BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002790
(881 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LNP2|PPR47_ARATH Putative pentatricopeptide repeat-containing protein At1g17630
OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1
Length = 731
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/699 (53%), Positives = 500/699 (71%), Gaps = 13/699 (1%)
Query: 13 SPSNPS-RPFSIITYNN--SLLDCFDHLLQQCKTIHQLKQVHNQLIVTG-ANASAFLAAR 68
SP S + +T NN SL FDHLL C T Q +QVH Q++++ S LAA
Sbjct: 35 SPDTVSVSSYYSLTSNNDQSLFHYFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAAN 94
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S+YAR G L DARNVFET S LWNSIL+ NVS+GLYENAL+LY MR+ G+
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
GDG+ PL++RAC+++G RF + H V+Q+G + N+H+VNEL+ +Y K G+M
Sbjct: 155 TGDGYILPLILRACRYLG----RFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMG 210
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
D++ LF ++ V+N +SWN+M GF+ +DC+ A+++F+ M+ E +P+ VTWTS+LS H+
Sbjct: 211 DAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHS 270
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
+CG+ E+ + F +MR G V EA+AV SVCA+L A + + +HG+VIKGGFE+Y+
Sbjct: 271 QCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLP 330
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
+NALI VYGK G VK A++LF +I K I SWN+LITS+ +AG DEA+ +FS+LE+++
Sbjct: 331 SRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMN 390
Query: 369 GGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAAL 428
+ NV++W++VI GRG+++L+ FR+MQ +KV+ANSVTI +LS+CAE AL
Sbjct: 391 HVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPAL 450
Query: 429 NIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY 488
N+GREIHGHV+R SM++NILVQN L+NMY KCG L EG LVFE I KDLI+WNS+I GY
Sbjct: 451 NLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGY 510
Query: 489 GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQ 548
GM+G E AL+ F+ MI +GF PDG+A VAVLSACSHAGLV +GR IF M + F +EPQ
Sbjct: 511 GMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQ 570
Query: 549 MEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
EHYAC+VDLLGR G L+EAS+IVKNMPMEP V G LLNSCRMHKN D+AE +ASQ+
Sbjct: 571 QEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLS 630
Query: 609 GLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGN 668
L E TGSYMLLSNIY+A GRWE++A VR AK K LKKV+G SWIEVK+K + FSSG+
Sbjct: 631 VLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGS 690
Query: 669 SLQSDLKNVCEVLEELALQMENKGCVPD-----NDIILW 702
+QS+ + + VLE+L M KG D +D+ LW
Sbjct: 691 IVQSEFETIYPVLEDLVSHMLKKGPTHDGNNYEDDLDLW 729
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/653 (34%), Positives = 369/653 (56%), Gaps = 11/653 (1%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
Q H +++ +GA +++A++++ Y+ + DA V ++ P + ++S++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIP---DPTIYSFSSLIYALT 92
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
L+ ++ ++ +M G++ D P + + C + +F+ G+ +H G
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKV----GKQIHCVSCVSGLD 148
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+ + + MY + G+M D+ K+FD++ K+ ++ + + +A + + + M
Sbjct: 149 MDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM 208
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E G+E N V+W +LS R G +E + +F + G ++ VL D
Sbjct: 209 ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML 268
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+MG++IHG+VIK G V +A+I +YGK G V +LF++ E NA IT
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+ GL D+A+E+F E +ME NV+SW+++I A NG+ EAL+LFR+MQ+A V
Sbjct: 329 SRNGLVDKALEMF---ELFKEQTMEL-NVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
N VTI +L C AAL GR HG VRV + N+ V + L++MY KCG + +
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGL 528
VF + K+L+ WNS+++G+ M+G + ++ FE ++ KPD ++F ++LSAC GL
Sbjct: 445 VFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGL 504
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+EG + F MM E+ I+P++EHY+CMV+LLGRAG LQEA D++K MP EP++ VWG LL
Sbjct: 505 TDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
NSCR+ N D+AE A ++F L E G+Y+LLSNIYAA G W + +R ++ GLKK
Sbjct: 565 NSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKK 624
Query: 649 VAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
G SWI+VK +++ +G+ + + E ++E++ +M G P+ D L
Sbjct: 625 NPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFAL 677
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 226/660 (34%), Positives = 364/660 (55%), Gaps = 58/660 (8%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
+S Y R GR +A VF+ P + SS+ +N ++ + NG +E A KL+ +M +
Sbjct: 70 AISSYMRTGRCNEALRVFKRMP---RWSSVSYNGMISGYLRNGEFELARKLFDEMPER-- 124
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D ++ ++I+ G R R + G+ + ++ + +V N ++ YA+ G +
Sbjct: 125 --DLVSWNVMIK-----GYVRNR-NLGKA--RELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP------------- 235
D+ +FD++ KN +SWN + S + N + A LFK E L
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 236 --------------NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSV 281
+ V+W ++++ +A+ G+++E LFD E + + ++
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD-------ESPVQDVFTWTAM 287
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
+ + M + K + V NA++ Y + +++A+ LF + +N+ +W
Sbjct: 288 VSGYIQNRMVEEARELFDKMPERNEV-SWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW 346
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
N +IT YA+ G EA +F ++ K D +SW+A+I ++ +G EAL LF
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRD--------PVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+M+ N + S LS CA+ AL +G+++HG +V+ V N LL MY KCG
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
+EE + +F+++ KD+++WN+MI+GY +G GE AL FE M G KPD VAVLS
Sbjct: 459 SIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
ACSH GLV++GR+ F M +++ + P +HYACMVDLLGRAGLL++A +++KNMP EP+A
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDA 578
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISA 641
+WGTLL + R+H NT++AE A +IF + E +G Y+LLSN+YA+SGRW D K+R+
Sbjct: 579 AIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRM 638
Query: 642 KTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+ KG+KKV G SWIE++ K H FS G+ + + LEEL L+M+ G V ++L
Sbjct: 639 RDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVL 698
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 199/449 (44%), Gaps = 74/449 (16%)
Query: 205 WNMMFSGFALNFDCDGALELFKRMELEGLEPNF--VTWTSLLSSHARCGRLEETMDLFDM 262
WN+ S + C+ AL +FKRM P + V++ ++S + R G E LFD
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRM------PRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 263 MRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGD 322
M +R + ++ + + + ++GK F I E V N ++ Y ++G
Sbjct: 121 MPERDL------VSWNVMIKGYVRNRNLGKARELFEIMP--ERDVCSWNTMLSGYAQNGC 172
Query: 323 VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK--------LDGG---- 370
V A+++F + EKN VSWNAL+++Y + +EA +F E L GG
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKK 232
Query: 371 -----------SMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG-- 417
SM +V+SW+ +I +A +G+ +EA LF + + V + +SG
Sbjct: 233 KKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYI 292
Query: 418 ----------LLSVCAESAALNIGREIHGHVV--RVSMNK---------NILVQNGLLNM 456
L E ++ + G+V R+ M K N+ N ++
Sbjct: 293 QNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITG 352
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y +CG + E +F+++ K+D ++W +MI+GY +G AL F +M G + + +F
Sbjct: 353 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD-----LLGRAGLLQEASDI 571
+ LS C+ + G+++ +V+ C V + + G ++EA+D+
Sbjct: 413 SSALSTCADVVALELGKQLHGRLVK------GGYETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
K M + + W T++ H +VA
Sbjct: 467 FKEMAGK-DIVSWNTMIAGYSRHGFGEVA 494
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 131/281 (46%), Gaps = 49/281 (17%)
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
+ +I WN I+SY G C+EA+ VF + M R + +S++ +I + NG E
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKR--------MPRWSSVSYNGMISGYLRNGEFE 112
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
A LF +M +V+ +V I G + + L RE+ + +++ N +L
Sbjct: 113 LARKLFDEMPERDLVSWNVMIKGYV----RNRNLGKAREL----FEIMPERDVCSWNTML 164
Query: 455 NMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF------------- 501
+ Y + GC+++ VF+++ +K+ ++WN+++S Y N E A F
Sbjct: 165 SGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNC 224
Query: 502 --------EEMIEAG--FKP----DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
++++EA F D V++ +++ + +G ++E R++FD E ++
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD----ESPVQD 280
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
+ MV + +++EA ++ MP E N W +L
Sbjct: 281 VFT-WTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAML 319
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 228/702 (32%), Positives = 380/702 (54%), Gaps = 62/702 (8%)
Query: 9 PHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAAR 68
P F PS+ P+ I + SL LL CKT+ L+ +H Q+I G + + + ++
Sbjct: 16 PFHFLPSSSDPPYDSIRNHPSL-----SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSK 70
Query: 69 VLS---IYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK 125
++ + F L A +VF+T + + L+WN++ R + + +ALKLYV M
Sbjct: 71 LIEFCILSPHFEGLPYAISVFKTIQ---EPNLLIWNTMFRGHALSSDPVSALKLYVCMIS 127
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
LG+L + +TFP V+++C +F+ GQ +H HVL++G ++++ LI MY + G
Sbjct: 128 LGLLPNSYTFPFVLKSCAKSKAFKE----GQQIHGHVLKLGCDLDLYVHTSLISMYVQNG 183
Query: 186 QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
++ D+ K+FDK ++ +S+ + G+A + A +LF + ++ + V+W +++S
Sbjct: 184 RLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMIS 239
Query: 246 SHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
+A G +E ++LF M K + + V+S CA + +G+ +H ++ GF
Sbjct: 240 GYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFG- 298
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
N+ NALI Y++ G + A +F +L
Sbjct: 299 ------------------------------SNLKIVNALIDLYSKCGELETACGLFERLP 328
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAES 425
D VISW+ +IG + +EAL LF++M + N VT+ +L CA
Sbjct: 329 YKD--------VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380
Query: 426 AALNIGREIHGHV---VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWN 482
A++IGR IH ++ ++ N + L + L++MY KCG +E H VF I K L +WN
Sbjct: 381 GAIDIGRWIHVYIDKRLKGVTNASSL-RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 439
Query: 483 SMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE 542
+MI G+ M+G + + F M + G +PD + FV +LSACSH+G+++ GR IF M ++
Sbjct: 440 AMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD 499
Query: 543 FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEA 602
+++ P++EHY CM+DLLG +GL +EA +++ M MEP+ +W +LL +C+MH N ++ E+
Sbjct: 500 YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGES 559
Query: 603 MASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIH 662
A + + E GSY+LLSNIYA++GRW + AK R KG+KKV G S IE+ +H
Sbjct: 560 FAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVH 619
Query: 663 MFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
F G+ + + +LEE+ + +E G VPD +L EM
Sbjct: 620 EFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEM 661
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/683 (32%), Positives = 371/683 (54%), Gaps = 39/683 (5%)
Query: 50 VHNQLIVTG-ANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
+H LI G N+ + + + Y R L A +F+ P K L WN I+ VN+
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMP---KRDDLAWNEIVMVNL 65
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+G +E A++L+ +M+ G T +++ C S + F+ G+ +H +VL++G +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVC----SNKEGFAEGRQIHGYVLRLGLE 121
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
NV + N LI MY++ G++ S K+F+ ++ +N SWN + S + D A+ L M
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E+ GL+P+ VTW SLLS +A G ++ + + M+ G++ +I+ +L A+
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+GK IHG++++ V+V+ LI +Y K G + A+ +F ++ KNIV+WN+L++
Sbjct: 242 KLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGL 301
Query: 349 AEAGLCDEAVEVFSQLEK--------------------------LD--GGSMER---PNV 377
+ A L +A + ++EK LD G E+ PNV
Sbjct: 302 SYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNV 361
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
+SW+A+ + NG AL +F KMQ V N+ T+S LL + + L+ G+E+HG
Sbjct: 362 VSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGF 421
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
+R ++ + V L++MY K G L+ +F I+ K L +WN M+ GY M G GE
Sbjct: 422 CLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEG 481
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
+A F M+EAG +PD + F +VLS C ++GLV EG + FD+M + I P +EH +CMVD
Sbjct: 482 IAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVD 541
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
LLGR+G L EA D ++ M ++P+A +WG L+SC++H++ ++AE ++ L + +
Sbjct: 542 LLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSAN 601
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
YM++ N+Y+ RWED ++R + ++ SWI++ + +H+F + D ++
Sbjct: 602 YMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDI 661
Query: 678 CEVLEELALQMENKGCVPDNDII 700
L +L +M+ G VPD I
Sbjct: 662 YFELYKLVSEMKKSGYVPDTSCI 684
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 195/438 (44%), Gaps = 78/438 (17%)
Query: 37 LLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF------- 86
LLQ C + +Q+H ++ G ++ + ++ +Y+R G+L +R VF
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRN 154
Query: 87 -------------------------ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYV 121
E K + WNS+L S GL ++A+ +
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLK 214
Query: 122 KMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMY 181
+M+ G+ + +++A G + G+ +H ++L+ +V++ LI MY
Sbjct: 215 RMQIAGLKPSTSSISSLLQAVAEPGHLK----LGKAIHGYILRNQLWYDVYVETTLIDMY 270
Query: 182 AKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
K G + + +FD + KN ++WN + SG + A L RME EG++P+ +TW
Sbjct: 271 IKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWN 330
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCAD----------------- 284
SL S +A G+ E+ +D+ M+++G+ + + S C+
Sbjct: 331 SLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
Query: 285 ------------------LAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVA 326
L+ H GK +HGF ++ +V AL+ +YGK GD++ A
Sbjct: 391 GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSA 450
Query: 327 QNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA 386
+F I+ K++ SWN ++ YA G +E + FS + L+ G ME P+ I++++V+
Sbjct: 451 IEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVM--LEAG-ME-PDAITFTSVLSV 506
Query: 387 FASNGRGEEALDLFRKMQ 404
++G +E F M+
Sbjct: 507 CKNSGLVQEGWKYFDLMR 524
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/687 (31%), Positives = 361/687 (52%), Gaps = 87/687 (12%)
Query: 47 LKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP---------------- 90
++ VH +I +G + F+ R++ Y++ G L D R VF+ P
Sbjct: 39 VRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTK 98
Query: 91 --FDCKSSSLL----------WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLV 138
F ++ SL WNS++ + E AL + M K G + + ++F V
Sbjct: 99 LGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASV 158
Query: 139 IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVR 198
+ AC + + G VH+ + + F +V+I + L+ MY+K G ++D+ ++FD++
Sbjct: 159 LSACSGLNDM----NKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG 214
Query: 199 VKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMD 258
+N +S W SL++ + G E +D
Sbjct: 215 DRNVVS-----------------------------------WNSLITCFEQNGPAVEALD 239
Query: 259 LFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG-FEDYVFVKNALICVY 317
+F MM + +E +A V+S CA L+A +G+ +HG V+K + + + NA + +Y
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV 377
K +K A+ +F + +N+++ ++I+ YA A A +F++ M NV
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTK--------MAERNV 351
Query: 378 ISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
+SW+A+I + NG EEAL LF ++ V + + +L CA+ A L++G + H H
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 411
Query: 438 VVRVSMN------KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMN 491
V++ +I V N L++MY+KCGC+EEG+LVF ++ ++D ++WN+MI G+ N
Sbjct: 412 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 471
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G G AL F EM+E+G KPD + + VLSAC HAG V EGR F M R+F + P +H
Sbjct: 472 GYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH 531
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
Y CMVDLLGRAG L+EA +++ MPM+P++ +WG+LL +C++H+N + + +A ++ +
Sbjct: 532 YTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVE 591
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
+G Y+LLSN+YA G+WED VR S + +G+ K G SWI+++ H+F +
Sbjct: 592 PSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSH 651
Query: 672 SDLKNVCEVLEELALQMENKGCVPDND 698
K + +L+ L +M P+ D
Sbjct: 652 PRKKQIHSLLDILIAEMR-----PEQD 673
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 233/767 (30%), Positives = 391/767 (50%), Gaps = 122/767 (15%)
Query: 11 QFS-----PSNPSRPFSIITYNNSL-LDCFDH----LLQQCKTIHQLKQVHNQLIVTGAN 60
QFS P+ PSR ++ N + + ++H LL++C ++ +L+Q+ + G
Sbjct: 7 QFSTVPQIPNPPSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLY 66
Query: 61 ASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY 120
F +++S++ R+G + +A VFE P D K ++L++++L+ + AL+ +
Sbjct: 67 QEHFFQTKLVSLFCRYGSVDEAARVFE--PIDSK-LNVLYHTMLKGFAKVSDLDKALQFF 123
Query: 121 VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGM 180
V+MR V + F +++ C R G+ +H +++ GF ++ + L M
Sbjct: 124 VRMRYDDVEPVVYNFTYLLKVCGDEAELR----VGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 181 YAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTW 240
YAK Q++++ K+FD++ ++ +SWN + +G++ N ALE+ K M E L+P+F+T
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 241 TSLLSS-----------------------------------HARCGRLEETMDLFDMMRK 265
S+L + +A+CG LE LFD M +
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLE 299
Query: 266 RGI-------------EVGAEAIAV------------------VLSVCADLAADHMGKVI 294
R + E EA+ + L CADL G+ I
Sbjct: 300 RNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI 359
Query: 295 HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
H ++ G + V V N+LI +Y K +V A ++F +++ + +VSWNA+I +A+ G
Sbjct: 360 HKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRP 419
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
+A+ FSQ+ +P+ ++ +VI A
Sbjct: 420 IDALNYFSQMR----SRTVKPDTFTYVSVITAI--------------------------- 448
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
AE + + + IHG V+R ++KN+ V L++MY KCG + L+F+ +
Sbjct: 449 --------AELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
++ + TWN+MI GYG +G G+ AL FEEM + KP+GV F++V+SACSH+GLV G +
Sbjct: 501 ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F MM + IE M+HY MVDLLGRAG L EA D + MP++P V+G +L +C++H
Sbjct: 561 CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620
Query: 595 KNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSW 654
KN + AE A ++F L + G ++LL+NIY A+ WE +VR+S +GL+K G S
Sbjct: 621 KNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSM 680
Query: 655 IEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
+E+K ++H F SG++ D K + LE+L ++ G VPD +++L
Sbjct: 681 VEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL 727
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 241/737 (32%), Positives = 396/737 (53%), Gaps = 64/737 (8%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSIL----- 104
VH ++I +G S +L ++++Y++ G AR +F+ P ++ WN++L
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPL---RTAFSWNTVLSAYSK 92
Query: 105 ----------------RVNVS----------NGLYENALKLYVKMRKLGVLGDGFTFPLV 138
R +VS G Y A+++ M K G+ FT V
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 139 ---IRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
+ A + M + G+ VH+ ++++G +GNV + N L+ MYAK G + +FD
Sbjct: 153 LASVAATRCMET-------GKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ V++ SWN M + D A+ F++M E + VTW S++S + G
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA----ERDIVTWNSMISGFNQRGYDLR 261
Query: 256 TMDLFD-MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
+D+F M+R + +A VLS CA+L +GK IH ++ GF+ V NALI
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 315 CVYGKHGDVKVAQNLFSEIEEKN--IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
+Y + G V+ A+ L + K+ I + AL+ Y + G ++A +F L+ D
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRD---- 377
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
V++W+A+I + +G EA++LFR M NS T++ +LSV + A+L+ G+
Sbjct: 378 ----VVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE-KKDLITWNSMISGYGMN 491
+IHG V+ ++ V N L+ MY K G + F+ I ++D ++W SMI +
Sbjct: 434 QIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQH 493
Query: 492 GLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEH 551
G E AL FE M+ G +PD + +V V SAC+HAGLVN+GR+ FDMM +I P + H
Sbjct: 494 GHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSH 553
Query: 552 YACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI 611
YACMVDL GRAGLLQEA + ++ MP+EP+ WG+LL++CR+HKN D+ + A ++ L
Sbjct: 554 YACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLE 613
Query: 612 TETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQ 671
E +G+Y L+N+Y+A G+WE+AAK+R S K +KK G SWIEVK K+H+F +
Sbjct: 614 PENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTH 673
Query: 672 SDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKNVK-RIQRIRADNIKSKHRIVGF 730
+ + ++++ +++ G VPD +L ++ ++ VK +I R ++ + ++
Sbjct: 674 PEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDL--EEEVKEQILRHHSEKLAIAFGLIST 731
Query: 731 RNLKLGLRLLLSLRSTN 747
+ K LR++ +LR N
Sbjct: 732 PD-KTTLRIMKNLRVCN 747
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 233/484 (48%), Gaps = 48/484 (9%)
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
RF+ Q+VH V++ G +V+++N L+ +Y+K G + KLFD++ ++ SWN + S
Sbjct: 30 RFT-AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLS 88
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
++ D D E F ++ + + V+WT+++ + G+ + + + M K GIE
Sbjct: 89 AYSKRGDMDSTCEFFDQLP----QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP 144
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
+ VL+ A GK +H F++K G V V N+L+ +Y K GD +A+ +F
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVF 204
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+ ++I SWNA+I + + G D A+ F Q+ + D +++W+++I F
Sbjct: 205 DRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD--------IVTWNSMISGFNQR 256
Query: 391 GRGEEALDLFRKMQLAKVVA-NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
G ALD+F KM +++ + T++ +LS CA L IG++IH H+V + + +V
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQ---------------------------------IEKK 476
N L++MY +CG +E + EQ ++ +
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D++ W +MI GY +G A+ F M+ G +P+ A+LS S ++ G++I
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKN 596
V+ I A ++ + +AG + AS + E + W +++ + H +
Sbjct: 437 GSAVKSGEIYSVSVSNA-LITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 597 TDVA 600
+ A
Sbjct: 496 AEEA 499
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 166/389 (42%), Gaps = 56/389 (14%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFE------ 87
+L C + +L KQ+H+ ++ TG + S + ++S+Y+R G + AR + E
Sbjct: 285 VLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 88 ------TAPFDC------------------KSSSLLWNSILRVNVSNGLYENALKLYVKM 123
TA D + W +++ +G Y A+ L+ M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 124 RKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAK 183
G + +T A + S S G+ +H ++ G +V + N LI MYAK
Sbjct: 405 VGGGQRPNSYTLA----AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 184 MGQMSDSFKLFDKVRV-KNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTS 242
G ++ + + FD +R ++ +SW M A + + ALELF+ M +EGL P+ +T+
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVG 520
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKV-----IHGF 297
+ S+ G + + FDMM+ + I LS A + D G+ F
Sbjct: 521 VFSACTHAGLVNQGRQYFDMMKD------VDKIIPTLSHYACM-VDLFGRAGLLQEAQEF 573
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDV---KVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
+ K E V +L+ H ++ KVA +E +N +++AL Y+ G
Sbjct: 574 IEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKW 633
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAV 383
+EA ++ ++ G +++ SW V
Sbjct: 634 EEAAKIRKSMKD---GRVKKEQGFSWIEV 659
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/669 (32%), Positives = 366/669 (54%), Gaps = 58/669 (8%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL-W 100
K+ Q KQ+H Q I T + S A+ V+SIY L +A +F+T KS +L W
Sbjct: 19 KSKSQAKQLHAQFIRT-QSLSHTSASIVISIYTNLKLLHEALLLFKT----LKSPPVLAW 73
Query: 101 NSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
S++R L+ AL +V+MR G D FP V+++C M RF G+ VH
Sbjct: 74 KSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRF----GESVHG 129
Query: 161 HVLQMGFQGNVHIVNELIGMYAK---MGQMSDSFKLFDKV--RVKNYISWNMMFSGFALN 215
++++G +++ N L+ MYAK MG +FD++ R N ++ +
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
F D +F+ M + V++ ++++ +A+ G E+ + + M ++ + +
Sbjct: 190 FGIDSVRRVFEVMP----RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTL 245
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
+ VL + ++ GK IHG+VI+ G + V++ ++L+ +Y K +
Sbjct: 246 SSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARI------------ 293
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
+++ VFS+L DG ISW++++ + NGR E
Sbjct: 294 -------------------EDSERVFSRLYCRDG--------ISWNSLVAGYVQNGRYNE 326
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
AL LFR+M AKV +V S ++ CA A L++G+++HG+V+R NI + + L++
Sbjct: 327 ALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVD 386
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY KCG ++ +F+++ D ++W ++I G+ ++G G A++ FEEM G KP+ VA
Sbjct: 387 MYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVA 446
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
FVAVL+ACSH GLV+E F+ M + + + ++EHYA + DLLGRAG L+EA + + M
Sbjct: 447 FVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM 506
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
+EP VW TLL+SC +HKN ++AE +A +IF + +E G+Y+L+ N+YA++GRW++ A
Sbjct: 507 CVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMA 566
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVP 695
K+R+ + KGL+K SWIE+K K H F SG+ + + E L+ + QME +G V
Sbjct: 567 KLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVA 626
Query: 696 DNDIILWEM 704
D +L ++
Sbjct: 627 DTSGVLHDV 635
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust.
Identities = 245/768 (31%), Positives = 395/768 (51%), Gaps = 74/768 (9%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF-ETA 89
F + + C I ++ H +VTG ++ F+ ++++Y+R L DAR VF E +
Sbjct: 130 FPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMS 189
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACKFMGSF 148
+D S WNSI+ G + AL+++ +M + G D T V+ C +G+
Sbjct: 190 VWDVVS----WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTH 245
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
S G+ +H + N+ + N L+ MYAK G M ++ +F + VK+ +SWN M
Sbjct: 246 ----SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAM 301
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
+G++ + A+ LF++M+ E ++ + VTW++ +S +A+ G E + + M GI
Sbjct: 302 VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
+ + VLS CA + A GK IH + IK + KN HGD
Sbjct: 362 KPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID---LRKNG-------HGD------ 405
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+N+V N LI YA+ D A +F L S + +V++W+ +IG ++
Sbjct: 406 -------ENMVI-NQLIDMYAKCKKVDTARAMFDSL------SPKERDVVTWTVMIGGYS 451
Query: 389 SNGRGEEALDLFRKM--QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNK- 445
+G +AL+L +M + + N+ TIS L CA AAL IG++IH + +R N
Sbjct: 452 QHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAV 511
Query: 446 NILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMI 505
+ V N L++MY KCG + + LVF+ + K+ +TW S+++GYGM+G GE AL F+EM
Sbjct: 512 PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMR 571
Query: 506 EAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLL 565
GFK DGV + VL ACSH+G++++G F+ M F + P EHYAC+VDLLGRAG L
Sbjct: 572 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 631
Query: 566 QEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIY 625
A +++ MPMEP VW L+ CR+H ++ E A +I L + GSY LLSN+Y
Sbjct: 632 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 691
Query: 626 AASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELA 685
A +GRW+D ++R + KG+KK G SW+E + F G+ K + +VL +
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHM 751
Query: 686 LQMENKGCVPDNDIILWEMMGKKNVKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRS 745
++++ G VP+ L ++ ++ D++ +H L L +L + +
Sbjct: 752 QRIKDIGYVPETGFALHDVDDEEK---------DDLLFEHS----EKLALAYGILTTPQG 798
Query: 746 TNGQLMKNKLKLGLVVFNLSLKLFND---AVTATNRVISSDIRLENDS 790
++ KN L++ D A T +R+I DI L + S
Sbjct: 799 AAIRITKN------------LRVCGDCHTAFTYMSRIIDHDIILRDSS 834
Score = 243 bits (619), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 165/570 (28%), Positives = 270/570 (47%), Gaps = 58/570 (10%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSS 96
+ +CKTI Q+K +H +L+ G + L + ++S Y G L A ++ P +
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFP-PSDAG 91
Query: 97 SLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
WNS++R NG L L+ M L D +TFP V +AC + S R G+
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVR----CGE 147
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
H L GF NV + N L+ MY++ +SD+ K+FD++ V + +SWN + +A
Sbjct: 148 SAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 217 DCDGALELFKRMELE-GLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
ALE+F RM E G P+ +T +
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNIT-----------------------------------L 232
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
VL CA L +GK +H F + +FV N L+ +Y K G + A +FS +
Sbjct: 233 VNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSV 292
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
K++VSWNA++ Y++ G ++AV +F ++++ + +V++WSA I +A G G E
Sbjct: 293 KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQE----EKIKMDVVTWSAAISGYAQRGLGYE 348
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVR--VSMNKN-----IL 448
AL + R+M + + N VT+ +LS CA AL G+EIH + ++ + + KN +
Sbjct: 349 ALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENM 408
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKK--DLITWNSMISGYGMNGLGENALATFEEMIE 506
V N L++MY KC ++ +F+ + K D++TW MI GY +G AL EM E
Sbjct: 409 VINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Query: 507 --AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGL 564
+P+ L AC+ + G++I +R + + C++D+ + G
Sbjct: 469 EDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGS 528
Query: 565 LQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+ +A + NM M N W +L+ MH
Sbjct: 529 ISDARLVFDNM-MAKNEVTWTSLMTGYGMH 557
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 176/412 (42%), Gaps = 82/412 (19%)
Query: 240 WTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVI 299
W SL+ S+ G + + LF +M V C ++++ G+ H +
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSL 154
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
GF VFV NAL+ +Y + + A+ +F E+ ++VSWN++I SYA+ G A+E
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
+FS++ G RP +++T+ +L
Sbjct: 215 MFSRMTNEFGC---RP-----------------------------------DNITLVNVL 236
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
CA ++G+++H V M +N+ V N L++MY KCG ++E + VF + KD++
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVV 296
Query: 480 TWNSM-----------------------------------ISGYGMNGLGENALATFEEM 504
+WN+M ISGY GLG AL +M
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA-------CMVD 557
+ +G KP+ V ++VLS C+ G + G+ I ++ + I+ + + ++D
Sbjct: 357 LSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK-YPIDLRKNGHGDENMVINQLID 415
Query: 558 LLGRAGLLQEASDIVKNM-PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIF 608
+ + + A + ++ P E + W ++ H + + A + S++F
Sbjct: 416 MYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMF 467
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/645 (32%), Positives = 348/645 (53%), Gaps = 30/645 (4%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV 128
++S Y G + AR VFE AP C ++++N+++ N +A+ L+ KM+ G
Sbjct: 86 MVSGYCASGDITLARGVFEKAPV-CMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV--LQMGFQGNVHIVNELIGMYAKMGQ 186
D FTF V+ + Q V H L+ G + N L+ +Y+K
Sbjct: 145 KPDNFTFASVLAGLALVAD-----DEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCAS 199
Query: 187 ----MSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPN--FVTW 240
+ + K+FD++ K+ SW M +G+ N D EL LEG++ N V +
Sbjct: 200 SPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEEL-----LEGMDDNMKLVAY 254
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
+++S + G +E +++ M GIE+ V+ CA +GK +H +V++
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR 314
Query: 301 GGFEDYVF-VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
ED+ F N+L+ +Y K G A+ +F ++ K++VSWNAL++ Y +G EA
Sbjct: 315 R--EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
+F + M+ N++SW +I A NG GEE L LF M+ SG +
Sbjct: 373 IFKE--------MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAI 424
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
CA A G++ H ++++ + ++ N L+ MY KCG +EE VF + D +
Sbjct: 425 KSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSV 484
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN++I+ G +G G A+ +EEM++ G +PD + + VL+ACSHAGLV++GR+ FD M
Sbjct: 485 SWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSM 544
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDV 599
+RI P +HYA ++DLL R+G +A +++++P +P A +W LL+ CR+H N ++
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMEL 604
Query: 600 AEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKR 659
A ++FGLI E G+YMLLSN++AA+G+WE+ A+VR + +G+KK SWIE++
Sbjct: 605 GIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMET 664
Query: 660 KIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
++H F ++ + + V L++L +M G VPD +L ++
Sbjct: 665 QVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDV 709
Score = 169 bits (429), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 230/495 (46%), Gaps = 52/495 (10%)
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
R + VH +++ GFQ HI+N LI +Y K +++ + +LFD++ + I+ M
Sbjct: 27 RTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTM 86
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
SG+ + D A +F++ + + V + ++++ + ++LF M+ G
Sbjct: 87 VSGYCASGDITLARGVFEKAPV--CMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 269 EVGAEAIAVVLSVCADLAADHMGKV-IHGFVIKGGFEDYVFVKNALICVYGKHGD----V 323
+ A VL+ A +A D V H +K G V NAL+ VY K +
Sbjct: 145 KPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 324 KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
A+ +F EI EK+ SW ++T Y + G D E+ LE +D + +++++A+
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEEL---LEGMD----DNMKLVAYNAM 257
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSM 443
I + + G +EAL++ R+M + + + T ++ CA + L +G+++H +V+R
Sbjct: 258 ISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE- 316
Query: 444 NKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGY--------------- 488
+ + N L+++Y KCG +E +FE++ KDL++WN+++SGY
Sbjct: 317 DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 489 ----------------GMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
NG GE L F M GF+P AF + +C+ G G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
++ +++ + + ++ + + G+++EA + + MP ++ W L+ +
Sbjct: 437 QQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALG 494
Query: 593 MH----KNTDVAEAM 603
H + DV E M
Sbjct: 495 QHGHGAEAVDVYEEM 509
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 16/227 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
+Q H QL+ G ++S ++++YA+ G + +AR VF T P C S+ WN+++
Sbjct: 437 QQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP--CL-DSVSWNALIAAL 493
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG---SFRFRFSFGQIVHNHVLQ 164
+G A+ +Y +M K G+ D T V+ AC G R F + V+
Sbjct: 494 GQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP-- 551
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS-WNMMFSGFALNFDCDGALE 223
G H LI + + G+ SD+ + + + K W + SG ++ + + L
Sbjct: 552 ---PGADHYA-RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNME--LG 605
Query: 224 LFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
+ +L GL P LLS+ HA G+ EE + +MR RG++
Sbjct: 606 IIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVK 652
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 33/152 (21%)
Query: 404 QLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCL 463
L + +AN + L + +L + R +HG+++ + N L+++Y K L
Sbjct: 6 DLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSEL 65
Query: 464 EEGHLVFEQIEK---------------------------------KDLITWNSMISGYGM 490
+F++I + +D + +N+MI+G+
Sbjct: 66 NYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSH 125
Query: 491 NGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
N G +A+ F +M GFKPD F +VL+
Sbjct: 126 NNDGYSAINLFCKMKHEGFKPDNFTFASVLAG 157
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 363 bits (931), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 213/697 (30%), Positives = 365/697 (52%), Gaps = 59/697 (8%)
Query: 9 PHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAAR 68
P + SNP++P T NN L+++C ++ QLKQ H +I TG + + A++
Sbjct: 13 PRHPNFSNPNQP----TTNNERSRHIS-LIERCVSLRQLKQTHGHMIRTGTFSDPYSASK 67
Query: 69 VLSIYA--RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKM-RK 125
+ ++ A F L AR VF+ P K +S WN+++R S ++ ++ M +
Sbjct: 68 LFAMAALSSFASLEYARKVFDEIP---KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE 124
Query: 126 LGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMG 185
+ +TFP +I+A + S S GQ +H ++ +V + N LI Y G
Sbjct: 125 SQCYPNKYTFPFLIKAAAEVSSL----SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCG 180
Query: 186 QMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLS 245
+ + K+F ++ E + V+W S+++
Sbjct: 181 DLDSACKVFTTIK-----------------------------------EKDVVSWNSMIN 205
Query: 246 SHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED 305
+ G ++ ++LF M ++ + VLS CA + G+ + ++ +
Sbjct: 206 GFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV 265
Query: 306 YVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE 365
+ + NA++ +Y K G ++ A+ LF +EEK+ V+W ++ YA + + A EV +
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN--- 322
Query: 366 KLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA-NSVTISGLLSVCAE 424
SM + ++++W+A+I A+ NG+ EAL +F ++QL K + N +T+ LS CA+
Sbjct: 323 -----SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 425 SAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSM 484
AL +GR IH ++ + + N V + L++MY KCG LE+ VF +EK+D+ W++M
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437
Query: 485 ISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
I G M+G G A+ F +M EA KP+GV F V ACSH GLV+E +F M +
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
I P+ +HYAC+VD+LGR+G L++A ++ MP+ P+ VWG LL +C++H N ++AE
Sbjct: 498 IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMAC 557
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
+++ L G+++LLSNIYA G+WE+ +++R + GLKK G S IE+ IH F
Sbjct: 558 TRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEF 617
Query: 665 SSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIIL 701
SG++ + V L E+ ++++ G P+ +L
Sbjct: 618 LSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVL 654
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 362 bits (929), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 191/578 (33%), Positives = 319/578 (55%), Gaps = 64/578 (11%)
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ VH+ ++ + N + +L+ YA + ++ + K+FD++ +N I N+M + N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 216 FDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI 275
+++F M + P+ T+
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTF----------------------------------- 143
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
VL C+ +G+ IHG K G +FV N L+ +YGK G + A+ + E+
Sbjct: 144 PCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSR 203
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKL----DGGSME------------------ 373
+++VSWN+L+ YA+ D+A+EV ++E + D G+M
Sbjct: 204 RDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVK 263
Query: 374 -------RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESA 426
+ +++SW+ +IG + N EA++L+ +M+ ++V+I+ +L C +++
Sbjct: 264 DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 427 ALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMIS 486
AL++G++IHG++ R + N+L++N L++MY KCGCLE+ VFE ++ +D+++W +MIS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 487 GYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIE 546
YG +G G +A+A F ++ ++G PD +AFV L+ACSHAGL+ EGR F +M ++I
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 547 PQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQ 606
P++EH ACMVDLLGRAG ++EA +++M MEPN VWG LL +CR+H +TD+ A +
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADK 503
Query: 607 IFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSS 666
+F L E +G Y+LLSNIYA +GRWE+ +R K+KGLKK G S +EV R IH F
Sbjct: 504 LFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLV 563
Query: 667 GNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
G+ + L+ L +M+ G VPD++ L ++
Sbjct: 564 GDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDV 601
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 198/401 (49%), Gaps = 44/401 (10%)
Query: 36 HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
+L I L+ VH+++I+ ++ L +++ YA + AR VF+ P +
Sbjct: 47 QVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIP---ER 103
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+ ++ N ++R V+NG Y +K++ M V D +TFP V++AC G+ G
Sbjct: 104 NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTI----VIG 159
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
+ +H ++G + + N L+ MY K G +S++ + D++ ++ +SWN + G+A N
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQN 219
Query: 216 FDCDGALELFKRME----------LEGLEP-----------------------NFVTWTS 242
D ALE+ + ME + L P + V+W
Sbjct: 220 QRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNV 279
Query: 243 LLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGG 302
++ + + E ++L+ M G E A +I VL C D +A +GK IHG++ +
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 303 FEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFS 362
+ ++NALI +Y K G ++ A+++F ++ +++VSW A+I++Y +G +AV +FS
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 363 QLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKM 403
+L+ D G + P+ I++ + A + G EE F+ M
Sbjct: 400 KLQ--DSGLV--PDSIAFVTTLAACSHAGLLEEGRSCFKLM 436
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 25/235 (10%)
Query: 34 FDHLLQQCKTIHQLKQVHN-----QLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
FD L+ C+ + +K H+ L+ +N + V ++ + G
Sbjct: 222 FDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMG----------- 270
Query: 89 APFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSF 148
K S + WN ++ V + N + A++LY +M G D + V+ AC +
Sbjct: 271 -----KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSAL 325
Query: 149 RFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMM 208
S G+ +H ++ + N+ + N LI MYAK G + + +F+ ++ ++ +SW M
Sbjct: 326 ----SLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAM 381
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
S + + A+ LF +++ GL P+ + + + L++ + G LEE F +M
Sbjct: 382 ISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 436
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 359 bits (922), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 200/659 (30%), Positives = 340/659 (51%), Gaps = 80/659 (12%)
Query: 46 QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILR 105
QLKQ+H +L+V G S FL +++ + FG + AR VF+ P + WN+I+R
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP---RPQIFPWNAIIR 92
Query: 106 VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQM 165
N +++AL +Y M+ V D FTFP +++AC + + G+ VH V ++
Sbjct: 93 GYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQM----GRFVHAQVFRL 148
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
GF +V + N LI +YAK ++ + +F G L
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSA---------------RTVFEGLPLP---------- 183
Query: 226 KRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL 285
E V+WT+++S++A+ G E +++F MRK ++ A+ VL+ L
Sbjct: 184 --------ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 235
Query: 286 AADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALI 345
G+ IH V+K G E + +L +Y K G V A+ LF +
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK------------- 282
Query: 346 TSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
M+ PN+I W+A+I +A NG EA+D+F +M
Sbjct: 283 --------------------------MKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 406 AKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEE 465
V ++++I+ +S CA+ +L R ++ +V R ++ + + L++M+ KCG +E
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376
Query: 466 GHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSH 525
LVF++ +D++ W++MI GYG++G A++ + M G P+ V F+ +L AC+H
Sbjct: 377 ARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436
Query: 526 AGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWG 585
+G+V EG F+ M + +I PQ +HYAC++DLLGRAG L +A +++K MP++P VWG
Sbjct: 437 SGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWG 495
Query: 586 TLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKG 645
LL++C+ H++ ++ E A Q+F + TG Y+ LSN+YAA+ W+ A+VR+ K KG
Sbjct: 496 ALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKG 555
Query: 646 LKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
L K G SW+EV+ ++ F G+ + + +E + +++ G V + D L ++
Sbjct: 556 LNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDL 614
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 155/338 (45%), Gaps = 23/338 (6%)
Query: 29 SLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFET 88
S+L+ F L + + Q + +H ++ G L + ++YA+ G++ A+ +F+
Sbjct: 227 SVLNAFTCL----QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK 282
Query: 89 APFDCKSSSL-LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGS 147
KS +L LWN+++ NG A+ ++ +M V D + I AC +GS
Sbjct: 283 M----KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 148 FRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNM 207
S ++ +V + ++ +V I + LI M+AK G + + +FD+ ++ + W+
Sbjct: 339 LEQARS----MYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSA 394
Query: 208 MFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG 267
M G+ L+ A+ L++ ME G+ PN VT+ LL + G + E F+ M
Sbjct: 395 MIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHK 454
Query: 268 IEVGAEAIAVVLSVCADLAA-DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV- 325
I + A V+ + D +VI ++ G V V AL+ KH V++
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG----VTVWGALLSACKKHRHVELG 510
Query: 326 ---AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
AQ LFS I+ N + L YA A L D EV
Sbjct: 511 EYAAQQLFS-IDPSNTGHYVQLSNLYAAARLWDRVAEV 547
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 358 bits (920), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 215/728 (29%), Positives = 367/728 (50%), Gaps = 114/728 (15%)
Query: 37 LLQQC---KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+LQ C K++ K+V N + G + L +++ +Y G L +A VF+ +
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIE- 158
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+L WN ++ +G + ++ L+ KM GV D +TF V ++ + S
Sbjct: 159 --KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH---- 212
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H +L+ GF + N L+ Y K ++ + K+FD++ ++ ISWN + +G+
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTS------------------------------- 242
N + L +F +M + G+E + T S
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 243 ----LLSSHARCGRLE-------------------------------ETMDLFDMMRKRG 267
LL +++CG L+ E + LF+ M + G
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQ 327
I + VL+ CA GK +H ++ + +FV NAL+ +Y K G ++ A+
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAE 452
Query: 328 NLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAF 387
+FSE+ K+I+SWN +I Y++ +EA+ +F+ L
Sbjct: 453 LVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL----------------------- 489
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
++ + + T++ +L CA +A + GREIHG+++R +
Sbjct: 490 ---------------LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
V N L++MY KCG L H++F+ I KDL++W MI+GYGM+G G+ A+A F +M +A
Sbjct: 535 HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
G + D ++FV++L ACSH+GLV+EG R F++M E +IEP +EHYAC+VD+L R G L +
Sbjct: 595 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIK 654
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAA 627
A ++NMP+ P+A +WG LL CR+H + +AE +A ++F L E TG Y+L++NIYA
Sbjct: 655 AYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAE 714
Query: 628 SGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQ 687
+ +WE ++R +GL+K G SWIE+K ++++F +G+S + +N+ L ++ +
Sbjct: 715 AEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRAR 774
Query: 688 MENKGCVP 695
M +G P
Sbjct: 775 MIEEGYSP 782
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 195/450 (43%), Gaps = 78/450 (17%)
Query: 22 SIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFD 81
S + ++ C +++H +Q+H ++ +G + +++ Y + R+
Sbjct: 189 SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDS 248
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
AR VF+ + + WNSI+ VSNGL E L ++V+M G+ D T V
Sbjct: 249 ARKVFDEMT---ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
C R S G+ VH+ ++ F N L+ MY+K G + + +F ++ ++
Sbjct: 306 C---ADSRL-ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS--------------- 246
+S+ M +G+A A++LF+ ME EG+ P+ T T++L+
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
Query: 247 --------------------HARCGRLEETMDLFDMMRKRGI------------------ 268
+A+CG ++E +F MR + I
Sbjct: 422 WIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANE 481
Query: 269 --------------EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALI 314
+A VL CA L+A G+ IHG++++ G+ V N+L+
Sbjct: 482 ALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLV 541
Query: 315 CVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER 374
+Y K G + +A LF +I K++VSW +I Y G EA+ +F+Q+ + +E
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQ---AGIE- 597
Query: 375 PNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
+ IS+ +++ A + +G +E F M+
Sbjct: 598 ADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 194/433 (44%), Gaps = 46/433 (10%)
Query: 42 KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWN 101
+ + + K+VH + F++ ++ +YA+ G + +A VF + WN
Sbjct: 411 RLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV---KDIISWN 467
Query: 102 SILRVNVSNGLYENALKLY-VKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHN 160
+I+ N AL L+ + + + D T V+ AC + +F G+ +H
Sbjct: 468 TIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF----DKGREIHG 523
Query: 161 HVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDG 220
++++ G+ + H+ N L+ MYAK G + + LFD + K+ +SW +M +G+ ++
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 583
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAEAIAVVL 279
A+ LF +M G+E + +++ SLL + + G ++E F++MR IE E A ++
Sbjct: 584 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 643
Query: 280 SVCADLAADHMGKVI--HGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS---EIE 334
+ A G +I + F+ + AL+C H DVK+A+ + E+E
Sbjct: 644 DMLA-----RTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELE 698
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNV-ISWSAVIG------AF 387
+N + + YAEA E E +L K G R N SW + G A
Sbjct: 699 PENTGYYVLMANIYAEA----EKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAG 754
Query: 388 ASNGRGEEALDLFRKMQLAKVVA---NSVTISGLL---------SVCAESA----ALNIG 431
S+ E ++ F + A+++ + +T L+ ++C S AL I
Sbjct: 755 DSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGII 814
Query: 432 REIHGHVVRVSMN 444
HG ++RV+ N
Sbjct: 815 SSGHGKIIRVTKN 827
>sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protein At1g71490
OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1
Length = 681
Score = 358 bits (918), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 204/646 (31%), Positives = 335/646 (51%), Gaps = 48/646 (7%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
QVH I +G + L ++++ Y+ F +A+++ E + L WN ++
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI---LHPLPWNVLIASYA 120
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
N L+E + Y +M G+ D FT+P V++AC +FG++VH + ++
Sbjct: 121 KNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKAC----GETLDVAFGRVVHGSIEVSSYK 176
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
++++ N LI MY + M + +LFD++ ++ +SWN + + +A A ELF +M
Sbjct: 177 SSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKM 236
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
G+E + +TW + + G + L MR + A+ + L C+ + A
Sbjct: 237 WFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAI 296
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+GK IHG I ++ V+N LI +Y K D++ A +F + E
Sbjct: 297 RLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTE-------------- 342
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
E LC +W+++I +A + EEA L R+M +A
Sbjct: 343 -ENSLC------------------------TWNSIISGYAQLNKSEEASHLLREMLVAGF 377
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN-ILVQNGLLNMYMKCGCLEEGH 467
NS+T++ +L +CA A L G+E H +++R K+ ++ N L+++Y K G +
Sbjct: 378 QPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAK 437
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
V + + K+D +T+ S+I GYG G G ALA F+EM +G KPD V VAVLSACSH+
Sbjct: 438 QVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSK 497
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
LV+EG R+F M E+ I P ++H++CMVDL GRAG L +A DI+ NMP +P+ W TL
Sbjct: 498 LVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATL 557
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
LN+C +H NT + + A ++ + E G Y+L++N+YAA+G W A+VR + G+K
Sbjct: 558 LNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVK 617
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL-ALQMENKG 692
K G +WI+ +FS G++ + N +L+ L L +N G
Sbjct: 618 KDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAG 663
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 199/420 (47%), Gaps = 39/420 (9%)
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
F G VH H + G + + +V +L+ Y+ +++ + + + + + WN++ +
Sbjct: 59 FLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIAS 118
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+A N + + +KRM +G+ P+ T+ S+L + CG ET+D+
Sbjct: 119 YAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKA---CG---ETLDV------------ 160
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
G+V+HG + ++ ++V NALI +Y + ++ +A+ LF
Sbjct: 161 -----------------AFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFD 203
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
+ E++ VSWNA+I YA G+ EA E+F ++ S +VI+W+ + G G
Sbjct: 204 RMFERDAVSWNAVINCYASEGMWSEAFELFDKM----WFSGVEVSVITWNIISGGCLQTG 259
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
AL L +M+ + V + L C+ A+ +G+EIHG + S + V+N
Sbjct: 260 NYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRN 319
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L+ MY KC L +VF Q E+ L TWNS+ISGY E A EM+ AGF+P
Sbjct: 320 TLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQP 379
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
+ + ++L C+ + G+ ++R + + +VD+ ++G + A +
Sbjct: 380 NSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQV 439
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 122/289 (42%), Gaps = 47/289 (16%)
Query: 244 LSSHARCGRLEETMDLFDMMRKRGIEVGAEAI-----AVVLSVCADLAADHMGKVIHGFV 298
L+SH G L + F ++R + ++ + A +LS C D+ A G +H
Sbjct: 13 LASH---GHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHC 69
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
I G E + V V + L+T Y+ L +EA
Sbjct: 70 ISSGVE---------------YHSVLVPK----------------LVTFYSAFNLHNEAQ 98
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
+ + L + + W+ +I ++A N EE + +++M + ++ T +
Sbjct: 99 SIIENSDIL--------HPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSV 150
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
L C E+ + GR +HG + S ++ V N L++MY + + +F+++ ++D
Sbjct: 151 LKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDA 210
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
++WN++I+ Y G+ A F++M +G + + + + C G
Sbjct: 211 VSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 5/157 (3%)
Query: 384 IGAFASNGRGEEALDLFR--KMQLAKVVANSVTI---SGLLSVCAESAALNIGREIHGHV 438
+G AS+G +A F ++Q + V++ + + + LLS C + A G ++H H
Sbjct: 10 LGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHC 69
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
+ + + ++ L+ Y E + E + + WN +I+ Y N L E +
Sbjct: 70 ISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVI 129
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
A ++ M+ G +PD + +VL AC V GR +
Sbjct: 130 AAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVV 166
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 357 bits (915), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/672 (30%), Positives = 346/672 (51%), Gaps = 51/672 (7%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIY-ARFG-RLFDARNVFETAPF 91
F +L CKT Q KQ+H+Q I G + ++ + +R G + A +F P
Sbjct: 37 FISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIP- 95
Query: 92 DCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR 151
+ ++WN++++ ++LY+ M K GV D TFP ++ K G
Sbjct: 96 --EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGG---A 150
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
+ G+ +H HV++ G N+++ N L+ MY+ G M + +FD+ ++ SWN+M SG
Sbjct: 151 LACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISG 210
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+ RM+ EE+++L M + +
Sbjct: 211 -------------YNRMK----------------------EYEESIELLVEMERNLVSPT 235
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
+ + +VLS C+ + + K +H +V + E + ++NAL+ Y G++ +A +F
Sbjct: 236 SVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFR 295
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNG 391
++ ++++SW +++ Y E G A F Q+ D ISW+ +I + G
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDR--------ISWTIMIDGYLRAG 347
Query: 392 RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQN 451
E+L++FR+MQ A ++ + T+ +L+ CA +L IG I ++ + + +++V N
Sbjct: 348 CFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGN 407
Query: 452 GLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKP 511
L++MY KCGC E+ VF ++++D TW +M+ G NG G+ A+ F +M + +P
Sbjct: 408 ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQP 467
Query: 512 DGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDI 571
D + ++ VLSAC+H+G+V++ R+ F M + RIEP + HY CMVD+LGRAGL++EA +I
Sbjct: 468 DDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEI 527
Query: 572 VKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRW 631
++ MPM PN+ VWG LL + R+H + +AE A +I L + Y LL NIYA RW
Sbjct: 528 LRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRW 587
Query: 632 EDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENK 691
+D +VR +KK G S IEV H F +G+ + + LEELA +
Sbjct: 588 KDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFA 647
Query: 692 GCVPDNDIILWE 703
+PD +L+E
Sbjct: 648 AYLPDTSELLFE 659
>sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protein At1g19720
OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1
Length = 894
Score = 356 bits (913), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 225/764 (29%), Positives = 372/764 (48%), Gaps = 108/764 (14%)
Query: 17 PSRPFSIITYNNSLLDC---FDHLLQQ------------------CKTIHQLKQVHNQLI 55
P F + N SLL+ D L QQ +IH + +H +
Sbjct: 49 PDEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFG 108
Query: 56 VTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYEN 115
+ F+ ++LS+YA+ G + DAR VF++ + + W++++ +
Sbjct: 109 LF-TEPDVFVETKLLSMYAKCGCIADARKVFDSMR---ERNLFTWSAMIGAYSRENRWRE 164
Query: 116 ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVN 175
KL+ M K GVL D F FP +++ C G G+++H+ V+++G + + N
Sbjct: 165 VAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEA----GKVIHSVVIKLGMSSCLRVSN 220
Query: 176 ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
++ +YAK G++ + K F ++R ++ I+WN + + N + A+EL K ME EG+ P
Sbjct: 221 SILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISP 280
Query: 236 NFVTWTSLLSSHARCGRLEETMDL--------------------------------FDMM 263
VTW L+ + + G+ + MDL DM
Sbjct: 281 GLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMF 340
Query: 264 RK---RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH 320
RK G+ A I +S C+ L + G +H +K GF D V V N+L+ +Y K
Sbjct: 341 RKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKC 400
Query: 321 GDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW 380
G ++ A+ +F ++ K++ +WN++IT Y +AG C +A E+F++++ + RPN+I+W
Sbjct: 401 GKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDAN----LRPNIITW 456
Query: 381 SA------------------------------------VIGAFASNGRGEEALDLFRKMQ 404
+ +I + NG+ +EAL+LFRKMQ
Sbjct: 457 NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Query: 405 LAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLE 464
++ + NSVTI LL CA + REIHG V+R +++ V+N L + Y K G +E
Sbjct: 517 FSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIE 576
Query: 465 EGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS 524
+F +E KD+ITWNS+I GY ++G ALA F +M G P+ +++ A
Sbjct: 577 YSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHG 636
Query: 525 HAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVW 584
G V+EG+++F + ++ I P +EH + MV L GRA L+EA ++ M ++ +W
Sbjct: 637 LMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIW 696
Query: 585 GTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTK 644
+ L CR+H + D+A A +F L E T + ++S IYA + + + +
Sbjct: 697 ESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDN 756
Query: 645 GLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
LKK GQSWIEV+ IH F++G+ QS L +VL L +M
Sbjct: 757 LLKKPLGQSWIEVRNLIHTFTTGD--QSKL--CTDVLYPLVEKM 796
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 355 bits (910), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 224/738 (30%), Positives = 366/738 (49%), Gaps = 105/738 (14%)
Query: 27 NNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVF 86
N+ LD F ++ +I L Q H Q+I+ G L ++ + G ++ AR++F
Sbjct: 20 KNTYLDFF----KRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIF 75
Query: 87 ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVL-GDGFTFPLVIRACKFM 145
+ + L+N ++R N ++L ++ +RK L + T+ I A
Sbjct: 76 LSVQ---RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGF 132
Query: 146 GSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISW 205
R G+++H + G + + + ++ MY K ++ D+ K+FD++ K+ I W
Sbjct: 133 RDDRA----GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILW 188
Query: 206 NMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
N M SG+ N ++++F+ + E C RL+ T L D
Sbjct: 189 NTMISGYRKNEMYVESIQVFRDLINES-----------------CTRLD-TTTLLD---- 226
Query: 266 RGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
+L A+L +G IH K G + +V I +Y K G +K+
Sbjct: 227 ------------ILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKM 274
Query: 326 AQNLFSEIEEKNIVSWNALI---TS----------------------------------- 347
LF E + +IV++NA+I TS
Sbjct: 275 GSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH 334
Query: 348 ----YAEAGLCDEA------------VEVFSQLEKLDGGSM---ERP--NVISWSAVIGA 386
YA G C ++ V+S+L +++ E P ++ SW+A+I
Sbjct: 335 LMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 387 FASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKN 446
+ NG E+A+ LFR+MQ ++ N VTI+ +LS CA+ AL++G+ +H V +
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 447 ILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE 506
I V L+ MY KCG + E +F+ + KK+ +TWN+MISGYG++G G+ AL F EM+
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 507 AGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQ 566
+G P V F+ VL ACSHAGLV EG IF+ M+ + EP ++HYACMVD+LGRAG LQ
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 567 EASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYA 626
A ++ M +EP + VW TLL +CR+HK+T++A ++ ++F L + G ++LLSNI++
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634
Query: 627 ASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELAL 686
A + AA VR +AK + L K G + IE+ H+F+SG+ +K + E LE+L
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEG 694
Query: 687 QMENKGCVPDNDIILWEM 704
+M G P+ ++ L ++
Sbjct: 695 KMREAGYQPETELALHDV 712
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 352 bits (904), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 202/625 (32%), Positives = 331/625 (52%), Gaps = 87/625 (13%)
Query: 76 FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
F R D +VF WNS++ +G AL + MRKL + +F
Sbjct: 32 FNRYVDKTDVFS------------WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSF 79
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
P I+AC + F G+ H G+Q ++ + + LI MY+ G++ D+ K+FD
Sbjct: 80 PCAIKACSSL----FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFD 135
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ +N +SW M G+ LN + A+ LFK + ++ + ++
Sbjct: 136 EIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDD------------------DD 177
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
M L M + V+S C+ + A + + IH FVIK GF+ V V N L+
Sbjct: 178 AMFLDSM-----------GLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLD 226
Query: 316 VYGKHGD--VKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
Y K G+ V VA+ +F +I +K
Sbjct: 227 AYAKGGEGGVAVARKIFDQIVDK------------------------------------- 249
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA-NSVTISGLLSVCAESAALNIGR 432
+ +S+++++ +A +G EA ++FR++ KVV N++T+S +L + S AL IG+
Sbjct: 250 --DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK 307
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
IH V+R+ + +++V +++MY KCG +E F++++ K++ +W +MI+GYGM+G
Sbjct: 308 CIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHG 367
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
AL F MI++G +P+ + FV+VL+ACSHAGL EG R F+ M F +EP +EHY
Sbjct: 368 HAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY 427
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
CMVDLLGRAG LQ+A D+++ M M+P++ +W +LL +CR+HKN ++AE +++F L +
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDS 487
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
G YMLLS+IYA +GRW+D +VR+ K +GL K G S +E+ ++H+F G+
Sbjct: 488 SNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHP 547
Query: 673 DLKNVCEVLEELALQMENKGCVPDN 697
+ + E L EL ++ G V +
Sbjct: 548 QREKIYEFLAELNRKLLEAGYVSNT 572
Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 178/383 (46%), Gaps = 58/383 (15%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F ++ C ++ + KQ H Q V G + F+++ ++ +Y+ G+L DAR VF+ P
Sbjct: 79 FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKM------RKLGVLGDGFTFPLVIRACKF 144
K + + W S++R NG +A+ L+ + + D VI AC
Sbjct: 139 ---KRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSR 195
Query: 145 MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQ--MSDSFKLFDKVRVKNY 202
+ + + +H+ V++ GF V + N L+ YAK G+ ++ + K+FD++ K+
Sbjct: 196 VPA----KGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR 251
Query: 203 ISWNMMFSGFALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
+S+N + S +A + + A E+F+R+ + + + N +T +++L + + G L + D
Sbjct: 252 VSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHD 311
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
+ + G+E D V V ++I +Y K G
Sbjct: 312 QVIRMGLE-----------------------------------DDVIVGTSIIDMYCKCG 336
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
V+ A+ F ++ KN+ SW A+I Y G +A+E+F + +D G RPN I++
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM--IDSGV--RPNYITFV 392
Query: 382 AVIGAFASNGRGEEALDLFRKMQ 404
+V+ A + G E F M+
Sbjct: 393 SVLAACSHAGLHVEGWRWFNAMK 415
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 119/230 (51%), Gaps = 11/230 (4%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGR--LFDARNVFETAPFDCKSSSLLWNSILR 105
+ +H+ +I G + + +L YA+ G + AR +F+ + +NSI+
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQI---VDKDRVSYNSIMS 259
Query: 106 VNVSNGLYENALKLYVKMRKLGVLG-DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
V +G+ A +++ ++ K V+ + T V+ A G+ R G+ +H+ V++
Sbjct: 260 VYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRI----GKCIHDQVIR 315
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
MG + +V + +I MY K G++ + K FD+++ KN SW M +G+ ++ ALEL
Sbjct: 316 MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALEL 375
Query: 225 FKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKR-GIEVGAE 273
F M G+ PN++T+ S+L++ + G E F+ M+ R G+E G E
Sbjct: 376 FPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLE 425
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 350 bits (898), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 207/687 (30%), Positives = 362/687 (52%), Gaps = 88/687 (12%)
Query: 19 RPFSIITYNNSLLD---CFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYAR 75
R FS+ ++ L F +L+ C+T+ ++H + G ++AA ++ +Y+R
Sbjct: 138 RCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSR 197
Query: 76 FGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTF 135
+ + +AR +F+ P S WN+++ +G + AL L +R + D T
Sbjct: 198 YKAVGNARILFDEMPVRDMGS---WNAMISGYCQSGNAKEALTLSNGLRAM----DSVTV 250
Query: 136 PLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFD 195
++ AC G F + G +H++ ++ G + + + N+LI +YA+ G++ D K+FD
Sbjct: 251 VSLLSACTEAGDF----NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFD 306
Query: 196 KVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEE 255
++ V++ ISWN + + LN A+ LF+ M L ++P+ +T SL
Sbjct: 307 RMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL------------ 354
Query: 256 TMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALIC 315
A +LS D+ A + + GF ++ G+ F++
Sbjct: 355 --------------------ASILSQLGDIRA---CRSVQGFTLRKGW----FLE----- 382
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERP 375
D+ + NA++ YA+ GL D A VF+ L D
Sbjct: 383 ------DITIG---------------NAVVVMYAKLGLVDSARAVFNWLPNTD------- 414
Query: 376 NVISWSAVIGAFASNGRGEEALDLFRKMQL-AKVVANSVTISGLLSVCAESAALNIGREI 434
VISW+ +I +A NG EA++++ M+ ++ AN T +L C+++ AL G ++
Sbjct: 415 -VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 435 HGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLG 494
HG +++ + ++ V L +MY KCG LE+ +F QI + + + WN++I+ +G +G G
Sbjct: 474 HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHG 533
Query: 495 ENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYAC 554
E A+ F+EM++ G KPD + FV +LSACSH+GLV+EG+ F+MM ++ I P ++HY C
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC 593
Query: 555 MVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITET 614
MVD+ GRAG L+ A +K+M ++P+A +WG LL++CR+H N D+ + + +F + E
Sbjct: 594 MVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEH 653
Query: 615 TGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDL 674
G ++LLSN+YA++G+WE ++R A KGL+K G S +EV K+ +F +GN
Sbjct: 654 VGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMY 713
Query: 675 KNVCEVLEELALQMENKGCVPDNDIIL 701
+ + L L +++ G VPD+ +L
Sbjct: 714 EEMYRELTALQAKLKMIGYVPDHRFVL 740
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/493 (22%), Positives = 210/493 (42%), Gaps = 103/493 (20%)
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
NV I +L+ +Y +G ++ + FD ++ ++ +WN+M SG+ + + F
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 230 L-EGLEPNFVTWTSLLSS--------------------------------HARCGRLEET 256
L GL P++ T+ S+L + ++R +
Sbjct: 145 LSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 257 MDLFDMMRKRGI-----------EVGAEAIAVVLS----------------VCADLAADH 289
LFD M R + + G A+ LS C + +
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFN 264
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
G IH + IK G E +FV N LI +Y + G ++ Q +F + ++++SWN++I +Y
Sbjct: 265 RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY- 323
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+L+ E+P A+ LF++M+L+++
Sbjct: 324 ----------------ELN----EQP------------------LRAISLFQEMRLSRIQ 345
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVS-MNKNILVQNGLLNMYMKCGCLEEGHL 468
+ +T+ L S+ ++ + R + G +R ++I + N ++ MY K G ++
Sbjct: 346 PDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARA 405
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG-FKPDGVAFVAVLSACSHAG 527
VF + D+I+WN++ISGY NG A+ + M E G + +V+VL ACS AG
Sbjct: 406 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 465
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
+ +G ++ +++ + + + D+ G+ G L++A + +P N+ W TL
Sbjct: 466 ALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTL 523
Query: 588 LNSCRMHKNTDVA 600
+ H + + A
Sbjct: 524 IACHGFHGHGEKA 536
Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/373 (20%), Positives = 154/373 (41%), Gaps = 60/373 (16%)
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
+ + + C +L + K +H ++ V + L+ +Y G+V +A++ F
Sbjct: 55 DDVHTLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDH 111
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMER---PNVIS---------- 379
I+ +++ +WN +I+ Y AG E + FS G + + P+V+
Sbjct: 112 IQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNK 171
Query: 380 -----------WSAVIGA-----FASNGRGEEALDLFRKMQLAKVVANSVTISG------ 417
W + A ++ A LF +M + + + + ISG
Sbjct: 172 IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGN 231
Query: 418 ---------------------LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
LLS C E+ N G IH + ++ + + V N L+++
Sbjct: 232 AKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y + G L + VF+++ +DLI+WNS+I Y +N A++ F+EM + +PD +
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
+++ S S G + R + +R+ + +V + + GL+ A + +P
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 577 MEPNAYVWGTLLN 589
+ W T+++
Sbjct: 412 -NTDVISWNTIIS 423
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 346 bits (888), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 207/696 (29%), Positives = 362/696 (52%), Gaps = 92/696 (13%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
+H+ ++ G +++AF+ A +++ Y+ G + AR VFE CK ++W I+ V
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEG--ILCKDI-VVWAGIVSCYVE 224
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
NG +E++LKL MR G + + +TF ++A +G+F F + VH +L+ +
Sbjct: 225 NGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAF----DFAKGVHGQILKTCYVL 280
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRME 229
+ + L+ +Y ++G MSD+FK+F+++ + + W+ M + F N C+
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN---------- 330
Query: 230 LEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADH 289
E +DLF MR+ + ++ +L+ CA
Sbjct: 331 -------------------------EAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSG 365
Query: 290 MGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA 349
+G+ +HG V+K GF+ ++V NALI V YA
Sbjct: 366 LGEQLHGLVVKVGFDLDIYVSNALIDV-------------------------------YA 394
Query: 350 EAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+ D AV++F++L N +SW+ VI + + G G +A +FR+ +V
Sbjct: 395 KCEKMDTAVKLFAELSS--------KNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVS 446
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
VT S L CA A++++G ++HG ++ + K + V N L++MY KCG ++ V
Sbjct: 447 VTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSV 506
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLV 529
F ++E D+ +WN++ISGY +GLG AL + M + KP+G+ F+ VLS CS+AGL+
Sbjct: 507 FNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLI 566
Query: 530 NEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLN 589
++G+ F+ M+R+ IEP +EHY CMV LLGR+G L +A +++ +P EP+ +W +L+
Sbjct: 567 DQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLS 626
Query: 590 SCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKV 649
+ N + A A +I + + +Y+L+SN+YA + +W + A +R S K G+KK
Sbjct: 627 ASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKE 686
Query: 650 AGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGKKN 709
G SWIE + +H FS G S D+K + +LE L ++ G VPD + +L +M ++
Sbjct: 687 PGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEK 746
Query: 710 VKRIQRIRADNI----------KSKHRIVGFRNLKL 735
KR+ + ++ + S++RI+ +NL++
Sbjct: 747 DKRLW-VHSERLALAYGLVRMPSSRNRILIMKNLRI 781
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 151/385 (39%), Gaps = 85/385 (22%)
Query: 291 GKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAE 350
K IH ++K G +F N L+ Y K G K A NLF E+ E+N VS+ L YA
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA- 126
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
C + + ++S+L + G P+V + L LF + A++
Sbjct: 127 ---CQDPIGLYSRLHR--EGHELNPHVFT---------------SFLKLFVSLDKAEICP 166
Query: 411 NSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVF 470
+H +V++ + N V L+N Y CG ++ VF
Sbjct: 167 ----------------------WLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVF 204
Query: 471 EQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVN 530
E I KD++ W ++S Y NG E++L M AGF P+ F L A G +
Sbjct: 205 EGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFD 264
Query: 531 EGRRIFDMMVRE-------------------------FRIEPQMEH-----YACMVDLLG 560
+ + +++ F++ +M ++ M+
Sbjct: 265 FAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFC 324
Query: 561 RAGLLQEASDIVKNMP---MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
+ G EA D+ M + PN + ++LN C + K + + E Q+ GL+ +
Sbjct: 325 QNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE----QLHGLVVKVGFD 380
Query: 618 YML-----LSNIYAASGRWEDAAKV 637
+ L ++YA + + A K+
Sbjct: 381 LDIYVSNALIDVYAKCEKMDTAVKL 405
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 345 bits (886), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 225/757 (29%), Positives = 382/757 (50%), Gaps = 101/757 (13%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFG---RLFDARNVFETAPFDCK 94
L+ CKTI +LK H L G + ++++ G L A+ VFE + +
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS--ESY 96
Query: 95 SSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSF 154
+ ++NS++R S+GL A+ L+++M G+ D +TFP + AC R + +
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSAC---AKSRAKGNG 153
Query: 155 GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFAL 214
QI H +++MG+ ++ + N L+ YA+ G++ + K+FD++ +N +SW M G+A
Sbjct: 154 IQI-HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 215 NFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
A++LF RM E + PN VT ++S+ A+ LE ++ +R GIEV
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDY----VFVKNALICVYGKHGDVKVAQNL 329
++ ++ + A + K + F++Y + + NA+ Y + G + A +
Sbjct: 273 MVSALVDMYMKCNAIDVAKRL--------FDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 330 FSEIEE--------------------KNIV---------------SW----NALITSYAE 350
F+ + + +NI+ SW NALI Y +
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMK 384
Query: 351 AGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVA 410
D A +F + M V++W++++ + NG + A + F M +V+
Sbjct: 385 CHRQDTAFRIFDR--------MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVS 436
Query: 411 NSVTISGLL--------------------------------SVCAESAALNIGREIHGHV 438
+ ISGL+ S C AL++ + I+ ++
Sbjct: 437 WNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYI 496
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
+ + ++ + L++M+ +CG E +F + +D+ W + I M G E A+
Sbjct: 497 EKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAI 556
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDL 558
F++MIE G KPDGVAFV L+ACSH GLV +G+ IF M++ + P+ HY CMVDL
Sbjct: 557 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 616
Query: 559 LGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSY 618
LGRAGLL+EA ++++MPMEPN +W +LL +CR+ N ++A A +I L E TGSY
Sbjct: 617 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 676
Query: 619 MLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVC 678
+LLSN+YA++GRW D AKVR+S K KGL+K G S I+++ K H F+SG+ ++ N+
Sbjct: 677 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIE 736
Query: 679 EVLEELALQMENKGCVPDNDIILWEMMGKKNVKRIQR 715
+L+E++ + + G VPD +L ++ K+ + + R
Sbjct: 737 AMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSR 773
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 192/436 (44%), Gaps = 55/436 (12%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR 83
+T N+ + C + + + ++V+ + +G + + + ++ +Y + + A+
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 84 NVFETAPFDCKSSSL-LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRAC 142
+F+ + +S+L L N++ V GL AL ++ M GV D + I +C
Sbjct: 292 RLFD----EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ + + G+ H +VL+ GF+ +I N LI MY K + +F++FD++ K
Sbjct: 348 SQLRNILW----GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTV 403
Query: 203 ISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLF-D 261
++WN + +G+ N + D A E F+ M E N V+W +++S + EE +++F
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMP----EKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
M + G+ + + S C L A + K I+ ++ K G + V + L+ ++ + G
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 322 DVKVAQNLFSEIEEKNIVSWN-----------------------------------ALIT 346
D + A ++F+ + +++ +W +T
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 347 SYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLA 406
+ + GL + E+F + KL G S P + + ++ G EEA+ L M +
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVS---PEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 407 KVVANSVTISGLLSVC 422
N V + LL+ C
Sbjct: 637 ---PNDVIWNSLLAAC 649
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 345 bits (884), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 200/660 (30%), Positives = 349/660 (52%), Gaps = 64/660 (9%)
Query: 4 SLLHQPHQFSPSNPSRPFSIITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASA 63
SL H H+ P N + S + +N L LL++CK + LKQ+ Q+I+ G
Sbjct: 33 SLPH--HRDKPINWNSTHSFVLHNPLL-----SLLEKCKLLLHLKQIQAQMIINGLILDP 85
Query: 64 FLAARVLSIYARFGRLFDARNVFETAPF--DCKSSSLL-WNSILRVNVSNGLYENALKLY 120
F ++R+++ F L ++R + + ++ ++ WN +R + + + LY
Sbjct: 86 FASSRLIA----FCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLY 141
Query: 121 VKMRKLGVL---GDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNEL 177
+M + G D FT+P++ + C R S G ++ HVL++ + H+ N
Sbjct: 142 KQMLRHGCCESRPDHFTYPVLFKVC---ADLRLS-SLGHMILGHVLKLRLELVSHVHNAS 197
Query: 178 IGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNF 237
I M+A G M ++ K+FD+ V++
Sbjct: 198 IHMFASCGDMENARKVFDESPVRD-----------------------------------L 222
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
V+W L++ + + G E+ + ++ +M G++ + ++S C+ L + GK + +
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 298 VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
V + G + + NAL+ ++ K GD+ A+ +F +E++ IVSW +I+ YA GL D +
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 358 VEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISG 417
++F +E+ D V+ W+A+IG RG++AL LF++MQ + + +T+
Sbjct: 343 RKLFDDMEEKD--------VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIH 394
Query: 418 LLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKD 477
LS C++ AL++G IH ++ + S++ N+ + L++MY KCG + E VF I+ ++
Sbjct: 395 CLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRN 454
Query: 478 LITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFD 537
+T+ ++I G ++G A++ F EMI+AG PD + F+ +LSAC H G++ GR F
Sbjct: 455 SLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFS 514
Query: 538 MMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNT 597
M F + PQ++HY+ MVDLLGRAGLL+EA ++++MPME +A VWG LL CRMH N
Sbjct: 515 QMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNV 574
Query: 598 DVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
++ E A ++ L +G Y+LL +Y + WEDA + R +G++K+ G S IEV
Sbjct: 575 ELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEV 634
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 344 bits (883), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 216/694 (31%), Positives = 346/694 (49%), Gaps = 111/694 (15%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGAN-ASAFLAARVLSIYARFGRLFDARNVFETA 89
F LL+ C L + +H L+ +S+ + + +YA + AR+VF+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
P + + + W+ ++R SN E AL LY KM GV +T+P V++AC + +
Sbjct: 62 PHP-RINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI- 119
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+++H+HV F ++++ L+ YAK G++ + K+FD++ ++ ++WN M
Sbjct: 120 ---DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMI 176
Query: 210 SGFALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGI 268
SGF+L+ + LF M ++GL PN T + + R G L E
Sbjct: 177 SGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALRE------------- 223
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
GK +HG+ + GF + + VK ++ VY K + A+
Sbjct: 224 ----------------------GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARR 261
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISW-------- 380
+F +KN V+W+A+I Y E + EA EVF Q+ D +M P I
Sbjct: 262 VFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARF 321
Query: 381 -------------------------SAVIGAFASNGRGEEALDLFRKMQLAKVVA-NSV- 413
+ +I +A G +A F ++ L V++ NS+
Sbjct: 322 GDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLI 381
Query: 414 -----------------------------TISGLLSVCAESAALNIGREIHGHVVRVSMN 444
T+ G+L+ C+ AAL G HG+ V
Sbjct: 382 TGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYA 441
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
N + N L++MY KCG L+ VF+ + K+D+++WN+M+ G+G++GLG+ AL+ F M
Sbjct: 442 VNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSM 501
Query: 505 IEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR-EFRIEPQMEHYACMVDLLGRAG 563
E G PD V +A+LSACSH+GLV+EG+++F+ M R +F + P+++HY CM DLL RAG
Sbjct: 502 QETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAG 561
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSN 623
L EA D V MP EP+ V GTLL++C +KN ++ ++ ++ L ETT S +LLSN
Sbjct: 562 YLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GETTESLVLLSN 620
Query: 624 IYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEV 657
Y+A+ RWEDAA++R+ K +GL K G SW++V
Sbjct: 621 TYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 342 bits (878), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 203/665 (30%), Positives = 339/665 (50%), Gaps = 108/665 (16%)
Query: 78 RLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPL 137
+LFD N K+ + LWN +++ S GLY A++ Y +M GV D FT+P
Sbjct: 85 QLFDEMN---------KADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPF 135
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
VI++ + S G+ +H V+++GF +V++ N LI +Y K+G D+ K+F+++
Sbjct: 136 VIKSVAGISSLEE----GKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
++ +SWN M SG+ D +L LFK M G +P
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKP---------------------- 229
Query: 258 DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFED-YVFVKNALICV 316
D F M L C+ + + MGK IH ++ E V V +++ +
Sbjct: 230 DRFSTMS-------------ALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDM 276
Query: 317 YGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEK---------- 366
Y K+G+V A+ +F+ + ++NIV+WN +I YA G +A F ++ +
Sbjct: 277 YSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVIT 336
Query: 367 ---------------LDGGSMER---PNVISWSAVIGAFASNG----------------- 391
+ G +M R P+++ +A+I + G
Sbjct: 337 SINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNV 396
Query: 392 --------------RGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGH 437
+ AL+LF+++ + +V +S TI+ +L AES +L+ GREIH +
Sbjct: 397 ISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAY 456
Query: 438 VVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENA 497
+V+ N ++ N L++MY CG LE+ F I KD+++WNS+I Y ++G G +
Sbjct: 457 IVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRIS 516
Query: 498 LATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVD 557
+ F EMI + P+ F ++L+ACS +G+V+EG F+ M RE+ I+P +EHY CM+D
Sbjct: 517 VWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLD 576
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGS 617
L+GR G A ++ MP P A +WG+LLN+ R HK+ +AE A QIF + + TG
Sbjct: 577 LIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGC 636
Query: 618 YMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
Y+LL N+YA +GRWED ++++ ++KG+ + + +S +E K K H+F++G+ +
Sbjct: 637 YVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKI 696
Query: 678 CEVLE 682
EVL+
Sbjct: 697 YEVLD 701
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 132/242 (54%), Gaps = 11/242 (4%)
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
+A++ L ++A+++F ++ K D W+ +I F S G EA+ + +M A
Sbjct: 74 FADSRLMEDALQLFDEMNKADA--------FLWNVMIKGFTSCGLYIEAVQFYSRMVFAG 125
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
V A++ T ++ A ++L G++IH V+++ ++ V N L+++YMK GC +
Sbjct: 126 VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAE 185
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
VFE++ ++D+++WNSMISGY G G ++L F+EM++ GFKPD + ++ L ACSH
Sbjct: 186 KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVY 245
Query: 528 LVNEGRRIFDMMVREFRIEP-QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
G+ I VR RIE + ++D+ + G + A I M ++ N W
Sbjct: 246 SPKMGKEIHCHAVRS-RIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNV 303
Query: 587 LL 588
++
Sbjct: 304 MI 305
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 155/337 (45%), Gaps = 51/337 (15%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKL-G 127
+L +Y+++G + A +F + + + WN ++ NG +A + KM + G
Sbjct: 273 ILDMYSKYGEVSYAERIFNGM---IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNG 329
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
+ D T ++ A + G+ +H + ++ GF ++ + LI MY + GQ+
Sbjct: 330 LQPDVITSINLLPASAILE--------GRTIHGYAMRRGFLPHMVLETALIDMYGECGQL 381
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
+ +FD++ KN ISWN + + + N ALELF+ + L P+ T S+L ++
Sbjct: 382 KSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAY 441
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
A L E G+ IH +++K +
Sbjct: 442 AESLSLSE-----------------------------------GREIHAYIVKSRYWSNT 466
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
+ N+L+ +Y GD++ A+ F+ I K++VSWN++I +YA G +V +FS++
Sbjct: 467 IILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI-- 524
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
S PN ++++++ A + +G +E + F M+
Sbjct: 525 --ASRVNPNKSTFASLLAACSISGMVDEGWEYFESMK 559
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 342 bits (878), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 215/692 (31%), Positives = 345/692 (49%), Gaps = 118/692 (17%)
Query: 75 RFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFT 134
+F DAR +F K S WN++L+ +E L + M + D FT
Sbjct: 6 KFSSSVDARQMFGEM---TKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFT 62
Query: 135 FPLVIRACKFMGSFRFRFSFGQIVHNHVLQ-MGFQGNVHIVNELIGMYAKMGQMSDSFKL 193
P+ ++AC G R ++G+++H V + + ++++ + LI MY K G+M ++ ++
Sbjct: 63 LPVALKAC---GELR-EVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRM 118
Query: 194 FDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMEL-EGLEPNFVTWTSLLSSHARCGR 252
FD++ + ++W+ M SGF N A+E F+RM + + P+ VT +L+S+
Sbjct: 119 FDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSA------ 172
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
C L+ +G+ +HGFVI+ GF + + + N+
Sbjct: 173 -----------------------------CTKLSNSRLGRCVHGFVIRRGFSNDLSLVNS 203
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSM 372
L+ Y K K A NLF I EK+++SW+ +I Y + G EA+ VF+ + +D G+
Sbjct: 204 LLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDM--MDDGT- 260
Query: 373 ERPNVISWSAVIGAFAS-----NGR------------------------------GEEAL 397
PNV + V+ A A+ GR EEA
Sbjct: 261 -EPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 319
Query: 398 DLFRKMQLAKVVANSVTISG--------------------------------LLSVCAES 425
+F ++ VV+ ISG +L C+E
Sbjct: 320 AVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSEL 379
Query: 426 AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMI 485
L + H +V++ + N + L+ +Y +CG L VF I KD + W S+I
Sbjct: 380 GFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLI 439
Query: 486 SGYGMNGLGENALATFEEMIEAG-FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFR 544
+GYG++G G AL TF M+++ KP+ V F+++LSACSHAGL++EG RIF +MV ++R
Sbjct: 440 TGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYR 499
Query: 545 IEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
+ P +EHYA +VDLLGR G L A +I K MP P + GTLL +CR+H+N ++AE +A
Sbjct: 500 LAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVA 559
Query: 605 SQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF 664
++F L + G YML+SN+Y G WE+ K+R S K +G+KK +S IE++RK+H F
Sbjct: 560 KKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRF 619
Query: 665 SSGNSLQSDLKNVCEVLEELALQMEN--KGCV 694
+ + L + + V +L+EL L M+ + CV
Sbjct: 620 VADDELHPEKEPVYGLLKELDLHMKEDLENCV 651
Score = 146 bits (369), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 180/368 (48%), Gaps = 45/368 (12%)
Query: 211 GFALNFDCD-GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
GF F A ++F M L W +LL S +R + EE + F M + +
Sbjct: 2 GFCRKFSSSVDARQMFGEMTKRSL----YQWNTLLKSLSREKQWEEVLYHFSHMFRDEEK 57
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
+ V L C +L + G++IHGFV K DV + +L
Sbjct: 58 PDNFTLPVALKACGELREVNYGEMIHGFVKK---------------------DVTLGSDL 96
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
+ ++LI Y + G EA+ +F +LEK P++++WS+++ F
Sbjct: 97 YV---------GSSLIYMYIKCGRMIEALRMFDELEK--------PDIVTWSSMVSGFEK 139
Query: 390 NGRGEEALDLFRKMQLAK-VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
NG +A++ FR+M +A V + VT+ L+S C + + +GR +HG V+R + ++
Sbjct: 140 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 199
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
+ N LLN Y K +E +F+ I +KD+I+W+++I+ Y NG AL F +M++ G
Sbjct: 200 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 259
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+P+ + VL AC+ A + +GR+ ++ +R+ +E +++ +VD+ + +EA
Sbjct: 260 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEEA 318
Query: 569 SDIVKNMP 576
+ +P
Sbjct: 319 YAVFSRIP 326
Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 111/234 (47%), Gaps = 16/234 (6%)
Query: 37 LLQQCKTIHQLKQ---VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+LQ C H L+Q H I G ++ ++ +Y + +A VF P
Sbjct: 270 VLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP--- 326
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
+ + W +++ NG+ +++ + M L + T P I K +GS
Sbjct: 327 RKDVVSWVALISGFTLNGMAHRSIEEFSIM-----LLENNTRPDAILMVKVLGSCS-ELG 380
Query: 154 F---GQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
F + H++V++ GF N I L+ +Y++ G + ++ K+F+ + +K+ + W + +
Sbjct: 381 FLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLIT 440
Query: 211 GFALNFDCDGALELFKRM-ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
G+ ++ ALE F M + ++PN VT+ S+LS+ + G + E + +F +M
Sbjct: 441 GYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLM 494
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 342 bits (877), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 211/701 (30%), Positives = 351/701 (50%), Gaps = 53/701 (7%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L CK I L+ Q+H ++ G ++ ++ ++S+Y G L A ++F
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ ++ +N+++ G E A++L+ +M G+ D T ++ AC G+ F
Sbjct: 351 ---QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL-F 406
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
R GQ +H + ++GF N I L+ +YAK + + F + V+N + WN+M
Sbjct: 407 R---GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
+ L D + +F++M++E + PN T+ S+L + R G LE + + K ++
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 271 GAEAIAVVLSVCA-----DLAADHM----GK-VIHGFVIKGGFEDYVFVKNALICVY--- 317
A +V++ + A D A D + GK V+ + G+ Y F AL
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 318 --GKHGDVKVAQNLFS------------EIEEKNIVS--------WNALITSYAEAGLCD 355
G D N S +I + VS NAL+T Y+ G +
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
E+ F Q E D I+W+A++ F +G EEAL +F +M + N+ T
Sbjct: 644 ESYLAFEQTEAGDN--------IAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
+ +E+A + G+++H + + + V N L++MY KCG + + F ++
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 476 KDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRI 535
K+ ++WN++I+ Y +G G AL +F++MI + +P+ V V VLSACSH GLV++G
Sbjct: 756 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 536 FDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHK 595
F+ M E+ + P+ EHY C+VD+L RAGLL A + ++ MP++P+A VW TLL++C +HK
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
N ++ E A + L E + +Y+LLSN+YA S +W+ R K KG+KK GQSWI
Sbjct: 876 NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPD 696
EVK IH F G+ + E ++L + G V D
Sbjct: 936 EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQD 976
Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 145/601 (24%), Positives = 270/601 (44%), Gaps = 114/601 (18%)
Query: 37 LLQQC----KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
LL+ C ++ + +++H+Q++ G +++ L+ ++ Y G L+ A VF+ P
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMP-- 147
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ + WN +++ S L L+V+M V + TF V+ AC+ GS F
Sbjct: 148 -ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR-GGSVAFDV 205
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
+ +H +L G + + + N LI +Y++ G + + ++FD +R+K++ SW M SG
Sbjct: 206 V--EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGL 263
Query: 213 ALNFDCDG-ALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
+ N +C+ A+ LF M + G+ P ++S
Sbjct: 264 SKN-ECEAEAIRLFCDMYVLGIMPTPYAFSS----------------------------- 293
Query: 272 AEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFS 331
VLS C + + +G+ +HG V+K GF +V NAL+ +Y G++ A+++FS
Sbjct: 294 ------VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFS 347
Query: 332 EIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG------------------GSME 373
+ +++ V++N LI ++ G ++A+E+F ++ LDG G++
Sbjct: 348 NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH-LDGLEPDSNTLASLVVACSADGTLF 406
Query: 374 RPNVISWSAVIGAFASNGRGEEAL------------------------------------ 397
R + FASN + E AL
Sbjct: 407 RGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYG 466
Query: 398 ---------DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
+FR+MQ+ ++V N T +L C L +G +IH +++ + N
Sbjct: 467 LLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAY 526
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
V + L++MY K G L+ + + KD+++W +MI+GY + AL TF +M++ G
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG 586
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIF-DMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
+ D V +SAC+ + EG++I V F + ++ +V L R G ++E
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN--ALVTLYSRCGKIEE 644
Query: 568 A 568
+
Sbjct: 645 S 645
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/627 (21%), Positives = 269/627 (42%), Gaps = 110/627 (17%)
Query: 34 FDHLLQQCK----TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA 89
F +L+ C+ ++Q+H +++ G S + ++ +Y+R G + AR VF+
Sbjct: 189 FSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL 248
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
SS W +++ N A++L+ M LG++ + F V+ ACK + S
Sbjct: 249 RLKDHSS---WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLE 305
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
G+ +H VL++GF + ++ N L+ +Y +G N IS +F
Sbjct: 306 I----GEQLHGLVLKLGFSSDTYVCNALVSLYFHLG---------------NLISAEHIF 346
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
S + + + VT+ +L++ ++CG E+ M+LF M G+E
Sbjct: 347 SNMS--------------------QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE-----------------------DY 306
+ +A ++ C+ G+ +H + K GF DY
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 307 --------VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIV----SWNALITSYAEAG-- 352
V + N ++ YG D++ + +F +++ + IV ++ +++ + G
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 353 --------------------LCDEAVEVFSQLEKLDGG-----SMERPNVISWSAVIGAF 387
+C ++++++L KLD +V+SW+ +I +
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 388 ASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNI 447
++AL FR+M + ++ V ++ +S CA AL G++IH + ++
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 626
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
QN L+ +Y +CG +EE +L FEQ E D I WN+++SG+ +G E AL F M
Sbjct: 627 PFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE 686
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
G + F + + A S + +G+++ ++ + + + E ++ + + G + +
Sbjct: 687 GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISD 745
Query: 568 ASDIVKNMPMEPNAYVWGTLLNSCRMH 594
A + + N W ++N+ H
Sbjct: 746 AEKQFLEVSTK-NEVSWNAIINAYSKH 771
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 99/244 (40%), Gaps = 49/244 (20%)
Query: 408 VVANSVTISGLLSVCAES-AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEG 466
+ N T+ LL C ++ +L+ GR++H ++++ ++ N + L + Y+ G L
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 467 HLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSAC--- 523
VF+++ ++ + TWN MI L F M+ P+ F VL AC
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 524 ---------------------------------SHAGLVNEGRRIFDMMVREFRIEPQME 550
S G V+ RR+FD + R++
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL----RLKDH-S 254
Query: 551 HYACMVDLLGRAGLLQEASDIVKNM---PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
+ M+ L + EA + +M + P Y + ++L++C+ ++ ++ E Q+
Sbjct: 255 SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGE----QL 310
Query: 608 FGLI 611
GL+
Sbjct: 311 HGLV 314
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 340 bits (871), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 214/689 (31%), Positives = 337/689 (48%), Gaps = 114/689 (16%)
Query: 70 LSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG-V 128
L+++ RFG L DA VF + + WN ++ G ++ A+ LY +M +G V
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMS---ERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 129 LGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMS 188
D +TFP V+R C + + G+ VH HV++ G++ ++ +VN LI MY K G +
Sbjct: 193 KPDVYTFPCVLRTCGGIPDL----ARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVK 248
Query: 189 DSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHA 248
+ LFD++ ++ ISWN M SG+ N C LELF M ++P+ +T TS
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTS------ 302
Query: 249 RCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF 308
V+S C L +G+ IH +VI GF +
Sbjct: 303 -----------------------------VISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 309 VKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLD 368
V N+L +Y G + A+ LFS +E K+IVSW +I+ Y L D+A++ + +++
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ-- 391
Query: 369 GGSMERPNVISWSAVIGAFASNGR-----------------------------------G 393
+P+ I+ +AV+ A A+ G
Sbjct: 392 --DSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCI 449
Query: 394 EEALDLFRKMQLAKVVANSVTISGLL--SVCAES-------------------------- 425
++ALD+F + V++ + I+GL + C E+
Sbjct: 450 DKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACA 509
Query: 426 --AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNS 483
AL G+EIH HV+R + + + N LL+MY++CG + F +KKD+ +WN
Sbjct: 510 RIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNI 568
Query: 484 MISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREF 543
+++GY G G + F+ M+++ +PD + F+++L CS + +V +G F M ++
Sbjct: 569 LLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDY 627
Query: 544 RIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAM 603
+ P ++HYAC+VDLLGRAG LQEA ++ MP+ P+ VWG LLN+CR+H D+ E
Sbjct: 628 GVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELS 687
Query: 604 ASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHM 663
A IF L ++ G Y+LL N+YA G+W + AKVR K GL AG SW+EVK K+H
Sbjct: 688 AQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHA 747
Query: 664 FSSGNSLQSDLKNVCEVLEELALQMENKG 692
F S + K + VLE +M G
Sbjct: 748 FLSDDKYHPQTKEINTVLEGFYEKMSEVG 776
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 230/487 (47%), Gaps = 81/487 (16%)
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+NG E A+KL M++L V D F ++R C+ ++ G V++ L
Sbjct: 71 ANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCE----WKRAQEEGSKVYSIALSSMSS 126
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
V + N + M+ + G + D++ +F K+ +N SWN++ G+A D A+ L+ RM
Sbjct: 127 LGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM 186
Query: 229 -ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
+ G++P+ T+ +L + CG GI DLA
Sbjct: 187 LWVGGVKPDVYTFPCVLRT---CG---------------GI--------------PDLAR 214
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
GK +H V++ G+E + V NALI +Y K GDVK A+ LF + ++I+SWNA+I+
Sbjct: 215 ---GKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISG 271
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAK 407
Y E G+C E +E+F FA G
Sbjct: 272 YFENGMCHEGLELF-------------------------FAMRG--------------LS 292
Query: 408 VVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
V + +T++ ++S C +GR+IH +V+ +I V N L MY+ G E
Sbjct: 293 VDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAE 352
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
+F ++E+KD+++W +MISGY N L + A+ T+ M + KPD + AVLSAC+ G
Sbjct: 353 KLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLG 412
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
++ G + + ++ R+ + ++++ + + +A DI N+P + N W ++
Sbjct: 413 DLDTGVELHKLAIKA-RLISYVIVANNLINMYSKCKCIDKALDIFHNIPRK-NVISWTSI 470
Query: 588 LNSCRMH 594
+ R++
Sbjct: 471 IAGLRLN 477
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 174/372 (46%), Gaps = 38/372 (10%)
Query: 37 LLQQCKTIHQLK---QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C T+ L ++H I + +A ++++Y++ + A ++F P
Sbjct: 404 VLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP--- 460
Query: 94 KSSSLLWNSILR-VNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ + + W SI+ + ++N +E AL ++++ K+ + + T + AC +G+
Sbjct: 461 RKNVISWTSIIAGLRLNNRCFE-AL-IFLRQMKMTLQPNAITLTAALAACARIGALMC-- 516
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ +H HVL+ G + + N L+ MY + G+M+ ++ F+ + K+ SWN++ +G+
Sbjct: 517 --GKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGY 573
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
+ +ELF RM + P+ +T+ SLL ++ + + + F M G+
Sbjct: 574 SERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNL 633
Query: 273 EAIAVVLSVCADLAADHMGKV-----IHGFVIKGGFEDYVFVKNALICVYGKHGDVKV-- 325
+ A V+ D +G+ H F+ K V AL+ H + +
Sbjct: 634 KHYACVV--------DLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGE 685
Query: 326 --AQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
AQ++F E+++K++ + L YA+ G E +V ++ K +G +++ SW V
Sbjct: 686 LSAQHIF-ELDKKSVGYYILLCNLYADCGKWREVAKV-RRMMKENGLTVDAG--CSWVEV 741
Query: 384 IG---AFASNGR 392
G AF S+ +
Sbjct: 742 KGKVHAFLSDDK 753
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 338 bits (868), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 187/542 (34%), Positives = 296/542 (54%), Gaps = 16/542 (2%)
Query: 155 GQIVHNHVLQMGFQ-GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G+ +H H+ GF+ N + N LIGMY K G+ D+ K+FD++ ++N SWN M SG+
Sbjct: 65 GKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYV 124
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ A +F M E + V+W +++ +A+ G L E + + R+ GI+
Sbjct: 125 KSGMLVRARVVFDSMP----ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEF 180
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ A +L+ C + + HG V+ GF V + ++I Y K G ++ A+ F E+
Sbjct: 181 SFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
K+I W LI+ YA+ G + A ++F + M N +SW+A+I + G G
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAAEKLFCE--------MPEKNPVSWTALIAGYVRQGSG 292
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
ALDLFRKM V T S L A A+L G+EIHG+++R ++ N +V + L
Sbjct: 293 NRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSL 352
Query: 454 LNMYMKCGCLEEGHLVFEQIEKK-DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPD 512
++MY K G LE VF + K D + WN+MIS +GLG AL ++MI+ +P+
Sbjct: 353 IDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPN 412
Query: 513 GVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIV 572
V +L+ACSH+GLV EG R F+ M + I P EHYAC++DLLGRAG +E +
Sbjct: 413 RTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKI 472
Query: 573 KNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWE 632
+ MP EP+ ++W +L CR+H N ++ + A ++ L E++ Y+LLS+IYA G+WE
Sbjct: 473 EEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWE 532
Query: 633 DAAKVRISAKTKGLKKVAGQSWIEVKRKIHMF--SSGNSLQSDLKNVCEVLEELALQMEN 690
K+R K + + K SWIE+++K+ F S G+ + + + +L LA +E
Sbjct: 533 LVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVIEE 592
Query: 691 KG 692
+
Sbjct: 593 EA 594
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 179/385 (46%), Gaps = 41/385 (10%)
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
S LS HA L + + + + ++GI + + +A +L C D + GK IH +
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 302 GFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEV 360
GF+ + N LI +Y K G A +F ++ +N+ SWN +++ Y ++G+ A V
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 361 FSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLS 420
F SM +V+SW+ ++ +A +G EAL +++ + + + N + +GLL+
Sbjct: 136 FD--------SMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLT 187
Query: 421 VCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL-- 478
C +S L + R+ HG V+ N+++ +++ Y KCG +E F+++ KD+
Sbjct: 188 ACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHI 247
Query: 479 -----------------------------ITWNSMISGYGMNGLGENALATFEEMIEAGF 509
++W ++I+GY G G AL F +MI G
Sbjct: 248 WTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGV 307
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEAS 569
KP+ F + L A + + G+ I M+R + P + ++D+ ++G L+ +
Sbjct: 308 KPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASE 366
Query: 570 DIVKNMPMEPNAYVWGTLLNSCRMH 594
+ + + + W T++++ H
Sbjct: 367 RVFRICDDKHDCVFWNTMISALAQH 391
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 192/411 (46%), Gaps = 51/411 (12%)
Query: 31 LDCFDHLLQQC---KTIHQLKQVHNQLIVTG-ANASAFLAARVLSIYARFGRLFDA---- 82
D LLQQC K++ Q K +H L +TG + L+ ++ +Y + G+ DA
Sbjct: 46 FDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVF 105
Query: 83 ---------------------------RNVFETAPFDCKSSSLLWNSILRVNVSNGLYEN 115
R VF++ P + + WN+++ +G
Sbjct: 106 DQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMP---ERDVVSWNTMVIGYAQDGNLHE 162
Query: 116 ALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVN 175
AL Y + R+ G+ + F+F ++ AC + S + + + + H VL GF NV +
Sbjct: 163 ALWFYKEFRRSGIKFNEFSFAGLLTAC--VKSRQLQLN--RQAHGQVLVAGFLSNVVLSC 218
Query: 176 ELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEP 235
+I YAK GQM + + FD++ VK+ W + SG+A D + A +LF M E
Sbjct: 219 SIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMP----EK 274
Query: 236 NFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIH 295
N V+WT+L++ + R G +DLF M G++ + L A +A+ GK IH
Sbjct: 275 NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIH 334
Query: 296 GFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK-NIVSWNALITSYAEAGLC 354
G++I+ V ++LI +Y K G ++ ++ +F ++K + V WN +I++ A+ GL
Sbjct: 335 GYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLG 394
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQL 405
+A+ + + K +PN + ++ A + +G EE L F M +
Sbjct: 395 HKALRMLDDMIKF----RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTV 441
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 154/355 (43%), Gaps = 43/355 (12%)
Query: 34 FDHLLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F LL C QL +Q H Q++V G ++ L+ ++ YA+ G++ A+ F+
Sbjct: 182 FAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT 241
Query: 91 F-----------------DCKSSSLL-----------WNSILRVNVSNGLYENALKLYVK 122
D +++ L W +++ V G AL L+ K
Sbjct: 242 VKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRK 301
Query: 123 MRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYA 182
M LGV + FTF + A + S R G+ +H ++++ + N +++ LI MY+
Sbjct: 302 MIALGVKPEQFTFSSCLCASASIASLR----HGKEIHGYMIRTNVRPNAIVISSLIDMYS 357
Query: 183 KMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWT 241
K G + S ++F K + + WN M S A + AL + M ++PN T
Sbjct: 358 KSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLV 417
Query: 242 SLLSSHARCGRLEETMDLFDMMR-KRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIK 300
+L++ + G +EE + F+ M + GI E A ++ + L K + + +
Sbjct: 418 VILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDL---LGRAGCFKELMRKIEE 474
Query: 301 GGFEDYVFVKNALICVYGKHGDVKVAQNLFSE---IEEKNIVSWNALITSYAEAG 352
FE + NA++ V HG+ ++ + E ++ ++ + L + YA+ G
Sbjct: 475 MPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHG 529
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 338 bits (867), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 214/695 (30%), Positives = 364/695 (52%), Gaps = 55/695 (7%)
Query: 37 LLQQC----KTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
LL++C K++ ++K VH +++ G L ++++Y AR+VFE FD
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFEN--FD 66
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGV-LGDGFTFPLVIRACKFMGSFRFR 151
+S +WNS++ N ++ + L+++ ++ + + D FTFP VI+A +G R
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALG----R 122
Query: 152 FSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSG 211
G+++H V++ G+ +V + + L+GMYAK +S ++FD++ ++ SWN + S
Sbjct: 123 EFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISC 182
Query: 212 FALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVG 271
F + + + ALELF RME G EPN V+ T +S+ +R LE ++ K+G E+
Sbjct: 183 FYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 272 AEAIAVVLSV-----CADLAADHMGKV-----------IHGFVIKGGFEDYVFVKNALIC 315
+ ++ + C ++A + K+ I G+V KG + V + N +I
Sbjct: 243 EYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMII 302
Query: 316 VYGKHGDVKVAQNLFSEIEEKNIVSWN-------------------ALITSYAEAGLCDE 356
+ + L + +N++ +LI Y + G +
Sbjct: 303 EGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANL 362
Query: 357 AVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTIS 416
A VFS+ +K D SW+ +I ++ S G +A++++ +M V + VT +
Sbjct: 363 AETVFSKTQK-DVAE-------SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFT 414
Query: 417 GLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKK 476
+L C++ AAL G++IH + + + L+ + LL+MY KCG +E +F I KK
Sbjct: 415 SVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Query: 477 DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIF 536
D+++W MIS YG +G AL F+EM + G KPDGV +AVLSAC HAGL++EG + F
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFF 534
Query: 537 DMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP-MEPNAYVWGTLLNSCRMHK 595
M ++ IEP +EHY+CM+D+LGRAG L EA +I++ P NA + TL ++C +H
Sbjct: 535 SQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHL 594
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
+ + +A + + +YM+L N+YA+ W+ A +VR+ K GL+K G SWI
Sbjct: 595 EHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWI 654
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
E+ K+ F + + +NV E L L+ ME+
Sbjct: 655 EMSDKVCHFFAEDRSHLRAENVYECLALLSGHMES 689
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 338 bits (867), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 218/701 (31%), Positives = 356/701 (50%), Gaps = 95/701 (13%)
Query: 74 ARFGRLFDARNVFETAPFDCKSSSLL-WNSILRVNVSNGLYENALKLYVKMRKLGVLGDG 132
+R G++ +AR +F++ C S S+ WNS++ +N + +A KL+ +M ++
Sbjct: 28 SRIGKIHEARKLFDS----CDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIIS-- 81
Query: 133 FTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFK 192
N L+ Y K G++ ++ K
Sbjct: 82 -----------------------------------------WNGLVSGYMKNGEIDEARK 100
Query: 193 LFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGR 252
+FD + +N +SW + G+ N D A LF +M E N V+WT +L + GR
Sbjct: 101 VFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP----EKNKVSWTVMLIGFLQDGR 156
Query: 253 LEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNA 312
+++ L++M+ + +++ +C + D ++ E V
Sbjct: 157 IDDACKLYEMIPDKD---NIARTSMIHGLCKEGRVDEAREIFDEMS-----ERSVITWTT 208
Query: 313 LICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE------- 365
++ YG++ V A+ +F + EK VSW +++ Y + G ++A E+F +
Sbjct: 209 MVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIAC 268
Query: 366 --KLDG--------------GSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVV 409
+ G SM+ N SW VI NG EALDLF MQ V
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 410 ANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLV 469
T+ +LSVCA A+L+ G+++H +VR + ++ V + L+ MY+KCG L + L+
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 470 FEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG-FKPDGVAFVAVLSACSHAGL 528
F++ KD+I WNS+ISGY +GLGE AL F EM +G KP+ V FVA LSACS+AG+
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 529 VNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLL 588
V EG +I++ M F ++P HYACMVD+LGRAG EA +++ +M +EP+A VWG+LL
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 589 NSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKK 648
+CR H DVAE A ++ + E +G+Y+LLSN+YA+ GRW D A++R KT+ ++K
Sbjct: 509 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 568
Query: 649 VAGQSWIEVKRKIHMFSSGN-SLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEMMGK 707
G SW EV+ K+H F+ G + + +++ ++L+EL + G PD L
Sbjct: 569 SPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYAL------ 622
Query: 708 KNVKRIQRIRADNIKSKHRIVGFRNLKLG----LRLLLSLR 744
+V +++ + S+ V + LKL +R++ +LR
Sbjct: 623 HDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLR 663
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 184/386 (47%), Gaps = 60/386 (15%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRK--- 125
++S Y + G + +AR VF+ P + + + W ++++ V NG + A L+ KM +
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMP---ERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNK 141
Query: 126 -------LGVLGDGFTFPLVIRACKF--MGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNE 176
+G L DG + ACK M + + ++H + I +E
Sbjct: 142 VSWTVMLIGFLQDG----RIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDE 197
Query: 177 -----------LIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELF 225
++ Y + ++ D+ K+FD + K +SW M G+ N + A ELF
Sbjct: 198 MSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELF 257
Query: 226 KRMELEGL---------------------------EPNFVTWTSLLSSHARCGRLEETMD 258
+ M ++ + E N +W +++ H R G E +D
Sbjct: 258 EVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALD 317
Query: 259 LFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYG 318
LF +M+K+G+ + +LSVCA LA+ H GK +H +++ F+ V+V + L+ +Y
Sbjct: 318 LFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI 377
Query: 319 KHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVI 378
K G++ ++ +F K+I+ WN++I+ YA GL +EA++VF ++ L G + +PN +
Sbjct: 378 KCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEM-PLSGST--KPNEV 434
Query: 379 SWSAVIGAFASNGRGEEALDLFRKMQ 404
++ A + A + G EE L ++ M+
Sbjct: 435 TFVATLSACSYAGMVEEGLKIYESME 460
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/522 (21%), Positives = 220/522 (42%), Gaps = 116/522 (22%)
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N I +++G++ ++ KLFD K+ SWN M +G+ N A +LF M +
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP----D 76
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI--AVVLSVCADLAADHMGK 292
N ++W L+S + + G ++E +FD+M +R + V A+ V + D+A K
Sbjct: 77 RNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV-VSWTALVKGYVHNGKVDVAESLFWK 135
Query: 293 VIH-----------GFVIKGGFEDYV-----------FVKNALICVYGKHGDVKVAQNLF 330
+ GF+ G +D + ++I K G V A+ +F
Sbjct: 136 MPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIF 195
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
E+ E+++++W ++T Y + D+A ++F M +SW++++ + N
Sbjct: 196 DEMSERSVITWTTMVTGYGQNNRVDDARKIFD--------VMPEKTEVSWTSMLMGYVQN 247
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
GR E+A +LF M + V+A + ISGL G++
Sbjct: 248 GRIEDAEELFEVMPVKPVIACNAMISGL------------GQK----------------- 278
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFK 510
G + + VF+ +++++ +W ++I + NG AL F M + G +
Sbjct: 279 ----------GEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 511 PDGVAFVAVLSACSHAGLVNEGRRIFDMMVR-EFRIE----------------------- 546
P +++LS C+ ++ G+++ +VR +F ++
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 547 ----PQME--HYACMVDLLGRAGLLQEASDIVKNMPM----EPNAYVWGTLLNSCR---- 592
P + + ++ GL +EA + MP+ +PN + L++C
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDA 634
+ + + E+M S +FG + T Y + ++ +GR+ +A
Sbjct: 449 VEEGLKIYESMES-VFG-VKPITAHYACMVDMLGRAGRFNEA 488
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 132/301 (43%), Gaps = 70/301 (23%)
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
N IT + G EA ++F S + ++ SW++++ + +N +A LF
Sbjct: 21 NVRITHLSRIGKIHEARKLFD--------SCDSKSISSWNSMVAGYFANLMPRDARKLFD 72
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+M ++NI+ NGL++ YMK G
Sbjct: 73 EMP---------------------------------------DRNIISWNGLVSGYMKNG 93
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
++E VF+ + ++++++W +++ GY NG + A + F +M E + V++ +L
Sbjct: 94 EIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLI 149
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA--CMVDLLGRAGLLQEASDIVKNMPMEP 579
G +++ ++++M+ P ++ A M+ L + G + EA +I M E
Sbjct: 150 GFLQDGRIDDACKLYEMI-------PDKDNIARTSMIHGLCKEGRVDEAREIFDEMS-ER 201
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFGLI---TETTGSYMLLSNIYAASGRWEDAAK 636
+ W T++ + D A +IF ++ TE + + ML+ Y +GR EDA +
Sbjct: 202 SVITWTTMVTGYGQNNRVDDAR----KIFDVMPEKTEVSWTSMLMG--YVQNGRIEDAEE 255
Query: 637 V 637
+
Sbjct: 256 L 256
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 105/227 (46%), Gaps = 11/227 (4%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
++H KQVH QL+ + ++A+ ++++Y + G L ++ +F+ P ++WNS
Sbjct: 346 SLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP---SKDIIMWNS 402
Query: 103 ILRVNVSNGLYENALKLYVKMRKLG-VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNH 161
I+ S+GL E ALK++ +M G + TF + AC + G +I +
Sbjct: 403 IISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGL---KIYESM 459
Query: 162 VLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMMFSGFALNFDCDG 220
G + ++ M + G+ +++ ++ D + V+ + W + + D
Sbjct: 460 ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDV 519
Query: 221 ALELFKRMELEGLEP-NFVTWTSLLSSHARCGRLEETMDLFDMMRKR 266
A F +L +EP N T+ L + +A GR + +L +M+ R
Sbjct: 520 A--EFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTR 564
>sp|Q9C8L6|PPR80_ARATH Pentatricopeptide repeat-containing protein At1g53600,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2
SV=2
Length = 717
Score = 337 bits (865), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 215/677 (31%), Positives = 361/677 (53%), Gaps = 52/677 (7%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
LQ+ + I +Q+ N+ IV+ ++A ++S YA G++ A VF+ P +S
Sbjct: 66 LQEAEAI--FRQMSNRSIVS------WIA--MISAYAENGKMSKAWQVFDEMPVRVTTS- 114
Query: 98 LLWNSILRVNVSNGL-YENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQ 156
+N+++ + N A +L+ + + + +RA RF +
Sbjct: 115 --YNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAG--------RFDEAE 164
Query: 157 IVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNF 216
++ + F+ +V N L+ Y + G+ +++ ++F + VK +S + M G+
Sbjct: 165 FLYAET-PVKFRDSV-ASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMG 222
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRG-IEVGAEAI 275
A LF RM E N +TWT+++ + + G E+ LF MR+ G ++V + +
Sbjct: 223 RIVDARSLFDRMT----ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTL 278
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
AV+ C D G IHG V + E +F+ N+L+ +Y K G + A+ +F ++
Sbjct: 279 AVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKN 338
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDG-----------------------GSM 372
K+ VSWN+LIT + EA E+F ++ D G M
Sbjct: 339 KDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMM 398
Query: 373 ERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGR 432
+ I+W+A+I AF SNG EEAL F KM +V NS T S +LS A A L G
Sbjct: 399 PEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGL 458
Query: 433 EIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNG 492
+IHG VV++++ ++ VQN L++MY KCG + + +F I + +++++N+MISGY NG
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNG 518
Query: 493 LGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHY 552
G+ AL F + +G +P+GV F+A+LSAC H G V+ G + F M + IEP +HY
Sbjct: 519 FGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHY 578
Query: 553 ACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT 612
ACMVDLLGR+GLL +AS+++ MP +P++ VWG+LL++ + H D+AE A ++ L
Sbjct: 579 ACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEP 638
Query: 613 ETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQS 672
++ Y++LS +Y+ G+ D ++ K+K +KK G SWI +K ++H F +G+ Q
Sbjct: 639 DSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQL 698
Query: 673 DLKNVCEVLEELALQME 689
+L+ + L+ + +ME
Sbjct: 699 NLEEIGFTLKMIRKEME 715
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 166/415 (40%), Gaps = 88/415 (21%)
Query: 242 SLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
S +S HAR G L+E +F M R I ++ + + A M K F
Sbjct: 55 SQISKHARNGNLQEAEAIFRQMSNRSI------VSWIAMISAYAENGKMSKAWQVF---- 104
Query: 302 GFEDYVFVK-----NALICVYGKHG-DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCD 355
D + V+ NA+I K+ D+ A LF +I EKN VS+ +IT + AG D
Sbjct: 105 ---DEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFD 161
Query: 356 EAVEVFSQLE---------------KLDGGS----------MERPNVISWSAVIGAFASN 390
EA ++++ L G M V+S S+++ +
Sbjct: 162 EAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKM 221
Query: 391 GRGEEALDLFRKM--------------------------------QLAKVVANSVTISGL 418
GR +A LF +M Q V NS T++ +
Sbjct: 222 GRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
C + G +IHG V R+ + ++ + N L++MY K G + E VF ++ KD
Sbjct: 282 FKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDS 341
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDM 538
++WNS+I+G A FE+M D V++ ++ S G +++ +F M
Sbjct: 342 VSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDMIKGFSGKGEISKCVELFGM 397
Query: 539 MVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME---PNAYVWGTLLNS 590
M + I + M+ G +EA M + PN+Y + ++L++
Sbjct: 398 MPEKDNIT-----WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 150/330 (45%), Gaps = 37/330 (11%)
Query: 307 VFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLE- 365
+F N+ I + ++G+++ A+ +F ++ ++IVSW A+I++YAE G +A +VF ++
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPV 109
Query: 366 ----------------KLDGG-------SMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
K D G + N +S++ +I F GR +EA L+ +
Sbjct: 110 RVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE 169
Query: 403 --MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKC 460
++ VA++V +SG L + A+ R G V K ++ + +++ Y K
Sbjct: 170 TPVKFRDSVASNVLLSGYLRAGKWNEAV---RVFQGMAV-----KEVVSCSSMVHGYCKM 221
Query: 461 GCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG-FKPDGVAFVAV 519
G + + +F+++ ++++ITW +MI GY G E+ F M + G K + +
Sbjct: 222 GRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 520 LSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEP 579
AC EG +I ++ R +E + ++ + + G + EA + M
Sbjct: 282 FKACRDFVRYREGSQIHGLVSR-MPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK-NK 339
Query: 580 NAYVWGTLLNSCRMHKNTDVAEAMASQIFG 609
++ W +L+ K A + ++ G
Sbjct: 340 DSVSWNSLITGLVQRKQISEAYELFEKMPG 369
>sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protein At1g05750,
chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2
SV=1
Length = 500
Score = 336 bits (861), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 178/461 (38%), Positives = 271/461 (58%), Gaps = 12/461 (2%)
Query: 238 VTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADL--AADHMGKVIH 295
V+WTS ++ R GRL E F M G+E +LS C D ++ +G ++H
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 296 GFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLC 354
G+ K G + ++V V A+I +Y K G K A+ +F +E+KN V+WN +I Y +G
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 355 DEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVT 414
D A ++F ++ + D +ISW+A+I F G EEAL FR+MQ++ V + V
Sbjct: 157 DNAAKMFDKMPERD--------LISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 415 ISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE 474
I L+ C AL+ G +H +V+ N+ V N L+++Y +CGC+E VF +E
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 475 KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRR 534
K+ +++WNS+I G+ NG +L F +M E GFKPD V F L+ACSH GLV EG R
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR 328
Query: 535 IFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
F +M ++RI P++EHY C+VDL RAG L++A +V++MPM+PN V G+LL +C H
Sbjct: 329 YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNH 388
Query: 595 KNTDV-AEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQS 653
N V AE + + L ++ +Y++LSN+YAA G+WE A+K+R K GLKK G S
Sbjct: 389 GNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFS 448
Query: 654 WIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV 694
IE+ +H+F +G++ + + EVLE ++ + +GCV
Sbjct: 449 SIEIDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQGCV 489
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 166/326 (50%), Gaps = 13/326 (3%)
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF-RFSF 154
+++ W S + + NG A K + M GV + TF ++ C G F +
Sbjct: 35 TTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC---GDFTSGSEAL 91
Query: 155 GQIVHNHVLQMGFQGN-VHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFA 213
G ++H + ++G N V + +IGMY+K G+ + +FD + KN ++WN M G+
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYM 151
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
+ D A ++F +M E + ++WT++++ + G EE + F M+ G++
Sbjct: 152 RSGQVDNAAKMFDKMP----ERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYV 207
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
AI L+ C +L A G +H +V+ F++ V V N+LI +Y + G V+ A+ +F +
Sbjct: 208 AIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNM 267
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
E++ +VSWN++I +A G E++ F ++++ +P+ ++++ + A + G
Sbjct: 268 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQE----KGFKPDAVTFTGALTACSHVGLV 323
Query: 394 EEALDLFRKMQLAKVVANSVTISGLL 419
EE L F+ M+ ++ + G L
Sbjct: 324 EEGLRYFQIMKCDYRISPRIEHYGCL 349
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Query: 50 VHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVS 109
VH ++ + ++ ++ +Y R G + AR VF K + + WNS++ +
Sbjct: 228 VHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME---KRTVVSWNSVIVGFAA 284
Query: 110 NGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQG 169
NG +L + KM++ G D TF + AC +G + QI+
Sbjct: 285 NGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK---CDYRISP 341
Query: 170 NVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
+ L+ +Y++ G++ D+ KL + +K
Sbjct: 342 RIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
Score = 37.7 bits (86), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 9/137 (6%)
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
Q + ++W S I+ NG A F +M AG +P+ + F+A+LS C G
Sbjct: 30 QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC---GDFTS 86
Query: 532 GRRIFDMMVREFRIEPQMEHYACMV-----DLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
G ++ + + ++ MV + + G ++A + M + N+ W T
Sbjct: 87 GSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYME-DKNSVTWNT 145
Query: 587 LLNSCRMHKNTDVAEAM 603
+++ D A M
Sbjct: 146 MIDGYMRSGQVDNAAKM 162
>sp|Q9SJK9|PP189_ARATH Pentatricopeptide repeat-containing protein At2g36980,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E73 PE=2
SV=1
Length = 625
Score = 335 bits (860), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 193/635 (30%), Positives = 332/635 (52%), Gaps = 31/635 (4%)
Query: 65 LAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMR 124
L +++ S+ A+ GR+ AR VF+ P + ++ WN++L GL++ A+ L+ ++R
Sbjct: 7 LTSKIASL-AKSGRIASARQVFDGMP---ELDTVAWNTMLTSYSRLGLHQEAIALFTQLR 62
Query: 125 KLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKM 184
D ++F ++ C +G+ +F G+ + + V++ GF ++ + N LI MY K
Sbjct: 63 FSDAKPDDYSFTAILSTCASLGNVKF----GRKIQSLVIRSGFCASLPVNNSLIDMYGKC 118
Query: 185 GQMSDSFKLFDKV--RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVT--W 240
+ K+F + +N ++W + + + AL++F M P V W
Sbjct: 119 SDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEM------PKRVAFAW 172
Query: 241 TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC-ADLAADHMGKVIHGFVI 299
++S HA CG+LE + LF M + + + +++ C AD + G+++H ++
Sbjct: 173 NIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVML 232
Query: 300 KGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVE 359
K G+ V KN+++ Y K G A IE VSWN++I + + G ++A+E
Sbjct: 233 KNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALE 292
Query: 360 VFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLL 419
VF + N+++W+ +I + NG GE+AL F +M + V ++ +L
Sbjct: 293 VFHLAPE--------KNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVL 344
Query: 420 SVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLI 479
C+ A L G+ IHG ++ V N L+N+Y KCG ++E F I KDL+
Sbjct: 345 HACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLV 404
Query: 480 TWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMM 539
+WN+M+ +G++GL + AL ++ MI +G KPD V F+ +L+ CSH+GLV EG IF+ M
Sbjct: 405 SWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESM 464
Query: 540 VREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM----EPNAYVWGTLLNSCRMHK 595
V+++RI +++H CM+D+ GR G L EA D+ N W TLL +C H
Sbjct: 465 VKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHW 524
Query: 596 NTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWI 655
+T++ ++ + S++LLSN+Y ++GRW++ VR +G+KK G SWI
Sbjct: 525 HTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWI 584
Query: 656 EVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMEN 690
EV ++ F G+S L+ + E L L +M N
Sbjct: 585 EVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMRN 619
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 193/433 (44%), Gaps = 83/433 (19%)
Query: 237 FVTWTSLLSSHARCGRLEETMDLFDMMRK-------------RGIEVGAEAIAV------ 277
V TS ++S A+ GR+ +FD M + + + EAIA+
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 278 ------------VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKV 325
+LS CA L G+ I VI+ GF + V N+LI +YGK D
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 326 AQNLFSEI--EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAV 383
A +F ++ + +N V+W +L+ +Y A + A++VF + M + +W+ +
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVE--------MPKRVAFAWNIM 175
Query: 384 IGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVC-AESAALNIGREIHGHVVRVS 442
I A G+ E L LF++M ++ + T S L++ C A+S+ + GR +H +++
Sbjct: 176 ISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNG 235
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIE---------------------------- 474
+ + +N +L+ Y K G ++ E IE
Sbjct: 236 WSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFH 295
Query: 475 ---KKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
+K+++TW +MI+GYG NG GE AL F EM+++G D A+ AVL ACS L+
Sbjct: 296 LAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGH 355
Query: 532 GRRIFDMMVREFRIEPQMEHYA----CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
G+ M+ I + YA +V+L + G ++EA ++ + W T+
Sbjct: 356 GK-----MIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTM 409
Query: 588 LNSCRMHKNTDVA 600
L + +H D A
Sbjct: 410 LFAFGVHGLADQA 422
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 44/271 (16%)
Query: 32 DC--FDHLLQQCKT----IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDAR-- 83
DC F L+ C + + VH ++ G +++ VLS Y + G DA
Sbjct: 203 DCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRE 262
Query: 84 -----------------------------NVFETAPFDCKSSSLLWNSILRVNVSNGLYE 114
VF AP + + + W +++ NG E
Sbjct: 263 LESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAP---EKNIVTWTTMITGYGRNGDGE 319
Query: 115 NALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIV 174
AL+ +V+M K GV D F + V+ AC + G+++H ++ GFQG ++
Sbjct: 320 QALRFFVEMMKSGVDSDHFAYGAVLHACSGLA----LLGHGKMIHGCLIHCGFQGYAYVG 375
Query: 175 NELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLE 234
N L+ +YAK G + ++ + F + K+ +SWN M F ++ D AL+L+ M G++
Sbjct: 376 NALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIK 435
Query: 235 PNFVTWTSLLSSHARCGRLEETMDLFDMMRK 265
P+ VT+ LL++ + G +EE +F+ M K
Sbjct: 436 PDNVTFIGLLTTCSHSGLVEEGCMIFESMVK 466
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 18/230 (7%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLL-WNSILRV 106
K +H LI G A++ ++++YA+ G + +A F D + L+ WN++L
Sbjct: 357 KMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFG----DIANKDLVSWNTMLFA 412
Query: 107 NVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFR-FSFGQIVHNHVLQM 165
+GL + ALKLY M G+ D TF ++ C G F +V ++ + +
Sbjct: 413 FGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPL 472
Query: 166 GFQGNVHIVNELIGMYAKMGQMSDSFKLFDK-----VRVKNYISWNMMFSGFALNFDCDG 220
V V +I M+ + G ++++ L N SW + + ++ +
Sbjct: 473 ----EVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTEL 528
Query: 221 ALELFKRMELEGLEPNFVTWTSLLSS-HARCGRLEETMDLFDMMRKRGIE 269
E+ K +++ EP+ LLS+ + GR +E D+ M +RG++
Sbjct: 529 GREVSKVLKIA--EPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMK 576
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 335 bits (859), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 212/710 (29%), Positives = 355/710 (50%), Gaps = 97/710 (13%)
Query: 43 TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNS 102
T++ LKQ+H LI + FL +L F + + +F F + L+NS
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQF---PNIFLYNS 81
Query: 103 ILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHV 162
++ V+N L+ L L++ +RK G+ GFTFPLV++AC S + G +H+ V
Sbjct: 82 LINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKL----GIDLHSLV 137
Query: 163 LQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGAL 222
++ GF +V + L+ +Y+ G+++D+ KLFD++
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP------------------------ 173
Query: 223 ELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVC 282
+ + VTWT+L S + GR E +DLF M + G++ + I VLS C
Sbjct: 174 -----------DRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSAC 222
Query: 283 ADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWN 342
H+G + G I E+ KN+ +
Sbjct: 223 V-----HVGDLDSGEWIVKYMEEMEMQKNSFV--------------------------RT 251
Query: 343 ALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRK 402
L+ YA+ G ++A VF SM ++++WS +I +ASN +E ++LF +
Sbjct: 252 TLVNLYAKCGKMEKARSVFD--------SMVEKDIVTWSTMIQGYASNSFPKEGIELFLQ 303
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
M + + +I G LS CA AL++G + R N+ + N L++MY KCG
Sbjct: 304 MLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGA 363
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
+ G VF+++++KD++ N+ ISG NG + + A F + + G PDG F+ +L
Sbjct: 364 MARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCG 423
Query: 523 CSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAY 582
C HAGL+ +G R F+ + + ++ +EHY CMVDL GRAG+L +A ++ +MPM PNA
Sbjct: 424 CVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAI 483
Query: 583 VWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAK 642
VWG LL+ CR+ K+T +AE + ++ L G+Y+ LSNIY+ GRW++AA+VR
Sbjct: 484 VWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMN 543
Query: 643 TKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILW 702
KG+KK+ G SWIE++ K+H F + + + LE+L +M G VP + + +
Sbjct: 544 KKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFF 603
Query: 703 EMMGKKNVKRIQRIRADNIKSKHRIVGFRNLKLGLRLLLSLRSTNGQLMK 752
++ ++ K R++G+ + KL + L L + + +GQ+++
Sbjct: 604 DVEEEE---------------KERVLGYHSEKLAVALGL-ISTDHGQVIR 637
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/274 (18%), Positives = 110/274 (40%), Gaps = 44/274 (16%)
Query: 403 MQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGC 462
M + V + + + + ++ + + +N ++IH ++ ++ + + N LL +
Sbjct: 1 MSIVTVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQ 60
Query: 463 LEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSA 522
+ +L+F + ++ +NS+I+G+ N L L F + + G G F VL A
Sbjct: 61 TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 120
Query: 523 CSHA-----------------------------------GLVNEGRRIFDMMVREFRIEP 547
C+ A G +N+ ++FD + +
Sbjct: 121 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP-----DR 175
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKN---MPMEPNAYVWGTLLNSCRMHKNTDVAEAMA 604
+ + + +G +EA D+ K M ++P++Y +L++C + D E +
Sbjct: 176 SVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV 235
Query: 605 SQIFGL-ITETTGSYMLLSNIYAASGRWEDAAKV 637
+ + + + + L N+YA G+ E A V
Sbjct: 236 KYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 335 bits (859), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 196/667 (29%), Positives = 346/667 (51%), Gaps = 87/667 (13%)
Query: 34 FDHLLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
FD +L C + I Q+H ++V+G + + +LS+Y++ GR DA +F
Sbjct: 242 FDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS 301
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFP-LVIRACKFMGSFR 149
++ ++ WN ++ V +GL E +L + +M GVL D TF L+ KF
Sbjct: 302 ---RADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFEN--- 355
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMF 209
+ + +H ++++ ++ + + LI Y K +S + +F + + + + M
Sbjct: 356 --LEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMI 413
Query: 210 SGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIE 269
SG+ N +LE+F+ + + PN +T S
Sbjct: 414 SGYLHNGLYIDSLEMFRWLVKVKISPNEITLVS--------------------------- 446
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNL 329
+L V L A +G+ +HGF+IK GF++ + A+I +Y K G + +A
Sbjct: 447 --------ILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAY-- 496
Query: 330 FSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFAS 389
E+F +L K D ++SW+++I A
Sbjct: 497 -----------------------------EIFERLSKRD--------IVSWNSMITRCAQ 519
Query: 390 NGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILV 449
+ A+D+FR+M ++ + + V+IS LS CA + + G+ IHG +++ S+ ++
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYS 579
Query: 450 QNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE-AG 508
++ L++MY KCG L+ VF+ +++K++++WNS+I+ G +G +++L F EM+E +G
Sbjct: 580 ESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG 639
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+PD + F+ ++S+C H G V+EG R F M ++ I+PQ EHYAC+VDL GRAG L EA
Sbjct: 640 IRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699
Query: 569 SDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAAS 628
+ VK+MP P+A VWGTLL +CR+HKN ++AE +S++ L +G Y+L+SN +A +
Sbjct: 700 YETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANA 759
Query: 629 GRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQM 688
WE KVR K + ++K+ G SWIE+ ++ H+F SG+ + ++ +L L ++
Sbjct: 760 REWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGEL 819
Query: 689 ENKGCVP 695
+G +P
Sbjct: 820 RLEGYIP 826
Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 157/603 (26%), Positives = 280/603 (46%), Gaps = 67/603 (11%)
Query: 37 LLQQCKT---IHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
LLQ C + Q KQVH LIV + ++ R+L +YA G D +F D
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYR--LDL 98
Query: 94 KSSSL-LWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ SS+ WNSI+ V NGL AL Y KM GV D TFP +++AC + +F+
Sbjct: 99 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI- 157
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
+ + V +G N + + LI Y + G++ KLFD+V K+ + WN+M +G+
Sbjct: 158 ---DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTW-------------------------------- 240
A D ++ F M ++ + PN VT+
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 241 ---TSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGF 297
SLLS +++CGR ++ LF MM + A+ + + + + M + + F
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSR------ADTVTWNCMISGYVQSGLMEESLTFF 328
Query: 298 --VIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEK----NIVSWNALITSYAEA 351
+I G ++L+ K +++ + + I +I +ALI +Y +
Sbjct: 329 YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC 388
Query: 352 GLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVAN 411
A +FSQ +D V+ ++A+I + NG ++L++FR + K+ N
Sbjct: 389 RGVSMAQNIFSQCNSVD--------VVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPN 440
Query: 412 SVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFE 471
+T+ +L V AL +GRE+HG +++ + + +++MY KCG + + +FE
Sbjct: 441 EITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE 500
Query: 472 QIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNE 531
++ K+D+++WNSMI+ + A+ F +M +G D V+ A LSAC++ +
Sbjct: 501 RLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESF 560
Query: 532 GRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSC 591
G+ I M++ + + + ++D+ + G L+ A ++ K M E N W +++ +C
Sbjct: 561 GKAIHGFMIKH-SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAAC 618
Query: 592 RMH 594
H
Sbjct: 619 GNH 621
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 64/320 (20%)
Query: 269 EVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQN 328
E ++++L C++ GK +H F+I + ++ +Y G
Sbjct: 32 ETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGK 91
Query: 329 LFS--EIEEKNIVSWNALITSYAEAGLCDEA---------------VEVFSQLEK----- 366
+F ++ +I WN++I+S+ GL ++A V F L K
Sbjct: 92 MFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL 151
Query: 367 --------------------------------LDGGSMERPN-----VISWSAVIGAFAS 389
L+ G ++ P+ V+ VI
Sbjct: 152 KNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVML 211
Query: 390 NGRGE-EALDL----FRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMN 444
NG + ALD F M++ ++ N+VT +LSVCA +++G ++HG VV ++
Sbjct: 212 NGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVD 271
Query: 445 KNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEM 504
++N LL+MY KCG ++ +F + + D +TWN MISGY +GL E +L F EM
Sbjct: 272 FEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEM 331
Query: 505 IEAGFKPDGVAFVAVLSACS 524
I +G PD + F ++L + S
Sbjct: 332 ISSGVLPDAITFSSLLPSVS 351
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 333 bits (854), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 210/741 (28%), Positives = 364/741 (49%), Gaps = 120/741 (16%)
Query: 26 YNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNV 85
+ ++LL H QQ + + + VH Q+I TGA+ A +++ YA+ G+L A ++
Sbjct: 13 HTSTLLKKLTHHSQQ-RNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 86 FETAPFDCKSSSLLWNSILRVNVSNGLYENA---LKLYVKMRKLGVLGDGFTFPLVIRAC 142
F CK + WNS++ NG ++ ++L+ +MR +L + +T + +A
Sbjct: 72 FN--AIICKDV-VSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 143 KFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNY 202
+ S + G+ H V++M G++++ L+GMY K G + D K+F + +N
Sbjct: 129 SSLQSS----TVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNT 184
Query: 203 ISWNMMFSGFALNFDCDGALE---LFKRMELEGLEPNFVTWTSLLSS------------- 246
+W+ M SG+A + A++ LF R + EG + ++V +T++LSS
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQI 243
Query: 247 ----------------------HARCGRLEETMDLFDMMRKR------------------ 266
+++C L E +FD R
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 267 -------------GIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNAL 313
GI+ I VL+ C+D+ GK +H F++K GFE ++F AL
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTAL 363
Query: 314 ICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSME 373
+ +Y K G + A+ F ++E+++ W +LI+ Y +
Sbjct: 364 VDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQ----------------------- 400
Query: 374 RPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGRE 433
N EEAL L+R+M+ A ++ N T++ +L C+ A L +G++
Sbjct: 401 ----------------NSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQ 444
Query: 434 IHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGL 493
+HGH ++ + + + L MY KCG LE+G+LVF + KD+++WN+MISG NG
Sbjct: 445 VHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQ 504
Query: 494 GENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYA 553
G+ AL FEEM+ G +PD V FV ++SACSH G V G F+MM + ++P+++HYA
Sbjct: 505 GDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYA 564
Query: 554 CMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITE 613
CMVDLL RAG L+EA + +++ ++ +W LL++C+ H ++ ++ L +
Sbjct: 565 CMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSR 624
Query: 614 TTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSD 673
+ +Y+ LS IY A GR D +V + G+ K G SWIE+K + H+F G+++
Sbjct: 625 ESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPM 684
Query: 674 LKNVCEVLEELALQMENKGCV 694
++ +++ ++ QM +G V
Sbjct: 685 IEETKDLVCLVSRQMIEEGFV 705
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 332 bits (852), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 204/658 (31%), Positives = 324/658 (49%), Gaps = 84/658 (12%)
Query: 50 VHNQLIVT-GANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
VH +++ T + FLA ++++Y++ AR V P + + W S++
Sbjct: 28 VHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTP---ARNVVSWTSLISGLA 84
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
NG + AL + +MR+ GV+ + FTFP +A + S R + G+ +H ++ G
Sbjct: 85 QNGHFSTALVEFFEMRREGVVPNDFTFPCAFKA---VASLRLPVT-GKQIHALAVKCGRI 140
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+V + MY K D+ KLFD++
Sbjct: 141 LDVFVGCSAFDMYCKTRLRDDARKLFDEIP------------------------------ 170
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
E N TW + +S+ GR E ++ F R+ + L+ C+D
Sbjct: 171 -----ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHL 225
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
++G +HG V++ GF+ V V N LI YGK ++ ++ +F+E+ KN VS
Sbjct: 226 NLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVS-------- 277
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
W +++ A+ N E+A L+ + + V
Sbjct: 278 -------------------------------WCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 409 VANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHL 468
+ IS +LS CA A L +GR IH H V+ + + I V + L++MY KCGC+E+
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 469 VFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIE--AGFKPDGVAFVAVLSACSHA 526
F+++ +K+L+T NS+I GY G + ALA FEEM G P+ + FV++LSACS A
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426
Query: 527 GLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGT 586
G V G +IFD M + IEP EHY+C+VD+LGRAG+++ A + +K MP++P VWG
Sbjct: 427 GAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGA 486
Query: 587 LLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGL 646
L N+CRMH + A +F L + +G+++LLSN +AA+GRW +A VR K G+
Sbjct: 487 LQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGI 546
Query: 647 KKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
KK AG SWI VK ++H F + + K + L +L +ME G PD + L+++
Sbjct: 547 KKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDL 604
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 162/357 (45%), Gaps = 44/357 (12%)
Query: 48 KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVN 107
KQ+H + G F+ +Y + DAR +F+ P + + WN+ + +
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP---ERNLETWNAFISNS 184
Query: 108 VSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGF 167
V++G A++ +++ R++ + TF + AC S + G +H VL+ GF
Sbjct: 185 VTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC----SDWLHLNLGMQLHGLVLRSGF 240
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
+V + N LI Y K Q+ S +F ++ KN +SW + + + N + + A L+ R
Sbjct: 241 DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR 300
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
RK +E I+ VLS CA +A
Sbjct: 301 -----------------------------------SRKDIVETSDFMISSVLSACAGMAG 325
Query: 288 DHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITS 347
+G+ IH +K E +FV +AL+ +YGK G ++ ++ F E+ EKN+V+ N+LI
Sbjct: 326 LELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGG 385
Query: 348 YAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQ 404
YA G D A+ +F ++ G PN +++ +++ A + G E + +F M+
Sbjct: 386 YAHQGQVDMALALFEEMAPRGCGPT--PNYMTFVSLLSACSRAGAVENGMKIFDSMR 440
Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 176/428 (41%), Gaps = 73/428 (17%)
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKG-GFEDYVFVKNALICVYGKHGDVKVAQN 328
+ A+A+ ++L ++ +G+V+H ++K F+ N LI +Y K + A+
Sbjct: 4 LSADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARL 63
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+ +N+VSW +LI+ A+ G A+ F ++ + G + PN ++ A A
Sbjct: 64 VLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRR--EGVV--PNDFTFPCAFKAVA 119
Query: 389 S----------------NGR------GEEALDLFRKMQLAK------------------- 407
S GR G A D++ K +L
Sbjct: 120 SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 179
Query: 408 VVANSV-------------------------TISGLLSVCAESAALNIGREIHGHVVRVS 442
++NSV T L+ C++ LN+G ++HG V+R
Sbjct: 180 FISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG 239
Query: 443 MNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFE 502
+ ++ V NGL++ Y KC + ++F ++ K+ ++W S+++ Y N E A +
Sbjct: 240 FDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 299
Query: 503 EMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRA 562
+ + +VLSAC+ + GR I V+ +E + + +VD+ G+
Sbjct: 300 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC-VERTIFVGSALVDMYGKC 358
Query: 563 GLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLS 622
G ++++ MP E N +L+ D+A A+ ++ T +YM
Sbjct: 359 GCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFV 417
Query: 623 NIYAASGR 630
++ +A R
Sbjct: 418 SLLSACSR 425
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 332 bits (852), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 191/628 (30%), Positives = 323/628 (51%), Gaps = 85/628 (13%)
Query: 38 LQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSS 97
L +C ++Q+KQ+H Q+I + +A +++S + + A VF + +
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQ---EPNV 82
Query: 98 LLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQI 157
L NS++R + N A ++ +M++ G+ D FT+P +++AC S + ++
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKAC----SGQSWLPVVKM 138
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
+HNH+ ++G ++++ N LI Y++ G + VR
Sbjct: 139 MHNHIEKLGLSSDIYVPNALIDCYSRCGGLG--------VR------------------- 171
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAV 277
A++LF++M E + V+W S+L + G L + LFD M +R +
Sbjct: 172 --DAMKLFEKMS----ERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDL--------- 216
Query: 278 VLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKN 337
N ++ Y + ++ A LF ++ E+N
Sbjct: 217 ------------------------------ISWNTMLDGYARCREMSKAFELFEKMPERN 246
Query: 338 IVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEAL 397
VSW+ ++ Y++AG + A +F ++ + NV++W+ +I +A G +EA
Sbjct: 247 TVSWSTMVMGYSKAGDMEMARVMFDKM------PLPAKNVVTWTIIIAGYAEKGLLKEAD 300
Query: 398 DLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMY 457
L +M + + ++ + +L+ C ES L++G IH + R ++ N V N LL+MY
Sbjct: 301 RLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMY 360
Query: 458 MKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFV 517
KCG L++ VF I KKDL++WN+M+ G G++G G+ A+ F M G +PD V F+
Sbjct: 361 AKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFI 420
Query: 518 AVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPM 577
AVL +C+HAGL++EG F M + + + PQ+EHY C+VDLLGR G L+EA +V+ MPM
Sbjct: 421 AVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPM 480
Query: 578 EPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKV 637
EPN +WG LL +CRMH D+A+ + + L G+Y LLSNIYAA+ WE A +
Sbjct: 481 EPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADI 540
Query: 638 RISAKTKGLKKVAGQSWIEVKRKIHMFS 665
R K+ G++K +G S +E++ IH F+
Sbjct: 541 RSKMKSMGVEKPSGASSVELEDGIHEFT 568
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 331 bits (848), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 198/657 (30%), Positives = 333/657 (50%), Gaps = 85/657 (12%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
QVH ++ G + + ++ ++++Y + G + AR +F+ S + WNS++
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV---KSVVTWNSMISGYA 271
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
+NGL AL ++ MR V +F VI+ C + RF + +H V++ GF
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFT----EQLHCSVVKYGFL 327
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+ +I L+ Y+K M D+ +LF ++
Sbjct: 328 FDQNIRTALMVAYSKCTAMLDALRLFKEI------------------------------- 356
Query: 229 ELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAAD 288
G N V+WT+++S + EE +DLF M+++G+ +V+L+ ++
Sbjct: 357 ---GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS 413
Query: 289 HMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSY 348
+H V+K +E V AL+ Y K G V
Sbjct: 414 E----VHAQVVKTNYERSSTVGTALLDAYVKLGKV------------------------- 444
Query: 349 AEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKV 408
+EA +VFS ++ D +++WSA++ +A G E A+ +F ++ +
Sbjct: 445 ------EEAAKVFSGIDDKD--------IVAWSAMLAGYAQTGETEAAIKMFGELTKGGI 490
Query: 409 VANSVTISGLLSVCAES-AALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGH 467
N T S +L+VCA + A++ G++ HG ++ ++ ++ V + LL MY K G +E
Sbjct: 491 KPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAE 550
Query: 468 LVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAG 527
VF++ +KDL++WNSMISGY +G AL F+EM + K DGV F+ V +AC+HAG
Sbjct: 551 EVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAG 610
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTL 587
LV EG + FD+MVR+ +I P EH +CMVDL RAG L++A +++NMP + +W T+
Sbjct: 611 LVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTI 670
Query: 588 LNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLK 647
L +CR+HK T++ A +I + E + +Y+LLSN+YA SG W++ AKVR + +K
Sbjct: 671 LAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVK 730
Query: 648 KVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCVPDNDIILWEM 704
K G SWIEVK K + F +G+ + LE+L+ ++++ G PD +L ++
Sbjct: 731 KEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDI 787
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 136/577 (23%), Positives = 261/577 (45%), Gaps = 104/577 (18%)
Query: 78 RLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPL 137
RL++A N+F+ +P + S + S+L +G + A +L++ + +LG+ D F
Sbjct: 42 RLYNAHNLFDKSPGRDRESYI---SLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSS 98
Query: 138 VIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKV 197
V++ + F G+ +H ++ GF +V + L+ Y K D K+FD++
Sbjct: 99 VLKVSATLCDELF----GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM 154
Query: 198 RVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETM 257
+ +N ++W + SG+A N D L LF RM+ EG +PN T+
Sbjct: 155 KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTF----------------- 197
Query: 258 DLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVY 317
A L V A+ G +H V+K G + + V N+LI +Y
Sbjct: 198 ------------------AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLY 239
Query: 318 GKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF---------------- 361
K G+V+ A+ LF + E K++V+WN++I+ YA GL EA+ +F
Sbjct: 240 LKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFA 299
Query: 362 ------SQLEKLDGGSMERPNVISW---------SAVIGAFASNGRGEEALDLFRKMQ-L 405
+ L++L +V+ + +A++ A++ +AL LF+++ +
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCV 359
Query: 406 AKVVANSVTISGLLSVCAESAALNI---------------------------GREIHGHV 438
VV+ + ISG L + A+++ E+H V
Sbjct: 360 GNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQV 419
Query: 439 VRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENAL 498
V+ + ++ V LL+ Y+K G +EE VF I+ KD++ W++M++GY G E A+
Sbjct: 420 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 499 ATFEEMIEAGFKPDGVAFVAVLSACSHAGL-VNEGRRIFDMMVREFRIEPQMEHYACMVD 557
F E+ + G KP+ F ++L+ C+ + +G++ ++ R++ + + ++
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS-RLDSSLCVSSALLT 538
Query: 558 LLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMH 594
+ + G ++ A ++ K E + W ++++ H
Sbjct: 539 MYAKKGNIESAEEVFKRQ-REKDLVSWNSMISGYAQH 574
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 198/435 (45%), Gaps = 80/435 (18%)
Query: 239 TWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFV 298
++ SLL +R GR +E LF + + G+E+ + VL V A L + G+ +H
Sbjct: 60 SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQC 119
Query: 299 IKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAV 358
IK GF D V V +L+ Y K + K + +F E++E+N+V+W LI+ YA + DE +
Sbjct: 120 IKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVL 179
Query: 359 EVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGL 418
+F +++ + G+ +PN +++A +G A G G L
Sbjct: 180 TLFMRMQ--NEGT--QPNSFTFAAALGVLAEEGVGGRGL--------------------- 214
Query: 419 LSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDL 478
++H VV+ ++K I V N L+N+Y+KCG + + ++F++ E K +
Sbjct: 215 --------------QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV 260
Query: 479 ITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACS-----------HAG 527
+TWNSMISGY NGL AL F M + +F +V+ C+ H
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCS 320
Query: 528 LVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR-----------------AGLLQ---- 566
+V G +FD +R + + A M+D L +G LQ
Sbjct: 321 VVKYG-FLFDQNIRTALMVAYSKCTA-MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGK 378
Query: 567 -EASDIVKNMP---MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLS 622
EA D+ M + PN + + +L + + ++V + + + T G+ +L
Sbjct: 379 EEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYER-SSTVGTALL-- 435
Query: 623 NIYAASGRWEDAAKV 637
+ Y G+ E+AAKV
Sbjct: 436 DAYVKLGKVEEAAKV 450
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 34 FDHLLQQCK----TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETA 89
F +L C ++ Q KQ H I + ++S +++ +L++YA+ G + A VF+
Sbjct: 497 FSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMG 146
+ + WNS++ +G AL ++ +M+K V DG TF V AC G
Sbjct: 557 R---EKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAG 610
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 330 bits (847), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 185/633 (29%), Positives = 323/633 (51%), Gaps = 52/633 (8%)
Query: 69 VLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLY-VKMRKLG 127
+L Y++ G + + + FE P + WN ++ +GL A+K Y MR
Sbjct: 78 LLLAYSKAGLISEMESTFEKLP---DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFS 134
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
T +++ + S S G+ +H V+++GF+ + + + L+ MYA +G +
Sbjct: 135 ANLTRVTLMTMLK----LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSH 247
SD+ K+F + +N + +N + G + AL+LF+ G+E + V+W +++
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFR-----GMEKDSVSWAAMIKGL 245
Query: 248 ARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYV 307
A+ G +E ++ F M+ +G+++ VL C L A + GK IH +I+ F+D++
Sbjct: 246 AQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHI 305
Query: 308 FVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKL 367
+V +ALI +Y K + A+ +F +++K
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQK------------------------------- 334
Query: 368 DGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAA 427
NV+SW+A++ + GR EEA+ +F MQ + + + T+ +S CA ++
Sbjct: 335 --------NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSS 386
Query: 428 LNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISG 487
L G + HG + + + V N L+ +Y KCG +++ +F ++ +D ++W +M+S
Sbjct: 387 LEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSA 446
Query: 488 YGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEP 547
Y G + F++M++ G KPDGV V+SACS AGLV +G+R F +M E+ I P
Sbjct: 447 YAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVP 506
Query: 548 QMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQI 607
+ HY+CM+DL R+G L+EA + MP P+A W TLL++CR N ++ + A +
Sbjct: 507 SIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESL 566
Query: 608 FGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSG 667
L Y LLS+IYA+ G+W+ A++R + K +KK GQSWI+ K K+H FS+
Sbjct: 567 IELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSAD 626
Query: 668 NSLQSDLKNVCEVLEELALQMENKGCVPDNDII 700
+ L + LEEL ++ + G PD +
Sbjct: 627 DESSPYLDQIYAKLEELNNKIIDNGYKPDTSFV 659
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 115/233 (49%), Gaps = 10/233 (4%)
Query: 34 FDHLLQQCK---TIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L C I++ KQ+H +I T ++ + ++ +Y + L A+ VF+
Sbjct: 273 FGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
+ + + W +++ G E A+K+++ M++ G+ D +T I AC + S
Sbjct: 333 ---QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLE- 388
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G H + G V + N L+ +Y K G + DS +LF+++ V++ +SW M S
Sbjct: 389 ---EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVS 445
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM 263
+A ++LF +M GL+P+ VT T ++S+ +R G +E+ F +M
Sbjct: 446 AYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLM 498
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 329 bits (843), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 180/521 (34%), Positives = 289/521 (55%), Gaps = 40/521 (7%)
Query: 168 QGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKR 227
Q + +N++I + G + + ++F +R KN I+WN + G ++ D +E +
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIG--ISKDPSRMMEAHQL 115
Query: 228 MELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAA 287
+ E EP+ ++ +LS + R E+ FD M + A
Sbjct: 116 FD-EIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKD-------------------A 155
Query: 288 DHMGKVIHGFVIKGGFED-----YVFVK------NALICVYGKHGDVKVAQNLFSEIEEK 336
+I G+ +G E Y ++ NA+I Y + GD++ A + F +
Sbjct: 156 ASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVR 215
Query: 337 NIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEA 396
+V+W A+IT Y +A + A +F + N+++W+A+I + N R E+
Sbjct: 216 GVVAWTAMITGYMKAKKVELAEAMFKDM-------TVNKNLVTWNAMISGYVENSRPEDG 268
Query: 397 LDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNM 456
L LFR M + NS +S L C+E +AL +GR+IH V + ++ ++ L++M
Sbjct: 269 LKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISM 328
Query: 457 YMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAF 516
Y KCG L + +FE ++KKD++ WN+MISGY +G + AL F EMI+ +PD + F
Sbjct: 329 YCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
Query: 517 VAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
VAVL AC+HAGLVN G F+ MVR++++EPQ +HY CMVDLLGRAG L+EA ++++MP
Sbjct: 389 VAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP 448
Query: 577 MEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAK 636
P+A V+GTLL +CR+HKN ++AE A ++ L ++ Y+ L+NIYA+ RWED A+
Sbjct: 449 FRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVAR 508
Query: 637 VRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNV 677
VR K + KV G SWIE++ K+H F S + + +L ++
Sbjct: 509 VRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSI 549
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 138/337 (40%), Gaps = 51/337 (15%)
Query: 297 FVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYA-EAGLCD 355
++ K +D +F N +I + GD+ A +F + KN ++WN+L+ + +
Sbjct: 51 YLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMM 110
Query: 356 EAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTI 415
EA ++F ++ + P+ S++ ++ + N E+A F +M + + I
Sbjct: 111 EAHQLFDEIPE--------PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMI 162
Query: 416 SGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEK 475
+G A + RE+ + M KN + N +++ Y++CG LE+ F+
Sbjct: 163 TGY----ARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKASHFFKVAPV 214
Query: 476 KDLITWNS--------------------------------MISGYGMNGLGENALATFEE 503
+ ++ W + MISGY N E+ L F
Sbjct: 215 RGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRA 274
Query: 504 MIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAG 563
M+E G +P+ + L CS + GR+I +V + + + ++ + + G
Sbjct: 275 MLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQ-IVSKSTLCNDVTALTSLISMYCKCG 333
Query: 564 LLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVA 600
L +A + + M + + W +++ H N D A
Sbjct: 334 ELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNADKA 369
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 90/171 (52%), Gaps = 5/171 (2%)
Query: 100 WNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVH 159
WN+++ V N E+ LKL+ M + G+ + + C + + + G+ +H
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQL----GRQIH 307
Query: 160 NHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCD 219
V + +V + LI MY K G++ D++KLF+ ++ K+ ++WN M SG+A + + D
Sbjct: 308 QIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNAD 367
Query: 220 GALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD-MMRKRGIE 269
AL LF+ M + P+++T+ ++L + G + M F+ M+R +E
Sbjct: 368 KALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVE 418
Score = 37.0 bits (84), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 10/121 (8%)
Query: 27 NNSLLDCFD-HLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNV 85
+++LL C + LQ + IHQ+ V + A L +S+Y + G L DA +
Sbjct: 288 SSALLGCSELSALQLGRQIHQI--VSKSTLCNDVTALTSL----ISMYCKCGELGDAWKL 341
Query: 86 FETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFM 145
FE K + WN+++ +G + AL L+ +M + D TF V+ AC
Sbjct: 342 FEVMK---KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHA 398
Query: 146 G 146
G
Sbjct: 399 G 399
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 328 bits (841), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 212/669 (31%), Positives = 350/669 (52%), Gaps = 53/669 (7%)
Query: 54 LIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNVSNGLY 113
L TG N S F +R+ +R G++ +AR F++ F S WNSI+ SNGL
Sbjct: 13 LTSTGVNCS-FEISRL----SRIGKINEARKFFDSLQFKAIGS---WNSIVSGYFSNGLP 64
Query: 114 ENALKLYVKMRKLGVLG-DGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVH 172
+ A +L+ +M + V+ +G G + R + +V ++ + NV
Sbjct: 65 KEARQLFDEMSERNVVSWNGLV----------SGYIKNRMI---VEARNVFELMPERNVV 111
Query: 173 IVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEG 232
++ Y + G + ++ LF ++ +N +SW +MF G + D A +L+ M ++
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK- 170
Query: 233 LEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGK 292
+ V T+++ R GR++E +FD MR+R + I A + +
Sbjct: 171 ---DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFE 227
Query: 293 VIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAG 352
V+ E +++ Y G ++ A+ F + K +++ NA+I + E G
Sbjct: 228 VMP--------EKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVG 279
Query: 353 LCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANS 412
+A VF +E D + W +I A+ G EALDLF +MQ V +
Sbjct: 280 EISKARRVFDLMEDRDNAT--------WRGMIKAYERKGFELEALDLFAQMQKQGVRPSF 331
Query: 413 VTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQ 472
++ +LSVCA A+L GR++H H+VR + ++ V + L+ MY+KCG L + LVF++
Sbjct: 332 PSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR 391
Query: 473 IEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
KD+I WNS+ISGY +GLGE AL F EM +G P+ V +A+L+ACS+AG + EG
Sbjct: 392 FSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEG 451
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
IF+ M +F + P +EHY+C VD+LGRAG + +A +++++M ++P+A VWG LL +C+
Sbjct: 452 LEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACK 511
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
H D+AE A ++F + G+Y+LLS+I A+ +W D A VR + +T + K G
Sbjct: 512 THSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGC 571
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCE------VLEELALQMENKGCVPDNDIILWEMMG 706
SWIEV +K+HMF+ G +KN E +LE+ + G PD +L ++
Sbjct: 572 SWIEVGKKVHMFTRGG-----IKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDE 626
Query: 707 KKNVKRIQR 715
++ V + R
Sbjct: 627 EEKVDSLSR 635
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 37 LLQQCKTIHQL---KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
+L C T+ L +QVH L+ + ++A+ ++++Y + G L A+ VF+ F
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR--FSS 394
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFS 153
K ++WNSI+ S+GL E ALK++ +M G + + T ++ AC + G
Sbjct: 395 K-DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGL- 452
Query: 154 FGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK 200
+I + + V + + M + GQ+ + +L + + +K
Sbjct: 453 --EIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIK 497
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 327 bits (839), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 223/765 (29%), Positives = 372/765 (48%), Gaps = 150/765 (19%)
Query: 69 VLSIYARFGRLFDARNVF-ETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLG 127
V++ Y R G+L DAR +F E + D + WN ++ + G A++ + MRK
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDV----VAWNVMISGHGKRGCETVAIEYFFNMRKSS 322
Query: 128 VLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQM 187
V T V+ A + + G +VH +++G N+++ + L+ MY+K +M
Sbjct: 323 VKSTRSTLGSVLSAIGIVANL----DLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKM 378
Query: 188 SDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSS- 246
+ K+F+ + KN + WN M G+A N + +ELF M+ G + T+TSLLS+
Sbjct: 379 EAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTC 438
Query: 247 ----------------------------------HARCGRLE------------------ 254
+A+CG LE
Sbjct: 439 AASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWN 498
Query: 255 -------------ETMDLFDMMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKG 301
E DLF M GI +A L C + + GK +H +K
Sbjct: 499 TIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKC 558
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
G + + ++LI +Y K G +K A+ +FS + E ++VS NALI Y++ L +EAV +F
Sbjct: 559 GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLF 617
Query: 362 SQLEKLDGGSMERPNVISWSAVIGA---------------------FASNG--------- 391
++ L G P+ I+++ ++ A F+S G
Sbjct: 618 QEM--LTRGV--NPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLG 673
Query: 392 -----RG-EEALDLFRKMQLAK--------------------------------VVANSV 413
RG EA LF ++ K V+ +
Sbjct: 674 MYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQA 733
Query: 414 TISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQI 473
T +L VC+ ++L GR IH + ++ + + L N L++MY KCG ++ VF+++
Sbjct: 734 TFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEM 793
Query: 474 EKK-DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEG 532
++ ++++WNS+I+GY NG E+AL F+ M ++ PD + F+ VL+ACSHAG V++G
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDG 853
Query: 533 RRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNAYVWGTLLNSCR 592
R+IF+MM+ ++ IE +++H ACMVDLLGR G LQEA D ++ ++P+A +W +LL +CR
Sbjct: 854 RKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACR 913
Query: 593 MHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISAKTKGLKKVAGQ 652
+H + E A ++ L + + +Y+LLSNIYA+ G WE A +R + +G+KKV G
Sbjct: 914 IHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGY 973
Query: 653 SWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQMENKGCV-PD 696
SWI+V+++ H+F++G+ S++ + LE+L M++ V PD
Sbjct: 974 SWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVVNPD 1018
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/575 (24%), Positives = 269/575 (46%), Gaps = 80/575 (13%)
Query: 34 FDHLLQQCKTIHQL-KQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFD 92
FD + Q+ ++ K VH++ ++ G ++ L ++ +YA+ ++ A F+ D
Sbjct: 65 FDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKD 124
Query: 93 CKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ WNS+L + S G L+ +V + + + + FTF +V+ C +
Sbjct: 125 VTA----WNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTC----ARETNV 176
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
FG+ +H +++MG + N + L+ MYAK ++SD+ ++F+ + N + W +FSG+
Sbjct: 177 EFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGY 236
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMR-------- 264
+ A+ +F+RM EG P+ + + ++++++ R G+L++ LF M
Sbjct: 237 VKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWN 296
Query: 265 -------KRGIEVGA----------------EAIAVVLSVCADLAADHMGKVIHGFVIKG 301
KRG E A + VLS +A +G V+H IK
Sbjct: 297 VMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKL 356
Query: 302 GFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVF 361
G ++V ++L+ +Y K ++ A +F +EEKN V WNA+I YA
Sbjct: 357 GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAH----------- 405
Query: 362 SQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSV 421
NG + ++LF M+ + + T + LLS
Sbjct: 406 ----------------------------NGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 422 CAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITW 481
CA S L +G + H +++ + KN+ V N L++MY KCG LE+ +FE++ +D +TW
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTW 497
Query: 482 NSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVR 541
N++I Y + A F+ M G DG + L AC+H + +G+++ + V+
Sbjct: 498 NTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK 557
Query: 542 EFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMP 576
++ + + ++D+ + G++++A + ++P
Sbjct: 558 -CGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 166/342 (48%), Gaps = 36/342 (10%)
Query: 34 FDHLLQQCKTIHQLK---QVHNQLIVTG-ANASAFLAARVLSIYARFGRLFDARNVFETA 89
F +++ C L Q H Q+ G ++ +L +L +Y + +A +F +
Sbjct: 632 FATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALF--S 689
Query: 90 PFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFR 149
S +LW ++ + NG YE ALK Y +MR GVL D TF V+R C + S R
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLR 749
Query: 150 FRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVK-NYISWNMM 208
G+ +H+ + + + N LI MYAK G M S ++FD++R + N +SWN +
Sbjct: 750 E----GRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSL 805
Query: 209 FSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMM-RKRG 267
+G+A N + AL++F M + P+ +T+ +L++ + G++ + +F+MM + G
Sbjct: 806 INGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYG 865
Query: 268 IEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKN---------ALICVYG 318
IE + +A ++ D +G+ G++ + +D++ +N +L+
Sbjct: 866 IEARVDHVACMV--------DLLGR--WGYLQEA--DDFIEAQNLKPDARLWSSLLGACR 913
Query: 319 KHGDV---KVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEA 357
HGD +++ E+E +N ++ L YA G ++A
Sbjct: 914 IHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKA 955
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 146/308 (47%), Gaps = 34/308 (11%)
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
NA++ YA+ A + F LEK +V +W++++ ++S G+ + L F
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFLEK---------DVTAWNSMLSMYSSIGKPGKVLRSFV 149
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
+ ++ N T S +LS CA + GR+IH ++++ + +N L++MY KC
Sbjct: 150 SLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCD 209
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
+ + VFE I + + W + SGY GL E A+ FE M + G +PD +AFV V++
Sbjct: 210 RISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVIN 269
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM---PME 578
G + + R +F M P + + M+ G+ G A + NM ++
Sbjct: 270 TYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVK 324
Query: 579 PNAYVWGTLLNSCRMHKNTDV-----AEA----MASQIFGLITETTGSYMLLSNIYAASG 629
G++L++ + N D+ AEA +AS I+ GS ++ ++Y+
Sbjct: 325 STRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIY------VGSSLV--SMYSKCE 376
Query: 630 RWEDAAKV 637
+ E AAKV
Sbjct: 377 KMEAAAKV 384
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 327 bits (839), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 209/694 (30%), Positives = 339/694 (48%), Gaps = 118/694 (17%)
Query: 49 QVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSILRVNV 108
+VH ++I G + A + +L +Y + G L DA VF+ P + W++++ +
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPV---RDLVAWSTLVSSCL 178
Query: 109 SNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQMGFQ 168
NG AL+++ M GV D T V+ C +G R S VH + + F
Sbjct: 179 ENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARS----VHGQITRKMFD 234
Query: 169 GNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALELFKRM 228
+ + N L+ MY+K G + S ++F+K+ KN +SW M S + + AL F M
Sbjct: 235 LDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEM 294
Query: 229 ELEGLEPNFVTWTSLLSS------------------------------------HARCGR 252
G+EPN VT S+LSS +A CG+
Sbjct: 295 IKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGK 354
Query: 253 LE-------------------------------ETMDLFDMMRKRGIEVGAEAIAVVLSV 281
L + + LF M + I+ A +A +S
Sbjct: 355 LSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISA 414
Query: 282 CADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEEKNIVSW 341
C + +GK IHG VI+ D FV+N+LI +Y K G V A +F++I+ +++V+W
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTW 473
Query: 342 NALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEEALDLFR 401
N+++ +++ G EA+ LF
Sbjct: 474 NSMLCGFSQNGNSVEAIS---------------------------------------LFD 494
Query: 402 KMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLNMYMKCG 461
M + + N VT ++ C+ +L G+ +H H + +S K++ L++MY KCG
Sbjct: 495 YMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVH-HKLIISGLKDLFTDTALIDMYAKCG 553
Query: 462 CLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAVLS 521
L VF + + +++W+SMI+ YGM+G +A++TF +M+E+G KP+ V F+ VLS
Sbjct: 554 DLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLS 613
Query: 522 ACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPMEPNA 581
AC H+G V EG+ F++M + F + P EH+AC +DLL R+G L+EA +K MP +A
Sbjct: 614 ACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADA 672
Query: 582 YVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAAKVRISA 641
VWG+L+N CR+H+ D+ +A+ + + ++T+ TG Y LLSNIYA G WE+ ++R +
Sbjct: 673 SVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAM 732
Query: 642 KTKGLKKVAGQSWIEVKRKIHMFSSG--NSLQSD 673
K+ LKKV G S IE+ +K+ F +G N +Q+D
Sbjct: 733 KSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTD 766
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/607 (24%), Positives = 269/607 (44%), Gaps = 116/607 (19%)
Query: 37 LLQQCKTIHQLKQVHNQLIVTGA-NASAFLAARVLSIYARFGRLFDARNVFETAPFDCKS 95
L + C ++ + Q+H L+VTG +++ YA G +R VFE P+
Sbjct: 7 LFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPY---P 63
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
S ++ +++ NV L + A+ LY ++ F FP V+RAC GS R S G
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACA--GS-REHLSVG 120
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALN 215
VH +++ G + I L+ MY + G +SD+ K+FD + V++ ++W+ + S N
Sbjct: 121 GKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN 180
Query: 216 FDCDGALELFKRMELEGLEPNFVTW----------------------------------- 240
+ AL +FK M +G+EP+ VT
Sbjct: 181 GEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLC 240
Query: 241 TSLLSSHARCGRL-------------------------------EETMDLFDMMRKRGIE 269
SLL+ +++CG L E+ + F M K GIE
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 300
Query: 270 VGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFE-DYVFVKNALICVYGKHGDVKVAQN 328
+ VLS C + GK +HGF ++ + +Y + AL+ +Y + G + +
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 360
Query: 329 LFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFA 388
+ + ++NIV+WN+LI+ YA G+ +A+ +F Q
Sbjct: 361 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQ------------------------- 395
Query: 389 SNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNIL 448
M ++ ++ T++ +S C + + +G++IHGHV+R ++
Sbjct: 396 --------------MVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDE-F 440
Query: 449 VQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAG 508
VQN L++MY K G ++ VF QI+ + ++TWNSM+ G+ NG A++ F+ M +
Sbjct: 441 VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSY 500
Query: 509 FKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEA 568
+ + V F+AV+ ACS G + +G+ + ++ + + ++D+ + G L A
Sbjct: 501 LEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTD--TALIDMYAKCGDLNAA 558
Query: 569 SDIVKNM 575
+ + M
Sbjct: 559 ETVFRAM 565
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 122/252 (48%), Gaps = 19/252 (7%)
Query: 344 LITSYAEAGLCDEAVEVFSQLEKLDG---GSMERPNVISWSAVIGAFASNGRGEEALDLF 400
LI SYA G D + VF D G + + NV W ++ A A+DL+
Sbjct: 40 LIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNV--WCHLLDA---------AIDLY 88
Query: 401 RKMQLAKVVANSVTISGLLSVCAESAA-LNIGREIHGHVVRVSMNKNILVQNGLLNMYMK 459
++ + +L CA S L++G ++HG +++ ++ + +++ LL MY +
Sbjct: 89 HRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQ 148
Query: 460 CGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVAFVAV 519
G L + VF+ + +DL+ W++++S NG AL F+ M++ G +PD V ++V
Sbjct: 149 TGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISV 208
Query: 520 LSACSHAGLVNEGRRIFDMMVRE-FRIEPQMEHYACMVDLLGRAGLLQEASDIVKNMPME 578
+ C+ G + R + + R+ F ++ + + ++ + + G L + I + + +
Sbjct: 209 VEGCAELGCLRIARSVHGQITRKMFDLDETLCN--SLLTMYSKCGDLLSSERIFEKIA-K 265
Query: 579 PNAYVWGTLLNS 590
NA W +++S
Sbjct: 266 KNAVSWTAMISS 277
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 326 bits (836), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 203/716 (28%), Positives = 346/716 (48%), Gaps = 117/716 (16%)
Query: 45 HQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDCKSSSLLWNSIL 104
+L H I G+ + +++ R+L Y +FG L A +F+ P K S+ WN+++
Sbjct: 17 QKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMP---KRDSVSWNTMI 73
Query: 105 RVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFGQIVHNHVLQ 164
S G E+A L+ M++ G DG++F R K + S + RF G+ VH V++
Sbjct: 74 SGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFS---RLLKGIASVK-RFDLGEQVHGLVIK 129
Query: 165 MGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFDCDGALEL 224
G++ NV++ + L+ MYAK ++ D+F+ F ++ N +SWN + +GF D A L
Sbjct: 130 GGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWL 189
Query: 225 FKRMELE------------------------------------GLEPNFVTWTSLLSSHA 248
ME++ GL+ +++SS+A
Sbjct: 190 LGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYA 249
Query: 249 RCGRL--------------------------------EETMDLFDMMRKRGIEVGAEAIA 276
CG + E +LF M++ +E
Sbjct: 250 DCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYT 309
Query: 277 VVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKH--GDVKVAQNLFSEIE 334
+LS C+ GK +HG VIK G E NALI +Y + G ++ A +LF ++
Sbjct: 310 GLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLK 369
Query: 335 EKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGE 394
K+++SWN++IT +A+ GL ++AV+ FS L
Sbjct: 370 SKDLISWNSIITGFAQKGLSEDAVKFFSYLRS---------------------------- 401
Query: 395 EALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLL 454
+++ + S LL C++ A L +G++IH + N V + L+
Sbjct: 402 -----------SEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLI 450
Query: 455 NMYMKCGCLEEGHLVFEQIEKK-DLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
MY KCG +E F+QI K + WN+MI GY +GLG+ +L F +M K D
Sbjct: 451 VMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDH 510
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
V F A+L+ACSH GL+ EG + ++M ++I+P+MEHYA VDLLGRAGL+ +A ++++
Sbjct: 511 VTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIE 570
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
+MP+ P+ V T L CR ++A +A+ + + E +Y+ LS++Y+ +WE+
Sbjct: 571 SMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEE 630
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEELALQME 689
A V+ K +G+KKV G SWIE++ ++ F++ + +++ ++++L +M+
Sbjct: 631 KASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 325 bits (834), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 183/591 (30%), Positives = 301/591 (50%), Gaps = 80/591 (13%)
Query: 96 SSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRFRFSFG 155
+S WN LR L+ ++ LY M + G D F+FP ++++C S S G
Sbjct: 17 ASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSC---ASLSLPVS-G 72
Query: 156 QIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYIS--WNMMFSGFA 213
Q +H HV + G + ++ LI MY K G ++D+ K+F++ + +S +N + SG+
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYT 132
Query: 214 LNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE 273
N A +F+R M++ G+ V +
Sbjct: 133 ANSKVTDAAYMFRR-----------------------------------MKETGVSVDSV 157
Query: 274 AIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEI 333
+ ++ +C +G+ +HG +KGG + V V N+ I +Y K G V+ + LF E+
Sbjct: 158 TMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEM 217
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRG 393
K + I+W+AVI ++ NG
Sbjct: 218 PVKGL---------------------------------------ITWNAVISGYSQNGLA 238
Query: 394 EEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGL 453
+ L+L+ +M+ + V + T+ +LS CA A IG E+ V N+ V N
Sbjct: 239 YDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNAS 298
Query: 454 LNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDG 513
++MY +CG L + VF+ + K L++W +MI YGM+G+GE L F++MI+ G +PDG
Sbjct: 299 ISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDG 358
Query: 514 VAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVK 573
FV VLSACSH+GL ++G +F M RE+++EP EHY+C+VDLLGRAG L EA + ++
Sbjct: 359 AVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIE 418
Query: 574 NMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWED 633
+MP+EP+ VWG LL +C++HKN D+AE +++ G Y+L+SNIY+ S E
Sbjct: 419 SMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEG 478
Query: 634 AAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLEEL 684
++R+ + + +K G S++E K ++H+F +G+ + V +L+EL
Sbjct: 479 IWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/520 (23%), Positives = 223/520 (42%), Gaps = 86/520 (16%)
Query: 34 FDHLLQQCKTIH---QLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAP 90
F +L+ C ++ +Q+H + G F+ ++S+Y + G + DAR VFE P
Sbjct: 56 FPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENP 115
Query: 91 FDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRACKFMGSFRF 150
S+ +N+++ +N +A ++ +M++ GV D T ++ C +
Sbjct: 116 -QSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLC----TVPE 170
Query: 151 RFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFS 210
G+ +H ++ G V ++N I MY K G + +LFD++ VK I+WN + S
Sbjct: 171 YLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVIS 230
Query: 211 GFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEV 270
G++ N LEL+++M+ G+ P+ T S+LSS
Sbjct: 231 GYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSS------------------------ 266
Query: 271 GAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLF 330
CA L A +G + V GF VFV NA I +Y + G++ A+ +F
Sbjct: 267 -----------CAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 331 SEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASN 390
+ K++VSW A+I Y G+ + + +F + K RP+ + V+ A + +
Sbjct: 316 DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG----IRPDGAVFVMVLSACSHS 371
Query: 391 GRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQ 450
G ++ L+LFR M+ L G E +
Sbjct: 372 GLTDKGLELFRAMK-------------------REYKLEPGPEHY--------------- 397
Query: 451 NGLLNMYMKCGCLEEGHLVFEQIE-KKDLITWNSMISGYGMNGLGENALATFEEMIEAGF 509
+ L+++ + G L+E E + + D W +++ ++ + A F ++IE F
Sbjct: 398 SCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--F 455
Query: 510 KPDGVAFVAVLSACSHAGLVNEGRRIFDMMVRE--FRIEP 547
+P+ + + ++S EG +M+RE FR +P
Sbjct: 456 EPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 495
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 325 bits (832), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/467 (35%), Positives = 272/467 (58%), Gaps = 13/467 (2%)
Query: 217 DCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAE-AI 275
D D A LF ++ PN + S++ ++ + + ++ + ++ E+
Sbjct: 57 DMDYATRLFNQVS----NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTF 112
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSEIEE 335
+ CA L + ++GK +HG + K G +V +NALI +Y K D+ A +F E+ E
Sbjct: 113 PFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYE 172
Query: 336 KNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGRGEE 395
++++SWN+L++ YA G +A +F + LD ++SW+A+I + G E
Sbjct: 173 RDVISWNSLLSGYARLGQMKKAKGLFHLM--LD------KTIVSWTAMISGYTGIGCYVE 224
Query: 396 ALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRVSMNKNILVQNGLLN 455
A+D FR+MQLA + + +++ +L CA+ +L +G+ IH + R K V N L+
Sbjct: 225 AMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIE 284
Query: 456 MYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEAGFKPDGVA 515
MY KCG + + +F Q+E KD+I+W++MISGY +G A+ TF EM A KP+G+
Sbjct: 285 MYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGIT 344
Query: 516 FVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQEASDIVKNM 575
F+ +LSACSH G+ EG R FDMM ++++IEP++EHY C++D+L RAG L+ A +I K M
Sbjct: 345 FLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTM 404
Query: 576 PMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLITETTGSYMLLSNIYAASGRWEDAA 635
PM+P++ +WG+LL+SCR N DVA + L E G+Y+LL+NIYA G+WED +
Sbjct: 405 PMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVS 464
Query: 636 KVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEVLE 682
++R + + +KK G S IEV + F SG++ + + VL+
Sbjct: 465 RLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQ 511
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 208/403 (51%), Gaps = 17/403 (4%)
Query: 34 FDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAARVLSIYARFGRLFDARNVFETAPFDC 93
F LQ+ K+ ++ K+++ +I+ G + S+F+ +++ + + A +F
Sbjct: 13 FIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQV---S 69
Query: 94 KSSSLLWNSILRVNVSNGLYENALKLYVKM-RKLGVLGDGFTFPLVIRACKFMGSFRFRF 152
+ L+NSI+R N LY + +++Y ++ RK L D FTFP + ++C +GS
Sbjct: 70 NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYL-- 127
Query: 153 SFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGF 212
G+ VH H+ + G + +V N LI MY K + D+ K+FD++ ++ ISWN + SG+
Sbjct: 128 --GKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGY 185
Query: 213 ALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGA 272
A A LF M L+ V+WT+++S + G E MD F M+ GIE
Sbjct: 186 ARLGQMKKAKGLFHLM----LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDE 241
Query: 273 EAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHGDVKVAQNLFSE 332
++ VL CA L + +GK IH + + GF V NALI +Y K G + A LF +
Sbjct: 242 ISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQ 301
Query: 333 IEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGAFASNGR 392
+E K+++SW+ +I+ YA G A+E F+++++ + +PN I++ ++ A + G
Sbjct: 302 MEGKDVISWSTMISGYAYHGNAHGAIETFNEMQR----AKVKPNGITFLGLLSACSHVGM 357
Query: 393 GEEALDLFRKMQLAKVVANSVTISG-LLSVCAESAALNIGREI 434
+E L F M+ + + G L+ V A + L EI
Sbjct: 358 WQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEI 400
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 194/694 (27%), Positives = 346/694 (49%), Gaps = 89/694 (12%)
Query: 24 ITYNNSLLDCFDHLLQQCKTIHQLKQVHNQLIVTGANASAFLAAR--VLSIYARFGRLFD 81
+T+ L C D + Q + QVH + G + + FL +L Y RL
Sbjct: 148 VTFTTLLPGCNDAVPQNA-----VGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 82 ARNVFETAPFDCKSSSLLWNSILRVNVSNGLYENALKLYVKMRKLGVLGDGFTFPLVIRA 141
A +FE P + S+ +N+++ +GLY ++ L++KMR+ G FTF V++A
Sbjct: 203 ACVLFEEIP---EKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 142 CKFMGSFRFRFSFGQIVHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKN 201
+ F + GQ +H + GF + + N+++ Y+K ++ ++ LFD
Sbjct: 260 VVGLHDF----ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFD------ 309
Query: 202 YISWNMMFSGFALNFDCDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFD 261
E E +FV++ ++SS+++ + E ++ F
Sbjct: 310 -----------------------------EMPELDFVSYNVVISSYSQADQYEASLHFFR 340
Query: 262 MMRKRGIEVGAEAIAVVLSVCADLAADHMGKVIHGFVIKGGFEDYVFVKNALICVYGKHG 321
M+ G + A +LS+ A+L++ MG+ +H + + + V N+L+ +Y K
Sbjct: 341 EMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAK-- 398
Query: 322 DVKVAQNLFSEIEEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWS 381
E+F + E L S+ + +SW+
Sbjct: 399 ------------------------------------CEMFEEAE-LIFKSLPQRTTVSWT 421
Query: 382 AVIGAFASNGRGEEALDLFRKMQLAKVVANSVTISGLLSVCAESAALNIGREIHGHVVRV 441
A+I + G L LF KM+ + + A+ T + +L A A+L +G+++H ++R
Sbjct: 422 ALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRS 481
Query: 442 SMNKNILVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATF 501
+N+ +GL++MY KCG +++ VFE++ ++ ++WN++IS + NG GE A+ F
Sbjct: 482 GNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAF 541
Query: 502 EEMIEAGFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGR 561
+MIE+G +PD V+ + VL+ACSH G V +G F M + I P+ +HYACM+DLLGR
Sbjct: 542 AKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGR 601
Query: 562 AGLLQEASDIVKNMPMEPNAYVWGTLLNSCRMHKNTDVAEAMASQIFGLIT-ETTGSYML 620
G EA ++ MP EP+ +W ++LN+CR+HKN +AE A ++F + +Y+
Sbjct: 602 NGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVS 661
Query: 621 LSNIYAASGRWEDAAKVRISAKTKGLKKVAGQSWIEVKRKIHMFSSGNSLQSDLKNVCEV 680
+SNIYAA+G WE V+ + + +G+KKV SW+EV KIH+FSS + + +
Sbjct: 662 MSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRK 721
Query: 681 LEELALQMENKGCVPDNDIILWEMMGKKNVKRIQ 714
+ EL ++E +G PD ++ ++ + ++ ++
Sbjct: 722 INELTAEIEREGYKPDTSSVVQDVDEQMKIESLK 755
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 221/503 (43%), Gaps = 80/503 (15%)
Query: 158 VHNHVLQMGFQGNVHIVNELIGMYAKMGQMSDSFKLFDKVRVKNYISWNMMFSGFALNFD 217
V +++ GF + N ++ + GQ+S + K++D++ KN +S N M SG D
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGD 94
Query: 218 CDGALELFKRMELEGLEPNFVTWTSLLSSHARCGRLEETMDLFDMMRKRGIEVGAEAI-- 275
A +LF M + VTWT L+ +AR +E LF M + + +
Sbjct: 95 VSSARDLFDAMP----DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 276 AVVLSVCADLAADHMGKVIHGFVIKGGFEDYVF--VKNALICVYGKHGDVKVAQNLFSEI 333
+L C D + +H F +K GF+ F V N L+ Y + + +A LF EI
Sbjct: 151 TTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEI 210
Query: 334 EEKNIVSWNALITSYAEAGLCDEAVEVFSQLEKLDGGSMERPNVISWSAVIGA------- 386
EK+ V++N LIT Y + GL E++ +F ++ + S +P+ ++S V+ A
Sbjct: 211 PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQ----SGHQPSDFTFSGVLKAVVGLHDF 266
Query: 387 ----------------------------FASNGRGEEALDLFRKMQLAKVVANSVTISG- 417
++ + R E LF +M V+ +V IS
Sbjct: 267 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSY 326
Query: 418 ------------------------------LLSVCAESAALNIGREIHGHVVRVSMNKNI 447
+LS+ A ++L +GR++H + + + +
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL 386
Query: 448 LVQNGLLNMYMKCGCLEEGHLVFEQIEKKDLITWNSMISGYGMNGLGENALATFEEMIEA 507
V N L++MY KC EE L+F+ + ++ ++W ++ISGY GL L F +M +
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS 446
Query: 508 GFKPDGVAFVAVLSACSHAGLVNEGRRIFDMMVREFRIEPQMEHYACMVDLLGRAGLLQE 567
+ D F VL A + + G+++ ++R +E + + +VD+ + G +++
Sbjct: 447 NLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKD 505
Query: 568 ASDIVKNMPMEPNAYVWGTLLNS 590
A + + MP + NA W L+++
Sbjct: 506 AVQVFEEMP-DRNAVSWNALISA 527
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 306,605,168
Number of Sequences: 539616
Number of extensions: 12421860
Number of successful extensions: 51393
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 40147
Number of HSP's gapped (non-prelim): 2647
length of query: 881
length of database: 191,569,459
effective HSP length: 126
effective length of query: 755
effective length of database: 123,577,843
effective search space: 93301271465
effective search space used: 93301271465
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 66 (30.0 bits)