G E +L ++ MR+ G+ D F V R C + G+ VH +V++ G +
Sbjct: 152 GFDEESLGFFLDMRREGMHPDEFGLGSVFRCCAGLRDV----VTGRQVHAYVVRSGLDRD 207
Query: 171 VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL 230
+ + + L MY + G + + + + + +S N + +G N D +GALE F M
Sbjct: 208 MCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRS 267
Query: 231 EGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHM 290
G+ + VT+ S +SS C+DLAA
Sbjct: 268 VGVAADVVTFVSAISS-----------------------------------CSDLAALAQ 292
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
G+ IHG V+K G + V V L+ +Y + G + ++ +F + +A+I++Y
Sbjct: 293 GQQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGF 352
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
G +A+E+F Q+ ++GG+ P+ +++ A++ A + +G EE +D F M
Sbjct: 353 HGHGQKAIELFKQM--MNGGA--EPSDVTFLALLYACSHSGLKEEGMDCFELM 401
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 191/641 (29%), Positives = 318/641 (49%), Gaps = 82/641 (12%)
Query: 56 VTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYEN 115
+ A+++ F++ +L++Y + G + DA+ VF+ P + S W +++ + +
Sbjct: 146 LPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVS---WAAMVAGYAARKCSQE 202
Query: 116 ALKLYVKM-RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIV 174
A +L+ +M + + + F V+ A S G VH V++ G G V +
Sbjct: 203 AFELFRQMLGECPLHKNEFVATAVLSAI----SVPLGLPMGVQVHGLVVKDGMVGFVSVE 258
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N L+ MYAK G M +F +F+ + +N I
Sbjct: 259 NSLVTMYAKAGCMDAAFHVFESSKERNSI------------------------------- 287
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
TW+++++ +++ G E + +F M G + VL+ C+D+ GK
Sbjct: 288 ----TWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQA 343
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
HG ++K GFE V+VK+AL+ +Y K G
Sbjct: 344 HGLMVKLGFEVQVYVKSALVDMYAK-------------------------------CGCI 372
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
+A E F+Q +LD ++ W+A++ NG E+AL L+ +M V N++T
Sbjct: 373 GDAKECFNQFSELD--------IVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLT 424
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
I+ LL CA AAL G+++H +++ V + L MY KCG LE+G +VF ++
Sbjct: 425 ITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMP 484
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
+D+I WNS+ISG+ NG G +A+ FEEM G PD V F+ VL ACSH GLV+ G
Sbjct: 485 HRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWT 544
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F M++++ + P+++HYACMVD+L RAG+L EA D ++++ ++ +W +L +CR
Sbjct: 545 YFRSMIKDYGLTPRLDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSL 604
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
++ DV ++ L T + +Y+LLSNIYAA +W D +VR K G+ K G SW
Sbjct: 605 RDFDVGAYAGEKLMDLGTGDSAAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSW 664
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
+E+ ++H+F G D + + L L M+++G P
Sbjct: 665 VELNSRVHVFVVGEQQHPDAEIINTELRRLGKHMKDEGYNP 705
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 179/355 (50%), Gaps = 46/355 (12%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
QVH ++ G + ++++YA+ G + A +VFE++ + +S+ W++++
Sbjct: 241 QVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSK---ERNSITWSAMITGYS 297
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
NG E+A++++ +M G FT V+ AC +G+ G+ H ++++GF+
Sbjct: 298 QNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLM----EGKQAHGLMVKLGFE 353
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
V++ + L+ MYAK G + D+ + F++ + + W M +G N + + AL L+ RM
Sbjct: 354 VQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARM 413
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
+ EG+ PN +T TSLL + CA LAA
Sbjct: 414 DKEGVFPNTLTITSLLRA-----------------------------------CAGLAAL 438
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
GK +H ++K GF V +AL +Y K G+++ +F + +++++WN++I+ +
Sbjct: 439 EPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGF 498
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
++ G ++A+ +F ++ KL+G + P+ +++ V+ A + G + FR M
Sbjct: 499 SQNGRGNDAINLFEEM-KLEGTA---PDPVTFINVLCACSHMGLVDRGWTYFRSM 549
Score = 109 bits (273), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 119/224 (53%), Gaps = 9/224 (4%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFDCKSSSLLWN 101
T+ + KQ H ++ G ++ + ++ +YA+ G + DA+ F + + D +LW
Sbjct: 336 TLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDI----VLWT 391
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
+++ +V NG +E AL LY +M K GV + T ++RAC + + G+ +H
Sbjct: 392 AMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEP----GKQLHTQ 447
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
+L+ GF + + L MY+K G + D +F ++ ++ I+WN + SGF+ N + A
Sbjct: 448 ILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDA 507
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
+ LF+ M+LEG P+ VT+ ++L + + G ++ F M K
Sbjct: 508 INLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIK 551
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 134/329 (40%), Gaps = 59/329 (17%)
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV--KVAQNLFSEIEE--KNIVSWNALIT 346
G+ +H + +K G + V N+LI Y + A +F++I +++ SWN+L+
Sbjct: 31 GEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLN 90
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM-QL 405
S+ R AL FR M
Sbjct: 91 PL----------------------------------------SHHRPLAALSHFRSMLSS 110
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV-SMNKNILVQNGLLNMYMKCGCLE 464
+ ++ + + + + A + + + G +H ++ S + N+ V LLNMY K G +
Sbjct: 111 STILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSASSNVFVSTALLNMYCKLGLIP 170
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI-EAGFKPDGVAFVAVLSAC 523
+ LVF+++ ++ ++W +M++GY + A F +M+ E + AVLSA
Sbjct: 171 DAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGECPLHKNEFVATAVLSAI 230
Query: 524 S-----HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
S G+ G + D MV +E +V + +AG + A + ++ E
Sbjct: 231 SVPLGLPMGVQVHGLVVKDGMVGFVSVENS------LVTMYAKAGCMDAAFHVFES-SKE 283
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
N+ W ++ + N + A M SQ+
Sbjct: 284 RNSITWSAMITGYSQNGNAESAVRMFSQM 312
>gi|255559020|ref|XP_002520533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540375|gb|EEF41946.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 547
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 182/554 (32%), Positives = 292/554 (52%), Gaps = 43/554 (7%)
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGN-VHIVNELIGMYAKMGQMSDSFKLFD 195
VIR F G F+ ++ FQ + +H +ELI Y + ++ L
Sbjct: 3 FVIRGITFHGP-HFKIP--------IIYRSFQSSSLHTFDELIKTYTRDHALNQGKHLHA 53
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ V S N S + L + +++ +PNF T L+ +++R G ++
Sbjct: 54 RLIVSGLASSNNFASKLISFYTETRQLSIVRKLFDRIPKPNFYQRTVLIGAYSRHGFYQD 113
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
+D+F M+ + I VL C + GK++H +++ FE V V ALI
Sbjct: 114 VLDVFSEMQNERLRPNKFVIPSVLRACGHVFDLQTGKILHSVILRHLFESDVVVNTALID 173
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD------- 368
+Y + V+ A+ +F ++EK++V+ NA++ YA+ G E + Q++ LD
Sbjct: 174 MYSRCRHVEKARKVFDGMQEKDLVALNAMVLGYAQNGFAKEGFLLVEQMQMLDIKPNLVT 233
Query: 369 --------------------GGSME----RPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
G M P+VISW++VI F N E A F++M
Sbjct: 234 WNTLISGFAQAGDKVMVQELFGLMSMHGFEPDVISWTSVISRFVQNSHNEAAFAAFKQML 293
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
NS TIS LL CA A + GRE+HG+ + + ++I V++ +++MY KCG +
Sbjct: 294 QHGAYPNSATISSLLPACASLANVRHGRELHGYAFAIGVEEDIYVRSAIVDMYSKCGLIS 353
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP-DGVAFVAVLSAC 523
E ++F ++ ++ +TWNSMI GY +G + A+ F +M + K D ++F AVL+AC
Sbjct: 354 EARMLFSKMPERHTVTWNSMIFGYANHGYCDEAIELFNQMEKTEAKKIDHLSFTAVLTAC 413
Query: 524 SHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYV 583
SH LV G+ +F +M +++I P++EHYACM+DLLGRAG L EA D++K MP+EP+ +V
Sbjct: 414 SHGRLVELGQSLFLLMHEKYKIVPRLEHYACMIDLLGRAGKLSEAYDMIKTMPVEPDLFV 473
Query: 584 WGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKT 643
WG LL +CR H D+AE A + L G+ MLLSN+YA +G WE+ AK+++ K
Sbjct: 474 WGALLGACRQHGEIDLAEIAARHLAELEPRNAGNNMLLSNLYADAGSWENVAKLKM-GKR 532
Query: 644 KGLKKVAGQSWIEV 657
K L+K + SWI++
Sbjct: 533 KRLRKFSAYSWIQL 546
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 212/412 (51%), Gaps = 51/412 (12%)
Query: 20 PFSIITYNNSLLDCFDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARF 76
P ++ +S L FD L++ H L K +H +LIV+G +S A++++S Y
Sbjct: 18 PIIYRSFQSSSLHTFDELIKTYTRDHALNQGKHLHARLIVSGLASSNNFASKLISFYTET 77
Query: 77 GRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP 136
+L R +F+ P K + ++ +G Y++ L ++ +M+ + + F P
Sbjct: 78 RQLSIVRKLFDRIP---KPNFYQRTVLIGAYSRHGFYQDVLDVFSEMQNERLRPNKFVIP 134
Query: 137 LVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDK 196
V+RAC + F G+I+H+ +L+ F+ +V + LI MY++ + + K+FD
Sbjct: 135 SVLRACGHV----FDLQTGKILHSVILRHLFESDVVVNTALIDMYSRCRHVEKARKVFDG 190
Query: 197 VRVKNYISWNMMFSGFALN-FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ K+ ++ N M G+A N F +G L L ++M++ ++PN VTW +L+S A+ G
Sbjct: 191 MQEKDLVALNAMVLGYAQNGFAKEGFL-LVEQMQMLDIKPNLVTWNTLISGFAQAGDKVM 249
Query: 256 TMDLFDMMRKRGIE-----------------------------------VGAEAIAVVLS 280
+LF +M G E + I+ +L
Sbjct: 250 VQELFGLMSMHGFEPDVISWTSVISRFVQNSHNEAAFAAFKQMLQHGAYPNSATISSLLP 309
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
CA LA G+ +HG+ G E+ ++V++A++ +Y K G + A+ LFS++ E++ V+
Sbjct: 310 ACASLANVRHGRELHGYAFAIGVEEDIYVRSAIVDMYSKCGLISEARMLFSKMPERHTVT 369
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
WN++I YA G CDEA+E+F+Q+EK + ++ +S++AV+ A S+GR
Sbjct: 370 WNSMIFGYANHGYCDEAIELFNQMEKTEAKKIDH---LSFTAVLTA-CSHGR 417
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 163/467 (34%), Positives = 269/467 (57%), Gaps = 13/467 (2%)
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE-AI 275
D D A LF ++ PN + S++ ++ + + ++ + ++ IE
Sbjct: 57 DMDYATRLFNQVS----NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTF 112
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
+ CA L + ++GK +HG + K G +V +NALI +Y K D+ A +F E+ E
Sbjct: 113 PFMFKSCASLGSCYLGKQVHGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSE 172
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
++++SWN+L++ YA G +A +F M ++SW+A+I + G E
Sbjct: 173 RDVISWNSLLSGYARLGQMKKAKGLFHL--------MIDKTIVSWTAMISGYTGIGCYVE 224
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
A+D FR+MQLA + + +++ +L CA +L +G+ IH + R + K V N L+
Sbjct: 225 AMDFFREMQLAGIEPDEISLISVLPSCAHLGSLELGKWIHMYAERRGLLKQTGVCNALIE 284
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY KCG L + +FEQ + KD+I+W++MISGY +G A TF EM A KP+G+
Sbjct: 285 MYSKCGMLSQAIQLFEQTKGKDVISWSTMISGYAYHGNAHRAFETFIEMQRAKVKPNGIT 344
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
F+ +LSACSH GL +G + FDMM ++++IEP++EHY C++D+L RAG L+ A +I K M
Sbjct: 345 FLGLLSACSHVGLWQQGLKYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTM 404
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
P++P++ +WG+LL+SCR N DVA + + + G+Y+LL+NIYA G+WED +
Sbjct: 405 PVKPDSKIWGSLLSSCRTKGNLDVALVAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVS 464
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLE 682
++R + + +KK G S IEV + F +G++ + + VL+
Sbjct: 465 RLRKIIRKENMKKTPGCSLIEVNNIVQEFVAGDNSKPFWTEISLVLQ 511
Score = 177 bits (450), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 205/403 (50%), Gaps = 17/403 (4%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F LQ+ K+ ++ K++H +IV G + S+F+ +++ + + G + A +F
Sbjct: 13 FIPFLQRVKSRNEWKKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQVS--- 69
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ L+NSI+R N LY + +++Y ++ RK D FTFP + ++C +GS
Sbjct: 70 NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYL-- 127
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ VH H+ + G + +V N LI MY K + D+ K+FD++ ++ ISWN + SG+
Sbjct: 128 --GKQVHGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGY 185
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
A A LF M ++ V+WT+++S + G E MD F M+ GIE
Sbjct: 186 ARLGQMKKAKGLFHLM----IDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDE 241
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
++ VL CA L + +GK IH + + G V NALI +Y K G + A LF +
Sbjct: 242 ISLISVLPSCAHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQ 301
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+ K+++SW+ +I+ YA G A E F ++++ + +PN I++ ++ A + G
Sbjct: 302 TKGKDVISWSTMISGYAYHGNAHRAFETFIEMQR----AKVKPNGITFLGLLSACSHVGL 357
Query: 393 GEEALDLFRKMQLAKVVANSVTISG-LLSVCAESAALNIGREI 434
++ L F M+ + + G L+ V A + L EI
Sbjct: 358 WQQGLKYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEI 400
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 55/302 (18%), Positives = 123/302 (40%), Gaps = 37/302 (12%)
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
N ++IH ++ ++++ + ++++ K G ++ +F Q+ ++ +NS+I Y
Sbjct: 24 NEWKKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQVSNPNVFLYNSIIRAY 83
Query: 489 GMNGLGENALATFEEMIEAGFK-PDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
N L + + +++++ + PD F + +C+ G G+++ + ++ P
Sbjct: 84 THNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQVHGHL---YKFGP 140
Query: 548 QMEHYA--CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMAS 605
+ ++D+ + L +A + M E + W +LL+ A+ +
Sbjct: 141 RFHVVTENALIDMYMKFDDLVDAHKVFDEMS-ERDVISWNSLLSGYARLGQMKKAKGL-- 197
Query: 606 QIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG-----------LKKVAGQSW 654
+I +T S+ + + Y G + +A + G L A
Sbjct: 198 -FHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAHLGS 256
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEEL---------ALQM--ENKGCVPDNDIILWE 703
+E+ + IHM++ L VC L E+ A+Q+ + KG D+I W
Sbjct: 257 LELGKWIHMYAERRGLLKQ-TGVCNALIEMYSKCGMLSQAIQLFEQTKG----KDVISWS 311
Query: 704 MM 705
M
Sbjct: 312 TM 313
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 209/757 (27%), Positives = 357/757 (47%), Gaps = 135/757 (17%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+L+ Y+ G + A +F+ P + WN+++ G+++ ++ L+V+M + GV
Sbjct: 89 MLTAYSHAGDISTAVALFDGMP---DPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGV 145
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D TF +++++C + S G VH ++ G + +V + L+ MY K +
Sbjct: 146 SPDRTTFAVLLKSCSALE----ELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL---EPNF-------- 237
D+ F + +N++SW +G N LELF M+ GL +P++
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 238 ------------------------VTWTSLLSSHARCGRLEETMDLFDMMRKRGIE---- 269
V T+++ +A+ L + F + +E
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321
Query: 270 ---------VGAEAIAV------------------VLSVCADLAADHMGKVIHGFVIKGG 302
+G EA+ + V S CA+ G+ +H IK G
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
F+ + V NA++ +YGK + A +F +++K+ VSWNA+I + + G D+ + F+
Sbjct: 382 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 441
Query: 363 Q----------------------LEKLDGGSMERPNVIS---------WSAVIGAFASNG 391
+ L L+ G M VI S V+ + G
Sbjct: 442 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCG 501
Query: 392 RGEEALDLFRKMQLAKVVANSVTISG-------------------------------LLS 420
+EA L ++ +VV+ + +SG +L
Sbjct: 502 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 561
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
CA A + +G++IHG +++ M + + + L++MY KCG + + LVFE++EK+D ++
Sbjct: 562 TCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS 621
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WN+MI GY ++GLG AL FE M + P+ FVAVL ACSH GL ++G R F +M
Sbjct: 622 WNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMT 681
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
+++EPQ+EH+ACMVD+LGR+ QEA + +MP + +A +W TLL+ C++ ++ ++A
Sbjct: 682 THYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIA 741
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
E AS + L + + Y+LLSN+YA SG+W D ++ R K LKK G SWIEV+ +
Sbjct: 742 ELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSE 801
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
+H F G+ + E+L +L +M+ G PD+
Sbjct: 802 MHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDS 838
Score = 142 bits (359), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 199/434 (45%), Gaps = 47/434 (10%)
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
GF + N L+ MYA+ + + ++FD + ++ +SWN M + ++ D A+ LF
Sbjct: 47 GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
M +P+ V+W +L+S + + G +E++DLF M +RG+ AV+L C+ L
Sbjct: 107 DGMP----DPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 162
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+G +H +K G E V +AL+ +YGK + A F + E+N VSW A I
Sbjct: 163 EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAI 222
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+ +E+F ++++L G +S + AF S
Sbjct: 223 AGCVQNEQYVRGLELFIEMQRLGLG-------VSQPSYASAFRS---------------- 259
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
CA + LN GR++H H ++ + + +V ++++Y K L +
Sbjct: 260 ----------------CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTD 303
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
F + + T N+M+ G GLG A+ F+ MI + + D V+ V SAC+
Sbjct: 304 ARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAE 363
Query: 526 AGLVNEGRRIFDMMVRE-FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
+G+++ + ++ F ++ + + ++DL G+ L EA I + M + ++ W
Sbjct: 364 TKGYFQGQQVHCLAIKSGFDVDICVNN--AVLDLYGKCKALMEAYLIFQGMK-QKDSVSW 420
Query: 585 GTLLNSCRMHKNTD 598
++ + + + D
Sbjct: 421 NAIIAALEQNGHYD 434
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 122/533 (22%), Positives = 223/533 (41%), Gaps = 104/533 (19%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
+ K Q +QVH I +G + + VL +Y + L +A +F+ + S+
Sbjct: 363 ETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK---QKDSVS 419
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN+I+ NG Y++ + + +M + G+ D FT+ V++AC + S + G +VH
Sbjct: 420 WNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEY----GLMVH 475
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+ V++ G + + + ++ MY K G + ++ KL D++ + +SWN
Sbjct: 476 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWN------------- 522
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
++LS + EE F M G++ A VL
Sbjct: 523 ----------------------AILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVL 560
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
CA+LA +GK IHG +IK D ++ + L+ +Y K GD+ + +F ++E+++ V
Sbjct: 561 DTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFV 620
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEK----------------------LDGGSME---- 373
SWNA+I YA GL EA+ +F +++K D G
Sbjct: 621 SWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLM 680
Query: 374 ------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
P + ++ ++ + +EA+ M A++V LLS+C
Sbjct: 681 TTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQ---ADAVIWKTLLSICKIRQD 737
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG----------CLEEGHLVFEQIEKKD 477
+ I +V+ + + + V L N+Y + G L++G L +K+
Sbjct: 738 VEIAELAASNVLLLDPDDSS-VYILLSNVYAESGKWADVSRTRRLLKQGRL-----KKEP 791
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIE-----------AGFKPDGVAFVAV 519
+W + S +G+ A E+ E +G++PD +FV V
Sbjct: 792 GCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEV 844
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 134/279 (48%), Gaps = 9/279 (3%)
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
++ GF FV N L+ +Y + A+ +F + ++ VSWN ++T+Y+ AG A
Sbjct: 43 MVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 102
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
V +F DG M P+V+SW+A++ + G +E++DLF +M V + T +
Sbjct: 103 VALF------DG--MPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAV 154
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
LL C+ L++G ++H V+ + ++ + L++MY KC L++ F + +++
Sbjct: 155 LLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERN 214
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
++W + I+G N L F EM G ++ + +C+ +N GR++
Sbjct: 215 WVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHA 274
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
++ + +VD+ +A L +A +P
Sbjct: 275 HAIKN-KFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ +L+ C + L+ VH+++I +G + AF+A+ V+ +Y + G + +A+ + +
Sbjct: 455 YGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG 514
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ WN+IL N E A K + +M +G+ D FTF V+ C + +
Sbjct: 515 ---GQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIEL 571
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H +++ + +I + L+ MYAK G M DS +F+KV ++++SWN M
Sbjct: 572 ----GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMIC 627
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
G+AL+ AL +F+RM+ E + PN T+ ++L + + G ++ F +M
Sbjct: 628 GYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLM 680
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 318 bits (815), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 209/757 (27%), Positives = 357/757 (47%), Gaps = 135/757 (17%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+L+ Y+ G + A +F+ P + WN+++ G+++ ++ L+V+M + GV
Sbjct: 131 MLTAYSHAGDISTAVALFDGMP---DPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGV 187
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D TF +++++C + S G VH ++ G + +V + L+ MY K +
Sbjct: 188 SPDRTTFAVLLKSCSALE----ELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 243
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGL---EPNF-------- 237
D+ F + +N++SW +G N LELF M+ GL +P++
Sbjct: 244 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 303
Query: 238 ------------------------VTWTSLLSSHARCGRLEETMDLFDMMRKRGIE---- 269
V T+++ +A+ L + F + +E
Sbjct: 304 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 363
Query: 270 ---------VGAEAIAV------------------VLSVCADLAADHMGKVIHGFVIKGG 302
+G EA+ + V S CA+ G+ +H IK G
Sbjct: 364 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 423
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
F+ + V NA++ +YGK + A +F +++K+ VSWNA+I + + G D+ + F+
Sbjct: 424 FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFN 483
Query: 363 Q----------------------LEKLDGGSMERPNVIS---------WSAVIGAFASNG 391
+ L L+ G M VI S V+ + G
Sbjct: 484 EMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCG 543
Query: 392 RGEEALDLFRKMQLAKVVANSVTISG-------------------------------LLS 420
+EA L ++ +VV+ + +SG +L
Sbjct: 544 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 603
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLIT 480
CA A + +G++IHG +++ M + + + L++MY KCG + + LVFE++EK+D ++
Sbjct: 604 TCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS 663
Query: 481 WNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMV 540
WN+MI GY ++GLG AL FE M + P+ FVAVL ACSH GL ++G R F +M
Sbjct: 664 WNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMT 723
Query: 541 REFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
+++EPQ+EH+ACMVD+LGR+ QEA + +MP + +A +W TLL+ C++ ++ ++A
Sbjct: 724 THYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIA 783
Query: 601 EAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRK 660
E AS + L + + Y+LLSN+YA SG+W D ++ R K LKK G SWIEV+ +
Sbjct: 784 ELAASNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSE 843
Query: 661 IHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
+H F G+ + E+L +L +M+ G PD+
Sbjct: 844 MHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDS 880
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 199/434 (45%), Gaps = 47/434 (10%)
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
GF + N L+ MYA+ + + ++FD + ++ +SWN M + ++ D A+ LF
Sbjct: 89 GFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 148
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
M +P+ V+W +L+S + + G +E++DLF M +RG+ AV+L C+ L
Sbjct: 149 DGMP----DPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSAL 204
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
+G +H +K G E V +AL+ +YGK + A F + E+N VSW A I
Sbjct: 205 EELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAI 264
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+ +E+F ++++L G +S + AF S
Sbjct: 265 AGCVQNEQYVRGLELFIEMQRLGLG-------VSQPSYASAFRS---------------- 301
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
CA + LN GR++H H ++ + + +V ++++Y K L +
Sbjct: 302 ----------------CAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTD 345
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
F + + T N+M+ G GLG A+ F+ MI + + D V+ V SAC+
Sbjct: 346 ARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAE 405
Query: 526 AGLVNEGRRIFDMMVRE-FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
+G+++ + ++ F ++ + + ++DL G+ L EA I + M + ++ W
Sbjct: 406 TKGYFQGQQVHCLAIKSGFDVDICVNN--AVLDLYGKCKALMEAYLIFQGMK-QKDSVSW 462
Query: 585 GTLLNSCRMHKNTD 598
++ + + + D
Sbjct: 463 NAIIAALEQNGHYD 476
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 122/533 (22%), Positives = 223/533 (41%), Gaps = 104/533 (19%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
+ K Q +QVH I +G + + VL +Y + L +A +F+ + S+
Sbjct: 405 ETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMK---QKDSVS 461
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN+I+ NG Y++ + + +M + G+ D FT+ V++AC + S + G +VH
Sbjct: 462 WNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEY----GLMVH 517
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
+ V++ G + + + ++ MY K G + ++ KL D++ + +SWN
Sbjct: 518 DKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWN------------- 564
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
++LS + EE F M G++ A VL
Sbjct: 565 ----------------------AILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVL 602
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
CA+LA +GK IHG +IK D ++ + L+ +Y K GD+ + +F ++E+++ V
Sbjct: 603 DTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFV 662
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEK----------------------LDGGSME---- 373
SWNA+I YA GL EA+ +F +++K D G
Sbjct: 663 SWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLM 722
Query: 374 ------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
P + ++ ++ + +EA+ M A++V LLS+C
Sbjct: 723 TTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQ---ADAVIWKTLLSICKIRQD 779
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG----------CLEEGHLVFEQIEKKD 477
+ I +V+ + + + V L N+Y + G L++G L +K+
Sbjct: 780 VEIAELAASNVLLLDPDDSS-VYILLSNVYAESGKWADVSRTRRLLKQGRL-----KKEP 833
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIE-----------AGFKPDGVAFVAV 519
+W + S +G+ A E+ E +G++PD +FV V
Sbjct: 834 GCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEV 886
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 134/279 (48%), Gaps = 9/279 (3%)
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
++ GF FV N L+ +Y + A+ +F + ++ VSWN ++T+Y+ AG A
Sbjct: 85 MVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTA 144
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
V +F DG M P+V+SW+A++ + G +E++DLF +M V + T +
Sbjct: 145 VALF------DG--MPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAV 196
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
LL C+ L++G ++H V+ + ++ + L++MY KC L++ F + +++
Sbjct: 197 LLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERN 256
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
++W + I+G N L F EM G ++ + +C+ +N GR++
Sbjct: 257 WVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHA 316
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
++ + +VD+ +A L +A +P
Sbjct: 317 HAIKN-KFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 354
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 123/233 (52%), Gaps = 10/233 (4%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
+ +L+ C + L+ VH+++I +G + AF+A+ V+ +Y + G + +A+ + +
Sbjct: 497 YGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIG 556
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ WN+IL N E A K + +M +G+ D FTF V+ C + +
Sbjct: 557 ---GQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIEL 613
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H +++ + +I + L+ MYAK G M DS +F+KV ++++SWN M
Sbjct: 614 ----GKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMIC 669
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
G+AL+ AL +F+RM+ E + PN T+ ++L + + G ++ F +M
Sbjct: 670 GYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLM 722
>gi|359492783|ref|XP_002278486.2| PREDICTED: pentatricopeptide repeat-containing protein At3g21470
[Vitis vinifera]
Length = 575
Score = 318 bits (815), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 183/567 (32%), Positives = 299/567 (52%), Gaps = 59/567 (10%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
W ++R +S G AL +Y +R+ GV G PLV++AC + + G+ +H
Sbjct: 63 WCHLIRSYLSQGAPREALLVYTGLRRKGVYLLGVA-PLVLKACASLSIVKH----GKALH 117
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
++ G +V I L+ MYAK G + DS K+FD + +N ++WN M G+ N D
Sbjct: 118 AESIKNGVDFDVMIGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDSK 177
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
A+ LF++M + VTW ++ AR G E FD
Sbjct: 178 SAVLLFEKMSIR----TAVTWIEMIDGFARSGDTETARRFFD------------------ 215
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
D+ ++ V ++ G Y ++ +++ A+ +F + ++N
Sbjct: 216 ----DVPSELRNVVTWTVMVDG---------------YARNAEMEAAREVFEGMPQRNFF 256
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDL 399
+W+++I+ Y + G EA +F ++ N+++W+++I +A NG EEAL+
Sbjct: 257 AWSSMISGYCKKGNVKEARSIFDRIPVR--------NLVNWNSLISGYAQNGFSEEALEA 308
Query: 400 FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
F KMQ + VTI+ +LS C++ L+ G++IH + + N V NGL++MY K
Sbjct: 309 FGKMQAEGFEPDEVTIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAK 368
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
CG L L+FE + ++ WNSMISG+ ++G + AL F M ++ PD + F++V
Sbjct: 369 CGDLANARLIFEGMAHRNRACWNSMISGFAIHGQSKEALEFFGRMEDSHEGPDEITFLSV 428
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
LSAC+H G VN G IF M ++ + ++HY C++DLLGRAG ++EA D++K MP++P
Sbjct: 429 LSACAHGGFVNAGLEIFSRM-EKYGLTTGIKHYGCLIDLLGRAGRIKEAYDLIKRMPVKP 487
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS----YMLLSNIYAASGRWEDAA 635
N VWG LL +CR+H + ++A+ + +I + + + Y+LLSNIYAAS RWE A
Sbjct: 488 NDVVWGALLGACRVHLDMEMADRVVEEIVKVDSNISSGCDSHYVLLSNIYAASDRWEKAE 547
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIH 662
K+R+ KG +K +G S I H
Sbjct: 548 KMRMEMANKGFQKTSGCSSIMPGNNTH 574
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 184/368 (50%), Gaps = 21/368 (5%)
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
P+ W L+ S+ G E + ++ +R++G+ + A +VL CA L+ GK +
Sbjct: 58 PSLSNWCHLIRSYLSQGAPREALLVYTGLRRKGVYLLGVA-PLVLKACASLSIVKHGKAL 116
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
H IK G + V + +L+C+Y K G+V ++ +F + E+N V+WNA+I Y G
Sbjct: 117 HAESIKNGVDFDVMIGTSLVCMYAKCGNVVDSRKVFDYMPERNAVTWNAMICGYLGNGDS 176
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM--QLAKVVANS 412
AV +F + M ++W +I FA +G E A F + +L VV +
Sbjct: 177 KSAVLLFEK--------MSIRTAVTWIEMIDGFARSGDTETARRFFDDVPSELRNVVTWT 228
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
V + G A +A + RE+ + + +N + +++ Y K G ++E +F++
Sbjct: 229 VMVDGY----ARNAEMEAAREVFEGMPQ----RNFFAWSSMISGYCKKGNVKEARSIFDR 280
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
I ++L+ WNS+ISGY NG E AL F +M GF+PD V +VLSACS GL++ G
Sbjct: 281 IPVRNLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEVTIASVLSACSQLGLLDAG 340
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
++I MM + I+ +VD+ + G L A I + M N W ++++
Sbjct: 341 KKIHHMMNHK-GIKLNQFVLNGLVDMYAKCGDLANARLIFEGMAHR-NRACWNSMISGFA 398
Query: 593 MHKNTDVA 600
+H + A
Sbjct: 399 IHGQSKEA 406
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 208/444 (46%), Gaps = 27/444 (6%)
Query: 37 LLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L+ C ++ +K +H + I G + + ++ +YA+ G + D+R VF+ P
Sbjct: 100 VLKACASLSIVKHGKALHAESIKNGVDFDVMIGTSLVCMYAKCGNVVDSRKVFDYMP--- 156
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ +++ WN+++ + NG ++A+ L+ KM + T+ +I G
Sbjct: 157 ERNAVTWNAMICGYLGNGDSKSAVLLFEKMS----IRTAVTWIEMIDGFARSGDTETARR 212
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
F V + + NV ++ YA+ +M + ++F+ + +N+ +W+ M SG+
Sbjct: 213 FFDDVPSELR------NVVTWTVMVDGYARNAEMEAAREVFEGMPQRNFFAWSSMISGYC 266
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ A +F R+ + N V W SL+S +A+ G EE ++ F M+ G E
Sbjct: 267 KKGNVKEARSIFDRIPVR----NLVNWNSLISGYAQNGFSEEALEAFGKMQAEGFEPDEV 322
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
IA VLS C+ L GK IH + G + FV N L+ +Y K GD+ A+ +F +
Sbjct: 323 TIASVLSACSQLGLLDAGKKIHHMMNHKGIKLNQFVLNGLVDMYAKCGDLANARLIFEGM 382
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
+N WN++I+ +A G EA+E F ++E S E P+ I++ +V+ A A G
Sbjct: 383 AHRNRACWNSMISGFAIHGQSKEALEFFGRMED----SHEGPDEITFLSVLSACAHGGFV 438
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
L++F +M+ + L+ + + + +E + + R+ + N +V L
Sbjct: 439 NAGLEIFSRMEKYGLTTGIKHYGCLIDLLGRAGRI---KEAYDLIKRMPVKPNDVVWGAL 495
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKD 477
L +E V E+I K D
Sbjct: 496 LGACRVHLDMEMADRVVEEIVKVD 519
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 280/509 (55%), Gaps = 31/509 (6%)
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLE-ETMDLFDMMRKRGIEVG 271
+L D AL L ++ PN + +++ A E + ++ M +GI
Sbjct: 84 SLPIDPRYALSLLAQLR----TPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPD 139
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
I VL CA+ A G+ +HG IK G V+V N L+ +Y ++ A+ +F
Sbjct: 140 NYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFD 199
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVF------SQLEKLDGGSM------------- 372
++++VSW +I Y + G E V ++ L+ G ++
Sbjct: 200 TSPQRDLVSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDANFA 259
Query: 373 -----ERP--NVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
E P NV+SW+++I A G+ +E+L +FRKMQ V + VT+ +L+ CA
Sbjct: 260 RKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANL 319
Query: 426 AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMI 485
L +G+ +H ++ R + + + N L++MY KCG +++ VF+ + +KD+ ++ +MI
Sbjct: 320 GVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMI 379
Query: 486 SGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRI 545
G M+G G AL F EM + G +PD V FV VL+ACSH GLV EGR+ F+ M + +
Sbjct: 380 VGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNL 439
Query: 546 EPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMAS 605
PQ+EHY CMVDLLGRAGL+ EA + ++NMP+EP+A+V G LL +C++H ++ E++
Sbjct: 440 RPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMK 499
Query: 606 QIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFS 665
+I + G+Y+L+SNIY+++ RW DA K+R + K + L+K G S IE+ IH F
Sbjct: 500 KIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIELDGVIHEFQ 559
Query: 666 SGNSLQSDLKNVCEVLEELALQMENKGCV 694
G+ +K + ++L+E+ ++N C+
Sbjct: 560 KGDKSHPKIKEIYKLLDEIMSHLKNNECL 588
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 223/512 (43%), Gaps = 83/512 (16%)
Query: 9 PHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASA----- 63
PH F+P S F LQ CK+I LKQ+H +I T + A
Sbjct: 30 PHDFNPHKLS---------------FLSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTIS 74
Query: 64 ----FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR-VNVSNGLYENALK 118
L A+ L I R+ A+ P L+N+I+R + SN L
Sbjct: 75 TRLSALCAQSLPIDPRYALSLLAQLRTPNLP--------LYNAIIRGLATSNNDSIEGLV 126
Query: 119 LYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELI 178
+Y +M G++ D +T P V++AC + R G+ VH ++MG +V++ N L+
Sbjct: 127 VYKQMLSKGIVPDNYTIPFVLKACAESRAVRE----GEEVHGQAIKMGLASDVYVSNTLM 182
Query: 179 GMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA-LNF--------------------- 216
MYA + + K+FD ++ +SW M G+ + F
Sbjct: 183 RMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLDVFV 242
Query: 217 ------------DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR 264
D + A ++F+ M ++ N V+W S++S A+ G+ +E++ +F M+
Sbjct: 243 GNALVDMYLKCGDANFARKVFQEMPVK----NVVSWNSMISGLAQKGQFKESLYMFRKMQ 298
Query: 265 KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVK 324
+ G++ + VL+ CA+L +GK +H ++ + F+ NAL+ +Y K G +
Sbjct: 299 RLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSID 358
Query: 325 VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVI 384
A +F + K++ S+ A+I A G +A+++FS++ K+ P+ +++ V+
Sbjct: 359 QACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMG----IEPDEVTFVGVL 414
Query: 385 GAFASNGRGEEALDLFRKMQLAKVVANSVTISG-LLSVCAESAALNIGREIHGHVVRVSM 443
A + G EE F M + + G ++ + + +N E + + +
Sbjct: 415 TACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEF---IRNMPI 471
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
+ V LL G +E G V ++IEK
Sbjct: 472 EPDAFVLGALLGACKIHGKVELGESVMKKIEK 503
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 124/264 (46%), Gaps = 17/264 (6%)
Query: 336 KNIVSWNALIT-SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA-SNGRG 393
K + S +A +T S + LC +++ + + + PN+ ++A+I A SN
Sbjct: 62 KTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIRGLATSNNDS 121
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
E L ++++M +V ++ TI +L CAES A+ G E+HG +++ + ++ V N L
Sbjct: 122 IEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTL 181
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD- 512
+ MY C + VF+ ++DL++W +MI GY G + + + + D
Sbjct: 182 MRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLY-IIRNSNVNLDV 240
Query: 513 --GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASD 570
G A V + C A N R++F M + + + M+ L + G +E+
Sbjct: 241 FVGNALVDMYLKCGDA---NFARKVFQEMPVK-----NVVSWNSMISGLAQKGQFKESLY 292
Query: 571 IVKNMP---MEPNAYVWGTLLNSC 591
+ + M ++P+ +LNSC
Sbjct: 293 MFRKMQRLGVKPDDVTLVAVLNSC 316
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 278/544 (51%), Gaps = 75/544 (13%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H H+ F+G+ + N LI +Y K G + ++ K+FDK+R K+
Sbjct: 73 IHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRKKD---------------- 116
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
V+WTSL++ +A+ E + L M K + A
Sbjct: 117 -------------------MVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFAS 157
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
+L A +G IH +K + + V+V +AL+ +Y
Sbjct: 158 LLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMY-------------------- 197
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
A G D A VF +L+ +G +SW+A+I FA G GE AL
Sbjct: 198 -----------ARCGKMDMATAVFDKLDSKNG--------VSWNALISGFARKGDGETAL 238
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
+F +MQ A T S + S A AL G+ +H H+V+ V N +L+MY
Sbjct: 239 MVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMY 298
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
K G + + VFE++ KDL+TWNSM++ + GLG+ A++ FEEM ++G + + F+
Sbjct: 299 AKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFL 358
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
+L+ACSH GLV EG+ FDM ++E+ +EP++EHY +VDLLGRAGLL A + MPM
Sbjct: 359 CILTACSHGGLVKEGKHYFDM-IKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPM 417
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
EP A VWG LL +CRMHKN V + A +F L + +G +LL NIYA++G W+ AA+V
Sbjct: 418 EPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARV 477
Query: 638 RISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
R K G+KK SW+E+ +HMF + + + + ++ +E+++++ +G VPD
Sbjct: 478 RKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDM 537
Query: 698 DIIL 701
D +L
Sbjct: 538 DYVL 541
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 179/383 (46%), Gaps = 49/383 (12%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
Q K + +++H L + AFL ++ +Y + G + +A VF+ K +
Sbjct: 63 QSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMR---KKDMVS 119
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
W S++ N + A+ L M K +GFTF +++A G++ GQI H
Sbjct: 120 WTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAA---GAYADSGIGGQI-H 175
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
++ + +V++ + L+ MYA+ G+M + +FDK+ KN +SWN + SGFA D +
Sbjct: 176 ALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVL 279
AL +F M+ G E T++S+ S A G LE+
Sbjct: 236 TALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQ------------------------ 271
Query: 280 SVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV 339
GK +H ++K + FV N ++ +Y K G + A+ +F + K++V
Sbjct: 272 -----------GKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLV 320
Query: 340 SWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG---RGEEA 396
+WN+++T++A+ GL EAV F ++ K S N I++ ++ A + G G+
Sbjct: 321 TWNSMLTAFAQYGLGKEAVSHFEEMRK----SGIYLNQITFLCILTACSHGGLVKEGKHY 376
Query: 397 LDLFRKMQLAKVVANSVTISGLL 419
D+ ++ L + + VT+ LL
Sbjct: 377 FDMIKEYNLEPEIEHYVTVVDLL 399
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 206/691 (29%), Positives = 350/691 (50%), Gaps = 50/691 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+QVH Q + +G + ++ +Y + D R +F+ + + W S+L
Sbjct: 124 RQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGI---KNVVSWTSLLSGY 180
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
NGL + + L +M+ GV +GFTF V+ A + G VH +++ GF
Sbjct: 181 ARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGAL----ADESIIEGGVQVHAMIVKNGF 236
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA-LNFDCDGALELFK 226
+ + N LI MY K + D+ +FD + V++ ++WN+M G+A + F +G ++F
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG-FQMFH 295
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE---AIAVVLSVCA 283
RM L G++ + + + L ++ L T L + K G E + A+ V S C+
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCS 355
Query: 284 DL--------AADHMGKVIHGFVIKGGFEDYVFVKNA--LICVYGKHGD----------- 322
+ AD V+ + GGF K A L C + G
Sbjct: 356 SVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVL 415
Query: 323 VKVAQNLFSEIEEKNIVSW--------NALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
+L S++ + I ++ AL+ +Y + G E+ VF + D
Sbjct: 416 AGKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD------ 469
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA-LNIGRE 433
+++WSA++ A E+A+++F ++ V N T S +++ C+ SAA + G++
Sbjct: 470 --IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQ 527
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
IH V+ + + V + LL MY K G +E VF + E++D+++WNSMI+GYG +G
Sbjct: 528 IHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGD 587
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
+ AL F+ M G D V F+ VL+AC+HAGLV EG + F++M++++ I+ + EHY+
Sbjct: 588 AKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYS 647
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
CMVDL RAG+ +A DI+ MP + +W TLL +CR+H+N ++ + A ++ L
Sbjct: 648 CMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPN 707
Query: 614 TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSD 673
Y+LLSNI+A +G WE+ A VR + +KK AG SWIE+K +I F +G+
Sbjct: 708 DAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPF 767
Query: 674 LKNVCEVLEELALQMENKGCVPDNDIILWEM 704
V LEEL++++++ G PD + + ++
Sbjct: 768 SDLVYAKLEELSIKLKDMGYQPDTNYVFHDV 798
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 151/674 (22%), Positives = 260/674 (38%), Gaps = 136/674 (20%)
Query: 63 AFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVK 122
FL + L + R A +F+ P S +N +L N AL L+
Sbjct: 38 GFLYHQSLPFISLPSRPRYAHQLFDETPLKDISH---YNRLLFDFSRNNHDREALHLFKD 94
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
+ G+ DG T ++ C + F G+ VH L+ GF +V + L+ MY
Sbjct: 95 LHSSGLGVDGLTLSCALKVCGVL----FDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYM 150
Query: 183 KMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
K D +FD++ +KN +SW + SG+A N D + L +M++EG+ PN T+ +
Sbjct: 151 KTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFAT 210
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
VL AD + G +H ++K G
Sbjct: 211 -----------------------------------VLGALADESIIEGGVQVHAMIVKNG 235
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
FE FV NALIC+Y K V A+ +F + ++ V+WN +I YA G E +
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQ--- 292
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC 422
+F +M+LA V + L +C
Sbjct: 293 ------------------------------------MFHRMRLAGVKLSRTVFCTALKLC 316
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE-KKDLITW 481
++ LN +++H VV+ ++ L+ Y KC ++E +F + +++TW
Sbjct: 317 SQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTW 376
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS-------HAGLVNE--- 531
+MI G+ N + A+ F +M G +P+ + VL+ HA ++
Sbjct: 377 TAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLSQLHAQIIKAYYE 436
Query: 532 -----GRRIFDMMV---------REFRIEPQME--HYACMVDLLGRAGLLQEASDIVKNM 575
+ D V R F P + ++ M+ L + ++A ++ +
Sbjct: 437 KVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQL 496
Query: 576 PME---PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYML-----LSNIYAA 627
E PN Y + +++N+C ++ QI ++ S L L +Y+
Sbjct: 497 VKEGVKPNEYTFSSVINAC---SSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSK 553
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
G E A KV + + + V+ S I +G D K EV +
Sbjct: 554 KGNIESAEKVFTRQEERDI--VSWNSMI----------TGYGQHGDAKKALEVFQ----I 597
Query: 688 MENKGCVPDNDIIL 701
M+N+G +P +D+
Sbjct: 598 MQNQG-LPLDDVTF 610
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRV 106
L Q+H Q+I +A +L Y + G + ++ VF + P + W+++L
Sbjct: 423 LSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIP---AKDIVAWSAMLTG 479
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMG 166
E A+++++++ K GV + +TF VI AC S G+ +H ++ G
Sbjct: 480 LAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINAC---SSSAATVEHGKQIHATAVKSG 536
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
+ + + L+ MY+K G + + K+F + ++ +SWN M +G+ + D ALE+F+
Sbjct: 537 KSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQ 596
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
M+ +GL + VT+ +L++ G +EE F++M K
Sbjct: 597 IMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIK 635
>gi|414876354|tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
Length = 830
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 186/546 (34%), Positives = 287/546 (52%), Gaps = 83/546 (15%)
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFK 226
F+ + + LI YA + + + ++FD+ VKN WN M AL + AL
Sbjct: 280 FRSDPFLSTRLIEAYAALSALPAARQVFDEAPVKNIFVWNAMLKALALADHGEEALTCLA 339
Query: 227 RMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLA 286
M GRL G+ V + + A L C +
Sbjct: 340 DM----------------------GRL-------------GVPVDSYSYAHGLKACIAAS 364
Query: 287 ADHMG-----KVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
A H+ + +H I+ G+ + V LI Y K G
Sbjct: 365 ASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLG-------------------- 404
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
I SYAE VF+ SM N++SWSA+IG +A N R +A+ +F+
Sbjct: 405 ---IVSYAE--------RVFT--------SMPDRNLVSWSAMIGCYAKNERPGDAIQIFQ 445
Query: 402 KMQL--AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
+M A +V NS+TI +L CA AL G+ +H +++R + + V N L+ MYMK
Sbjct: 446 EMMASDADLVPNSITIVSVLHACAGVNALGQGKVLHAYILRRGFDLLVSVLNALMAMYMK 505
Query: 460 CGCLEEGHLVFEQI-EKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVA 518
CGCLE G +F I ++++++WNS+ISGYGM+G G +L FEEMIE G P+ + FV+
Sbjct: 506 CGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVS 565
Query: 519 VLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
VL ACSH GLV +G+++F+ MV E+ + P+ EHYACMVDLLGRAG L EA +++++M ++
Sbjct: 566 VLGACSHVGLVEQGKKLFESMV-EYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQ 624
Query: 579 PNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVR 638
P+ VWG+LL +CR+H + + AE S +F L G+Y+LL++IYA + ++
Sbjct: 625 PSPQVWGSLLGACRIHGHVEYAEMACSHLFDLEPRNAGNYVLLADIYARAKLQNQVDVLK 684
Query: 639 ISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDND 698
+ L+KV G SWIEVK+K++ F S ++ ++ + ++ E QM+N+G VPD
Sbjct: 685 ELLEEHALEKVPGCSWIEVKKKLYSFVSVDNKNPQVEELQALIGEFVTQMKNEGYVPDTR 744
Query: 699 IILWEM 704
+L+++
Sbjct: 745 SVLYDI 750
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 169/352 (48%), Gaps = 56/352 (15%)
Query: 61 ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY 120
+ FL+ R++ YA L AR VF+ AP + +WN++L+ E AL
Sbjct: 282 SDPFLSTRLIEAYAALSALPAARQVFDEAPVK---NIFVWNAMLKALALADHGEEALTCL 338
Query: 121 VKMRKLGVLGDGFTFPLVIRAC------KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIV 174
M +LGV D +++ ++AC S R R +H H ++ G+ + H+
Sbjct: 339 ADMGRLGVPVDSYSYAHGLKACIAASASHLPASARVRE-----MHAHAIRRGYGLHTHVA 393
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELE--G 232
LI YAK+G +S + ++F + +N +SW+ M +A N A+++F+ M
Sbjct: 394 TTLIDCYAKLGIVSYAERVFTSMPDRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDAD 453
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
L PN +T I VL CA + A GK
Sbjct: 454 LVPNSIT-----------------------------------IVSVLHACAGVNALGQGK 478
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI-EEKNIVSWNALITSYAEA 351
V+H ++++ GF+ V V NAL+ +Y K G ++ + +F+ I +N+VSWN+LI+ Y
Sbjct: 479 VLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMH 538
Query: 352 GLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
G E+++VF ++ + +G S PN+I++ +V+GA + G E+ LF M
Sbjct: 539 GFGRESLQVFEEMIE-EGIS---PNIITFVSVLGACSHVGLVEQGKKLFESM 586
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 176/369 (47%), Gaps = 23/369 (6%)
Query: 20 PFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRL 79
P +Y + L C +++++H I G +A ++ YA+ G +
Sbjct: 347 PVDSYSYAHGLKACIAASASHLPASARVREMHAHAIRRGYGLHTHVATTLIDCYAKLGIV 406
Query: 80 FDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM--RKLGVLGDGFTFPL 137
A VF + P + + W++++ N +A++++ +M ++ + T
Sbjct: 407 SYAERVFTSMP---DRNLVSWSAMIGCYAKNERPGDAIQIFQEMMASDADLVPNSITIVS 463
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
V+ AC + + G+++H ++L+ GF V ++N L+ MY K G + +F+ +
Sbjct: 464 VLHACAGVNAL----GQGKVLHAYILRRGFDLLVSVLNALMAMYMKCGCLETGRYIFNWI 519
Query: 198 -RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEET 256
R +N +SWN + SG+ ++ +L++F+ M EG+ PN +T+ S+L + + G +E+
Sbjct: 520 GRRRNVVSWNSLISGYGMHGFGRESLQVFEEMIEEGISPNIITFVSVLGACSHVGLVEQG 579
Query: 257 MDLFDMMRKRGIEVGAEAIAVVLSVCADLAA-DHMGKVIHGFVIKGGFEDYVFVKNALIC 315
LF+ M + + AE A ++ + D ++I I+ + V +L+
Sbjct: 580 KKLFESMVEYNVTPRAEHYACMVDLLGRAGRLDEAVELIQSMRIQPSPQ----VWGSLLG 635
Query: 316 VYGKHGDVKVAQ----NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGS 371
HG V+ A+ +LF ++E +N ++ L YA A L ++ V+V +L L+ +
Sbjct: 636 ACRIHGHVEYAEMACSHLF-DLEPRNAGNYVLLADIYARAKLQNQ-VDVLKEL--LEEHA 691
Query: 372 MERPNVISW 380
+E+ SW
Sbjct: 692 LEKVPGCSW 700
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/544 (32%), Positives = 279/544 (51%), Gaps = 75/544 (13%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+H H+ F G+ + N LI +Y K G + ++ K+FDK+R K+
Sbjct: 73 IHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNKD---------------- 116
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
V+WTSL++ +A+ E + L M K + A
Sbjct: 117 -------------------MVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFAS 157
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
+L A +G IH +K + + V+V +AL+ +Y
Sbjct: 158 LLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMY-------------------- 197
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
A G D A VF +L+ +G +SW+A+I FA G GE AL
Sbjct: 198 -----------ARCGKMDMATAVFDKLDSKNG--------VSWNALISGFARKGDGETAL 238
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
+F +MQ A T S + S A AL G+ +H H+++ V N +L+MY
Sbjct: 239 MVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVGNTMLDMY 298
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
K G + + VFE++ KDL+TWNSM++ + GLG+ A++ FEEM ++G + ++F+
Sbjct: 299 AKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFL 358
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
+L+ACSH GLV EG+ FDM ++E+ +EP++EHY +VDLLGRAGLL A + MPM
Sbjct: 359 CILTACSHGGLVKEGKHYFDM-IKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMPM 417
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
EP A VWG LL +CRMHKN V + A +F L + +G +LL NIYA++G W+ AA+V
Sbjct: 418 EPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYASTGHWDAAARV 477
Query: 638 RISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
R K G+KK SW+E++ +HMF + + + + ++ +E+++++ +G VPD
Sbjct: 478 RKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRAEEIYKMWDEISMKIRKEGYVPDM 537
Query: 698 DIIL 701
D +L
Sbjct: 538 DYVL 541
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 183/384 (47%), Gaps = 51/384 (13%)
Query: 40 QCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL 99
Q K + +++H L + AFL ++ +Y + G + +A VF+ ++ ++
Sbjct: 63 QSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDK----MRNKDMV 118
Query: 100 -WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIV 158
W S++ N + A+ L M K +GFTF +++A +G++ GQI
Sbjct: 119 SWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKA---VGAYADSGIGGQI- 174
Query: 159 HNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
H ++ + +V++ + L+ MYA+ G+M + +FDK+ KN +SWN + SGFA D
Sbjct: 175 HALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDG 234
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
+ AL +F M+ G E T++S+ S+ A G LE+
Sbjct: 235 ETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQ----------------------- 271
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
GK +H +IK + FV N ++ +Y K G + A+ +F + K++
Sbjct: 272 ------------GKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDL 319
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG---RGEE 395
V+WN+++T++A+ GL EAV F ++ K S N IS+ ++ A + G G+
Sbjct: 320 VTWNSMLTAFAQYGLGKEAVSHFEEMRK----SGIYLNQISFLCILTACSHGGLVKEGKH 375
Query: 396 ALDLFRKMQLAKVVANSVTISGLL 419
D+ ++ L + + VT+ LL
Sbjct: 376 YFDMIKEYNLEPEIEHYVTVVDLL 399
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 89/175 (50%), Gaps = 6/175 (3%)
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
++ CA+S L+ R+IH H+ + + N L+++Y KCG + E H VF+++ K
Sbjct: 56 AFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKVFDKMRNK 115
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D+++W S+I+GY N + A+ M++ FKP+G F ++L A G +I
Sbjct: 116 DMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIH 175
Query: 537 DMMVREFRIEPQMEHY--ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
+ V + + + Y + ++D+ R G + A+ + + + N W L++
Sbjct: 176 ALAV---KCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSK-NGVSWNALIS 226
>gi|255586014|ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526427|gb|EEF28706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 726
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 213/692 (30%), Positives = 341/692 (49%), Gaps = 108/692 (15%)
Query: 41 CKTIHQLKQVHNQLIV-TGANAS-AFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSL 98
CK + LKQ+H L+V TG N S +F + +++S Y++F L A +VF + ++L
Sbjct: 38 CKDLRTLKQIHASLLVSTGFNESISFPSTKLISFYSKFNDLESAISVFSLLQ---EPNTL 94
Query: 99 LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIV 158
WN I+R ++ GL AL LY KMR+ GV D FTFP + RA + S + G++V
Sbjct: 95 SWNLIMRTHLDFGLVTEALLLYKKMRESGVKTDAFTFPTINRA---VMSLKSDVLLGKMV 151
Query: 159 HNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDC 218
H +++GF +++ N +I +YA+ G + +FD++ ++ +SW M SG+ +
Sbjct: 152 HCDAMKLGFGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNV 211
Query: 219 DGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVV 278
A ELF +M LE +EPN VT + V+
Sbjct: 212 FSAFELFNKMRLE-MEPNSVT-----------------------------------LIVM 235
Query: 279 LSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNI 338
L C G+ +H ++IK G Y V+N+++ +Y G K ++LF EI +++
Sbjct: 236 LKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSITGSAKEVESLFVEIYRRDV 295
Query: 339 VSWNALITSYAEAGLCDEAVEVFSQL--------EKLD---------GGSMERPNVISWS 381
+SWN LI YA G +E V F+Q+ E L G +E + S+S
Sbjct: 296 ISWNTLIGFYALRGDAEEMVCGFNQMRGEVALSSETLTLVISVFAKIGNLVEGEKLHSFS 355
Query: 382 AVIGA------------FASNGRGEEALDLF----------------------------- 400
+G +A G ++ LF
Sbjct: 356 IKVGLCDDVLLASLLDFYAKCGELRNSVQLFGEIPCRSSSTWKLMMSGCIQNGYFDEAIH 415
Query: 401 --RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR----VSMNKNILVQNGLL 454
R+MQ + V + + L+ C+ +L + +EIHG++ R + NI + +L
Sbjct: 416 LFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEIHGYLTRNFFYILEGDNIHLGTSIL 475
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
NMY++CG + F ++ KD ITW SMI GYG++G+ AL F +M+ P+ V
Sbjct: 476 NMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYGIHGMAIEALKLFNQMLVERVLPNRV 535
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKN 574
F+++LSACSH+GL+ +G +F M F +EP ++HY CMVDLLGR G ++EA ++
Sbjct: 536 TFLSLLSACSHSGLIRQGCELFLSMKWVFGMEPDLDHYTCMVDLLGRCGKIKEALAMIIR 595
Query: 575 MPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
M + ++ +WG L+ SCR+H + V E A ++ + ++ G Y LLSNI A G+W++
Sbjct: 596 MVVVADSRIWGALVASCRVHGDKKVGEFAAQRLLEMESDNVGYYTLLSNIQAMVGKWDEV 655
Query: 635 AKVRISAKTKGLKKVAGQSWIEVKRKIHMFSS 666
+VR K L+K G S I K + + F S
Sbjct: 656 EQVRKVIHEKDLRKTPGWSCIVGKGRNYCFIS 687
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 161/350 (46%), Gaps = 36/350 (10%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L A +L YA+ G L ++ +F P C+SSS W ++ + NG ++ A+ L+ +M+
Sbjct: 365 LLASLLDFYAKCGELRNSVQLFGEIP--CRSSST-WKLMMSGCIQNGYFDEAIHLFRQMQ 421
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ----GNVHIVNELIGM 180
GV ++ AC +GS + + +H ++ + F N+H+ ++ M
Sbjct: 422 ASGVQLQAQILGSLVDACSHLGSLQL----CKEIHGYLTRNFFYILEGDNIHLGTSILNM 477
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
Y + G +S + + F+++ K+ I+W M G+ ++ AL+LF +M +E + PN VT+
Sbjct: 478 YIRCGSISSAREYFNRMVAKDNITWTSMIEGYGIHGMAIEALKLFNQMLVERVLPNRVTF 537
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAE---AIAVVLSVCADLAADHMGKVIHG 296
SLLS+ + G + + +LF M+ G+E + + +L C + + + +I
Sbjct: 538 LSLLSACSHSGLIRQGCELFLSMKWVFGMEPDLDHYTCMVDLLGRCGKI-KEALAMIIRM 596
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKV----AQNLFSEIEEKNIVSWNALITSYAEAG 352
V+ + AL+ HGD KV AQ L E+E N+ + L A G
Sbjct: 597 VVVADS-----RIWGALVASCRVHGDKKVGEFAAQRLL-EMESDNVGYYTLLSNIQAMVG 650
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIG-----AFASNGRGEEAL 397
DE +V + + D WS ++G F S G + L
Sbjct: 651 KWDEVEQVRKVIHEKD-----LRKTPGWSCIVGKGRNYCFISEGLSDNRL 695
>gi|356567012|ref|XP_003551717.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g44880-like [Glycine max]
Length = 599
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 205/692 (29%), Positives = 333/692 (48%), Gaps = 118/692 (17%)
Query: 15 SNPSRPFSIITYNNSLLDCFDHLLQ-QCKTIHQLKQVHNQLI--------------VTGA 59
S P R ++N+ C H+LQ + K+I L Q+H ++ VT
Sbjct: 5 SQPQRTL----WSNAERTCL-HILQCRTKSIPTLLQIHAFILRHSLHSNLNLLTAFVTTC 59
Query: 60 NASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKL 119
+ A A R L+I R F+A + +T L NS++ + + + L
Sbjct: 60 ASLAASAKRPLAIINHARRFFNATHTRDT---------FLCNSMIAAHFAARQFSQPFTL 110
Query: 120 YVKMRKLG--VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNEL 177
+ +R+ DG+TF +++ C + R G ++H VL+ G ++++ L
Sbjct: 111 FRDLRRQAPPFTPDGYTFTALVKGC----ATRVATGEGTLLHGMVLKNGVCFDLYVATAL 166
Query: 178 IGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNF 237
+ MY K G + + K+FD++ V++ +SW
Sbjct: 167 VDMYVKFGVLGSARKVFDEMSVRSKVSW-------------------------------- 194
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
T+++ +ARCG + E LFD M R I
Sbjct: 195 ---TAVIVGYARCGDMSEARRLFDEMEDRDI----------------------------- 222
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
NA+I Y K G V +A+ LF+E+ E+N+VSW ++++ Y G + A
Sbjct: 223 ----------VAFNAMIDGYVKMGCVGLARELFNEMRERNVVSWTSMVSGYCGNGDVENA 272
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
+F M NV +W+A+IG + N R +AL+LFR+MQ A V N VT+
Sbjct: 273 KLMFDL--------MPEKNVFTWNAMIGGYCQNRRSHDALELFREMQTASVEPNEVTVVC 324
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
+L A+ AL++GR IH +R ++++ + L++MY KCG + + L FE + +++
Sbjct: 325 VLPAVADLGALDLGRWIHRFALRKKLDRSARIGTALIDMYAKCGEITKAKLAFEGMTERE 384
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+WN++I+G+ +NG + AL F MIE GF P+ V + VLSAC+H GLV EGRR F+
Sbjct: 385 TASWNALINGFAVNGCAKEALEVFARMIEEGFGPNEVTMIGVLSACNHCGLVEEGRRWFN 444
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNT 597
M R F I PQ+EHY CMVDLLGRAG L EA ++++ MP + N + + L +C +
Sbjct: 445 AMER-FGIAPQVEHYGCMVDLLGRAGCLDEAENLIQTMPYDANGIILSSFLFACGYFNDV 503
Query: 598 DVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
AE + ++ + + G+Y++L N+YA RW D V+ K +G K S IE+
Sbjct: 504 LRAERVLKEVVKMDEDVAGNYVMLRNLYATRQRWTDVEDVKQMMKKRGTSKEVACSVIEI 563
Query: 658 KRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
F++G+ L S L+ + L +L+ M+
Sbjct: 564 GGSFIEFAAGDYLHSHLEVIQLTLGQLSKHMK 595
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/556 (32%), Positives = 308/556 (55%), Gaps = 27/556 (4%)
Query: 159 HNHVLQMGFQGNVHIVNELIGMYAKMG-----QMSDSFKLFDKVRVKNYISWNMMFSGFA 213
H +L+ G + +I L+ YA + S ++FD VR N WN M
Sbjct: 54 HALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCI 113
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
N + A+ L+ M + PN T+ ++L + + G + E + + + K G+
Sbjct: 114 ENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGH 173
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVI---KGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
++ + + A G+++ I KGG D V NA+I Y + G+V+ A+ LF
Sbjct: 174 ILSSAIRMYASF-----GRLVEARRILDDKGGEVDAV-CWNAMIDGYLRFGEVEAARELF 227
Query: 331 SEIEEKNIVS-WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
+ +++++S WNA+I+ ++ G+ + A E F ++++ D ISWSA+I +
Sbjct: 228 EGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDE--------ISWSAMIDGYIQ 279
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
G EAL++F +MQ K+ + +LS CA AL+ GR IH + R S+ + ++
Sbjct: 280 EGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVL 339
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
L++MY KCG ++ VFE++ K++ +WN+MI G M+G E+A+ F +M
Sbjct: 340 GTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DI 396
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
P+ + FV VL+AC+H GLV +G IF+ M +E+ +EPQ+EHY C+VDLLGRAGLL EA
Sbjct: 397 NPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAE 456
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASG 629
+V ++P EP VWG LL +CR H N ++ E + + L + +G Y LLSNIYA +G
Sbjct: 457 KVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAG 516
Query: 630 RWEDAAKVRISAKTKGLKKVAGQSWIEVKR-KIHMFSSGNSLQSDLKNVCEVLEELALQM 688
RWE+ +VR K +G+K G S I++ R ++H F G+ +K++ ++L+++ ++
Sbjct: 517 RWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDKVKERL 576
Query: 689 ENKGCVPDNDIILWEM 704
+ +G PD +L+++
Sbjct: 577 QMEGYEPDPSQVLFDI 592
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 144/592 (24%), Positives = 261/592 (44%), Gaps = 69/592 (11%)
Query: 7 HQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQ-QCKT-IHQLKQVHNQLIVTGANASAF 64
+ H P+ S S +++ L HLL QC T +H LKQ H ++ TG ++
Sbjct: 13 YHHHHLIPNGHSTETSKLSHKAIL-----HLLNTQCTTSLHHLKQAHALILRTGHLQDSY 67
Query: 65 LAARVLSIYARFG--RLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVK 122
+A ++ YA R + F K + LWN +++V + N A+ LY +
Sbjct: 68 IAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYE 127
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M + +T+P V++AC G + G VH H+++ G G+ HI++ I MYA
Sbjct: 128 MMVAHFRPNKYTYPAVLKACSDAGV----VAEGVQVHAHLVKHGLGGDGHILSSAIRMYA 183
Query: 183 KMGQMSDSFKLF-DKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
G++ ++ ++ DK + + WN M G+ + + A ELF+ M + TW
Sbjct: 184 SFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSM---ISTWN 240
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRG-----------IEVGA--EAIAV----------- 277
+++S +RCG +E + FD M++R I+ G EA+ +
Sbjct: 241 AMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRP 300
Query: 278 -------VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
VLS CA+L A G+ IH + + + + +L+ +Y K G + +A +F
Sbjct: 301 RKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVF 360
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
++ K + SWNA+I A G ++A+++FS+++ PN I++ V+ A A
Sbjct: 361 EKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDI-------NPNEITFVGVLNACAHG 413
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISG-LLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
G ++ L +F M+ V + G ++ + + L ++ V + V
Sbjct: 414 GLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKV---VSSIPTEPTPAV 470
Query: 450 QNGLLNMYMKCGCLEEGHLVFE---QIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
LL K G +E G V + ++E ++ + + + Y G E + M E
Sbjct: 471 WGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKE 530
Query: 507 AGFK-PDGVAFVAVLSACSHAGLVNEG-----RRIFDMMVREFRIEPQMEHY 552
G K G + + + H ++ +G + I+ M+ + + QME Y
Sbjct: 531 RGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQMLDK-VKERLQMEGY 581
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/465 (37%), Positives = 268/465 (57%), Gaps = 44/465 (9%)
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
W ++ ++R G +E + L+ M + ++G A ++ L C+DL G+ +H V+
Sbjct: 145 WVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVL 204
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
K E+ + V NAL+ Y+E G +EA+
Sbjct: 205 KA-------------------------------TEDPDQVVNNALLRLYSEDGCFEEALR 233
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
+F DG M N++SW+++I EA++ FR MQ + + VT++ +L
Sbjct: 234 MF------DG--MPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTTIL 285
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
VCA AL G+EIH +V+ + + V N L++MY KCG ++ VF ++ KDL
Sbjct: 286 PVCARVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLT 345
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN++I+GY +NG A+ +F+EMI +GF PDG+ F+A+LS CSHAGL ++G R+F+MM
Sbjct: 346 SWNTLITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMM 405
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
+ I P +EHYAC+VD+LGRAG ++EA +IVKNMP +P +WG+LLNSCR+H N +
Sbjct: 406 KMDHGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPL 465
Query: 600 AEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKR 659
AEA+A ++F L G+Y++LSNIYA +G WE VR + +G+ K AG SW+++K
Sbjct: 466 AEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKS 525
Query: 660 KIHMFSSGNSLQSDLKNVCE---VLEELALQMENKGCVPDNDIIL 701
KIH F +G S ++ +N E V + L ME G VPD ++L
Sbjct: 526 KIHTFVAGGS--NEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVL 568
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 168/350 (48%), Gaps = 45/350 (12%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L +++++++ GR+ +AR VFE D +W ++ NG + AL LY +M
Sbjct: 110 LKGKLITLFSVCGRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMV 169
Query: 125 -KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
+ G LG+ F F + ++AC +G R G+ VH VL+ + + N L+ +Y++
Sbjct: 170 CQFGQLGN-FAFSMALKACSDLGDLR----TGRAVHAQVLKATEDPDQVVNNALLRLYSE 224
Query: 184 MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSL 243
G ++ ++FD + +N +SWN + +G A+E F+ M+ +G+ ++VT T+
Sbjct: 225 DGCFEEALRMFDGMPHRNLVSWNSLIAGLVKKEGVFEAIEAFRIMQGKGMGFSWVTLTT- 283
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGF 303
+L VCA + A GK IH ++K
Sbjct: 284 ----------------------------------ILPVCARVTALGSGKEIHAVIVKSTA 309
Query: 304 EDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQ 363
+ V N+L+ +Y K G + + +F+ ++ K++ SWN LIT YA G EA+E F +
Sbjct: 310 KPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLITGYAINGRMTEAMESFQE 369
Query: 364 LEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSV 413
+ G S P+ I++ A++ + G ++ LF M++ ++ +V
Sbjct: 370 M-ICSGFS---PDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTV 415
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 174/375 (46%), Gaps = 31/375 (8%)
Query: 34 FDHLLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L+ C + L+ VH Q++ + + +L +Y+ G +A +F+ P
Sbjct: 180 FSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFEEALRMFDGMP 239
Query: 91 FDCKSSSLLWNSILRVNVSN-GLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
+ + WNS++ V G++E A++ + M+ G+ T ++ C + +
Sbjct: 240 ---HRNLVSWNSLIAGLVKKEGVFE-AIEAFRIMQGKGMGFSWVTLTTILPVCARVTAL- 294
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+ +H +++ + + ++N L+ MYAK G M ++F+ ++ K+ SWN +
Sbjct: 295 ---GSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNTLI 351
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-KRGI 268
+G+A+N A+E F+ M G P+ +T+ +LLS + G ++ LF+MM+ GI
Sbjct: 352 TGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGI 411
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGF-VIKG-GFEDYVFVKNALICVYGKHGDVK-- 324
E A ++ V G++ ++K F+ + +L+ HG+V
Sbjct: 412 SPTVEHYACLVDVLG-----RAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLA 466
Query: 325 --VAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSA 382
VA+ LF E+E N ++ L YA AG+ E+V+V + + G M + SW
Sbjct: 467 EAVAKRLF-ELEPNNAGNYVMLSNIYANAGMW-ESVKVVREFMEKRG--MTKEAGCSWLQ 522
Query: 383 V---IGAFASNGRGE 394
+ I F + G E
Sbjct: 523 IKSKIHTFVAGGSNE 537
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 5/146 (3%)
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQ-IEKKDLI--TWNSMISGYGMNGLGENALATFE 502
N ++ L+ ++ CG ++E VFE E DL W +M GY NG + AL +
Sbjct: 107 NPTLKGKLITLFSVCGRVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYY 166
Query: 503 EMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRA 562
EM+ + AF L ACS G + GR + +++ Q+ + A ++ L
Sbjct: 167 EMVCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNA-LLRLYSED 225
Query: 563 GLLQEASDIVKNMPMEPNAYVWGTLL 588
G +EA + MP N W +L+
Sbjct: 226 GCFEEALRMFDGMPHR-NLVSWNSLI 250
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 200/655 (30%), Positives = 322/655 (49%), Gaps = 83/655 (12%)
Query: 47 LKQVHNQLIVTGA-NASAFLAARVLSIYARFGRLFD-ARNVFETAPFDCKSSSLLWNSIL 104
L Q+H LI +G SA +L A L A ++F P S+ +N ++
Sbjct: 32 LPQLHAALIKSGELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRP-PLSTPCYNVLM 90
Query: 105 RVNVSNGLYENALKLYVKM--RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
R + G E+AL L+++M D T +++C M + G+ V +
Sbjct: 91 RAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCAL----DVGRGVQAYA 146
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
++ G + +++ LI MYA G ++ + +FD
Sbjct: 147 VKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAE------------------------ 182
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC 282
E V W ++++++ + G E +++F M + G+ + V++ C
Sbjct: 183 -----------ESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTAC 231
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
+ +GK + G V + G + AL+ +Y K G++ A+ LF
Sbjct: 232 GRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLF------------ 279
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
DG M+ +V++WSA+I + + EAL LF +
Sbjct: 280 -------------------------DG--MQSRDVVAWSAMISGYTQADQCREALGLFSE 312
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
MQLA+V N VT+ +LS CA AL G+ +H +V R ++ ++ L++ Y KCGC
Sbjct: 313 MQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGC 372
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
+++ FE + K+ TW ++I G NG G AL F M EAG +P V F+ VL A
Sbjct: 373 IDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMA 432
Query: 523 CSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAY 582
CSH+ LV EGRR FD M R++ I+P++EHY CMVDLLGRAGL+ EA ++ MP+EPNA
Sbjct: 433 CSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAV 492
Query: 583 VWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAK 642
+W LL+SC +H+N + E QI L +G Y+LLSNIYA++G+W+DAA VR K
Sbjct: 493 IWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMK 552
Query: 643 TKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDN 697
+G++K G S IE+ + F + +S +L+ + + +EE+ +++ G VP+
Sbjct: 553 DRGIEKTPGCSLIELDGVVFEFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNT 607
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 106/239 (44%), Gaps = 15/239 (6%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C + L K VH+ + + + L ++ YA+ G + DA FE+ P
Sbjct: 328 VLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPV-- 385
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF-RFRF 152
+S W ++++ +NG AL+L+ MR+ G+ TF V+ AC R
Sbjct: 386 -KNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRR 444
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSG 211
F + ++ G + V ++ + + G + ++++ + ++ N + W + S
Sbjct: 445 HFDSMARDY----GIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSS 500
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
A++ + E K ++ L P+ LLS+ +A G+ ++ + M+ RGIE
Sbjct: 501 CAVHRNVGIGEEALK--QIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIE 557
>gi|357123975|ref|XP_003563682.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Brachypodium distachyon]
Length = 527
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 182/559 (32%), Positives = 294/559 (52%), Gaps = 49/559 (8%)
Query: 101 NSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
N ++R G + + +Y +R G++ D FT+P V+RA +G + G+ H
Sbjct: 15 NLLIRTLARRGSFARVMAVYYDLRGRGLVADSFTYPFVLRA---IGVLKLSVE-GRKAHA 70
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
++ GF + + + L+ MY +G+ + KLFD++ +
Sbjct: 71 AAMKTGFWWDAYTASSLMDMYTLLGRADVARKLFDEMPHRA------------------- 111
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLS 280
V W ++ + RCGR + L + M + G+ + ++
Sbjct: 112 ----------------LVVWNMMIRCYVRCGRYTAAIALAEEMERSGLTPDKVTLVTSVT 155
Query: 281 VCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVS 340
VC+ +G+ IH + + G F + V NAL+ +Y K+G ++ A LF ++ +NI+S
Sbjct: 156 VCSRAGDLSLGRRIHAY-MDGVFGFSLPVANALLDMYMKNGCLEEAVKLFEQMPSRNIIS 214
Query: 341 WNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLF 400
W L++ YA AG D+A +F Q + D +I W+A+I A +G EEAL LF
Sbjct: 215 WTILVSGYAFAGQLDKARVLFYQCSEKD--------LIMWTAMINACVQHGCFEEALSLF 266
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
R+MQ+ +V + TI LL+ CA AL+ G IH V M + ++ L++MY KC
Sbjct: 267 REMQMQRVEPDRFTIVTLLTCCANLGALDQGEWIHQFAVDRKMKVDAVLGTALIDMYAKC 326
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVL 520
G +++ VFEQ++ +D W S+I G NG AL FE+M + KPD + F+ VL
Sbjct: 327 GHVKKSMEVFEQMQGRDTTAWTSIICGLATNGQAGRALELFEDMERSKVKPDSITFIGVL 386
Query: 521 SACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPN 580
SAC H GLV+EGR+ F M +RI P++EHY+C+V+LLGRAGLL EA +++++ + +
Sbjct: 387 SACCHGGLVDEGRKQFHAMKDVYRIPPRIEHYSCLVNLLGRAGLLDEAEKLIRDIQINKD 446
Query: 581 AY-VWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRI 639
A ++G LL +C+ N +++E + +I + +L+SN+YA + RWEDA +VR
Sbjct: 447 AMPLFGALLTACKAQGNVEMSERLTKRIGEQGYQIPDVNLLMSNVYATASRWEDAIRVRS 506
Query: 640 SAKTKGLKKVAGQSWIEVK 658
+KK AG S IEVK
Sbjct: 507 KMAHPTIKKTAGCSLIEVK 525
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 177/357 (49%), Gaps = 16/357 (4%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
++ H + TG A+ A+ ++ +Y GR AR +F+ P + ++WN ++R
Sbjct: 66 RKAHAAAMKTGFWWDAYTASSLMDMYTLLGRADVARKLFDEMP---HRALVVWNMMIRCY 122
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
V G Y A+ L +M + G+ D T + C G S G+ +H ++ + F
Sbjct: 123 VRCGRYTAAIALAEEMERSGLTPDKVTLVTSVTVCSRAGDL----SLGRRIHAYMDGV-F 177
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
++ + N L+ MY K G + ++ KLF+++ +N ISW ++ SG+A D A LF +
Sbjct: 178 GFSLPVANALLDMYMKNGCLEEAVKLFEQMPSRNIISWTILVSGYAFAGQLDKARVLFYQ 237
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
E + + WT+++++ + G EE + LF M+ + +E I +L+ CA+L A
Sbjct: 238 CS----EKDLIMWTAMINACVQHGCFEEALSLFREMQMQRVEPDRFTIVTLLTCCANLGA 293
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
G+ IH F + + + ALI +Y K G VK + +F +++ ++ +W ++I
Sbjct: 294 LDQGEWIHQFAVDRKMKVDAVLGTALIDMYAKCGHVKKSMEVFEQMQGRDTTAWTSIICG 353
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
A G A+E+F +E+ S +P+ I++ V+ A G +E F M+
Sbjct: 354 LATNGQAGRALELFEDMER----SKVKPDSITFIGVLSACCHGGLVDEGRKQFHAMK 406
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 147/302 (48%), Gaps = 17/302 (5%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSL-LWNSILRVNVSNGLYENALKLYVKMRKLG 127
++S YA G+L AR +F + C L +W +++ V +G +E AL L+ +M+
Sbjct: 218 LVSGYAFAGQLDKARVLF----YQCSEKDLIMWTAMINACVQHGCFEEALSLFREMQMQR 273
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
V D FT ++ C +G+ G+ +H + + + + LI MYAK G +
Sbjct: 274 VEPDRFTIVTLLTCCANLGAL----DQGEWIHQFAVDRKMKVDAVLGTALIDMYAKCGHV 329
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
S ++F++++ ++ +W + G A N ALELF+ ME ++P+ +T+ +LS+
Sbjct: 330 KKSMEVFEQMQGRDTTAWTSIICGLATNGQAGRALELFEDMERSKVKPDSITFIGVLSAC 389
Query: 248 ARCGRLEETMDLFDMMRK-RGIEVGAEAIAVVLSVCADLA-ADHMGKVIHGFVIKGGFED 305
G ++E F M+ I E + ++++ D K+I I +D
Sbjct: 390 CHGGLVDEGRKQFHAMKDVYRIPPRIEHYSCLVNLLGRAGLLDEAEKLIRDIQIN---KD 446
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEK--NIVSWNALITS-YAEAGLCDEAVEVFS 362
+ + AL+ G+V++++ L I E+ I N L+++ YA A ++A+ V S
Sbjct: 447 AMPLFGALLTACKAQGNVEMSERLTKRIGEQGYQIPDVNLLMSNVYATASRWEDAIRVRS 506
Query: 363 QL 364
++
Sbjct: 507 KM 508
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 6 LHQPHQFSPSNPSRPFSIITYNNSLLDCFDHL--LQQCKTIHQLKQVHNQLIVTGANASA 63
L + Q P R F+I+T LL C +L L Q + IHQ V ++ V A
Sbjct: 265 LFREMQMQRVEPDR-FTIVT----LLTCCANLGALDQGEWIHQFA-VDRKMKV-----DA 313
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM 123
L ++ +YA+ G + + VFE + W SI+ +NG AL+L+ M
Sbjct: 314 VLGTALIDMYAKCGHVKKSMEVFEQMQ---GRDTTAWTSIICGLATNGQAGRALELFEDM 370
Query: 124 RKLGVLGDGFTFPLVIRAC 142
+ V D TF V+ AC
Sbjct: 371 ERSKVKPDSITFIGVLSAC 389
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 213/707 (30%), Positives = 365/707 (51%), Gaps = 63/707 (8%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL-WNSILRVNV 108
VH +L + + ++S+Y++ G+ A ++F S L+ W++++
Sbjct: 88 VHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMG---SSRDLISWSAMVSCFA 144
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF- 167
+N + AL +V M + G + + F RAC F S G + V++ G+
Sbjct: 145 NNNMGFRALLTFVDMIENGYYPNEYCFAAATRACS-TAEF---VSVGDSIFGFVIKTGYL 200
Query: 168 QGNVHIVNELIGMYAK-MGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG-ALELF 225
Q +V + LI M+ K G + +FK+F+K+ +N ++W +M + + F G A++LF
Sbjct: 201 QSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRL-MQFGYAGEAIDLF 259
Query: 226 KRMELEGLEPNFVTWTSLLSS-------------HARCGRLEETMD------LFDMMRKR 266
M G EP+ T + ++S+ H++ R T+D L +M K
Sbjct: 260 LDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKC 319
Query: 267 GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY---VFVKNALICVYGKH--- 320
++ A + D +I G+V KGG+++ +F L V H
Sbjct: 320 SVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTF 379
Query: 321 ----------GDVKVAQNLFSE-----IEEKNIVSWNALITSYAEAGLCDEAVEVFSQL- 364
+++ + +F+ N V+ N+LI+ YA +G D+A + F L
Sbjct: 380 SSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVA-NSLISMYARSGRIDDARKAFDILF 438
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAE 424
EK N+IS++ VI A+A N EEAL+LF +++ + A++ T + LLS A
Sbjct: 439 EK---------NLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAAS 489
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
+ G +IH V++ + N V N L++MY +CG +E VFE +E +++I+W S+
Sbjct: 490 IGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSI 549
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I+G+ +G AL F +M+E G +P+ V ++AVLSACSH GLVNEG + F M E
Sbjct: 550 ITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHG 609
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
+ P+MEHYAC+VD+LGR+G L EA + +MP + +A VW T L +CR+H N ++ + A
Sbjct: 610 VIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAA 669
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
I +Y+LLSN+YA+ +W++ + +R + K K L K AG SW+EV+ K+H F
Sbjct: 670 KMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKF 729
Query: 665 SSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVK 711
G++ + + L+ L+++++ G VP+ D +L ++ ++ K
Sbjct: 730 YVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEK 776
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 136/562 (24%), Positives = 220/562 (39%), Gaps = 122/562 (21%)
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR-FSFGQIVHNHVLQMG 166
++NG A+ M G D T+ L ++ C R R F G +VH + Q
Sbjct: 42 INNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKC-----IRTRSFDIGTLVHEKLTQSD 96
Query: 167 FQGNVHIVNELIGMYAKMGQMSDSFKLFDKV-RVKNYISWNMMFSGFALNFDCDGALELF 225
Q + +N LI +Y+K GQ + +F + ++ ISW+ M S FA N AL F
Sbjct: 97 LQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTF 156
Query: 226 KRMELEGLEPN-------------------------FVTWTSLLSSH--ARCGRLE---- 254
M G PN FV T L S CG ++
Sbjct: 157 VDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVK 216
Query: 255 ------ETMDLFDMMRKR-------------------------------GIEVGAEAIAV 277
+F+ M +R G E ++
Sbjct: 217 GRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSG 276
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGK---HGDVKVAQNLFSEIE 334
V+S CA++ +G+ +H I+ G V LI +Y K G + A+ +F +I
Sbjct: 277 VISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQIL 336
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
+ N+ SW A+IT Y + G DE E LD
Sbjct: 337 DHNVFSWTAMITGYVQKGGYDE--------EALD-------------------------- 362
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
LFR M L V+ N T S L CA AAL IG ++ H V++ + V N L+
Sbjct: 363 ----LFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLI 418
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGV 514
+MY + G +++ F+ + +K+LI++N++I Y N E AL F E+ + G
Sbjct: 419 SMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAF 478
Query: 515 AFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC--MVDLLGRAGLLQEASDIV 572
F ++LS + G + +G +I R + ++ C ++ + R G ++ A +
Sbjct: 479 TFASLLSGAASIGTIGKGEQIH---ARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVF 535
Query: 573 KNMPMEPNAYVWGTLLNSCRMH 594
++M + N W +++ H
Sbjct: 536 EDME-DRNVISWTSIITGFAKH 556
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 129/252 (51%), Gaps = 11/252 (4%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F L+ C + L+ QV + G ++ +A ++S+YAR GR+ DAR F+
Sbjct: 379 FSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDIL- 437
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + +N+++ N E AL+L+ ++ G+ FTF ++ +G+
Sbjct: 438 --FEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGT--- 492
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H V++ G + N + N LI MY++ G + +F++F+ + +N ISW + +
Sbjct: 493 -IGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIIT 551
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIE 269
GFA + ALELF +M EG+ PN VT+ ++LS+ + G + E F M + G+
Sbjct: 552 GFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVI 611
Query: 270 VGAEAIAVVLSV 281
E A ++ +
Sbjct: 612 PRMEHYACIVDI 623
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 317 bits (813), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 169/533 (31%), Positives = 305/533 (57%), Gaps = 50/533 (9%)
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
HVL+ G+ + ++ N ++G+YAK G + + KLFD++ + WN+M SG+ + +
Sbjct: 124 HVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEE 183
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRL--------------------------- 253
A LF M + + N +TWT++++ HA+ G L
Sbjct: 184 ASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQ 243
Query: 254 ----EETMDLF-DMMRKRGIEVGAEAIAVVLSVCADLAADHMGK-VIHGFVIKGGFEDYV 307
EET+ LF DM+ ++ V+S C+ L + + ++ GF
Sbjct: 244 GGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNY 303
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEI---EEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
FVK AL+ ++ K G+++ A +F ++ + ++ V WNA+I++YA G A +F ++
Sbjct: 304 FVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKM 363
Query: 365 EKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK-VVANSVTISGLLSVCA 423
+ D +SW+++I + NG +A+ LF +M ++ + VT+ + S C
Sbjct: 364 PQRD--------TVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACG 415
Query: 424 ESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
L +G + + +I V N L++MY +CG +++ L+F+++ +DL+++N+
Sbjct: 416 HLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNT 475
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
+ISG+ +G G ++ +M E G +PD + ++A+L+ACSHAGL+ EG+R+F+ + +F
Sbjct: 476 LISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFESI--KF 533
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
P ++HYACM+D+LGRAG L+EA ++++MPMEP+A ++G+LLN+ +HK ++ E
Sbjct: 534 ---PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELA 590
Query: 604 ASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIE 656
A+++F + +G+Y+LLSNIYA++GRW+D KVR + + +G+KK G SW+E
Sbjct: 591 AAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLSWLE 643
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 38/233 (16%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETAPFDCKSSSLLWNSILR 105
LK+ H Q+ ++ N+ ++S+Y+R G + DA +F E A D S +N+++
Sbjct: 430 LKENHIQISISVYNS-------LISMYSRCGSMQDAVLIFQEMATRDLVS----YNTLIS 478
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
+G +++L +KM++ G+ D T+ ++ AC G GQ + +
Sbjct: 479 GFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAG----LLGEGQRLFESI--- 531
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
F H +I M + G++ ++ KL + ++ + G LN A +
Sbjct: 532 KFPDVDHYAC-MIDMLGRAGRLEEAMKLIQSMPMEPHAG----IYGSLLN-----ATSIH 581
Query: 226 KRMELEGL--------EPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
K++EL L EP+ LLS+ +A GR ++ + D MRK+G++
Sbjct: 582 KQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVK 634
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 191/689 (27%), Positives = 347/689 (50%), Gaps = 47/689 (6%)
Query: 21 FSIITYNNSLLDCFDHLLQQCKTIH--------QLKQVHNQLIVTGANASAFLAARVLSI 72
FSI +Y L LQ C H L +H + G+ + A +L++
Sbjct: 279 FSISSYFYPPL-----WLQSCSLYHFTLSNSPPPLGTLHALYVKNGSLQTLNPANHLLTL 333
Query: 73 YARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
YA+ + A+ +F+ P + ++ W ++ G E L+ +M+ G +
Sbjct: 334 YAKSNNMAHAQKLFDEIP---QRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQ 390
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
+T V++ C S G+ VH +L+ G +V + N ++ +Y K + +
Sbjct: 391 YTLSSVLKCC----SLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAER 446
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
LF+ + + +SWN+M + D + +L++F+R+ + + V+W +++ +CG
Sbjct: 447 LFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYK----DVVSWNTIVDGLLQCGY 502
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
++ M + G E A ++ L + + L+ +G+ +HG V+K GF+ F++++
Sbjct: 503 ERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSS 562
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
L+ +Y K G + A + ++ + NA + SY E
Sbjct: 563 LVEMYCKCGRMDKASIILRDVPLDVLRKGNARV-SYKEP--------------------- 600
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
+ ++SW +++ + NG+ E+ L FR M VV + T++ ++S CA + L GR
Sbjct: 601 -KAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGR 659
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
+H +V ++ + V + L++MY K G L++ +VF Q + +++ W SMISGY ++G
Sbjct: 660 HVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHG 719
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
G +A+ FEEM+ G P+ V F+ VL+ACSHAGL+ EG R F MM + I P +EH
Sbjct: 720 QGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVEHC 779
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
MVDL GRAG L + + + + VW + L+SCR+HKN ++ + ++ + +
Sbjct: 780 TSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAP 839
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
G+Y+LLSN+ A++ RW++AA+VR +G+KK GQSWI++K +IH F G+
Sbjct: 840 SDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHP 899
Query: 673 DLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ L+ L +++ G D +++
Sbjct: 900 QDDEIYSYLDILIGRLKEIGYSFDVKLVM 928
>gi|15235472|ref|NP_195434.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097747|sp|O23169.1|PP353_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g37170
gi|2464864|emb|CAB16758.1| putative protein [Arabidopsis thaliana]
gi|7270666|emb|CAB80383.1| putative protein [Arabidopsis thaliana]
gi|332661361|gb|AEE86761.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 165/548 (30%), Positives = 293/548 (53%), Gaps = 44/548 (8%)
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
G+ VH H+ GF + I N L+ MYAK G + D+ K+FD++ ++ SWN+M +G+A
Sbjct: 104 GKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAE 163
Query: 215 NFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK-RGIEVGAE 273
G LE +++ E E + +WT++++ + + + EE + L+ +M++
Sbjct: 164 V----GLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIF 219
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+++ ++ A + GK IHG +++ G +
Sbjct: 220 TVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDS---------------------------- 251
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
+ V W++L+ Y + G DEA +F ++ + D V+SW+++I + + R
Sbjct: 252 ---DEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD--------VVSWTSMIDRYFKSSRW 300
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
E LF ++ + N T +G+L+ CA+ +G+++HG++ RV + + L
Sbjct: 301 REGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSL 360
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY KCG +E V + K DL++W S+I G NG + AL F+ ++++G KPD
Sbjct: 361 VDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDH 420
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
V FV VLSAC+HAGLV +G F + + R+ +HY C+VDLL R+G ++ ++
Sbjct: 421 VTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVIS 480
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
MPM+P+ ++W ++L C + N D+AE A ++F + E +Y+ ++NIYAA+G+WE+
Sbjct: 481 EMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEE 540
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGC 693
K+R + G+ K G SW E+KRK H+F + ++ + E L EL +M+ +G
Sbjct: 541 EGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGY 600
Query: 694 VPDNDIIL 701
VP ++L
Sbjct: 601 VPATSLVL 608
Score = 169 bits (428), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 198/403 (49%), Gaps = 22/403 (5%)
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLF---DMMRK------RGIEVGAEAIAVVLSVCADL 285
PN ++ R R E +D+ ++R+ R + A ++ VC+
Sbjct: 39 PNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQT 98
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
A GK +H + GF + + N L+ +Y K G + A+ +F E+ +++ SWN ++
Sbjct: 99 RALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMV 158
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ- 404
YAE GL +EA ++F ++ + D SW+A++ + + EEAL L+ MQ
Sbjct: 159 NGYAEVGLLEEARKLFDEMTEKDS--------YSWTAMVTGYVKKDQPEEALVLYSLMQR 210
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
+ N T+S ++ A + G+EIHGH+VR ++ + ++ + L++MY KCGC++
Sbjct: 211 VPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCID 270
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
E +F++I +KD+++W SMI Y + + F E++ + +P+ F VL+AC+
Sbjct: 271 EARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACA 330
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
G+++ M R +P + +VD+ + G ++ A +V P +P+ W
Sbjct: 331 DLTTEELGKQVHGYMTR-VGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSW 388
Query: 585 GTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
+L+ C + D EA+ L + T ++ N+ +A
Sbjct: 389 TSLIGGCAQNGQPD--EALKYFDLLLKSGTKPDHVTFVNVLSA 429
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 117/517 (22%), Positives = 217/517 (41%), Gaps = 84/517 (16%)
Query: 25 TYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARN 84
TY N + C Q + + + K+VH + +G + R+L +YA+ G L DAR
Sbjct: 87 TYCNLIQVC-----SQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 85 VFETAP--------------------------FD--CKSSSLLWNSILRVNVSNGLYENA 116
VF+ P FD + S W +++ V E A
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEA 201
Query: 117 LKLYVKMRKL-GVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVN 175
L LY M+++ + FT + + A + R G+ +H H+++ G + + +
Sbjct: 202 LVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIR----RGKEIHGHIVRAGLDSDEVLWS 257
Query: 176 ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
L+ MY K G + ++ +FDK+ K+ +S
Sbjct: 258 SLMDMYGKCGCIDEARNIFDKIVEKDVVS------------------------------- 286
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
WTS++ + + R E LF + A VL+ CADL + +GK +H
Sbjct: 287 ----WTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVH 342
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
G++ + GF+ Y F ++L+ +Y K G+++ A+++ + ++VSW +LI A+ G D
Sbjct: 343 GYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPD 402
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM-QLAKVVANSVT 414
EA++ F L K S +P+ +++ V+ A G E+ L+ F + + ++ S
Sbjct: 403 EALKYFDLLLK----SGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDH 458
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL---NMYMKCGCLEEGHLVFE 471
+ L+ + A S ++ + + M + + +L + Y EE
Sbjct: 459 YTCLVDLLARSGRFE---QLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELF 515
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
+IE ++ +T+ +M + Y G E + M E G
Sbjct: 516 KIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIG 552
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 163/348 (46%), Gaps = 21/348 (6%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
K I + K++H ++ G ++ L + ++ +Y + G + +ARN+F+ + + W
Sbjct: 232 KCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI---VEKDVVSWT 288
Query: 102 SILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
S++ + + L+ ++ + +TF V+ AC + + G+ VH +
Sbjct: 289 SMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTE----ELGKQVHGY 344
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGA 221
+ ++GF + L+ MY K G + + + D + +SW + G A N D A
Sbjct: 345 MTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEA 404
Query: 222 LELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-DMMRKRGIEVGAEAIAVVLS 280
L+ F + G +P+ VT+ ++LS+ G +E+ ++ F + K + ++ ++
Sbjct: 405 LKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVD 464
Query: 281 VCADLAA-DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDV----KVAQNLFSEIEE 335
+ A + + VI +K F+ +++ +G++ + AQ LF +IE
Sbjct: 465 LLARSGRFEQLKSVISEMPMKPS----KFLWASVLGGCSTYGNIDLAEEAAQELF-KIEP 519
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
+N V++ + YA AG +E ++ +++++ G +RP SW+ +
Sbjct: 520 ENPVTYVTMANIYAAAGKWEEEGKMRKRMQEI--GVTKRPGS-SWTEI 564
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 229/799 (28%), Positives = 367/799 (45%), Gaps = 155/799 (19%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE-TA 89
F +L+ C I + +VH ++ G + ++++YA+ G + AR VF+ A
Sbjct: 200 FPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMA 259
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
DC S WN+++ + N E L+L++ M + V + T V A +
Sbjct: 260 MTDCIS----WNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLS--- 312
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
F + +H ++ GF +V N LI MY +G+M D+ K+F ++ K+ +SW M
Sbjct: 313 -EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMI 371
Query: 210 SGFALNFDCDGALELFKRMELEGLEPN--------------------------------- 236
SG+ N D ALE++ MEL + P+
Sbjct: 372 SGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFI 431
Query: 237 --FVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIA------------------ 276
V +LL +A+ +++ +++F M ++ + + IA
Sbjct: 432 RYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM 491
Query: 277 ------------VVLSVCADLAADHMGKVIHGFVIKGGF--EDYV-------FVK----- 310
LS CA A GK IH +V++ G E YV +VK
Sbjct: 492 LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTS 551
Query: 311 -----------------NALICVYGKHGDVKVAQNLFSEI-------------------- 333
N ++ + HG +A +LF+++
Sbjct: 552 YAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSLGRMGACSALAACACL 611
Query: 334 -------------EEKNIVSW----NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPN 376
+ K + + NAL+ YA++ D+A+EVF + + D
Sbjct: 612 GRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKD-------- 663
Query: 377 VISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHG 436
V+SWS++I F N R +AL FR M L V NSVT LS CA + AL G+EIH
Sbjct: 664 VVSWSSMIAGFCFNHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEIHA 722
Query: 437 HVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGEN 496
+V+R + V N LL++Y+KCG F +KD+++WN M+SG+ +GLG+
Sbjct: 723 YVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDI 782
Query: 497 ALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMV 556
AL+ F +M+E G PD V FV ++ ACS AG+V +G +F +F I P ++HYACMV
Sbjct: 783 ALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMV 841
Query: 557 DLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTG 616
DLL R G L EA +++ MP++P+A VWG LLN CR+H++ ++ E A I L
Sbjct: 842 DLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVA 901
Query: 617 SYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKN 676
++LL ++Y +G+W A+VR + + KGL++ G SW+EVK H F + + +K
Sbjct: 902 YHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKE 961
Query: 677 VCEVLEELALQMENKGCVP 695
+ VL + +M+ G P
Sbjct: 962 INVVLHGIYERMKACGFAP 980
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 150/503 (29%), Positives = 232/503 (46%), Gaps = 105/503 (20%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L +LS+ RFG ++ A VF P + WN ++ G E AL LY +M
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMP---ERDVFSWNVMVGGYGKVGFLEEALDLYYRML 189
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
G+ D +TFP V+R C + +R G+ VH HVL+ GF V ++N L+ MYAK
Sbjct: 190 WAGMRPDVYTFPCVLRTCGGIPDWRM----GREVHAHVLRFGFGDEVDVLNALVTMYAKC 245
Query: 185 GQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLL 244
G + + K+FD + + + ISWN M +G N +C+ LELF M ++PN +T TS+
Sbjct: 246 GDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVT 305
Query: 245 SSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE 304
+ G L EVG K +HGF +K GF
Sbjct: 306 VA---SGMLS--------------EVG------------------FAKEMHGFAVKRGFA 330
Query: 305 DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQL 364
V N+LI +Y G + A +FS +E K+ +SW A+I+ Y + G D+A+EV++ +
Sbjct: 331 IDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALM 390
Query: 365 E----------------------KLDGG----------SMERPNVISWSAVIGAFASNGR 392
E +LD G R V++ +A++ +A +
Sbjct: 391 ELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVA-NALLEMYAKSKH 449
Query: 393 GEEALDLFRKM------------------------------QLAKVVANSVTISGLLSVC 422
++A+++F+ M L V NSVT LS C
Sbjct: 450 IDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGHVKPNSVTFIAALSAC 509
Query: 423 AESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A + AL G+EIH +V+R + V N LL++Y+KCG F +KD+++WN
Sbjct: 510 AATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWN 569
Query: 483 SMISGYGMNGLGENALATFEEMI 505
M+SG+ +GLG+ AL+ F +M+
Sbjct: 570 IMLSGFVAHGLGDIALSLFNQMM 592
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 191/429 (44%), Gaps = 98/429 (22%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N ++ M + G++ ++++F K+ ++ SWN+M G
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGG----------------------- 171
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVI 294
+ + G LEE +DL+ M G+ VL C + MG+ +
Sbjct: 172 ------------YGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREV 219
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY-----A 349
H V++ GF D V V NAL+ +Y K GD+ A+ +F + + +SWNA+I +
Sbjct: 220 HAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHEC 279
Query: 350 EAGL----------------------------------------------------CDEA 357
EAGL C+
Sbjct: 280 EAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSL 339
Query: 358 VEVFSQLEKL-DGGS----MERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+++++ L ++ D G ME + +SW+A+I + NG ++AL+++ M+L V +
Sbjct: 340 IQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDD 399
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
VTI+ L+ CA L++G ++H + ++V N LL MY K +++ VF+
Sbjct: 400 VTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKF 459
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
+ +KD+++W+SMI+G+ N +AL F M+ KP+ V F+A LSAC+ G + G
Sbjct: 460 MAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML-GHVKPNSVTFIAALSACAATGALRSG 518
Query: 533 RRIFDMMVR 541
+ I ++R
Sbjct: 519 KEIHAYVLR 527
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,855,845,655
Number of Sequences: 23463169
Number of extensions: 516816094
Number of successful extensions: 1911927
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9765
Number of HSP's successfully gapped in prelim test: 2405
Number of HSP's that attempted gapping in prelim test: 1644069
Number of HSP's gapped (non-prelim): 75867
length of query: 881
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 729
effective length of database: 8,792,793,679
effective search space: 6409946591991
effective search space used: 6409946591991
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 82 (36.2 bits)