BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002793
(880 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255545438|ref|XP_002513779.1| RNA binding protein, putative [Ricinus communis]
gi|223546865|gb|EEF48362.1| RNA binding protein, putative [Ricinus communis]
Length = 1099
Score = 1174 bits (3038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/884 (66%), Positives = 704/884 (79%), Gaps = 8/884 (0%)
Query: 3 GFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEY--SNCTLLSEKGIHHDDDS-SS 59
G SN+ ++ ED N E + M S CKGK KV+V +++ S L +KGIH +D S ++
Sbjct: 216 GPSNSIALAEDCNSAVELSEMASGSCKGKIKVEVDHDFAESGSFSLPQKGIHSEDSSCAT 275
Query: 60 EAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGR 119
EA +QE+ GYN G HPS S+S+ SS Q++G NA+ RL MISS+PTKRPTGR
Sbjct: 276 EAVHQELNGSTGYNIGIGDHPSASESSNFGSSMGQHEGANAVGRLCTMISSHPTKRPTGR 335
Query: 120 VVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPK 179
VV+IIERSPRRD I+GFLNV QWF + +KD+KKN++S S+ DREYIQL PT PK+PK
Sbjct: 336 VVAIIERSPRRDAIIGFLNVKQWFYCREACKKDSKKNKNSSSISDREYIQLMPTDPKFPK 395
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
M+VL LPDSIKKRLE GDAT+EMELVAA+ID W++ESP P AHV +FGRG E+EPQ+
Sbjct: 396 MMVLASSLPDSIKKRLEGGDATVEMELVAAQIDNWDDESPSPHAHVSRIFGRGSELEPQL 455
Query: 240 NAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDAL 299
+AILYEN IC S FSPESLSC+PC WEVP EE+ RKDLRN CIFTIDPSTATDLDDAL
Sbjct: 456 SAILYENTICYSDFSPESLSCIPCDSWEVPAEEIRRRKDLRNLCIFTIDPSTATDLDDAL 515
Query: 300 SIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGS 359
S+ERL +GI RVGVHIADVSYFVLP +ALD EAQ RSTSVY+L+ K+PMLP LLSE +GS
Sbjct: 516 SVERLPNGILRVGVHIADVSYFVLPDSALDKEAQARSTSVYLLRGKLPMLPPLLSENLGS 575
Query: 360 LNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLG 419
LNPGVDRLAF+IFW+LNS GDV DRWIGRTVI+SCCKLSY+HAQ+++DG E+ NT G
Sbjct: 576 LNPGVDRLAFTIFWELNSTGDVTDRWIGRTVIQSCCKLSYQHAQEMVDGVIREEACNTFG 635
Query: 420 EGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSV 479
PQLYG F+WSDV+RS+KSL E+SK L++KRF DGAL+LE+SK FLFDEYG PYDSV
Sbjct: 636 NSLPQLYGPFDWSDVIRSVKSLNEISKTLREKRFNDGALQLESSKIGFLFDEYGIPYDSV 695
Query: 480 LSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ 539
L GR+D +FL EEFMLLAN+TAAEVI+RAFPDSALLRRHPAPNMRKLREFEAFC KHGLQ
Sbjct: 696 LCGRKDSDFLVEEFMLLANRTAAEVISRAFPDSALLRRHPAPNMRKLREFEAFCCKHGLQ 755
Query: 540 LDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD-TDWGHYA 598
LD+SSSG FHQSLE R KLKDD VL IL++YA+RPMQLA+YFCSG KD+ DWGHYA
Sbjct: 756 LDSSSSGNFHQSLECIRGKLKDDSVLCGILMSYASRPMQLATYFCSGVMKDNMNDWGHYA 815
Query: 599 LAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIF 658
LA +YTHFTSPLRRYPD++VHRTL AA+EAE+LY + RR+ K + V R TGI+
Sbjct: 816 LAVALYTHFTSPLRRYPDIIVHRTLAAAIEAEELYMRSRRISCKAGMGDKVM-RCFTGIY 874
Query: 659 YDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILL 718
+DKDAAES+EG+EALS AA K+ +PC + L NV +CNDRKLA R+VKDAC KLYMW LL
Sbjct: 875 FDKDAAESVEGKEALSAAASKHRIPCTESLANVVAYCNDRKLASRHVKDACDKLYMWALL 934
Query: 719 KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVLSLCAHK 778
K+KEVLLS+ARVL LGPRFM+IYI+KLAIERRIYY+EVEGL VEWLE TSTLVL+LC++K
Sbjct: 935 KRKEVLLSDARVLGLGPRFMSIYIQKLAIERRIYYEEVEGLTVEWLEATSTLVLNLCSYK 994
Query: 779 RSFKRGGPGNYRALEEVALVVRPNDLKEEHGMFGGSVNKCFTTDANAKRQCS---GSSSN 835
R+F+R G G YR L+E A VV P LK E M G S +C D++ + S S
Sbjct: 995 RAFRRSGSGFYRELDEFAWVVSPCSLKLEADMVGESPKECRIADSDNNGKASQHIDPISE 1054
Query: 836 SGVDPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGVRLYMSSYM 879
S +DP VFP+T+ LLSTIPVAL+A+GG D P+EIGVR++ SSY+
Sbjct: 1055 SKIDPVVFPITVRLLSTIPVALHAVGGDDRPIEIGVRVFASSYL 1098
>gi|359492408|ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vitis vinifera]
Length = 1131
Score = 1117 bits (2889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/897 (63%), Positives = 691/897 (77%), Gaps = 26/897 (2%)
Query: 1 MKG---FSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYS---NCTLLSEKGIHHD 54
MKG F NN+ + ED NL ++ + D KGK KVDV+ ++ N LL +KG ++
Sbjct: 240 MKGSTVFPNNAGLTEDHNLLSDVTFV-GDSWKGKGKVDVNCDFGHERNHFLLHDKGFPYE 298
Query: 55 DDSSSEAYNQEMIERE--GYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYP 112
D+ A++ E I +E G+N++NGHHP + VS + M+++E++ A I+S+P
Sbjct: 299 DN----AFSAENISQEPMGHNHVNGHHPPVFGPSH-VSCFGERSNMDSLEKICAAINSFP 353
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 172
+KRPTG VV+IIERSPRR +VGFL+V QW + + RK K N++ LS+ D EYIQLTP
Sbjct: 354 SKRPTGSVVAIIERSPRRVAVVGFLSVKQWLSSRVLHRKGTKMNKTYLSLSDSEYIQLTP 413
Query: 173 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
T PK+PKMVV VK L D IKKRLE+GDA++EMELVAA+I +W EES P AHV+H+FGRG
Sbjct: 414 TDPKFPKMVVPVKGLSDCIKKRLEDGDASMEMELVAAQISDWGEESSLPLAHVMHIFGRG 473
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE+EP+I AIL+ENAI S FSPESLSCLP +PW+VPQEE+ R+DLRN CIFTIDPSTA
Sbjct: 474 GEIEPRIAAILFENAIRPSEFSPESLSCLPHIPWKVPQEEIERRRDLRNLCIFTIDPSTA 533
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TDLDDALS+E+LS G RVGVHIAD SYFVLP LD EAQ RSTSVY+LQ K+PMLP L
Sbjct: 534 TDLDDALSVEKLSGGNFRVGVHIADASYFVLPDGVLDREAQSRSTSVYLLQHKLPMLPPL 593
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LSE +GSL PGVDRLAFSIFWD+N AGDVVDRWIGRTVI+SCCKLSYEHAQ IIDG FDV
Sbjct: 594 LSENLGSLIPGVDRLAFSIFWDINLAGDVVDRWIGRTVIQSCCKLSYEHAQGIIDGMFDV 653
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
E S LG PQL+G F+ +V+RSIK LY +SK L+ RF DGAL L+ +K + LFDE+
Sbjct: 654 EGSKILGNDCPQLHGHFKLPEVIRSIKYLYAISKTLRANRFNDGALLLDGAKVILLFDEH 713
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
G PYDS S R+D N L EEFMLLANKTAAE+I+RAFPD+ALLRRHP PN+RKLREFEAF
Sbjct: 714 GVPYDSTFSVRKDSNSLVEEFMLLANKTAAEIISRAFPDNALLRRHPEPNLRKLREFEAF 773
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD- 591
CSKHGL+LDTSSSGQF+ SLEQ REKLK+D VLFDIL++YA+RPMQLA+YFCSGD KD+
Sbjct: 774 CSKHGLELDTSSSGQFNHSLEQIREKLKNDSVLFDILLSYASRPMQLATYFCSGDLKDNK 833
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRG 651
+W HYALA P+YTHFTSPLRRYPD++VHRTL AA+EAE+LY KH + K + E +R
Sbjct: 834 NEWSHYALAVPLYTHFTSPLRRYPDIIVHRTLAAAIEAEELYLKHGAKIQKVKNGEEMR- 892
Query: 652 RFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVK 711
R TGI +DK+AAES+EG++ALSVAA K+ +PC +IL +V +CN+RKLA R+ KD C +
Sbjct: 893 RCFTGIHFDKNAAESVEGQKALSVAASKHRLPCTEILADVVAYCNERKLASRHAKDGCER 952
Query: 712 LYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLV 771
LYMW+LLKKKEVLLSEARVL LGPRFM+IYI KL IERRIYYDEVEGL VEWL+ TSTLV
Sbjct: 953 LYMWVLLKKKEVLLSEARVLGLGPRFMSIYIHKLGIERRIYYDEVEGLTVEWLDATSTLV 1012
Query: 772 LSLCAHKRSFKRGGPGNYRALEEVALVVRPNDLKEEHGMFGGSVNKCFTTD-------AN 824
++L +K S RG G YR LE+VA V+RP +LK+E FG +VN+ T A+
Sbjct: 1013 VNLSTNKCSRWRGNQGKYRQLEDVAWVIRPCNLKQEVDAFGDTVNEWGATTVGRDASVAS 1072
Query: 825 AKRQC---SGSSSNSGVDPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGVRLYMSSY 878
+ +C SG + +DP FPLT+ LSTIPV L+A+GG DGPL+IG RLYM+SY
Sbjct: 1073 LRPRCMSESGVPDANEIDPLFFPLTVRTLSTIPVVLHAVGGDDGPLDIGARLYMNSY 1129
>gi|356551558|ref|XP_003544141.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
Length = 1133
Score = 1117 bits (2889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/904 (62%), Positives = 690/904 (76%), Gaps = 33/904 (3%)
Query: 3 GFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTL----------------- 45
G NN++ +E NL TE + +IC GK+KV YE ++C
Sbjct: 237 GSCNNTATLEGCNLLTEDKEVGGNICNGKAKVGAEYESAHCRSYPGQNKEDADQNSSYRS 296
Query: 46 --LSEKGIHHDDDSSSEAYNQ-EMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIE 102
L EK + +DD +S + N ++ ++ INGHH + DS + S S Q+ NA+E
Sbjct: 297 YPLPEKTMVYDDITSQGSTNHLDLHGMASHDSINGHHCAAPDSIKNNSCSGQS---NALE 353
Query: 103 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSV 162
++ +++S+P+KRPTGRVV+I+ERSPRR+GIVG +NV QW +++ +KD KKN++ +S
Sbjct: 354 KMCLLVNSFPSKRPTGRVVAIMERSPRREGIVGHINVKQWVSFRDTGKKDLKKNKNLIS- 412
Query: 163 PDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQ 222
+ EYIQLTPT PK+P M++LV+ LP+ IKKR++ GD TIEM+LVAA+ID+W EESPFP+
Sbjct: 413 -EHEYIQLTPTDPKFPNMMLLVRKLPNCIKKRMKSGDVTIEMDLVAAQIDDWVEESPFPE 471
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNF 282
AH+L VFGRGGEV+ Q++AIL++NAIC S F PE+LSCLPCVPWEVP +E+ SR DLRN
Sbjct: 472 AHILRVFGRGGEVQTQLDAILFQNAICLSEFLPEALSCLPCVPWEVPLKEIQSRIDLRNL 531
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
CIFTIDPSTATDLDDALSIE L +G RVGVHIADVSYFVLP T LD EAQ RSTSVYML
Sbjct: 532 CIFTIDPSTATDLDDALSIEELPNGNYRVGVHIADVSYFVLPDTPLDSEAQFRSTSVYML 591
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
QRK+PMLP LLSE +GSL+PG DRLA S+ D+N AGDVVDRWIGRTVI SCCKLSYEHA
Sbjct: 592 QRKLPMLPALLSENIGSLSPGGDRLAVSMLLDINLAGDVVDRWIGRTVIHSCCKLSYEHA 651
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
QDIID FD E SN +G+P++YG FEW DV++S+KSLYE+S +LK KRFTDGALRLEN
Sbjct: 652 QDIIDKAFDFEGSNFSEDGYPRVYGHFEWPDVIKSLKSLYEISNVLKQKRFTDGALRLEN 711
Query: 463 SKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
K V LFDE G PYDS+LS R++ NFL EE+MLLAN+ AAEVI RA+PD ALLRRHP PN
Sbjct: 712 PKVVILFDENGVPYDSMLSERKESNFLVEEYMLLANRIAAEVICRAYPDGALLRRHPEPN 771
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
MRKLREF AFC KHGL+L+TSSSGQFH SLEQ REKLK D VL++ILI++ATRPMQLASY
Sbjct: 772 MRKLREFMAFCQKHGLELNTSSSGQFHWSLEQIREKLKGDPVLYNILISFATRPMQLASY 831
Query: 583 FCSGDFKD-DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLP 641
FCSGD KD + +WGHYALA P YTHFTSPLRRYPD++VHRTL A +EAE+LY KH++ L
Sbjct: 832 FCSGDLKDSENEWGHYALAVPFYTHFTSPLRRYPDIIVHRTLLATIEAEELYMKHQKAL- 890
Query: 642 KNNHRE-GVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKL 700
++E V+ R T I +DK AAES+EGREALS AA+K+ VPCA+ L ++A +CN+RKL
Sbjct: 891 -QGYKEVKVQKRCFTDISFDKIAAESMEGREALSAAAVKHSVPCAETLADIAAYCNERKL 949
Query: 701 ACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLI 760
A RNVKDAC KLY+W LLKKKEVLLSEAR+L LGPRFM+IYI+KLAIERRIYYDEVEGL
Sbjct: 950 ASRNVKDACDKLYIWFLLKKKEVLLSEARILGLGPRFMSIYIQKLAIERRIYYDEVEGLT 1009
Query: 761 VEWLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPNDLKEEHGMFGGS----VN 816
VEWLETTSTLVLS+ K +F+RG P +RA EEVAL+ P +L S V+
Sbjct: 1010 VEWLETTSTLVLSMSTSKCAFRRGCPNKWRAFEEVALLTCPYNLDFTMDNSNQSEVMKVD 1069
Query: 817 KCFTTDANAKRQCSGSSSNSGVDPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGVRLYMS 876
T + S + +DP FPLT+ LLSTIPVAL+A+GG DGPL+IGVRLYMS
Sbjct: 1070 DSITAMDREEPISRSDLSETEIDPAFFPLTVCLLSTIPVALHAVGGDDGPLDIGVRLYMS 1129
Query: 877 SYMR 880
SY R
Sbjct: 1130 SYFR 1133
>gi|224082254|ref|XP_002306619.1| predicted protein [Populus trichocarpa]
gi|222856068|gb|EEE93615.1| predicted protein [Populus trichocarpa]
Length = 944
Score = 1116 bits (2887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/886 (63%), Positives = 683/886 (77%), Gaps = 30/886 (3%)
Query: 1 MKGF---SNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNC--TLLSEKGIHHDD 55
MKG SNN S EDSNL EANG +GK K+++ +Y++ +L+ KG ++
Sbjct: 82 MKGSNEPSNNLSTAEDSNLHLEANGKAGGSRQGKIKLNMDCKYADFGNSLVPHKGFYYGY 141
Query: 56 DSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKR 115
S GYNY NG+H S SDS+ S Q++ +N + R+ +MISSYP+KR
Sbjct: 142 SSL------------GYNYANGYHQSPSDSSHVAHSMGQSEVLNGVGRMCSMISSYPSKR 189
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PT RVV+IIE+SPRRD I+GFLNV QWF YK G +KDAKKN+S S+ + EYI++ P P
Sbjct: 190 PTCRVVAIIEKSPRRDAIIGFLNVKQWFYYKEGCKKDAKKNKSLPSISNCEYIEIMPADP 249
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
++PK++VLV LP+ IKKRLE+ D T+EME+VAA+ID+W++ESPFP+AHV ++FGRG E+
Sbjct: 250 RFPKLMVLVSSLPNCIKKRLEDEDETVEMEMVAAQIDKWSDESPFPEAHVSYIFGRGSEM 309
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
E QINAIL+ENA+CCS FSPESLSCLP WEVP+EE +R+DLRN CIFTIDPS ATDL
Sbjct: 310 ESQINAILHENAVCCSEFSPESLSCLPSNTWEVPEEEFQNRRDLRNLCIFTIDPSIATDL 369
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS++RL +G+ RVGVHI DVSYFVLP TALD EAQ+RSTSVYM QRKIPMLP LLS+
Sbjct: 370 DDALSVQRLPNGLVRVGVHITDVSYFVLPDTALDKEAQIRSTSVYMSQRKIPMLPPLLSK 429
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+VGSLNPGVDRLAFSIFW+LNS+G+VVDRWIGRTVIRSCCKLSYEHA++I DG D E+
Sbjct: 430 DVGSLNPGVDRLAFSIFWNLNSSGNVVDRWIGRTVIRSCCKLSYEHAREIFDGMIDAETH 489
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTP 475
N + PQL+G FEW+DV+ SIK L+E+SK L++KRF DGAL+LE+ K VF FD++G P
Sbjct: 490 NNFRD-LPQLHGHFEWADVIGSIKCLHEISKTLREKRFDDGALQLESCKIVFSFDKHGVP 548
Query: 476 YDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSK 535
YD+ L GR+D NFL EEFMLLAN+TAAE+I+RAFPD+ALLRRHP PN++KL+EFEAFC K
Sbjct: 549 YDNTLCGRKDSNFLVEEFMLLANRTAAEIISRAFPDNALLRRHPEPNIQKLKEFEAFCCK 608
Query: 536 HGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD-TDW 594
HGL+LDT SSG F +SLE +EKLKDD VL +ILINYA+RPMQLA+YFCSGD KD+ DW
Sbjct: 609 HGLELDT-SSGNFRRSLEHIKEKLKDDSVLLNILINYASRPMQLATYFCSGDLKDNMNDW 667
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
GHYALA P+YTHFTSPLRRYPD+VVHRTL AA+EAE+LY +RRM K E V R
Sbjct: 668 GHYALAVPLYTHFTSPLRRYPDIVVHRTLAAAIEAEQLYMMNRRMSHKVRPGEEVT-RCF 726
Query: 655 TGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYM 714
TGI + KDAA S EGREALS AALK+ +PC +L +VA + N+RKLA R+VKDAC KLYM
Sbjct: 727 TGICFLKDAAGSSEGREALSAAALKHRIPCTKLLTDVAAYSNERKLASRHVKDACDKLYM 786
Query: 715 WILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVLSL 774
W+ +K+KEVLLS+ARVL LGPRFM+IYI KLA ERRIYYDEVEGL VEWLE TSTLVLS+
Sbjct: 787 WVSVKRKEVLLSDARVLGLGPRFMSIYIHKLAFERRIYYDEVEGLTVEWLEATSTLVLSI 846
Query: 775 CAHKRSFKRGGPGNYRALEEVALVVRPNDLKEEHGMFGGSVNKCFTTDANAKRQCSGSSS 834
A K S +R GPG YRAL+EVA V+ P D E M S C Q S
Sbjct: 847 HASKCSARRAGPGYYRALDEVAWVINPCDHNMEPDM--ESTQGCHAA------QHSDPIL 898
Query: 835 NSGVDPGVFPLTIPLLSTIPVALNAIGG-GDGPLEIGVRLYMSSYM 879
S +DP VFPLT+ LLSTIPVAL+A GG DGP IG RL+MSSY
Sbjct: 899 KSEIDPFVFPLTVRLLSTIPVALHATGGDDDGPRNIGARLFMSSYF 944
>gi|356550838|ref|XP_003543790.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
Length = 1184
Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/914 (61%), Positives = 691/914 (75%), Gaps = 57/914 (6%)
Query: 3 GFSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSN-------------------C 43
G NN++ E NL TE + +ICKGK+KVD YE ++
Sbjct: 290 GSCNNTATPEGCNL-TEDKEVGGNICKGKAKVDAEYESAHGRSYPGQNKEDADQNSLYKS 348
Query: 44 TLLSEKGIHHDDDSSSEAYNQ-EMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIE 102
+E + +DD +S + N ++ ++ INGHH + +S + S S Q+ NA+E
Sbjct: 349 YPFTETTMVYDDITSRGSTNHLDLHGMANHDSINGHHCAAPNSLKINSCSGQS---NAVE 405
Query: 103 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSV 162
++ +++S+P+KRPTGRVV+IIERSPRR+GIVG +NV QW +++ S+KD KKN++ +S
Sbjct: 406 KMCLLVNSFPSKRPTGRVVAIIERSPRREGIVGHINVKQWVSFRDTSKKDVKKNKNLIS- 464
Query: 163 PDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQ 222
+ EYIQL PT PK+P M++LV+ LP IKKR++ GD TI+M+LVA +ID+W EESPFP+
Sbjct: 465 -EHEYIQLIPTDPKFPNMMLLVRKLPKCIKKRMKSGDVTIQMDLVAVQIDDWVEESPFPE 523
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNF 282
AH+L VFG+GGEV+ Q++AIL++NAIC S FSPE+LSCLPCVPWE+P +E+ SR DLRN
Sbjct: 524 AHILRVFGQGGEVQTQLDAILFQNAICLSEFSPEALSCLPCVPWEIPLKEIQSRIDLRNL 583
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
CIFTIDPSTATDLDDALSIE+L +G RVGVHIADVSYFVLP TALD EA+ RSTSVYML
Sbjct: 584 CIFTIDPSTATDLDDALSIEKLPNGNYRVGVHIADVSYFVLPDTALDNEAKFRSTSVYML 643
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
QRK+PMLP LLSE +GSL+PGVDRLA S+ D+N AGDVVDRWIGRTVI+SCCKLSYEHA
Sbjct: 644 QRKLPMLPALLSENIGSLSPGVDRLAVSMLLDINVAGDVVDRWIGRTVIQSCCKLSYEHA 703
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
QDIID FD E SN + +G+P++YG FEW DV+ S++SLYE+S +LK KRFTDGALRLEN
Sbjct: 704 QDIIDKAFDFEGSNFIEDGYPRVYGHFEWPDVIMSLESLYEISNVLKQKRFTDGALRLEN 763
Query: 463 SKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
K V LFDE G PYDS LS R++ NFL EE+MLLAN+ AAEVI RA+PD ALLRRHP PN
Sbjct: 764 PKVVILFDENGVPYDSRLSERKESNFLVEEYMLLANRIAAEVICRAYPDGALLRRHPEPN 823
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
MRKLREF AFC KHGL+L+TSSSG+ H SLEQ REKLK D VL++ILI+YATRPMQLASY
Sbjct: 824 MRKLREFMAFCQKHGLELNTSSSGELHWSLEQIREKLKGDPVLYNILISYATRPMQLASY 883
Query: 583 FCSGDFKD-DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLP 641
FCSGD KD + +WGHYALA P YTHFTSPLRRYPD++VHRTL A +EAE+LY KH++ L
Sbjct: 884 FCSGDLKDSENEWGHYALAVPFYTHFTSPLRRYPDIIVHRTLLATIEAEELYMKHQKAL- 942
Query: 642 KNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLA 701
+ + V+ R TGI +DK AAES EGREALS AA+K+ VPCA+ L ++AT+CN RKLA
Sbjct: 943 QGSKEVKVQKRCFTGINFDKSAAESTEGREALSAAAVKHSVPCAETLADIATYCNGRKLA 1002
Query: 702 CRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
RNVKDAC KLY+W LLKKKEVLLSEAR+L LGPRFM+IYI+KLAIERRIYYDEV+GL V
Sbjct: 1003 SRNVKDACDKLYIWFLLKKKEVLLSEARILGLGPRFMSIYIQKLAIERRIYYDEVQGLTV 1062
Query: 762 EWLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPNDLKEEHGMFGGSVNKCFTT 821
EWLETTSTLVLS+ +K +++RG P R EEVAL+ P +L FTT
Sbjct: 1063 EWLETTSTLVLSMSTNKCAYRRGCPNKLRPFEEVALLTCPYNLD-------------FTT 1109
Query: 822 D---------------ANAKRQCSGSSS-NSGVDPGVFPLTIPLLSTIPVALNAIGGGDG 865
D A + S S + + +DP FPLT+ LLSTIPVAL+A+GG DG
Sbjct: 1110 DNSNPSEVMKVDDSISAMDREPISRSDALETLIDPAFFPLTVRLLSTIPVALHAVGGDDG 1169
Query: 866 PLEIGVRLYMSSYM 879
PL+IGVRLYMSSY+
Sbjct: 1170 PLDIGVRLYMSSYI 1183
>gi|449446430|ref|XP_004140974.1| PREDICTED: DIS3-like exonuclease 2-like [Cucumis sativus]
Length = 1125
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/893 (59%), Positives = 658/893 (73%), Gaps = 22/893 (2%)
Query: 1 MKGFS---NNSSIVEDSNLPTEANGMHSDICKGKSKVD--VSYEYSNCTLLSEKGIHHDD 55
MKG S NN +ED+NLP E + CKGK+KVD V + T L +K +D
Sbjct: 242 MKGTSEAHNNMHSMEDANLPAELTEKNDHNCKGKNKVDADVKSDSFRSTSLPDKRCCSED 301
Query: 56 DSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKR 115
++ Y + + S + ++ SS Q+D AI R+ A+I+ YP KR
Sbjct: 302 KVLDGVACDVLLS--NYEQCDINELSVVNPSQAHHSSNQDDVSKAIGRICALINLYPAKR 359
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV+I+E+S R+ +VG LNV ++ +++ K++ K+ S S + Y+QL P
Sbjct: 360 PTGRVVTILEKSRLRENVVGHLNVKKFLSFQEFYVKESTKSCLSPS-QNCGYVQLMPNDA 418
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
++P M+VL DLP+ IKKRL+ GD T+E ELVAARI EW +ES P+AHVLHV GRG EV
Sbjct: 419 RFPIMMVLAGDLPNCIKKRLDNGDVTVENELVAARIYEWVKESSSPRAHVLHVLGRGNEV 478
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
E I+AIL+ENAI FS +SLSC+P PW++P EEL R+D+RN CIFTIDPS+A+DL
Sbjct: 479 ESHIDAILFENAIRTCEFSQDSLSCVPQTPWKIPPEELQCRRDIRNLCIFTIDPSSASDL 538
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS++RL++GI RVG+HIADVSYFVLP TALD EAQ+RSTSVY+LQRKIPMLP LLSE
Sbjct: 539 DDALSVQRLANGIFRVGIHIADVSYFVLPDTALDKEAQIRSTSVYLLQRKIPMLPPLLSE 598
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+GSLNPGVDRLAFS+F D+NS GDV D WI RTVI CCKLSYEHAQDIIDG D +SS
Sbjct: 599 SIGSLNPGVDRLAFSLFLDINSCGDVKDFWIERTVICCCCKLSYEHAQDIIDGLIDSDSS 658
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTP 475
G PQL+GQF W DV+ S+K L+E+SK +K+KRF +GALRLENSK ++L+DEYG P
Sbjct: 659 ELFGNNCPQLHGQFTWHDVISSVKLLHEISKTVKEKRFRNGALRLENSKLIYLYDEYGIP 718
Query: 476 YDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSK 535
YDS+ ++D NFL EEFMLLAN+T AEVI+R FPDSALLRRHP P +RKLREFE FCSK
Sbjct: 719 YDSMFYEQKDSNFLVEEFMLLANRTVAEVISRTFPDSALLRRHPEPMLRKLREFETFCSK 778
Query: 536 HGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWG 595
HG +LDTSSS F QSLEQ R +L+DD +LFDILI+YATRPMQLA+YFCSG+ KD
Sbjct: 779 HGFELDTSSSVHFQQSLEQIRIELQDDPLLFDILISYATRPMQLATYFCSGELKDGETRS 838
Query: 596 HYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLT 655
HYALA P+YTHFTSPLRRYPD+VVHRTL AA+EAEK+Y KH+ ++ K N E R T
Sbjct: 839 HYALAVPLYTHFTSPLRRYPDIVVHRTLAAAIEAEKMYLKHKGVIQKVNSNE--ETRCFT 896
Query: 656 GIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMW 715
GI++DKDAA+SLEGREALS AALK+GVPC+ +L++VA HCNDRKLA ++V D KLYMW
Sbjct: 897 GIYFDKDAADSLEGREALSSAALKHGVPCSKLLLDVALHCNDRKLASKHVADGIEKLYMW 956
Query: 716 ILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVLSLC 775
LLKKK++L S+ARVL LGPRFM++YI+KLAIERRIYYDEVEGL VEWLETTSTLVL
Sbjct: 957 ALLKKKKILFSDARVLGLGPRFMSVYIQKLAIERRIYYDEVEGLAVEWLETTSTLVLRFF 1016
Query: 776 AHKRSFKRGGPGNYRALEEVALVVRPNDLKEEHGMFGGSVN--------KCFTTDANAKR 827
+RS + G ++ALE+VALV+ P D + G S N D+N K
Sbjct: 1017 CSRRSHRSRGSVKWKALEDVALVISPCDQNVKERTLGVSSNGGASKGGSAVVEQDSNLKS 1076
Query: 828 QCSGSSSNSGVDPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGVRLYMSSYMR 880
S++GVDP +FPLT+ LLSTIPVAL+A+GG DGP++IGVRLYMSSY+R
Sbjct: 1077 HV----SDTGVDPAIFPLTVRLLSTIPVALHAVGGDDGPIDIGVRLYMSSYLR 1125
>gi|449499475|ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like exonuclease 2-like [Cucumis
sativus]
Length = 1159
Score = 1032 bits (2669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/893 (59%), Positives = 657/893 (73%), Gaps = 23/893 (2%)
Query: 1 MKGFS---NNSSIVEDSNLPTEANGMHSDICKGKSKVD--VSYEYSNCTLLSEKGIHHDD 55
MKG S NN +ED+NLP E + CKGK+KVD V + T L +K +D
Sbjct: 277 MKGTSEAHNNMHSMEDANLPAELTEKNDHNCKGKNKVDADVKSDSFRSTSLPDKRCCSED 336
Query: 56 DSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKR 115
++ Y + + S + ++ SS Q+D AI R+ A+I+ YP KR
Sbjct: 337 KVLDGVACDVLLS--NYEQCDINELSVVNPSQAHHSSNQDDVSKAIGRICALINLYPAKR 394
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV+I+E+S R+ +VG LNV ++ +++ K++ K+ S S + Y+QL P
Sbjct: 395 PTGRVVTILEKSRLRENVVGHLNVKKFLSFQEFYVKESTKSCLSPS-QNCGYVQLMPNDA 453
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
++P M+VL DLP+ IKKRL+ GD T+E ELVAARI EW +ES P+AHVLHV GRG EV
Sbjct: 454 RFPIMMVLAGDLPNCIKKRLDNGDVTVENELVAARIYEWVKESSSPRAHVLHVLGRGNEV 513
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
E I+AIL+ENA FS +SLSC+P PW++P EEL R+D+RN CIFTIDPS+A+DL
Sbjct: 514 ESHIDAILFENAFRTCEFSQDSLSCVPQTPWKIPPEELQCRRDIRNLCIFTIDPSSASDL 573
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS++RL++GI RVG+HIADVSYFVLP TALD EAQ+RSTSVY+LQRKIPMLP LLSE
Sbjct: 574 DDALSVQRLANGIFRVGIHIADVSYFVLPDTALDKEAQIRSTSVYLLQRKIPMLPPLLSE 633
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+GSLNPGVDRLAFS+F D+NS GDV D WI RTVI CCKLSYEHAQDIIDG D +SS
Sbjct: 634 SIGSLNPGVDRLAFSLFLDINSCGDVKDFWIERTVICCCCKLSYEHAQDIIDGLIDSDSS 693
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTP 475
G PQL+GQF W DV+ S+K L+E+SK +K+KRF +GALRLENSK ++L+DEYG P
Sbjct: 694 ELFGNNCPQLHGQFTWHDVISSVKLLHEISKTVKEKRFRNGALRLENSKLIYLYDEYGIP 753
Query: 476 YDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSK 535
YDS+ ++D NFL EEFMLLAN+T AEVI+R FPDSALLRRHP P +RKLREFE FCSK
Sbjct: 754 YDSMFYEQKDSNFLVEEFMLLANRTVAEVISRTFPDSALLRRHPEPMLRKLREFETFCSK 813
Query: 536 HGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWG 595
HG +LDTSSS F QSLEQ R +L+DD +LFDILI+YATRPMQLA+YFCSG+ KD
Sbjct: 814 HGFELDTSSSVHFQQSLEQIRIELQDDPLLFDILISYATRPMQLATYFCSGELKDGETRS 873
Query: 596 HYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLT 655
HYALA P+YTHFTSPLRRYPD+VVHRTL AA+EAEK+Y KH+ ++ K N E R T
Sbjct: 874 HYALAVPLYTHFTSPLRRYPDIVVHRTLAAAIEAEKMYLKHKGVIQKVNSNE--ETRCFT 931
Query: 656 GIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMW 715
GI++DKDAA+SLEGREALS AALK+GVPC+ +L++VA HCNDRKLA ++V D KLYMW
Sbjct: 932 GIYFDKDAADSLEGREALSSAALKHGVPCSKLLLDVALHCNDRKLASKHVADGIEKLYMW 991
Query: 716 ILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVLSLC 775
LLKKK++L S+ARVL LGPRFM++YI+KLAIERRIYYDEVEGL VEWLETTSTLVL C
Sbjct: 992 ALLKKKKILFSDARVLGLGPRFMSVYIQKLAIERRIYYDEVEGLAVEWLETTSTLVLRFC 1051
Query: 776 AHKRSFKRGGPGNYRALEEVALVVRPNDLKEEHGMFGGSVN--------KCFTTDANAKR 827
+ + RG ++ALE+VALV+ P D + G S N D+N K
Sbjct: 1052 SRRSHRSRGSV-KWKALEDVALVISPCDQNVKERTLGVSSNGGASKGGSAVVEQDSNLKS 1110
Query: 828 QCSGSSSNSGVDPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGVRLYMSSYMR 880
S++GVDP +FPLT+ LLSTIPVAL+A+GG DGP++IGVRLYMSSY+R
Sbjct: 1111 HV----SDTGVDPAIFPLTVRLLSTIPVALHAVGGDDGPIDIGVRLYMSSYLR 1159
>gi|357488975|ref|XP_003614775.1| DIS3-like exonuclease [Medicago truncatula]
gi|355516110|gb|AES97733.1| DIS3-like exonuclease [Medicago truncatula]
Length = 1162
Score = 1019 bits (2634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/903 (56%), Positives = 659/903 (72%), Gaps = 37/903 (4%)
Query: 1 MKG---FSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCT------------- 44
MKG +NN++++E NL E N + C+G KVD +EYS
Sbjct: 217 MKGPNVANNNTAVLEGCNLLVEDNIAGDNNCEGIEKVDADHEYSGQNKEESFDNSSPYRS 276
Query: 45 --LLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIE 102
++ I+ ++ + + +I G + +G + + S + S S Q++ MNA+E
Sbjct: 277 YPFPEKRYIYENNTTQGSPNHLSLIGLTGRDNNDGPNCDSPASIKINSGSGQSEVMNAVE 336
Query: 103 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSV 162
++ +++S+P+KRPTGRVV++IERSPRR+ IVG LNV QW + ++KD +KN++S+S
Sbjct: 337 KICLLVNSFPSKRPTGRVVAVIERSPRRECIVGHLNVKQWVFSQEINKKDPRKNKNSVS- 395
Query: 163 PDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQ 222
+ EYIQLTP PK+P +++LV+DLP SIK RL+ GDA IE +LVAA+I +W EESPFP+
Sbjct: 396 -EHEYIQLTPIDPKFPNIMLLVRDLPKSIKIRLKNGDAAIEKDLVAAQIVDWFEESPFPE 454
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNF 282
+L FGRG E++P +++IL++NAIC S FS E+LSCLP WE+P +EL SR DLRN
Sbjct: 455 GDILQHFGRGSEIQPNLDSILFKNAICLSEFSAEALSCLPHATWELPLKELQSRTDLRNL 514
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
CIF+IDPSTATDLDDALSIE+L +G RVG+HIADVSYFVLP TALD+EAQ RSTSVY+L
Sbjct: 515 CIFSIDPSTATDLDDALSIEKLPNGNYRVGIHIADVSYFVLPDTALDVEAQFRSTSVYLL 574
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
Q+K+PML L+SE +GSLNPGVDRLAFS+ DLN AGDVVDRWIGRTVI+SCCKLSYEHA
Sbjct: 575 QKKLPMLSALISENIGSLNPGVDRLAFSMLLDLNVAGDVVDRWIGRTVIQSCCKLSYEHA 634
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
QDIIDG F+ ESS+ +G+P+L+G+F W DV+ S+KSLYE+S +LK KRF GALRL+
Sbjct: 635 QDIIDGAFNFESSSFHEDGYPKLHGRFGWPDVITSLKSLYEISNVLKHKRFAGGALRLDK 694
Query: 463 SKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
K V L DE G PY+S S +++ N L EE+MLLAN TAAE+I RA+PD ALLRRHP PN
Sbjct: 695 PKIVILSDENGIPYNSTFSEQKESNLLIEEYMLLANTTAAEIICRAYPDVALLRRHPEPN 754
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
MRKLREF AFC KHGL LDTSSSG SLEQ +EKLKDD VL+DILI+YA++ MQ ASY
Sbjct: 755 MRKLREFTAFCQKHGLNLDTSSSGHIRSSLEQMKEKLKDDPVLYDILISYASKLMQSASY 814
Query: 583 FCSGDFKDDT-DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLP 641
FCS D KD+ +WGHYALA P+YTHFTSPLRRY D+VVHRTL A +EAE++Y K
Sbjct: 815 FCSSDLKDNEHEWGHYALAVPLYTHFTSPLRRYADIVVHRTLLATIEAEEIYLKQV---- 870
Query: 642 KNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLA 701
+ GV R TGI +DK AES+E REAL AALK+ VP A+IL ++A HCNDRKLA
Sbjct: 871 --GKKMGVEKRCFTGINFDKKTAESVECREALMAAALKHRVPSAEILADIAAHCNDRKLA 928
Query: 702 CRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+ VKD+C +LYMW LLK+++V+LSEARVL LGP+FM+IYI+KLA+E+RIYYDEVEGL
Sbjct: 929 SKYVKDSCERLYMWFLLKQQKVILSEARVLGLGPKFMSIYIQKLAVEKRIYYDEVEGLTA 988
Query: 762 EWLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPNDLKEEHGMFGGSVNKCFTT 821
EWL+ TSTLVLS+ +KR+ +R GN+RAL E ++ P DLK M + N
Sbjct: 989 EWLDATSTLVLSMSPNKRANRR---GNWRALSESVMLACPYDLKVT--MDNSNQNDAIEV 1043
Query: 822 DA-----NAKRQCSGSSSNSGVDPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGVRLYMS 876
DA + + +S + ++P FPLT+ LLSTIPVAL+A+GG DGPL+ GVRLYM+
Sbjct: 1044 DAAVSDTDKHHDSTSETSETEIEPSFFPLTVHLLSTIPVALHAVGGDDGPLDFGVRLYMT 1103
Query: 877 SYM 879
SY
Sbjct: 1104 SYF 1106
>gi|302141847|emb|CBI19050.3| unnamed protein product [Vitis vinifera]
Length = 1007
Score = 1008 bits (2605), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/824 (61%), Positives = 619/824 (75%), Gaps = 67/824 (8%)
Query: 56 DSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKR 115
++++E +QE + G+N++NGHHP + VS + M+++E++ A I+S+P+KR
Sbjct: 248 NNAAENISQEPM---GHNHVNGHHPPVFGPSH-VSCFGERSNMDSLEKICAAINSFPSKR 303
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTG VV+IIERSPRR +VGFL+V QW + + RK K N++ LS+ D EYIQLTPT P
Sbjct: 304 PTGSVVAIIERSPRRVAVVGFLSVKQWLSSRVLHRKGTKMNKTYLSLSDSEYIQLTPTDP 363
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
K+PKMVV VK L D IKKRLE+GDA++EMELVAA+I +W EES P AHV+H+FGRGGE+
Sbjct: 364 KFPKMVVPVKGLSDCIKKRLEDGDASMEMELVAAQISDWGEESSLPLAHVMHIFGRGGEI 423
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
EP+I AIL+ENAI S FSPESLSCLP +PW+VPQEE+ R+DLRN CIFTIDPSTATDL
Sbjct: 424 EPRIAAILFENAIRPSEFSPESLSCLPHIPWKVPQEEIERRRDLRNLCIFTIDPSTATDL 483
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS+E+LS G RVGVHIAD SYFVLP LD EAQ RSTSVY+LQ K+PMLP LLSE
Sbjct: 484 DDALSVEKLSGGNFRVGVHIADASYFVLPDGVLDREAQSRSTSVYLLQHKLPMLPPLLSE 543
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+GSL PGVDRLAFSIFWD+N AGDVVDRWIGRTVI+SCCKLSYEHAQ IIDG FDVE
Sbjct: 544 NLGSLIPGVDRLAFSIFWDINLAGDVVDRWIGRTVIQSCCKLSYEHAQGIIDGMFDVE-- 601
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTP 475
V+RSIK LY +SK L+ RF DGAL L+ +K + LFDE+G
Sbjct: 602 ------------------VIRSIKYLYAISKTLRANRFNDGALLLDGAKVILLFDEHG-- 641
Query: 476 YDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSK 535
TAAE+I+RAFPD+ALLRRHP PN+RKLREFEAFCSK
Sbjct: 642 ------------------------TAAEIISRAFPDNALLRRHPEPNLRKLREFEAFCSK 677
Query: 536 HGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD-TDW 594
HGL+LDTSSSGQF+ SLEQ REKLK+D VLFDIL++YA+RPMQLA+YFCSGD KD+ +W
Sbjct: 678 HGLELDTSSSGQFNHSLEQIREKLKNDSVLFDILLSYASRPMQLATYFCSGDLKDNKNEW 737
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HYALA P+YTHFTSPLRRYPD++VHRTL AA+EAE+LY KH + K + E +R R
Sbjct: 738 SHYALAVPLYTHFTSPLRRYPDIIVHRTLAAAIEAEELYLKHGAKIQKVKNGEEMR-RCF 796
Query: 655 TGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYM 714
TGI +DK+AAES+EG++ALSVAA K+ +PC +IL +V +CN+RKLA R+ KD C +LYM
Sbjct: 797 TGIHFDKNAAESVEGQKALSVAASKHRLPCTEILADVVAYCNERKLASRHAKDGCERLYM 856
Query: 715 WILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVLSL 774
W+LLKKKEVLLSEARVL LGPRFM+IYI KL IERRIYYDEVEGL VEWL+ TSTLV++L
Sbjct: 857 WVLLKKKEVLLSEARVLGLGPRFMSIYIHKLGIERRIYYDEVEGLTVEWLDATSTLVVNL 916
Query: 775 CAHKRSFKRGGPGNYRALEEVALVVRPNDLKEEHGMFGGSVNKCFTTDANAKRQCSGSSS 834
+K S RG G YR LE+VA V+RP +LK+E V+ C + SG
Sbjct: 917 STNKCSRWRGNQGKYRQLEDVAWVIRPCNLKQE-------VDACMSE--------SGVPD 961
Query: 835 NSGVDPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGVRLYMSSY 878
+ +DP FPLT+ LSTIPV L+A+GG DGPL+IG RLYM+SY
Sbjct: 962 ANEIDPLFFPLTVRTLSTIPVVLHAVGGDDGPLDIGARLYMNSY 1005
>gi|224066863|ref|XP_002302251.1| predicted protein [Populus trichocarpa]
gi|222843977|gb|EEE81524.1| predicted protein [Populus trichocarpa]
Length = 860
Score = 1004 bits (2597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/749 (65%), Positives = 602/749 (80%), Gaps = 28/749 (3%)
Query: 1 MKG--FSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLLSEKGIHHDDDSS 58
MKG +N+ EDSNL EANG +D + N +L+ +KGIH+D+ +
Sbjct: 136 MKGSNVPSNNPTAEDSNLHLEANGKCAD-------------FGN-SLVPQKGIHYDETAC 181
Query: 59 SEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTG 118
+ + NY+NG+H S S+S+ V S+ Q++ N++ R+ AM+S YP+KRPTG
Sbjct: 182 AGEVVHD-------NYVNGYHQSASESSLAVPSTGQDEVSNSVGRICAMLSLYPSKRPTG 234
Query: 119 RVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYP 178
RVV+I+E+SPRRD IVGFLNV QWF Y+ G R++AKKN+SSLS+ +REYI++ PT P++P
Sbjct: 235 RVVAIVEKSPRRDVIVGFLNVKQWFYYREGCRQNAKKNKSSLSISNREYIEMMPTDPRFP 294
Query: 179 KMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQ 238
K++VLV LPD IKKRLE DAT+EMELVAA+ID W+++SPFP+AHV +FGRG E+E Q
Sbjct: 295 KLMVLVSVLPDCIKKRLENEDATVEMELVAAQIDNWSDKSPFPEAHVSCIFGRGSEMESQ 354
Query: 239 INAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDA 298
INAIL+ENAICCS FSPESLSCLP WEVP++E+ +RKD+RN CIFTIDPS+ATDLDDA
Sbjct: 355 INAILHENAICCSKFSPESLSCLPSNTWEVPKDEIENRKDIRNLCIFTIDPSSATDLDDA 414
Query: 299 LSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVG 358
LS+++L +G+ RVGVHIADVSYFVLP TALD+EAQ RSTSVYML+RKIPMLP LLSE +G
Sbjct: 415 LSVQKLPNGLVRVGVHIADVSYFVLPDTALDMEAQFRSTSVYMLRRKIPMLPPLLSENLG 474
Query: 359 SLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTL 418
SLNPGVDRLAFSIFWD NS+G+VVDRWI RTVI+SCCKLSYEHAQ I+DG D E+ NT
Sbjct: 475 SLNPGVDRLAFSIFWDFNSSGNVVDRWIDRTVIQSCCKLSYEHAQGIVDGMIDTETCNTF 534
Query: 419 GEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDS 478
G+ PQL+G FEW+DV+ S+ L+E+SK L++KRF +GALRLE+SK VFLFDEYG PYDS
Sbjct: 535 GDSLPQLHGHFEWADVIGSVVCLHEISKTLREKRFDNGALRLESSKIVFLFDEYGIPYDS 594
Query: 479 VLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGL 538
L R+D NF+ EEFMLLAN TAAE+I+RAFPDSALLRRHP PNMRKLREFEAFC KHGL
Sbjct: 595 SLCERKDSNFIVEEFMLLANFTAAEIISRAFPDSALLRRHPEPNMRKLREFEAFCCKHGL 654
Query: 539 QLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD-TDWGHY 597
+LDT SSG F QSLE+ +EKLKDD LF+ILINYA+RPMQLA+YFCSGD KD+ DWGHY
Sbjct: 655 ELDT-SSGNFQQSLERIKEKLKDDPELFNILINYASRPMQLATYFCSGDLKDNMNDWGHY 713
Query: 598 ALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRG-RFLTG 656
ALA P+YTHFTSPLRRYPD+VVHRTL AA+EAE+LY RRM K R G G R TG
Sbjct: 714 ALAVPLYTHFTSPLRRYPDIVVHRTLAAAIEAEQLYMMDRRMSLKA--RPGEEGTRCFTG 771
Query: 657 IFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWI 716
I + KD AES EG+EALS AALK+ +PC ++L +VA +CN+RKLA R+VKDAC KLYMW+
Sbjct: 772 ICFCKDVAESAEGKEALSAAALKHRIPCPELLSHVAAYCNERKLASRHVKDACDKLYMWV 831
Query: 717 LLKKKEVLLSEARVLALGPRFMTIYIEKL 745
+K+KEVLLS+ARVL LGPRFM+IYI KL
Sbjct: 832 SVKRKEVLLSDARVLGLGPRFMSIYINKL 860
>gi|297842545|ref|XP_002889154.1| ribonuclease II family protein [Arabidopsis lyrata subsp. lyrata]
gi|297334995|gb|EFH65413.1| ribonuclease II family protein [Arabidopsis lyrata subsp. lyrata]
Length = 1062
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/880 (56%), Positives = 617/880 (70%), Gaps = 49/880 (5%)
Query: 1 MKGFSNNS-SIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCTLLSEKGIHHDDDSSS 59
MKGF S + +E +N P E + ++ + K+ +DV + + L
Sbjct: 228 MKGFVTESVAKLEGTNSPPEKDDKNA---RQKNAIDVVEGFEDGFL-------------- 270
Query: 60 EAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGR 119
A N +I + N + DS S +Q + +E+L ++SS+P KRPTG+
Sbjct: 271 -ANNSSVIGQGAKNGVTRSSSPLLDSCLG-SFCEQKGNCSVVEKLCGILSSFPHKRPTGQ 328
Query: 120 VVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPK 179
VV+++E+S RD IVG L+V W +YK DAK+ +S +S+ D EY+QL P P++PK
Sbjct: 329 VVAVVEKSLVRDSIVGLLDVKGWIHYK---ESDAKRCKSPMSLSDDEYVQLMPADPRFPK 385
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
++V LP SI+ RLE D T+E ELVAA+I +W E SPFP A + H+FGRG E+EPQI
Sbjct: 386 LIVPFHVLPGSIRARLENLDPTLEAELVAAQIVDWGEGSPFPVAQITHLFGRGSELEPQI 445
Query: 240 NAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDAL 299
NAILY+N++C S FSP SL+ LP VPWEVP+EE+ RKDLR+ C+ TIDPSTATDLDDAL
Sbjct: 446 NAILYQNSVCESDFSPGSLTSLPRVPWEVPEEEVQRRKDLRDQCVLTIDPSTATDLDDAL 505
Query: 300 SIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGS 359
S++ L G RVGVHIADVSYFVLP TALD EAQ RSTSVY+ QRK+ MLP LLSE +GS
Sbjct: 506 SVQSLPGGFFRVGVHIADVSYFVLPETALDTEAQFRSTSVYLRQRKVSMLPPLLSENIGS 565
Query: 360 LNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLG 419
L PG DRL FSIFWDLN GDV+DRWIGRTVIRSCCKLSY+HAQDIIDGK S+
Sbjct: 566 LTPGADRLTFSIFWDLNREGDVIDRWIGRTVIRSCCKLSYDHAQDIIDGK-----SDGAE 620
Query: 420 EGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSV 479
GWP L+G FEWSDV+RS++ L E+S L+ KR +GAL+LENSKPVFLFDE+G PYD V
Sbjct: 621 NGWPALHGSFEWSDVIRSVEQLSEISSTLRQKRLRNGALQLENSKPVFLFDEHGVPYDFV 680
Query: 480 LSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ 539
+ R+ NFL EEFMLLAN TAAEVI++A+P SALLRRHP PN RKL+EFE FCSKHG+
Sbjct: 681 MCSRKGSNFLVEEFMLLANMTAAEVISQAYPASALLRRHPEPNTRKLKEFEGFCSKHGMD 740
Query: 540 LDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD-TDWGHYA 598
LD SSSGQ +SLE+ L+DD V DIL NYA +PMQLASYFC+G+ KD +WGHYA
Sbjct: 741 LDISSSGQLQESLEKITGNLQDDSVFVDILNNYAIKPMQLASYFCTGNLKDSVAEWGHYA 800
Query: 599 LAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIF 658
LA P+YTHFTSPLRRYPD+VVHR + AALEAE+LY K L + + E G TGI
Sbjct: 801 LAVPLYTHFTSPLRRYPDIVVHRAIAAALEAEELYSK----LKQTSIDE--VGSCFTGIH 854
Query: 659 YDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILL 718
++KDAAES+EG+EALSVAALK+GVP +IL +VA +CN+RKLA R V+DAC KLY W +L
Sbjct: 855 FNKDAAESMEGKEALSVAALKHGVPSTEILSDVAAYCNERKLAARKVRDACDKLYTWFVL 914
Query: 719 KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVLSLCAHK 778
KKKEV EARV+ LG RFMT+YI KL IERRIYYD++EGL +WL+ TSTL+L K
Sbjct: 915 KKKEVFPCEARVMNLGSRFMTVYISKLGIERRIYYDQIEGLCADWLDATSTLILD----K 970
Query: 779 RSFKRGGPGNYRALEEVALVVRPNDLKEEHGMFGGSVNKCFTTDANAKRQCSGSSSNSGV 838
KRGG G ++ L+E +V P D V KC + + S + S V
Sbjct: 971 LYSKRGGRGYFKPLKEAVYLVSPCD---------QCVAKCSALSVH-DTESSEAVSKDEV 1020
Query: 839 DPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGVRLYMSSY 878
P VFPLTI L STIPV L+A+GG DGPL+IG RLYMSSY
Sbjct: 1021 APAVFPLTIQLFSTIPVVLHAVGGDDGPLDIGARLYMSSY 1060
>gi|15220899|ref|NP_177891.1| Ribonuclease II/R-like protein [Arabidopsis thaliana]
gi|110737965|dbj|BAF00919.1| putative 3'-5' exoribonuclease [Arabidopsis thaliana]
gi|332197887|gb|AEE36008.1| Ribonuclease II/R-like protein [Arabidopsis thaliana]
Length = 1055
Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/811 (59%), Positives = 590/811 (72%), Gaps = 31/811 (3%)
Query: 71 GYNYINGHHPSTSDSTEKVSSS--QQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSP 128
G NG PS+ S + S +Q +A+++L ++SS+P KRPTG+VV+++E+S
Sbjct: 272 GKGAKNGVTPSSPPSLDSCLGSFCEQKGNCSAVDKLCGILSSFPHKRPTGQVVAVVEKSL 331
Query: 129 RRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLP 188
RD IVG L+V W +YK D K+ +S LS+ D EY+QL P P++PK++V LP
Sbjct: 332 VRDSIVGLLDVKGWIHYK---ESDPKRCKSPLSLSDDEYVQLMPADPRFPKLIVPFHVLP 388
Query: 189 DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAI 248
SI+ RLE D +E ELVAA+I +W E SPFP A + H+FGRG E+EPQINAILY+N++
Sbjct: 389 GSIRARLENLDPNLEAELVAAQIVDWGEGSPFPVAQITHLFGRGSELEPQINAILYQNSV 448
Query: 249 CCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGI 308
C S FSP SL+ LP VPWEVP+EE+ RKDLR+ C+ TIDPSTATDLDDALS++ L G
Sbjct: 449 CDSDFSPGSLTSLPRVPWEVPEEEVQRRKDLRDLCVLTIDPSTATDLDDALSVQSLPGGF 508
Query: 309 SRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 368
RVGVHIADVSYFVLP TALD EA+ RSTSVY++QRKI MLP LLSE VGSL+PG DRLA
Sbjct: 509 FRVGVHIADVSYFVLPETALDTEARFRSTSVYLMQRKISMLPPLLSENVGSLSPGADRLA 568
Query: 369 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 428
FSI WDLN GDV+DRWIGRT+IRSCCKLSY+HAQDIIDGK DV + GWP L+G
Sbjct: 569 FSILWDLNREGDVIDRWIGRTIIRSCCKLSYDHAQDIIDGKSDVAEN-----GWPALHGS 623
Query: 429 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNF 488
F+W DV RS+K L E+S L+ KRF +GAL+LENSKPVFLFDE+G PYD V R+ NF
Sbjct: 624 FKWCDVTRSVKQLSEISTTLRQKRFRNGALQLENSKPVFLFDEHGVPYDFVTCSRKGSNF 683
Query: 489 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 548
L EEFMLLAN TAAEVI++A+ S+LLRRHP PN RKL+EFE FCSKHG+ LD SSSGQ
Sbjct: 684 LVEEFMLLANMTAAEVISQAYRASSLLRRHPEPNTRKLKEFEGFCSKHGMDLDISSSGQL 743
Query: 549 HQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD-TDWGHYALAFPVYTHF 607
SLE+ LKDD V DIL NYA +PMQLASYFC+G+ KD +WGHYALA P+YTHF
Sbjct: 744 QDSLEKITGNLKDDSVFVDILNNYAIKPMQLASYFCTGNLKDSVAEWGHYALAVPLYTHF 803
Query: 608 TSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESL 667
TSPLRRYPD+VVHR L AALEAE+LY K + + EG R F TGI ++KDAAES+
Sbjct: 804 TSPLRRYPDIVVHRALAAALEAEELYSKQK----QTAIDEG-RSCF-TGIHFNKDAAESI 857
Query: 668 EGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSE 727
EG+EALSVAALK+GVP +IL +VA +CN+RKLA R V+DAC KLY W +LK+KE+ E
Sbjct: 858 EGKEALSVAALKHGVPSTEILSDVAAYCNERKLAARKVRDACDKLYTWFVLKQKEIFPCE 917
Query: 728 ARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVLSLCAHKRSFKRGGPG 787
ARV+ LG RFMT+YI KL IERRIYYD++EGL +WLE TSTL++ K KRGG G
Sbjct: 918 ARVMNLGSRFMTVYISKLGIERRIYYDQIEGLCADWLEATSTLIVD----KLYSKRGGRG 973
Query: 788 NYRALEEVALVVRPNDLKEEHGMFGGSVNKCFTTDANAKRQCSGSSSNSGVDPGVFPLTI 847
++ ++E +V P ++ V KC + S + V P VFPLTI
Sbjct: 974 FFKPMKEAVYLVSPCEV---------CVAKCSALSVHDTESPEAVSIDE-VAPAVFPLTI 1023
Query: 848 PLLSTIPVALNAIGGGDGPLEIGVRLYMSSY 878
L STIPV L+A+GG DGPL+IG RLYMSSY
Sbjct: 1024 QLFSTIPVVLHAVGGDDGPLDIGARLYMSSY 1054
>gi|357488939|ref|XP_003614757.1| DIS3-like exonuclease [Medicago truncatula]
gi|355516092|gb|AES97715.1| DIS3-like exonuclease [Medicago truncatula]
Length = 1051
Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/903 (52%), Positives = 611/903 (67%), Gaps = 93/903 (10%)
Query: 1 MKG---FSNNSSIVEDSNLPTEANGMHSDICKGKSKVDVSYEYSNCT------------- 44
MKG +NN++++E NL E N + C+G KVD +EYS
Sbjct: 217 MKGPNVANNNTAVLEGCNLLVEDNIAGDNNCEGIEKVDADHEYSGQNKEESFDNSSPYRS 276
Query: 45 --LLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIE 102
++ I+ ++ + + +I G + +G + + S + S S Q++ MNA+E
Sbjct: 277 YPFPEKRYIYENNTTQGSPNHLSLIGLTGRDNNDGPNCDSPASIKINSGSGQSEVMNAVE 336
Query: 103 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSV 162
++ +++S+P+KRPTGRVV++IERSPRR+ IVG LNV QW + ++KD +KN++S+S
Sbjct: 337 KICLLVNSFPSKRPTGRVVAVIERSPRRECIVGHLNVKQWVFSQEINKKDPRKNKNSVS- 395
Query: 163 PDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQ 222
+ EYIQLTP PK+P +++LV+DLP SIK RL+ GDA IE +LVAA+I +W EESPFP+
Sbjct: 396 -EHEYIQLTPIDPKFPNIMLLVRDLPKSIKIRLKNGDAAIEKDLVAAQIVDWFEESPFPE 454
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNF 282
+L FGRG E++ + E IC
Sbjct: 455 GDILQHFGRGSEIQNCKVELTLE--ICA-------------------------------- 480
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
F IDPSTATDLDDALSIE+L +G RVG+HIADVSYFVLP TALD+EAQ RSTSVY+L
Sbjct: 481 -FFLIDPSTATDLDDALSIEKLPNGNYRVGIHIADVSYFVLPDTALDVEAQFRSTSVYLL 539
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
Q+K+PML L+SE +GSLNPGVDRLAFS+ DLN AGDVVDRWIGRTVI+SCCKLSYEHA
Sbjct: 540 QKKLPMLSALISENIGSLNPGVDRLAFSMLLDLNVAGDVVDRWIGRTVIQSCCKLSYEHA 599
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
QDIIDG F+ ESS+ +G+P+L+G+F W DV+ S+KSLYE+S +LK KRF GALRL+
Sbjct: 600 QDIIDGAFNFESSSFHEDGYPKLHGRFGWPDVITSLKSLYEISNVLKHKRFAGGALRLDK 659
Query: 463 SKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
K V L DE G PY+S S +++ N L EE+MLLAN TAAE+I RA+PD ALLRRHP PN
Sbjct: 660 PKIVILSDENGIPYNSTFSEQKESNLLIEEYMLLANTTAAEIICRAYPDVALLRRHPEPN 719
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
MRKLREF AFC KHGL LDTSSSG SLEQ +EKLKDD VL+DILI+YA++ MQ ASY
Sbjct: 720 MRKLREFTAFCQKHGLNLDTSSSGHIRSSLEQMKEKLKDDPVLYDILISYASKLMQSASY 779
Query: 583 FCSGDFKDDT-DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLP 641
FCS D KD+ +WGHYALA P+YTHFTSPLRRY D+VVHRTL A +EAE++Y K
Sbjct: 780 FCSSDLKDNEHEWGHYALAVPLYTHFTSPLRRYADIVVHRTLLATIEAEEIYLK------ 833
Query: 642 KNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLA 701
+ + GV R T ALK+ VP A+IL ++A HCNDRKLA
Sbjct: 834 QVGKKMGVEKRCFT---------------------ALKHRVPSAEILADIAAHCNDRKLA 872
Query: 702 CRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+ VKD+C +LYMW LLK+++V+LSEARVL LGP+FM+IYI+KLA+E+RIYYDEVEGL
Sbjct: 873 SKYVKDSCERLYMWFLLKQQKVILSEARVLGLGPKFMSIYIQKLAVEKRIYYDEVEGLTA 932
Query: 762 EWLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPNDLKEEHGMFGGSVNKCFTT 821
EWL+ TSTLVLS+ +KR+ +R GN+RAL E ++ P DLK M + N
Sbjct: 933 EWLDATSTLVLSMSPNKRANRR---GNWRALSESVMLACPYDLKVT--MDNSNQNDAIEV 987
Query: 822 DA-----NAKRQCSGSSSNSGVDPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGVRLYMS 876
DA + + +S + ++P FPLT+ LLSTIPVAL+A+GG DGPL+ GVRLYM+
Sbjct: 988 DAAVSDTDKHHDSTSETSETEIEPSFFPLTVHLLSTIPVALHAVGGDDGPLDFGVRLYMT 1047
Query: 877 SYM 879
SY
Sbjct: 1048 SYF 1050
>gi|222623692|gb|EEE57824.1| hypothetical protein OsJ_08422 [Oryza sativa Japonica Group]
Length = 936
Score = 852 bits (2200), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/826 (54%), Positives = 574/826 (69%), Gaps = 40/826 (4%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
NG+H ++ K +++ A+ R+ +M+ S P++RPTG+V++II++SPRRD +VG
Sbjct: 130 NGNHDGKKENCGKDLGEGKSEASRALHRICSMVYSNPSRRPTGKVLAIIKKSPRRDTVVG 189
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREY---------IQLTPTHPKYPKMVVLVKD 186
FL + + +KN+ S+ + I L PT K+P MVV V
Sbjct: 190 FLA-----PFAVCPDPEQQKNQMSMLSKRMNHRASSYFSGLILLLPTDSKFPHMVVNVST 244
Query: 187 LPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYEN 246
LPDS++ LEEGDA ELVAARI +WNEES +P AHV+ + G+GG+V+ ++AIL+EN
Sbjct: 245 LPDSVRNHLEEGDAA--KELVAARISDWNEESLYPCAHVIQLLGKGGQVKTHMDAILFEN 302
Query: 247 AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 306
AI + FSPES+ CLP + W++PQEEL RKDLRN FTIDP TATDLDDA+SIE LS
Sbjct: 303 AISDAEFSPESMECLPDICWKIPQEELEVRKDLRNVLTFTIDPPTATDLDDAISIEMLSG 362
Query: 307 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 366
GI R+GVHIADVSYFV P TALD EAQ+RSTSVY L+RKI MLP+ LSE++ SLNPGVDR
Sbjct: 363 GIVRIGVHIADVSYFVHPETALDAEAQIRSTSVYTLRRKISMLPLRLSEDLVSLNPGVDR 422
Query: 367 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII--DG-KFDVESSNTLGEGWP 423
L FSI WD++ G++++RWIGRTVI SCCKLSY+ QD+I DG KF +S+++L
Sbjct: 423 LTFSIIWDIDPHGNIINRWIGRTVISSCCKLSYDLVQDLICSDGTKF--KSASSL----- 475
Query: 424 QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGR 483
Q++G FE DV++S++ LYE+SK LK+ RF GAL LE +K + FDE G P DS R
Sbjct: 476 QVHGIFEQDDVIKSLRCLYEISKNLKEIRFKGGALSLETAKLMIQFDEGGAPCDSFRYER 535
Query: 484 EDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTS 543
D F+ EE MLLAN +AAEVI+ AFP+ ALLRRHP PN+RK REFEAFC+++G +LD S
Sbjct: 536 NDACFIVEELMLLANMSAAEVISNAFPNCALLRRHPEPNLRKSREFEAFCARNGFELDGS 595
Query: 544 SSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF--KDDTDWGHYALAF 601
SSGQ H SL + +EKLKDD VLFDIL+ YA++ MQ A YFC+ D K D DW HYAL+
Sbjct: 596 SSGQLHLSLSRMKEKLKDDPVLFDILMFYASKQMQSAEYFCTADLISKRD-DWAHYALSV 654
Query: 602 PVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNN-----HREGVRGRFLTG 656
P+YTHFTSPLRRYPD++VHRTLNA +EAEK+Y KHRR L N E + G F TG
Sbjct: 655 PLYTHFTSPLRRYPDIIVHRTLNAVIEAEKMYLKHRRSLTGQNGFNTASCEMMHGCF-TG 713
Query: 657 IFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWI 716
+ + KDAAES EG EALS AA K+ VP D L VA HCN+RK A R +DA KLYMW
Sbjct: 714 LQFSKDAAESKEGSEALSAAAKKFKVPSPDNLGEVAEHCNERKWASRRAEDAGQKLYMWA 773
Query: 717 LLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVLSLCA 776
L+K+KEVL++ ARVL LGP+FM++Y+ KLA+ERRI+YDEVEGL +EWLE T TLVL C
Sbjct: 774 LIKRKEVLVANARVLGLGPKFMSVYVPKLAMERRIHYDEVEGLSIEWLEATGTLVLDSCR 833
Query: 777 HKRSFKRGGPGNYRALEEVALVVRPND--LKEEHGMFGGSVNKCFTTDANAKRQCSGSSS 834
++ +RG YRA EEVA++V P++ EE G + C D S +
Sbjct: 834 NRPPQRRGNQVKYRAFEEVAMMVNPSESIFSEEDEESGATEAGC---DTAKSVLLSDEAV 890
Query: 835 NSGVDPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGVRLYMSSYMR 880
+ V P V PL I LS IPV L+AIGG D L+IGVRLYMSSY +
Sbjct: 891 KAQVAPAVLPLVIQYLSEIPVVLHAIGGEDSALDIGVRLYMSSYFK 936
>gi|115448745|ref|NP_001048152.1| Os02g0754100 [Oryza sativa Japonica Group]
gi|46805940|dbj|BAD17234.1| putative Ribosomal RNA processing protein [Oryza sativa Japonica
Group]
gi|113537683|dbj|BAF10066.1| Os02g0754100 [Oryza sativa Japonica Group]
Length = 1067
Score = 851 bits (2198), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/909 (51%), Positives = 603/909 (66%), Gaps = 62/909 (6%)
Query: 1 MKG--FSNNSSIVEDSNLPT--EANGMHSDICKGKSKVDVSYEYSNCT----LLSEKGIH 52
MKG + N +I E S + E NG H K + D + + NC+ +
Sbjct: 192 MKGPNITCNPAIGEGSAVREVGETNGNHDG---KKGQTDANCRFGNCSNGQPVSDRTHYR 248
Query: 53 HDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYP 112
H + S+A E NGH + ++ K +++ A+ R+ +M+ S P
Sbjct: 249 HKNSGFSKAVTCE----------NGH-ATVPENCGKDLGEGKSEASRALHRICSMVYSNP 297
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREY----- 167
++RPTG+V++II++SPRRD +VGFL + + +KN+ S+ +
Sbjct: 298 SRRPTGKVLAIIKKSPRRDTVVGFLA-----PFAVCPDPEQQKNQMSMLSKRMNHRASSY 352
Query: 168 ----IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 223
I L PT K+P MVV V LPDS++ LEEGDA ELVAARI +WNEES +P A
Sbjct: 353 FSGLILLLPTDSKFPHMVVNVSTLPDSVRNHLEEGDAA--KELVAARISDWNEESLYPCA 410
Query: 224 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFC 283
HV+ + G+GG+V+ ++AIL+ENAI + FSPES+ CLP + W++PQEEL RKDLRN
Sbjct: 411 HVIQLLGKGGQVKTHMDAILFENAISDAEFSPESMECLPDICWKIPQEELEVRKDLRNVL 470
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
FTIDP TATDLDDA+SIE LS GI R+GVHIADVSYFV P TALD EAQ+RSTSVY L+
Sbjct: 471 TFTIDPPTATDLDDAISIEMLSGGIVRIGVHIADVSYFVHPETALDAEAQIRSTSVYTLR 530
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
RKI MLP+ LSE++ SLNPGVDRL FSI WD++ G++++RWIGRTVI SCCKLSY+ Q
Sbjct: 531 RKISMLPLRLSEDLVSLNPGVDRLTFSIIWDIDPHGNIINRWIGRTVISSCCKLSYDLVQ 590
Query: 404 DII--DG-KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 460
D+I DG KF +S+++L Q++G FE DV++S++ LYE+SK LK+ RF GAL L
Sbjct: 591 DLICSDGTKF--KSASSL-----QVHGIFEQDDVIKSLRCLYEISKNLKEIRFKGGALSL 643
Query: 461 ENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
E +K + FDE G P DS R D F+ EE MLLAN +AAEVI+ AFP+ ALLRRHP
Sbjct: 644 ETAKLMIQFDEGGAPCDSFRYERNDACFIVEELMLLANMSAAEVISNAFPNCALLRRHPE 703
Query: 521 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLA 580
PN+RK REFEAFC+++G +LD SSSGQ H SL + +EKLKDD VLFDIL+ YA++ MQ A
Sbjct: 704 PNLRKSREFEAFCARNGFELDGSSSGQLHLSLSRMKEKLKDDPVLFDILMFYASKQMQSA 763
Query: 581 SYFCSGDF--KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRR 638
YFC+ D K D DW HYAL+ P+YTHFTSPLRRYPD++VHRTLNA +EAEK+Y KHRR
Sbjct: 764 EYFCTADLISKRD-DWAHYALSVPLYTHFTSPLRRYPDIIVHRTLNAVIEAEKMYLKHRR 822
Query: 639 MLPKNN-----HREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVAT 693
L N E + G F TG+ + KDAAES EG EALS AA K+ VP D L VA
Sbjct: 823 SLTGQNGFNTASCEMMHGCF-TGLQFSKDAAESKEGSEALSAAAKKFKVPSPDNLGEVAE 881
Query: 694 HCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYY 753
HCN+RK A R +DA KLYMW L+K+KEVL++ ARVL LGP+FM++Y+ KLA+ERRI+Y
Sbjct: 882 HCNERKWASRRAEDAGQKLYMWALIKRKEVLVANARVLGLGPKFMSVYVPKLAMERRIHY 941
Query: 754 DEVEGLIVEWLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPND--LKEEHGMF 811
DEVEGL +EWLE T TLVL C ++ +RG YRA EEVA++V P++ EE
Sbjct: 942 DEVEGLSIEWLEATGTLVLDSCRNRPPQRRGNQVKYRAFEEVAMMVNPSESIFSEEDEES 1001
Query: 812 GGSVNKCFTTDANAKRQCSGSSSNSGVDPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGV 871
G + C D S + + V P V PL I LS IPV L+AIGG D L+IGV
Sbjct: 1002 GATEAGC---DTAKSVLLSDEAVKAQVAPAVLPLVIQYLSEIPVVLHAIGGEDSALDIGV 1058
Query: 872 RLYMSSYMR 880
RLYMSSY +
Sbjct: 1059 RLYMSSYFK 1067
>gi|326525341|dbj|BAK07940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1056
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/887 (51%), Positives = 603/887 (67%), Gaps = 58/887 (6%)
Query: 18 TEANGMHSDICKGKSKVDVSYEY-SNCTLLSEKGIHHDDDSSSEAYNQEMIEREGYNYIN 76
+E NG HS + KG++ E SN + ++ +H +S ++Q +I G
Sbjct: 204 SETNGNHS-LKKGQADASCRVEKCSNGQPVPDRMHNHHKNS---GFSQAVICENG----- 254
Query: 77 GHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGF 136
H + ++ E + ++ + A++R+ ++I ++P++RPTG+VVS+I++SPRR +VGF
Sbjct: 255 --HATVPENYEDLDEAK-TEFARALQRICSVIYNHPSRRPTGKVVSVIKKSPRRSTVVGF 311
Query: 137 LNVNQWFNYKGGSRKD------AKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDS 190
L + ++ G +K+ +K+ S +Q+ PT PK+P+M+V L D
Sbjct: 312 LA--PFSDFLDGEQKNQMNVQGSKRMNHIASSIFTGLVQILPTDPKFPQMIVSTSTLSDG 369
Query: 191 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 250
IK+RL+EGD TI ELVAA+IDEWNEESP+P A V+ G+GG VE ++AIL+ENAI
Sbjct: 370 IKQRLKEGDITIWKELVAAQIDEWNEESPYPWACVVQFLGKGGLVETHMDAILFENAISD 429
Query: 251 SGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISR 310
+ FSP S++CLP W++PQEEL +RKDLRN TIDP TA+DLDDA+SIE LS GI R
Sbjct: 430 AEFSPLSMACLPDTCWKIPQEELAARKDLRNVLTLTIDPPTASDLDDAISIETLSGGIVR 489
Query: 311 VGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFS 370
+GVHIADVSYFV PGTALD EAQ+RSTSVY L+ K+ MLP LSEE+ SLNPGVDRLAFS
Sbjct: 490 IGVHIADVSYFVHPGTALDAEAQIRSTSVYTLRHKVSMLPSRLSEELVSLNPGVDRLAFS 549
Query: 371 IFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII--DGKFDVESSNTLGEGWPQLYGQ 428
+ WD++ G +V+RWIG T+I SCCKLSY+ QD+I D ++ +L Q++G+
Sbjct: 550 VIWDIDPHGSIVNRWIGHTIIFSCCKLSYDLVQDLISSDASQFRSAATSL-----QVHGR 604
Query: 429 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNF 488
F+ D+++S++ LYE+SK LKD RF GAL L+ SKP LFDE G P DS R D F
Sbjct: 605 FKHEDIIKSLRCLYEISKNLKDIRFKGGALSLDTSKPTILFDEDGAPCDSYRYKRNDACF 664
Query: 489 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 548
+ EE MLLAN +AAEVI+ AFPD ALLRRHP PN RKL+EFEAFC+K+G +LD+SSSGQ
Sbjct: 665 IVEELMLLANMSAAEVISNAFPDCALLRRHPEPNPRKLKEFEAFCAKNGFELDSSSSGQL 724
Query: 549 HQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF--KDDTDWGHYALAFPVYTH 606
H S+ + +E L+DD V+FDIL+ YA++ MQ A YFC+GD K D DW HYAL+ P+YTH
Sbjct: 725 HLSICRMKEDLQDDPVMFDILMFYASKQMQSAEYFCTGDLISKKD-DWAHYALSIPLYTH 783
Query: 607 FTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRG-------RFLTGIFY 659
FTSPLRRYPD++VHR LNA LEAE++Y K RR+ + R GV+ R TG+ +
Sbjct: 784 FTSPLRRYPDIIVHRILNAVLEAEQMYLKQRRI---STGRNGVKATSSEIVSRCFTGLQF 840
Query: 660 DKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLK 719
KDAAES EGREALS AA K+ +P ++ L + A HCN+RK A R ++A KLYMW LLK
Sbjct: 841 SKDAAESKEGREALSAAAKKFKIPNSEALGDAAEHCNERKWASRRAEEAGQKLYMWALLK 900
Query: 720 KKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVLSLCAHKR 779
+ E L+S ARVL LGPRFM++Y+ KL++ERRIYYDEVEGL EWLE T TLVL C +K
Sbjct: 901 RNETLVSNARVLGLGPRFMSVYVPKLSMERRIYYDEVEGLSTEWLEATGTLVLDACRNKP 960
Query: 780 SFKRGGPGN-YRALEEVALVVRPNDL-----KEEHGMFGGSVNKCFTTDANAKRQCSGSS 833
KRGG RA+EEVA+VV P++L K+E G +V+ +D K +
Sbjct: 961 Q-KRGGQFRCSRAIEEVAVVVNPSELMLPEDKDESGAI-EAVDSVLLSDEAVKVE----- 1013
Query: 834 SNSGVDPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGVRLYMSSYMR 880
V P V P+ I LS IPV L+AIGG D P++IGVRLYMSSY +
Sbjct: 1014 ----VAPAVLPMVISYLSDIPVVLHAIGGVDSPVDIGVRLYMSSYFK 1056
>gi|357143834|ref|XP_003573072.1| PREDICTED: DIS3-like exonuclease 2-like [Brachypodium distachyon]
Length = 1080
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/895 (50%), Positives = 598/895 (66%), Gaps = 68/895 (7%)
Query: 18 TEANGMHSDICKGKSKVDVSYEYSNCT----LLSEKGIHHDDDSSSEAYNQEMIEREGYN 73
+E NG HS + + D S + NC+ + HH + S+A E
Sbjct: 222 SETNGNHS---SKRGQADTSCRFENCSNGLSVSDRMHNHHKNSGFSQAVKCE-------- 270
Query: 74 YINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGI 133
NGH +S E ++ + + A++R+ ++I S+P++RPTG+VVS+I+ S RR +
Sbjct: 271 --NGH-AIVPESYEDLNEGKTEAAI-ALQRICSVIYSHPSRRPTGKVVSVIKMSSRRGAV 326
Query: 134 VGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE------------YIQLTPTHPKYPKMV 181
VGFL F D + +R+ ++V + + L PT PK+P M+
Sbjct: 327 VGFLAPLSEF-------PDGEPHRNQMNVQGSKRMNHIASSFVTGLVHLLPTDPKFPLMI 379
Query: 182 VLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINA 241
V V LPDSI++ L+EG+ IE E+VAA IDEWNEESPFP A V+ G+GG+VE ++A
Sbjct: 380 VSVSTLPDSIRQSLKEGNIAIEKEIVAACIDEWNEESPFPWARVVKFLGKGGQVESHMDA 439
Query: 242 ILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSI 301
IL+EN+I + FSPES++CLP V W++PQEEL +RKDLRN FTIDP TA+DLDDA+SI
Sbjct: 440 ILFENSISDAEFSPESMACLPDVCWKIPQEELEARKDLRNVLTFTIDPPTASDLDDAISI 499
Query: 302 ERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLN 361
E L +GI RVGVHIADVSYFV P TALD EAQ+RSTSVY L+RK+ MLP LS E+ SLN
Sbjct: 500 EILPEGIVRVGVHIADVSYFVHPETALDAEAQIRSTSVYTLRRKVSMLPSRLSAELVSLN 559
Query: 362 PGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEG 421
PG D+LAFS+ WD++ G +V+RWIGRT+I SCCKLSY+ QD+I DV ++
Sbjct: 560 PGADKLAFSVIWDIDPHGSIVNRWIGRTIIFSCCKLSYDLVQDLISS--DVSQFGSVAAS 617
Query: 422 WPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLS 481
Q++G FE D+++S++ LYE++K LK+ RF GAL L+ +KP+ LFDE G P DS
Sbjct: 618 L-QVHGMFEQGDIIKSLRCLYEITKNLKEIRFKGGALSLDTAKPMILFDEDGAPCDSYRY 676
Query: 482 GREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD 541
R D F+ EE MLLAN +AAEVI+ AFPD ALLRRHP PN RKL+EFEAFC+++G +LD
Sbjct: 677 KRNDACFIVEELMLLANMSAAEVISNAFPDCALLRRHPEPNPRKLKEFEAFCARNGFELD 736
Query: 542 TSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF--KDDTDWGHYAL 599
+SSSGQ H S+ + +EKL++D V+FDIL+ YA++ MQ A YFC+GD K+D DW HYAL
Sbjct: 737 SSSSGQLHLSISRMKEKLQNDPVMFDILMFYASKQMQSAEYFCTGDLISKND-DWAHYAL 795
Query: 600 AFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRG-------R 652
+ P+YTHFTSPLRRYPD++VHRTLNA +EAE++Y K +++ + R GV+ R
Sbjct: 796 SVPLYTHFTSPLRRYPDIIVHRTLNAVIEAEQMYLKQKKV---STVRNGVKAKSCEMMDR 852
Query: 653 FLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKL 712
TG+ + KDAAES EGREALS AA K+ P +D L A HCN+RK A R ++A KL
Sbjct: 853 CFTGLQFSKDAAESKEGREALSAAAKKFKFPSSDDLGEAAEHCNERKWASRRAEEAGQKL 912
Query: 713 YMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVL 772
YMW LLK+ E+ +S ARVL LGPRFM++Y+ KL++ERRIYYDEVEGL +EWLE T TLV+
Sbjct: 913 YMWALLKRNEIKVSNARVLGLGPRFMSVYVPKLSMERRIYYDEVEGLSIEWLEATGTLVV 972
Query: 773 SLCAHKRSFKRGGPGN-YRALEEVALVVRPNDL-----KEEHGMFGGSVNKCFTTDANAK 826
C +K + +RG RA+EEVA+VV P++L K+E G G T D A
Sbjct: 973 DACRNKPAQRRGSQFKCSRAIEEVAVVVNPSELMLSEDKDESGATG-------TGDPTAD 1025
Query: 827 RQ-CSGSSSNSGVDPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGVRLYMSSYMR 880
S + + V P V PL I LS IPV L+AIGG D ++IGVRLY+SSY +
Sbjct: 1026 SVLLSDDAVEAQVAPAVLPLVIRYLSDIPVVLHAIGGEDCQVDIGVRLYISSYFK 1080
>gi|12323300|gb|AAG51632.1|AC012193_14 putative 3'-5' exoribonuclease, 3' partial; 3320-1 [Arabidopsis
thaliana]
Length = 935
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/678 (62%), Positives = 511/678 (75%), Gaps = 17/678 (2%)
Query: 71 GYNYINGHHPSTSDSTEKVSSS--QQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSP 128
G NG PS+ S + S +Q +A+++L ++SS+P KRPTG+VV+++E+S
Sbjct: 272 GKGAKNGVTPSSPPSLDSCLGSFCEQKGNCSAVDKLCGILSSFPHKRPTGQVVAVVEKSL 331
Query: 129 RRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLP 188
RD IVG L+V W +YK D K+ +S LS+ D EY+QL P P++PK++V LP
Sbjct: 332 VRDSIVGLLDVKGWIHYK---ESDPKRCKSPLSLSDDEYVQLMPADPRFPKLIVPFHVLP 388
Query: 189 DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAI 248
SI+ RLE D +E ELVAA+I +W E SPFP A + H+FGRG E+EPQINAILY+N++
Sbjct: 389 GSIRARLENLDPNLEAELVAAQIVDWGEGSPFPVAQITHLFGRGSELEPQINAILYQNSV 448
Query: 249 CCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGI 308
C S FSP SL+ LP VPWEVP+EE+ RKDLR+ C+ TIDPSTATDLDDALS++ L G
Sbjct: 449 CDSDFSPGSLTSLPRVPWEVPEEEVQRRKDLRDLCVLTIDPSTATDLDDALSVQSLPGGF 508
Query: 309 SRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 368
RVGVHIADVSYFVLP TALD EA+ RSTSVY++QRKI MLP LLSE VGSL+PG DRLA
Sbjct: 509 FRVGVHIADVSYFVLPETALDTEARFRSTSVYLMQRKISMLPPLLSENVGSLSPGADRLA 568
Query: 369 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 428
FSI WDLN GDV+DRWIGRT+IRSCCKLSY+HAQDIIDGK DV + GWP L+G
Sbjct: 569 FSILWDLNREGDVIDRWIGRTIIRSCCKLSYDHAQDIIDGKSDVAEN-----GWPALHGS 623
Query: 429 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNF 488
F+W DV RS+K L E+S L+ KRF +GAL+LENSKPVFLFDE+G PYD V R+ NF
Sbjct: 624 FKWCDVTRSVKQLSEISTTLRQKRFRNGALQLENSKPVFLFDEHGVPYDFVTCSRKGSNF 683
Query: 489 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 548
L EEFMLLAN TAAEVI++A+ S+LLRRHP PN RKL+EFE FCSKHG+ LD SSSGQ
Sbjct: 684 LVEEFMLLANMTAAEVISQAYRASSLLRRHPEPNTRKLKEFEGFCSKHGMDLDISSSGQL 743
Query: 549 HQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD-TDWGHYALAFPVYTHF 607
SLE+ LKDD V DIL NYA +PMQLASYFC+G+ KD +WGHYALA P+YTHF
Sbjct: 744 QDSLEKITGNLKDDSVFVDILNNYAIKPMQLASYFCTGNLKDSVAEWGHYALAVPLYTHF 803
Query: 608 TSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESL 667
TSPLRRYPD+VVHR L AALEAE+LY K ++ EG R F TGI ++KDAAES+
Sbjct: 804 TSPLRRYPDIVVHRALAAALEAEELYSKQKQTAID----EG-RSCF-TGIHFNKDAAESI 857
Query: 668 EGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSE 727
EG+EALSVAALK+GVP +IL +VA +CN+RKLA R V+DAC KLY W +LK+KE+ E
Sbjct: 858 EGKEALSVAALKHGVPSTEILSDVAAYCNERKLAARKVRDACDKLYTWFVLKQKEIFPCE 917
Query: 728 ARVLALGPRFMTIYIEKL 745
ARV+ LG RFMT+YI KL
Sbjct: 918 ARVMNLGSRFMTVYISKL 935
>gi|242062494|ref|XP_002452536.1| hypothetical protein SORBIDRAFT_04g027560 [Sorghum bicolor]
gi|241932367|gb|EES05512.1| hypothetical protein SORBIDRAFT_04g027560 [Sorghum bicolor]
Length = 1068
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/897 (50%), Positives = 590/897 (65%), Gaps = 44/897 (4%)
Query: 1 MKG--FSNNSSIVEDSNLP--TEANGMHSDICKGKSKVDVSYEYSNCT----LLSEKGIH 52
MKG + N +I DS + +E NG HS K DV + NC+ +L
Sbjct: 196 MKGPNVACNPAIGGDSVVREFSETNGNHS---WKKGHADVGCRFENCSNAVPVLDRMHPP 252
Query: 53 HDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYP 112
H + S+A N + + + K + +++ A++R+ AMI S+P
Sbjct: 253 HKNSGFSQAVN-----------CGNGNATVPERNVKDLNDGKSEAARALQRICAMICSHP 301
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFL-NVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLT 171
++RPTG+V+S+ ++SPRRD IVGFL + +++ + + + K ++++ L
Sbjct: 302 SRRPTGKVLSVTKKSPRRDAIVGFLASFSEFPDGEQQKNQMGLKRMNNVASSVTGLFHLL 361
Query: 172 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
PT PK+P MVV LPDS+ + L GDA E ELVAARIDEWNEE+ +P AHV+ G+
Sbjct: 362 PTDPKFPPMVVSFSTLPDSVIQSLR-GDAAFEKELVAARIDEWNEENIYPYAHVIRFLGK 420
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 291
GG V+ ++AIL+ENAI + FSPESL+CLP W++PQ+EL +RKDLR FTIDP T
Sbjct: 421 GGHVKTHMDAILFENAISDAEFSPESLACLPDNCWKIPQKELEARKDLREVLSFTIDPPT 480
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
A+DLDDA+SI+ LS G RVGVHIADVSYFV P TALD EAQ RSTSVY L+RKI MLP
Sbjct: 481 ASDLDDAISIQILSGGTVRVGVHIADVSYFVHPETALDAEAQSRSTSVYTLKRKISMLPS 540
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
LSE V SLNPG DRLAFSI WD++ G+++ RWIGR+VI SCCKLSYE QD+I +
Sbjct: 541 RLSEVV-SLNPGTDRLAFSIIWDIDPHGNIISRWIGRSVIFSCCKLSYELVQDLICNEAS 599
Query: 412 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDE 471
S +++G+FE DV++S++ LYEV+K LK+ RF GAL L+ +K + LFDE
Sbjct: 600 QARSAISSF---EVHGKFERDDVIKSLRGLYEVTKNLKEVRFKGGALSLDTAKLMILFDE 656
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
G P DS R + F+ EE MLLAN +AAE+I+ AFPD ALLRRHP PN+R+ REFEA
Sbjct: 657 DGAPCDSYRYVRNNACFIVEELMLLANMSAAEIISNAFPDCALLRRHPEPNLRRFREFEA 716
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF--K 589
FC+K+G +LD SSSGQ H SL + +EKL++D V+FDIL+ YA++ MQ A YFC+GD K
Sbjct: 717 FCAKNGFELDASSSGQLHLSLSRIKEKLQEDPVMFDILMFYASKQMQSAEYFCTGDLISK 776
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
D DW HYAL+ P+YTHFTSPLRRYPD++VHRTLNA +EAE++Y K ++ + R GV
Sbjct: 777 KD-DWAHYALSVPLYTHFTSPLRRYPDIIVHRTLNAVIEAEQVYIKQKKF---STGRNGV 832
Query: 650 RG------RFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACR 703
+ R TG+ KDA ES EG++ LS AA K+ VP ++ L +A HCN+RK A R
Sbjct: 833 KASCELMDRCFTGLQLCKDATESEEGKKVLSAAAKKFKVPYSENLGEIAEHCNERKWAGR 892
Query: 704 NVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEW 763
+DA KLYMW L+K KEV++ ARVL LGPRFM++Y+ KLA+ERRIYYDEVEGL VEW
Sbjct: 893 RAEDAGQKLYMWALIKNKEVVVCNARVLGLGPRFMSVYVPKLAMERRIYYDEVEGLSVEW 952
Query: 764 LETTSTLVLSLCAHKRSFKRGG-PGNYRALEEVALVVRPNDLKEEHGMFGGSVNKCFTTD 822
LE T TLVL C +K + +RG R +EEVA+VV P++L EE G + T
Sbjct: 953 LEATGTLVLDACWNKPAQRRGTYQMKCRPIEEVAMVVNPSELSEEDEESGAAEASGCTAK 1012
Query: 823 ANAKRQCSGSSSNSGVDPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGVRLYMSSYM 879
+ SG + + P V PL I LS IPV L+AIGG D ++IGVRLYM+SY
Sbjct: 1013 SVL---LSGDAVKTQTAPAVLPLVIHYLSDIPVVLHAIGGEDCAVDIGVRLYMASYF 1066
>gi|218191600|gb|EEC74027.1| hypothetical protein OsI_08979 [Oryza sativa Indica Group]
Length = 1010
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/909 (49%), Positives = 576/909 (63%), Gaps = 101/909 (11%)
Query: 1 MKG--FSNNSSIVEDSNLPT--EANGMHSDICKGKSKVDVSYEYSNCT----LLSEKGIH 52
MKG + N +I E S + E NG H K + D + + NC+ +
Sbjct: 174 MKGPNITCNPAIGEGSAVREVGETNGNHDG---KKGQTDANCRFGNCSNGQPVSDRTHYR 230
Query: 53 HDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYP 112
H + S+A E NGH + ++ K S +++ A+ R+ +M+ S P
Sbjct: 231 HKNSGFSKAVTCE----------NGH-ATVPENCGKDSGEGKSEASRALHRICSMVYSNP 279
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREY----- 167
++RPTG+V++II++SPRRD +VGFL + + +KN+ S+ +
Sbjct: 280 SRRPTGKVLAIIKKSPRRDTVVGFLA-----PFAVCPDPEQQKNQMSMLSKRMNHRASSY 334
Query: 168 ----IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 223
I L PT K+P MVV V LPDS++ LEEGDA ELVAARI +WNEES +P A
Sbjct: 335 FSGLILLLPTDSKFPHMVVNVSTLPDSVRNHLEEGDAA--KELVAARISDWNEESLYPCA 392
Query: 224 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFC 283
HV+ + G+GG+V+ ++AIL+ENAI + FSPES+ CLP + W++PQEEL RKDLRN
Sbjct: 393 HVIQLLGKGGQVKTHMDAILFENAISDAEFSPESMECLPDICWKIPQEELEVRKDLRNVL 452
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
FTIDP TATDLDDA+SIE LS GI R+GVHIADVSYFV P TALD EAQ+RSTSVY L+
Sbjct: 453 TFTIDPPTATDLDDAISIEMLSGGIVRIGVHIADVSYFVHPETALDAEAQIRSTSVYTLR 512
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
RKI MLP LSE++ SLNPGVDRL FSI WD++ G++++RWIGRTVI SCCKLSY+ Q
Sbjct: 513 RKISMLPSRLSEDLVSLNPGVDRLTFSIIWDIDPHGNIINRWIGRTVISSCCKLSYDLVQ 572
Query: 404 DII--DG-KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 460
D+I DG KF +S+++L Q++G FE DV++S++ LYE+SK LK+ RF GAL L
Sbjct: 573 DLICSDGTKF--KSASSL-----QVHGIFEQDDVIKSLRCLYEISKNLKEIRFKGGALSL 625
Query: 461 ENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
E +K + FDE G P D RHP
Sbjct: 626 ETAKLMIQFDEGGAPCD---------------------------------------RHPE 646
Query: 521 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLA 580
PN+RK REFEAFC+++G +LD SSSGQ H SL + +EKLKDD VLFDIL+ YA++ MQ A
Sbjct: 647 PNLRKSREFEAFCARNGFELDGSSSGQLHLSLSRMKEKLKDDTVLFDILMFYASKQMQSA 706
Query: 581 SYFCSGDF--KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRR 638
YFC+ D K D DW HYAL+ P+YTHFTSPLRRYPD++VHRTLNA +EAEK+Y KHRR
Sbjct: 707 EYFCTADLISKRD-DWAHYALSVPLYTHFTSPLRRYPDIIVHRTLNAVIEAEKMYLKHRR 765
Query: 639 MLPKNN-----HREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVAT 693
L N E + G F TG+ + KDAAES EG +ALS AA K+ VP D L VA
Sbjct: 766 SLTGQNGFNTASCEMMHGCF-TGLQFSKDAAESKEGSDALSAAAKKFKVPSPDNLGEVAE 824
Query: 694 HCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYY 753
HCN+RK A R +DA KLYMW L+K+KEVL++ ARVL LGP+FM++Y+ KLA+ERRI+Y
Sbjct: 825 HCNERKWASRRAEDAGQKLYMWALIKRKEVLVANARVLGLGPKFMSVYVPKLAMERRIHY 884
Query: 754 DEVEGLIVEWLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPND--LKEEHGMF 811
DEVEGL +EWLE T TLVL C ++ +RG YRA EEVA++V P++ EE
Sbjct: 885 DEVEGLSIEWLEATGTLVLDSCRNRPPQRRGNQVKYRAFEEVAMMVNPSESIFSEEDEES 944
Query: 812 GGSVNKCFTTDANAKRQCSGSSSNSGVDPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGV 871
G + C D S + + V P V PL I LS IPV L+AIGG D L+IGV
Sbjct: 945 GATEAGC---DTAKSVLLSDEAVKAQVAPAVLPLVIQYLSEIPVVLHAIGGEDSALDIGV 1001
Query: 872 RLYMSSYMR 880
RLYMSSY +
Sbjct: 1002 RLYMSSYFK 1010
>gi|413924505|gb|AFW64437.1| hypothetical protein ZEAMMB73_467009 [Zea mays]
Length = 1045
Score = 786 bits (2030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/803 (53%), Positives = 557/803 (69%), Gaps = 33/803 (4%)
Query: 95 NDGMN----AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSR 150
NDG + A++R+SA I S+P++RPTG+V+SII++SPRRD IVGFL F G +
Sbjct: 258 NDGKSEVARALQRISATIYSHPSRRPTGKVLSIIKKSPRRDAIVGFLASFSEFP-DGEQQ 316
Query: 151 KDA----KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMEL 206
K+ + N + SV Y L PT PK+P+MVV LPDS+++ L G+ ++ EL
Sbjct: 317 KNQMGLNRMNNRTQSVTGLFY--LLPTDPKFPQMVVSFSTLPDSVRQSLR-GNVAVKKEL 373
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
VAARIDEWNEE+ +P AHV+ G+ G V+ ++AIL+EN IC + FSPESL+CLP W
Sbjct: 374 VAARIDEWNEENLYPYAHVIRFLGKVGHVKTHMDAILFENVICDAEFSPESLACLPDNCW 433
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
++PQ+EL +RKDLR FTIDP TA+DLDDA+SIE LS G R+GVHIADVSYF+ P T
Sbjct: 434 KIPQKELEARKDLRKVLTFTIDPPTASDLDDAISIEILSGGTVRIGVHIADVSYFLHPET 493
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
ALD EAQ RSTSVY L+ KI MLP SE V SLNPGVDRLAFSI WD++ G+++ RWI
Sbjct: 494 ALDAEAQSRSTSVYTLKHKISMLPSGFSEVV-SLNPGVDRLAFSIIWDIDPHGNLISRWI 552
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGE-GWPQLYGQFEWSDVVRSIKSLYEVS 445
GR++I SCCKLSYE QD+I E+S T E +++G F DV++S++ LYEVS
Sbjct: 553 GRSIIFSCCKLSYELVQDLICN----ETSQTRPEVSSLEVHGIFGRDDVIKSLRGLYEVS 608
Query: 446 KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI 505
K LK+ RF GAL L+ +K + LFDE G P DS R++ F+ EE MLLAN +AAEVI
Sbjct: 609 KNLKEIRFKGGALSLDTAKIMILFDEDGDPCDSYRYVRKNACFIVEELMLLANMSAAEVI 668
Query: 506 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVL 565
+ AFPD ALLRRHP PN+RK REFEAFC+K+G +LD SSSGQ H SL + +EKL++D V+
Sbjct: 669 SNAFPDCALLRRHPEPNLRKSREFEAFCAKNGFELDVSSSGQLHLSLSRIKEKLQEDPVM 728
Query: 566 FDILINYATRPMQLASYFCSGDF--KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
FDI++ YA++ MQ A YFC+GD K D DW HYAL+ P+YTHFTSPLRRYPD++VHRTL
Sbjct: 729 FDIIMFYASKQMQSAEYFCTGDLISKKD-DWAHYALSVPLYTHFTSPLRRYPDIIVHRTL 787
Query: 624 NAALEAEKLYWKHRRMLPKNNHREGVRGR------FLTGIFYDKDAAESLEGREALSVAA 677
NA +EAE++Y K ++ N GV+ TG+ KDAAES EG++ALS AA
Sbjct: 788 NAVIEAEQVYMKQKKSSAGQN---GVKASCELMDMCFTGLQLCKDAAESEEGKKALSAAA 844
Query: 678 LKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRF 737
K+ VP ++ L +A HCN+RK A R ++A KLYMW L+K KE ++ ARVL LGPRF
Sbjct: 845 KKFKVPSSENLGEIAEHCNERKWAGRRAEEAGQKLYMWALIKNKETVVCNARVLGLGPRF 904
Query: 738 MTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVAL 797
M++Y+ KLA+ERRIYYDEVEGL VEWLE T TLVL C +K + +RG R +EEVA+
Sbjct: 905 MSVYVPKLAMERRIYYDEVEGLSVEWLEVTGTLVLDTCRNKPAQRRGTQMKRRPIEEVAV 964
Query: 798 VVRPNDLKEEHGMFGGSVNKCFTTDANAKRQCSGSSSNSGVDPGVFPLTIPLLSTIPVAL 857
VV P++L EE G + T + SG + + P V PL I LS IPV L
Sbjct: 965 VVNPSELSEEDEESGATEAGGCTAKSVL---LSGDAVKAQTAPAVLPLVIHYLSDIPVVL 1021
Query: 858 NAIGGGDGPLEIGVRLYMSSYMR 880
+AIGG D ++IGVRLYM+SY +
Sbjct: 1022 HAIGGEDCAVDIGVRLYMASYFK 1044
>gi|168042407|ref|XP_001773680.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675068|gb|EDQ61568.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1068
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/796 (49%), Positives = 543/796 (68%), Gaps = 40/796 (5%)
Query: 100 AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 159
AI L A +SS P KRPT +VV+I+++SPRR+ +VGFL + Q +GG + A K S
Sbjct: 294 AISSLLAQLSSCPGKRPTAKVVAIVQKSPRRESLVGFLEMPQ---QRGG--RAAGKGLSG 348
Query: 160 LSVPDREYIQ---LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNE 216
S R + L P + PKM+V LP ++ KRL+EGD+T+ ELVAAR+D W+
Sbjct: 349 DSPQKRRNVGTMLLMPVDSRCPKMLVPPNGLPANLLKRLKEGDSTVATELVAARVDTWSV 408
Query: 217 ESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSR 276
+S P A V+ G+GGE+EPQ+ AIL+EN F SL CLP PW++P E+ R
Sbjct: 409 DSYLPYATVVRSLGQGGEIEPQLKAILFENNAHPPDFPQASLDCLPKTPWKIPASEIKKR 468
Query: 277 KDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRS 336
DLR++ IF+IDP TA DLDDALS E+L +G RVGVHIADVSYF+ PG+ LD EA RS
Sbjct: 469 VDLRSYRIFSIDPPTARDLDDALSFEKLQNGEIRVGVHIADVSYFITPGSELDKEAAHRS 528
Query: 337 TSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCK 396
TS+Y+ QR +PMLP LL EE+ SLNPGVDRLAFS+ W ++++G+++++W+GRTVI SC K
Sbjct: 529 TSIYLEQRVLPMLPRLLCEELCSLNPGVDRLAFSVIWTMSASGEILEQWVGRTVINSCAK 588
Query: 397 LSYEHAQDIIDGKFD----VESSNTL---GEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 449
L+YEHAQD+I+G F E+ N+L G+ PQL+G WS+VV + SL++++K +
Sbjct: 589 LTYEHAQDMIEGVFTDMEGAEARNSLSKSGKPLPQLHGNHSWSEVVSDVLSLHDMAKKRR 648
Query: 450 DKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 509
+ R GAL+L NSK F DE GTPYDS + D NF+ EEFMLLAN T A++I+ AF
Sbjct: 649 ESRIEGGALKLNNSKITFSLDEDGTPYDSSMYMTRDSNFVVEEFMLLANMTVAKIISNAF 708
Query: 510 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 569
P+SALLRRHP PNMRKLREFE FC K+ LDTSSSG SLE+ ++++ D VL++IL
Sbjct: 709 PESALLRRHPEPNMRKLREFEEFCEKNDFDLDTSSSGALRLSLEKMQDRVSHDPVLYNIL 768
Query: 570 INYATRPMQLASYFCSGDFKD-DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
+ +AT+PMQLA YFC+G+ KD + +WGHYALA P+YTHFTSP+RRYPD++VHR L+AALE
Sbjct: 769 MLFATKPMQLAKYFCTGELKDKEEEWGHYALACPLYTHFTSPIRRYPDVLVHRMLSAALE 828
Query: 629 AEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADIL 688
AE++ L + ++ + ++ +++ + AL++AA ++ +P L
Sbjct: 829 AEEIIGMPESSLSHSR-------QYFSSAKSERGVSDTPVAQNALTIAANRHKLPACSDL 881
Query: 689 VNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIE 748
+ +A HCN+RK+A RNVK+A KLY+W +LKKK LLS++RVLALGP+FM++YI K+A+E
Sbjct: 882 LGIAAHCNERKMASRNVKEASDKLYLWAMLKKKGGLLSDSRVLALGPKFMSLYICKIAME 941
Query: 749 RRIYYDEVEGLIVEWLETTSTLVLSLCAHKRSFKRGGPGNY----RALEEVALVVRPNDL 804
RRIYY+E+EG+ EW E T TLVL + K++ ++G G + R + ++A VV P D
Sbjct: 942 RRIYYEEIEGVNAEWFEATGTLVLDISPTKKTPRKGSQGKFGRQQRTVADIATVVNPAD- 1000
Query: 805 KEEHGMFGGSVNKCFTTDANAKRQCSGSSSNSGVDPGVFPLTIPLLSTIPVALNAIGGGD 864
G N F ++ G +S++ V+P V PLT+ L S +PV+L++IGGG
Sbjct: 1001 --------GLGN--FPYESPPAFDVEGLASDAEVEPTVLPLTLRLFSAVPVSLHSIGGGA 1050
Query: 865 G--PLEIGVRLYMSSY 878
PL+I V+LY+SSY
Sbjct: 1051 DHRPLDIAVKLYVSSY 1066
>gi|302803113|ref|XP_002983310.1| hypothetical protein SELMODRAFT_445437 [Selaginella moellendorffii]
gi|300148995|gb|EFJ15652.1| hypothetical protein SELMODRAFT_445437 [Selaginella moellendorffii]
Length = 1046
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/784 (48%), Positives = 511/784 (65%), Gaps = 75/784 (9%)
Query: 97 GMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN 156
G A+E++ A++ + P KRPTG+VVSI+ +S RRD +VGFL+V
Sbjct: 335 GSTALEKVQALLQATPGKRPTGKVVSILSKSRRRDAVVGFLSVK---------------- 378
Query: 157 RSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNE 216
P R + LTP K+PKMVVL LP+ I +RL +GD + EL+AA +D W+
Sbjct: 379 ---FQPPTRNQMVLTPVDAKFPKMVVLPDSLPEVIAQRLRDGDRKMGNELLAACVDRWDC 435
Query: 217 ESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSR 276
SP+P A + H G+ GE+E Q AIL+E+A+ + F PE+++CLP VPW +P++EL R
Sbjct: 436 NSPYPLAIITHCLGQAGELEAQTAAILFEHAVHSAEFPPEAMACLPRVPWSIPEKELQRR 495
Query: 277 KDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRS 336
+DLR+ +FTIDP TA DLDDALS+E L DG++RVGVHIADVSYFV G+ LD EAQ RS
Sbjct: 496 RDLRSRRVFTIDPVTARDLDDALSVEHLGDGLTRVGVHIADVSYFVHAGSGLDKEAQQRS 555
Query: 337 TSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCK 396
TSVY++Q+ +PMLP LL EE+ SL PGVDRLAFS+ WDL+S G +V +WIGRT I+SCCK
Sbjct: 556 TSVYLIQQVLPMLPRLLCEELCSLQPGVDRLAFSVMWDLDSTGQIVKQWIGRTAIKSCCK 615
Query: 397 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 456
LSY AQ+I+DG F + P L G F W +V IK+LY ++K L++ R DG
Sbjct: 616 LSYGDAQEIVDGTFSEK---------PGLSGNFSWQEVAADIKTLYNIAKQLEESRIRDG 666
Query: 457 ALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 516
ALRL+ K VF D G P+++ + + N L +EFMLLAN + A+VI+RAFPD ALLR
Sbjct: 667 ALRLDTGKLVFALDGDGNPHETSFYEQMESNKLVQEFMLLANVSVAKVISRAFPDCALLR 726
Query: 517 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 576
RHP P+ RKL EF+ FC KHG L T SS H SLE RE+LKDD VL I+ YAT+P
Sbjct: 727 RHPEPSSRKLLEFQEFCKKHGFVLKTDSSADLHASLEVLREELKDDPVLLSIVTLYATKP 786
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
MQ+A YFC+G KD DWGHYALA PVYTHFTSP+RRYPD+VVHRTL+AALEAEKL K
Sbjct: 787 MQVAKYFCTGRDKDG-DWGHYALAMPVYTHFTSPIRRYPDIVVHRTLSAALEAEKLLNKS 845
Query: 637 RRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCN 696
LTG + S + E L +AA K+ + + VA HCN
Sbjct: 846 -----------------LTG----PEDLVSTKDYEVLQLAASKHRISDPAEMALVADHCN 884
Query: 697 DRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+RK+A +NV++A +LY+W +L++++ LLS+A V+ LGP+FM++Y+ K+A+ERR+YYDEV
Sbjct: 885 ERKMASKNVQEATDRLYLWTMLQRRKGLLSDACVVGLGPKFMSLYVSKIAMERRLYYDEV 944
Query: 757 EGLIVEWLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPN-DLKEEHGMFGGSV 815
EGL V+WLE T TLVL C ++ ++ R++ +VA+V P D +E G
Sbjct: 945 EGLKVDWLENTGTLVLDYCRPRQHSRK---AKSRSISDVAVVSNPAMDPDDETGNL---- 997
Query: 816 NKCFTTDANAKRQCSGSSSNSGVDPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGVRLYM 875
S + ++P PLT+ L S IPV ++A+GG PL+IGVR+Y+
Sbjct: 998 -----------------DSLTMIEPEAMPLTLRLFSHIPVLIHALGGDSSPLDIGVRVYV 1040
Query: 876 SSYM 879
+SY+
Sbjct: 1041 TSYL 1044
>gi|302811896|ref|XP_002987636.1| hypothetical protein SELMODRAFT_158922 [Selaginella moellendorffii]
gi|300144528|gb|EFJ11211.1| hypothetical protein SELMODRAFT_158922 [Selaginella moellendorffii]
Length = 863
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/796 (48%), Positives = 515/796 (64%), Gaps = 75/796 (9%)
Query: 84 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 143
+S+E S G A+E++ A++ + P KRPTG+VVSI+ +S RRD +VGFL+V
Sbjct: 139 ESSEDSGSLLSGPGSTALEKVQALLQATPGKRPTGKVVSILSKSRRRDAVVGFLSVK--- 195
Query: 144 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 203
P R + LTP K+PKMVVL LP+ I +RL +GD +
Sbjct: 196 ----------------FQPPTRNQMVLTPVDAKFPKMVVLPDSLPEVIAQRLRDGDRKMG 239
Query: 204 MELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
EL+AA +D W+ SP+P A + H G+ GE+E Q AIL+E+A+ + F PE+++CLP
Sbjct: 240 NELLAACVDRWDCNSPYPLAIITHCLGQAGELEAQTAAILFEHAVHSAEFPPEAMACLPR 299
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VPW +P++EL R+DLR+ +FTIDP TA DLDDALS+E L DG++RVGVHIADVSYFV
Sbjct: 300 VPWSIPKKELQRRRDLRSRRVFTIDPVTARDLDDALSVEHLGDGLTRVGVHIADVSYFVH 359
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ LD EAQ RSTSVY++++ +PMLP LL EE+ SL PGVDRLAFS+ WDL+S G +V
Sbjct: 360 AGSGLDKEAQQRSTSVYLIEQVLPMLPRLLCEELCSLQPGVDRLAFSVMWDLDSTGQIVK 419
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
+WIGRT I+SCCKLSY AQ+IIDG F + P L G F W +V IK+LY
Sbjct: 420 QWIGRTAIKSCCKLSYGDAQEIIDGTFSEK---------PGLSGNFSWQEVAADIKTLYN 470
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
++K L++ R DGALRL+ K VF D G P+++ + + N L +EFMLLAN + A+
Sbjct: 471 IAKQLEESRIRDGALRLDTGKLVFALDGDGNPHETSFYEQMESNKLVQEFMLLANVSVAK 530
Query: 504 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 563
VI+RAFPD ALLRRHP P+ RKL EF+ FC KHG L T SS H SLE RE+LKDD
Sbjct: 531 VISRAFPDCALLRRHPEPSSRKLLEFQEFCKKHGFVLKTDSSADLHASLEVLREELKDDP 590
Query: 564 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
VL I+ YAT+PMQ+A YFC+G KD DWGHYALA PVYTHFTSP+RRYPD+VVHRTL
Sbjct: 591 VLLSIVTLYATKPMQVAKYFCTGRDKDG-DWGHYALAMPVYTHFTSPIRRYPDIVVHRTL 649
Query: 624 NAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVP 683
AALEAEK V + LTG + S + E L +AA K+ +
Sbjct: 650 TAALEAEK-----------------VLNKSLTG----PEDLVSTKDYEVLQLAASKHRIS 688
Query: 684 CADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIE 743
+ +A HCN+RK+A +NV++A +LY+W +L++++ LLS+A V+ LGP+FM++Y+
Sbjct: 689 DPAEMALLADHCNERKMASKNVQEATDRLYLWTMLQRRKGLLSDACVVGLGPKFMSLYVS 748
Query: 744 KLAIERRIYYDEVEGLIVEWLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPN- 802
K+A+ERR+YYDEVEGL V+WLE T TLVL C ++ ++ R++ +VA+V P
Sbjct: 749 KIAMERRLYYDEVEGLKVDWLENTGTLVLDYCRPRQHSRK---AKCRSISDVAVVSNPAM 805
Query: 803 DLKEEHGMFGGSVNKCFTTDANAKRQCSGSSSNSGVDPGVFPLTIPLLSTIPVALNAIGG 862
D +E G N R + ++P PLT+ L S IPV ++A+GG
Sbjct: 806 DPDDETG--------------NLDRL-------TRIEPEAMPLTLRLFSHIPVLIHALGG 844
Query: 863 GDGPLEIGVRLYMSSY 878
PL+IGVR+Y++SY
Sbjct: 845 DSSPLDIGVRVYVTSY 860
>gi|159470313|ref|XP_001693304.1| 3'-5' exoribonuclease [Chlamydomonas reinhardtii]
gi|158277562|gb|EDP03330.1| 3'-5' exoribonuclease [Chlamydomonas reinhardtii]
Length = 1061
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 266/736 (36%), Positives = 387/736 (52%), Gaps = 109/736 (14%)
Query: 102 ERLSAMISSYPTKRP----TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAK--- 154
+ + A+++ RP TG+VV+I+ SP+R+ +VG L + + G + A+
Sbjct: 207 DEVKALVTKLSVARPELRITGKVVAILTPSPKREHVVGLLQLGA--SAPGVAALSAQPLP 264
Query: 155 -----------KNRSSLSVPDREY--IQLTPTHPKYPKMVVL---VKDLPDSIKKRLEEG 198
+ S+ +VP L P P+ P+ VV +K+LP ++ + L G
Sbjct: 265 AAVAALQAAGSSSGSASTVPSSAVPTCYLMPLDPRLPRCVVRPSELKNLPTALLEELVAG 324
Query: 199 -DATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPES 257
D L++ARI EW+ P + G+ GE+E + A+L I F P+
Sbjct: 325 PDKAENRTLMSARIAEWSSSHTQPAVTLRASLGQAGEIESETAALLEMEGIRSGDFEPDV 384
Query: 258 LSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 317
L+CLP PW + ++++ +R+D R+ IF+IDP TA DLDDALSI L G RVGVHIAD
Sbjct: 385 LACLPPTPWRITEQDIAARRDYRSTRIFSIDPPTAKDLDDALSISPLPGGGWRVGVHIAD 444
Query: 318 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 377
V++F+ P +ALD+EA R+TS Y++QR IPMLP LL EE+ SLNPGV+R AFS+ W+L++
Sbjct: 445 VAHFIPPFSALDVEAGKRATSTYLVQRVIPMLPPLLCEELCSLNPGVERFAFSVEWELDA 504
Query: 378 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 437
G + W GR+VIRSC KLSY Q +I+G+FD + QL+G W +VV
Sbjct: 505 KGAIKSTWFGRSVIRSCAKLSYPLVQAMIEGRFDPATCPV------QLHGGATWDEVVGD 558
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 497
+L+ ++K ++ RF GALRL+ + + D+ G P + +++ N L EEFMLLA
Sbjct: 559 SLALWGLAKQMRAARFAGGALRLDGVRLFYQLDKDGNPLAAAPYVQQEANQLVEEFMLLA 618
Query: 498 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR- 556
N + A+ IA F D A+LRRHP PN KL+ + + GL +D SS+ H L + R
Sbjct: 619 NMSVADCIADTFRDRAMLRRHPPPNATKLKVLQEVAAAAGLPVDVSSAASIHNGLNELRR 678
Query: 557 -----------------EKLKDDYVL---------------------FDILINYATRPMQ 578
E DD + ++L+ ATRPMQ
Sbjct: 679 AAAGAPSAAPQQQQHEEEGGDDDRAVVRSGLAEAGVLGADLERNRRTVELLVMLATRPMQ 738
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRR 638
LA YFC+G ++ W HYALA YTHFTSP+RRYPDLVVHR L AALE
Sbjct: 739 LAEYFCTGLVDEEAAWRHYALAVRAYTHFTSPIRRYPDLVVHRLLAAALE---------- 788
Query: 639 MLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDR 698
VR GR ++ AA ++ + + VA HCNDR
Sbjct: 789 ----------VRA-----------------GRLSVEEAAQRHRLLDTRLAGMVAEHCNDR 821
Query: 699 KLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEG 758
+LA RN +D +KLY+ +LL+++ V+ G R+ +YI + E R+ DE G
Sbjct: 822 RLAARNAQDGSLKLYLCVLLRRQPVVTMGTVSSLGGDRYFALYISEFGHEVRLELDEA-G 880
Query: 759 LIVEWLETTSTLVLSL 774
++++ T VL+L
Sbjct: 881 VLLQANFNPGTKVLTL 896
>gi|296205873|ref|XP_002749939.1| PREDICTED: DIS3-like exonuclease 2 [Callithrix jacchus]
Length = 880
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 259/679 (38%), Positives = 357/679 (52%), Gaps = 88/679 (12%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDAPVTKDETTCISQDTRALPEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPHDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG VGVH
Sbjct: 350 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGSFEVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L AG ++D W GRT+IRSC KLSYEHAQ +I+ + L P + + +V
Sbjct: 470 LTPAGKILDEWFGRTIIRSCTKLSYEHAQSMIESPTEKIPVTEL----PPISPEHSSEEV 525
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEF 493
+++ +L+ ++K L+ +RF DGALRL+ K F D E G P + D N L EEF
Sbjct: 526 HQAVLNLHGIAKRLRQQRFEDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEF 585
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
MLLAN A I RAFP+ ALLRRHP P R L + FC + GL +D SS+G ++SL
Sbjct: 586 MLLANMAVAHKIHRAFPEQALLRRHPPPQTRMLNDLMEFCDQMGLPMDFSSAGALNKSLT 645
Query: 554 QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
Q K ++LIN +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR
Sbjct: 646 QTFGDDKHSLARKEVLINMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRR 705
Query: 614 YPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREAL 673
+ D++VHR L AAL RE L
Sbjct: 706 FADVLVHRLLAAALGY----------------------------------------REQL 725
Query: 674 SVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLAL 733
+A D L A HCNDR++A + V++ L+ +L+K+ L SEA V+ +
Sbjct: 726 DLA--------PDTLQKQADHCNDRRMASKRVQELSTGLFFAVLVKESGPLESEAMVMGV 777
Query: 734 GPRFMTIYIEKLAIERRIY 752
+ + + + +++RIY
Sbjct: 778 LNQAFDVLVLRYGVQKRIY 796
>gi|397502559|ref|XP_003821921.1| PREDICTED: DIS3-like exonuclease 2 [Pan paniscus]
Length = 889
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 258/679 (37%), Positives = 357/679 (52%), Gaps = 88/679 (12%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDAPVTKDETTCISQDTRALSEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW VP EE R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVH
Sbjct: 350 EVLECLPQGLPWTVPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+IRSC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 470 LTPEGKILDEWFGRTIIRSCTKLSYEHAQSMIESSTEKIPAKEL----PPISPEHSSEEV 525
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEF 493
+++ +L+ ++K L+ +RF DGALRL+ K F D E G P + + N L EEF
Sbjct: 526 HQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRESNKLVEEF 585
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
MLLAN A I RAFP+ ALLRRHP P R L + FC + GL +D SS+G ++SL
Sbjct: 586 MLLANMAVAHKIHRAFPEQALLRRHPPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSLT 645
Query: 554 QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
Q K ++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR
Sbjct: 646 QTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRR 705
Query: 614 YPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREAL 673
+ D++VHR L AAL G R R D A
Sbjct: 706 FADVLVHRLLAAAL--------------------GYRERL--------DMA--------- 728
Query: 674 SVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLAL 733
D L A HCNDR++A + V++ L+ +L+K+ L SEA V+ +
Sbjct: 729 -----------PDTLQKQADHCNDRRMASKRVQELSTSLFFAVLVKESGPLESEAMVMGV 777
Query: 734 GPRFMTIYIEKLAIERRIY 752
+ + + + +++RIY
Sbjct: 778 LKQAFDVLVLRYGVQKRIY 796
>gi|332815690|ref|XP_003309564.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like exonuclease 2 [Pan
troglodytes]
gi|410221318|gb|JAA07878.1| DIS3 mitotic control homolog-like 2 [Pan troglodytes]
gi|410262418|gb|JAA19175.1| DIS3 mitotic control homolog-like 2 [Pan troglodytes]
gi|410305198|gb|JAA31199.1| DIS3 mitotic control homolog-like 2 [Pan troglodytes]
gi|410349225|gb|JAA41216.1| DIS3 mitotic control homolog-like 2 [Pan troglodytes]
Length = 887
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 258/679 (37%), Positives = 357/679 (52%), Gaps = 88/679 (12%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDAPVTKDETTCISQDTRALSEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW VP EE R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVH
Sbjct: 350 EVLECLPQGLPWTVPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+IRSC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 470 LTPEGKILDEWFGRTIIRSCTKLSYEHAQSMIESSTEKIPAKEL----PPISPEHSSEEV 525
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEF 493
+++ +L+ ++K L+ +RF DGALRL+ K F D E G P + + N L EEF
Sbjct: 526 HQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRESNKLVEEF 585
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
MLLAN A I RAFP+ ALLRRHP P R L + FC + GL +D SS+G ++SL
Sbjct: 586 MLLANMAVAHKIHRAFPEQALLRRHPPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSLT 645
Query: 554 QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
Q K ++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR
Sbjct: 646 QTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRR 705
Query: 614 YPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREAL 673
+ D++VHR L AAL G R R D A
Sbjct: 706 FADVLVHRLLAAAL--------------------GYRERL--------DMA--------- 728
Query: 674 SVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLAL 733
D L A HCNDR++A + V++ L+ +L+K+ L SEA V+ +
Sbjct: 729 -----------PDTLQKQADHCNDRRMASKRVQELSTSLFFAVLVKESGPLESEAMVMGV 777
Query: 734 GPRFMTIYIEKLAIERRIY 752
+ + + + +++RIY
Sbjct: 778 LKQAFDVLVLRYGVQKRIY 796
>gi|134288890|ref|NP_689596.4| DIS3-like exonuclease 2 isoform 1 [Homo sapiens]
gi|296439471|sp|Q8IYB7.4|DI3L2_HUMAN RecName: Full=DIS3-like exonuclease 2
gi|119591394|gb|EAW70988.1| hCG2013107, isoform CRA_c [Homo sapiens]
Length = 885
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 257/679 (37%), Positives = 357/679 (52%), Gaps = 88/679 (12%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDAPVTKDETTCISQDTRALSEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVH
Sbjct: 350 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+IRSC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 470 LTPEGKILDEWFGRTIIRSCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEV 525
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEF 493
+++ +L+ ++K L+ +RF DGALRL+ K F D E G P + + N L EEF
Sbjct: 526 HQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRESNKLVEEF 585
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
MLLAN A I RAFP+ ALLRRHP P R L + FC + GL +D SS+G ++SL
Sbjct: 586 MLLANMAVAHKIHRAFPEQALLRRHPPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSLT 645
Query: 554 QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
Q K ++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR
Sbjct: 646 QTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRR 705
Query: 614 YPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREAL 673
+ D++VHR L AAL G R R D A
Sbjct: 706 FADVLVHRLLAAAL--------------------GYRERL--------DMA--------- 728
Query: 674 SVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLAL 733
D L A HCNDR++A + V++ L+ +L+K+ L SEA V+ +
Sbjct: 729 -----------PDTLQKQADHCNDRRMASKRVQELSTSLFFAVLVKESGPLESEAMVMGI 777
Query: 734 GPRFMTIYIEKLAIERRIY 752
+ + + + +++RIY
Sbjct: 778 LKQAFDVLVLRYGVQKRIY 796
>gi|395823260|ref|XP_003784908.1| PREDICTED: DIS3-like exonuclease 2 [Otolemur garnettii]
Length = 884
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 240/590 (40%), Positives = 330/590 (55%), Gaps = 58/590 (9%)
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
R+Y +P+ + P++ V +KD P R ++ T L RI +W E+S F
Sbjct: 263 RKYALFSPSDHRVPRVYVPLKDCPQDFVTRPKDYANT----LFICRIVDWKEDSNFALGQ 318
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFC 283
+ G+ GE+EP+ IL E + S FS E L CLP +PW +P EE RKDLR +C
Sbjct: 319 LAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEFSKRKDLRQYC 378
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
+FTIDPSTA DLDDALS + L+DG VGVHIADVSYF+ G+ LD A R+TSVY++Q
Sbjct: 379 VFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFIPEGSDLDRVAAERATSVYLVQ 438
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
+ +PMLP LL EE+ SLNP D+L FS+ W L G ++D W GRT+IRSC KLSYEHAQ
Sbjct: 439 KVVPMLPRLLCEELCSLNPMTDKLTFSVIWTLTPKGKILDEWFGRTIIRSCTKLSYEHAQ 498
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+I+ + L P + + +V ++I +L+E++K L+ +RF DGALRL+
Sbjct: 499 SMIESPTERIPEKEL----PPISPEHSSKEVHQAILNLHEIAKQLRQQRFVDGALRLDQL 554
Query: 464 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
K F D E G P + D N L EEFMLLAN A I RAFP+ ALLRRHP P
Sbjct: 555 KLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIYRAFPERALLRRHPPPQ 614
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
+ L + FC++ GL +D SS+G ++SL + K ++L N +RPMQ+A Y
Sbjct: 615 TKMLDDLIEFCNQMGLPMDFSSAGALNKSLTKTFGNDKYSLARKEVLTNMCSRPMQMAVY 674
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPK 642
FCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 675 FCSGLLQDRAQFQHYALNVPLYTHFTSPIRRFADVLVHRLLAAAL--------------- 719
Query: 643 NNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLAC 702
G R R +E D L A HCNDR++A
Sbjct: 720 -----GYRER------------PDVE----------------PDALQKQADHCNDRRMAS 746
Query: 703 RNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
+ V++ L+ IL+K+ L SEA V+ + + + + + +++RIY
Sbjct: 747 KRVQELSTGLFFAILVKECGPLESEAMVMGVLNQAFDVLVLRYGVQKRIY 796
>gi|380809604|gb|AFE76677.1| DIS3-like exonuclease 2 [Macaca mulatta]
Length = 888
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 256/679 (37%), Positives = 355/679 (52%), Gaps = 88/679 (12%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDAPVTKDETTCISQDTRALPEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG VGVH
Sbjct: 350 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+I SC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 470 LTPEGKILDEWFGRTIICSCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEV 525
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEF 493
+++ +L++++K L+ +RF DGALRL+ K F D E G P + D N L EEF
Sbjct: 526 HQAVLNLHQIAKQLRQQRFADGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEF 585
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
MLLAN A I RAFP+ ALLRRHP P R L + FC + GL +D SS+G ++SL
Sbjct: 586 MLLANMAVAHKIHRAFPEQALLRRHPPPQTRMLNDLVEFCDQMGLPVDFSSAGALNKSLT 645
Query: 554 QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
Q K ++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR
Sbjct: 646 QTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRR 705
Query: 614 YPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREAL 673
+ D++VHR L AAL Y K M P
Sbjct: 706 FADVLVHRLLAAALG----YRKQLDMAP-------------------------------- 729
Query: 674 SVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLAL 733
D L A HCNDR++A + V++ L+ +L+K+ L SEA V+ +
Sbjct: 730 ------------DTLQKQADHCNDRRMASKRVQELSTGLFFAVLVKESGPLESEAMVMGV 777
Query: 734 GPRFMTIYIEKLAIERRIY 752
+ + + + +++RIY
Sbjct: 778 LNQAFDVLVLRYGVQKRIY 796
>gi|383415831|gb|AFH31129.1| DIS3-like exonuclease 2 [Macaca mulatta]
gi|384945330|gb|AFI36270.1| DIS3-like exonuclease 2 [Macaca mulatta]
Length = 888
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 256/679 (37%), Positives = 355/679 (52%), Gaps = 88/679 (12%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDAPVTKDETTCISQDTRALPEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG VGVH
Sbjct: 350 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+I SC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 470 LTPEGKILDEWFGRTIICSCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEV 525
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEF 493
+++ +L++++K L+ +RF DGALRL+ K F D E G P + D N L EEF
Sbjct: 526 HQAVLNLHQIAKQLRQQRFADGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEF 585
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
MLLAN A I RAFP+ ALLRRHP P R L + FC + GL +D SS+G ++SL
Sbjct: 586 MLLANMAVAHKIHRAFPEQALLRRHPPPQTRMLNDLVEFCDQMGLPVDFSSAGALNKSLT 645
Query: 554 QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
Q K ++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR
Sbjct: 646 QTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRR 705
Query: 614 YPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREAL 673
+ D++VHR L AAL Y K M P
Sbjct: 706 FADVLVHRLLAAALG----YRKQLDMAP-------------------------------- 729
Query: 674 SVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLAL 733
D L A HCNDR++A + V++ L+ +L+K+ L SEA V+ +
Sbjct: 730 ------------DTLQKQADHCNDRRMASKRVQELSTGLFFAVLVKESGPLESEAMVMGV 777
Query: 734 GPRFMTIYIEKLAIERRIY 752
+ + + + +++RIY
Sbjct: 778 LNQAFDVLVLRYGVQKRIY 796
>gi|351697199|gb|EHB00118.1| DIS3-like exonuclease 2, partial [Heterocephalus glaber]
Length = 881
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 275/750 (36%), Positives = 381/750 (50%), Gaps = 101/750 (13%)
Query: 13 DSNLPTEANGMH-----SDICKGKSKVDVSYEYSNCTLLSEKGIHHDDDSSSEAYNQEMI 67
+S+ P E G H S C + V V +Y DDS SE
Sbjct: 139 ESDFPEELCGHHLPKQSSKGCNDSTDVIVEAQY--------------DDSDSE------- 177
Query: 68 EREGYNYINGHHPST---SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSII 124
NGH S +D +K+S + G + S P P R +S
Sbjct: 178 --------NGHSNSQNALADGVKKLSVCAHDKGKDDASAHVTKDESTPMS-PDTRALS-- 226
Query: 125 ERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLV 184
E+S +R V ++ + G K + S L R+Y +P+ + P++ V +
Sbjct: 227 EKSLQRSAKVVYILEKKHSRAATGILKLLAEKNSDLF---RKYALFSPSDHRVPRIYVPL 283
Query: 185 KDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILY 244
KD P R ++ T L RI +W E+S F + G+ GE+EP+ IL
Sbjct: 284 KDCPQDFVTRPKDYSTT----LFICRIVDWKEDSNFALGQLAKSLGQAGEIEPETEGILT 339
Query: 245 ENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIER 303
E + S FS E L CLP +PW +P EE+ R+DLR C+FTIDP TA DLDDALS
Sbjct: 340 EYGVDFSDFSSEVLECLPRSLPWTIPPEEVSKRRDLRKDCVFTIDPLTARDLDDALSCRP 399
Query: 304 LSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPG 363
L+DG +VGVHIADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP
Sbjct: 400 LADGTFQVGVHIADVSYFVPEGSQLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPM 459
Query: 364 VDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP 423
D+L FS+ W L S G +++ W GRT+IRSC KLSYEHAQ +I+ + L P
Sbjct: 460 TDKLTFSVVWTLTSEGKILEEWFGRTIIRSCTKLSYEHAQSMIERPAERIPEQEL----P 515
Query: 424 QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSG 482
+ + +V ++I +L+ ++K L+ +RFTDGALRL+ K F D E G P +
Sbjct: 516 PISPEHCIEEVHQAILNLHRIAKWLRQQRFTDGALRLDQLKLAFTLDHETGLPQGCHIYE 575
Query: 483 REDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDT 542
D N L EEFMLLAN A I RAFP+ ALLRRHP P + L + FCS+ GL +D
Sbjct: 576 YRDSNRLVEEFMLLANMAVAHRIHRAFPEQALLRRHPPPQTKMLGDLVEFCSQMGLAVDV 635
Query: 543 SSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFP 602
SS+G ++SL + K ++L N +RPMQ+A YFCSG +D + HYAL P
Sbjct: 636 SSAGALNKSLTRIFGADKYSRARKEVLTNMFSRPMQMALYFCSGVLQDPAQFRHYALNVP 695
Query: 603 VYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKD 662
+YTHFTSP+RR+ D++VHR L AAL G R R D
Sbjct: 696 LYTHFTSPIRRFADVLVHRLLAAAL--------------------GYRERL--------D 727
Query: 663 AAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKE 722
A S L A CNDR++A + V++ L+ +L+K+
Sbjct: 728 AEPS--------------------ALQKQADLCNDRRMASKRVQELSTGLFFAVLVKESG 767
Query: 723 VLLSEARVLALGPRFMTIYIEKLAIERRIY 752
L SEA V+ + + + + + +++RIY
Sbjct: 768 PLESEAMVMGVLNQAFDVLVLRFGVQKRIY 797
>gi|402889706|ref|XP_003908148.1| PREDICTED: DIS3-like exonuclease 2-like, partial [Papio anubis]
Length = 765
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 267/734 (36%), Positives = 376/734 (51%), Gaps = 111/734 (15%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 82 DGDAPVTKDETTCISQDTRALPEKSLQR-------------SAKVVYILEKKHSR-AATG 127
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 128 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 171
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 172 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 227
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG VGVH
Sbjct: 228 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVH 287
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 288 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 347
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+I SC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 348 LTPEGKILDEWFGRTIICSCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEV 403
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEF 493
+++ +L++++K L+ +RF DGALRL+ K F D E G P + D N L EEF
Sbjct: 404 QQAVLNLHQIAKQLRQQRFADGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEF 463
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
MLLAN A I RAFP+ ALLRRHP P R L + FC + GL +D SS+G ++SL
Sbjct: 464 MLLANMAVAHKIHRAFPEQALLRRHPPPQTRMLNDLVEFCDQMGLPVDFSSAGALNKSLT 523
Query: 554 QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
Q K ++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR
Sbjct: 524 QTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRR 583
Query: 614 YPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREAL 673
+ D++VHR L AAL RE L
Sbjct: 584 FADVLVHRLLAAALGY----------------------------------------REQL 603
Query: 674 SVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLAL 733
+A D L A HCNDR++A + V++ L+ +L+K+ L SEA V+ +
Sbjct: 604 DMA--------PDTLQKQADHCNDRRMASKRVQELSTGLFFAVLVKESGPLESEAMVMGV 655
Query: 734 GPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVLSLCAHKRSFKRGGPGNYRALE 793
+ + + + +++RIY + L+L +H F++ G
Sbjct: 656 LNQAFDVLVLRYGVQKRIYCN----------------ALALRSHH--FQKVGKK-----P 692
Query: 794 EVALVVRPNDLKEE 807
E+ LV P D+++E
Sbjct: 693 ELTLVWEPEDMEQE 706
>gi|403291368|ref|XP_003936767.1| PREDICTED: DIS3-like exonuclease 2 [Saimiri boliviensis
boliviensis]
Length = 887
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 256/679 (37%), Positives = 356/679 (52%), Gaps = 88/679 (12%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDVPVTKDETVCISQDARALPEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPHDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + + FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFTDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG VGVH
Sbjct: 350 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRTVIRSC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 470 LTPGGKILDEWFGRTVIRSCTKLSYEHAQSMIESPTEKIPATEL----PPISPEHSSEEV 525
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEF 493
+++ +L+ ++K L+ +RF DGALRL+ K F D E G P + D N L EEF
Sbjct: 526 HQAVLNLHGIAKRLRQQRFADGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEF 585
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
MLLAN A I RAFP+ ALLRRHP P R L + FC + GL +D SS+G ++SL
Sbjct: 586 MLLANMAVAHKIHRAFPEQALLRRHPPPQTRMLNDLMEFCDQMGLPVDFSSAGALNKSLT 645
Query: 554 QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
Q K ++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR
Sbjct: 646 QTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRR 705
Query: 614 YPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREAL 673
+ D++VHR L A +L RE L
Sbjct: 706 FADVLVHRLL----------------------------------------AATLGYRERL 725
Query: 674 SVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLAL 733
+A D L A HCNDR++A + V++ L+ +L+K+ L SEA V+ +
Sbjct: 726 DLA--------PDTLQKQADHCNDRRMASKRVQELSTGLFFAVLVKESGPLESEAMVMGV 777
Query: 734 GPRFMTIYIEKLAIERRIY 752
+ + + + +++RIY
Sbjct: 778 LNQAFDVLVLRYGVQKRIY 796
>gi|149711619|ref|XP_001495438.1| PREDICTED: DIS3 mitotic control homolog (S. cerevisiae)-like 2
[Equus caballus]
Length = 881
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 248/638 (38%), Positives = 342/638 (53%), Gaps = 75/638 (11%)
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 176
+ +VV I+E+ R GFL + A KN R+Y +P+ +
Sbjct: 232 SAKVVYILEKKHSR-AATGFLKLL------------ADKNSELF----RKYALFSPSDHR 274
Query: 177 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 236
P++ V +KD P R ++ T L RI +W E+S F + G+ GE+E
Sbjct: 275 VPRIYVPLKDCPQDFVTRPKDYANT----LFICRIVDWKEDSNFALGQLAKSLGQAGEIE 330
Query: 237 PQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
P+ IL E + S FS E L CLP +PW +P EE R+DLR CIFTIDPSTA DL
Sbjct: 331 PETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEFNKRRDLRKDCIFTIDPSTARDL 390
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS + L+DG VGVHIADVSYFV G+ LD A R+TSVY++Q+ IPMLP LL E
Sbjct: 391 DDALSCKPLTDGNFEVGVHIADVSYFVPEGSDLDKVAAERATSVYLVQKVIPMLPRLLCE 450
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
E+ SLNP D+L FS+ W L G ++D W GRT+IRSC KLSYEHAQ +I+ +
Sbjct: 451 ELCSLNPMTDKLTFSVIWTLTPKGKILDEWFGRTIIRSCTKLSYEHAQSMIESP----TK 506
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
+ P + + +V R++ +L+ ++K L+ +RF DGALRL+ K F D E G
Sbjct: 507 KIPEKELPPISPEHTSEEVHRAVLNLHGIAKELRKQRFVDGALRLDQLKLAFTLDHETGL 566
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + D N L EEFMLLAN A I RAFP+ ALLRRHP P + L + FC
Sbjct: 567 PQGCHIYEYRDSNKLVEEFMLLANMAVAHKIHRAFPERALLRRHPPPQTKMLNDLVEFCD 626
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
+ GL +D SS+G ++SL + K ++L N +RPMQ+A YFCSG +D +
Sbjct: 627 QMGLSMDFSSAGALNKSLTETFGDDKYSLARKEVLTNMCSRPMQMALYFCSGMLQDQAQF 686
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HYAL P+YTHFTSP+RR+ D++VHR L
Sbjct: 687 RHYALNVPLYTHFTSPIRRFADVLVHRLL------------------------------- 715
Query: 655 TGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYM 714
A +L RE +V D L A HCNDR++A + V++ L+
Sbjct: 716 ---------AATLGYREVPNVE--------PDALQKQADHCNDRRMASKRVQELSTSLFF 758
Query: 715 WILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
+L+K+ L SEA VL + + + + + +++R+Y
Sbjct: 759 SVLVKESGPLESEAMVLGVLNQAFDVLVLRYGVQKRVY 796
>gi|55725227|emb|CAH89479.1| hypothetical protein [Pongo abelii]
Length = 863
Score = 417 bits (1073), Expect = e-113, Method: Compositional matrix adjust.
Identities = 256/679 (37%), Positives = 355/679 (52%), Gaps = 88/679 (12%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDAPVTKDETTCISQDTRALPEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG VGVH
Sbjct: 350 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELRSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+I SC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 470 LTPEGKILDEWFGRTIICSCTKLSYEHAQSMIENPTEKIPAKEL----PPISPEHSSEEV 525
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEF 493
+++ +L+ ++K L+ +RF DGALRL+ K F D E G P + D N L EEF
Sbjct: 526 HQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEF 585
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
MLLAN A I RAFP+ ALLRRHP+P R L + FC + GL +D SS+G ++SL
Sbjct: 586 MLLANMAVAHKIHRAFPEQALLRRHPSPQTRMLSDLVEFCDQMGLLVDLSSAGALNKSLT 645
Query: 554 QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
Q K ++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR
Sbjct: 646 QTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPARFRHYALNVPLYTHFTSPIRR 705
Query: 614 YPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREAL 673
+ D++VHR L AL G R R D A
Sbjct: 706 FADVLVHRLLAVAL--------------------GYRERL--------DMA--------- 728
Query: 674 SVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLAL 733
D L A HCNDR++A + V++ L+ +L+K+ L SEA V+ +
Sbjct: 729 -----------PDTLQKQADHCNDRRMASKRVQELSTSLFFAVLVKESGPLESEAMVMGV 777
Query: 734 GPRFMTIYIEKLAIERRIY 752
+ + + + +++RIY
Sbjct: 778 LNQAFDVLVLRYGVQKRIY 796
>gi|255076623|ref|XP_002501986.1| predicted protein [Micromonas sp. RCC299]
gi|226517251|gb|ACO63244.1| predicted protein [Micromonas sp. RCC299]
Length = 1069
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 262/685 (38%), Positives = 376/685 (54%), Gaps = 76/685 (11%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQ------------------WFNYKGGSRKDAKKN 156
RPTGRVV++ + SPRR+ +VG++ + N +GG+ A +
Sbjct: 284 RPTGRVVAVSQTSPRRETVVGYVGFAEEEFGFGGGRNGKGGTGVPTRNPEGGTGTPASRK 343
Query: 157 RSSLSVPDR-EYIQLTPTHPKYPKMVVLVKD--LPDSIKK-RLEEGDATIEMELVAARID 212
PD ++L PT PK P M+V + LP I +E G A ++ LV+AR+
Sbjct: 344 GKEERYPDNIPPLRLYPTDPKLPWMIVDMSPSFLPAPIAALAVENGGAGLKGILVSARVS 403
Query: 213 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC-CSGFSPESLSCLPCVP------ 265
+W+ +P + G GE+E + A++ EN I F+ +L+CLP VP
Sbjct: 404 KWSTSYVWPHCQLRESLGMAGELETETAALVAENNILGVEDFTEAALACLPAVPPKESGL 463
Query: 266 -WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
W+VP+ E +R+D + +IDP TA DLDDAL E DG VGVHIADVS+F+
Sbjct: 464 TWKVPEAERAARRDFTGVRVASIDPPTARDLDDALHAETRPDGTLVVGVHIADVSHFIPA 523
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
G+ALD EAQ R+TS Y++QR +PMLP LL E++ SLNPGV+RL FS+ W++ G V
Sbjct: 524 GSALDKEAQQRATSTYLVQRVMPMLPRLLCEDLCSLNPGVERLTFSVEWEMTPDGVVKSE 583
Query: 385 WIGRTVIRSCCKLSYEHAQDII----DGKFDVES--------SNTLGEGWPQLYGQFEW- 431
W GR +I+SC KL Y AQ +I +G+ V+ S + G P+ G W
Sbjct: 584 WFGRGIIKSCAKLDYGVAQRVIEARDEGRTGVDELLEAVNDPSGPVKVG-PEDGGPGSWD 642
Query: 432 -SDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFL 489
S V +I L ++ ++ +RF GA+RL+ SK F D + G P + + N L
Sbjct: 643 PSAVAETISLLNTAARAMRRRRFEGGAVRLDQSKLSFEIDPDTGNPRGASAYVIRESNKL 702
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFH 549
EE+ML+AN A IA A+PD A+LR HP PN RK+ E E F + G+ +D SSS H
Sbjct: 703 VEEWMLMANNAVATFIADAYPDRAMLRCHPEPNERKMGELEQFSREQGIDIDASSSRALH 762
Query: 550 QSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
SL++ +E+ D Y + ++ AT PMQLA YFC+G +D+ WGHYALA YTHFTS
Sbjct: 763 LSLQRLKEQSADAYEVAQLM---ATLPMQLARYFCTG-CQDEDSWGHYALAMDRYTHFTS 818
Query: 610 PLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEG 669
P+RRYPD+VVHR L AALEA G RGR +K + +
Sbjct: 819 PIRRYPDVVVHRLLAAALEA------------------GFRGRG------NKKHPRAPK- 853
Query: 670 REALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEAR 729
R ++ AA K+G+P +D L +A HCN+RKLA +N +D + Y+ L+ +S
Sbjct: 854 RADINAAAKKFGIPKSDKLQAIADHCNERKLAAKNCQDGSMHAYLCAFLRASPQCVS-GI 912
Query: 730 VLALGPRFMTIYIEKLAIERRIYYD 754
V A+G +++ +++ +E R+ D
Sbjct: 913 VRAVGRKYLCVFVPAYGMEVRVQMD 937
>gi|288541376|ref|NP_001165628.1| DIS3-like exonuclease 2 isoform 1 [Mus musculus]
gi|148708251|gb|EDL40198.1| RIKEN cDNA 4930429A22, isoform CRA_d [Mus musculus]
Length = 884
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/645 (37%), Positives = 346/645 (53%), Gaps = 81/645 (12%)
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
++Y +P+ + P++ V +KD P R ++ T L RI +W E+ F
Sbjct: 275 KKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDFANT----LFICRIIDWKEDCNFALGQ 330
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFC 283
+ G+ GE+EP+ IL E + S FS E L CLP +PW +P +E+ R+DLR C
Sbjct: 331 LAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPDEVGKRRDLRKDC 390
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
IFTIDPSTA DLDDAL+ RL+DG VGVHIADVSYFV G++LD A R+TSVY++Q
Sbjct: 391 IFTIDPSTARDLDDALACRRLTDGTFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQ 450
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W GRT+IRSC KLSY+HAQ
Sbjct: 451 KVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTIIRSCTKLSYDHAQ 510
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+I+ + E P + + +V +++ +L+ ++K L+ +RF DGALRL+
Sbjct: 511 SMIENP----TEKIPEEELPPISPEHSVEEVHQAVLNLHSIAKQLRRQRFVDGALRLDQL 566
Query: 464 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
K F D E G P + D N L EEFMLLAN A I R FP+ ALLRRHP P
Sbjct: 567 KLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTFPEQALLRRHPPPQ 626
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
+ L + FC + GL +D SS+G ++SL + K ++L N +RPMQ+A Y
Sbjct: 627 TKMLSDLVEFCDQMGLPMDVSSAGALNKSLTKTFGDDKYSLARKEVLTNMYSRPMQMALY 686
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPK 642
FCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL Y + + P
Sbjct: 687 FCSGMLQDQEQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAALG----YSEQPDVEPD 742
Query: 643 NNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLAC 702
++ A HCNDR++A
Sbjct: 743 TLQKQ--------------------------------------------ADHCNDRRMAS 758
Query: 703 RNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVE 762
+ V++ + L+ +L+K+ L SEA V+ + + + + + +++RIY +
Sbjct: 759 KRVQELSIGLFFAVLVKESGPLESEAMVMGVLNQAFDVLVLRFGVQKRIYCN-------- 810
Query: 763 WLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPNDLKEE 807
+L SF++ G E+ LV P+DL+EE
Sbjct: 811 ----------ALALRSYSFQKVGKK-----PELTLVWEPDDLEEE 840
>gi|24233556|ref|NP_705758.1| DIS3-like exonuclease 2 isoform 2 [Mus musculus]
gi|81900485|sp|Q8CI75.1|DI3L2_MOUSE RecName: Full=DIS3-like exonuclease 2
gi|23273603|gb|AAH36177.1| DIS3 mitotic control homolog (S. cerevisiae)-like 2 [Mus musculus]
gi|148708250|gb|EDL40197.1| RIKEN cDNA 4930429A22, isoform CRA_c [Mus musculus]
Length = 870
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/645 (37%), Positives = 346/645 (53%), Gaps = 81/645 (12%)
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
++Y +P+ + P++ V +KD P R ++ T L RI +W E+ F
Sbjct: 261 KKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDFANT----LFICRIIDWKEDCNFALGQ 316
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFC 283
+ G+ GE+EP+ IL E + S FS E L CLP +PW +P +E+ R+DLR C
Sbjct: 317 LAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPDEVGKRRDLRKDC 376
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
IFTIDPSTA DLDDAL+ RL+DG VGVHIADVSYFV G++LD A R+TSVY++Q
Sbjct: 377 IFTIDPSTARDLDDALACRRLTDGTFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQ 436
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W GRT+IRSC KLSY+HAQ
Sbjct: 437 KVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTIIRSCTKLSYDHAQ 496
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+I+ + E P + + +V +++ +L+ ++K L+ +RF DGALRL+
Sbjct: 497 SMIENP----TEKIPEEELPPISPEHSVEEVHQAVLNLHSIAKQLRRQRFVDGALRLDQL 552
Query: 464 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
K F D E G P + D N L EEFMLLAN A I R FP+ ALLRRHP P
Sbjct: 553 KLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTFPEQALLRRHPPPQ 612
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
+ L + FC + GL +D SS+G ++SL + K ++L N +RPMQ+A Y
Sbjct: 613 TKMLSDLVEFCDQMGLPMDVSSAGALNKSLTKTFGDDKYSLARKEVLTNMYSRPMQMALY 672
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPK 642
FCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL Y + + P
Sbjct: 673 FCSGMLQDQEQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAALG----YSEQPDVEPD 728
Query: 643 NNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLAC 702
++ A HCNDR++A
Sbjct: 729 TLQKQ--------------------------------------------ADHCNDRRMAS 744
Query: 703 RNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVE 762
+ V++ + L+ +L+K+ L SEA V+ + + + + + +++RIY +
Sbjct: 745 KRVQELSIGLFFAVLVKESGPLESEAMVMGVLNQAFDVLVLRFGVQKRIYCN-------- 796
Query: 763 WLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPNDLKEE 807
+L SF++ G E+ LV P+DL+EE
Sbjct: 797 ----------ALALRSYSFQKVGKK-----PELTLVWEPDDLEEE 826
>gi|260831758|ref|XP_002610825.1| hypothetical protein BRAFLDRAFT_134221 [Branchiostoma floridae]
gi|229296194|gb|EEN66835.1| hypothetical protein BRAFLDRAFT_134221 [Branchiostoma floridae]
Length = 813
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/595 (39%), Positives = 325/595 (54%), Gaps = 58/595 (9%)
Query: 164 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 223
DRE + +P + P++ V ++D P K+R E+ L ARI +W E+S F +A
Sbjct: 221 DREKVLFSPIDHRLPRLKVPLEDCPAGFKERPEDHAKF----LFIARITDWKEDSGFAEA 276
Query: 224 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VPWEVPQEELLSRKDLRNF 282
+ G G++EP+ +L EN + S FS L CLP +PW +P EE +R+DLR
Sbjct: 277 RLAKSLGEAGQIEPETEGLLVENGVDFSEFSEVVLQCLPQDLPWSIPAEEFENRRDLRLD 336
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
CIFTIDP+TA DLDDA+S +L DG VGVHIADVSYF+ TALD+ A R+TSVY++
Sbjct: 337 CIFTIDPATARDLDDAVSCNKLDDGTYEVGVHIADVSYFIQENTALDLTAACRATSVYLV 396
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
Q+ IPMLP LL E++ SLNP +RLAFS+ W L GDV+D W GRT+IRSC KLSY+HA
Sbjct: 397 QKVIPMLPRLLCEQLCSLNPAEERLAFSVIWKLTETGDVLDEWFGRTIIRSCVKLSYDHA 456
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
Q IID + + L P + DV + +LY++S+ L+ KRF GALRL+
Sbjct: 457 QSIIDNPDQLPTQEQL----PTISDGHSIQDVAERVLNLYKISQNLRKKRFDGGALRLDQ 512
Query: 463 SKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
K F D E G P + D N L EEFMLLAN A I +FP+ A+LRRHP P
Sbjct: 513 PKLAFSLDPESGLPNGCSVYQIRDSNRLIEEFMLLANMAVAHKIHESFPERAVLRRHPPP 572
Query: 522 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 581
+ + + C G+ LD SSSG HQS+ + + F IL A++PMQLA
Sbjct: 573 QPKMVEDLVKTCGTMGINLDISSSGALHQSIARYIGDDVETQATFYILTAMASKPMQLAK 632
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLP 641
YFCSG ++ + HYAL P+YTHFTSP+RRY D++VHR L A L K
Sbjct: 633 YFCSGCLPEEGMYHHYALNVPLYTHFTSPIRRYADVLVHRLLGACLGCGPAVEK------ 686
Query: 642 KNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLA 701
+AE L+G + HCNDRK A
Sbjct: 687 ---------------------SAEELQG---------------------MTDHCNDRKDA 704
Query: 702 CRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+ V++A ++ +K+ L + V+ + + + + + +L + +R Y + +
Sbjct: 705 SKRVQEASADMFFASFVKECGPLEEDGMVMGVLDQAVDVLVWRLGVVKRAYCNAI 759
>gi|26327097|dbj|BAC27292.1| unnamed protein product [Mus musculus]
Length = 831
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 240/645 (37%), Positives = 346/645 (53%), Gaps = 81/645 (12%)
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
++Y +P+ + P++ V +KD P R ++ T L RI +W E+ F
Sbjct: 222 KKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDFANT----LFICRIIDWKEDCNFALGQ 277
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFC 283
+ G+ GE+EP+ IL E + S FS E L CLP +PW +P +E+ R+DLR C
Sbjct: 278 LAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPDEVGKRRDLRKDC 337
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
IFTIDPSTA DLDDAL+ RL+DG VGVHIADVSYFV G++LD A R+TSVY++Q
Sbjct: 338 IFTIDPSTARDLDDALACRRLTDGTFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQ 397
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W GRT+IRSC KLSY+HAQ
Sbjct: 398 KVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTIIRSCTKLSYDHAQ 457
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+I+ + E P + + +V +++ +L+ ++K L+ +RF DGALRL+
Sbjct: 458 SMIENP----TEKIPEEELPPISPEHSVEEVHQAVLNLHSIAKQLRRQRFVDGALRLDQL 513
Query: 464 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
K F D E G P + D N L EEFMLLAN A I R FP+ ALLRRHP P
Sbjct: 514 KLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTFPEQALLRRHPPPQ 573
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
+ L + FC + GL +D SS+G ++SL + K ++L N +RPMQ+A Y
Sbjct: 574 TKMLSDLVEFCDQMGLPMDVSSAGALNKSLTKTFGDDKYSLARKEVLTNMYSRPMQMALY 633
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPK 642
FCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL Y + + P
Sbjct: 634 FCSGMLQDQEQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAALG----YSEQPDVEPD 689
Query: 643 NNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLAC 702
++ A HCNDR++A
Sbjct: 690 TLQKQ--------------------------------------------ADHCNDRRMAS 705
Query: 703 RNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVE 762
+ V++ + L+ +L+K+ L SEA V+ + + + + + +++RIY +
Sbjct: 706 KRVQELSIGLFFAVLVKESGPLESEAMVMGVLNQAFDVLVLRFGVQKRIYCN-------- 757
Query: 763 WLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPNDLKEE 807
+L SF++ G E+ LV P+DL+EE
Sbjct: 758 ----------ALALRSYSFQKVGKK-----PELTLVWEPDDLEEE 787
>gi|326926024|ref|XP_003209206.1| PREDICTED: DIS3-like exonuclease 2-like [Meleagris gallopavo]
Length = 831
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 246/638 (38%), Positives = 341/638 (53%), Gaps = 75/638 (11%)
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 176
T +VV I+E+ R GF+ + A KN ++ +P +
Sbjct: 199 TAKVVYILEKKHSR-AATGFIKLL------------ADKNSELF----KKCAMFSPVDHR 241
Query: 177 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 236
P+ V + D P R E+ L RI +W E+S F + G+ GE+E
Sbjct: 242 VPRAYVSLADCPSDFVARPEDYSNM----LFICRIVDWKEDSNFASGQLAKSLGQAGEIE 297
Query: 237 PQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
P+ IL E + S FSPE+L CLP +PW + E+ R+DLR CIFTIDPSTA DL
Sbjct: 298 PETEGILTEYGVDFSDFSPEALECLPQSLPWVISPGEMAKRRDLRKECIFTIDPSTAKDL 357
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS ++L DG VGVHIADVSYFVL TALD A R+TSVY++Q+ IPMLP LL E
Sbjct: 358 DDALSCKQLPDGNFEVGVHIADVSYFVLEETALDKVASERATSVYLVQKVIPMLPKLLCE 417
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
E+ SLNP DRL FS+ W + G ++D W GRTVI SC KLSY+HAQ +I+ V S
Sbjct: 418 ELCSLNPMRDRLTFSVMWKVTPKGKILDEWFGRTVICSCAKLSYDHAQSMIENPGKVFSP 477
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
L P + Q +++ +++ +L+ +++ L+ +RF DGALRL+ K F D E G
Sbjct: 478 EEL----PPISPQHSVAEIQQAVLNLHRIAQHLRKQRFIDGALRLDQLKLSFTLDQESGM 533
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + D N L EEFMLLAN A I R+FP+ ALLRRHP P + L + FC
Sbjct: 534 PQGCYIYQYRDSNKLVEEFMLLANMAVAHQIYRSFPEQALLRRHPPPQSKLLNDLMEFCH 593
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
+ GL++D SS+G H+SL + K ++L N +RPMQ+A YFC+G KD+T +
Sbjct: 594 QVGLEIDFSSAGSLHKSLNETFGADKYSEARKEVLTNMFSRPMQMALYFCTGVLKDETLF 653
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HYAL P YTHFTSP+RRY D+VVHR L+A+L P +E ++ +
Sbjct: 654 RHYALNVPFYTHFTSPIRRYADVVVHRLLSASLGISS---------PVKMEKEAIQRQ-- 702
Query: 655 TGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYM 714
A HCNDRK+A + V++ L+
Sbjct: 703 -------------------------------------AEHCNDRKMASKRVQELSTDLFF 725
Query: 715 WILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
+ +++ L SEA V+ + + + K +++RIY
Sbjct: 726 AVFVRECGPLESEAMVMGVLNEAFDVLVLKFGVQKRIY 763
>gi|426221711|ref|XP_004005051.1| PREDICTED: DIS3-like exonuclease 2 [Ovis aries]
Length = 882
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 248/638 (38%), Positives = 341/638 (53%), Gaps = 75/638 (11%)
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 176
+ +VV I+E+ R GFL + A KN R+Y +P+ +
Sbjct: 232 SAKVVYILEKKHSR-AATGFLKLL------------ADKNSELF----RKYALFSPSDHR 274
Query: 177 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 236
P++ V +KD P R ++ T L RI +W E+S F + G+ GE+E
Sbjct: 275 VPRIYVPLKDCPQDFVTRPKDYANT----LFICRIMDWKEDSNFALGQLAKSLGQAGEIE 330
Query: 237 PQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
P+ IL E + S FS E L CLP +PW VP EEL R+DLR CIFTIDPSTA DL
Sbjct: 331 PETEGILTEYGVDFSDFSSEVLECLPQGLPWTVPPEELSRRRDLRKDCIFTIDPSTARDL 390
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS + L+DG VGVHIADVSYFV G++LD A R+TSVY++Q+ +PMLP LL E
Sbjct: 391 DDALSCKPLADGNFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQKVVPMLPRLLCE 450
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
E+ SLNP D+L FS+ W L G ++ W GRT+IRSC KLSYEHAQ +I+
Sbjct: 451 ELCSLNPMTDKLTFSVIWTLTPKGKILAEWFGRTIIRSCTKLSYEHAQSMIESPTRRIPE 510
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
L P + + +V R++ +L+ ++K L+ +RF DGALRL+ K F D E G
Sbjct: 511 REL----PAISPEHTCDEVHRAVLNLHGIAKELRRQRFADGALRLDQLKLAFTLDHETGL 566
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + D N L EEFMLLAN A I RAFP+ ALLRRHP P + L + FC
Sbjct: 567 PQGCHVYEYRDSNKLVEEFMLLANMAVAHKIHRAFPEQALLRRHPPPQTKMLNDLVEFCD 626
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
+ GL +D SS+G ++SL + K ++L N +RPMQ+A YFCSG +D +
Sbjct: 627 QMGLPMDFSSAGALNKSLTEMFGDDKYSLARKEVLTNMCSRPMQMAVYFCSGALRDPAQF 686
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HYAL P+YTHFTSP+RR+ D++VHR L +AL R LP
Sbjct: 687 RHYALNVPLYTHFTSPIRRFADVLVHRLLASAL--------GYRELPDVE---------- 728
Query: 655 TGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYM 714
D L A HCNDR++A + V++ L+
Sbjct: 729 ------------------------------PDTLQKQADHCNDRRMASKRVQELSTGLFF 758
Query: 715 WILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
IL+++ L SEA V+ + + + + + +++R+Y
Sbjct: 759 AILVRESGPLESEAMVMGVLNQAFDVLVLRYGVQKRVY 796
>gi|305855184|ref|NP_001182262.1| DIS3-like exonuclease 2 [Sus scrofa]
gi|285818458|gb|ADC38902.1| DIS3 mitotic control-like protein [Sus scrofa]
Length = 883
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 248/638 (38%), Positives = 342/638 (53%), Gaps = 75/638 (11%)
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 176
+ +VV I+E+ R GFL + A KN R+Y +P+ +
Sbjct: 232 SAKVVYILEKKHSR-AATGFLKLL------------ADKNSELF----RKYALFSPSDHR 274
Query: 177 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 236
P++ V +KD P R ++ T L RI +W E+S F + G+ GE+E
Sbjct: 275 VPRIYVPLKDCPQDFVTRPKDYANT----LFICRIVDWKEDSNFALGQLAKSLGQAGEIE 330
Query: 237 PQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
P+ IL E + S F E L CLP +PW +P EE R+DLR CIFTIDPSTA DL
Sbjct: 331 PETEGILTEYGVDFSDFPSEVLECLPHGLPWTIPPEEFRKRRDLRKDCIFTIDPSTARDL 390
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS + L+DG VGVHIADVSYFV G++LD A R+TSVY++Q+ +PMLP LL E
Sbjct: 391 DDALSCKSLADGNFEVGVHIADVSYFVPEGSSLDSVAAERATSVYLVQKVVPMLPRLLCE 450
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
E+ SLNP D+L FS+ W L G ++ W GRTVIRSC KLSYEHAQ +I+
Sbjct: 451 ELCSLNPMTDKLTFSVIWTLTPRGKILSEWFGRTVIRSCTKLSYEHAQSMIESPTRKIPE 510
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
L P+ G+ +V R++ +L+ ++K L+ +RF DGALRL+ + F D E G
Sbjct: 511 KELPPISPEHSGE----EVHRAVLTLHGIAKELRKQRFADGALRLDQLRLAFTLDRETGL 566
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + D N L EEFMLLAN A I RAFP+ ALLRRHP P + L + FC
Sbjct: 567 PQGCHIYEYRDSNKLVEEFMLLANMAVAREIHRAFPERALLRRHPPPQTKMLNDLMEFCE 626
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
+ GL +D SS+G ++SL + K ++L N +RPMQ+A YFC+G +D +
Sbjct: 627 QLGLPMDFSSAGALNKSLTETFGDDKYSLARKEVLTNMCSRPMQMALYFCAGTLRDPAQF 686
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HYAL P+YTHFTSP+RR+ D++VHR L AAL Y + M P
Sbjct: 687 RHYALNVPLYTHFTSPIRRFADVMVHRLLAAALG----YREPPDMEP------------- 729
Query: 655 TGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYM 714
++L A HCNDR++A + V++ L+
Sbjct: 730 -------------------------------NVLQKRADHCNDRRMASKRVQELSTGLFF 758
Query: 715 WILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
IL+K+ L SEA VL + + + + + +++RIY
Sbjct: 759 AILVKESGPLESEAMVLGVLNQAFDVLVLRYGVQKRIY 796
>gi|363737173|ref|XP_422741.3| PREDICTED: DIS3-like exonuclease 2-like [Gallus gallus]
Length = 864
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 248/638 (38%), Positives = 344/638 (53%), Gaps = 75/638 (11%)
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 176
T +VV I+E+ R GF+ + A KN ++ +P +
Sbjct: 232 TAKVVYILEKKHSR-AATGFIKLL------------ADKNSELF----KKCAMFSPVDHR 274
Query: 177 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 236
P+ V + D P R E+ L RI +W E+S F + G+ GE+E
Sbjct: 275 VPRAYVSLADCPSDFVARPEDYSNM----LFICRIVDWKEDSNFASGQLAKSLGQAGEIE 330
Query: 237 PQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
P+ IL E + S FSPE+L CLP +PW + E+ R+DLR CIFTIDPSTA DL
Sbjct: 331 PETEGILTEYGVDFSDFSPEALECLPQGLPWVISPGEMAKRRDLRKECIFTIDPSTAKDL 390
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS ++L DG VGVHIADVSYFVL TALD A R+TSVY++Q+ IPMLP LL E
Sbjct: 391 DDALSCKQLPDGNFEVGVHIADVSYFVLEETALDRVASERATSVYLVQKVIPMLPKLLCE 450
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
E+ SLNP DRL FS+ W + G ++D W GRTVI SC KLSY+HAQ +I+ V S
Sbjct: 451 ELCSLNPMRDRLTFSVMWKVTPEGKILDEWFGRTVICSCAKLSYDHAQSMIENPGKVFSP 510
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
L P + Q +++ +++ +L+ +++ L+ +RF DGALRL+ K F D E G
Sbjct: 511 EEL----PPISPQHSVAEIQQAVLNLHHIARHLRKQRFIDGALRLDQLKLSFTLDQESGM 566
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + D N L EEFMLLAN A I R+FP+ ALLRRHP P + L + FC
Sbjct: 567 PQGCYIYQYRDSNKLVEEFMLLANMAVAHQIYRSFPEQALLRRHPPPQSKLLNDLMEFCH 626
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
+ GL++D SS+G H+SL + K ++L N +RPMQ+A YFC+G KD+T +
Sbjct: 627 QVGLEIDFSSAGSLHKSLNETFGADKYSEARKEVLTNMFSRPMQMALYFCTGVLKDETLF 686
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HYAL P YTHFTSP+RRY D+VVHR L+A+L G+
Sbjct: 687 RHYALNVPFYTHFTSPIRRYADVVVHRLLSASL--------------------GIS---- 722
Query: 655 TGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYM 714
+ I +K+A + A HCNDRK+A + V++ L+
Sbjct: 723 SPIKMEKEAIQ------------------------RQAEHCNDRKMASKRVQELSTDLFF 758
Query: 715 WILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
+ +++ L SEA V+ + + + K +++RIY
Sbjct: 759 AVFVRECGPLESEAMVMGVLNEAFDVLVLKFGVQKRIY 796
>gi|73994138|ref|XP_852722.1| PREDICTED: DIS3 mitotic control homolog (S. cerevisiae)-like 2
[Canis lupus familiaris]
Length = 879
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 267/739 (36%), Positives = 378/739 (51%), Gaps = 97/739 (13%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLS------------AMISSYPTKRPTGRVVSIIERSPRR 130
SDS E SS QN ++ +++LS A+++ + + + E+S +R
Sbjct: 171 SDS-EDGHSSTQNVLVDGVKKLSVCVHDKGKEDADALVTKEESTSTSQDTRASPEKSLQR 229
Query: 131 DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDS 190
V +++ + G K S L R+Y +P+ + P++ V +KD P
Sbjct: 230 SAKVVYISEKKHSRAATGFLKLLADKNSELF---RKYALFSPSDHRVPRIYVPLKDCPQD 286
Query: 191 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 250
R ++ T L RI +W E+S F + G+ GE+EP+ IL E +
Sbjct: 287 FVTRPKDYANT----LFICRIVDWKEDSNFALGQLAKSLGQAGEIEPETEGILTEYGVDF 342
Query: 251 SGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 309
S FS E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG
Sbjct: 343 SDFSSEVLDCLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNF 402
Query: 310 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 369
VGVHIADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SL+P D+L F
Sbjct: 403 EVGVHIADVSYFVPEGSPLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLHPMSDKLTF 462
Query: 370 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 429
S+ W L G ++ W GRT+IRSC KLSYEHAQ +I+ + E P + +
Sbjct: 463 SVIWTLTPEGKILGEWFGRTIIRSCTKLSYEHAQSMIESP----TEKIPEEELPPISPEH 518
Query: 430 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNF 488
+V R++ +L++++K L+ +RF DGALRL+ K F D E G P + D N
Sbjct: 519 TSEEVHRAVLNLHKIAKELRKQRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNK 578
Query: 489 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 548
L EEFMLLAN A R FP+ ALLRRHP P + L + FC + GL +D SS+G
Sbjct: 579 LVEEFMLLANMAVAHKTHRTFPERALLRRHPPPQTKMLNDLMEFCDQMGLPMDFSSAGAL 638
Query: 549 HQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 608
++SL + K ++L N +RPMQ+A YFCSG +D + HYAL P+YTHFT
Sbjct: 639 NKSLTETFGDDKYSLARKEVLTNMCSRPMQMALYFCSGVLQDQAQFRHYALNVPLYTHFT 698
Query: 609 SPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLE 668
SP+RR+ D++VHR L AAL R LP
Sbjct: 699 SPIRRFADVLVHRLLAAAL--------GYRELPDME------------------------ 726
Query: 669 GREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEA 728
D L A HCNDR++A + V++ L+ IL+K+ L SEA
Sbjct: 727 ----------------PDTLQKQADHCNDRRMASKRVQELSTGLFFAILVKESGPLESEA 770
Query: 729 RVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVLSLCAHKRSFKRGGPGN 788
VL + + + + + +++RIY + L L +H F+R G
Sbjct: 771 MVLGVLNQAFDVLVLRYGVQKRIYCN----------------ALPLRSHH--FQRVGKK- 811
Query: 789 YRALEEVALVVRPNDLKEE 807
E+ LV P D+++E
Sbjct: 812 ----PELTLVWEPEDMEQE 826
>gi|300795442|ref|NP_001179435.1| DIS3-like exonuclease 2 [Bos taurus]
gi|296490216|tpg|DAA32329.1| TPA: DIS3 mitotic control homolog-like 2 [Bos taurus]
Length = 882
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 259/693 (37%), Positives = 360/693 (51%), Gaps = 98/693 (14%)
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 176
+ +VV I+E+ R GFL + A KN R+Y +P+ +
Sbjct: 232 SAKVVYILEKKHSR-AATGFLKLL------------ADKNSELF----RKYALFSPSDHR 274
Query: 177 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 236
P++ V +KD P R ++ T L RI +W E+S F + G+ GE+E
Sbjct: 275 VPRIYVPLKDCPQDFVTRPKDYANT----LFICRIMDWKEDSNFALGQLAKSLGQAGEIE 330
Query: 237 PQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
P+ IL E + S FS E L CLP +PW +P EE R+DLR CIFTIDPSTA DL
Sbjct: 331 PETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEFSRRRDLRKDCIFTIDPSTARDL 390
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS + L+DG VGVHIADVSYFV G++LD A R+TSVY++Q+ +PMLP LL E
Sbjct: 391 DDALSCKSLADGNFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQKVVPMLPRLLCE 450
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
E+ SLNP D+L FS+ W L G ++ W GRT+IRSC KLSYEHAQ +I+
Sbjct: 451 ELCSLNPMTDKLTFSVIWTLTPKGKILAEWFGRTIIRSCTKLSYEHAQSMIESPTRRIPE 510
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
L P + + +V R++ +L+ V+K L+ +RF DGALRL+ K F D E G
Sbjct: 511 REL----PAISPEHTCDEVHRAVLNLHGVAKELRRQRFADGALRLDQLKLAFTLDHETGL 566
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + D N L EEFMLLAN A I RAFP+ ALLRRHP P + L + FC
Sbjct: 567 PQGCHVYEYRDSNKLVEEFMLLANMAVAHKIHRAFPEQALLRRHPPPQTKMLNDLVEFCD 626
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
+ GL +D SS+G ++SL + K ++L N +RPMQ+A YFCSG +D +
Sbjct: 627 QMGLPMDFSSAGALNKSLTEMFGDDKYSLARKEVLTNMCSRPMQMAVYFCSGALRDPAQF 686
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HYAL P+YTHFTSP+RR+ D++VHR L +AL R LP
Sbjct: 687 RHYALNVPLYTHFTSPIRRFADVLVHRLLASAL--------GYRELPDVE---------- 728
Query: 655 TGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYM 714
D L A HCNDR++A + V++ L+
Sbjct: 729 ------------------------------PDSLQKQADHCNDRRMASKRVQELSTGLFF 758
Query: 715 WILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVLSL 774
IL+++ L SEA V+ + + + + + +++R+Y + +L L
Sbjct: 759 AILVRESGPLESEAMVMGVLNQAFDVLVLRYGVQKRVYCN----------------MLPL 802
Query: 775 CAHKRSFKRGGPGNYRALEEVALVVRPNDLKEE 807
+H F++ G E+ LV P DL++E
Sbjct: 803 RSHH--FQKVGKK-----PELTLVWEPEDLEQE 828
>gi|348577383|ref|XP_003474464.1| PREDICTED: DIS3-like exonuclease 2-like [Cavia porcellus]
Length = 875
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/630 (37%), Positives = 339/630 (53%), Gaps = 61/630 (9%)
Query: 125 ERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLV 184
E+SP++ V ++ + G K + S L R+Y +P+ + P++ V +
Sbjct: 224 EKSPQKSAKVVYILEKKHSRAATGVLKLLAEKNSDLF---RKYALFSPSDHRVPRIYVPL 280
Query: 185 KDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILY 244
KD P R ++ +T L I +W E+ F + G+ GE+EP+ IL
Sbjct: 281 KDCPQDFMTRPKDYAST----LFICHIVDWKEDCNFALGKLAKSLGQAGEIEPETEGILT 336
Query: 245 ENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIER 303
E + S FS E L CLP +PW +P EE+ R+DLR C+FTIDP TA DLDDALS
Sbjct: 337 EYGVDFSDFSSEVLECLPRSLPWTIPPEEVSKRRDLRKDCVFTIDPPTARDLDDALSCRP 396
Query: 304 LSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPG 363
L+DG +VGVHIADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP
Sbjct: 397 LADGTFQVGVHIADVSYFVPQGSQLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPM 456
Query: 364 VDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP 423
D+L FS+ W L S G ++D W GRT+IRSC KLSYEHAQ +I+ + L P
Sbjct: 457 TDKLTFSVIWTLTSEGKILDEWFGRTIIRSCTKLSYEHAQSMIERPAEKIPEREL----P 512
Query: 424 QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSG 482
+ + ++ +++ +L+ ++K L+ +RF +GALRL+ K F D E G P +
Sbjct: 513 PISPEHSPEELHQAVLNLHRIAKQLRRQRFANGALRLDQLKLAFTLDHETGLPQGCHIYE 572
Query: 483 REDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDT 542
D N L EEFMLLAN A I AFP+ ALLRRHP P + L + FC + GL +D
Sbjct: 573 YHDSNKLVEEFMLLANMAVAHKIHGAFPEQALLRRHPPPQTKMLGDLVEFCDQMGLAVDV 632
Query: 543 SSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFP 602
SS+G H+SL + K ++L N +RPMQ+A YFCSG +D + HYAL P
Sbjct: 633 SSAGALHKSLTKIFGDDKYSLARKEVLTNMFSRPMQMALYFCSGVLRDQAQFQHYALNVP 692
Query: 603 VYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKD 662
+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 693 LYTHFTSPIRRFADVLVHRLLAAAL----------------------------------G 718
Query: 663 AAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKE 722
+ LE D L A HCNDR++A + V++ L+ IL+K+
Sbjct: 719 CGQQLEVE--------------PDALQKQADHCNDRRMASKRVQELSTALFFGILVKESG 764
Query: 723 VLLSEARVLALGPRFMTIYIEKLAIERRIY 752
L SEA V+ + + + + + +++R+Y
Sbjct: 765 PLESEAMVMGVLNQAFDVLVLRFGVQKRVY 794
>gi|440896732|gb|ELR48582.1| DIS3-like exonuclease 2, partial [Bos grunniens mutus]
Length = 871
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 247/638 (38%), Positives = 340/638 (53%), Gaps = 75/638 (11%)
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 176
+ +VV I+E+ R GFL + A KN R+Y +P+ +
Sbjct: 232 SAKVVYILEKKHSR-AATGFLKLL------------ADKNSELF----RKYALFSPSDHR 274
Query: 177 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 236
P++ V +KD P R ++ T L RI +W E+S F + G+ GE+E
Sbjct: 275 VPRIYVPLKDCPQDFVTRPKDYANT----LFICRIMDWKEDSNFALGQLAKSLGQAGEIE 330
Query: 237 PQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
P+ IL E + S FS E L CLP +PW +P EE R+DLR CIFTIDPSTA DL
Sbjct: 331 PETEGILTEYGVDFSDFSSEVLECLPQGLPWTIPPEEFRRRRDLRKDCIFTIDPSTARDL 390
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS + L+DG VGVHIADVSYFV G++LD A R+TSVY++Q+ +PMLP LL E
Sbjct: 391 DDALSCKSLADGNFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQKVVPMLPRLLCE 450
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
E+ SLNP D+L FS+ W L G ++ W GRT+IRSC KLSYEHAQ +I+
Sbjct: 451 ELCSLNPMTDKLTFSVIWTLTPKGKILAEWFGRTIIRSCTKLSYEHAQSMIESPTRRIPE 510
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
L P + + +V R++ +L+ V+K L+ +RF DGALRL+ K F D E G
Sbjct: 511 REL----PAISPEHTCDEVHRAVLNLHGVAKELRRQRFADGALRLDQLKLAFTLDHETGL 566
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + D N L EEFMLLAN A I RAFP+ ALLRRHP P + L + FC
Sbjct: 567 PQGCHVYEYRDSNKLVEEFMLLANMAVAHKIHRAFPEQALLRRHPPPQTKMLNDLVEFCD 626
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
+ GL +D SS+G ++SL + K ++L N +RPMQ+A YFCSG +D +
Sbjct: 627 QMGLPMDFSSAGALNKSLTEMFGDDKYSLARKEVLTNMCSRPMQMAVYFCSGALRDPAQF 686
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HYAL P+YTHFTSP+RR+ D++VHR L +AL R LP
Sbjct: 687 RHYALNVPLYTHFTSPIRRFADVLVHRLLASAL--------GYRELPDVE---------- 728
Query: 655 TGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYM 714
D L A HCNDR++A + V++ L+
Sbjct: 729 ------------------------------PDSLQKQADHCNDRRMASKRVQELSTGLFF 758
Query: 715 WILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
IL+++ L SEA V+ + + + + + +++R+Y
Sbjct: 759 AILVRESGPLESEAMVMGVLNQAFDVLVLRYGVQKRVY 796
>gi|148708248|gb|EDL40195.1| RIKEN cDNA 4930429A22, isoform CRA_a [Mus musculus]
Length = 630
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 241/645 (37%), Positives = 344/645 (53%), Gaps = 81/645 (12%)
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
++Y +P+ + P++ V +KD P R ++ T L RI +W E+ F
Sbjct: 54 KKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDFANT----LFICRIIDWKEDCNFALGQ 109
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFC 283
+ G+ GE+EP+ IL E + S FS E L CLP +PW +P +E+ R+DLR C
Sbjct: 110 LAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPDEVGKRRDLRKDC 169
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
IFTIDPSTA DLDDAL+ RL+DG VGVHIADVSYFV G++LD A R+TSVY++Q
Sbjct: 170 IFTIDPSTARDLDDALACRRLTDGTFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQ 229
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W GRT+IRSC KLSY+HAQ
Sbjct: 230 KVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTIIRSCTKLSYDHAQ 289
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+I+ + E P + + +V +++ +L+ ++K L+ +RF DGALRL+
Sbjct: 290 SMIENP----TEKIPEEELPPISPEHSVEEVHQAVLNLHSIAKQLRRQRFVDGALRLDQL 345
Query: 464 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
K F D E G P + D N L EEFMLLAN A I R FP+ ALLRRHP P
Sbjct: 346 KLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTFPEQALLRRHPPPQ 405
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
+ L + FC + GL +D SS+G ++SL + K ++L N +RPMQ+A Y
Sbjct: 406 TKMLSDLVEFCDQMGLPMDVSSAGALNKSLTKTFGDDKYSLARKEVLTNMYSRPMQMALY 465
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPK 642
FCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L
Sbjct: 466 FCSGMLQDQEQFRHYALNVPLYTHFTSPIRRFADVIVHRLL------------------- 506
Query: 643 NNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLAC 702
A +L E V D L A HCNDR++A
Sbjct: 507 ---------------------AAALGYSEQPDVEP--------DTLQKQADHCNDRRMAS 537
Query: 703 RNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVE 762
+ V++ + L+ +L+K+ L SEA V+ + + + + + +++RIY +
Sbjct: 538 KRVQELSIGLFFAVLVKESGPLESEAMVMGVLNQAFDVLVLRFGVQKRIYCN-------- 589
Query: 763 WLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPNDLKEE 807
+L SF++ G E+ LV P+DL+EE
Sbjct: 590 ----------ALALRSYSFQKVGKK-----PELTLVWEPDDLEEE 619
>gi|149016360|gb|EDL75606.1| similar to RIKEN cDNA 4930429A22 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 650
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 242/645 (37%), Positives = 342/645 (53%), Gaps = 81/645 (12%)
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
++Y +P+ + P++ V +KD P R ++ T L RI +W E+ F
Sbjct: 74 KKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDYANT----LFICRIIDWKEDCNFALGQ 129
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFC 283
+ G+ GE+EP+ IL E + S FS E L CLP +PW +P EE+ R+DLR C
Sbjct: 130 LAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPEEVGKRRDLRKDC 189
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
IFTIDPSTA DLDDALS +L+DG VGVHIADVSYFV G++LD A R+TSVY++Q
Sbjct: 190 IFTIDPSTARDLDDALSCRQLTDGTFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQ 249
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W GRT+IRSC KLSY+HAQ
Sbjct: 250 KVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTIIRSCTKLSYDHAQ 309
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+I+ + E P + + +V +++ +L+ ++K L+ +RF DGALRL+
Sbjct: 310 SMIENP----TEKIPKEELPPISPEHSIEEVHQAVLNLHSIAKQLRRQRFVDGALRLDQL 365
Query: 464 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
K F D E G P + D N L EEFMLLAN A I R FP+ ALLRRHP P
Sbjct: 366 KLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTFPEQALLRRHPPPQ 425
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
+ L + FC + GL +D SS+G ++SL K ++L N +RPMQ+A Y
Sbjct: 426 TKMLSDLVEFCDQMGLPMDVSSAGALNKSLTNTFGDDKYSLARKEVLTNMYSRPMQMALY 485
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPK 642
FCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L
Sbjct: 486 FCSGMLQDQAQFRHYALNVPLYTHFTSPIRRFADVIVHRLL------------------- 526
Query: 643 NNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLAC 702
A +L E V D L A HCNDR++A
Sbjct: 527 ---------------------AAALGYSEQPDVEP--------DALQKQADHCNDRRMAS 557
Query: 703 RNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVE 762
+ V++ + L+ IL+K+ L SEA V+ + + + + + +++RIY +
Sbjct: 558 KRVQELSIGLFFSILVKESGPLESEAMVMGVLNQAFDVLVLRFGVQKRIYCN-------- 609
Query: 763 WLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPNDLKEE 807
+L F++ G E+ LV P+DL+EE
Sbjct: 610 ----------ALALRSYHFQKVGKK-----PELTLVWEPDDLEEE 639
>gi|118404918|ref|NP_001072804.1| DIS3-like exonuclease 2 [Xenopus (Silurana) tropicalis]
gi|123911962|sp|Q0V9R3.1|DI3L2_XENTR RecName: Full=DIS3-like exonuclease 2
gi|111307895|gb|AAI21426.1| DIS3 mitotic control homolog-like 2 [Xenopus (Silurana) tropicalis]
Length = 834
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 243/641 (37%), Positives = 340/641 (53%), Gaps = 81/641 (12%)
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 176
T +VV I+E+ R GF+ K S L+ R+ +P +
Sbjct: 203 TAKVVYILEKKHSR-AATGFI-------------KPLSDKSSDLA---RKRALFSPVDHR 245
Query: 177 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 236
P++ V + D P E T L I W ++S F + ++ G+ GE+E
Sbjct: 246 LPRIYVPLGDCPHDFAIHPE----TYANTLFICSITAWRDDSNFAEGKLMKSLGQAGEIE 301
Query: 237 PQINAILYENAICCSGFSPESLSCLPC-VPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
P+ IL E + S F + L CLP +PW +PQEE RKDLRN CIFTIDP+TA DL
Sbjct: 302 PETEGILVEYGVDFSDFPDKVLQCLPQDLPWTIPQEEFQKRKDLRNECIFTIDPATARDL 361
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS + L DG VGVHIADVSYFV G+ALDI A R+TSVY++Q+ IPMLP LL E
Sbjct: 362 DDALSCKPLPDGNFEVGVHIADVSYFVAEGSALDIMASERATSVYLVQKVIPMLPRLLCE 421
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
E+ SLNP DRL FS+ W + G+++D W GR+VI SC KLSY+HAQ++I+
Sbjct: 422 ELCSLNPMTDRLTFSVIWKITPQGEILDEWFGRSVICSCVKLSYDHAQNMINHPDKKIEQ 481
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
+ L P + Q +++ +++ +L+ +++ L+ +RF DGALRL+ K F D E G
Sbjct: 482 HEL----PPVSPQHTINEIHQAVLNLHLIAQNLRKQRFDDGALRLDQLKLTFTLDKESGL 537
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + D N L EEFMLLAN A I R FP+ ALLRRHP P + L + FC
Sbjct: 538 PQGCYIYQYRDSNKLVEEFMLLANMAVAHHIYRRFPEEALLRRHPPPQTKMLNDLIEFCD 597
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
+ GLQLD +SSG H+SL E + ++L N +RPMQ+A YFC+G KD+T +
Sbjct: 598 QMGLQLDFTSSGTLHKSLNDQFETDEYSAARKEVLTNMCSRPMQMAVYFCTGALKDETLF 657
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HYAL P+YTHFTSP+RR+ D++VHR
Sbjct: 658 HHYALNVPLYTHFTSPIRRFADVIVHR--------------------------------- 684
Query: 655 TGIFYDKDAAESLEGREALSVAALKYGVPCA---DILVNVATHCNDRKLACRNVKDACVK 711
L A+L G P +++ A HCNDRK A + V++ +
Sbjct: 685 ------------------LLAASLGCGPPLKMPKEVIQKQADHCNDRKTASKRVQELSAE 726
Query: 712 LYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
L+ + +K+ L SEA V+ + + + + +++RIY
Sbjct: 727 LFFSVFVKECGPLESEAMVMGVLNEAFDVIVLRFGVQKRIY 767
>gi|354497262|ref|XP_003510740.1| PREDICTED: DIS3-like exonuclease 2 isoform 1 [Cricetulus griseus]
gi|344252915|gb|EGW09019.1| DIS3-like exonuclease 2 [Cricetulus griseus]
Length = 876
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 260/741 (35%), Positives = 380/741 (51%), Gaps = 105/741 (14%)
Query: 33 KVDVSYEYSNCTLL--SEKGIHH---------DDDSSSEAYNQEMIEREGYNYINGHHP- 80
+ D+S EY LL S KG + DD S + + + +G ++ H P
Sbjct: 138 EADISEEYCGQHLLQQSPKGCNSPDVIIEAQFDDSDSEDRHGNTSVLVDGVKELSLHTPD 197
Query: 81 -----STSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGI 133
S++ T++ ++S D E+ + + + +VV I+E+ R GI
Sbjct: 198 KGKEESSAPVTKEENTSTSQDTRALPEK---------SLQKSAKVVYILEKKHSRAATGI 248
Query: 134 VGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKK 193
+ L A KN ++Y +P+ + P++ V +KD P
Sbjct: 249 LKLL---------------ADKNSDLF----KKYALFSPSDHRVPRIYVPLKDCPQDFIT 289
Query: 194 RLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGF 253
R ++ T L RI +W E+ F + G+ GE+EP+ IL E + S F
Sbjct: 290 RPKDYTNT----LFICRIIDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDF 345
Query: 254 SPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
S E L CLP +PW +P +EL R+DLR CIFTIDPSTA DLDDALS L+DG VG
Sbjct: 346 SSEVLECLPQSLPWTIPPDELGKRRDLRKDCIFTIDPSTARDLDDALSCRPLTDGTFEVG 405
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVSYFV G++L++ A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+
Sbjct: 406 VHIADVSYFVPEGSSLNMVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVI 465
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W L G +++ W GRTVIRSC KLSY+HAQ +I+ + E P + +
Sbjct: 466 WKLTPEGKILEEWFGRTVIRSCTKLSYDHAQSMIENP----TEKLPEEELPPVSPEHSSE 521
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFE 491
+V +++ +L+ ++K L+ +RF DGALRL+ K F D E G P + D N L E
Sbjct: 522 EVHQAVLNLHSIAKQLRQQRFVDGALRLDQLKLAFTLDHETGMPQGCHIYEYRDSNKLVE 581
Query: 492 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 551
EFMLLAN A I R FP+ ALLRRHP P + L + FC + GL +D SS+G ++S
Sbjct: 582 EFMLLANMAVAHKIFRTFPEQALLRRHPPPQTKMLSDLVEFCDQMGLPMDVSSAGALNKS 641
Query: 552 LEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 611
L + K ++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+
Sbjct: 642 LTKTFGDDKYSLARKEVLTNMYSRPMQMALYFCSGMLQDQAQFRHYALNVPLYTHFTSPI 701
Query: 612 RRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGRE 671
RR+ D++VH R+L A +L E
Sbjct: 702 RRFADVIVH-----------------RLL-----------------------AAALGYSE 721
Query: 672 ALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVL 731
V D L A HCNDR++A + V++ + L+ +L+++ L SEA V+
Sbjct: 722 RPDVEP--------DTLQKQADHCNDRRMASKRVQELSIGLFFAVLVRESGPLESEAMVM 773
Query: 732 ALGPRFMTIYIEKLAIERRIY 752
+ + + + + +++RIY
Sbjct: 774 GVLNQAFDVLVLRFGVQKRIY 794
>gi|354497264|ref|XP_003510741.1| PREDICTED: DIS3-like exonuclease 2 isoform 2 [Cricetulus griseus]
Length = 890
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 260/741 (35%), Positives = 380/741 (51%), Gaps = 105/741 (14%)
Query: 33 KVDVSYEYSNCTLL--SEKGIHH---------DDDSSSEAYNQEMIEREGYNYINGHHP- 80
+ D+S EY LL S KG + DD S + + + +G ++ H P
Sbjct: 152 EADISEEYCGQHLLQQSPKGCNSPDVIIEAQFDDSDSEDRHGNTSVLVDGVKELSLHTPD 211
Query: 81 -----STSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRR--DGI 133
S++ T++ ++S D E+ + + + +VV I+E+ R GI
Sbjct: 212 KGKEESSAPVTKEENTSTSQDTRALPEK---------SLQKSAKVVYILEKKHSRAATGI 262
Query: 134 VGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKK 193
+ L A KN ++Y +P+ + P++ V +KD P
Sbjct: 263 LKLL---------------ADKNSDLF----KKYALFSPSDHRVPRIYVPLKDCPQDFIT 303
Query: 194 RLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGF 253
R ++ T L RI +W E+ F + G+ GE+EP+ IL E + S F
Sbjct: 304 RPKDYTNT----LFICRIIDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDF 359
Query: 254 SPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
S E L CLP +PW +P +EL R+DLR CIFTIDPSTA DLDDALS L+DG VG
Sbjct: 360 SSEVLECLPQSLPWTIPPDELGKRRDLRKDCIFTIDPSTARDLDDALSCRPLTDGTFEVG 419
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVSYFV G++L++ A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+
Sbjct: 420 VHIADVSYFVPEGSSLNMVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMTDKLTFSVI 479
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W L G +++ W GRTVIRSC KLSY+HAQ +I+ + E P + +
Sbjct: 480 WKLTPEGKILEEWFGRTVIRSCTKLSYDHAQSMIENP----TEKLPEEELPPVSPEHSSE 535
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFE 491
+V +++ +L+ ++K L+ +RF DGALRL+ K F D E G P + D N L E
Sbjct: 536 EVHQAVLNLHSIAKQLRQQRFVDGALRLDQLKLAFTLDHETGMPQGCHIYEYRDSNKLVE 595
Query: 492 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 551
EFMLLAN A I R FP+ ALLRRHP P + L + FC + GL +D SS+G ++S
Sbjct: 596 EFMLLANMAVAHKIFRTFPEQALLRRHPPPQTKMLSDLVEFCDQMGLPMDVSSAGALNKS 655
Query: 552 LEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 611
L + K ++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+
Sbjct: 656 LTKTFGDDKYSLARKEVLTNMYSRPMQMALYFCSGMLQDQAQFRHYALNVPLYTHFTSPI 715
Query: 612 RRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGRE 671
RR+ D++VH R+L A +L E
Sbjct: 716 RRFADVIVH-----------------RLL-----------------------AAALGYSE 735
Query: 672 ALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVL 731
V D L A HCNDR++A + V++ + L+ +L+++ L SEA V+
Sbjct: 736 RPDVEP--------DTLQKQADHCNDRRMASKRVQELSIGLFFAVLVRESGPLESEAMVM 787
Query: 732 ALGPRFMTIYIEKLAIERRIY 752
+ + + + + +++RIY
Sbjct: 788 GVLNQAFDVLVLRFGVQKRIY 808
>gi|410924896|ref|XP_003975917.1| PREDICTED: DIS3-like exonuclease 2-like [Takifugu rubripes]
Length = 999
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 239/646 (36%), Positives = 343/646 (53%), Gaps = 81/646 (12%)
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 176
T +VV I+E+ R GFL VP++ + +P +
Sbjct: 371 TAKVVYIVEKKHSR-AATGFLKF----------------------VPNKPFAMFSPVDHR 407
Query: 177 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 236
P++ V + D P+ + R + +T L RI W S F + ++ G+ GE+E
Sbjct: 408 VPRINVPLADCPEDFRCRAGDYAST----LYICRITNWEANSNFAEGRLMKTLGQAGEIE 463
Query: 237 PQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
P+ IL E + S FS E L CLP +PW +P EE+ RKDLR CIFTIDP+TA DL
Sbjct: 464 PETEGILLEYEVDFSEFSDEVLECLPKNLPWSIPPEEIRKRKDLREECIFTIDPATARDL 523
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS +RL DG VGVHIADVSYFV G ALDI A R+TSVY++Q+ IPMLP LL E
Sbjct: 524 DDALSCKRLPDGNFEVGVHIADVSYFVEEGGALDIIASQRATSVYLVQKVIPMLPRLLCE 583
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
E+ SLNP DRL S+ W + G ++ W GRT+IRSC KLSY+HAQ +I+ + S+
Sbjct: 584 ELCSLNPLSDRLTLSVIWKVTPEGKILSEWFGRTIIRSCVKLSYDHAQSMIEAPEKMFSA 643
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
L P + + ++ +++ L+ ++K L+ +RFT GALRL+ K F D E
Sbjct: 644 GEL----PPMDPEHPIDEIHQAVLDLHAIAKNLRAQRFTGGALRLDQLKLAFTLDKESMM 699
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + D N L EEFMLLAN A I FP+ ALLRRHP P ++ + E + FC
Sbjct: 700 PQGCFVYQYRDSNKLVEEFMLLANIATANHIYARFPEVALLRRHPPPKIKMVDELQEFCD 759
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
+ G+ +D SS+G H+S+ K ++L + +RPMQ+A YFC+G F +T++
Sbjct: 760 QLGIDIDLSSAGALHRSIHATFGDDKYSSARKEVLTHMCSRPMQMALYFCTGAFNKETNF 819
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HYAL P+YTHFTSP+RRY D++VHR L A
Sbjct: 820 KHYALNVPLYTHFTSPIRRYADVIVHRLLVA----------------------------- 850
Query: 655 TGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYM 714
SL+ S+A D + A+HCND+K + V++ +L+
Sbjct: 851 -----------SLKCGPNFSLAT--------DQVQKQASHCNDKKKVSKRVQELSSELFF 891
Query: 715 WILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLI 760
+ +K+ L SEA V+ + + + + + +++RIY + GL+
Sbjct: 892 GVFVKECGPLDSEAMVMGVLDQSFDVLVLRYGVQKRIYCKLIPGLV 937
>gi|301765188|ref|XP_002918016.1| PREDICTED: DIS3-like exonuclease 2-like [Ailuropoda melanoleuca]
Length = 881
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 246/641 (38%), Positives = 339/641 (52%), Gaps = 81/641 (12%)
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 176
+ +VV I+E+ R GFL + A KN R+Y +P+ +
Sbjct: 232 SAKVVYILEKKHSR-AATGFLKLL------------ADKNSELF----RKYALFSPSDHR 274
Query: 177 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 236
P++ V +KD P R ++ T L RI +W E+S F + G+ GE+E
Sbjct: 275 VPRIYVPLKDCPQDFVTRPKDYANT----LFICRIVDWKEDSNFALGQLAKSLGQAGEIE 330
Query: 237 PQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
P+ IL E + S FS E L CLP +PW +P EE R+DLR CIFTIDPSTA DL
Sbjct: 331 PETEGILTEYGVDFSDFSSEVLDCLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDL 390
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS + L+DG VGVHIADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL E
Sbjct: 391 DDALSCKPLADGNFEVGVHIADVSYFVPEGSPLDKVAAERATSVYLVQKVVPMLPRLLCE 450
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
E+ SL+P D+L FS+ W L G ++ W GRTVIRSC KLSYEHAQ +I+ +
Sbjct: 451 ELCSLHPMTDKLTFSVIWTLTPEGKILREWFGRTVIRSCTKLSYEHAQSMIESPTEKIPE 510
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
L P + + +V R++ +L+ ++K L+ +RF DGALRL+ K F D E G
Sbjct: 511 KEL----PPISPEHTSEEVHRAVLNLHGIAKELRKQRFVDGALRLDQLKLAFTLDHETGL 566
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + D N L EEFMLLAN A R FP+ LLRRHP P + L + FC
Sbjct: 567 PQGCHIYEYRDSNKLVEEFMLLANMAVAHKTHRTFPERTLLRRHPPPQTKMLNDLVEFCE 626
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
+ GL +D SS+G ++SL + K ++L N +RPMQ+A YFCSG +D T +
Sbjct: 627 QMGLPMDFSSAGALNKSLTETFGDDKYSLARKEVLTNMCSRPMQMALYFCSGVLQDQTQF 686
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HYAL P+YTHFTSP+RR+ D++VHR L
Sbjct: 687 RHYALNVPLYTHFTSPIRRFADVLVHRLL------------------------------- 715
Query: 655 TGIFYDKDAAESLEGREALSVAALKYG-VPC--ADILVNVATHCNDRKLACRNVKDACVK 711
AAL YG +P + L A HCNDR++A + V++
Sbjct: 716 --------------------AAALGYGELPDLEPEALQKQADHCNDRRMASKRVQELSTG 755
Query: 712 LYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
L+ IL+K+ L SEA VL + + + + + +++R+Y
Sbjct: 756 LFFAILVKESGPLESEAMVLGVLNQAFDVLVLRYGVQKRVY 796
>gi|281345079|gb|EFB20663.1| hypothetical protein PANDA_006391 [Ailuropoda melanoleuca]
Length = 863
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 246/641 (38%), Positives = 339/641 (52%), Gaps = 81/641 (12%)
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 176
+ +VV I+E+ R GFL + A KN R+Y +P+ +
Sbjct: 215 SAKVVYILEKKHSR-AATGFLKLL------------ADKNSELF----RKYALFSPSDHR 257
Query: 177 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 236
P++ V +KD P R ++ T L RI +W E+S F + G+ GE+E
Sbjct: 258 VPRIYVPLKDCPQDFVTRPKDYANT----LFICRIVDWKEDSNFALGQLAKSLGQAGEIE 313
Query: 237 PQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
P+ IL E + S FS E L CLP +PW +P EE R+DLR CIFTIDPSTA DL
Sbjct: 314 PETEGILTEYGVDFSDFSSEVLDCLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDL 373
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS + L+DG VGVHIADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL E
Sbjct: 374 DDALSCKPLADGNFEVGVHIADVSYFVPEGSPLDKVAAERATSVYLVQKVVPMLPRLLCE 433
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
E+ SL+P D+L FS+ W L G ++ W GRTVIRSC KLSYEHAQ +I+ +
Sbjct: 434 ELCSLHPMTDKLTFSVIWTLTPEGKILREWFGRTVIRSCTKLSYEHAQSMIESPTEKIPE 493
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
L P + + +V R++ +L+ ++K L+ +RF DGALRL+ K F D E G
Sbjct: 494 KEL----PPISPEHTSEEVHRAVLNLHGIAKELRKQRFVDGALRLDQLKLAFTLDHETGL 549
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + D N L EEFMLLAN A R FP+ LLRRHP P + L + FC
Sbjct: 550 PQGCHIYEYRDSNKLVEEFMLLANMAVAHKTHRTFPERTLLRRHPPPQTKMLNDLVEFCE 609
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
+ GL +D SS+G ++SL + K ++L N +RPMQ+A YFCSG +D T +
Sbjct: 610 QMGLPMDFSSAGALNKSLTETFGDDKYSLARKEVLTNMCSRPMQMALYFCSGVLQDQTQF 669
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HYAL P+YTHFTSP+RR+ D++VHR L
Sbjct: 670 RHYALNVPLYTHFTSPIRRFADVLVHRLL------------------------------- 698
Query: 655 TGIFYDKDAAESLEGREALSVAALKYG-VPC--ADILVNVATHCNDRKLACRNVKDACVK 711
AAL YG +P + L A HCNDR++A + V++
Sbjct: 699 --------------------AAALGYGELPDLEPEALQKQADHCNDRRMASKRVQELSTG 738
Query: 712 LYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
L+ IL+K+ L SEA VL + + + + + +++R+Y
Sbjct: 739 LFFAILVKESGPLESEAMVLGVLNQAFDVLVLRYGVQKRVY 779
>gi|119591396|gb|EAW70990.1| hCG2013107, isoform CRA_e [Homo sapiens]
Length = 817
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 248/646 (38%), Positives = 339/646 (52%), Gaps = 88/646 (13%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDAPVTKDETTCISQDTRALSEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVH
Sbjct: 350 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+IRSC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 470 LTPEGKILDEWFGRTIIRSCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEV 525
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEF 493
+++ +L+ ++K L+ +RF DGALRL+ K F D E G P + + N L EEF
Sbjct: 526 HQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRESNKLVEEF 585
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
MLLAN A I RAFP+ ALLRRHP P R L + FC + GL +D SS+G ++SL
Sbjct: 586 MLLANMAVAHKIHRAFPEQALLRRHPPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSLT 645
Query: 554 QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
Q K ++L N +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+RR
Sbjct: 646 QTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFTSPIRR 705
Query: 614 YPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREAL 673
+ D++VHR L AAL RE L
Sbjct: 706 FADVLVHRLLAAALGY----------------------------------------RERL 725
Query: 674 SVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLK 719
+A D L A HCNDR++A + V++ L+ +L+K
Sbjct: 726 DMA--------PDTLQKQADHCNDRRMASKRVQELSTSLFFAVLVK 763
>gi|348531798|ref|XP_003453395.1| PREDICTED: DIS3-like exonuclease 2-like [Oreochromis niloticus]
Length = 1042
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/645 (37%), Positives = 347/645 (53%), Gaps = 81/645 (12%)
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 176
T +VV I+E+ R GFL +PD+ + +P +
Sbjct: 414 TAKVVYIVEKKHSR-AATGFLK----------------------HLPDKPFALFSPVDHR 450
Query: 177 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 236
P++ V + D P+ R GD L RI +W +S F + + G+ GE+E
Sbjct: 451 VPRINVPLADCPEDFSSR--PGD--YNNILFICRITDWAADSNFAEGRLAKSLGQAGEIE 506
Query: 237 PQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
P+ IL E + S FS E L CLP +PW +P EE+ R+DLRN CIFTIDP+TA DL
Sbjct: 507 PETEGILIEYEVDFSEFSDEVLDCLPKNLPWTIPPEEMRKRRDLRNECIFTIDPATARDL 566
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS ++L DG VGVHIADVSYFV G +LD+ A R+TSVY++Q+ IPMLP LL E
Sbjct: 567 DDALSCKQLPDGNFEVGVHIADVSYFVEEGNSLDVIASQRATSVYLVQKVIPMLPRLLCE 626
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
E+ SLNP VDRL FS+ W L G +++ W GR++IRSC KLSY+HAQ +I+ + S+
Sbjct: 627 ELCSLNPLVDRLTFSVIWTLTPEGKILNEWFGRSIIRSCVKLSYDHAQSMIEAPEKMFSA 686
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
L P + +V +++ +L+ ++K L+ +RF GALRL+ K F D E
Sbjct: 687 EEL----PPVDPMHPIDEVHQAVLNLHAIAKNLRAQRFLGGALRLDQLKLSFTLDKETMM 742
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + D N L EEFMLLAN A I R FP+ ALLRRHP P + + E + C
Sbjct: 743 PQGCYIYQYRDSNKLVEEFMLLANIATANHIYRKFPELALLRRHPPPKAKMMDELQELCD 802
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
+ G+++D SS+G H+SL A + ++L + +RPMQ+A YFC+G K++ ++
Sbjct: 803 QLGIKIDLSSAGLLHKSLNTAFGDDEYTSARKEVLTHMCSRPMQMALYFCTGVVKEEQNF 862
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HYAL P+YTHFTSP+RRY D++VHR L ++L+ G R
Sbjct: 863 KHYALNVPLYTHFTSPIRRYADIIVHRLLASSLKC------------------GPRISLS 904
Query: 655 TGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYM 714
T E +E + A+HCND+K + V++ +L+
Sbjct: 905 T---------EEVEKQ---------------------ASHCNDKKALSKRVQELSSELFF 934
Query: 715 WILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGL 759
+ +K+ L SEA V+ + + + + + +++RIY + GL
Sbjct: 935 GVFVKESGPLDSEAMVMGVLDQSFDVLVLRYGVQKRIYCKSITGL 979
>gi|288541380|ref|NP_001102477.2| DIS3 mitotic control homolog (S. cerevisiae)-like 2 isoform 1
[Rattus norvegicus]
gi|149016362|gb|EDL75608.1| similar to RIKEN cDNA 4930429A22 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 890
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 240/645 (37%), Positives = 341/645 (52%), Gaps = 81/645 (12%)
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
++Y +P+ + P++ V +KD P R ++ T L RI +W E+ F
Sbjct: 275 KKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDYANT----LFICRIIDWKEDCNFALGQ 330
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFC 283
+ G+ GE+EP+ IL E + S FS E L CLP +PW +P EE+ R+DLR C
Sbjct: 331 LAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPEEVGKRRDLRKDC 390
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
IFTIDPSTA DLDDALS +L+DG VGVHIADVSYFV G++LD A R+TSVY++Q
Sbjct: 391 IFTIDPSTARDLDDALSCRQLTDGTFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQ 450
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W GRT+IRSC KLSY+HAQ
Sbjct: 451 KVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTIIRSCTKLSYDHAQ 510
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+I+ + E P + + +V +++ +L+ ++K L+ +RF DGALRL+
Sbjct: 511 SMIENP----TEKIPKEELPPISPEHSIEEVHQAVLNLHSIAKQLRRQRFVDGALRLDQL 566
Query: 464 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
K F D E G P + D N L EEFMLLAN A I R FP+ ALLRRHP P
Sbjct: 567 KLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTFPEQALLRRHPPPQ 626
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
+ L + FC + GL +D SS+G ++SL K ++L N +RPMQ+A Y
Sbjct: 627 TKMLSDLVEFCDQMGLPMDVSSAGALNKSLTNTFGDDKYSLARKEVLTNMYSRPMQMALY 686
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPK 642
FCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL Y + + P
Sbjct: 687 FCSGMLQDQAQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAALG----YSEQPDVEPD 742
Query: 643 NNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLAC 702
A K C D R++A
Sbjct: 743 ---------------------------------ALQKQADHCND-----------RRMAS 758
Query: 703 RNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVE 762
+ V++ + L+ IL+K+ L SEA V+ + + + + + +++RIY +
Sbjct: 759 KRVQELSIGLFFSILVKESGPLESEAMVMGVLNQAFDVLVLRFGVQKRIYCN-------- 810
Query: 763 WLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPNDLKEE 807
+L F++ G E+ LV P+DL+EE
Sbjct: 811 ----------ALALRSYHFQKVGKK-----PELTLVWEPDDLEEE 840
>gi|288541382|ref|NP_001165630.1| DIS3 mitotic control homolog (S. cerevisiae)-like 2 isoform 2
[Rattus norvegicus]
gi|149016363|gb|EDL75609.1| similar to RIKEN cDNA 4930429A22 (predicted), isoform CRA_d [Rattus
norvegicus]
Length = 876
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 240/645 (37%), Positives = 341/645 (52%), Gaps = 81/645 (12%)
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
++Y +P+ + P++ V +KD P R ++ T L RI +W E+ F
Sbjct: 261 KKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDYANT----LFICRIIDWKEDCNFALGQ 316
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFC 283
+ G+ GE+EP+ IL E + S FS E L CLP +PW +P EE+ R+DLR C
Sbjct: 317 LAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPEEVGKRRDLRKDC 376
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
IFTIDPSTA DLDDALS +L+DG VGVHIADVSYFV G++LD A R+TSVY++Q
Sbjct: 377 IFTIDPSTARDLDDALSCRQLTDGTFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQ 436
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W GRT+IRSC KLSY+HAQ
Sbjct: 437 KVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTIIRSCTKLSYDHAQ 496
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+I+ + E P + + +V +++ +L+ ++K L+ +RF DGALRL+
Sbjct: 497 SMIENP----TEKIPKEELPPISPEHSIEEVHQAVLNLHSIAKQLRRQRFVDGALRLDQL 552
Query: 464 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
K F D E G P + D N L EEFMLLAN A I R FP+ ALLRRHP P
Sbjct: 553 KLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTFPEQALLRRHPPPQ 612
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
+ L + FC + GL +D SS+G ++SL K ++L N +RPMQ+A Y
Sbjct: 613 TKMLSDLVEFCDQMGLPMDVSSAGALNKSLTNTFGDDKYSLARKEVLTNMYSRPMQMALY 672
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPK 642
FCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL Y + + P
Sbjct: 673 FCSGMLQDQAQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAALG----YSEQPDVEPD 728
Query: 643 NNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLAC 702
A K C D R++A
Sbjct: 729 ---------------------------------ALQKQADHCND-----------RRMAS 744
Query: 703 RNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVE 762
+ V++ + L+ IL+K+ L SEA V+ + + + + + +++RIY +
Sbjct: 745 KRVQELSIGLFFSILVKESGPLESEAMVMGVLNQAFDVLVLRFGVQKRIYCN-------- 796
Query: 763 WLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPNDLKEE 807
+L F++ G E+ LV P+DL+EE
Sbjct: 797 ----------ALALRSYHFQKVGKK-----PELTLVWEPDDLEEE 826
>gi|432107185|gb|ELK32599.1| DIS3-like exonuclease 2, partial [Myotis davidii]
Length = 881
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 256/681 (37%), Positives = 357/681 (52%), Gaps = 87/681 (12%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
G + + ST+ S+S D ER + + + +VV I+E+ R G
Sbjct: 196 KGEEDAGAPSTKDESTSMAQDTSALPER---------SLQRSAKVVYIVEKKHSR-AATG 245
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 246 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVTRP 289
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+S F + G+ GE+EP+ IL E + S FS
Sbjct: 290 KDYANT----LFICRIVDWKEDSNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 345
Query: 256 ESLSCLPC-VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS-RVGV 313
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG + VGV
Sbjct: 346 EVLECLPQDLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKLLADGNTYEVGV 405
Query: 314 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 373
HIADVSYFV G+ LD A R+TSVY++Q+ IPMLP L EE+ SLNP D+L FS+ W
Sbjct: 406 HIADVSYFVPDGSELDQVAAQRATSVYLVQKVIPMLPRALCEELCSLNPMTDKLTFSVIW 465
Query: 374 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEG-WPQLYGQFEWS 432
L S G ++ W GRT+I SC KLSYEHAQ +I+ + T+ E P + +
Sbjct: 466 TLTSEGKILSEWFGRTIICSCTKLSYEHAQSMIES-----PTKTIPEQELPPISPEHTSE 520
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFE 491
+V +++ +L++++K L+ +RF DGALRL+ K F D E G P + D N L E
Sbjct: 521 EVHQAVLNLHQIAKELRKQRFLDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVE 580
Query: 492 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 551
EFMLLAN A I RAFP+ ALLRRHP P + L + FC + GL +D +SSG ++S
Sbjct: 581 EFMLLANMAVAHKIYRAFPERALLRRHPPPQTKMLNDLVEFCDQMGLPMDFTSSGALNKS 640
Query: 552 LEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 611
L + K ++L + +RPMQ+A YFCSG +D + HYAL P+YTHFTSP+
Sbjct: 641 LTEIFGDDKYSLARKEVLTSMCSRPMQMALYFCSGMLRDQEQFRHYALNVPLYTHFTSPI 700
Query: 612 RRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGRE 671
RR+ D++VHR L A L R LP D S+ ++
Sbjct: 701 RRFADVMVHRLLAATL--------GYRELP--------------------DVEPSVLQKQ 732
Query: 672 ALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVL 731
A HCNDR++A + V + L+ IL+K+ L SEA VL
Sbjct: 733 A--------------------DHCNDRRMASKRVHELSTSLFFAILVKESGPLESEAMVL 772
Query: 732 ALGPRFMTIYIEKLAIERRIY 752
+ + + + + + +RIY
Sbjct: 773 GVLNQAFDVLVLRYGVHKRIY 793
>gi|431917878|gb|ELK17107.1| DIS3-like exonuclease 2 [Pteropus alecto]
Length = 851
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 264/730 (36%), Positives = 373/730 (51%), Gaps = 114/730 (15%)
Query: 54 DDDSSSEAYNQEMIEREGYNYING--HHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSY 111
D DS N + + +G ++G H D+ +S D ++ + + +
Sbjct: 119 DSDSEDGHGNTQSVLVDGVKKLSGWVHEKGKEDA----GASGTKDESTSVAQDTRALPEK 174
Query: 112 PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLT 171
+R + +VV I+E+ R GFL + A KN ++Y +
Sbjct: 175 SLQR-SAKVVYIVEKKHSR-AAAGFLKLL------------ADKNSELF----KKYALFS 216
Query: 172 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEES---------PFPQ 222
P+ + P++ V +KD P R ++ T L RI +W E+S PF
Sbjct: 217 PSDHRVPRIYVPLKDCPQDFVTRPKDYADT----LFICRIVDWKEDSNFALGCFQPPFFS 272
Query: 223 AHV-LHVF--------------GRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPW 266
H+ + +F G+ GE+EP+ IL E + S FS E L CLP +PW
Sbjct: 273 VHINMKLFTLKLQDLSHLAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPW 332
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS-RVGVHIADVSYFVLPG 325
+P EEL R+DLR C+FTIDPSTA DLDDALS + L+DG + VGVHIADVSYFV
Sbjct: 333 TIPPEELSKRRDLRKDCVFTIDPSTARDLDDALSCKPLADGNAYEVGVHIADVSYFVPEE 392
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
+ LD A R+TSVY++Q+ +PMLP L EE+ SLNP D+L FS+ W L G ++D W
Sbjct: 393 SDLDKVAAERATSVYLVQKVVPMLPRPLCEELCSLNPMTDKLTFSVIWTLTPEGKILDEW 452
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 445
GRTVI SC KLSYEHAQ +I+ + + LG P + + +V R++ SL+ ++
Sbjct: 453 FGRTVICSCTKLSYEHAQSMIESP----TESILGTELPPMSPEHTREEVHRAVLSLHRIA 508
Query: 446 KILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 504
K L+ +RF+DGALRL+ K F D E G P + D N L EEFMLLAN A
Sbjct: 509 KELRKQRFSDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHK 568
Query: 505 IARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV 564
I RAFP+ ALLRRHP P + L + E FC + GL +D SS+G ++SL + K
Sbjct: 569 IFRAFPERALLRRHPPPQTKMLSDLEEFCDQMGLPMDFSSAGALNKSLTKLFGNDKYSLA 628
Query: 565 LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 624
++L N +RPMQ YFCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L
Sbjct: 629 RKEVLTNMCSRPMQ---YFCSGALQDQEQFRHYALNVPLYTHFTSPIRRFADIMVHRLLA 685
Query: 625 AALEAEKLYWKHRRMLPKNNHRE--GVRGRFLTGIFYDKDAAESLEGREALSVAALKYGV 682
AAL +RE GV
Sbjct: 686 AAL----------------GYREPPGVE-------------------------------- 697
Query: 683 PCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYI 742
D L A HCNDR++A + V++ L+ +L+K+ L SEA VL + + + +
Sbjct: 698 --PDALQKQADHCNDRRMASKRVQELSTSLFFAVLVKESGPLESEAMVLGVLNQAFDVLV 755
Query: 743 EKLAIERRIY 752
+ +++RIY
Sbjct: 756 LRYGVQKRIY 765
>gi|281209704|gb|EFA83872.1| Hypothetical ribonuclease II domain containing protein
[Polysphondylium pallidum PN500]
Length = 1265
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/604 (37%), Positives = 333/604 (55%), Gaps = 62/604 (10%)
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
+ TP P+ ++ + +P+ + LV+ W + S P
Sbjct: 643 FANFTPMDGCLPRCLIFKESIPE-----FRSNPDKYKTSLVSVNYTAWKDSSILPIGSFH 697
Query: 227 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP----WEVPQEELLSRKDLRNF 282
+FG GE+EP+ A+L E + + FS E + CLP + W + ++L R+DLRN
Sbjct: 698 SLFGECGEIEPETRALLKEYGVDTNAFSREVMDCLPKIQNASQWHITPQDLAQRRDLRNE 757
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
I +IDP TA DLDDALS RL DG +VGVHIADVS+FV PGTALD+ AQ R+T+VY++
Sbjct: 758 VIVSIDPDTAKDLDDALSCVRLPDGNFQVGVHIADVSHFVKPGTALDLSAQQRATTVYLV 817
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
Q+ IPMLP LLSEE+ SLN GV+R AFS+ W L+ G V+ W GR+VI+S C+L+Y A
Sbjct: 818 QKAIPMLPSLLSEELCSLNYGVERFAFSVIWTLSPEGKVLGEWFGRSVIKSACRLTYGIA 877
Query: 403 QDIIDGKFDV---------ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 453
Q IIDGK + + LG P+ VV S+ +L E++K L+ R
Sbjct: 878 QTIIDGKINTSWKDGLLPAQIKPILGPDTPE-----HVQTVVESVMNLREIAKRLRQSRM 932
Query: 454 TDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 513
+GA + +K F D G P + + + N L EEFMLLAN A IA+ FP +A
Sbjct: 933 DNGAFNIHPTKLAFELDPKGNPISTKIYPIYESNHLVEEFMLLANMQVATRIAKYFPANA 992
Query: 514 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 573
LLRRHP PN RKL +F FC++HG ++D S F S++ RE+LKD +F + +
Sbjct: 993 LLRRHPNPNPRKLEQFIQFCNQHGWEVDPSDVSSFGSSVKALREQLKDSPNVFAAIQIMS 1052
Query: 574 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
R M+LA YFC+G ++D W HYAL YTHFTSP+RRY D++VHR L +++ E+
Sbjct: 1053 IRSMRLAEYFCTGSEEEDL-WHHYALNVDHYTHFTSPIRRYADIIVHRLLELSIQVER-- 1109
Query: 634 WKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVAT 693
AE+ E VA GVP + + +
Sbjct: 1110 ------------------------------AEAA-NIENFQVA----GVPSTEQVAIITK 1134
Query: 694 HCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYY 753
+CN++KL R ++ K+++ +LL + + +++A VL GP+F+++ + E+RIY
Sbjct: 1135 NCNEKKLNSRKAQERSDKVFLCVLL-QNSLTITDAVVLNGGPQFLSVIVPMFGTEQRIYL 1193
Query: 754 DEVE 757
++++
Sbjct: 1194 EDLQ 1197
>gi|417405096|gb|JAA49273.1| Putative exosomal 3'-5' exoribonuclease complex subunit [Desmodus
rotundus]
Length = 881
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 230/595 (38%), Positives = 327/595 (54%), Gaps = 67/595 (11%)
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
R+Y +P+ + P++ V +KD P R ++ T L RI +W E+S F
Sbjct: 259 RKYALFSPSDHRVPRIYVPLKDCPQEFVTRPKDYANT----LFICRIVDWKEDSNFALGQ 314
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFC 283
+ G+ GE+EP+ IL E + S FS E L CLP +PW++P EE R+DLR C
Sbjct: 315 LAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQGLPWKIPPEEFSRRRDLRKDC 374
Query: 284 IFTIDPSTATDLDDALSIERLSDG-ISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
IFTIDPSTA DLDDALS + L+DG I VGVHIADVSYFV G+ LD A R+TSVY++
Sbjct: 375 IFTIDPSTARDLDDALSCKPLADGNIYEVGVHIADVSYFVPEGSELDKVAAQRATSVYLV 434
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
Q+ +PMLP +L EE+ SLNP D+L FS+ W L S G ++ W GRT+IRSC KLSYEHA
Sbjct: 435 QKVVPMLPRVLCEELCSLNPMTDKLTFSVIWTLTSEGKILSEWFGRTIIRSCTKLSYEHA 494
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
Q +I+ + E P + + +V +++ +L+ ++K L+ +RF DGALRL+
Sbjct: 495 QSMIESP----TQRIPEEELPPVSPEHTSEEVHQAVLNLHRIAKELRKQRFLDGALRLDQ 550
Query: 463 SKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
K F D E G P + D N L EEFMLLAN A I +FP+ ALLRRHP P
Sbjct: 551 LKLAFTLDHETGLPQGCYIYEYRDSNKLVEEFMLLANMAVAHRIHHSFPERALLRRHPPP 610
Query: 522 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 581
+ L + FC + GL +D SS+G ++SL + K ++L N +RPMQ+A
Sbjct: 611 QTKMLNDLVEFCDQMGLPMDFSSAGALNKSLTKIFGDDKYSLARKEVLTNMCSRPMQMAL 670
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLP 641
YFCSG +D+ + HYAL P+YTHFTSP+RR+ D++V
Sbjct: 671 YFCSGVLRDEVQFQHYALNVPLYTHFTSPIRRFADVMV---------------------- 708
Query: 642 KNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADI----LVNVATHCND 697
HR L A+L + P D+ + A HCND
Sbjct: 709 ---HR--------------------------LLAASLGHSAP-PDVEPGAVQKQADHCND 738
Query: 698 RKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
R++A + V++ L+ +L+++ L SEA V+ + + + + + +++RIY
Sbjct: 739 RRMASKRVQELSTSLFFAVLVRESGPLESEAMVMGVLNQAFDVLVLRYGVQKRIY 793
>gi|26325590|dbj|BAC26549.1| unnamed protein product [Mus musculus]
Length = 684
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/465 (44%), Positives = 282/465 (60%), Gaps = 10/465 (2%)
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
++Y +P+ + P++ V +KD P R ++ T L RI +W E+ F
Sbjct: 125 KKYALFSPSDHRVPRIYVPLKDCPQDFMTRPKDFANT----LFICRIIDWKEDCNFALGQ 180
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFC 283
+ G+ GE+EP+ IL E + S FS E L CLP +PW +P +E+ R+DLR C
Sbjct: 181 LAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQSLPWTIPPDEVGKRRDLRKDC 240
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
IFTIDPSTA DLDDAL+ RL+DG VGVHIADVSYFV G++LD A R+TSVY++Q
Sbjct: 241 IFTIDPSTARDLDDALACRRLTDGTFEVGVHIADVSYFVPEGSSLDKVAAERATSVYLVQ 300
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
+ +PMLP LL EE+ SLNP D+L FS+ W L G +++ W GRT+IRSC KLSY+HAQ
Sbjct: 301 KVVPMLPRLLCEELCSLNPMTDKLTFSVIWKLTPEGKILEEWFGRTIIRSCTKLSYDHAQ 360
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+I+ + E P + + +V +++ +L+ ++K L+ +RF DGALRL+
Sbjct: 361 SMIENP----TEKIPEEELPPISPEHSVEEVHQAVLNLHSIAKQLRRQRFVDGALRLDQL 416
Query: 464 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
K F D E G P + D N L EEFMLLAN A I R FP+ ALLRRHP P
Sbjct: 417 KLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIFRTFPEQALLRRHPPPQ 476
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
+ L + FC + GL +D SS+G ++SL + K ++L N +RPMQ+A Y
Sbjct: 477 TKMLSDLVEFCDQMGLPMDVSSAGALNKSLTKTFGDDKYSLARKEVLTNMYSRPMQMALY 536
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
FCSG +D + HYAL P+YTHFTSP+RR+ D++VHR L A L
Sbjct: 537 FCSGMLQDQEQFRHYALNVPLYTHFTSPIRRFADVIVHRLLAAGL 581
>gi|384246626|gb|EIE20115.1| RNB-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 493
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 227/506 (44%), Positives = 303/506 (59%), Gaps = 45/506 (8%)
Query: 253 FSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERL-SDGISRV 311
FS ++CLP PW + +E++ R+DLR+ I +IDP TA DLDDALSIE L + G RV
Sbjct: 9 FSDAVMACLPATPWSISNDEIMRRRDLRSTRICSIDPLTARDLDDALSIEPLPAGGGWRV 68
Query: 312 GVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSI 371
GVHIADV++FV G+ALD EAQ R TSVYM+ R IPMLP LL EE+ SLNPGVDRL FS+
Sbjct: 69 GVHIADVAHFVAAGSALDKEAQERGTSVYMVDRVIPMLPRLLCEELCSLNPGVDRLTFSV 128
Query: 372 FWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEW 431
WDL+ G V+ +W GRTVIR+C KL+YEHAQ +I+G FD L W
Sbjct: 129 IWDLSDDGRVLSQWAGRTVIRTCAKLAYEHAQAMIEGTFDTAKPPV------ALSRPHTW 182
Query: 432 SDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFE 491
VV + +L+ ++ + +RF +GALRL+N K F D G P D+ + + N L E
Sbjct: 183 PQVVGDVLALHRIAAARRRERFENGALRLDNVKFNFTLDADGNPCDAQPHVQREANQLVE 242
Query: 492 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 551
EFMLLAN + A +IA AFPD ALLRRHP P+ RK+ E A + GL ++
Sbjct: 243 EFMLLANMSIAALIAGAFPDRALLRRHPPPHQRKMEELAA--TAAGLDVNVDVGSAASLQ 300
Query: 552 LEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 611
A + D + DI+ AT+PMQLA YFC+G+ +D DW HYALA P YTHFTSP+
Sbjct: 301 ASLAALRGHPDPRMLDIVQLLATKPMQLARYFCTGEVEDPADWAHYALALPEYTHFTSPI 360
Query: 612 RRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGRE 671
RRYPD++VHR L AAL+ + + LP ++G+
Sbjct: 361 RRYPDILVHRLLAAALKLGESVMT-QTYLPDWCEQQGL---------------------- 397
Query: 672 ALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVL 731
L+ A CAD VA HCNDRK A + V++A +LY+ +LL+++ V L E V+
Sbjct: 398 -LATKA------CAD----VAAHCNDRKQAAKMVQEASSRLYLAVLLRRRPV-LCEGVVM 445
Query: 732 AL-GPRFMTIYIEKLAIERRIYYDEV 756
L G RF+ +Y+ + IE RI +++
Sbjct: 446 GLNGARFLDVYVPDIGIELRIQVEDI 471
>gi|432913204|ref|XP_004078957.1| PREDICTED: DIS3-like exonuclease 2-like [Oryzias latipes]
Length = 833
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 249/711 (35%), Positives = 363/711 (51%), Gaps = 84/711 (11%)
Query: 54 DDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQN---DGMNAIERLSAMISS 110
D D +SE+ R N PS SD E V Q+ D E S ++
Sbjct: 139 DCDGASESETSVETTRNKTRVPNPDPPSDSDCNELVDRCQKVALVDTGKPQEGSSTPQTN 198
Query: 111 YPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL 170
T + T +VV I+E+ R + G L PD+ +
Sbjct: 199 EKTLQKTAKVVYIVEKKHSR-AVTGSLKF----------------------FPDKPFALF 235
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
+P + P++ V + D P+ R E T L RI +W ++ F Q + G
Sbjct: 236 SPVDHRVPRINVPLSDCPEDFNIRPEVYANT----LFICRITDWTADNAFAQGRLAKTLG 291
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV-PWEVPQEELLSRKDLRNFCIFTIDP 289
+ GE+EP+ IL E+++ S F+PE L CLP PW +P EEL RKDLR CIFTIDP
Sbjct: 292 QAGEIEPETEGILTEHSVDFSDFTPEVLECLPQPRPWCIPPEELEKRKDLRRDCIFTIDP 351
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
+TA DLDDALS + L DG VGVHIADVSYFV TALD A R+TSVY++Q+ +PML
Sbjct: 352 ATARDLDDALSCKLLPDGNFEVGVHIADVSYFVKEDTALDEAASQRATSVYLVQQVVPML 411
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P LL EE+ SLNP DRL FS+ W L G ++ W GR+VIRSC KLSY+HAQ +I+
Sbjct: 412 PRLLCEELCSLNPDFDRLTFSVIWKLTPEGKILSEWFGRSVIRSCAKLSYDHAQSMIEAP 471
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF-L 468
+ S N L P + ++ ++ L+ +++ L+ +R + G L+L+ K F +
Sbjct: 472 EKLFSPNELQLDNP----EHPIDEIHEAVLRLHSIAQNLRRQRISTGTLKLDQVKLSFNI 527
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 528
E P + +D N L EEFMLLAN A I R FPD ALLRRHP P + + E
Sbjct: 528 NKESMMPNSCSVYEYKDSNRLVEEFMLLANIATAHHIHRKFPDLALLRRHPPPKTKMMEE 587
Query: 529 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF 588
+ CS+ G+ +D SS G +SL K + +L + ++PMQ+A YFCSG
Sbjct: 588 LKEMCSQLGIDIDLSSPGALQESLNNLTGKDEYSAARKAVLTHLCSKPMQMALYFCSGML 647
Query: 589 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREG 648
K++ + HYAL P+YTHFTSP+RRY D++VHR L ++L+ H ++
Sbjct: 648 KNEQLFKHYALNIPLYTHFTSPIRRYADIIVHRLLASSLKC----GPHLQL--------- 694
Query: 649 VRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDA 708
+A+ +E ++AL HCN++K+ + V +
Sbjct: 695 --------------SAQEVE-KQAL--------------------HCNNKKMLAKRVWEL 719
Query: 709 CVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGL 759
+L+ +L+++ L S A V+ + + + + K +++R+Y +GL
Sbjct: 720 SSELFFGLLVRESGPLDSAAMVMRVLDQSFDVLVIKYGVQKRVYCKATKGL 770
>gi|307105455|gb|EFN53704.1| hypothetical protein CHLNCDRAFT_136531 [Chlorella variabilis]
Length = 1211
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 251/706 (35%), Positives = 361/706 (51%), Gaps = 128/706 (18%)
Query: 100 AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 159
A+E ++ + R TG VV+++E S RR+ +VG + +++ +K+ +
Sbjct: 513 ALEFIAGQLRQMEGWRVTGEVVAVLEPSRRRESVVGVM------------KQEGEKDTGT 560
Query: 160 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEME---LVAARIDEWNE 216
L P P+ P+M+V LP IK+ L+ + + LV+AR+ W+
Sbjct: 561 FF--------LFPCDPRLPRMMVRSATLPPQIKQMLKTEAQALALSARTLVSARLAAWDP 612
Query: 217 ESPFP--QAHVLHVFGRGGEVEPQINAIL-YENAICCSGFSPESLSCLPCVPWEVPQEEL 273
PFP QA V G+ G++ + A+L E F+PE L+CLP PW + +EE+
Sbjct: 613 GFPFPLAQARVRASLGQAGDLASETAALLSMEQVQDDDQFTPEVLACLPPTPWSISEEEV 672
Query: 274 LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 333
+R+DLR +F+IDP TA DLDDALS
Sbjct: 673 AARRDLRRHRVFSIDPPTARDLDDALS--------------------------------- 699
Query: 334 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 393
VY++ R IPMLP LL EE+ LNPGVDRLAFS+ WDL+ GD++ W GRTVIRS
Sbjct: 700 -----VYLVDRVIPMLPRLLCEEL--LNPGVDRLAFSVVWDLSPEGDILSTWAGRTVIRS 752
Query: 394 CCKLSYEHAQDIIDGKF-DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 452
C KL+Y H Q +I+G+F +E E L G W DVV+ +L+ ++ L+ +R
Sbjct: 753 CGKLAYPHVQSMIEGQFLALEGQEPPCE----LAGGHSWPDVVKDSLTLHRIASRLRKRR 808
Query: 453 FTDGALRLENSKPVFLFDEYGTPYD--------SVLSGREDLNFLFEEFMLLANKTAAEV 504
F GALRL+N++ F D G P D + L RE N L EEFMLLAN T A +
Sbjct: 809 FDSGALRLDNTRLYFKLDGEGNPQDYGVYEQAGTCLVARE-ANQLVEEFMLLANMTTARM 867
Query: 505 IARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV 564
+A AFPD +LLR HP PN K+ E ++ G LDTS +G QSL RE D
Sbjct: 868 VAEAFPDRSLLRCHPPPNTHKMAELSGTAAELGFHLDTSGAGSLQQSLSALRESAATDPA 927
Query: 565 LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 624
+++ AT+PMQ A YFC+G+ D++ W H+ALA YTHFTSP+RRYPD++VHR +
Sbjct: 928 ALEVITLLATKPMQNARYFCTGETPDESFWRHFALAVTHYTHFTSPIRRYPDIIVHRLMA 987
Query: 625 AALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPC 684
A L+ R+G S E R A ++G+
Sbjct: 988 ALLD-----------------RQG-----------------SKEQRMA------RHGLYP 1007
Query: 685 ADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLAL-GPRFMTIYIE 743
+ +A H NDRK+A ++V+D ++LY+ ++L ++ L+ +A V+ L G RF YI
Sbjct: 1008 TREVGAIAAHANDRKMAAKSVQDGSLRLYLCVMLYRQP-LVCDAVVMQLGGSRFFDAYIP 1066
Query: 744 KLAIERRIYYDEV----EGLIVE-WLETTSTLVLSLCAHKRSFKRG 784
L + RI+ + +G IV W L L A + +RG
Sbjct: 1067 ALGCDVRIHTGSLLRGGDGAIVSAWQPADKVLELRHAASNQQ-QRG 1111
>gi|330791031|ref|XP_003283598.1| hypothetical protein DICPUDRAFT_96430 [Dictyostelium purpureum]
gi|325086458|gb|EGC39847.1| hypothetical protein DICPUDRAFT_96430 [Dictyostelium purpureum]
Length = 1292
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/604 (36%), Positives = 334/604 (55%), Gaps = 59/604 (9%)
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
+ P PK + DSI + E + + LV W + + P H +
Sbjct: 670 FTSFAPMDTSLPKCCIF----KDSIPQYKSESEK-YKRALVMISYSSWKDTALLPCGHFI 724
Query: 227 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP----WEVPQEELLSRKDLRNF 282
+FG G++EP+ +A+L E + FS E + CLP VP W +++L R+DLR +
Sbjct: 725 SLFGECGKIEPETHALLSEFGVETDPFSREVMDCLPKVPNSSKWLPSKQDLADRRDLRTY 784
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
I TIDP TA DLDDAL L DG VGVHIADVS+FV GT LD AQ ++T+VY++
Sbjct: 785 EICTIDPDTAKDLDDALHCIELPDGNFEVGVHIADVSHFVKSGTELDKCAQRKATTVYLV 844
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
Q+ IPMLP LLSEE+ SLN GV+RLAFS+ W L+ +G++++ W GR+VI+S C+L+Y A
Sbjct: 845 QKAIPMLPSLLSEELCSLNMGVERLAFSVIWKLSPSGEILEEWFGRSVIKSFCRLTYGIA 904
Query: 403 QDIIDGKF---------DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 453
Q +ID K + LG P+ + V +S+ L ++K L++ R
Sbjct: 905 QALIDDKITNCWEDFVPKEKVKKELGPNTPEHILR-----VKKSVMGLRGIAKCLRNTRI 959
Query: 454 TDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 513
+GA + SK F DE G P + + + N L EE+MLLAN AE IA+ FP +A
Sbjct: 960 ENGAFTIHPSKLAFELDEKGNPISTKIYPIYESNNLVEEYMLLANMRVAERIAKFFPSNA 1019
Query: 514 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 573
LLR+HP+PN KL F +FC+KHG ++DTSSS F +S+++ +E + D +L I + +
Sbjct: 1020 LLRKHPSPNENKLESFISFCAKHGFEIDTSSSLTFGESIKKLKETVGDIDILMAIQL-LS 1078
Query: 574 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
R M+LA YFC+ +++ DW HYAL P YTHFTSP+RRY D++VHR L+ +++ E
Sbjct: 1079 IRSMKLAEYFCTST-EEEEDWRHYALNAPFYTHFTSPIRRYADIIVHRLLDLSIKIENAS 1137
Query: 634 WKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVAT 693
+ H+E + G + + P ++++ +A
Sbjct: 1138 --------TDKHKEEILGTLFSKL-------------------------PSSELVCTIAK 1164
Query: 694 HCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYY 753
+CN++KL R ++ K+++ +LL+ A L G F+T + + E++IY
Sbjct: 1165 NCNEKKLNARKAQERSDKVFLCVLLENHPTTCG-AVALNTGSTFITCIVPQFGSEQKIYL 1223
Query: 754 DEVE 757
++++
Sbjct: 1224 EDLK 1227
>gi|145353210|ref|XP_001420914.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581150|gb|ABO99207.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 538
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 228/579 (39%), Positives = 315/579 (54%), Gaps = 48/579 (8%)
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
P PK PK V +P S++K L G +E VA R+ +W++ P ++ V G
Sbjct: 1 VPLDPKLPKGRVSEFSVPKSLQKTLASGAEDVEDVFVAVRLRKWSKGMSMPMMDIIEVVG 60
Query: 231 RGG---EVEPQINAILYENAICCSGFSPESLSCLPCVP----WEVPQEELLSRKDLRNFC 283
+G +++ I+ E+ I FS ++ +CLP V W++P EE+ R + R
Sbjct: 61 KGSMGDDLDFMTKVIVAEHGIESGDFSADATACLPKVKVGDHWKIPPEEMKRRVNFREKL 120
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
+F+IDP TA DLDDALS++ L DG VGVHIADVS+FV P T LD EA+ R T+ Y++
Sbjct: 121 VFSIDPPTARDLDDALSVQVLPDGCLNVGVHIADVSHFVKPDTPLDAEARERGTTTYLVH 180
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
PMLP LL E + SLNPGV+RL FS+ W + G V + R VI+S KLSY H Q
Sbjct: 181 TIFPMLPRLLCENLCSLNPGVERLTFSVEWKMTRGGVVKNVSFKRGVIKSAAKLSYIHVQ 240
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
++ID DV + + + G + DV+ SI L +K ++ KRF GA+RL+
Sbjct: 241 NVIDAGSDVNKAKEALDDV-KFSGAYTAEDVIESISILNAAAKAMRKKRFEAGAVRLDQP 299
Query: 464 KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
K F ++ P + D N L EE+MLLAN AE IA FP A+LR HP PN
Sbjct: 300 KVGFELNDDYEPVGAAPYVIRDSNRLVEEYMLLANMYVAEFIAEIFPSHAMLRCHPPPNE 359
Query: 524 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 583
RKL E F S+H + +D SSS + H SL R +D LFDI+ AT+PMQLA YF
Sbjct: 360 RKLMELSTFASEHDIDIDISSSKRLHDSL---RAIARDSQDLFDIVQLLATKPMQLAKYF 416
Query: 584 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKN 643
C+G D+ W HYALA P YTHFTSP+RRYPD++VHR L AALE H K+
Sbjct: 417 CTGSV-DEEQWRHYALAVPYYTHFTSPIRRYPDIIVHRLLAAALE-------HAERQGKS 468
Query: 644 NHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACR 703
+ R+ V K+ + +I +VA HCN+RKLA +
Sbjct: 469 SERDVVE----------------------------KHSLMTPEICSDVADHCNERKLAAK 500
Query: 704 NVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYI 742
++ L++ L+K V ++ A V LG +++ Y+
Sbjct: 501 YAQERSQHLFLCKYLQKNPV-IARAIVRQLGQQYVVAYL 538
>gi|344292594|ref|XP_003418011.1| PREDICTED: DIS3-like exonuclease 2 [Loxodonta africana]
Length = 885
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 233/600 (38%), Positives = 319/600 (53%), Gaps = 74/600 (12%)
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
R+Y +P+ + P++ V +KD P R ++ T L RI +W E+S F
Sbjct: 263 RKYALFSPSDHRVPRIYVPLKDCPQDFVTRPKDYANT----LFICRIVDWKEDSNFALGQ 318
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFC 283
+ G+ GE+EP+ IL E + S FS E L CLP +PW +PQEE R+DLR C
Sbjct: 319 LAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLKCLPQSLPWTIPQEEFSKRRDLRKDC 378
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
IFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV G+ LD A R+TSVY++Q
Sbjct: 379 IFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFVPDGSDLDRLAAERATSVYLVQ 438
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
+ +PMLP LL EE+ SLNP D+L FS+ W L G ++ W GRT+IRSC KLSYEHAQ
Sbjct: 439 KVVPMLPRLLCEELCSLNPMTDKLTFSVIWTLTPEGKILSEWFGRTIIRSCTKLSYEHAQ 498
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+I+ L P + + +V +++ +L+ ++K L+ +RF GALRL+
Sbjct: 499 SMIESPAQPVPEKAL----PPISPEHTSQEVHQAVLNLHRIAKELRKQRFVGGALRLDQL 554
Query: 464 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
K F D E G P + D N L +EFMLL N A + RAFP+ ALL +P
Sbjct: 555 KLAFTLDHETGLPQGCHVYEYRDSNKLMKEFMLLGNMAVAHKVQRAFPERALLAPYPLSQ 614
Query: 523 MRKLREFEAFCSKHGLQLD-------TSSSGQFHQSLEQAREKLKDD-YVLF--DILINY 572
L + C + GL+ T S + Q + E DD Y L ++L N
Sbjct: 615 TGCL----STCGRQGLRASPEPDLYVTRVSWVYLQ--KSLTETFGDDTYSLARKEVLTNM 668
Query: 573 ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
+RPMQ+A YFCSG +D T + HYAL P+YTHFTSP+RR+PDL+VHR L AAL
Sbjct: 669 CSRPMQMALYFCSGMLEDRTQFRHYALNIPLYTHFTSPIRRFPDLMVHRLLAAAL----- 723
Query: 633 YWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVA 692
G R A LE D + A
Sbjct: 724 ---------------GYR------------ALPDLE----------------PDAVQKQA 740
Query: 693 THCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
HCNDR++A + V++ L+ +L+K+ L SEA V+ + + + + +++RIY
Sbjct: 741 DHCNDRRMASKRVQELSTSLFFAVLVKESGPLESEAMVMGVLNQAFDVLVLCYGVQKRIY 800
>gi|167519669|ref|XP_001744174.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777260|gb|EDQ90877.1| predicted protein [Monosiga brevicollis MX1]
Length = 583
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/531 (41%), Positives = 303/531 (57%), Gaps = 42/531 (7%)
Query: 115 RPTGRVVSIIERSPRRDGI-VGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
+P GRVV+II+ P + + GFL R+D D++++ +P
Sbjct: 20 QPVGRVVAIIKAPPPEERLFAGFLK-----------RRDQ----------DQDFLLFSPK 58
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ P+M V +PD + ++ LV +EW +S F + V G+ G
Sbjct: 59 DSRVPRMRVPAHSVPDEVDDKM----------LVIVSFEEWTAKSRFARGSFKRVLGQAG 108
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRNFCIFTIDP 289
++ + AIL E I F P L CLP V P+ +P +E+ R+DLR+ IFTIDP
Sbjct: 109 TIDAETQAILMEYKIPFEDFKPHVLKCLPKVDEKHPFVIPDDEIAKRRDLRDVRIFTIDP 168
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
STA DLDDAL +L DG +GVHIADVSYFV P T LD EA+ R+TS Y++Q PML
Sbjct: 169 STARDLDDALHCTQLPDGNFEMGVHIADVSYFVEPNTPLDEEAEFRATSTYLVQSVYPML 228
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P LL E + SLNP DRLAFS+ W L+ G+ W GRTVIRS CKL+Y+HAQ ID
Sbjct: 229 PRLLCEGLCSLNPDEDRLAFSVIWVLDPEGNRKSTWFGRTVIRSRCKLAYDHAQLFIDD- 287
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
ES +P+L + +DV + + +++ ++D+RF +GALRL +K F
Sbjct: 288 ---ESKEWNDVEFPRLSADTQGADVKADVLRMNHIAQQMRDRRFANGALRLNKTKLSFRL 344
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
E P ++ + N L EEFMLLAN + AE IA+AFP ALLRRHP P +L E
Sbjct: 345 GEDMLPVETWPYVQRAANQLVEEFMLLANISVAECIAKAFPQCALLRRHPEPFTSRLEEV 404
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
A + G+ LDT SSG S+ +E +D + +++ T MQ A YF +GD K
Sbjct: 405 AARFQRVGIPLDTGSSGDIAASIRAYQENEQDQGRV-EVMQLLLTMAMQQAVYFSTGDSK 463
Query: 590 -DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRM 639
+ +DW HYALA P+YTHFTSP+RRY D+VVHR L AALE ++ +++H ++
Sbjct: 464 LEQSDWKHYALATPMYTHFTSPIRRYADVVVHRLLLAALENKETFYEHDKV 514
>gi|328772514|gb|EGF82552.1| hypothetical protein BATDEDRAFT_86346 [Batrachochytrium
dendrobatidis JAM81]
Length = 1062
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 239/664 (35%), Positives = 340/664 (51%), Gaps = 88/664 (13%)
Query: 107 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 166
++ + R G+VV II VG L++++ + KNRSS
Sbjct: 345 VVQEHVESRIYGKVVGIISCKTANRIFVGTLHLDRPLSKSPS----IDKNRSS------R 394
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
+I P+ P M++ + P K+ L + ++ + LV A + W+ P A
Sbjct: 395 WIWFMPSDKSIPFMIISKELAP---KEFLADPESFANI-LVTATLKSWSTTDALPHADYN 450
Query: 227 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 286
+ G+ GE+ + A+L + FS L CLP +PW +P+EE+ R DLR IF+
Sbjct: 451 GLLGQMGELHVESKALLQAAGVVWDDFSDSVLDCLPSLPWSIPEEEIAKRWDLRKTRIFS 510
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP TA DLDDA+S L DG VGVHIADVSYFV TALD EA R+T+VY++QR I
Sbjct: 511 IDPETAKDLDDAVSCRALPDGRFEVGVHIADVSYFVHQKTALDDEALYRATTVYLVQRAI 570
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDI 405
PMLP LL EE+ SLNP VDRLAFS+FW ++ G ++ + GR+VIRSC KLSYEHAQ +
Sbjct: 571 PMLPRLLCEELCSLNPDVDRLAFSVFWIFDAQGTIIGQPRFGRSVIRSCAKLSYEHAQAV 630
Query: 406 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
IDGK + ++ Q D+ I LY+ SKI++ KR+ DGAL + + K
Sbjct: 631 IDGKPFAKHV--------EISAQVTLEDISTDILQLYKFSKIMRKKRYDDGALSIHSIKL 682
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
F D G P +S + +D N L EE+MLLAN A+ I FP +LLRRHP P
Sbjct: 683 WFSLDHLGNPVESGMYELKDSNRLIEEYMLLANMAVAQKIHEHFPSESLLRRHPIPGCSA 742
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
+ +F ++ G+ +D SSSG +S E + L + + ++ A R M+ A Y+ S
Sbjct: 743 MTKFVEKMARIGIVIDASSSGSLQESFEAIEDPL---HRMITRMV--AIRTMRRAVYYSS 797
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNH 645
GD + D+ HYAL P YTHFTSP+RRY DLVVHR LN+ LE
Sbjct: 798 GDPSVE-DFKHYALCVPFYTHFTSPIRRYCDLVVHRLLNSVLEG---------------- 840
Query: 646 REGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNV 705
+LE + A ++++A CNDRK A R
Sbjct: 841 --------------------NLEASSPYTNAT----------IMDIAEQCNDRKDASREA 870
Query: 706 KDACVKLYMWILLKKKEV-------------LLSEARVLALGPRFMTIYIEKLAIERRIY 752
+ A KL++W LKK +++EA V +G R + + I++R++
Sbjct: 871 QTASSKLFLWAYLKKLAAANRIESKNEGFAEIIAEAYVQDVGTRSYDVLVPSYGIDQRVW 930
Query: 753 YDEV 756
++
Sbjct: 931 IEDA 934
>gi|443698487|gb|ELT98463.1| hypothetical protein CAPTEDRAFT_225282 [Capitella teleta]
Length = 946
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/592 (37%), Positives = 315/592 (53%), Gaps = 64/592 (10%)
Query: 172 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
PT + P++ + ++ P ++R + T L A I W S + + G
Sbjct: 348 PTDHRIPRIKIPIESCPADFRQRPDIYAKT----LFIASITNWEPRSTYAMGQLQRSLGE 403
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPS 290
G +EP+ A+L + ++ + FS + ++CLP +PW +P EE +RKDLRN C+FTIDP+
Sbjct: 404 AGMIEPETEAMLTQYSVDETEFSADVINCLPQNLPWSIPVEEYSNRKDLRNECVFTIDPA 463
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ---RKIP 347
TA DLDDAL L DGI +GVHIADVSYFV GTALD A R+TSVY++Q + +P
Sbjct: 464 TARDLDDALHCCHLGDGIYEIGVHIADVSYFVSEGTALDQVASDRATSVYLVQKLSKVVP 523
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 407
MLP LL E++ SLNP DRL FS+ W + G+++D+W GR++IRSC KLSY+HAQ I+
Sbjct: 524 MLPRLLCEKLCSLNPDEDRLTFSVIWRITEEGEILDQWFGRSIIRSCVKLSYDHAQGFIE 583
Query: 408 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
N E P + F + + +L +V+ L+ +RF GALRL+ K F
Sbjct: 584 NP----EQNWEAEQLPPVSEGFCVEQIKERVLNLNKVAVNLRKQRFDAGALRLDKVKLQF 639
Query: 468 LFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
D E G P + ++D N L EEFMLLAN + A I FPD ++LRRHP P +R L
Sbjct: 640 SLDKESGLPNGFSVYQQKDSNRLVEEFMLLANMSVAHKIHENFPDQSVLRRHPPPQLRML 699
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSL-EQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
E + C G+ +DT+SS QS+ QA ++ +L + RPMQLA YFCS
Sbjct: 700 DELSSICKSLGIPIDTTSSLTMQQSIAAQAENSEQEAKSRMLVLTSMCARPMQLALYFCS 759
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNH 645
G +D+ + HYAL P YTHFTSP+RRYPD++VHR L A+L
Sbjct: 760 GTVEDEDLYQHYALNVPFYTHFTSPIRRYPDIMVHRQLAASL------------------ 801
Query: 646 REGVRGRFLTGIFYDKDAAESLEGREALSVAALK-YGVPCADILVNVATHCNDRKLACRN 704
G A S + + V C HCND++ A +
Sbjct: 802 -----------------------GYSAPSATDKRTFQVQC--------NHCNDKRTAAKM 830
Query: 705 VKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
V + L+ + +K+ +A V A+ R + I + + +R+Y D++
Sbjct: 831 VSELSADLFFSVFVKECGPFEHKAMVQAVLDRSFDVLILAVGVVKRVYLDKL 882
>gi|66815805|ref|XP_641919.1| hypothetical protein DDB_G0278757 [Dictyostelium discoideum AX4]
gi|60469999|gb|EAL67980.1| hypothetical protein DDB_G0278757 [Dictyostelium discoideum AX4]
Length = 1343
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 217/610 (35%), Positives = 325/610 (53%), Gaps = 70/610 (11%)
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
+ P PK + + +P + + + LV+ W E S P H
Sbjct: 722 FTNFIPMDTTLPKCCIFKESIP-----QYKSNPEKYKKSLVSVGYSGWKETSLLPIGHYK 776
Query: 227 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP----WEVPQEELLSRKDLRNF 282
+FG G++EP+ A+L E + FS E + CLP + W +++L R+DLRN
Sbjct: 777 SLFGECGKIEPETYALLSEFGVETDPFSKEVMECLPKIDQSKLWLPSEQDLKGRRDLRNL 836
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
I TIDP TA DLDDAL L DG VGVHIADVS+FV P TALD AQ ++T+VY++
Sbjct: 837 EICTIDPDTAKDLDDALHCIELEDGNFEVGVHIADVSHFVKPDTALDKCAQRKATTVYLV 896
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
Q+ IPMLP LLSEE+ SLN GV+RLAFS+ W L+ G+++D W GR+VI+S +L+Y A
Sbjct: 897 QKAIPMLPSLLSEELCSLNMGVERLAFSVIWKLSPTGEILDEWFGRSVIKSFSRLTYAIA 956
Query: 403 QDIIDGKFDV---------ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 453
Q +ID K + LG Q + V + + L ++K ++ R
Sbjct: 957 QALIDDKITNAWEDWIPADKMRKDLGPNTAQHIAR-----VKKGVLGLRSIAKHMRSNRI 1011
Query: 454 TDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 513
+GA + SK F D+ G P + + + N L EE+MLLAN AE I + FP ++
Sbjct: 1012 ANGAFTIHPSKLAFALDDKGNPVSTKIYPIYESNNLVEEYMLLANMRVAERIGKFFPSNS 1071
Query: 514 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 573
LLRRHP+PN KL F +FCSKHG ++D+SSS F +S+++ ++ D +L I + +
Sbjct: 1072 LLRRHPSPNENKLESFISFCSKHGFEIDSSSSLTFGESIKKLKDTCTDINILMAIQL-LS 1130
Query: 574 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
R M+LA YFCS + +++ DW HYAL P YTHFTSP+RRY D++VHR L+ +++ EK
Sbjct: 1131 IRSMKLAEYFCSNN-EEEEDWRHYALNAPFYTHFTSPIRRYADIIVHRLLDLSIQVEKNN 1189
Query: 634 WKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVAT 693
H LP ++ES+ +
Sbjct: 1190 RNHTEQLP---------------------SSESITA---------------------ICK 1207
Query: 694 HCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYY 753
+CN++KL R ++ K+++ +LL+ +EA L G ++ + + E+++Y
Sbjct: 1208 NCNEKKLNARKAQERSDKVFLCVLLENHPT-TTEAVALNTGASYIVCIVPQFGSEQKVYL 1266
Query: 754 DEV--EGLIV 761
D++ EG I+
Sbjct: 1267 DDLQKEGTIL 1276
>gi|156388005|ref|XP_001634492.1| predicted protein [Nematostella vectensis]
gi|156221576|gb|EDO42429.1| predicted protein [Nematostella vectensis]
Length = 766
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 241/689 (34%), Positives = 344/689 (49%), Gaps = 94/689 (13%)
Query: 71 GYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRR 130
G ++ PS +T S +N E A + T VV IIE+ R
Sbjct: 107 GASHEGNKTPSKGGTTPHTPESSKNKQRKNEEIPDAYLQQ------TAHVVYIIEKKHTR 160
Query: 131 DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDS 190
G L F Y G VPD + +P+ + P+M + P
Sbjct: 161 -AASGNLKP---FQYNQGD------------VPDGLF---SPSDSRLPRMRIPHAKCPLG 201
Query: 191 IKKRLEEGDATIEMELVAARIDEWNEESP----FPQAHVLHVFGRGGEVEPQINAILYEN 246
R ++ +T L RI EW E +P F + G GE+EP+ I +E
Sbjct: 202 FFDRPQDFAST----LFVGRITEWPENAPMDNFFATGEISRSLGEAGEIEPETQGIFFEY 257
Query: 247 AICCSGFSPESLSCLPC-VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS 305
I F E+L CLP PW +P+ E R+D R+ C+FTIDP TA DLDDAL +RLS
Sbjct: 258 GIDPGPFPDEALDCLPKETPWSIPETEFAHRRDFRDECVFTIDPLTARDLDDALHCKRLS 317
Query: 306 DGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVD 365
DG+ VGVHIADVS+FV GT LD AQ R+TS YM+Q +PMLP L EE+ SLNP D
Sbjct: 318 DGLIEVGVHIADVSFFVKTGTPLDDIAQERATSTYMVQTVVPMLPRRLCEELCSLNPDED 377
Query: 366 RLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQL 425
RL FS+ W + G++ W GR +IRS K++YEHAQ++ID S + L P +
Sbjct: 378 RLTFSVVWIMTDQGEIKSDWKGRGIIRSRVKMAYEHAQEMIDKPNKKWSDSEL----PPI 433
Query: 426 YGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGRE 484
+ S++V+ + L ++++ L+ RF +GALRL+ K F D E G P + +
Sbjct: 434 AEGTDVSEIVKRVNLLAKIARQLRRNRFENGALRLDQVKLQFDLDKETGMPIGYHVYQQR 493
Query: 485 DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS 544
+ N L EEFMLLAN T A I +AFPD ALLRRHP P+ +++ + C G++ + +S
Sbjct: 494 ESNKLIEEFMLLANMTVAHHIYKAFPDMALLRRHPKPHEKQMEDLLELCRNLGIKYNANS 553
Query: 545 SGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVY 604
S SL Q +IL+ +PM+ A YFC+G +++ ++GHYAL+ P+Y
Sbjct: 554 SKSIQVSLAQ----FPSGSAQHEILVQLTMKPMKNALYFCAGTVEEE-EYGHYALSVPLY 608
Query: 605 THFTSPLRRYPDLVVHRTLNAALE-AEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDA 663
THFTSP+RRY D++VHR L A+LE AE L DKDA
Sbjct: 609 THFTSPIRRYADVIVHRLLAASLELAEPL---------------------------DKDA 641
Query: 664 AESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEV 723
+ + ++A HCND KLA + + +L+ I +++
Sbjct: 642 VD----------------------VDSIAGHCNDCKLAAKTAGELSSELFFAIFVRECGP 679
Query: 724 LLSEARVLALGPRFMTIYIEKLAIERRIY 752
L + VL + +++ L + +RIY
Sbjct: 680 LEEDGYVLGIMDMSFDVFVPALGVTKRIY 708
>gi|213408465|ref|XP_002175003.1| mitotic control protein dis3 [Schizosaccharomyces japonicus yFS275]
gi|212003050|gb|EEB08710.1| mitotic control protein dis3 [Schizosaccharomyces japonicus yFS275]
Length = 859
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 216/550 (39%), Positives = 310/550 (56%), Gaps = 25/550 (4%)
Query: 80 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNV 139
P++ T + SSS ++D + A+ +S + P +VV+I ER PR D +VG L+
Sbjct: 178 PASESVTVQGSSSSEDD----LTADPALPTSVASSNPNAKVVAIAERWPR-DSVVGILHP 232
Query: 140 NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGD 199
W + GS +++K N Y P + P ++ DL + E
Sbjct: 233 PGW-SPNTGSPRNSKSN----------YCIFQPQSKRMPFHLIHKNDLGELSGSNWREQI 281
Query: 200 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 259
E + + + W+ S +P A V G +E AIL E + F E L
Sbjct: 282 TQNEGVIFSVKRKTWSATSRYPLAKVDKRIGHLSNIEASTQAILLERMVNSREFPDEVLD 341
Query: 260 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 319
CLP W + EE R+ + + TIDP TA DLDDA+S DG R+ VHIADVS
Sbjct: 342 CLPSDNWCITDEERAKRRSFLDQIVLTIDPETARDLDDAVSCIDNGDGTYRISVHIADVS 401
Query: 320 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 379
+FV P TALD EA+ R+T+VY++QR IPMLP LL E + SLNP V+RLAFS+ W ++ G
Sbjct: 402 HFVKPETALDNEARSRATTVYLVQRAIPMLPTLLCERLCSLNPSVERLAFSVEWLVDRNG 461
Query: 380 -DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSI 438
++ RW G+++I++CC+L+Y AQ+I++GK S G G P G F+ +DV SI
Sbjct: 462 RELGPRWFGKSLIKTCCRLTYTEAQNILEGK-----SWEEGVGKPISDG-FKATDVEVSI 515
Query: 439 KSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLAN 498
++L ++K L+ RF +GA+ + S+ F DE G P + +D N L EEFML AN
Sbjct: 516 RNLNIIAKALRKARFDNGAVSVNTSELKFRLDEQGLPQKCEVYEHKDANRLIEEFMLFAN 575
Query: 499 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
++ AE I+ FP ALLRRH P ++L EF F + G D S+S +F+ SL++ REK
Sbjct: 576 RSVAEKISNHFPHVALLRRHAPPKEKQLGEFIRFLAHLGFDFDGSTSARFNDSLQRLREK 635
Query: 559 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
D + +++ N A R +Q A YFC+G ++W HYALAF YTHFTSP+RRYPD++
Sbjct: 636 FPSD--ITELIENMAARSLQRAEYFCTGSTDSVSEWLHYALAFSHYTHFTSPIRRYPDII 693
Query: 619 VHRTLNAALE 628
VHR L A++
Sbjct: 694 VHRLLECAVQ 703
>gi|19115422|ref|NP_594510.1| ribonuclease II (RNB) family (predicted) [Schizosaccharomyces pombe
972h-]
gi|74581952|sp|O14040.1|DIS3L_SCHPO RecName: Full=Dis3-like exonuclease C2C4.07c
gi|2414618|emb|CAB16367.1| ribonuclease II (RNB) family (predicted) [Schizosaccharomyces
pombe]
Length = 927
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 221/555 (39%), Positives = 309/555 (55%), Gaps = 33/555 (5%)
Query: 84 DSTEKVSSSQQND----GMNAIERL--SAMISSYPTKRPTGRVVSIIERSPRRDGIVGFL 137
+ EKV +D M +ERL ++ S R RVV+I E+ IVG L
Sbjct: 255 NGVEKVKIKDHDDELGGAMEHLERLEIKSVASFKGDSRTRARVVAI-EKRAEISKIVGIL 313
Query: 138 NVNQWF--NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
W N + S+K + Y P + P + + DL D +
Sbjct: 314 RAPGWSLKNVEYVSKKSS-------------YAIFIPKDKRLPFITIHKNDLSDLSGENW 360
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
E +L + I W+ S +P + G +VE NA+L EN I S FS
Sbjct: 361 IENILKHHDQLFSVEITRWSIYSRYPMGVLGEKLGNITDVEAYTNALLLENGISSSPFSD 420
Query: 256 ESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHI 315
E L+CLP W + EE+ R+DLRN I TIDP TA DLDDA+S L +G VGVHI
Sbjct: 421 EVLNCLPPDDWIISHEEIKKRRDLRNELIITIDPETARDLDDAVSCRALDNGTYEVGVHI 480
Query: 316 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 375
ADV++FV P +ALD EA R+T+VY++Q+ IPMLP LL E + SLNP V+RLAFS+FW L
Sbjct: 481 ADVTHFVKPDSALDKEAASRATTVYLVQKAIPMLPPLLCERLCSLNPNVERLAFSVFWKL 540
Query: 376 NSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK-FDVESSNTLGEGWPQLYGQFEWSD 433
+S G ++ RW G+TVI++C +L+Y AQ +I+GK +D +G G D
Sbjct: 541 DSNGKEIGKRWFGKTVIKTCARLAYSEAQGVIEGKSWDDAVGKPIG-------GTHTPKD 593
Query: 434 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEF 493
V SI +L E+S+ L+ RF GA+ + +++ F DEYG P + + D N L EEF
Sbjct: 594 VETSILTLCEISRKLRKDRFAKGAVEINSTELKFQLDEYGMPNKCEVYEQTDANHLIEEF 653
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
MLLAN++ AE I++ F +++LLRRH +P +++ EF F D SSS F+ S+
Sbjct: 654 MLLANRSVAEHISKNFSNNSLLRRHASPKEKQINEFCHFLKSMNFDFDASSSAAFNASMV 713
Query: 554 QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
+ R ++ L ++ N A R + A YFC+GDF + TDW HYAL+F YTHFTSP+RR
Sbjct: 714 RLRSTFNEE--LVELFENMAVRSLNRAEYFCTGDFGEKTDWHHYALSFNHYTHFTSPIRR 771
Query: 614 YPDLVVHRTLNAALE 628
YPD++VHR L +L+
Sbjct: 772 YPDIIVHRLLERSLK 786
>gi|405963531|gb|EKC29095.1| DIS3-like exonuclease 2 [Crassostrea gigas]
Length = 1174
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 223/667 (33%), Positives = 340/667 (50%), Gaps = 89/667 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV+IIE+ R G + + ++ R++ P
Sbjct: 538 QPTARVVAIIEKRNNR-ACTGNIML--------------------MTDKSRDWAFFRPID 576
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEE-SPFPQAHVLHVFGRGG 233
+ P+M V + + P +R ++ T L RI +W + F ++ G G
Sbjct: 577 SRMPRMRVPMSECPKDFYERPDDHKNT----LFICRIVDWKDNMQAF--GSLMKSLGEAG 630
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPC--VPWEVPQEELLSRKDLRNFCIFTIDPST 291
E+EP+ +L EN + S F E++ LP +PW +P EE R+D R+ C+FTIDPST
Sbjct: 631 EIEPETEGMLIENDVDFSEFPQEAIDSLPVQQLPWRIPAEEYEYRRDFRSQCVFTIDPST 690
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
A DLDDALS E+L DG VGVHIADVSYF+ GT LD A R+TSVY++Q+ IPMLP
Sbjct: 691 ARDLDDALSCEQLPDGNFEVGVHIADVSYFLKEGTILDKIAGHRATSVYLVQKVIPMLPR 750
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII---DG 408
+L E++ SLNP DRL FS+ W ++ G++ + W GR+VI+SCCKL+YEHAQ I D
Sbjct: 751 ILCEQLCSLNPDEDRLTFSVVWKMSEKGEIYEEWFGRSVIKSCCKLAYEHAQGFIEQPDK 810
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF- 467
++ +E P + +F + +L+++++ L+ R GALRL+ K F
Sbjct: 811 EWAIEE-------LPPISEKFSVQQIKERTLNLHKIAQNLRKNRAESGALRLDQVKLQFC 863
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
L DE G P + ++D N L EEFMLLAN A + FP ALLRRHP P + +
Sbjct: 864 LNDETGLPNGYSIYQQKDSNRLVEEFMLLANMAVAHKTHKTFPQKALLRRHPPPKSKMME 923
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 587
+ C G+ +D +SS +SL + +L++ ++PMQ A YFC+G
Sbjct: 924 DLRDLCKCLGVPIDITSSQTLQRSLWSYLGNDEFSAARMQVLVSMCSKPMQNALYFCTGC 983
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHRE 647
+D+ + HYAL P+YTHFTSP+RRY D++VHRTL+A L Y ++ P +++
Sbjct: 984 LEDEELYRHYALNVPLYTHFTSPIRRYADVLVHRTLSAVLG----YTPEIKLSPVEINKQ 1039
Query: 648 GVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKD 707
++ CN++K + V++
Sbjct: 1040 ALQ--------------------------------------------CNEKKTNSKRVQE 1055
Query: 708 ACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETT 767
V LY + +K+ A V+ + + I+I K + +R+Y D+++ +L+
Sbjct: 1056 MSVDLYFSVFVKEAGPFEERAMVMGVYDKSFDIFILKFGVSKRVYTDKLDIKDKTFLKEQ 1115
Query: 768 STLVLSL 774
VL+L
Sbjct: 1116 KESVLTL 1122
>gi|440799389|gb|ELR20441.1| RNB family domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 1400
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 222/606 (36%), Positives = 322/606 (53%), Gaps = 80/606 (13%)
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
Y P + P+++V VK L SI E + L ++ W S P+ ++
Sbjct: 493 YAFFVPLEKRMPRILVPVKRLSASIINHPNE----LTTNLFVCKLTGWPASSGHPRGELI 548
Query: 227 HVFGRGGEVEPQINAILYENAICCS-GFSPESLSCLPCVP-----WEVPQEELLSRKDLR 280
G G++E ++ +L +N I F+PE ++CLP +P WE+P EE ++RKDLR
Sbjct: 549 KNMGPSGDMEVELRVLLQDNNIDWEDSFAPEVVACLPRIPPAPARWEIPAEEFITRKDLR 608
Query: 281 NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVY 340
IFTIDP+TA D+DDA+S +RL DG VGVHIADV+YFV P T LD +A++R+T+VY
Sbjct: 609 KERIFTIDPATAKDMDDAVSCKRLPDGTYLVGVHIADVTYFVKPDTPLDEDAKMRATTVY 668
Query: 341 MLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSY 399
M+ R IPMLP LLS+ + SL PG DRL+FS+ W ++ G+V++ W GRT+IRSC K+SY
Sbjct: 669 MVHRSIPMLPRLLSDNMCSLVPGEDRLSFSVTWKMDKEGNVLEEPWFGRTIIRSCVKMSY 728
Query: 400 EHAQDIIDGKFD----------------VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
E AQ+++D +F V+ + + E ++V +K L
Sbjct: 729 EAAQEMLDDRFSPPSAEPPAPEAAAKPVVKRGSVFAKDLTAPEHTVE--EIVDDVKVLNA 786
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+++ L+ KRF DG+L L+++K F D+ P D + R +FL EEFMLLANK+ A+
Sbjct: 787 MAESLRKKRFEDGSLTLDDAKMYFCLDDDKMPIDVGVYVRTASHFLIEEFMLLANKSVAK 846
Query: 504 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 563
I A+PD ALLRRHPAPN KL EF + CS + + DTSSS F +SL D
Sbjct: 847 RIHSAYPDRALLRRHPAPNDNKLAEFISMCSANSISFDTSSSKGFQRSLLALSSLPNPD- 905
Query: 564 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
+ ++ A +PM +A Y C+ + + + HYALAF YTHFTSP+RRY D++VHR L
Sbjct: 906 -IAAVVTRLAMKPMSVAKYTCTDEEAGEGAYRHYALAFDHYTHFTSPIRRYADVIVHRLL 964
Query: 624 NAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVP 683
+A L+ LP LE E
Sbjct: 965 DACLQG----------LPA-----------------------PLEKEE------------ 979
Query: 684 CADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIE 743
L ++ +CN RK +D C +++ LLK EA V+ + R +Y+
Sbjct: 980 ----LSDICDNCNMRKTKADKAQDKCDLVFLCTLLKNHPPKDLEATVITVNSRSFEVYVP 1035
Query: 744 KLAIER 749
+E+
Sbjct: 1036 LYGVEK 1041
>gi|308810501|ref|XP_003082559.1| Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS)
[Ostreococcus tauri]
gi|116061028|emb|CAL56416.1| Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS)
[Ostreococcus tauri]
Length = 609
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 212/527 (40%), Positives = 297/527 (56%), Gaps = 44/527 (8%)
Query: 240 NAILYENAICCSGFSPESLSCLPCVP----WEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
I+ E+ I FS ++ +CLP V W++P EE+ RKD R +F+IDP TA DL
Sbjct: 3 KVIVDEHRIVSEDFSAQAEACLPKVQPREHWKIPAEEMKKRKDFREKLVFSIDPPTARDL 62
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS+E + +G RVGVHIADVS+FVLP TALD EA+ R+T+ Y++ PMLP LL E
Sbjct: 63 DDALSVEVMPEGTLRVGVHIADVSHFVLPDTALDEEARQRATTTYLVHTIFPMLPRLLCE 122
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+ SLNPGV+RL+FS+ W + G V R VI+S KLSY H Q++ID D +
Sbjct: 123 NLCSLNPGVERLSFSVEWVMTREGMVKRVSFTRGVIKSAAKLSYIHVQNVIDAGSDTTKA 182
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTP 475
+ L G DV+ SI L +K ++ +RF GA+RL+ K F ++ P
Sbjct: 183 KDALQDI-DLSGNHTLDDVIESISILNSTAKAMRKRRFEAGAVRLDQPKIGFELNDDLEP 241
Query: 476 YDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSK 535
++ D N L EEFMLLAN A+ IA FP A+LR HP PN RKL E F +
Sbjct: 242 VNAEPYVIRDSNRLVEEFMLLANMYVAQYIATIFPSHAMLRCHPPPNERKLEELYTFAKE 301
Query: 536 HGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWG 595
H + +D SSS + HQSL +D +F+I+ AT+PMQLA YFC+G D+ W
Sbjct: 302 HDIDIDVSSSRRLHQSLSAIANGSRD---VFNIVQLLATKPMQLAKYFCTGTI-DEEHWH 357
Query: 596 HYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLT 655
HYALA P YTHFTSP+RRYPD++VHR L AA+E
Sbjct: 358 HYALAAPFYTHFTSPIRRYPDIIVHRLLAAAIE--------------------------- 390
Query: 656 GIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMW 715
+D+D +ES+ E + ++G+ ++ VA HCNDRKLA + ++ L++
Sbjct: 391 ---HDRDDSESVVVAELVE----RHGLLPPEVCSGVANHCNDRKLAAKYAQERSQHLFLC 443
Query: 716 ILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVE 762
L+K L++ A V LG +++ Y+ E +IY ++ ++V+
Sbjct: 444 KYLQKNH-LVARAIVRQLGVQYVIAYLPSYGFEIKIYLEKQRHVVVK 489
>gi|390369809|ref|XP_794209.3| PREDICTED: DIS3-like exonuclease 2-like, partial
[Strongylocentrotus purpuratus]
Length = 817
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 216/598 (36%), Positives = 317/598 (53%), Gaps = 58/598 (9%)
Query: 161 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPF 220
S P + PT + P++ + K+ P + +R ++ T L A+I +W S F
Sbjct: 213 SNPRAPDVMFAPTDHRVPRIYIPRKECPATFSQRPQDYANT----LFIAQIIDWPRISAF 268
Query: 221 PQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VPWEVPQEELLSRKDL 279
+ H+L+ G+ GEVE + A+L E+ I S F+ E L LP PW +P EEL R+DL
Sbjct: 269 AKGHLLYSIGQAGEVEAETTAMLIEHGIDSSEFTTEVLEDLPKERPWRIPAEELSQRRDL 328
Query: 280 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 339
R+ CIFTIDP+TA DLDDAL + L DGI +GVHIADVSYFV T+LD A R+TSV
Sbjct: 329 RSECIFTIDPTTARDLDDALHCKALGDGIYEMGVHIADVSYFVKEDTSLDKTASHRATSV 388
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 399
Y++Q+ IPMLP LL EE+ SLNP +RL S W + G+++ W GR+VIRSC KLSY
Sbjct: 389 YLVQKVIPMLPRLLCEELCSLNPDQERLTMSFIWRMTEEGEILQEWCGRSVIRSCVKLSY 448
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
HAQD+I+ + L P++ F ++V +++ ++ +++ L+ KRF GALR
Sbjct: 449 LHAQDMIENWEEKGDDIVL----PEITNGFGRNEVAQAVLNMQKIASNLRKKRFDGGALR 504
Query: 460 LENSKPVF-LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
L+ K + L E P + ++D N L EEFMLLAN AA I +A P A LRRH
Sbjct: 505 LDQVKLQYSLNAETTLPNGYSVYQQKDSNRLVEEFMLLANMAAAHRIFKAEPQRAFLRRH 564
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 578
P P + + + C GL +D +++G+ SL + + L +L ++PMQ
Sbjct: 565 PPPKEKMMDDLATLCESLGLDMDGTTAGKLQASLNRYCTSEEQAKCLLKVLTVLYSKPMQ 624
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRR 638
A YFC +D+ + HYAL P+YTHFTSP+RRYPD++VHR L ++L + +
Sbjct: 625 KARYFCCASLEDEEMYRHYALNVPLYTHFTSPIRRYPDILVHRMLASSLACGPVMERD-- 682
Query: 639 MLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDR 698
P+ R+ +R CND
Sbjct: 683 --PERLQRQAMR--------------------------------------------CNDA 696
Query: 699 KLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
K + + V D L+ +K+ L+ +A V+A+ R + I L +R+Y + +
Sbjct: 697 KDSAKEVSDKSSDLFFCQFVKECGPLVEKAIVMAVLDRSFDVLIINLGQVKRVYCNAI 754
>gi|291239348|ref|XP_002739585.1| PREDICTED: CG16940-like [Saccoglossus kowalevskii]
Length = 1031
Score = 365 bits (936), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 214/603 (35%), Positives = 321/603 (53%), Gaps = 64/603 (10%)
Query: 153 AKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARID 212
A N +L D + P + P++ V + PD +R GD L ARI
Sbjct: 423 ATGNLKTLPEKDTQDALFCPIDHRLPRIKVPLAQCPDGFIQR--PGD--FSNVLFVARIT 478
Query: 213 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE 272
+W E+S F +V G G++EP+ L EN + S FS + + + + + + E
Sbjct: 479 DWPEDSGFATGYVARSLGEAGQIEPETEGFLIENGVDFSEFSDQVCFHINFI-FGIEEXE 537
Query: 273 LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEA 332
L R+DLR CIFTIDP+TA DLDDAL + L DG +GVHIADVSYF+ GT LD A
Sbjct: 538 L--RRDLRQECIFTIDPATARDLDDALHCKPLGDGNYEIGVHIADVSYFLQEGTELDSVA 595
Query: 333 QVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR 392
R+TSVY++Q+ IPMLP LL E++ SLNP DRL FS+ W ++ G ++D WIGR+VI
Sbjct: 596 SFRATSVYLVQKVIPMLPRLLCEQLCSLNPAEDRLTFSVIWKISEEGKILDEWIGRSVIS 655
Query: 393 SCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 452
SC K++Y+HAQ II+ + +++ L P + ++ SD+V+ + +L++V+ L+ +R
Sbjct: 656 SCVKMTYQHAQGIIEEPDRIWNTDEL----PDIIPRYNISDIVQGVLNLHKVAMNLRKQR 711
Query: 453 FTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 511
F DGALRL+ K F + E G P + ++D N L EEFMLLAN A I ++FP
Sbjct: 712 FDDGALRLDQPKLAFTINRESGLPNGCSVYEQKDSNRLVEEFMLLANMAVAHRIYKSFPT 771
Query: 512 SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY--VLFDIL 569
+LLRRHP P + + + C + GL ++ +++G SL+ + DDY IL
Sbjct: 772 KSLLRRHPPPKSKMIDDVVVTCKRMGLHINAATAGDLQSSLK--KYYADDDYSKSRSQIL 829
Query: 570 INYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
+ ++PMQ+A YFC+G D+ D+ HYAL P YTHFTSP+RRY D+VVHR L L+
Sbjct: 830 VQLCSKPMQMAKYFCTGFIADENDYRHYALNVPFYTHFTSPIRRYADVVVHRLLAQCLDC 889
Query: 630 EKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILV 689
+ + K + R
Sbjct: 890 GPEVKSDKTEIQKQSER------------------------------------------- 906
Query: 690 NVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIER 749
CNDRK A + V++ +L+ + +K+ + + V+A+ + + + I K + +
Sbjct: 907 -----CNDRKTASKRVQELSGELFFSVFIKECGPIDEKGMVMAVLDQSVDVLILKFGVIK 961
Query: 750 RIY 752
R+Y
Sbjct: 962 RVY 964
>gi|303276508|ref|XP_003057548.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461900|gb|EEH59193.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 494
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 219/562 (38%), Positives = 308/562 (54%), Gaps = 78/562 (13%)
Query: 206 LVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC-SGFSPESLSCLPCV 264
LV+A+I W+ + +P A ++ + G +E A++ E+AI FS ++++CLP V
Sbjct: 1 LVSAKITRWSAGAVYPHAALIEILGEANALETVTAALIAEHAILGPDDFSADAIACLPEV 60
Query: 265 P-------WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 317
P WEVP EE +R+D + +IDP TA DLDDAL DG+ VGVHIAD
Sbjct: 61 PDRASGERWEVPSEERATRRDFTKVRVASIDPPTARDLDDALHATMRDDGVLVVGVHIAD 120
Query: 318 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 377
VS+FV P +ALD EA R+TS Y +Q+ +PMLP LL +++ SLNPGV+RL FS+ W++
Sbjct: 121 VSHFVTPNSALDKEAGRRATSTYFVQKVMPMLPRLLCDDLCSLNPGVERLTFSVEWEMTP 180
Query: 378 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 437
G V+ W GR VIRSC KL Y AQ + +N G P+ V +
Sbjct: 181 DGVVLSEWFGRGVIRSCAKLDYGTAQSVA-----AADANDPGAWDPRA--------VAET 227
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 497
I L ++ ++ +RF +GALRL+ SK F D G P + + N L EEFMLLA
Sbjct: 228 IGLLSRAARGMRARRFQNGALRLDQSKLSFELDAAGQPSSAAAYVTREANQLVEEFMLLA 287
Query: 498 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 557
N T A IA A+PD ALLR HP P+ RK+++ E F ++ GL++D SSSG H+SL R
Sbjct: 288 NTTVATFIASAYPDRALLRCHPEPDERKVKQLETFAAERGLRVDASSSGALHRSLTALRA 347
Query: 558 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
D Y + +L AT PMQLA YFC+G +D+ WGHYALAF YTHFTSP+RRYPD+
Sbjct: 348 SNPDGYEVAKLL---ATLPMQLARYFCTGK-QDEETWGHYALAFERYTHFTSPIRRYPDV 403
Query: 618 VVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAA 677
VVHR + AAL+A G +GR + ++ +GR
Sbjct: 404 VVHRIVAAALDA------------------GFKGR-------RANRSDDGDGR------- 431
Query: 678 LKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRF 737
CN+RKLA + ++ + Y+ L+ ++S V A+G ++
Sbjct: 432 -----------------CNERKLAAKAAQEGSIHAYLCAFLRTTPKVVS-GIVRAVGKKY 473
Query: 738 MTIYIEKLAIERRIYYDEVEGL 759
+ Y+ +E R+ +EGL
Sbjct: 474 LLAYVPTYGMEVRV---RLEGL 492
>gi|393907052|gb|EFO20496.2| hypothetical protein LOAG_07994 [Loa loa]
Length = 969
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 218/599 (36%), Positives = 317/599 (52%), Gaps = 66/599 (11%)
Query: 164 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 223
+R + +P + P+M++ + P S R ++ I + AR+ EW + F +
Sbjct: 345 NRNWALFSPGDSRMPRMMIPAEQTPASFFDRPQDFAKFIYV----ARMVEWQATAQFARG 400
Query: 224 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP---CVPWEVPQEELLSRKDLR 280
+ G G++E + +L N + FS +LS LP V W++ ++E RKD R
Sbjct: 401 KLYKSLGMAGDIEAETEGLLLANDVDTREFSQAALSSLPITEAVEWKIDEKEFKYRKDFR 460
Query: 281 NFCIFTIDPSTATDLDDALSIERLSD--GIS----RVGVHIADVSYFVLPGTALDIEAQV 334
+ +FTIDPSTA DLDDAL I+ +SD G+ +GVHIADVS+FV GT LD A
Sbjct: 461 DETVFTIDPSTARDLDDALHIKPISDCDGVGNPGWEIGVHIADVSHFVQFGTELDHWAFS 520
Query: 335 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 394
R TSVY++ + IPMLP +L EE+ SLNP VDRL FS+ W +N G++ D W GRT+IRSC
Sbjct: 521 RGTSVYLVHKVIPMLPQILCEELCSLNPDVDRLTFSVVWKVNDQGEIFDEWFGRTIIRSC 580
Query: 395 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 454
CKLSYE+AQD I + + P+++ + +V ++ L++++ IL+ KRF
Sbjct: 581 CKLSYEYAQDFIANP----EKDFIPSELPKIFNGKKSDEVKEAVLRLHKIAFILRKKRFE 636
Query: 455 DGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 513
+G+L L+ K F DE G P + R++ NFL EEFMLLAN A I AFP +A
Sbjct: 637 NGSLYLDVPKLSFTLDETSGMPNGLSVGERKEANFLVEEFMLLANIAVARKIESAFPKTA 696
Query: 514 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 573
LLRRHP P ++ LR+ C K G +D SSS SL++ + + +L +
Sbjct: 697 LLRRHPPPKIKMLRDILEKCEKVGFAVDGSSSATISSSLQKYEGDNELKRTVVQMLTHLL 756
Query: 574 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
+ MQLA YFC G K+ D+ HYAL+ P YTHFTSP+RRYPD++VHR L+AAL
Sbjct: 757 MKSMQLALYFCVGSLKNRADYAHYALSVPFYTHFTSPIRRYPDIMVHRFLSAAL------ 810
Query: 634 WKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVAT 693
A L +E ++ A+
Sbjct: 811 --------------------------GYSPAPGLTVKEVETI----------------AS 828
Query: 694 HCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
HCNDRKL R V +A ++ + +K+ L A V+ + + + K + +R+Y
Sbjct: 829 HCNDRKLTARTVSEASDDMFFGVFIKECGPLTERAVVIQVLDASFDVLVVKYGVVKRVY 887
>gi|427792415|gb|JAA61659.1| Putative exosomal 3'-5' exoribonuclease complex subunit, partial
[Rhipicephalus pulchellus]
Length = 1397
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 213/597 (35%), Positives = 322/597 (53%), Gaps = 63/597 (10%)
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
++ +P ++P+++V ++ P S +R A L A + +W ++ FP +
Sbjct: 775 WVLFSPRDARFPRLMVPAQECPPSFFQR----PADFSHTLFLAELVKWLPDANFPLGRIR 830
Query: 227 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP-WEVPQEELLSRKDLRNFCIF 285
+ G G + + NA+L I F P L L W+VP+EEL R+D R +F
Sbjct: 831 QLLGPAGSIPVETNAMLESYNIDHQEFPPGILDDLGVTTDWKVPEEELSGRRDFREELVF 890
Query: 286 TIDPSTATDLDDALSIERL--SDGISR----VGVHIADVSYFVLPGTALDIEAQVRSTSV 339
T+DP TA DLDDA+S RL ++G +R VGVHIADVS FV PGT LD AQ R+TSV
Sbjct: 891 TVDPKTARDLDDAISCRRLVVAEGDTRELWEVGVHIADVSRFVRPGTQLDQVAQKRATSV 950
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 399
Y++++ IPMLP LL + + SL+PG D+L FS+ W L S G V+ W GR++IRSCCKLSY
Sbjct: 951 YLVEQVIPMLPRLLCDHLCSLHPGEDKLTFSVVWTLTSDGRVLSEWFGRSIIRSCCKLSY 1010
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
EHAQD++D D + GE P+++G+ +++ ++ L +++ ++ +RF GALR
Sbjct: 1011 EHAQDLLD---DPDRERAPGE-LPEVFGKHTMAEIAECLRVLRGMTESMRRRRFDGGALR 1066
Query: 460 LENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 519
L+ K +F E PY + + + L EE MLLAN A + +AFP+ A LR HP
Sbjct: 1067 LDQVKVIFSLGENFQPYGISVYEHTESHRLIEELMLLANMAVAHRLYKAFPEEAFLRSHP 1126
Query: 520 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 579
P+ +L E EA CS +G+ LDT+S+G SL + ++L + ++PM++
Sbjct: 1127 PPDDAQLVEVEALCSAYGVPLDTTSAGTLQASLNAMVGTDELSQAKLNVLTHMLSKPMKM 1186
Query: 580 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRM 639
A YFC+G +D + HYAL P+YTHFTSP+RRY D+VVHR L AAL
Sbjct: 1187 AVYFCAGRREDPFSFSHYALNVPLYTHFTSPIRRYADIVVHRQLAAALGC---------- 1236
Query: 640 LPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRK 699
G +T LS + L+ +VA HCND K
Sbjct: 1237 -----------GPAVT-----------------LSASELQ----------SVADHCNDNK 1258
Query: 700 LACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
R V++ L++ +++ L +A V+A+ + + + +R+Y D++
Sbjct: 1259 YKARTVQELSTDLFLHAFVEQCGSLEDKAMVVAVLEHAFDVLALSVGMVKRVYCDKL 1315
>gi|427795403|gb|JAA63153.1| Putative exosomal 3'-5' exoribonuclease complex subunit, partial
[Rhipicephalus pulchellus]
Length = 1432
Score = 362 bits (930), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 213/597 (35%), Positives = 322/597 (53%), Gaps = 63/597 (10%)
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
++ +P ++P+++V ++ P S +R A L A + +W ++ FP +
Sbjct: 810 WVLFSPRDARFPRLMVPAQECPPSFFQR----PADFSHTLFLAELVKWLPDANFPLGRIR 865
Query: 227 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP-WEVPQEELLSRKDLRNFCIF 285
+ G G + + NA+L I F P L L W+VP+EEL R+D R +F
Sbjct: 866 QLLGPAGSIPVETNAMLESYNIDHQEFPPGILDDLGVTTDWKVPEEELSGRRDFREELVF 925
Query: 286 TIDPSTATDLDDALSIERL--SDGISR----VGVHIADVSYFVLPGTALDIEAQVRSTSV 339
T+DP TA DLDDA+S RL ++G +R VGVHIADVS FV PGT LD AQ R+TSV
Sbjct: 926 TVDPKTARDLDDAISCRRLVVAEGDTRELWEVGVHIADVSRFVRPGTQLDQVAQKRATSV 985
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 399
Y++++ IPMLP LL + + SL+PG D+L FS+ W L S G V+ W GR++IRSCCKLSY
Sbjct: 986 YLVEQVIPMLPRLLCDHLCSLHPGEDKLTFSVVWTLTSDGRVLSEWFGRSIIRSCCKLSY 1045
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
EHAQD++D D + GE P+++G+ +++ ++ L +++ ++ +RF GALR
Sbjct: 1046 EHAQDLLD---DPDRERAPGE-LPEVFGKHTMAEIAECLRVLRGMTESMRRRRFDGGALR 1101
Query: 460 LENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 519
L+ K +F E PY + + + L EE MLLAN A + +AFP+ A LR HP
Sbjct: 1102 LDQVKVIFSLGENFQPYGISVYEHTESHRLIEELMLLANMAVAHRLYKAFPEEAFLRSHP 1161
Query: 520 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 579
P+ +L E EA CS +G+ LDT+S+G SL + ++L + ++PM++
Sbjct: 1162 PPDDAQLVEVEALCSAYGVPLDTTSAGTLQASLNAMVGTDELSQAKLNVLTHMLSKPMKM 1221
Query: 580 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRM 639
A YFC+G +D + HYAL P+YTHFTSP+RRY D+VVHR L AAL
Sbjct: 1222 AVYFCAGRREDPFSFSHYALNVPLYTHFTSPIRRYADIVVHRQLAAALGC---------- 1271
Query: 640 LPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRK 699
G +T LS + L+ +VA HCND K
Sbjct: 1272 -----------GPAVT-----------------LSASELQ----------SVADHCNDNK 1293
Query: 700 LACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
R V++ L++ +++ L +A V+A+ + + + +R+Y D++
Sbjct: 1294 YKARTVQELSTDLFLHAFVEQCGSLEDKAMVVAVLEHAFDVLALSVGMVKRVYCDKL 1350
>gi|312082752|ref|XP_003143574.1| hypothetical protein LOAG_07994 [Loa loa]
Length = 954
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 218/599 (36%), Positives = 317/599 (52%), Gaps = 66/599 (11%)
Query: 164 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 223
+R + +P + P+M++ + P S R ++ I + AR+ EW + F +
Sbjct: 330 NRNWALFSPGDSRMPRMMIPAEQTPASFFDRPQDFAKFIYV----ARMVEWQATAQFARG 385
Query: 224 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP---CVPWEVPQEELLSRKDLR 280
+ G G++E + +L N + FS +LS LP V W++ ++E RKD R
Sbjct: 386 KLYKSLGMAGDIEAETEGLLLANDVDTREFSQAALSSLPITEAVEWKIDEKEFKYRKDFR 445
Query: 281 NFCIFTIDPSTATDLDDALSIERLSD--GIS----RVGVHIADVSYFVLPGTALDIEAQV 334
+ +FTIDPSTA DLDDAL I+ +SD G+ +GVHIADVS+FV GT LD A
Sbjct: 446 DETVFTIDPSTARDLDDALHIKPISDCDGVGNPGWEIGVHIADVSHFVQFGTELDHWAFS 505
Query: 335 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 394
R TSVY++ + IPMLP +L EE+ SLNP VDRL FS+ W +N G++ D W GRT+IRSC
Sbjct: 506 RGTSVYLVHKVIPMLPQILCEELCSLNPDVDRLTFSVVWKVNDQGEIFDEWFGRTIIRSC 565
Query: 395 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 454
CKLSYE+AQD I + + P+++ + +V ++ L++++ IL+ KRF
Sbjct: 566 CKLSYEYAQDFIANP----EKDFIPSELPKIFNGKKSDEVKEAVLRLHKIAFILRKKRFE 621
Query: 455 DGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 513
+G+L L+ K F DE G P + R++ NFL EEFMLLAN A I AFP +A
Sbjct: 622 NGSLYLDVPKLSFTLDETSGMPNGLSVGERKEANFLVEEFMLLANIAVARKIESAFPKTA 681
Query: 514 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA 573
LLRRHP P ++ LR+ C K G +D SSS SL++ + + +L +
Sbjct: 682 LLRRHPPPKIKMLRDILEKCEKVGFAVDGSSSATISSSLQKYEGDNELKRTVVQMLTHLL 741
Query: 574 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
+ MQLA YFC G K+ D+ HYAL+ P YTHFTSP+RRYPD++VHR L+AAL
Sbjct: 742 MKSMQLALYFCVGSLKNRADYAHYALSVPFYTHFTSPIRRYPDIMVHRFLSAAL------ 795
Query: 634 WKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVAT 693
A L +E ++ A+
Sbjct: 796 --------------------------GYSPAPGLTVKEVETI----------------AS 813
Query: 694 HCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
HCNDRKL R V +A ++ + +K+ L A V+ + + + K + +R+Y
Sbjct: 814 HCNDRKLTARTVSEASDDMFFGVFIKECGPLTERAVVIQVLDASFDVLVVKYGVVKRVY 872
>gi|427781907|gb|JAA56405.1| Putative exosomal 3'-5' exoribonuclease complex subunit
[Rhipicephalus pulchellus]
Length = 965
Score = 362 bits (928), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 213/597 (35%), Positives = 322/597 (53%), Gaps = 63/597 (10%)
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
++ +P ++P+++V ++ P S +R A L A + +W ++ FP +
Sbjct: 343 WVLFSPRDARFPRLMVPAQECPPSFFQR----PADFSHTLFLAELVKWLPDANFPLGRIR 398
Query: 227 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP-WEVPQEELLSRKDLRNFCIF 285
+ G G + + NA+L I F P L L W+VP+EEL R+D R +F
Sbjct: 399 QLLGPAGSIPVETNAMLESYNIDHQEFPPGILDDLGVTTDWKVPEEELSGRRDFREELVF 458
Query: 286 TIDPSTATDLDDALSIERL--SDGISR----VGVHIADVSYFVLPGTALDIEAQVRSTSV 339
T+DP TA DLDDA+S RL ++G +R VGVHIADVS FV PGT LD AQ R+TSV
Sbjct: 459 TVDPKTARDLDDAISCRRLVVAEGDTRELWEVGVHIADVSRFVRPGTQLDQVAQKRATSV 518
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 399
Y++++ IPMLP LL + + SL+PG D+L FS+ W L S G V+ W GR++IRSCCKLSY
Sbjct: 519 YLVEQVIPMLPRLLCDHLCSLHPGEDKLTFSVVWTLTSDGRVLSEWFGRSIIRSCCKLSY 578
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
EHAQD++D D + GE P+++G+ +++ ++ L +++ ++ +RF GALR
Sbjct: 579 EHAQDLLD---DPDRERAPGE-LPEVFGKHTMAEIAECLRVLRGMTESMRRRRFDGGALR 634
Query: 460 LENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 519
L+ K +F E PY + + + L EE MLLAN A + +AFP+ A LR HP
Sbjct: 635 LDQVKVIFSLGENFQPYGISVYEHTESHRLIEELMLLANMAVAHRLYKAFPEEAFLRSHP 694
Query: 520 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 579
P+ +L E EA CS +G+ LDT+S+G SL + ++L + ++PM++
Sbjct: 695 PPDDAQLVEVEALCSAYGVPLDTTSAGTLQASLNAMVGTDELSQAKLNVLTHMLSKPMKM 754
Query: 580 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRM 639
A YFC+G +D + HYAL P+YTHFTSP+RRY D+VVHR L AAL
Sbjct: 755 AVYFCAGRREDPFSFSHYALNVPLYTHFTSPIRRYADIVVHRQLAAALGC---------- 804
Query: 640 LPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRK 699
G +T LS + L+ +VA HCND K
Sbjct: 805 -----------GPAVT-----------------LSASELQ----------SVADHCNDNK 826
Query: 700 LACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
R V++ L++ +++ L +A V+A+ + + + +R+Y D++
Sbjct: 827 YKARTVQELSTDLFLHAFVEQCGSLEDKAMVVAVLEHAFDVLALSVGMVKRVYCDKL 883
>gi|198421184|ref|XP_002119190.1| PREDICTED: similar to DIS3 mitotic control homolog-like 2 [Ciona
intestinalis]
Length = 925
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 223/658 (33%), Positives = 324/658 (49%), Gaps = 78/658 (11%)
Query: 105 SAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF-NYKGGSRKDAKKNRSSLSVP 163
S + + R TG VV I+E+ R+ + G L +++ N K + + KN +L +P
Sbjct: 244 SPTVGKFNKTRKTGVVVGIVEKKSRQ-VVTGHLRLDKAKPNDKFITLETVSKNNQNLQIP 302
Query: 164 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 223
E ++ E+ I L +I +W SP P
Sbjct: 303 REEVMK--------------------------EKAKQDISNVLFVGKILKWEPHSPLPLG 336
Query: 224 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VPWEVPQEELLSRKDLRNF 282
+ G G++EP+ IL ++ + S FS CLP +PW +PQ E R+D +
Sbjct: 337 ELCQSIGEIGQIEPETTRILIDHEVDFSEFSNAVNQCLPSDLPWTIPQAERAKRRDFTSE 396
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
CIF+IDP +A DLDDAL ++L +G +GVHIADVSYFV PGTALD A R TSVY++
Sbjct: 397 CIFSIDPPSARDLDDALHCKQLPNGTYEIGVHIADVSYFVHPGTALDKVASERCTSVYLV 456
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
QR IPMLP LL EE+ SLNPG +RLAFS+ W++ G ++ +W GR+VIRSC K SY+HA
Sbjct: 457 QRVIPMLPRLLCEELCSLNPGTERLAFSVVWNITEQGKILSQWFGRSVIRSCAKFSYDHA 516
Query: 403 QDIIDG---KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
Q ID F S +P++ G F +++ + L++VS+ L+ +R +GALR
Sbjct: 517 QSFIDNPDRDFSQPESACQENEFPEITGNFSMNEIKTKVLGLFKVSQNLRKQRIDNGALR 576
Query: 460 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
L+ + + + E G P + N L EEFMLLAN A + + P A LR H
Sbjct: 577 LDQVRLSYTLNSETGLPNGCYTYEYKKSNELIEEFMLLANMAVAHKLYTSIPTHAFLRSH 636
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 578
P +++F + C GL++D SSS +SL A + L A +P Q
Sbjct: 637 SEPKEEMMQDFVSTCMALGLEVDASSSEALAESLRTAPGADELAKYRKQALFLLAIKPQQ 696
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRR 638
LA+Y C+G D++ + HYAL P+YTHFTSP+RRY DLVVHR L A +
Sbjct: 697 LATYICAGSVSDESKYHHYALNVPLYTHFTSPIRRYADLVVHRQLAAVI----------- 745
Query: 639 MLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDR 698
+S E LS D L AT CN R
Sbjct: 746 ------------------------GEQSDEQMMNLST----------DELQAQATLCNHR 771
Query: 699 KLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
K + ++ + L+ +L+ L S V+ + R + I + + +R+Y +E+
Sbjct: 772 KSNAKQAQELSIDLFFNLLVNNFGPLESRGMVMNVLDRAVDILSTEYGVTKRVYLEEL 829
>gi|384487354|gb|EIE79534.1| hypothetical protein RO3G_04239 [Rhizopus delemar RA 99-880]
Length = 1168
Score = 360 bits (925), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 218/613 (35%), Positives = 320/613 (52%), Gaps = 76/613 (12%)
Query: 151 KDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAAR 210
KD KN S+ + + P + P M + ++ P I E +A LV R
Sbjct: 512 KDINKNSSTEKKNNIRMVWFKPIDKRVPLMGIPLRLAPPDIV----ENEAKYTNLLVVVR 567
Query: 211 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 270
I +W +S P + G G + + AIL +N I FS ++L LP PW + Q
Sbjct: 568 IQKWPIDSLTPLGAFVRELGHIGNIPAETEAILSDNGISEIPFSKKALKGLPPTPWSIEQ 627
Query: 271 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 330
E+ R+DLR+ IFTIDP+TA DLDDA+ + +L + VGVHIADVS+FV TALD
Sbjct: 628 AEINKRRDLRDTRIFTIDPATAKDLDDAVHVTKLDENEFEVGVHIADVSHFVKQHTALDH 687
Query: 331 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 390
EA R TS Y+ R IPMLP LL EE+ SLNPGVDRLAFS+ W ++ G++ + W G+TV
Sbjct: 688 EAFDRGTSTYLCDRVIPMLPSLLCEELCSLNPGVDRLAFSVIWKMDGVGNIKETWFGKTV 747
Query: 391 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY--GQFEWSDVVRSIKSLYEVSKIL 448
IRSC KLSY+ AQ +I+G G P+ + ++V + I L+ +SK +
Sbjct: 748 IRSCAKLSYDDAQSVIEGN-----------GLPETVTIKDHKSTEVEQDIIYLFNMSKKM 796
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
+++RF++GAL + + + F +E G PY+ + ++D N L EEFML AN + AE I
Sbjct: 797 RERRFSNGALSINSIRLSFKLNELGEPYEVSIYEQKDANRLIEEFMLRANMSVAEKITEH 856
Query: 509 FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 568
+P+ ALLR+H P+ + L EF G D+SS+G +S +D + +
Sbjct: 857 YPNEALLRQHSPPHEKSLNEFLKIAENLGYSFDSSSAGSLQESFNAIES--EDAKAVLKL 914
Query: 569 LINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
L A +PMQ A YFC+G F + T + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 915 L---AVKPMQRAKYFCTGSF-ETTKFRHYALNVPLYTHFTSPIRRFADIIVHRQLEAALL 970
Query: 629 AEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADIL 688
+K Y KD ++
Sbjct: 971 GKKT------------------------CSYKKD------------------------VV 982
Query: 689 VNVATHCNDRKLACRNVKDACVKLYM--WILLKKKEV---LLSEARVLALGPRFMTIYIE 743
A+HCN+RK +N +D ++LY+ ++ +KE ++ A V + I +
Sbjct: 983 QKTASHCNERKEGAKNSQDMNLQLYLTHYLYNLEKETGKHVICNAIVTQVLKDAFDILVP 1042
Query: 744 KLAIERRIYYDEV 756
+ +E+RI+ D +
Sbjct: 1043 EYGLEKRIHMDSI 1055
>gi|355684016|gb|AER97264.1| DIS3 mitotic control-like protein -like 2 [Mustela putorius furo]
Length = 509
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 203/490 (41%), Positives = 274/490 (55%), Gaps = 53/490 (10%)
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
+PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG VGVHIADVSYFV
Sbjct: 1 LPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVHIADVSYFVP 60
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ LD A R+TSVY++Q+ IPMLP LL EE+ SL+P D+L FS+ W L G ++
Sbjct: 61 EGSPLDKVAAERATSVYLVQKVIPMLPRLLCEELCSLHPMTDKLTFSVIWTLTPEGKILG 120
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
W GRT+IRSC KLSYEHAQ +I+ + L P + + +V R++ +L+
Sbjct: 121 EWFGRTIIRSCTKLSYEHAQSMIESPNEKIPEKEL----PPISPEHTSEEVHRAVLNLHG 176
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++K L+ +RF DGALRL+ K F D E G P + D N L EEFMLLAN A
Sbjct: 177 IAKELRKQRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVA 236
Query: 503 EVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
R FP+ ALLRRHP P + L + FC + GL +D SS+G ++SL K
Sbjct: 237 HKTHRTFPERALLRRHPPPQTKMLNDLVEFCEQLGLPMDFSSAGALNKSLTTTFGDDKYS 296
Query: 563 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
++L N +RPMQ+A YFCSG +D T + HYAL P+YTHFTSP+RR+ D++VHR
Sbjct: 297 LARKEVLTNMCSRPMQMALYFCSGMLRDQTQFRHYALNVPLYTHFTSPIRRFADVLVHRL 356
Query: 623 LNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGV 682
L AAL +L LE
Sbjct: 357 LAAALGCGEL--------------------------------PDLE-------------- 370
Query: 683 PCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYI 742
+ L A HCNDR++A + V++ L+ +L+K+ L SEA VL + + + +
Sbjct: 371 --PEALQKQADHCNDRRMASKRVQELSTGLFFAVLVKESGPLESEAMVLGVLNQAFDVLV 428
Query: 743 EKLAIERRIY 752
+ +++RIY
Sbjct: 429 LRYGVQKRIY 438
>gi|320164952|gb|EFW41851.1| DIS3-like exonuclease 2 [Capsaspora owczarzaki ATCC 30864]
Length = 1350
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 246/717 (34%), Positives = 349/717 (48%), Gaps = 116/717 (16%)
Query: 103 RLSAMISSYPTK--RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN---- 156
R + S P K +PTG VV I+E + R +VG L+ F K +++D ++
Sbjct: 520 RSAGNAKSVPDKFLQPTGNVVFILENNRRETPVVGQLSS---FKSKPPTKQDIIRHGGRS 576
Query: 157 --RSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEW 214
+ TP P+ P M V + D P+ + ++ + L +A++ +W
Sbjct: 577 AAAKASQSSTESRALFTPIDPRIPSMRVPLADCPEDLTSVPQK----YKDMLFSAKLTDW 632
Query: 215 NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP--------- 265
E S + VL + G G++ + AI E+ F P+ L+CLP V
Sbjct: 633 PENSSYASGKVLELLGPVGQIASETRAIRLEHHFEQERFEPKVLACLPSVAHPHATPTTE 692
Query: 266 --------------------------WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDAL 299
W VP+ EL +R+DLR+ IFTIDP TA DLDDAL
Sbjct: 693 LPKNSKAAQDPVDPEKTLPPGADPTGWVVPEAELQTRRDLRSTRIFTIDPPTARDLDDAL 752
Query: 300 SIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGS 359
I L+D + VGVHIADVSYFV G+ LD EA R+T+ Y++Q +PMLP LLSE + S
Sbjct: 753 HITPLADDLFEVGVHIADVSYFVKEGSRLDKEAAERATTCYLVQMVVPMLPGLLSEHLCS 812
Query: 360 LNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE------ 413
LNPG DRLAFS+ W +NSAG + D+WIGRTVIRSC K++Y+ AQ+I+D E
Sbjct: 813 LNPGTDRLAFSVIWKMNSAGVIQDQWIGRTVIRSCVKMNYDIAQEILDSDVTREWLYDDL 872
Query: 414 ------SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
++N G P L D+ +++L++V + L+ R + GALRL+ K F
Sbjct: 873 PDVFPLAANPTSAGVPVLPTAM---DIAGDVRNLWKVGQQLRAARASQGALRLDRVKLSF 929
Query: 468 LFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
D P + N L EEFMLLAN A I AFP+ +LLR H P+ KL
Sbjct: 930 TIDPNTKEPLSYGAYPIRESNKLVEEFMLLANMCTARRIFDAFPEQSLLRCHAPPHTSKL 989
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 586
E + G+ +D SS+G QSL A E+ +V+ ++ T PMQ A YFCSG
Sbjct: 990 AELAKDLRESGIPMDVSSAGALQQSL-LAIEQTHGTHVM-QVVQVLVTHPMQQAKYFCSG 1047
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 646
+ W HYAL P YTHFTSP+RRYPD++VHR L+ A
Sbjct: 1048 QQHREDFW-HYALNVPFYTHFTSPIRRYPDIIVHRLLDQA-------------------- 1086
Query: 647 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 706
+RG +DAA ++ L G +A+HCN RK RN +
Sbjct: 1087 --IRG---------QDAAS--------VISTLPLG--------KIASHCNTRKSDARNAQ 1119
Query: 707 DACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEW 763
+ +Y+ + +A VL + R I I +L +E RI+ ++++ W
Sbjct: 1120 ERSSAVYLCRFVASNGPFYLDAIVLDVKDRSFQIVIPELDLEERIFCEDLDISKFSW 1176
>gi|170582504|ref|XP_001896159.1| RNB-like protein [Brugia malayi]
gi|158596692|gb|EDP34994.1| RNB-like protein [Brugia malayi]
Length = 854
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 213/567 (37%), Positives = 300/567 (52%), Gaps = 70/567 (12%)
Query: 164 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 223
+R + +P + P+M++ + P + R ++ I AR+ EW + F +
Sbjct: 345 NRNWALFSPGDSRMPRMMIPAEQTPAAFFDRPQDFAKFI----YVARMVEWQATAQFARG 400
Query: 224 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP---CVPWEVPQEELLSRKDLR 280
+ G G++E + +L N + FS +LS LP V W++ ++E RKD R
Sbjct: 401 KLYKSLGLAGDIEAETEGLLLANDVDTREFSQAALSSLPITEAVEWKIDEKEFKYRKDFR 460
Query: 281 NFCIFTIDPSTATDLDDALSIERLS--DGIS----RVGVHIADVSYFVLPGTALDIEAQV 334
+ +FTIDP TA DLDDAL I+ ++ DG VGVHIADVS+FV GT LD A
Sbjct: 461 DETVFTIDPVTARDLDDALHIKPIANCDGAGNPGWEVGVHIADVSHFVQFGTELDHWAFN 520
Query: 335 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 394
R TSVY++ + IPMLP +L EE+ SLNP VDRL FS+ W +N G++ D W GRT+IRSC
Sbjct: 521 RGTSVYLVHKVIPMLPQMLCEELCSLNPDVDRLTFSVVWKINDQGEIFDEWFGRTIIRSC 580
Query: 395 CKLSYEHAQD-IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 453
CKLSYEHAQD I+ + D SS P+++ + +V ++ L +++ IL+ KRF
Sbjct: 581 CKLSYEHAQDFIVHPEKDFVSSEL-----PKIFNGKKSDEVKEAVLRLNKIAVILRKKRF 635
Query: 454 TDGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS 512
+G++ E K F DE G P LS E+ NFL EEFMLLAN A I +FP +
Sbjct: 636 ENGSINFEMPKLNFTLDETSGMPNGLCLS--EEANFLVEEFMLLANMAVARKIELSFPKT 693
Query: 513 ALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY 572
ALLRRHP P ++ LR+ C K G ++D SSS SL + + + +L
Sbjct: 694 ALLRRHPPPKIKMLRDILEKCEKVGFEIDGSSSATIASSLLKYEGNNELKRTVVQMLTYL 753
Query: 573 ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
+ MQLA YFC G K+ D+ HYAL+ P YTHFTSP+RRYPD++VHR L+AAL
Sbjct: 754 LMKSMQLALYFCVGSLKNRADYAHYALSVPFYTHFTSPIRRYPDIMVHRFLSAAL----- 808
Query: 633 YWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVA 692
A L +E ++ A
Sbjct: 809 ---------------------------GYSPAPGLTVKEVETI----------------A 825
Query: 693 THCNDRKLACRNVKDACVKLYMWILLK 719
+HCNDRKL + V +A ++ + +K
Sbjct: 826 SHCNDRKLTAKTVSEASDDMFFGVFIK 852
>gi|221123214|ref|XP_002154262.1| PREDICTED: DIS3-like exonuclease 2-like [Hydra magnipapillata]
Length = 797
Score = 356 bits (913), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 235/703 (33%), Positives = 350/703 (49%), Gaps = 82/703 (11%)
Query: 59 SEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQN--DGMNAIERLSAMISSYPTKRP 116
S YN+ I EG + N P + E + S NA + S ++ +
Sbjct: 65 SADYNERDILLEGVSSRNRALPGDVVAVELIPQSLTKVIHENNAEKNTSEILVNETNNVK 124
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 176
G+VV IIE+ R GF+ NY+ + ++P +
Sbjct: 125 RGKVVFIIEKKHPRVA-TGFI-----MNYRSNKFG---------------FAYMSPVDSR 163
Query: 177 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 236
P++++ ++ P R ++ T L ARI EW + F ++ G G +E
Sbjct: 164 LPRILIPLQQCPPLFLTRPQDFCKT----LFVARIIEWEIDMGFAYGELMRSLGEAGNIE 219
Query: 237 PQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
+ +I+ NAI S F + ++CLP W + EE RKDLR CIFTIDP+TA DL
Sbjct: 220 AETESIIAANAIDSSPFGEDIIACLPNGDSWSIKPEEFKKRKDLREECIFTIDPATARDL 279
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDA+S +++ D + VGVHIADVS+F+ + LDI A+ R+TSVY+ Q+ IPMLP +L E
Sbjct: 280 DDAVSCKKIGDDLFEVGVHIADVSFFIEEESKLDIAAKSRATSVYLCQKVIPMLPAVLCE 339
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+ SLNPGVDRLA+S+ W++ S G V+ W GR+VIRSC KLSY HAQ +I+ D S
Sbjct: 340 RLCSLNPGVDRLAYSVIWNMRSDGTVLTEWFGRSVIRSCVKLSYTHAQQLIETGTD---S 396
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
+ E +P + G F V I L+++S+ L+ +RF GALR++ K F D E G
Sbjct: 397 DLKKEEFPIVEG-FSLEKVRDVIHCLFKISQNLRKRRFDSGALRIDQPKLSFNLDSETGL 455
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + +D N L EEFMLLAN I A PD A+LR HPAP+ L+E + CS
Sbjct: 456 PNGCSVYEYKDSNRLIEEFMLLANMAVGRKIYAAHPDQAILRNHPAPHPIMLQEVQRICS 515
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY-ATRPMQLASYFCSGDFKDDTD 593
+ + D S S +SL + D + + + +P Q A+YFC+G D++
Sbjct: 516 AYSIFFDISDSSSISKSLTNLSQLESDSRMFIEAAVTMLCAKPFQNATYFCTGTVDDESL 575
Query: 594 WGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRF 653
+ HYAL P+YTHFTSP+RRYPD++VHR L AAL
Sbjct: 576 YRHYALNVPIYTHFTSPIRRYPDILVHRLLTAAL-------------------------- 609
Query: 654 LTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLY 713
D+ ++GR L +A HCN+RK + + ++
Sbjct: 610 --------DSTFKVKGRPKQ--------------LQAIADHCNERKWTAKKASEQSSDVF 647
Query: 714 MWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
I +K+ + V+A+ + + + +L + +R+Y D++
Sbjct: 648 FAIYVKECGPFEEKGVVVAVLDKSIDVLCIRLGVVKRVYCDKL 690
>gi|388579460|gb|EIM19783.1| RNB-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 1250
Score = 355 bits (910), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 218/670 (32%), Positives = 349/670 (52%), Gaps = 78/670 (11%)
Query: 118 GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE--------Y 167
G VV+I+ER P + G +G L + + ++DA++ +P +
Sbjct: 510 GHVVAIVERMPGQLFSGTLGILRPS---SAATKEKQDAERREREGGIPQAQEKPTQKPKI 566
Query: 168 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 227
+ PT + P + + + P ++ E+ + E+ A I W S P ++
Sbjct: 567 VWFKPTDKRVPLIAIPTEQAPKDFLEKSED----YQNEIFVACIKRWPITSLHPFGTLVE 622
Query: 228 VFGRGGEVEPQINAILYENAICCS-GFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 286
G G+VE + +A+L ++ C S FS L CLP +PW +P++E ++R+DLRN FT
Sbjct: 623 KLGTIGDVEVETSALLKDSNACFSEDFSENVLKCLPSLPWSIPEQEYMNRRDLRNERTFT 682
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP TA DLDDA+SI+ DG + V IADVSYF+ P +ALD +A+ R+TSVY++QR +
Sbjct: 683 IDPDTAKDLDDAVSIKLNEDGTYDITVSIADVSYFIKPNSALDKDARKRATSVYLVQRAV 742
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
PMLP +LS ++ SL P +RLAFS+ + + V+ W GRT+I+SC +LSY++AQ++I
Sbjct: 743 PMLPSVLSSDLCSLLPDKERLAFSVTFTMTKDAKVIKTWYGRTIIKSCAQLSYQNAQNVI 802
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
+GK +L +L ++ IK L+++S+ L+ +RF +GAL++++ K
Sbjct: 803 EGK-------SLDAAKEKLSDLHSSDEIEGDIKVLFDLSRKLRQRRFDNGALKIDSMKLS 855
Query: 467 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
F D+ G P D V + N L EEFMLL N + A IA P+ +LLRRH P RKL
Sbjct: 856 FQLDDNGVPIDCVAYQSREANNLIEEFMLLTNMSVASQIAVNLPEQSLLRRHEDPIDRKL 915
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 586
F+ G +D SSSG +S ++ K+ + +L A + M A YFCSG
Sbjct: 916 EGFKERAKDLGFDMDISSSGALQKSFSDIKD--KEASSMLQVL---AVKGMCRAKYFCSG 970
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 646
D + + HYAL P+YTHFTSP+RRY D++VHR L+ L+
Sbjct: 971 AI-DISAYKHYALNVPLYTHFTSPIRRYADVIVHRQLDTVLQ------------------ 1011
Query: 647 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 706
+ +DA K+G + + +A CN +K A + +
Sbjct: 1012 ------------FGEDAEN-------------KFGTGERETIAKIAQQCNIKKDASKQAQ 1046
Query: 707 DACVKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVE 762
++ LY+ +L+ ++ ++ +A V+ + R + + + IE+R++ D++ E
Sbjct: 1047 ESSQHLYLCLLISDLTRRYGPVVRQATVIGVLDRAFDVLVNDMGIEKRVHVDKIPVDNSE 1106
Query: 763 WLETTSTLVL 772
+ E TL L
Sbjct: 1107 FNEEEKTLDL 1116
>gi|443895203|dbj|GAC72549.1| exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3
[Pseudozyma antarctica T-34]
Length = 1399
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 221/651 (33%), Positives = 329/651 (50%), Gaps = 77/651 (11%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVNQWFNY-KGGSRKDAKKNRSSLS---VPDREYIQL 170
G VV+I+ERSP + G +G L + K + + ++ S+L+ P + I
Sbjct: 653 AGHVVAIVERSPGQLFSGTLGLLRPSSAATKEKQQAERVQREGVSALAPEVKPRPKIIWF 712
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
PT + P + + P++ EEG + L A I W S P ++ G
Sbjct: 713 RPTDKRVPLIAIPADQAPENFWA--EEGQESFNSRLFVACIKRWPITSLHPFGALVEEIG 770
Query: 231 RGGEVEPQINAILYEN-AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 289
G VE + A+L + + F+ +L CLP +PW++P++E +RKD R+ +FTIDP
Sbjct: 771 VIGNVEAETQALLKDTLSSATEAFTEGALKCLPPLPWKIPEKEYETRKDFRSNRVFTIDP 830
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
TA DLDDA+ + RL +G VGVHIADVS+FV G++LD EA+ R TSVY++QR IPML
Sbjct: 831 ETAKDLDDAVHVVRLDNGNFEVGVHIADVSHFVKLGSSLDREARKRGTSVYLVQRAIPML 890
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P LSEE+ SL PGV+RL FS + +N V+ W G+++IRSC KL+Y AQ +I+G
Sbjct: 891 PPTLSEELCSLVPGVERLTFSAVFTMNKDAQVLSSWFGKSIIRSCAKLAYADAQKVIEG- 949
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
GE + D+ I L+++++ ++ +RF GALR++N K F
Sbjct: 950 ---------GELPKDKIKEHTSKDIADDILVLHQLAQKMRARRFEGGALRIDNVKLSFRL 1000
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE G P D+ + D + L EEFMLLAN + A+ IA PD ALLRRH P R+L F
Sbjct: 1001 DEDGLPTDAGIYSSYDAHRLIEEFMLLANLSVAQQIAAGLPDLALLRRHEKPLDRRLEGF 1060
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G ++D SS G H+SL + +KDD L T M A YFC+G
Sbjct: 1061 VRRAKSMGYEIDISSGGALHRSLRE----IKDDSAR-QALQALVTNAMMKAKYFCTG-MV 1114
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
D + HYAL P+YTHFTSP+RRY DL+VHR L L +
Sbjct: 1115 DIAKYQHYALNVPLYTHFTSPIRRYADLMVHRQLETVLAGQD------------------ 1156
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
K+GV + + +A CN +K A + ++
Sbjct: 1157 -----------------------------KFGV-DREAMAKIAQQCNVKKDAAKLAQEQS 1186
Query: 710 VKLYMWILLKKKEV----LLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
L++ +L+ + ++ A V+ + + + + IE+R++ D++
Sbjct: 1187 AHLFLCLLIHDLTMRYGPVVRPATVMGVLDAAFDVIVPEFGIEKRVHVDQM 1237
>gi|343427099|emb|CBQ70627.1| related to SSD1 protein [Sporisorium reilianum SRZ2]
Length = 1399
Score = 345 bits (886), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 219/651 (33%), Positives = 323/651 (49%), Gaps = 77/651 (11%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD----REYIQL 170
G VV+I+ERSP + G +G L + + + ++ +S P+ + I
Sbjct: 663 AGHVVAIVERSPGQLFSGTLGLLRPSSAATKEKQQAERVQREGASALAPEVKPRPKIIWF 722
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
PT + P + + P+ EEG + L A I W S P ++ G
Sbjct: 723 RPTDKRVPLIAIPADQAPEDFWA--EEGQDSFNSRLFVACIKRWPITSLHPFGALVEEIG 780
Query: 231 RGGEVEPQINAILYEN-AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 289
G VE + A+L + + F+ +L CLP +PW++P++E +RKD R+ +FTIDP
Sbjct: 781 VIGNVEAETQALLKDTLSSATEAFTEGALKCLPPLPWKIPEKEFETRKDFRSHRVFTIDP 840
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
TA DLDDA+ + RL +G VGVHIADVS+FV G++LD EA+ R TSVY++QR IPML
Sbjct: 841 ETAKDLDDAVHVVRLDNGNFEVGVHIADVSHFVKLGSSLDREARKRGTSVYLVQRAIPML 900
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P LSEE+ SL P V+RL FS + +N VV W G+T+I+SC KL+Y AQ +I+G
Sbjct: 901 PPTLSEELCSLVPDVERLTFSAVFTMNKDAQVVSSWFGKTIIKSCAKLAYADAQKVIEG- 959
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
GE + +D+ I L+++++ ++ +RF GALR++N K F
Sbjct: 960 ---------GELPKDKIKAHQPNDIADDILILHKLAQKMRARRFDTGALRIDNVKLSFKL 1010
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE G P D+ + D + L EEFML AN A+ IA PD ALLRRH P R+L F
Sbjct: 1011 DENGLPTDASIYSSYDAHRLIEEFMLQANIAVAQQIAAGLPDLALLRRHEKPLDRRLEGF 1070
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +D SS G H+SL++ +KDD L T M A YFC+G
Sbjct: 1071 LRRAKSMGHDIDISSGGSLHRSLKE----VKDDSAR-QALQALVTNAMMKAKYFCTG-MV 1124
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
D + HYAL PVYTHFTSP+RRY DL+VHR L A L + + R + K
Sbjct: 1125 DIAKYHHYALNVPVYTHFTSPIRRYADLMVHRQLEAVLAEQDKFPVDREAMAK------- 1177
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+A CN +K A + ++
Sbjct: 1178 -----------------------------------------IAQQCNVKKDAAKLAQEQS 1196
Query: 710 VKLYMWILLKKKEV----LLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
L++ +L+ + ++ A V+ + + + + IE+R++ D++
Sbjct: 1197 AHLFLCLLIHDLTMRYGPVVRSATVMGVLDAAFDVIVPEFGIEKRVHVDQM 1247
>gi|340372983|ref|XP_003385023.1| PREDICTED: DIS3-like exonuclease 2-like [Amphimedon queenslandica]
Length = 803
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 225/644 (34%), Positives = 326/644 (50%), Gaps = 88/644 (13%)
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 176
T +VV II+ S RR G+ + FN G +P +
Sbjct: 168 TAKVVYIIQASGRR-AAAGYFKI---FNKSLG------------------LALFSPRDSR 205
Query: 177 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 236
P+ VV + LP+ ++ E L RI +W PFP +L G G++
Sbjct: 206 QPRTVVPLSCLPEDYASNHKK----YEKSLFICRIKDWKITDPFPTGELLRSIGEAGDIV 261
Query: 237 PQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLSRKDLRNFCIFTIDPSTATD 294
P+ +IL E I F P + LP V W +PQ+EL R+D R+ C+FTIDPSTA D
Sbjct: 262 PETESILTEYDIDTDEFPPAATESLPLVNGQWTIPQDELAKRRDFRSDCVFTIDPSTARD 321
Query: 295 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 354
LDDA+ + LS+G+ +GVHIADVSYFV PGT LD A R+TSVY++Q IPMLP +L
Sbjct: 322 LDDAIHCKSLSNGVFELGVHIADVSYFVRPGTLLDKMASERATSVYLVQNVIPMLPRILC 381
Query: 355 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG-KFDVE 413
EE+ SLNP DRL FS+ W L G+++D W+GR++I S KLSYE AQ +ID +F +
Sbjct: 382 EELCSLNPQQDRLTFSVVWKLTEKGELLDEWMGRSIIHSKAKLSYEDAQKMIDDPQFSWQ 441
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDE-Y 472
S+ +P + SD+V S+ L +++K L+ R T G+LRL+ K VF D
Sbjct: 442 HSD-----FPCIPVTEVISDIVESVNRLNKITKRLRFLRQTRGSLRLDQPKLVFNIDSGT 496
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
G P + ++ N + EE MLLAN A I+ FP+ ALLRRHP P + +
Sbjct: 497 GLPNGCHIYQHKESNKMIEECMLLANMAVAHKISETFPELALLRRHPPPKGKAIEHLRDQ 556
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD----ILINYATRPMQLASYFCSGDF 588
+ G+Q + S++ +SL + K K+ + +L++ R M+LA YFC+ +
Sbjct: 557 FNLLGVQFECSTAADIQKSLNRYISKGKEGDKKLEMEKLVLVSLCCRAMELAHYFCTSVY 616
Query: 589 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREG 648
K++ + HYAL P YTHFTSP+RRYPD++VHR L AAL E
Sbjct: 617 KEE-QFRHYALNVPRYTHFTSPIRRYPDIIVHRLLAAALGEED----------------- 658
Query: 649 VRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDA 708
A KY P DI + A HCN ++ + ++
Sbjct: 659 ----------------------------APKYLPP--DI-EDFANHCNKKRKNAKTAEEL 687
Query: 709 CVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
L++ + ++K + E V A+ + + + +L I +RIY
Sbjct: 688 SSSLFLGVFIRKCGPIDQEGIVCAVLDKSFDVLLPELGIIKRIY 731
>gi|353237108|emb|CCA69089.1| related to SSD1 protein [Piriformospora indica DSM 11827]
Length = 1466
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 224/660 (33%), Positives = 330/660 (50%), Gaps = 91/660 (13%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDR 165
G VV+++ER P + G +G L + + G R D R P
Sbjct: 723 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGDEGAKRVPTERP-- 780
Query: 166 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 225
+ + PT + P + + + P +E +A + VA I S P +
Sbjct: 781 KIVWFKPTDKRVPLIAIPTEQAPSDF---VENAEAYADRLFVAC-IKRHPISSLHPFGTL 836
Query: 226 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 285
+ G G+VE + +A+L + F+ L CLP +PW +P+ E +RKDLR+ IF
Sbjct: 837 VEELGPIGDVEVETSALLKDCNFPTEDFTENVLKCLPPLPWSIPEHEYKTRKDLRDTRIF 896
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
+IDP TA D+DDALSI + DG VGVHIADVSYFV P TALD +A+ RSTSVY++QR
Sbjct: 897 SIDPPTARDIDDALSITKNDDGTYEVGVHIADVSYFVKPNTALDRDARKRSTSVYLVQRA 956
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 405
+PMLP LSEE+ SL G +RLAFS+ + L V+ +W GRT+I+S KL+Y+HAQ +
Sbjct: 957 VPMLPPALSEELCSLLAGQERLAFSVIFTLTEDARVIKKWFGRTIIKSAAKLAYDHAQSV 1016
Query: 406 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
IDGK E T G + S + I L+++++ L+ +RF +G LR+E +K
Sbjct: 1017 IDGKGLPEVPITPGH---------DASAIAGDIALLHKLAQHLRQRRFQNGTLRIEENKL 1067
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
+F DE G D N L EEFMLLAN A+ IA P+ ALLRRH P R+
Sbjct: 1068 MFTLDENGVATDCYNYNFTAANALIEEFMLLANFAVAQQIAVNLPEQALLRRHDEPLERR 1127
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLE-----QAREKLKDDYVLFDILINYATRPMQLA 580
L F ++ G ++D SS+G +S + AR +L+ A + M A
Sbjct: 1128 LNAFAERAARLGYEMDISSAGALQRSFDAITNPDARRQLE----------GLAVKAMHRA 1177
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRML 640
YFC+G D + HYAL P+YTHFTSP+RRYPD++VHR L+A L
Sbjct: 1178 KYFCAG-MLDIAKYQHYALNAPLYTHFTSPIRRYPDILVHRQLDAIL------------T 1224
Query: 641 PKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKL 700
P +N I + D D + VA HCN +K
Sbjct: 1225 PVDNE-----------IKFSMD----------------------RDSVAKVAQHCNIKKD 1251
Query: 701 ACRNVKDACVKLYMWI----LLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+ ++ L++ + L ++ ++ +ARV+ + + + + IE+R++ D++
Sbjct: 1252 MAKLAQEQSAHLFLCLFISDLTQRYGPVIRQARVVGVLDAAFDVIVPEFGIEKRVHIDQI 1311
>gi|71005402|ref|XP_757367.1| hypothetical protein UM01220.1 [Ustilago maydis 521]
gi|46096594|gb|EAK81827.1| hypothetical protein UM01220.1 [Ustilago maydis 521]
Length = 1423
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 220/651 (33%), Positives = 326/651 (50%), Gaps = 77/651 (11%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD----REYIQL 170
G VV+I+ERSP + G +G L + + + ++ +S P+ + I
Sbjct: 692 AGHVVAIVERSPGQLFSGTLGLLRPSSAATKEKQQAERVQREGASALAPEVKPRPKIIWF 751
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
PT + P + + P+ EEG + L A I W S P ++ G
Sbjct: 752 RPTDKRVPLIAIPADQAPEDFWA--EEGQESFNSRLFVACIKRWPITSLHPFGALVEEIG 809
Query: 231 RGGEVEPQINAILYEN-AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 289
G VE + A+L + + F+ +L CLP +PW++P++E +R+D R+ +FTIDP
Sbjct: 810 VIGNVEAETQALLKDTLSSATEAFTEGALKCLPPLPWKIPEKEYKTRRDFRSHRVFTIDP 869
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
TA DLDDA+ + RL +G VGVHIADVS+FV G++LD EA+ R TSVY++QR IPML
Sbjct: 870 ETAKDLDDAVHVVRLDNGNFEVGVHIADVSHFVKLGSSLDREARKRGTSVYLVQRAIPML 929
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P LSEE+ SL P V+RLAFS + +N V+ W G+++I+SC KL+Y AQ +I+G
Sbjct: 930 PPTLSEELCSLVPNVERLAFSAVFTMNKDAQVISSWFGKSIIKSCAKLAYADAQKVIEG- 988
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
S L P+ G I L+++++ ++ +RF GALR++N K F
Sbjct: 989 -GQLSKEKLEAHRPKEIGD--------DILILHQLAQKMRARRFKTGALRIDNVKLSFKL 1039
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE G P D+ + D + L EEFML AN A+ IA P+ ALLRRH P R+L F
Sbjct: 1040 DENGLPTDASVYCSYDAHRLIEEFMLQANMAVAQQIAAGLPELALLRRHEKPLDRRLDGF 1099
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DTSS G H+SL K+KDD L T+ M A YFC+G
Sbjct: 1100 LRRAKSMGYDIDTSSGGALHRSL----AKIKDDSAR-QALQALVTKSMMQAKYFCTG-MV 1153
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
D + HYAL P+YTHFTSP+RRY DL+VHR L A L
Sbjct: 1154 DIAKYHHYALNVPLYTHFTSPIRRYADLMVHRQLEAVL---------------------- 1191
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
V K+GV + + +A CN +K A + ++
Sbjct: 1192 -------------------------VEQDKFGVD-REAMAKIAQQCNVKKDAAKMAQEQS 1225
Query: 710 VKLYMWILLKKKEV----LLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
L++ +L+ + ++ A V+ + + + + IE+R++ D++
Sbjct: 1226 AHLFLCLLIHDLTMRYGPVVRSATVMGVLDAAFDVIVPEFGIEKRVHVDQM 1276
>gi|358053914|dbj|GAA99943.1| hypothetical protein E5Q_06646 [Mixia osmundae IAM 14324]
Length = 1562
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 225/661 (34%), Positives = 343/661 (51%), Gaps = 87/661 (13%)
Query: 115 RPT--GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDA-KKNRSSLSVPDREYIQ 169
+PT G VV++I R P + G +G L + + ++DA K+ R + V D +
Sbjct: 828 KPTYAGHVVAVISRQPGQLFSGQLGLLRPSSAATKE---KQDAEKRERDGIDVRDDHRQK 884
Query: 170 -------LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQ 222
PT + P + + V D+P+ DA L A I W S P
Sbjct: 885 EKPKICWFKPTDKRVPLVAIPVSDVPEDF---CANPDA-YSSRLFVACIKRWPITSLHPF 940
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNF 282
+++ G G++E + AIL +N + F+ L CLP VP + + E +RKD R
Sbjct: 941 GTLVNELGPIGDIETETQAILADNNVAAEPFAEVVLKCLPPVPT-ISEAECDARKDYRQE 999
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
+FTIDP TA DLDDA+ I +L DG VG+HIADVS++V P TALD EA+ R+TSVY++
Sbjct: 1000 TVFTIDPITAKDLDDAVHIRQLEDGNFEVGIHIADVSHYVKPNTALDREARRRATSVYLV 1059
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
Q+ IPMLP LSE + SL D+L FS+ +L G V++ W G+TVIRSC +L+Y A
Sbjct: 1060 QKVIPMLPAALSETLCSLRANEDKLTFSVVLNLTPDGKVINTWFGKTVIRSCSQLAYSFA 1119
Query: 403 QDIIDGKF---DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
Q++I+G+ D + SN S+V SI+ L +++ L+ +R G+LR
Sbjct: 1120 QEVIEGRPLPDDAKISNGKSR-----------SEVEESIRLLDTLAQKLRARRSDQGSLR 1168
Query: 460 LENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 519
++N K F D+ G+P D R N L EEFMLLAN + A +A P+ AL RRH
Sbjct: 1169 VDNIKLYFALDDRGSPVDCDAIVRRASNELIEEFMLLANTSVAIKVANGLPEQALCRRHE 1228
Query: 520 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 579
P R+L FEA GL LDTSS+G +S + ++K ++L +L+ + M+
Sbjct: 1229 GPVERRLTAFEAKVEAMGLTLDTSSAGALQRSFDAIKDKDAASHLLTQLLV---VKTMKQ 1285
Query: 580 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRM 639
A YFC+G D + + HYAL +YTHFTSP+RRY D++VHR L A L
Sbjct: 1286 AEYFCTG-LLDISKYLHYALNVELYTHFTSPIRRYADVLVHRQLEAVLLG---------- 1334
Query: 640 LPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRK 699
+ A +K+GV A+ + +A CN ++
Sbjct: 1335 ----------------------------------ATADIKFGVD-AEGVGQIAQQCNVKR 1359
Query: 700 LACRNVKDACVKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDE 755
A ++ ++A LY+ +L+ +K ++ A V+A+ + +++ + IE+R++ D+
Sbjct: 1360 SAAKSAQEASQHLYLCMLISELTQKYGPVVRPANVVAVLDQAFDVFVPEFGIEKRVHIDQ 1419
Query: 756 V 756
+
Sbjct: 1420 M 1420
>gi|324500855|gb|ADY40390.1| Ribonuclease [Ascaris suum]
Length = 1192
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 200/607 (32%), Positives = 309/607 (50%), Gaps = 72/607 (11%)
Query: 164 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 223
+R + +P + P+M++ +P +R ++ I AA + EW + F +
Sbjct: 565 NRNWALFSPGDSRMPRMMIPADQMPAGFFERPQDFSKYI----FAAHMVEWQATAQFARG 620
Query: 224 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC---VPWEVPQEELLSRKDLR 280
+ G G++E + +L N + FS +LS LP V W + ++E R+D R
Sbjct: 621 KLYKSLGLAGDIEAETEGLLLANDVDTREFSAAALSSLPITEEVEWTIDEKEFKYRRDFR 680
Query: 281 NFCIFTIDPSTATDLDDALSIERLSDGIS------RVGVHIADVSYFVLPGTALDIEAQV 334
+ TIDP TA DLDDAL I+ + D VGVHIADVS+FV GT LD A
Sbjct: 681 EETVVTIDPLTARDLDDALHIKPIDDCDGAGTPGWEVGVHIADVSHFVQAGTELDHWATS 740
Query: 335 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 394
R+TSVY++ + IPMLP +L E++ SLNPG DRL FS+ W +N +V + W GR++IRSC
Sbjct: 741 RATSVYLVHKVIPMLPRILCEDICSLNPGKDRLTFSVVWKMNDKAEVFEEWFGRSIIRSC 800
Query: 395 CKLSYEHAQDIIDG---KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDK 451
CKL+YEHAQD ID +FD P++ + S++ + L ++++IL+ +
Sbjct: 801 CKLAYEHAQDFIDNPEKEFDKAE-------LPEILNNKKSSEIKELVLRLNKLAEILRAR 853
Query: 452 RFTDGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFP 510
R ++G L+L+ K F+ +E G P + R++ + L EEFMLLAN A I FP
Sbjct: 854 RSSEGCLQLDQPKLCFVLNETSGLPDAVAIYERKEAHKLVEEFMLLANMAVARKIEHEFP 913
Query: 511 DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILI 570
++LLRRHP P ++ LR+ C G +D SSS SL + + + +L
Sbjct: 914 RTSLLRRHPPPKIKVLRDILERCENIGFAVDGSSSATIASSLRKYEGNDELKRTIVQVLS 973
Query: 571 NYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
+ + MQLA YFC+G K +++ HYAL+ P YTHFTSP+RRY D++VHR L+AAL
Sbjct: 974 HLLMKSMQLALYFCTGTMKSVSEYAHYALSVPYYTHFTSPIRRYADVMVHRLLSAAL--- 1030
Query: 631 KLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVN 690
L+V L D+L N
Sbjct: 1031 -----------------------------------GYSPAPTLTVKEL-------DVLAN 1048
Query: 691 VATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERR 750
HCND+K+ + + ++ ++ + +K+ A VL + + I + + +R
Sbjct: 1049 ---HCNDKKVTAKAISESSDDMFFGVFVKEHGPFTERAVVLMILDASFDVLIIRYGVVKR 1105
Query: 751 IYYDEVE 757
+Y + ++
Sbjct: 1106 VYVNRLK 1112
>gi|388851815|emb|CCF54621.1| related to SSD1 protein [Ustilago hordei]
Length = 1397
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 214/651 (32%), Positives = 321/651 (49%), Gaps = 77/651 (11%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD----REYIQL 170
G VV+I+ERSP + G + L + + + +++ P+ + I
Sbjct: 658 AGHVVAIVERSPGQLFSGTLAMLRPSSAATKEKQQAERVQRDGPGALAPEVKPRPKIIWF 717
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
PT + P + + P+ EEG + L A I W S P ++ G
Sbjct: 718 RPTDKRVPLIAIPADQAPEDFWA--EEGQESFNSRLFVACIKRWPITSLHPFGALVEEIG 775
Query: 231 RGGEVEPQINAILYEN-AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 289
G VE + A+L + + FS +L CLP +PW++P+ E +R+D R+ +FTIDP
Sbjct: 776 VIGNVEAETQALLKDTLSSATEVFSEGALKCLPPMPWKIPEREYETRRDFRSLRVFTIDP 835
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
TA DLDDA+ + RL +G VGVHI DVS+FV G++LD EA+ R TSVY++QR IPML
Sbjct: 836 ETAKDLDDAVHVVRLGNGQYEVGVHITDVSHFVKLGSSLDREARKRGTSVYLVQRVIPML 895
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P LSEE+ SL PGV+RL FS + +N V+ W G++VIRSC +L+Y AQ +I+G
Sbjct: 896 PPTLSEELCSLVPGVERLTFSAVFTMNKDAQVIKSWFGKSVIRSCAQLAYADAQKVIEG- 954
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
GE + + +++ I L+++++ ++ +RF GALR++N K F
Sbjct: 955 ---------GELPKDKIKEHKSNEIADDILILHKLAQKMRARRFETGALRIDNVKLSFRL 1005
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE G P D+ + D + L EEFML AN A+ IA PD ALLRRH P R+L F
Sbjct: 1006 DENGLPTDASIYSSYDAHRLIEEFMLQANMAVAQQIAAGLPDLALLRRHEKPLDRRLEGF 1065
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
+ G ++D SS G H+SL + +KDD L T M A YFC+G
Sbjct: 1066 LSRAKSMGYEIDISSGGALHRSLRE----IKDDNAR-QALQALVTNAMMKAKYFCTG-MV 1119
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
D + HYAL P+YTHFTSP RRY DL+VHR L A L + + R + K
Sbjct: 1120 DIAKYHHYALNVPLYTHFTSPSRRYADLMVHRQLEAVLADQDKFPFDRETMAK------- 1172
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+A CN +K A + ++
Sbjct: 1173 -----------------------------------------IAQQCNVKKDAAKLAQEQS 1191
Query: 710 VKLYMWILLKKKEV----LLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
L++ +L+ + ++ A V+ + + + + IE+R++ D++
Sbjct: 1192 AHLFLCLLIHDLTLRYGPVVRPATVMGVLDAAFDVIVPEFGIEKRVHVDQM 1242
>gi|449683222|ref|XP_002154285.2| PREDICTED: DIS3-like exonuclease 2-like, partial [Hydra
magnipapillata]
Length = 730
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 189/466 (40%), Positives = 279/466 (59%), Gaps = 14/466 (3%)
Query: 170 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
+ PT +P +++ +K+ P D I + L+ E L A+I W++ + ++
Sbjct: 112 MFPTDSSFPIIMLPLKNFPKDFIDRPLD-----FEKSLFLAKITNWDQNLYYACGKLVSF 166
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV-PWEVPQEELLSRKDLRNFCIFTI 287
G G VE + AI+ +N I + F + L LP W +P EEL R DLR CIFTI
Sbjct: 167 LGESGSVEAETEAIIKKNLIYDTPFPKKCLKTLPQKNTWCIPSEELNKRSDLRKECIFTI 226
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DPSTA DLDDALS ++++D + VGVHIADVSYFV +ALD AQ+R+TSVY+ Q+ IP
Sbjct: 227 DPSTARDLDDALSCKKIADDLYEVGVHIADVSYFVKENSALDKVAQLRATSVYLTQKVIP 286
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 407
MLP +LSE++ SLNPGVDRLA+S+ +++ S G +++ RTVI S KL+Y AQ +I+
Sbjct: 287 MLPSILSEDLCSLNPGVDRLAYSVIFNIKSDGTIINEKFVRTVICSQVKLTYCQAQQLIE 346
Query: 408 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
+ + + +P++YG F ++ S+ +L+++SK L+ +R GA+ + +F
Sbjct: 347 NQL---TDYLITNDFPKIYGGFTLENIKDSLYTLFQISKNLRKQRHNAGAISYNLPEIIF 403
Query: 468 -LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
L +E P L +D N L EEFMLLAN + A I A P A+LRRHP PN +
Sbjct: 404 NLNEEKDKPIGLSLYKYKDSNKLIEEFMLLANMSVARKIYEAHPKKAVLRRHPPPNQIMM 463
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLF--DILINYATRPMQLASYFC 584
+ + L D S+ ++SLE+ L+++ F ++ T+P LASYFC
Sbjct: 464 EDLAKLFQLYELDFDLGSNQSINKSLEKL-SGLENELKTFLEPAIVLMLTKPFLLASYFC 522
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
SG ++ D+ HY L P+YTHFTSP+RRYPD++VHR L AAL+++
Sbjct: 523 SGAVTNEQDFHHYGLNVPLYTHFTSPIRRYPDILVHRCLTAALDSK 568
>gi|321453433|gb|EFX64669.1| hypothetical protein DAPPUDRAFT_229774 [Daphnia pulex]
Length = 911
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 193/455 (42%), Positives = 267/455 (58%), Gaps = 22/455 (4%)
Query: 206 LVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP 265
L ARID W E+ P + + G+ G++E + A+L E+ + F E LP +P
Sbjct: 344 LYLARIDSW-EDVNHPLGSLCYFIGKSGDIEAETIALLLEHEVDYGDFPQEVFDDLPSLP 402
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALS---IERLSDGISR---VGVHIADVS 319
W +P EE+ R+D R CIFTIDP+ A DLDDA+S ++ DGI+R V VHIADVS
Sbjct: 403 WSIPTEEIKKRRDFREQCIFTIDPADARDLDDAVSGRFLKMADDGITRLYRVSVHIADVS 462
Query: 320 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 379
+FV T LD A R+TS Y++ R IPMLP +L E V SLNPG DRLAFS+ W +N G
Sbjct: 463 FFVQDNTVLDGIASRRATSTYLVDRVIPMLPSVLCEHVCSLNPGEDRLAFSVEWIVNDKG 522
Query: 380 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 439
++++ W GR++IRSC KLSY+HAQ +I+ D E N P++ + +++ +I
Sbjct: 523 EILEEWFGRSIIRSCVKLSYDHAQAVIE---DREIVNC-----PEIKEPYSVAEIRETIL 574
Query: 440 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 498
L E++ L+ KR GALR++ + F D E TP + ++ N L EEFMLLAN
Sbjct: 575 VLQELAGYLRKKRVDQGALRIDLPRLAFSMDWETRTPIGFRVYELKESNRLIEEFMLLAN 634
Query: 499 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
AE I FP A+LR HP P KL + G+ LD +SS +SL + +
Sbjct: 635 MRVAEKIYGVFPALAVLRSHPPPPGHKLEQLADTLQTIGIHLDVTSSATLQESLLRYGQG 694
Query: 559 LKDDYVLFDILI--NYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 616
D + L+ N +PM+ ASY CSG K + + HYAL+ P YTHFTSP+RRYPD
Sbjct: 695 SSDPISMGRNLVISNLLAKPMKCASYICSGVVKKEEKFRHYALSVPFYTHFTSPIRRYPD 754
Query: 617 LVVHRTLNAALEAEKL-YWKH---RRMLPKNNHRE 647
++VHR L+AALE E L +W+ +R+L N R+
Sbjct: 755 ILVHRLLDAALEQESLDHWEQSVVKRLLDNCNSRK 789
>gi|170090966|ref|XP_001876705.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648198|gb|EDR12441.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1129
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 210/558 (37%), Positives = 304/558 (54%), Gaps = 38/558 (6%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDR 165
G VV+++ER P + G +G L + + G R D + R + P
Sbjct: 383 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGDEPR-RGPIERP-- 439
Query: 166 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 225
+ + PT + P + + + P ++ +A ++ +L A I S P +
Sbjct: 440 KIVWFKPTDKRVPLIAIPTEQAPPDF---VQNSEAYVD-KLFVACIKRHPISSLHPFGTL 495
Query: 226 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 285
+ G G++E + +A+L + FS + CLP +PW +P ELLSRKDLR +F
Sbjct: 496 VEELGPIGDIEVETSALLKDCNFPTEDFSENVMKCLPPMPWTLPDHELLSRKDLRGERLF 555
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
T+DP+TA DLDDA+S++ + DG VG+HIADVS+FV P TALD +A+ R+TSVY++QR
Sbjct: 556 TVDPATAKDLDDAVSVKHMEDGTYEVGIHIADVSFFVKPNTALDRDARKRATSVYLVQRS 615
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 405
+PMLP LSE++ SL PG DRLAFS+ + +N+ V+ +W G+TVIRS KL+YE AQ++
Sbjct: 616 VPMLPPALSEQLCSLVPGQDRLAFSVIFTMNNDAKVLKKWFGKTVIRSAAKLTYEDAQNL 675
Query: 406 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
IDG SN G + +W + +K L ++K L+ +RF +GAL LE+
Sbjct: 676 IDG------SNV---GGIVVGPDHQWGAIQSDVKLLQSLAKKLRTQRFRNGALSLESLSL 726
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
F D+ G P D R D N++ EEFMLL N + IA P+ ALLRRH P R+
Sbjct: 727 SFKLDDNGLPVDCGQYERCDANYMIEEFMLLTNIVVGQHIAVHLPEQALLRRHDTPIERR 786
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
L F + G +DTSSSG +S + DD +L + + Q A YFC+
Sbjct: 787 LSTFTQRAERLGFNMDTSSSGALMRSFDAI-----DDPTARRLLELLSFKATQRAKYFCA 841
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE--AEKLYWKHRRMLPKN 643
G D + HYAL P+YTHFTSP+RRY D++VHR L + L+ AE + R + K
Sbjct: 842 G-MLDIAKYSHYALNTPLYTHFTSPIRRYADVLVHRQLESILQGGAEPKFTMDRDAVAKV 900
Query: 644 NHREGVRGRFLTGIFYDK 661
+ + LTG FY K
Sbjct: 901 AQQCNM---LLTGSFYSK 915
>gi|328860922|gb|EGG10026.1| hypothetical protein MELLADRAFT_42233 [Melampsora larici-populina
98AG31]
Length = 900
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 217/656 (33%), Positives = 326/656 (49%), Gaps = 74/656 (11%)
Query: 114 KRP--TGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE--- 166
+RP G +V+++ER P + G +G L + + + ++ L RE
Sbjct: 150 QRPNFAGHIVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGVDLRGGQREEQR 209
Query: 167 --YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
+ PT + P + + V P + +T L A I W S P
Sbjct: 210 PKIVWHRPTDKRVPLIAIPVDQAPADFLADPNKYAST----LFIAGIKRWPITSLHPFGT 265
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCI 284
++ G G++E + NA+L + FS + CLP VPW +P E R+D R+ +
Sbjct: 266 LVEELGPIGDIEVETNALLKDCNFSSEEFSENVVRCLPPVPWTIPDREYEVRRDFRSQTV 325
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
FTIDP TA DLDDAL + + DG VGVHIADV++FV P TALD EA+ R+T+VY++QR
Sbjct: 326 FTIDPETAKDLDDALHVTKNEDGTFDVGVHIADVTHFVKPNTALDREARKRATTVYLVQR 385
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+PMLP LSE++ SLNPG D+L FS+ + L S ++D W G++VI S KL Y AQ
Sbjct: 386 AVPMLPPSLSEQLCSLNPGQDKLTFSVVFKLTSDAKIIDTWFGKSVICSAAKLHYSQAQT 445
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
++ + N E + G + + + S++ L ++S+ L+ +RF +G LR+++ K
Sbjct: 446 MLSDQ------NAAPELKIEKNG-VQVAQIYESVRMLGQLSRQLRKRRFEEGTLRIDSIK 498
Query: 465 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 524
F DE G P D +S + N L EEFMLLAN A+ +A P+ A LRRH AP R
Sbjct: 499 LNFKLDEGGLPDDCQISISTEANQLVEEFMLLANIAVAKKVAAGLPEQAFLRRHEAPIDR 558
Query: 525 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 584
+L F K G +DTSS+G +S E + + + +L AT+ M A YFC
Sbjct: 559 RLEAFVKKAKKSGFDVDTSSAGSLMKSFEAIEVVGRAPHFVMQLL---ATKAMVKAKYFC 615
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNN 644
+G D W HYAL P+YTHFTSP+RR+ D++VHR L A L
Sbjct: 616 AGAL-DIAKWSHYALNIPLYTHFTSPIRRFADIMVHRQLEAVL----------------- 657
Query: 645 HREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRN 704
LS +K+ + D + A HCN ++ A R
Sbjct: 658 ----------------------------LSACDVKFSMD-PDTVSKSAQHCNVKRSAARL 688
Query: 705 VKDACVKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
++ L++ +L+ K ++ EA VL + + + AIE+R++ D++
Sbjct: 689 AEEQSQHLFLCLLIADLTAKYGPVVREATVLGVLNEAFDVAVPDFAIEKRVHVDQM 744
>gi|409050403|gb|EKM59880.1| hypothetical protein PHACADRAFT_250659 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1476
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 216/653 (33%), Positives = 333/653 (50%), Gaps = 77/653 (11%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLN-----VNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ 169
G VV+++ER P + G +G L + + R+ K + + + +
Sbjct: 739 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDKGDEPRRPIERPKIVW 798
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
PT + P + + + P + E T +L A I S P ++
Sbjct: 799 FKPTDKRVPLIAIPTEQAPPDFVQNSE----TYANKLFVACIKRHPISSLHPFGTLVEEL 854
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 289
G G++E + +A+L + F+ L CLP +PW +P+ E RKDLR IFTIDP
Sbjct: 855 GPIGDIEVETSALLKDCNFPTEDFTENVLKCLPPIPWTIPEREFEVRKDLRGERIFTIDP 914
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
+A DLDDA SI+ DG V VH+ADVS+FV P TALD +A+ R+TSVY++QR +PML
Sbjct: 915 DSAKDLDDAFSIKVNDDGTYDVSVHVADVSHFVKPNTALDRDARKRATSVYLIQRSVPML 974
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P LSE++ SL PG +RLAFS+ + + VV +W GRT+++S KLSY AQ++IDGK
Sbjct: 975 PPALSEQLCSLLPGQERLAFSVIFTMTKEAKVVKKWFGRTIVKSAAKLSYGDAQNVIDGK 1034
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
+GE + + D+ IK L +++K L+++RF +GA+ E+ F+
Sbjct: 1035 -------PIGEV--PVIPEHNAGDIAHDIKVLDDLAKQLRERRFQNGAIGGESYDLKFVL 1085
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE G P D V R + + L EEFML N A+ IA FP+ ALLRRH P R+L F
Sbjct: 1086 DEDGMPTDCVSYERTEAHSLVEEFMLATNIAVAQQIAVHFPEQALLRRHDNPLERRLNAF 1145
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV--LFDILINYATRPMQLASYFCSGD 587
+ G +DTSSSG +SL + D + + +IL+ +T Q A YFC+G
Sbjct: 1146 ADRAERLGYGMDTSSSGALMRSL----NAITDPAIRRIVEILLQKST---QRAKYFCAG- 1197
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHRE 647
D +GHY+L P+YTHFTSP+RRY D++VHR L++ L+
Sbjct: 1198 MLDIAKYGHYSLNVPLYTHFTSPIRRYADVLVHRQLDSILQV------------------ 1239
Query: 648 GVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKD 707
G G D+DA + VA CN ++ + R ++
Sbjct: 1240 GTPGE-APKFTMDRDA------------------------VAKVAQQCNIKQDSARLAQE 1274
Query: 708 ACVKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
L++ IL+ ++ ++ +A+V+ + +Y+ + +IE+R++ D++
Sbjct: 1275 QSTHLFLCILIHDLTQRYGPVIRQAKVVGVLDAAFDVYVPEFSIEKRVHVDQM 1327
>gi|169861161|ref|XP_001837215.1| SSD1 protein [Coprinopsis cinerea okayama7#130]
gi|116501937|gb|EAU84832.1| SSD1 protein [Coprinopsis cinerea okayama7#130]
Length = 1426
Score = 335 bits (858), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 218/653 (33%), Positives = 324/653 (49%), Gaps = 80/653 (12%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ----- 169
G VV+++ER P + G +G L + + + ++ P R I+
Sbjct: 689 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDKAEEPRRGPIERPKIV 748
Query: 170 -LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P + E +L A I S P ++
Sbjct: 749 WFKPTDKRVPLIAIPTEQAPPDFVQNSE----AYADKLFVACIKRHPISSLHPFGTLVEE 804
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTID 288
G G++E + +A+L + FS L CLP +PW +P+ E +RKDLR IFTID
Sbjct: 805 LGPIGDIEVETSALLKDCNFPTEEFSENVLKCLPPIPWTIPEHEFKTRKDLREERIFTID 864
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P TA DLDDALS++ DG +GVH+ADVS+FV P TALD +A+ R+TSVY++QR +PM
Sbjct: 865 PETAKDLDDALSVKANEDGTYDIGVHVADVSFFVKPNTALDRDARKRATSVYLVQRVVPM 924
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP LSE++ SL PG DRLAFS+ + +N V+ +W G+T++RS KLSY AQ++I+G
Sbjct: 925 LPPALSEQLCSLIPGEDRLAFSVIFTINKEAKVLKKWFGKTIVRSTAKLSYRDAQNVIEG 984
Query: 409 K-FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
K FD + G + SD+ IK L +SK L+ +RF +GAL LE+ K F
Sbjct: 985 KNFDAP-----------VGGNYNASDIEEDIKVLDSISKKLRAERFNNGALTLESLKLRF 1033
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
E G P D R D N L EEFMLLAN A+ IA P+ ALLRRH +P R++
Sbjct: 1034 TLGEDGLPTDCGEQERLDANALIEEFMLLANIAVAQQIAVHLPEQALLRRHDSPIERRMN 1093
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 587
F + G ++D SS+G +S D +L + + A YFC+G
Sbjct: 1094 TFLRRAERLGYKMDISSAGALMKSFNAI-----TDPTARKLLELVSFKATHRAKYFCAG- 1147
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHRE 647
D +GHYAL P+YTHFTSP+RRY D++VHR L A L+
Sbjct: 1148 MLDIAKYGHYALNVPLYTHFTSPIRRYADVLVHRQLEATLQG------------------ 1189
Query: 648 GVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKD 707
G +F D+DA + VA CN ++ + ++
Sbjct: 1190 GNDVKFT----MDRDA------------------------VAKVAQQCNIKRDSAILAEE 1221
Query: 708 ACVKLYMWILLK----KKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
L++ +L+ + ++ A+V+ + + I + IE+R++ D++
Sbjct: 1222 QSAHLFLCVLISDLATRYGPVIRPAKVINVLDAAFDVLIPEFGIEKRVHIDQM 1274
>gi|402225985|gb|EJU06045.1| RNB-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 921
Score = 333 bits (854), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 221/655 (33%), Positives = 335/655 (51%), Gaps = 80/655 (12%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDR 165
G VV+++ER P + G +G L + + G ++ A++ RS P
Sbjct: 184 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDKEPAEEKRSGTDRP-- 241
Query: 166 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 225
+ + PT + P + + + P +E +A VA I S P +
Sbjct: 242 KIVWFKPTDKRVPLIAIPTEQAPPDF---VENSEAYANRLFVAC-IKRHPISSLHPFGTL 297
Query: 226 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 285
+ G G++E + +A+L + FS L CLP +PW +P E +R+DLR IF
Sbjct: 298 VEELGPIGDLEVETSALLKDCNFPTEDFSDNVLKCLPPLPWTIPDREYETRRDLRGDRIF 357
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
TIDPSTA DLDDA+S+ + DG V VHIADVSYFV P TALD +A+ R+TSVY++QR
Sbjct: 358 TIDPSTAKDLDDAMSVRKNEDGTYDVSVHIADVSYFVKPSTALDRDAKKRATSVYLIQRA 417
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 405
+PMLP LSEE+ SL PGVDRLAF+ ++++ G V+ W GRT+IRS KL+Y +AQ++
Sbjct: 418 VPMLPPALSEELCSLVPGVDRLAFTAIFNMSPQGKVIGSWFGRTIIRSAAKLAYSNAQNV 477
Query: 406 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
IDG + LG+ ++ + S++ IK L++++ L++ R+ G LR+ + K
Sbjct: 478 IDG-------HPLGDV--EVSPEHTASEIEEDIKILHDLATKLREARWEAGGLRIHSQKL 528
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
F D+ P D R + N L EEFMLL N + A++IA A P+ A+LRRH P R+
Sbjct: 529 HFELDDNNMPLDCEAYDRTEANSLIEEFMLLTNLSVAKMIAAALPEQAMLRRHEEPVPRR 588
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
L F ++ G+ +D SS+G +S +D +L L AT+ M A YFCS
Sbjct: 589 LERFAEQAARLGVAMDVSSAGALQKSFNAI-----EDPLLRRQLEILATKAMHRAKYFCS 643
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNH 645
G D + HY L P+YTHFTSP+RRY D++VHR L+ L+ +
Sbjct: 644 G-MLDIAKYQHYGLNAPLYTHFTSPIRRYADVLVHRQLDCVLQ----------------N 686
Query: 646 REGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDR----KLA 701
+ V RF D+DA + VA CN + KLA
Sbjct: 687 PQDVETRF----NMDRDA------------------------VAKVAQQCNIKRDSAKLA 718
Query: 702 CRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+ L + L ++ ++ +ARV+ + +++ IE+R++ D++
Sbjct: 719 QEQSAHLYLCLLLSDLSQRYGPVIRQARVIGILDAAFDVFVPDFGIEKRVHVDQM 773
>gi|299469802|emb|CBN76656.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 814
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 227/699 (32%), Positives = 339/699 (48%), Gaps = 105/699 (15%)
Query: 105 SAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD 164
+ ++++ +P G+VV I+E + R D + + W + K + K+
Sbjct: 148 AGVLAAQGNLQPRGKVVFIMESAHREDHMGSLV----WSSPLKADGKLSDKD-------- 195
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
Y+ PT + P M+V +LP +I M V W+ S P H
Sbjct: 196 -SYVMFHPTDRRVPHMLVARGELPSIFVDNPGAYANSIFMACVKG---TWSATSKLPWGH 251
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VP------------------ 265
+ G G + + A+L +N + F L L +P
Sbjct: 252 NVRFVGEAGAIHAETKALLCQNGVNHGDFPRTVLRGLEAFLPPKNAEDGIDAGADIRGSR 311
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
W++P+EE+ R+DLR IFTIDP+ A DLDDALSI L+DG +GVHIADV+YFV P
Sbjct: 312 WKIPEEEISKRRDLRATRIFTIDPTGARDLDDALSITPLADGTFEIGVHIADVTYFVRPN 371
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR- 384
+ LD EA+ R+T+VY++Q+ IPMLP LL EE+ SLNP VDRL +S W +N G +VD+
Sbjct: 372 SDLDREARRRATTVYLVQQAIPMLPPLLCEELCSLNPQVDRLTYSCIWRMNVDGTLVDKP 431
Query: 385 -WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY------GQFEWSDVVRS 437
W GRTVIRSCCKL Y+ AQ +I+G +S+++ P+L+ +F +V +
Sbjct: 432 AWFGRTVIRSCCKLDYQTAQYMIEGTILPDSASSTS---PELWDRNRRPTEFTCGEVCQD 488
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 497
+ + ++K + KRF GAL L K F D+ G P D D N L EE+MLLA
Sbjct: 489 VLLMNSLAKRRRAKRFESGALSLNTPKLTFKLDDNGNPADFGSYPIRDSNRLVEEYMLLA 548
Query: 498 NKTAAEVIARAFPDSALLRRHP---APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 554
N A+ + D A LR HP +P + L+E A C G+++D +SSG SL +
Sbjct: 549 NFLVAQQMVEGADDRAFLRMHPPPISPGLNALKETLAGC---GIEIDITSSGSIQASLLR 605
Query: 555 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 614
R + D+ + + AT PMQ A Y +G W HYAL PVYTHFTSP+RRY
Sbjct: 606 LRTQCNDEEIA-QVCTMMATIPMQNAEYVAAGAAD---SWRHYALNIPVYTHFTSPIRRY 661
Query: 615 PDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALS 674
D++VHR L A L+ Y+ DA E
Sbjct: 662 ADVMVHRILTATLDGT------------------------VESSYEVDAIE--------- 688
Query: 675 VAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALG 734
A HCN ++LA + ++ ++Y+ + + L EA V+++G
Sbjct: 689 ---------------KTAQHCNYKRLAAKAAQERSDEVYLAVHVASNP-LEEEAVVISVG 732
Query: 735 PRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVLS 773
+ T+ I +L + R++ D++ + + E T+ L+
Sbjct: 733 EQSFTVNIPRLGVTSRLFLDKIPDIAATYDELEGTIHLT 771
>gi|384496606|gb|EIE87097.1| hypothetical protein RO3G_11808 [Rhizopus delemar RA 99-880]
Length = 885
Score = 332 bits (850), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 198/521 (38%), Positives = 280/521 (53%), Gaps = 30/521 (5%)
Query: 118 GRVVSIIERSPRRDGIVG--FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
G VV+IIER P+ G L ++ N D ++ +P R + PT
Sbjct: 214 GEVVAIIER-PKHTTYSGTIILPKSKESNETPPVEVDGDNDKQK-ELPRR--VWFKPTDK 269
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ P + + + +P I E + + L +A + W P ++ G G +
Sbjct: 270 RMPLIALFGRKVPSDIV----ENEEYYKTHLFSAEVYRWLITDSNPAGRIIKELGPVGYL 325
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
+ A++ +N+I + FSP +L LP +PW +P E +R DLR +F+IDP TA DL
Sbjct: 326 SAEKEAVIADNSIIDAEFSPVALQGLPELPWSIPAVEYRNRLDLRCERVFSIDPITAKDL 385
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDAL I L DG VGVHIADV+YF+ + LD EA R TS Y+ R IPMLP +L E
Sbjct: 386 DDALHIRPLRDGYLEVGVHIADVTYFLKKESPLDTEAMNRGTSTYLADRVIPMLPSVLCE 445
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
++ SLNPGVDRLAFS+ W ++ G + W GRT+I+SC KL+YEHAQ++I+G+
Sbjct: 446 QLCSLNPGVDRLAFSVLWIMDKFGKITKTWFGRTIIKSCAKLAYEHAQEVIEGR------ 499
Query: 416 NTLGEGWPQ---LYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
P+ +YG D++ I+ LY++S ++ +R G+L L + K F D
Sbjct: 500 -----NLPEDIIIYGNHNAEDILEDIRMLYDMSVHMRQRRKDGGSLSLHSVKLTFELDSN 554
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
G P + ++ N L EEFML AN + A+ I AFP ALLRRH P R+L F
Sbjct: 555 GDPISFDKAESKEANRLIEEFMLCANISVAQKIKEAFPSEALLRRHENPIERRLDAFLRL 614
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDT 592
GL D S++G +S D+ + +L+ R MQ A YFC+G F +
Sbjct: 615 TDVLGLNFDGSTAGTLQKSFNSV-----DNPNVKSVLLILCIRAMQRAKYFCAGAFNAEK 669
Query: 593 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
HYAL PVYTHFTSP+RRY D++VHR L AAL+ + Y
Sbjct: 670 HL-HYALNEPVYTHFTSPIRRYADVMVHRMLQAALDNKPTY 709
>gi|342320254|gb|EGU12196.1| SSD1 protein [Rhodotorula glutinis ATCC 204091]
Length = 1450
Score = 331 bits (849), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 222/660 (33%), Positives = 328/660 (49%), Gaps = 80/660 (12%)
Query: 118 GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKK-------------NRSSLSV 162
G VV+++ER+P + G++G L + + ++DA++ + S
Sbjct: 707 GHVVAVLERAPGQLFSGMLGVLRPSSAATQQ---KQDAERREREGVDLRGGHGQSNGSSQ 763
Query: 163 PDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQ 222
P + I PT + P + + + P + E+ L A I W S P
Sbjct: 764 PPPKIIWFRPTDKRVPLIAIPTEQAPADFVEHSEK----YSDRLFVACIKRWPITSLHPF 819
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLR 280
++ G G++E + NA+L + FS CLP PW +P EL R+DLR
Sbjct: 820 GQLVEELGPIGDIETETNALLKDCNFTAEDFSDSVNKCLPPTPWSIPDRELQPDVRRDLR 879
Query: 281 NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVY 340
+ +FTIDP TA DLDDAL I + DG VGVHIADVS+FV P T LD EA+ R+T+VY
Sbjct: 880 DKRVFTIDPETAKDLDDALHIIQNEDGTFEVGVHIADVSHFVKPNTPLDREARKRATTVY 939
Query: 341 MLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYE 400
++QR +PMLP LSEE+ SLN G D+L FS+ + L G +V W G+TVI S KL+Y
Sbjct: 940 LVQRAVPMLPPTLSEELCSLNAGSDKLTFSVIFTLTPEGQIVSTWFGKTVINSKVKLAYS 999
Query: 401 HAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 460
AQ +ID + TL EG ++ V +K L ++K L+ +RF GALR+
Sbjct: 1000 DAQHVID-------NGTLPEG--KIADAELREGVETDVKRLAGIAKHLRHRRFDSGALRI 1050
Query: 461 ENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
+N K F DE+G P D+ R++ N L EEFML+AN A IA PD +LLRRH
Sbjct: 1051 DNVKVSFRLDEFGLPVDAHEYARKEANELIEEFMLMANIAVAGKIASGLPDQSLLRRHEE 1110
Query: 521 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLA 580
P R+L F + GL +D SSS S+ K+ D L + +TR MQ A
Sbjct: 1111 PIDRRLDAFVQRMRRLGLDIDGSSSHALMDSI----VKITDPGERL-TLQHLSTRSMQRA 1165
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRML 640
YFC+G D + + HYAL P+YTHFTSP+RRY D++VHR L A L
Sbjct: 1166 KYFCTG-MLDISKYRHYALNVPLYTHFTSPIRRYADVIVHRQLEAVL------------- 1211
Query: 641 PKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKL 700
+ +A SL+ A+ + +A CN +K
Sbjct: 1212 --------IAQAAAASAETPTEAKFSLD----------------AEAVSKIAQTCNVKKE 1247
Query: 701 ACRNVKDACVKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
A R ++ L++ +L+ K+ ++ V+ + + + + + +E+R++ D++
Sbjct: 1248 AARLAQEQSQHLFLCVLIDDLTKRYGPVIRYGTVIGVLDQAFDVLVSEFGVEKRVHVDQM 1307
>gi|401889296|gb|EJT53231.1| SSD1 protein [Trichosporon asahii var. asahii CBS 2479]
Length = 1593
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 215/657 (32%), Positives = 334/657 (50%), Gaps = 79/657 (12%)
Query: 115 RPT--GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGS----RKDAKKNRSSLSVPDR- 165
+PT G VV+++ER P + G +G L + + ++ K R++ + P+
Sbjct: 867 KPTYAGHVVAVVERMPGQLFSGQLGVLRPSSAATKEKQEAERREREGDKARAAPAEPEPR 926
Query: 166 -EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
+ + PT + P + + + P +E +A +L A I W S P
Sbjct: 927 PKIVWFKPTDKRVPLIAIPTEQAPADF---IENPEAHAN-KLFVATIKRWPITSLHPFGT 982
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCI 284
++ G G+ E + +AIL + F+ +L CLP PW +P+ EL R+DLR+ C
Sbjct: 983 LIEELGPIGDCEVESSAILKDCNFPTEEFADVALKCLPPQPWTIPERELEIREDLRDECS 1042
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
FTIDPS A DLDDALSI+ DG VGVHIADVSYFV TALD +A+ R+TSVY++QR
Sbjct: 1043 FTIDPSGARDLDDALSIKTNDDGTYSVGVHIADVSYFVKVNTALDRDARKRATSVYLVQR 1102
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+PMLP LL EE+ SL PG DRLAFS + ++ G+V+D+ RTVI+S KL+YE A
Sbjct: 1103 AVPMLPPLLGEELCSLLPGQDRLAFSATFVIDKEGNVLDKQFRRTVIKSSVKLTYEDANK 1162
Query: 405 II-DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
II DG D E +++G + ++ ++ +L+E++ L+ KR GA+ +
Sbjct: 1163 IIKDGAIDAE----------KIHGHHKPEEIKANVLALHELAAKLRSKRIEGGAMLVNRP 1212
Query: 464 KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
+ F D G P D +S + + N L EEFMLL N + A +IA P+ ALLRRH P
Sbjct: 1213 RLSFELDAEGNPIDCNVSSKTEANTLVEEFMLLTNASVAAIIANGLPEQALLRRHEPPLE 1272
Query: 524 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 583
R++ F G +D +++G QS +K+ D ++ L Y + MQ A Y+
Sbjct: 1273 RRIEAFVKRAKLLGYDIDATNAGTIQQSF----DKIDDKEAVY-CLEMYKRKTMQTARYY 1327
Query: 584 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKN 643
C+G D + H+AL P+Y HFTSP+RRY D++VHR L++ L +
Sbjct: 1328 CTG-MLDIAKYAHWALNLPLYGHFTSPIRRYADVLVHRMLDSCLSSPS------------ 1374
Query: 644 NHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACR 703
T + + D D + A HCN ++ + +
Sbjct: 1375 ----------PTDVKFHMD----------------------RDQIAKCAQHCNMKRASGK 1402
Query: 704 NVKDACVKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+D LY+ +L+ + +L ARV A+ + + + + +E+R++ D++
Sbjct: 1403 LAEDQSRHLYLSMLISDLSSRYGPVLRHARVTAVYDQAFDVVVPEFGLEKRVHLDKL 1459
>gi|194379950|dbj|BAG58327.1| unnamed protein product [Homo sapiens]
Length = 675
Score = 329 bits (844), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 199/502 (39%), Positives = 273/502 (54%), Gaps = 40/502 (7%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDAPVTKDETTCISQDTRALSEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVH
Sbjct: 350 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+IRSC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 470 LTPEGKILDEWFGRTIIRSCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEV 525
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEF 493
+++ +L+ ++K L+ +RF DGALRL+ K F D E G P + + N L EEF
Sbjct: 526 HQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRESNKLVEEF 585
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
MLLAN A I RAFP+ ALLRRHP P R L + FC + GL +D SS+G ++SL
Sbjct: 586 MLLANMAVAHRIHRAFPEQALLRRHPPPQTRMLSDLVEFCDQMGLPVDFSSAGALNKSLT 645
Query: 554 QAREKLKDDYVLFDILINYATR 575
Q K ++L N +R
Sbjct: 646 QTFGDDKYSLARKEVLTNMCSR 667
>gi|406698992|gb|EKD02213.1| SSD1 protein [Trichosporon asahii var. asahii CBS 8904]
Length = 1780
Score = 329 bits (843), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 215/657 (32%), Positives = 334/657 (50%), Gaps = 79/657 (12%)
Query: 115 RPT--GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGS----RKDAKKNRSSLSVPDR- 165
+PT G VV+++ER P + G +G L + + ++ K R++ + P+
Sbjct: 1054 KPTYAGHVVAVVERMPGQLFSGQLGVLRPSSAATKEKQEAERREREGDKARAAPAEPEPR 1113
Query: 166 -EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
+ + PT + P + + + P +E +A +L A I W S P
Sbjct: 1114 PKIVWFKPTDKRVPLIAIPTEQAPADF---IENPEAHAN-KLFVATIKRWPITSLHPFGT 1169
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCI 284
++ G G+ E + +AIL + F+ +L CLP PW +P+ EL R+DLR+ C
Sbjct: 1170 LIEELGPIGDCEVESSAILKDCNFPTEEFADVALKCLPPQPWTIPERELEIREDLRDECS 1229
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
FTIDPS A DLDDALSI+ DG VGVHIADVSYFV TALD +A+ R+TSVY++QR
Sbjct: 1230 FTIDPSGARDLDDALSIKTNDDGTYSVGVHIADVSYFVKVNTALDRDARKRATSVYLVQR 1289
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+PMLP LL EE+ SL PG DRLAFS + ++ G+V+D+ RTVI+S KL+YE A
Sbjct: 1290 AVPMLPPLLGEELCSLLPGQDRLAFSATFVIDKEGNVLDKQFRRTVIKSSVKLTYEDANK 1349
Query: 405 II-DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
II DG D E +++G + ++ ++ +L+E++ L+ KR GA+ +
Sbjct: 1350 IIKDGAIDAE----------KIHGHHKPEEIKANVLALHELAAKLRSKRIEGGAMLVNRP 1399
Query: 464 KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
+ F D G P D +S + + N L EEFMLL N + A +IA P+ ALLRRH P
Sbjct: 1400 RLSFELDAEGNPIDCNVSSKTEANTLVEEFMLLTNASVAAIIANGLPEQALLRRHEPPLE 1459
Query: 524 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 583
R++ F G +D +++G QS +K+ D ++ L Y + MQ A Y+
Sbjct: 1460 RRIEAFVKRAKLLGYDIDATNAGTIQQSF----DKIDDKEAVY-CLEMYKRKTMQTARYY 1514
Query: 584 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKN 643
C+G D + H+AL P+Y HFTSP+RRY D++VHR L++ L +
Sbjct: 1515 CTG-MLDIAKYAHWALNLPLYGHFTSPIRRYADVLVHRMLDSCLSSPS------------ 1561
Query: 644 NHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACR 703
T + + D D + A HCN ++ + +
Sbjct: 1562 ----------PTDVKFHMD----------------------RDQIAKCAQHCNMKRASGK 1589
Query: 704 NVKDACVKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+D LY+ +L+ + +L ARV A+ + + + + +E+R++ D++
Sbjct: 1590 LAEDQSRHLYLSMLISDLSSRYGPVLRHARVTAVYDQAFDVVVPEFGLEKRVHLDKL 1646
>gi|390600976|gb|EIN10370.1| RNB-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 1141
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 207/651 (31%), Positives = 339/651 (52%), Gaps = 76/651 (11%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR-----EYIQ 169
G VV+++ER P + G +G L + + + ++ P R + +
Sbjct: 405 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGDEPRRPIERPKIVW 464
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
PT + P + + + P + E +L A I S P ++
Sbjct: 465 FKPTDKRVPLIAIPTEQAPADFVQNSE----AYADKLFVACIKRHPISSLHPFGTLVEEL 520
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 289
G G++E + +A+L + F+ L CLP PW +P+ EL +R+DLR+ +FTIDP
Sbjct: 521 GPIGDIEVETSALLKDCNFPTEEFTENVLKCLPPTPWTIPEHELKNRRDLRDQRVFTIDP 580
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
TA DLDDALS++ DG +VGVHIADVSYFV P TALD +A+ R+TSVY++QR +PML
Sbjct: 581 DTAKDLDDALSLKANDDGTFQVGVHIADVSYFVKPNTALDRDARKRATSVYLVQRAVPML 640
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P LSEE+ SL PG +RLAFS+ + + G VVD+W G+T I+S KL+Y Q+++DGK
Sbjct: 641 PPALSEEMCSLKPGQERLAFSVLFTVTKDGRVVDKWFGKTAIKSAAKLAYADVQNVLDGK 700
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
LG G P + + SD+ +K L +++K+LK++R +G++ L++ + F
Sbjct: 701 -------PLG-GVP-VTPEHGASDLEHDLKILQDLAKLLKERRTQNGSMSLQSIRLKFTL 751
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ G P D R D + L EE+ML+ N A+ +A P+ ALLRRH +P R+L+ F
Sbjct: 752 DKNGLPIDCAPYERYDAHSLVEEYMLMTNIAVAQHVAVHLPEQALLRRHDSPLERRLKAF 811
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
+ + G+++D S++G +S + +KD + + + + Q A YFC+G
Sbjct: 812 QERAKEGGVEIDISTAGSIMRSF----DAIKDPVARRTLEMRF-FKCTQRAKYFCTG-ML 865
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
D +GHYAL P+YTHFTSP+RRY D++VHR L + L++ G
Sbjct: 866 DIAKYGHYALNVPLYTHFTSPIRRYADILVHRQLESILQS------------------GN 907
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F D+DA + +A CN ++ + + ++
Sbjct: 908 DPKFA----MDRDA------------------------VAKIAQQCNIKRDSAKLAQEQS 939
Query: 710 VKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
LY+ +L+ ++ ++ +A+V+ + + + + IE+R++ D++
Sbjct: 940 AHLYLCVLVSDLTQRYGPVVRQAKVVGVLDAAFDVLVPEFGIEKRVHIDQM 990
>gi|313233114|emb|CBY24226.1| unnamed protein product [Oikopleura dioica]
Length = 828
Score = 328 bits (841), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 204/594 (34%), Positives = 305/594 (51%), Gaps = 63/594 (10%)
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELV-AARIDEWNEESPFPQAHVLHV 228
P + P+M++ L + + K+++E I +++ A+I EW E + +A + +
Sbjct: 211 FVPCDNRLPRMLIAKSSLAEDMAKKIKE---IISRKIIFEAKIIEWEEGAQNARAVLTNE 267
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSC-LPCVPWEVPQEELLSRKDLRNFCIFTI 287
G +++ Q++AIL + +I + + LP W + E++ R+D RN C+FTI
Sbjct: 268 IGDPEDLQVQMDAILVDKSIDTRDWETFDVDDELPGKEWTITDEQVAKRRDFRNECVFTI 327
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP+TA DLDDAL ++RL D + VGVHIADV++FV PG +D A R TS YM R +P
Sbjct: 328 DPATARDLDDALHVKRLDDNVYEVGVHIADVAFFVKPGGKIDKVASERCTSTYMPDRVVP 387
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDII 406
MLP L EE+ SLNP V+R +FS+ + L++ G+ ++ W GR +I+SC K SYE+AQ I
Sbjct: 388 MLPRRLCEELCSLNPLVERYSFSVVFKLDAEGNYLEEPWYGRGLIKSCVKFSYENAQHFI 447
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
+ E N +P++ + + + L +SK L++KR +G +R+E K
Sbjct: 448 ENP---EEENIDESDFPEVLNGYSLETIRHCVLMLDMLSKKLREKRVANGCIRIEQPKIG 504
Query: 467 FLFDE-YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
F +DE TP R+D + + E+FMLLAN AE I R FPD A LR+HP PN K
Sbjct: 505 FTWDEATKTPNGFFPYIRKDAHMMIEDFMLLANIAVAEKIERHFPDRAFLRQHPPPNQEK 564
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
+ E KHG+ +D +SS +SLE+ + ++ V L + MQLA Y C+
Sbjct: 565 ITEVVEELRKHGINIDHTSSRDLARSLEKVTQ--ENAQVFQSALSLLTVKTMQLAKYICT 622
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNH 645
D +D D+ HYALA P+YTHFTSP+RRY DLVVHR L AA+ W P
Sbjct: 623 NDVEDRYDYRHYALAVPLYTHFTSPIRRYADLVVHRQLAAAIG-----WDESFETP---- 673
Query: 646 REGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNV 705
A+ L A CN+RKL +
Sbjct: 674 ---------------------------------------AETLTEQAESCNERKLQAKLA 694
Query: 706 KDACVKLYMWILLK---KKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+ +Y+W ++K K + + V L + I + + RIYY E+
Sbjct: 695 GEDGSDVYLWCMIKRITKDSEFIMDGVVTGLVEYGLEILLHETGFTLRIYYGEM 748
>gi|313223557|emb|CBY41956.1| unnamed protein product [Oikopleura dioica]
Length = 724
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 205/595 (34%), Positives = 307/595 (51%), Gaps = 67/595 (11%)
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELV-AARIDEWNEESPFPQAHVLHV 228
P + P+M++ L + + K+++E I +++ A+I EW E + +A + +
Sbjct: 109 FVPCDNRLPRMLIAKSALAEDMAKKIKE---IISRKIIFEAKIIEWEEGAQNARAVLTNE 165
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSC-LPCVPWEVPQEELLSRKDLRNFCIFTI 287
G +++ Q++AIL + +I + + LP W + E++ R+D RN C+FTI
Sbjct: 166 IGDPEDLQVQMDAILIDKSIDTRDWETFDVDDELPGKEWTITDEQVAKRRDFRNECVFTI 225
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP+TA DLDDAL ++RL D + VGVHIADV++FV PG +D A R TS YM R +P
Sbjct: 226 DPATARDLDDALHVKRLDDNVYEVGVHIADVAFFVKPGGKIDKVASERCTSTYMPDRVVP 285
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDII 406
MLP L EE+ SLNP V+R +FS+ + L++ G+ ++ W GR +I+SC K SYE+AQ I
Sbjct: 286 MLPRRLCEELCSLNPLVERYSFSVVFKLDAEGNYLEEPWYGRGLIKSCVKFSYENAQHFI 345
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
+ E N +P++ + + + L +SK L++KR +G +R+E K
Sbjct: 346 ENP---EEENIDESDFPEVLNGYSLETIRHCVLMLDMLSKKLREKRVANGCIRIEQPKIG 402
Query: 467 FLFDE-YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
F +DE TP R+D + + E+FMLLAN AE I R FPD A LR+HP PN K
Sbjct: 403 FSWDEATKTPNGFFPYIRKDAHMMIEDFMLLANIAVAEKIERHFPDRAFLRQHPPPNQEK 462
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYAT-RPMQLASYFC 584
+ E KHG+ +D +SS +SLE+ ++ V F ++ T + MQLA Y C
Sbjct: 463 ITEVVEELRKHGINIDHTSSRDLARSLEKVTQE-----VFFQSALSLLTVKTMQLAKYIC 517
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNN 644
+ D +D D+ HYALA P+YTHFTSP+RRY DLVVHR L AA+ W P
Sbjct: 518 TNDVEDRYDYRHYALAVPLYTHFTSPIRRYADLVVHRQLAAAIG-----WDESFETP--- 569
Query: 645 HREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRN 704
A+ L A CN+RKL +
Sbjct: 570 ----------------------------------------AETLTEQAESCNERKLQAKL 589
Query: 705 VKDACVKLYMWILLK---KKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+ +Y+W ++K K + + V L + I + + RIYY E+
Sbjct: 590 AGEDGSDVYLWCMIKRITKDSEFIMDGVVTGLVEYGLEILLHETGFTLRIYYGEM 644
>gi|302696509|ref|XP_003037933.1| hypothetical protein SCHCODRAFT_71865 [Schizophyllum commune H4-8]
gi|300111630|gb|EFJ03031.1| hypothetical protein SCHCODRAFT_71865 [Schizophyllum commune H4-8]
Length = 922
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 213/651 (32%), Positives = 336/651 (51%), Gaps = 76/651 (11%)
Query: 118 GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ------ 169
G VV+++ER P + G +G L + + + ++ + P + I+
Sbjct: 185 GHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGITGEEPKKGPIERPKIVW 244
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
PT + P + + + P ++ +A ++ +L A I S P ++
Sbjct: 245 FKPTDKRVPLIAIPTEQAPPDF---VQNSEAYVD-KLFVACIKRHPISSLHPFGTLVEEL 300
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 289
G G++E + +A+L + F+ + CLP +PW +P+ EL RKDLR IF+IDP
Sbjct: 301 GPIGDIEVETSALLKDCNFPTEDFADNVMKCLPPMPWTIPERELDLRKDLRGERIFSIDP 360
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
TA DLDDALSI+ DG +GVHIADVSYFV P TALD +A+ R+TSVY++QR +PML
Sbjct: 361 DTAKDLDDALSIKANEDGTYEIGVHIADVSYFVKPNTALDRDARKRATSVYLVQRAVPML 420
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P LSEE+ SL PG DRLAFS+ + + V ++W G+T+IRS +LSY +AQD+I+G+
Sbjct: 421 PPTLSEELCSLVPGQDRLAFSVVFTMTKDAKVTNKWFGKTIIRSAAQLSYANAQDVIEGR 480
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
LG+ + + D+ I+ L++++K L+ +RF +GAL L++ F
Sbjct: 481 -------VLGDV--PVIPEHNAVDIEHDIRVLHDIAKELRKQRFENGALSLDSLSLSFKL 531
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE G P D R + N L EEFMLL N T A+ IA P+ ALLRRH P R+L F
Sbjct: 532 DETGKPIDCGQRTRVEANDLIEEFMLLTNITVAQHIAVHLPEQALLRRHDTPIDRRLNNF 591
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
+ G+Q+DT+SSG +S + ++ + L ++L AT Q A Y+C+G
Sbjct: 592 VDRAKRLGVQMDTTSSGAMMRSFDAIKDPMTRK--LLELLSFKAT---QRAKYYCAG-ML 645
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
D + HYAL P+YTHFTSP+RRY D++VHR L + L++ K
Sbjct: 646 DIAKYHHYALNVPLYTHFTSPIRRYADVLVHRQLESTLQSTPGEAK-------------- 691
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
D+DA + VA CN ++ + ++
Sbjct: 692 -------FMMDRDA------------------------VAKVAQQCNIKRDSAVLAQEQS 720
Query: 710 VKLYMWILLK----KKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
L++ +L+ + ++ +A+V+ + + + + IE+R++ D++
Sbjct: 721 AHLFLCVLISDLTHRYGPVIRQAKVINVLDAAFDVLVPEFGIEKRVHVDQM 771
>gi|449549781|gb|EMD40746.1| CsMn04 [Ceriporiopsis subvermispora B]
Length = 1467
Score = 326 bits (835), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 209/650 (32%), Positives = 327/650 (50%), Gaps = 77/650 (11%)
Query: 118 GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQL 170
G VV+++ER P + G +G L + + + ++ P R+ +
Sbjct: 733 GHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGDEPRRQIERPKIVWF 792
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
PT + P + + + P + E +L A I S P ++ G
Sbjct: 793 KPTDKRVPLIAIPTEQAPPDFVQNSE----AYANKLFVACIKRHPISSLHPFGTLVEELG 848
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPS 290
G++E + +A+L + F+ + CLP +PW +P+ E RKDLR IFTIDP
Sbjct: 849 PIGDIEVETSALLKDCNFPTEEFTENVMKCLPPIPWTIPEREFELRKDLRGERIFTIDPD 908
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
TA DLDDALS++ DG VGVH+ADVSYFV P TALD +A+ R+TSVY++QR +PMLP
Sbjct: 909 TAKDLDDALSVKANEDGTYDVGVHVADVSYFVKPNTALDRDARKRATSVYLIQRAVPMLP 968
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 410
LSE++ SL PG DRLAF++ + + G V+ +W G++VIRS KLSYE+AQ ++ GK
Sbjct: 969 PALSEQLCSLVPGEDRLAFTVIFTMTKEGKVLKKWFGKSVIRSTAKLSYENAQAVLQGK- 1027
Query: 411 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 470
E + G+ +D+ IK L ++++L+ +RF +G ++ E+ K F D
Sbjct: 1028 ---------ELINKPVGEHNEADIANDIKILDSLAQLLRSRRFQNGCVKTESLKLSFKLD 1078
Query: 471 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFE 530
+ G P D R + + L EEFMLL N A+ IA F + ALLRRH AP R+L F
Sbjct: 1079 DNGMPVDCWPHDRIEAHHLVEEFMLLTNIAVAQQIAVHFSEQALLRRHDAPIERRLVAFV 1138
Query: 531 AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKD 590
+ G ++D SS SL+ ++ + ++L+ A+ A YFC+G D
Sbjct: 1139 QRAERLGYKMDISSVATLMSSLQAVQDPTA--RRILEMLLQKAS---PRAKYFCAG-MLD 1192
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVR 650
+ HYAL P+YTHFTSP+RRY D++VHR L++ L+ G
Sbjct: 1193 IAKYTHYALNVPLYTHFTSPIRRYADILVHRQLDSILQ------------------NGAE 1234
Query: 651 GRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACV 710
+F D+DA + VA CN ++ + + ++
Sbjct: 1235 PKFT----MDRDA------------------------VAKVAQQCNIKRDSAKLAEEQST 1266
Query: 711 KLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
L++ IL+ ++ ++ ARV+ + + I + IE+R++ D++
Sbjct: 1267 HLFLCILIADLTQRFGPVIRRARVVGVLDAAFDVLIPEFGIEKRVHVDQM 1316
>gi|297669705|ref|XP_002813047.1| PREDICTED: LOW QUALITY PROTEIN: DIS3 mitotic control homolog (S.
cerevisiae)-like 2 [Pongo abelii]
Length = 908
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 227/693 (32%), Positives = 334/693 (48%), Gaps = 105/693 (15%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 213 DGDAPVTKDETTCISQDTRALPEKSLQR-------------SAKVVYILEKKHSR-AATG 258
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 259 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 302
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 303 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 358
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG VGVH
Sbjct: 359 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVH 418
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 419 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 478
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+I SC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 479 LTPEGKILDEWFGRTIICSCTKLSYEHAQSMIENPTEKIPAKEL----PPISPEHSSEEV 534
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEF 493
+++ +L+ ++K L+ +RF DGALRL+ K F D E G P + D N ++
Sbjct: 535 HQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAFTLDHETGLPQGCHIYEYRDSNKXAKQK 594
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
L A V+ S + R A + + FC +T+ +FH+ +
Sbjct: 595 PLEPEGIA--VLDDRQRLSMAINRLVAASRIEEHVCCLFCGCFSDSRNTAGK-RFHRQYK 651
Query: 554 QAREKLKDDYVLFDIL--------------INYATRPMQLASYFCSGDFKDDTDWGHYAL 599
+ L + + + ++ RP+ +A YFCSG +D + HYAL
Sbjct: 652 NTGKLLLPSGLCYKVKLPIHNGEPTPARPGLHRGQRPVVMALYFCSGLLQDPAQFRHYAL 711
Query: 600 AFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFY 659
P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 712 NVPLYTHFTSPIRRFADVLVHRLLAAALGY------------------------------ 741
Query: 660 DKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLK 719
RE L +A D L A HCNDR++A + V++ L+ +L+K
Sbjct: 742 ----------RERLDMA--------PDTLQKQADHCNDRRMASKRVQELSTSLFFAVLVK 783
Query: 720 KKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
+ L SEA V+ + + + + + +++RIY
Sbjct: 784 ESGPLESEAMVMGVLNQAFDVLVLRYGVQKRIY 816
>gi|392592802|gb|EIW82128.1| RNB-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 924
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 213/650 (32%), Positives = 321/650 (49%), Gaps = 76/650 (11%)
Query: 118 GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR-----EYIQL 170
G VV+++ER P + G +G L + + + ++ P R + +
Sbjct: 186 GHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGDEPRRPIERPKIVWF 245
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
PT + P + + + P + E +L A I S P + G
Sbjct: 246 KPTDKRVPLIAIPTEQAPPDFVQNSE----AYANKLFVACIKRHPISSLHPFGTLAEELG 301
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPS 290
G++E + +A+L + FS + CLP PW +P+ E RKDLR IFTIDP
Sbjct: 302 PIGDIEVETSALLKDCNFPTEEFSESVMKCLPPTPWTIPEREFEVRKDLRQERIFTIDPE 361
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
+A DLDDA+S++ DG +GVHIADVS+FV P TALD +A+ R+TSVY++QR +PMLP
Sbjct: 362 SAKDLDDAVSVKLNDDGTYDIGVHIADVSFFVKPNTALDRDARKRATSVYLVQRAVPMLP 421
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 410
+LS EV SLN G DRLAFS + VV +W G+T+I+S KLSY+ AQ +IDG
Sbjct: 422 PILSGEVCSLNAGQDRLAFSAVFTTTKDAKVVKKWFGKTIIKSAAKLSYDDAQRVIDGHP 481
Query: 411 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 470
+ T + E S + IK LY+++K L+D R+ +GAL L + + F D
Sbjct: 482 LTDIVVT---------PEHEASAIEHDIKVLYDIAKQLRDTRYKNGALSLSSMRLQFKLD 532
Query: 471 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFE 530
G P D R + L EEFMLL N + A+ +A P+ ALLRRH P R++
Sbjct: 533 SEGKPVDCWQQERNEAQSLIEEFMLLTNISVAQRVAVHLPEQALLRRHDTPLERRMNALA 592
Query: 531 AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKD 590
+ G+++DTSS+G +SLE L ++L AT Q A YFC+G D
Sbjct: 593 DRARRLGIEIDTSSAGAMMRSLEGVNNPTARK--LLELLSFKAT---QRAKYFCAG-MLD 646
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVR 650
+ HYAL+ P+YTHFTSP+RRY D++VHR L + L+ G
Sbjct: 647 IAKYNHYALSIPLYTHFTSPIRRYADVLVHRQLESVLQG------------------GAE 688
Query: 651 GRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACV 710
+F D+DA + VA CN +K + + ++
Sbjct: 689 PKFT----MDRDA------------------------VAKVAQQCNIKKDSAKLAQEQSA 720
Query: 711 KLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
LY+ +L+ + ++ +A+V+ + + I + IE+R++ D++
Sbjct: 721 HLYLCVLVSDLTQSYGPVIRQAKVVGVLDAAFDVLIPEFGIEKRVHVDQM 770
>gi|326436127|gb|EGD81697.1| hypothetical protein PTSG_02410 [Salpingoeca sp. ATCC 50818]
Length = 1023
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 218/633 (34%), Positives = 311/633 (49%), Gaps = 88/633 (13%)
Query: 166 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 225
+Y++ P P+ P++++ P + + + AR+ W+E SP +
Sbjct: 424 KYVRFNPRDPRVPRLLIPKDKAPQDFYQNTK----AYAGKCYTARLVHWSEHSPLAIGEL 479
Query: 226 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP----WEVPQEELLSRKDLRN 281
+ V G G + + +IL EN + + F+ + L+CLP V W +PQEEL R+DLR+
Sbjct: 480 VDVLGNAGAITVETESILQENGVPPAEFTEDVLACLPDVKEGDDWRIPQEELARRRDLRH 539
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
IF++DP TA DLDDALS ++L DG VGVHIADVS+F+ G+ALD EA+ R+TS YM
Sbjct: 540 ERIFSVDPLTARDLDDALSCKKLDDGSFEVGVHIADVSFFIERGSALDKEAKRRATSTYM 599
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ PMLP LL E + SL VDRLA+S+ W L++ G+ +D+W+GRTVIRSC KL+YEH
Sbjct: 600 VHGVYPMLPRLLCENLCSLVADVDRLAYSVIWRLDADGNKLDQWMGRTVIRSCGKLAYEH 659
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ +I+ ES GE +P + V R I L ++K ++ +RF GAL L
Sbjct: 660 AQAVIED----ESVQWTGEDFPPISAPHTIDSVKRDIVHLDRLAKAMRRRRFAGGALSLN 715
Query: 462 NSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
K D + P + D N + E+FMLLAN + A+VI+ +P ALLRRHP
Sbjct: 716 KGKVGIRVDPDTQEPVEVYPYEIRDANRMIEDFMLLANMSVAQVISDTYPQCALLRRHPP 775
Query: 521 PNMRKLR---------EFEAFCSKHGLQLDTSSSGQ-FHQSLEQAREKLKDDYVLFDILI 570
P +L L T Q HQ Q + L
Sbjct: 776 PLQARLHTVRVVLCCVVLCCVTVLLASHLTTHLPNQPNHQPCTQP------SLLQVHALA 829
Query: 571 NYATRPMQLASYFCSGDFK-DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
R MQLA YF +G + +W HYAL PVYTHFTSP+RRY D++VHR L +AL
Sbjct: 830 AMLARAMQLAEYFSTGSEELTRQEWRHYALNAPVYTHFTSPIRRYADVIVHRLLTSALNG 889
Query: 630 EKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILV 689
D D YG P D
Sbjct: 890 ------------------------------DIDP---------------HYGHPQVD--- 901
Query: 690 NVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIER 749
++A CN RKLA + +++ V LY L ++++A V+ + + +++ K IE
Sbjct: 902 DIADTCNVRKLAAKRAQESSVSLYTSAYLAAHGPVVAQAVVIEVMSYSVKLHVPKYGIEH 961
Query: 750 R---------IYYDEVEG-LIVEWLETTSTLVL 772
+ + YDE G L V W +TT ++
Sbjct: 962 QANLKLLDLPLKYDERAGKLTVTWNDTTKQELM 994
>gi|392568788|gb|EIW61962.1| RNB-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 1258
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 208/651 (31%), Positives = 328/651 (50%), Gaps = 76/651 (11%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLN-----VNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ 169
G VV+++ER P + G +G L + + R+ K + + + +
Sbjct: 514 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDKGDEPRRPIERPKIVW 573
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
PT + P + + + P + E T +L A I S P ++
Sbjct: 574 FKPTDKRVPLIAIPTEQAPPDFVQNSE----TYANKLFVACIKRHPISSLHPFGTLVEEL 629
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 289
G G++E + +A+L + FS L CLP PW +P+ E RKDLR+ +FTIDP
Sbjct: 630 GPIGDIEVETSALLKDCNFPTEDFSDNVLKCLPPTPWTIPEREFDVRKDLRSERVFTIDP 689
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
A DLDDA+S++ DG +GVHIADVSYFV P TALD +A+ R+TSVY++QR +PML
Sbjct: 690 EDAKDLDDAVSVKVNEDGTYDIGVHIADVSYFVKPNTALDRDARKRATSVYLVQRAVPML 749
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P LSE+V SL PG +RLAFS+ + ++ VV +W G+T+I+S KLSY A +IDGK
Sbjct: 750 PPTLSEQVCSLLPGQERLAFSVIFTVSKDAKVVKKWFGKTIIKSAAKLSYNDAHGVIDGK 809
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
+LG+ + + + + + IK L +++K L+ +RF +G ++ + + F
Sbjct: 810 -------SLGDV--PIIPEHDAAGISHDIKVLDDIAKQLRARRFQNGCVKSNSLRLKFKL 860
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE G P D R + + L EEFMLL N A+ IA F + A+LRRH P+ R+L F
Sbjct: 861 DESGLPVDCGSYERTEAHNLIEEFMLLTNMAVAQQIAVHFSEQAMLRRHDTPSERRLGAF 920
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
+ G +D+SS G +S+E + D ++L + + A YFC+G
Sbjct: 921 AERAQRLGYTIDSSSVGTLMRSIEAVQ-----DPTARNVLELFLQKASPRAKYFCAG-ML 974
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
D +GHYAL P+Y+HFTSP+RRY D++VHR L+A L+ PK N
Sbjct: 975 DIAKYGHYALNIPLYSHFTSPIRRYADIIVHRQLDAILQGGP--------EPKFN----- 1021
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
D+DA + VA CN ++ + + ++
Sbjct: 1022 ---------MDRDA------------------------VAKVAQQCNIKRDSAKLAQEQS 1048
Query: 710 VKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
LY+ +L+ ++ ++ +A+V+ + + I + IE+R++ D++
Sbjct: 1049 AHLYLCVLISDLTQRYGPVIRQAKVIGVLDAAFDVLIPEFGIEKRVHVDQM 1099
>gi|336386389|gb|EGO27535.1| hypothetical protein SERLADRAFT_346957 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1075
Score = 322 bits (826), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 211/655 (32%), Positives = 325/655 (49%), Gaps = 83/655 (12%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDR 165
G VV+++ER P + G +G L + + G R D + R + P
Sbjct: 337 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGDEPR-RGPIERP-- 393
Query: 166 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 225
+ + PT + P + + + P ++ +A + +L A I S P +
Sbjct: 394 KIVWFKPTDKRVPLIAIPTEQAPPDF---VQNSEAYVN-KLFVACIKRHPISSLHPFGTL 449
Query: 226 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 285
+ G G++E + +A+L + F L CLP PW +P+ E RKD+R +F
Sbjct: 450 VEELGPIGDIEVETSALLKDCNFPTEDFGDNVLKCLPPTPWTIPEREYEVRKDMRQDLVF 509
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
T+DP +A DLDDA+S++ DG +G+HIADVSYFV P TALD +A+ R+TSVY++QR
Sbjct: 510 TVDPGSAKDLDDAMSVKANDDGTYDIGIHIADVSYFVKPNTALDRDARKRATSVYLVQRA 569
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 405
+PMLP LSEE SLNPG +RLAFS + + VV++W G+TVI+S K+SYE AQ +
Sbjct: 570 VPMLPPTLSEEACSLNPGQERLAFSAIFTMTKDAKVVNKWFGKTVIKSAAKISYEKAQKV 629
Query: 406 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
IDG + LG+ + + + + IK L ++K L+ +RF DGAL L +
Sbjct: 630 IDG-------HVLGDV--PVTPDHDAAAIEHDIKVLNSLAKQLRARRFQDGALSLSTMQL 680
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
F DE G P D D N L EEFML+ N + A+ +A P+ ALLRRH P R+
Sbjct: 681 QFKLDESGLPIDCWQHESSDANELVEEFMLMTNVSVAQRVAVHLPEQALLRRHDNPIDRR 740
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
L F + G ++DTSS G +S + L ++L + AT A YFC+
Sbjct: 741 LAAFSERAKRLGYEIDTSSPGAIMRSFQSVTNPTARR--LLELLSHKAT---HRAKYFCA 795
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNH 645
G D + HYAL P+YTHFTSP+RRY D++VHR L + L++
Sbjct: 796 G-MLDIAKYNHYALNVPLYTHFTSPIRRYADVLVHRQLESVLQS---------------- 838
Query: 646 REGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNV 705
G +F D+DA + VA CN ++ +
Sbjct: 839 --GAEPKFT----MDRDA------------------------VAKVAQQCNIKRDSATLA 868
Query: 706 KDACVKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
++ LY+ +L+ + ++ +A+V+ + + + + IE+R++ D++
Sbjct: 869 QEQSTHLYLCVLIADLTHRYGPVIRQAKVVGVLDAAFDVLVPEFGIEKRVHVDQM 923
>gi|334325039|ref|XP_001374171.2| PREDICTED: DIS3-like exonuclease 2-like [Monodelphis domestica]
Length = 740
Score = 322 bits (825), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 184/422 (43%), Positives = 243/422 (57%), Gaps = 22/422 (5%)
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
R+ +P+ + P++ V + D P + R + L RI W E S F H
Sbjct: 256 RKCALFSPSDHRVPRVYVPLADCPADLVSRPND----YAQALFVCRIVAWEEHSHFAVGH 311
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFC 283
+ G+ GE+EP+ IL E + S FSPE L CLP +PW +P E R+DLR C
Sbjct: 312 LAKSLGQAGEIEPETEGILMEYGVDFSDFSPEVLECLPQALPWTIPPAEFSKRRDLRKDC 371
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
+FTIDP+TA DLDDALS L DG VGVHIADVSYFV G+ALD A R+TSVY++Q
Sbjct: 372 VFTIDPATARDLDDALSCRPLPDGNFEVGVHIADVSYFVPEGSALDKVASERATSVYLVQ 431
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
+ +PMLP LL EE+ SLNP D+L FS+ W L+ G ++D W GRT+I SC KLSY+HAQ
Sbjct: 432 KVVPMLPRLLCEELCSLNPMTDKLTFSVVWKLSPEGKILDEWFGRTIICSCTKLSYDHAQ 491
Query: 404 DII---DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 460
+I D KF + P + + ++I +L+ ++ L+ +RF DGALRL
Sbjct: 492 SMIEHPDKKFHEDE-------LPPVSTDHPIEQIHQAILNLHGIATHLRRQRFVDGALRL 544
Query: 461 ENSKPVFLFDE-YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 519
+ K F D+ G P + +D N L EEFMLLAN A I RAFP+ ALLRRHP
Sbjct: 545 DQLKLAFTLDQDSGMPQGCHIYEYKDSNKLVEEFMLLANMAVAHQIYRAFPERALLRRHP 604
Query: 520 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD-YVLF--DILINYATRP 576
P + L + E C + GL +D SS+G H+SL E DD Y L ++L N +RP
Sbjct: 605 PPQSKLLSDLEELCDQLGLAIDFSSAGALHKSL---TEMFGDDMYSLAWKEVLTNMCSRP 661
Query: 577 MQ 578
MQ
Sbjct: 662 MQ 663
>gi|403414903|emb|CCM01603.1| predicted protein [Fibroporia radiculosa]
Length = 1469
Score = 322 bits (825), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 208/654 (31%), Positives = 327/654 (50%), Gaps = 83/654 (12%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR-----EYIQ 169
G VV+++ER P + G +G L + + + ++ P R + +
Sbjct: 734 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGDEPRRPIERPKIVW 793
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
PT + P + + + P ++ DA +L A I S P ++
Sbjct: 794 FKPTDKRVPLIAIPTEQAPQDF---VQNSDAYAN-KLFVACIKRHPISSLHPFGTLVEEL 849
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 289
G G++E + +A+L + F+ L CLP +PW +P EL RKDLRN FTIDP
Sbjct: 850 GPIGDIEVETSALLKDCNFPTEDFTENVLKCLPPIPWSIPDHELQVRKDLRNERAFTIDP 909
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
TA DLDDALS++ DG V VH+ADVSYFV P TALD +A+ R+TSVY++QR +PML
Sbjct: 910 DTAKDLDDALSVKVNDDGTYDVAVHVADVSYFVKPNTALDRDARKRATSVYLVQRAVPML 969
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG- 408
P LSE++ SL PG +RLAFS+ + + G V+ +W G+T+I++ KLSY AQ IIDG
Sbjct: 970 PPALSEQMCSLVPGEERLAFSVIFTMTKDGKVLKKWFGKTLIKTSAKLSYTDAQSIIDGH 1029
Query: 409 --KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
+F+V + + +DV + ++ ++E++K ++ +RF G ++ ++ K
Sbjct: 1030 AVEFEVAPEHAV-------------ADVSKDVRVIHELAKQVRARRFQIGCIKSQSLKLT 1076
Query: 467 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
F D+ G P D R + + L EEFMLL N A+ IA F + ALLRRH P R+L
Sbjct: 1077 FKLDDDGVPIDCSQYERTEAHHLVEEFMLLTNVAVAQQIAVNFSEQALLRRHDPPIERRL 1136
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 586
F + G ++D SS +SL+ +D IL + + A YFC+G
Sbjct: 1137 AAFVERAERMGFKVDASSPITLMKSLDAV-----NDPSARKILELFLRKASSAAKYFCAG 1191
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 646
D +GH+AL P+YTHFTSP+RRY D++VHR L++ L+
Sbjct: 1192 -MLDIAKYGHFALNIPLYTHFTSPIRRYADILVHRQLDSILQG----------------- 1233
Query: 647 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 706
G +F D+DA + VA CN ++ + + +
Sbjct: 1234 -GAEPKFT----MDRDA------------------------VAKVAQQCNIKRDSAKLAE 1264
Query: 707 DACVKLYMWILLK----KKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+ LY+ IL+ + ++ EA+V+ + + + + IE+R++ D++
Sbjct: 1265 EQSTHLYLCILISDLTHRYGPVIREAKVVGVLDAAFDVLVPEFGIEKRVHVDQM 1318
>gi|341883924|gb|EGT39859.1| hypothetical protein CAEBREN_09077 [Caenorhabditis brenneri]
Length = 850
Score = 322 bits (824), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 198/575 (34%), Positives = 293/575 (50%), Gaps = 70/575 (12%)
Query: 206 LVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP 265
L A+I+EW +S + + ++ + G GE+E + I+YE+ I FS E L+ LP
Sbjct: 261 LYTAKINEWRADSIYAEGTLIKLLGMSGEIETETERIVYEHQIDHREFSDECLASLPISS 320
Query: 266 ---WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISR------VGVHIA 316
W++P++E R+D R +FTIDP TA DLDDAL + + D + +GVHIA
Sbjct: 321 AEDWKIPEKEFEYRRDFRQEIVFTIDPKTARDLDDALHAKHIDDCDGKGTPGVEIGVHIA 380
Query: 317 DVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN 376
DV++F+ T LD A R S Y+ Q IPMLP +L E++ SLNPGVDRLAFS + LN
Sbjct: 381 DVTFFLKEDTELDKWASERGNSTYLSQLVIPMLPRILCEQLCSLNPGVDRLAFSTVFKLN 440
Query: 377 SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVR 436
G++ D W GR++IRS KL+YEHAQD I+ E T E P G + ++
Sbjct: 441 YEGELKDVWFGRSIIRSRVKLAYEHAQDFIEHP---EKDFTTEELPPISDGNTPF-EIRE 496
Query: 437 SIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLL 496
L+ ++++L+ +R ++GALR+E K F DE P + +D N L EEFMLL
Sbjct: 497 KTLMLHRIAQLLRKQRESNGALRIELPKLKFALDEDKKPQGVSIYEIKDSNKLVEEFMLL 556
Query: 497 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR 556
AN A+ I AFP+SALLR HP P + +++ C+K G LD +SG SL + +
Sbjct: 557 ANMEVAKKIGSAFPNSALLRNHPPPKEKMIKDVAEQCAKIGFPLDGKTSGMLSTSLRKYQ 616
Query: 557 EKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 616
+ D + ++ + +PMQ A YFC+ D + + HYAL YTHFTSP+RRYPD
Sbjct: 617 GNTRLDMCIRQVISSLTIKPMQQAKYFCTADMP-PSFFHHYALNVDHYTHFTSPIRRYPD 675
Query: 617 LVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVA 676
++VHR L A+L + E D+D E
Sbjct: 676 VIVHRQLAASL----------------GYNEKC----------DRDPKE----------- 698
Query: 677 ALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPR 736
+ N+ T CND K A + + LY + + + +A VL +
Sbjct: 699 -----------IQNICTRCNDTKQASKEASEESATLYFGVFIHSVGKMTCQAVVLGVMDL 747
Query: 737 FMTIYIEKLAIERRIYYDEV--------EGLIVEW 763
+ + + + +R+Y D++ E L + W
Sbjct: 748 SFDVLVVEYGVVKRVYVDKMKREFDKIPEQLTLHW 782
>gi|389747280|gb|EIM88459.1| RNB-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 1153
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 211/651 (32%), Positives = 324/651 (49%), Gaps = 75/651 (11%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLN-----VNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ 169
G VV+++ER P + G +G L + + R+ K + ++ + +
Sbjct: 412 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDKGDEPRRAIERPKIVW 471
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
PT + P + + + P ++ DA + +L A I S P ++
Sbjct: 472 FKPTDKRVPLIAIPTEQAPPDF---VQNSDAYVN-KLFVACIKRHPISSLHPFGTLVEEL 527
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 289
G G++E + +A+L + FS + CLP +PW +P+ E+ RKDLR IFTIDP
Sbjct: 528 GPIGDIEVETSALLKDCNFPNEDFSESVMKCLPPMPWSIPEREVEVRKDLRKERIFTIDP 587
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
TA DLDDALS+ DG VG+HIADV++FV P TALD +A+ R+TSVY++QR + ML
Sbjct: 588 DTAKDLDDALSVSLNEDGTYDVGIHIADVTHFVKPNTALDRDARKRATSVYLVQRAVSML 647
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P LSEE+ SL PGVDRLAFS+ + V +W G+T+I+S KL+Y +AQD+I+GK
Sbjct: 648 PPALSEELCSLVPGVDRLAFSVVLTMTKDARVTKKWFGKTIIKSAAKLTYNNAQDVIEGK 707
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
LG+ + + + S + IK+L +++K L+ +RF +GAL LE+ + F
Sbjct: 708 -------PLGDVV--VIPEHDASAIEHDIKALNDLAKELRTRRFENGALALESPRLTFKL 758
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
G P D R D + L EEFMLL N T A+ IA P+ ALLRRH P R+L
Sbjct: 759 GADGLPIDCSQYARFDAHELVEEFMLLTNCTVAQQIAVNLPEQALLRRHDIPMERRLNML 818
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
++ G +D SSSG +S +D +L + + A YFC+G
Sbjct: 819 AERAARLGYTMDVSSSGAIMRSFNSI-----EDPTARRLLQLLSYKATHTAKYFCAG-ML 872
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
D + HYAL P+YTHFTSP+RRY D++VHR L A L+ G
Sbjct: 873 DIAKYHHYALNVPLYTHFTSPIRRYADVLVHRQLEAVLQG-----------------AGA 915
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F D+DA + V CN ++ + + ++
Sbjct: 916 DTKFT----MDRDA------------------------VAKVTQQCNIKRDSAKLAQEQS 947
Query: 710 VKLYMWILLKKKEV----LLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
LY+ +L+ ++ +A+V+ + + I + IE+R++ D++
Sbjct: 948 AHLYLCVLISDLTTRYGPVVRQAKVVGVLDAAFDVLIPEFGIEKRVHVDQM 998
>gi|331222929|ref|XP_003324138.1| hypothetical protein PGTG_06040 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309303128|gb|EFP79719.1| hypothetical protein PGTG_06040 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1421
Score = 321 bits (823), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 206/669 (30%), Positives = 331/669 (49%), Gaps = 100/669 (14%)
Query: 114 KRP--TGRVVSIIERSPRR--DGIVGFLNVN---------------QWFNYKGGSRKDAK 154
+RP G +V+++ER P + G +G L + + + +GG R++ +
Sbjct: 664 QRPNFAGHIVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGVDLRGGQREEQR 723
Query: 155 KNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEW 214
+ + PT + P + + V P + +T L A I W
Sbjct: 724 P----------KIVWHRPTDKRVPLIAIPVDQAPADFLADPNKYSST----LFIAGIKRW 769
Query: 215 NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELL 274
S P ++ G G++E + NA+L + FS + CLP +PW +P+ E
Sbjct: 770 PITSLHPFGTLVEELGPIGDIEVETNALLKDCNFTSEEFSENVVKCLPPLPWTIPEREYE 829
Query: 275 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 334
R+D R+ FTID +TA DLDDAL I + DG VGVHIADV++FV PGTALD EA+
Sbjct: 830 VRRDFRSQVAFTIDGATARDLDDALHISKNEDGTFEVGVHIADVTHFVKPGTALDREARK 889
Query: 335 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 394
R+T+VY++QR +PMLP LSE + SL+PG D+L FS + + G V+D W G+++I S
Sbjct: 890 RATTVYLVQRAVPMLPPTLSEHLCSLSPGQDKLTFSAVFKMTPQGRVIDTWFGKSIICSS 949
Query: 395 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEW---SDVVRSIKSLYEVSKILKDK 451
KL+Y+ Q ++ ++S+T P+L + E + + S+++L ++S+ ++ +
Sbjct: 950 AKLTYDSVQQVLS-----DNSST-----PELKVEKEGVTVNQICDSLRALGQLSRQMRAR 999
Query: 452 RFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 511
RF +G LR++N + D G P D + ++ L EEFMLLAN A+ +A P+
Sbjct: 1000 RFDEGCLRIDNIRLDIKLDAEGLPEDCSVVLGDEAKQLIEEFMLLANSAVAKKVAAGLPE 1059
Query: 512 SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN 571
A+LRRH AP R+L F +K G ++DTSS+G +S++ + K + + +L
Sbjct: 1060 QAMLRRHEAPIDRRLEGFAKRAAKMGFEVDTSSAGALMKSIKSMEQAGKAPHFVLQLL-- 1117
Query: 572 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
+T+ M A YFC G D W HYAL PVYTHFTSP+RR+ D++VHR L A L
Sbjct: 1118 -STKAMVKAKYFCGGAL-DIAKWSHYALNLPVYTHFTSPIRRFADVMVHRQLEAVLS--- 1172
Query: 632 LYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNV 691
+ +K+ + D +
Sbjct: 1173 ------------------------------------------TTCDVKFTMD-PDSVSKC 1189
Query: 692 ATHCNDRKLACRNVKDACVKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAI 747
A CN +K A R ++ L++ +L+ K ++ A V+ + + + I
Sbjct: 1190 AQFCNIKKHAARLAEEQSQHLFLCVLIADLTAKYGPVIRSANVIGVWDEAFDVAVPDFGI 1249
Query: 748 ERRIYYDEV 756
E+R++ D++
Sbjct: 1250 EKRVHVDQM 1258
>gi|196011227|ref|XP_002115477.1| hypothetical protein TRIADDRAFT_10828 [Trichoplax adhaerens]
gi|190581765|gb|EDV21840.1| hypothetical protein TRIADDRAFT_10828 [Trichoplax adhaerens]
Length = 557
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 201/588 (34%), Positives = 291/588 (49%), Gaps = 56/588 (9%)
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
P + P++ V + P +K EE +L I EW + F VL F
Sbjct: 4 FIPRDHRIPRIRVPLTQCPKDFQKSSEEPYP----DLFFVEIVEWKATTHFALGKVLRRF 59
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 289
GR GE++ + AIL E + S FS + L LP W++ +++L RKDLR+ CIFTIDP
Sbjct: 60 GREGEIDSETQAILAEYQVDTSPFSDQILKDLPS-DWQISKKQLKCRKDLRSSCIFTIDP 118
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
+TA DLDDALS E L +G VGVHIADVSYFV T +D A R+ + Y++Q+ I ML
Sbjct: 119 ATAKDLDDALSCEPLENGNFEVGVHIADVSYFVRENTPVDTLASKRTLTFYLVQKAITML 178
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P L E SLNPG DRL FS+ W+L G +V W G++VI SCCK++Y+HAQ ++D
Sbjct: 179 PPALCENYCSLNPGEDRLTFSVVWELTPNGKIVKEWFGKSVIHSCCKMNYDHAQSVLDN- 237
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
S + +PQ+YG S +V I +L ++++ L R + GA+ L K F
Sbjct: 238 ---PSKTWTSQDFPQIYGDHTVSKIVSVILNLNKIAQELLKGRLSSGAIELNQPKQWFSL 294
Query: 470 D-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 528
D + G P ++ N L +EFMLLAN + A+ I F +A LRR P+P + + +
Sbjct: 295 DSDSGYPTSCKTYEMKESNGLVKEFMLLANISVAKKILTGFTSTAFLRRQPSPCAQMISK 354
Query: 529 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF 588
+C + D + SL KD + + + R M A YFCSG F
Sbjct: 355 VTNYCKNFDIHCDGDNYRSLQASLLAIGTNDKDG-IHTQAVSHIFLRAMTRAEYFCSGTF 413
Query: 589 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREG 648
+ + HY L P+YTHFTSP+RRYPD++VHR L LE
Sbjct: 414 ESHDSFKHYCLNIPLYTHFTSPIRRYPDIIVHRQLFNLLE-------------------- 453
Query: 649 VRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDA 708
+S + + A L+ ++A CN+RKLA NV
Sbjct: 454 ---------------GKSQDNSMITNTAKLE----------SIAKVCNERKLAQFNVGKK 488
Query: 709 CVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+L+ ++ E L +A ++L + + K + +R+Y + V
Sbjct: 489 SSELFFSFFVRSCEPLHEDAIAISLLDSSFDVLLVKYGLVKRVYCNNV 536
>gi|412986613|emb|CCO15039.1| ribonuclease R [Bathycoccus prasinos]
Length = 1009
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 233/691 (33%), Positives = 360/691 (52%), Gaps = 75/691 (10%)
Query: 96 DGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK 155
DG+ IE L RP G VV IIE SP+R +VG++ V++ +++
Sbjct: 201 DGIEEIELL----------RPIGTVVKIIEPSPKRTRLVGYI-VDE--------KRNNTN 241
Query: 156 NRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARID-EW 214
+ ++ ++ +L PT + P D+ S+ + + + + + A+ ID +
Sbjct: 242 SNTNSKNKSKKSFRLKPTDSRMPTC-----DIDASLSELKDLENVPENVIVFASMIDTDG 296
Query: 215 NEESPFPQA-HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-------CVPW 266
+ +A V + G +E I+ EN I F+ E L+CLP +
Sbjct: 297 TAKGALSRACSVERIIGPSDSIETHTAKIILENDIKDEPFTDEVLACLPKEWNDDNGIEL 356
Query: 267 EVPQEELLSRKDLR-NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
E E+ +RKD R + TIDP TA DLDD+L R+ RV VHIADVS+FV P
Sbjct: 357 ENEDEKEPARKDFRSDIGTCTIDPETARDLDDSLFATRIDKNTIRVCVHIADVSHFVQPN 416
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL-NSAGDVVDR 384
TALD EA +R+TS Y+ R +PMLP LLSE SLNPGVDR A S W + S G +++
Sbjct: 417 TALDEEALIRATSNYLCDRVVPMLPRLLSEIACSLNPGVDRYAMSCEWIIRESDGKILEE 476
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFD----------VESSNTLGEG-WPQLYGQFEWSD 433
W GR+V+RS KLSY AQ ++D FD VE GEG Q +
Sbjct: 477 WFGRSVMRSRAKLSYGDAQRMLDA-FDASMTDEAIVNVEKEKVSGEGKIEQSSKDNVLLE 535
Query: 434 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEE 492
VV+S++ L V+K L++ R +G++RL+ +K F D E P + + N + E+
Sbjct: 536 VVKSVRLLRSVAKTLRENRVENGSVRLDQAKIGFEIDQETKLPKRAFQYELRESNRVIED 595
Query: 493 FMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ-LDTSSSGQFHQS 551
MLLAN+ A+ IA FP+ ALLR HP PN +K+ E F +GL D S+SG H+S
Sbjct: 596 LMLLANRRVAKRIADYFPNVALLRLHPPPNEKKMFELREFAQANGLNDFDCSTSGALHRS 655
Query: 552 LEQAREKLK--DDYV-------LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFP 602
LE+ RE ++ D+ + +++I+ AT+PMQLA YFC+G ++ W HYALAF
Sbjct: 656 LERLRETVRRTDETMNNGGVNAIYEIINLLATKPMQLAQYFCTGQLPEEESWRHYALAFD 715
Query: 603 VYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKD 662
YTHFTSP+RRYPD++VHR L A+L ++ + + + + F K
Sbjct: 716 RYTHFTSPIRRYPDILVHRLLRASL-----------VVEEQEKNKKKQKNKMMSFFSKKK 764
Query: 663 AAESLEGREALSVAALKYGVPCA-DILVNVATHCNDRKLACRNVKDACVKLYM-WILLKK 720
+++ + ++ S + Y +P + + +AT CN +K + + +D +Y + L +
Sbjct: 765 SSDDVVVKK--SNKLVDYLLPTSTSSCIQIATQCNIKKASAKVAQDEHSFVYFCYHLARN 822
Query: 721 KEVLLSEARVLALGPRFMTIYIEKLAIERRI 751
V L+ AR+ +G + + ++ + E ++
Sbjct: 823 PTVTLAIARI--VGRKHLACFLPEFGFEVKV 851
>gi|118375621|ref|XP_001020994.1| RNB-like protein [Tetrahymena thermophila]
gi|89302761|gb|EAS00749.1| RNB-like protein [Tetrahymena thermophila SB210]
Length = 1250
Score = 318 bits (816), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 217/663 (32%), Positives = 332/663 (50%), Gaps = 95/663 (14%)
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPK 176
++V I E + D IVG+L Q +K+ KK P + K
Sbjct: 595 VAKIVYIFENPYQNDNIVGYLEEVQ----DNRQKKNGKKK-----------YWFIPKYSK 639
Query: 177 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 236
PKM+ + + D ++EE D I V ++ +W+EES +PQA + G G++E
Sbjct: 640 LPKMLPV--EFSDEFYHQVEENDIDISKTYVVGKMKDWSEESYYPQATISECLGERGDIE 697
Query: 237 PQINAILYENAICCSGFSPESLSCLPCV--------PWEVPQEELLSRKDLRNFCIFTID 288
+ + +L E + F+P + L + +P+ E R DL I TID
Sbjct: 698 VECDTLLKEFNVYNQDFTPATEEYLNKYREQLNDNGEYVIPESEKNIRWDLTKEIICTID 757
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P A DLDDALSI+ L D I +GVHIADVS+FV P T+LD +A++R+TSVY++ R IPM
Sbjct: 758 PHDAKDLDDALSIKYLHDDIYEIGVHIADVSHFVQPNTSLDDDARLRTTSVYLVHRVIPM 817
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW-----IGRTVIRSCCKLSYEHAQ 403
LP LL E + SLNP V+RLAF++F+ + G+V+ W IG++VI+SC K SY+ Q
Sbjct: 818 LPRLLCENLCSLNPNVERLAFTVFFQMKENGEVL--WDGPIRIGKSVIKSCNKFSYDTVQ 875
Query: 404 DIIDGKFDVESSNTLGE-GWPQ--LYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 460
+I+ K ++S L E PQ + Q + D++ L ++ ++ RF G L +
Sbjct: 876 MMIEKK--IKSPGELPEHNIPQQGVDSQKMFDDILL----LAKLGMNRRESRFKGGVLSI 929
Query: 461 ENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
E+ K F +E P D L R+D F+ EEFMLLAN+ A+ + + A+LR+H
Sbjct: 930 ESVKKRFKLNEKLWPVDFTLEERKDAMFVVEEFMLLANQIVAKEMVKQCKSLAVLRQHCY 989
Query: 521 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD---ILINYATRPM 577
P+ K ++ K G Q+D SS +QS+E + KDD + F+ L +
Sbjct: 990 PSDIKQKQLNVIAKKFGHQIDFSSLQAINQSIEDIK---KDDKLSFEKKLFLKKQMFLVL 1046
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
+ A YF + ++W H+AL F VYTHFTSP+RRYPDL+VHR + + L+
Sbjct: 1047 EQALYFVADQLP-PSEWKHFALNFDVYTHFTSPIRRYPDLLVHRVMYSILQ--------- 1096
Query: 638 RMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCND 697
Y +DA + +E LS+ + CN+
Sbjct: 1097 ---------------------YKQDAVKYIEKSSLLSIMEV----------------CNE 1119
Query: 698 RKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVE 757
K + V D C K++M + LK V S+ V++ G MTI+I +R +Y+ + +
Sbjct: 1120 NKAKSKQVSDNCQKIFMCLYLKDHSV-QSKGMVISFGVTSMTIFIPDHETQRTVYFKDYK 1178
Query: 758 GLI 760
++
Sbjct: 1179 NIL 1181
>gi|336373570|gb|EGO01908.1| hypothetical protein SERLA73DRAFT_48904 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1158
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 193/524 (36%), Positives = 281/524 (53%), Gaps = 33/524 (6%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDR 165
G VV+++ER P + G +G L + + G R D + R + P
Sbjct: 401 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGDEPR-RGPIERP-- 457
Query: 166 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 225
+ + PT + P + + + P ++ +A + +L A I S P +
Sbjct: 458 KIVWFKPTDKRVPLIAIPTEQAPPDF---VQNSEAYVN-KLFVACIKRHPISSLHPFGTL 513
Query: 226 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 285
+ G G++E + +A+L + F L CLP PW +P+ E RKD+R +F
Sbjct: 514 VEELGPIGDIEVETSALLKDCNFPTEDFGDNVLKCLPPTPWTIPEREYEVRKDMRQDLVF 573
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
T+DP +A DLDDA+S++ DG +G+HIADVSYFV P TALD +A+ R+TSVY++QR
Sbjct: 574 TVDPGSAKDLDDAMSVKANDDGTYDIGIHIADVSYFVKPNTALDRDARKRATSVYLVQRA 633
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 405
+PMLP LSEE SLNPG +RLAFS + + VV++W G+TVI+S K+SYE AQ +
Sbjct: 634 VPMLPPTLSEEACSLNPGQERLAFSAIFTMTKDAKVVNKWFGKTVIKSAAKISYEKAQKV 693
Query: 406 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
IDG + LG+ + + + + IK L ++K L+ +RF DGAL L +
Sbjct: 694 IDG-------HVLGDV--PVTPDHDAAAIEHDIKVLNSLAKQLRARRFQDGALSLSTMQL 744
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
F DE G P D D N L EEFML+ N + A+ +A P+ ALLRRH P R+
Sbjct: 745 QFKLDESGLPIDCWQHESSDANELVEEFMLMTNVSVAQRVAVHLPEQALLRRHDNPIDRR 804
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
L F + G ++DTSS G +S + L ++L + AT A YFC+
Sbjct: 805 LAAFSERAKRLGYEIDTSSPGAIMRSFQSVTNPTARR--LLELLSHKAT---HRAKYFCA 859
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
G D + HYAL P+YTHFTSP+RRY D++VHR L + L++
Sbjct: 860 G-MLDIAKYNHYALNVPLYTHFTSPIRRYADVLVHRQLESVLQS 902
>gi|391326101|ref|XP_003737563.1| PREDICTED: uncharacterized protein LOC100897422 [Metaseiulus
occidentalis]
Length = 1700
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 208/619 (33%), Positives = 319/619 (51%), Gaps = 101/619 (16%)
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
+PT P++P+M + + P + KR + + T L A++++W+ + P+ +L +
Sbjct: 1089 FSPTDPRFPRMCIPAAECPKDLIKRPKHFEDT----LFCAQLEDWDAQEVLPKGKLLKIV 1144
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP-WEVPQEELLSRKDLRNFCIFTID 288
G+ GE+E + AIL N I + L + P W++P EEL SRKD R +FTID
Sbjct: 1145 GKKGEIEAETTAILSNNGIDDDCIDDDVLRNMDVSPNWKIPAEELESRKDYRKELVFTID 1204
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P +A DLDDALS+++++D + VG+HIADVSYFV T LD +AQ R+TSVY++QR +PM
Sbjct: 1205 PMSARDLDDALSVKKIADDLYEVGIHIADVSYFVKRNTPLDSKAQSRATSVYLVQRVVPM 1264
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP LL + SL+PG D+L FS+ + +NS G+V + W GRT+I SCCK+SYE AQDIID
Sbjct: 1265 LPRLLCNNLCSLHPGADKLTFSVVFKMNSQGEVFEEWFGRTIINSCCKMSYELAQDIID- 1323
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 468
D + + T E P ++ + ++ L +++ ++ +RF +GALR++ K F
Sbjct: 1324 --DPKRTWT-PEELPPIFNGHSIGRISEALVVLQDMATHMRKRRFDEGALRIDQLKLCFQ 1380
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL-- 526
G P + + L EEFMLLAN A I R FP A LRRH P+ R++
Sbjct: 1381 LAGNGVPQGFSVYQHTASHRLIEEFMLLANMAVARKIRREFPALAFLRRHSHPDERRINI 1440
Query: 527 --REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYA----------- 573
+EFEA G+++D G +S++ + LK+ ++ N A
Sbjct: 1441 IAKEFEAL----GIRID----GFDAKSMQSGLDTLKNQMFKLEVAENIAESLRVSECEAR 1492
Query: 574 -----------TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
++P A Y + + D H+ALA P+YTHFTSP+RRY DLVVHR
Sbjct: 1493 ELLLRAFAVILSKPFSPAQYVVAQG-QTPEDLRHFALAVPLYTHFTSPIRRYADLVVHRL 1551
Query: 623 LNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGV 682
L +L E RE D+ A+E
Sbjct: 1552 LAQSLGYEV--------------RES-----------DERASE----------------- 1569
Query: 683 PCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEAR------VLALGPR 736
L +A+ CN+RK A + + A ++L++W ++ L+E+R V+ + R
Sbjct: 1570 -----LRKIASRCNERKRAAKCAEVASIELFVWNFVRS----LTESRLSDDFIVVGVLDR 1620
Query: 737 FMTIYIEKLAIERRIYYDE 755
+ + + I +R Y D+
Sbjct: 1621 SVDVVSLRTGIVQRAYKDK 1639
>gi|392575246|gb|EIW68380.1| hypothetical protein TREMEDRAFT_32205 [Tremella mesenterica DSM 1558]
Length = 1204
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 218/654 (33%), Positives = 322/654 (49%), Gaps = 81/654 (12%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVN-------QWFNYKGGSRKDAKKNRSSLSVPDREY 167
G VV+++ER P + G +G L + Q + +++K R + + P +
Sbjct: 485 AGHVVAVVERMPAQLFSGQLGLLRPSSVATKEKQDLERRERGEEESKVKRGNEAKP--KI 542
Query: 168 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 227
+ PT + P M + P ++ DA E VA I W S P ++
Sbjct: 543 VWFKPTDKRVPLMAIPTDQAPADF---MDNPDAYAERLFVAC-IKRWPISSLHPFGTLVE 598
Query: 228 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTI 287
G G+ E + A+L + FS +L C+P +P+ +P+ ++ +R DLR +FTI
Sbjct: 599 ELGPIGDCEVETAALLKDCNFPTEDFSESALKCVPPLPFAIPERDIEARTDLRGERVFTI 658
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP A DLDDALSI ++G VGVHIADVSYFV +ALD EA+ R T+VY+ QR +P
Sbjct: 659 DPPNAKDLDDALSISSDAEGNYLVGVHIADVSYFVKTNSALDREARRRGTTVYLAQRAVP 718
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVI-RSCCKLSYEHAQDII 406
MLP LSE + SL PG +RLAFS + ++ G V+D+ GR+VI RSC +LSY Q++I
Sbjct: 719 MLPPQLSEGLCSLRPGEERLAFSAMFIVSKDGVVLDKSFGRSVINRSCAQLSYSDVQNVI 778
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
G P S V I++LY +S L+D+R +GA+ + K
Sbjct: 779 TGSLLP----------PDKIVAHSTSAVEDDIRALYVLSAKLRDRRLDNGAMLAKKIKLS 828
Query: 467 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
F DE G P D + D N L EEFMLLAN + A+VIA P+ ALLRRH P R+L
Sbjct: 829 FTLDEEGRPIDCRSQKKTDSNMLVEEFMLLANTSIAQVIASGLPEQALLRRHEPPIERRL 888
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 586
F K G D +S+G +S E + +D V ++L + MQ A YFC+G
Sbjct: 889 AGFVKRAEKLGYTFDPASAGTLQKSFEAVED--EDAAVCLELL---KRKSMQQARYFCTG 943
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 646
D + H+AL P+YTHFTSP+RRY D++VHR L+A L K
Sbjct: 944 -MLDIAKYWHWALNIPLYTHFTSPIRRYADVLVHRMLDACLTTNPTDVK----------- 991
Query: 647 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 706
D+DA + A CN ++ + +
Sbjct: 992 ----------FHMDRDA------------------------VAKCAQQCNMKRQNAKLAE 1017
Query: 707 DACVKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
D + LY+ +L+ +K ++ EARVL + ++I + +E+R++ D++
Sbjct: 1018 DQSIHLYLCMLIHDLTEKYGPVVREARVLGVLDAAFDVFIPEFGVEKRVHVDKM 1071
>gi|393246082|gb|EJD53591.1| RNB-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 1171
Score = 317 bits (811), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 197/524 (37%), Positives = 286/524 (54%), Gaps = 35/524 (6%)
Query: 118 GRVVSIIERSPRR--DGIVGFLNVNQWFNY-KGGSRKDAKKNRSSLSVPDR------EYI 168
G VV+++ER P + G +G L + K + + ++ S P R + +
Sbjct: 410 GHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDKSPEEPKRAPTERPKIV 469
Query: 169 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P ++ +A ++ VA I S P ++
Sbjct: 470 WFKPTDKRVPLIAIPTEQAPPDF---VQNSEAYVDRLFVAC-IKRHPISSLHPFGTLVEE 525
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTID 288
G G+VE + +A+L + F +L CLP +PW +P+ E RKDLR +FTID
Sbjct: 526 LGPIGDVEVETSALLKDCNFPTEEFPDNALKCLPPIPWTIPEREFEVRKDLRADRLFTID 585
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P A D DDALSI+ DG VGVHIADVSYFV P TALD +A+ R+TSVY++QR +PM
Sbjct: 586 PPEAKDYDDALSIKANDDGTYSVGVHIADVSYFVKPNTALDRDARKRATSVYLVQRAVPM 645
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP LSE++ SL PG DRLAFS + L G V+D+W G+++I+S +L+Y AQ +IDG
Sbjct: 646 LPPTLSEQICSLVPGEDRLAFSFIFTLTRDGRVLDKWYGKSIIKSSARLTYRDAQVVIDG 705
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 468
+ +++S GE + + V IK+L+ ++K + ++R +G L K F
Sbjct: 706 Q-PLDASKVSGEQ--------DAAAVAEDIKTLWSIAKDIHNRRKDEGYLHSHRDKLKFT 756
Query: 469 FDEYGTPYDSVLSGREDLNFLFEE-------FMLLANKTAAEVIARAFPDSALLRRHPAP 521
D G P D + + + L EE FMLL N TAA+ IA P+ ALLRRH P
Sbjct: 757 LDNKGLPADCEPYEQVEAHSLVEEASLASLYFMLLTNITAAQQIAVHLPEQALLRRHEEP 816
Query: 522 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 581
R+L+ F S+ G Q+DT+S+G +SLE + + LFD+L+ R A
Sbjct: 817 VERRLKAFSERASRMGYQIDTTSAGSIQKSLETITD--PEARRLFDLLVRKTNRS---AK 871
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 625
Y+C+G D + HYAL P+YTHFTSP+RRY D++VHR L A
Sbjct: 872 YYCAG-MLDIAKYNHYALNVPLYTHFTSPIRRYADILVHRQLEA 914
>gi|395328831|gb|EJF61221.1| RNB-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 1468
Score = 315 bits (807), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 211/651 (32%), Positives = 333/651 (51%), Gaps = 76/651 (11%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR-----EYIQ 169
G VV+++ER P + G +G L + + + ++ P R + +
Sbjct: 727 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGDEPRRPIERPKIVW 786
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
PT + P + + + P + E +L A I S P ++
Sbjct: 787 FKPTDKRVPLIAIPTEQAPPDFVQNSE----AYANKLFVACIKRHPISSLHPFGTLVEEL 842
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 289
G G++E + +A+L + FS + CLP PW +P+ E RKDLR+ +FTIDP
Sbjct: 843 GPIGDIEVETSALLKDCNFPTEEFSDNVIKCLPPTPWSIPEREFDVRKDLRSERVFTIDP 902
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
A DLDDA+S++ DG +GVHIADVS+FV P TALD +A+ R+TSVY++QR +PML
Sbjct: 903 DDAKDLDDAVSVKANDDGTYDIGVHIADVSFFVKPNTALDRDARKRATSVYLVQRAVPML 962
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P LSE+V SL PG DRLAFS+ + ++ VV +W GRT+I+S KLSY AQD+IDGK
Sbjct: 963 PPTLSEQVCSLLPGQDRLAFSVIFTMSKDAKVVKKWFGRTIIKSAAKLSYAKAQDLIDGK 1022
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
TLG+ +P + + + IK L++++K L+++RF +G ++ + + F
Sbjct: 1023 -------TLGD-FP-VDPAHDAEGIAHDIKVLHDIAKQLRERRFQNGCVKTHSLRLAFKL 1073
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE G P D R + N L EEFMLL N A+ +A F + A+LRRH +P R+L F
Sbjct: 1074 DENGLPIDCGQYQRNEANNLIEEFMLLTNIAVAQQVAVHFSEQAMLRRHDSPIERRLNAF 1133
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
++ G ++DTSS +SLE + + ++L+ A+ A YFC+G
Sbjct: 1134 VERAARLGYKVDTSSVATLMKSLETVEDPTA--RTILELLLQKAS---PRAKYFCAG-ML 1187
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
D +GHYAL P+Y+HFTSP+RRY D++VHR L+A L+ PK N
Sbjct: 1188 DIAKYGHYALNVPLYSHFTSPIRRYADILVHRQLDAILQGGS--------EPKFN----- 1234
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
D+DA + VA CN ++ + + ++
Sbjct: 1235 ---------MDRDA------------------------VAKVAQQCNIKRDSAKLAQEQS 1261
Query: 710 VKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
LY+ +L+ ++ ++ +A+V+ + + + + IE+R++ D++
Sbjct: 1262 AHLYLCVLVSDLTQRYGPVIRQAKVIGVLDAAFDVLVPEFGIEKRVHVDQM 1312
>gi|393215496|gb|EJD00987.1| RNB-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 968
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 209/655 (31%), Positives = 325/655 (49%), Gaps = 83/655 (12%)
Query: 118 GRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDRE 166
G VV+++ER P + G +G L + + G R + ++ R + P +
Sbjct: 230 GHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRGEEQR-RGPIERP--K 286
Query: 167 YIQLTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 225
+ PT + P + + + P D ++ D +L A I S P +
Sbjct: 287 IVWFKPTDKRVPLIAIPTEQAPPDFVQNSEAYAD-----KLFVACIKRHPISSLHPFGTL 341
Query: 226 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 285
+ G G +E + +A+L + F+ L CLP PW +P+ E R DLR +F
Sbjct: 342 VEELGPIGNIEVETSALLKDCNFPTEDFTDNVLKCLPPTPWSIPEREYEIRTDLRQERVF 401
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
TIDP TA D DDA+ I++ DG VGVHIADVS+FV P TALD +A+ R+TSVY++QR
Sbjct: 402 TIDPDTAKDFDDAVHIKKNEDGTYDVGVHIADVSHFVKPNTALDRDARKRATSVYLVQRA 461
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 405
+PMLP LSE++ SL PG +RL FS+ + + G V + +T+I+SC +L+Y AQ++
Sbjct: 462 VPMLPPTLSEQICSLVPGQERLTFSVLFTMTEDGKVTKKRFEKTIIKSCARLTYTDAQNV 521
Query: 406 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
+DGK G + +F+ D+ +K L ++++ L+ KR+ G L L++
Sbjct: 522 LDGK---------PLGSVPVSPEFDAVDIEHDLKVLNDLARNLRKKRYEAGTLSLDSLHL 572
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
F DE G P D+ R D + L EEFMLL N A+ I P+ ALLRRH P R+
Sbjct: 573 TFALDENGLPTDTSAYERTDSHKLIEEFMLLTNIAVAQQIGHHLPEQALLRRHEEPIERR 632
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
L F+ ++ G DTSS+G F +S + + ++ L I+ A + M A YFC+
Sbjct: 633 LIIFKERAARLGYTFDTSSAGAFMRSFDAMED--QNARKLLQII---AYKAMHTAKYFCA 687
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNH 645
G D + HYAL P+YTHFTSP+RRY D+VVHR L +
Sbjct: 688 G-MLDIAKYSHYALNVPLYTHFTSPIRRYADIVVHRQLES-------------------- 726
Query: 646 REGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNV 705
IF + + AE+ + SVA VA CN +K + +
Sbjct: 727 -----------IFVNNNGAEAKFSMDRDSVA-------------KVAQQCNIKKESSKLA 762
Query: 706 KDACVKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
++ LY+ +L+ ++ ++ A V+ + + I + IE+R++ D++
Sbjct: 763 QEQSTHLYLCVLIADLTQRYGPVVRPATVVNVLDAAFDVLIPEFGIEKRVHVDQM 817
>gi|357628384|gb|EHJ77732.1| putative exosome complex exonuclease RRP44 [Danaus plexippus]
Length = 963
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 207/648 (31%), Positives = 329/648 (50%), Gaps = 85/648 (13%)
Query: 109 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 168
S +K+ GRVV I E+ R I G+L + D + R+ L VP R+Y
Sbjct: 334 SDSSSKQRKGRVVFIKEKVHTRKCI-GYLKL----------MPDKNRQRA-LFVP-RDY- 379
Query: 169 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
+ P++ + PD+ + E L A I +W + F ++
Sbjct: 380 -------RIPRLNIPFTSWPDNFYHE----SKSYENTLFLASIFDWFDVR-FALGKLICN 427
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTID 288
G+ G+++ + AIL + + + F + P + + +P+EE+ SR+D R+ CIF+ID
Sbjct: 428 IGQSGDMQTETKAILAQMDLDITPFGEDVRHLFPRLDFIIPEEEIRSREDCRHLCIFSID 487
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P D+DDA+S +L++G +GVHI+DVSYF+ GT LD + ++T++YM++R M
Sbjct: 488 PINTRDIDDAVSCRKLANGNYEIGVHISDVSYFLHEGTLLDEKVSEKATTIYMVERAYHM 547
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP L + SL PG+D+LAFS+FW++ G V++ RTVI SCC+L+Y+HAQ ++D
Sbjct: 548 LPDELC-MLCSLFPGIDKLAFSVFWEITDDGIVLNHRFSRTVIHSCCQLAYDHAQAVLDE 606
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF- 467
K D E S +P++Y F + D+ +IK L ++S I + +RF +GALR++ K F
Sbjct: 607 KEDAEKS------FPEIYNGFTYKDISETIKVLGKISAIFRRRRFDNGALRIDQPKIAFH 660
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
L G P + + + L EEFMLLAN T A+ I P A LR HPAP+ L+
Sbjct: 661 LSAANGLPDSYWIYESRESHQLIEEFMLLANMTVAKRIHDDHPKLAFLRCHPAPSNYLLK 720
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 587
+ E G+ +D SS+G H+SL ++ D +L T+PM A YFC+
Sbjct: 721 QLEKSLKPLGIDIDISSAGNLHRSLTDYLDQNSLDKGKAMVLSMLCTKPMTRAKYFCAAS 780
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL-YWKHRRMLPKNNHR 646
DD D+ HYAL P+YTHFTSP+RRY D++VHR L+A+L K+ W+
Sbjct: 781 CVDD-DFHHYALNVPLYTHFTSPIRRYADIMVHRLLSASLNYSKVPAWE----------- 828
Query: 647 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 706
D + VA +CN +K +
Sbjct: 829 --------------------------------------VDKVRMVAANCNKQKYNAKRAG 850
Query: 707 DACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYD 754
+ +LY ++ + +EA V+ + +++ + I + + RRI+++
Sbjct: 851 EMSTELYTLKYIEINSPVTAEAVVVDVKEKYIDVIITAMGLNRRIFFN 898
>gi|409079735|gb|EKM80096.1| hypothetical protein AGABI1DRAFT_113317 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1257
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 206/652 (31%), Positives = 328/652 (50%), Gaps = 77/652 (11%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ----- 169
G VV+++ER P + G +G L + + + ++ P R I+
Sbjct: 521 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRAEEPRRGPIERPKIV 580
Query: 170 -LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P ++ DA VA I S P ++
Sbjct: 581 WFKPTDKRVPLIAIPTEQAPPDF---VQNSDAYANRLFVAC-IKRHPISSLHPFGTLVEE 636
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTID 288
G G++E + +A+L + FS L C+P VPW +P+ E R+DLR+ I T+D
Sbjct: 637 LGPIGDIEVETSALLKDCNFPTEEFSDNVLKCIPPVPWAIPEHEFKGRQDLRDQRIITLD 696
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P A DLDDALS++ DG VGVHIADVSYFV P TALD +A+ R+TSVY++QR +PM
Sbjct: 697 PEDAKDLDDALSVKVNDDGTYDVGVHIADVSYFVKPNTALDRDARKRATSVYLVQRAVPM 756
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP +L E++ SL PG +RL FS+ + + V+ +W G+TVI+S ++SY AQ+++DG
Sbjct: 757 LPPMLCEQLCSLLPGQERLTFSVVYTMTKDAKVLKKWFGKTVIKSAGRISYREAQNVLDG 816
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 468
K + +++T+ E + D+ R I L+++++ L+ +R +GAL +++ + F
Sbjct: 817 K-PLSTASTIPE--------HDTQDIRRDIMVLFDLARQLRLERMRNGALIVDSMRLKFQ 867
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 528
D+ G P D + D N L EEFMLL N + A+ +A P+ LLRRH +P R+L
Sbjct: 868 LDDNGLPTDCREYDKYDSNTLVEEFMLLTNLSVAQHVAVHLPEQTLLRRHDSPLERRLIN 927
Query: 529 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF 588
F + G Q+DTSS+ +SL+ + L +L AT Q A YFC+G
Sbjct: 928 FVKRAERLGFQIDTSSASALMKSLDTITDPTARK--LLQLLCYKAT---QRAKYFCAG-M 981
Query: 589 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREG 648
D + HYAL P+YTHFTSP+RRY D++VHR L+A L+ G
Sbjct: 982 LDIAKYQHYALNQPLYTHFTSPIRRYADILVHRQLDAVLQG------------------G 1023
Query: 649 VRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDA 708
V +F D+DA + VA CN + + +
Sbjct: 1024 VDTKFT----MDRDA------------------------VAKVAQQCNIKNDSAALAQGQ 1055
Query: 709 CVKLYMWILLK----KKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
L++ +L+ + ++ +A+V+ + + + + IE+R++ D++
Sbjct: 1056 SAHLFLCVLISDLTYRYGPVIRQAKVINVLEAAFDVLVPEFGIEKRVHVDQM 1107
>gi|241177336|ref|XP_002399952.1| salivary protein Is3, putative [Ixodes scapularis]
gi|215495230|gb|EEC04871.1| salivary protein Is3, putative [Ixodes scapularis]
Length = 795
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 201/608 (33%), Positives = 306/608 (50%), Gaps = 90/608 (14%)
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
++ +P ++P+M++ P +R A L A + +W +S F Q +
Sbjct: 172 WLLFSPKDSRFPRMLIPSAQAPPGFFER----PADFSQTLFLAEMTKWLPDSTFAQGQLR 227
Query: 227 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 286
+ G+ G++E + AIL + F P+ L+ L W+VP+EEL R+D R+ +FT
Sbjct: 228 RLLGQAGDLEVETEAILESYEVDHGEFPPDILAHLD-QSWKVPEEELSRRRDFRSELVFT 286
Query: 287 IDPSTATDLDDALSIERLSDG-ISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
+DP TA DLDDALS L DG + VGVHIADVS FVLPGT LD A R+TSVY++Q+
Sbjct: 287 VDPKTARDLDDALSCRPLDDGTLWEVGVHIADVSNFVLPGTKLDQVALRRATSVYLVQQV 346
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 405
+PMLP LL +++ SL+PG D+L FS+ W + G V+D W GR+VIRSC KLSYEHAQD+
Sbjct: 347 VPMLPRLLCDQLCSLHPGEDKLTFSVVWTMTRDGRVLDEWFGRSVIRSCAKLSYEHAQDL 406
Query: 406 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
+D D + + GE P+L+G W+ V +++ L ++++ ++ +RF GALRL+ +
Sbjct: 407 MD---DPDRGHPEGE-LPELHGAHTWAQVAQALAVLGDMTRAMRSRRFDGGALRLDQVRV 462
Query: 466 VFLFDEYGTP-----YDSVLS-----GREDLNFLFEE-----FMLLANKTAAEVIARAFP 510
F ++ P Y+ S GR L + E F L T I
Sbjct: 463 AFSLNQDFQPVGFSVYEHTESHRWEEGRRGLKEITERSTKQTFCFLGGLTEVISIRTELV 522
Query: 511 DSAL--LRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 568
SA+ HPA + + S+ G F SL Q + + ++
Sbjct: 523 HSAISAAAYHPALSA---------------PVPVSAFGTFLLSLNQLLGSDEASHARLNV 567
Query: 569 LINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
L N +RPM++A+YFC+G D + HYAL P+YTHFTSP+RRY D++VHR L AAL
Sbjct: 568 LTNLLSRPMKMATYFCAGRRDDPDTFWHYALNVPLYTHFTSPIRRYADIMVHRLLGAALG 627
Query: 629 AEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADIL 688
Y + R PK L
Sbjct: 628 ----YSEPLRQSPKE--------------------------------------------L 639
Query: 689 VNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIE 748
+A HCND+K RNV+D ++L++++ +++ A V ++ + + +
Sbjct: 640 QGIAEHCNDKKFKARNVQDLSIELFLYVFIQQCGKFEDRAMVTSVQEHAFDVLSLSVGMV 699
Query: 749 RRIYYDEV 756
+R+Y D++
Sbjct: 700 KRVYCDKL 707
>gi|426198502|gb|EKV48428.1| hypothetical protein AGABI2DRAFT_192038 [Agaricus bisporus var.
bisporus H97]
Length = 1257
Score = 312 bits (799), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 206/652 (31%), Positives = 327/652 (50%), Gaps = 77/652 (11%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ----- 169
G VV+++ER P + G +G L + + + ++ P R I+
Sbjct: 521 AGHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRAEEPRRGPIERPKIV 580
Query: 170 -LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P ++ DA VA I S P ++
Sbjct: 581 WFKPTDKRVPLIAIPTEQAPPDF---VQNSDAYANRLFVAC-IKRHPISSLHPFGTLVEE 636
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTID 288
G G++E + +A+L + FS L C+P VPW +P+ E R+DLR+ I T+D
Sbjct: 637 LGPIGDIEVETSALLKDCNFPTEEFSDNVLKCIPPVPWAIPEHEFKGRQDLRDQRIITLD 696
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P A DLDDALS++ DG VGVHIADVSYFV P TALD +A+ R+TSVY++QR +PM
Sbjct: 697 PEDAKDLDDALSVKINDDGTYDVGVHIADVSYFVKPNTALDRDARKRATSVYLVQRAVPM 756
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP +L E++ SL PG +RL FS+ + + V+ +W G+TVI+S ++SY AQ+++DG
Sbjct: 757 LPPMLCEQLCSLLPGQERLTFSVVYTMTKDAKVLKKWFGKTVIKSAGRISYREAQNVLDG 816
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 468
K + ++ T+ E + D+ R I L+++++ L+ +R +GAL +++ + F
Sbjct: 817 K-PLSTAFTIPE--------HDTQDIRRDIMVLFDLARQLRLERMRNGALIVDSMRLKFQ 867
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 528
D+ G P D + D N L EEFMLL N + A+ +A P+ LLRRH +P R+L
Sbjct: 868 LDDNGLPTDCREYDKYDSNTLVEEFMLLTNLSVAQHVAVHLPEQTLLRRHDSPLERRLIN 927
Query: 529 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF 588
F + G Q+DTSS+ +SL+ + L +L AT Q A YFC+G
Sbjct: 928 FVKRAERLGFQIDTSSASALMKSLDTITDPTARK--LLQLLCYKAT---QRAKYFCAG-M 981
Query: 589 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREG 648
D + HYAL P+YTHFTSP+RRY D++VHR L+A L+ G
Sbjct: 982 LDIAKYQHYALNQPLYTHFTSPIRRYADILVHRQLDAVLQG------------------G 1023
Query: 649 VRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDA 708
V +F D+DA + VA CN + + +
Sbjct: 1024 VDTKFT----MDRDA------------------------VAKVAQQCNIKNDSAALAQGQ 1055
Query: 709 CVKLYMWILLK----KKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
L++ +L+ + ++ +A+V+ + + + + IE+R++ D++
Sbjct: 1056 SAHLFLCVLISDLTYRYGPVIRQAKVINVLEAAFDVLVPEFGIEKRVHVDQM 1107
>gi|392894994|ref|NP_498160.2| Protein F48E8.6 [Caenorhabditis elegans]
gi|353526303|sp|Q09568.2|YR86_CAEEL RecName: Full=Uncharacterized ribonuclease F48E8.6
gi|373254470|emb|CCD71518.1| Protein F48E8.6 [Caenorhabditis elegans]
Length = 848
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 195/599 (32%), Positives = 297/599 (49%), Gaps = 66/599 (11%)
Query: 168 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 227
+ T + P++++ D+ R ++ E L A+I +W ES + ++
Sbjct: 226 VLFVATDSRVPRILIPKSDVDKEFFSRPKD----FERFLYTAKITDWRAESVYADGRLVK 281
Query: 228 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP---WEVPQEELLSRKDLRNFCI 284
+ G GE++ + I+YE+ I FS E L LP W+VP E R+D R+ +
Sbjct: 282 LLGMSGEIDTETERIVYEHQIDHREFSDECLESLPITTAENWKVPDAEFEYRRDFRSDIV 341
Query: 285 FTIDPSTATDLDDALSIERLSDGISR------VGVHIADVSYFVLPGTALDIEAQVRSTS 338
FTIDP TA DLDDAL + + D + +GVHIADV++F+ GT LD A R S
Sbjct: 342 FTIDPKTARDLDDALHAKHIDDCDGKGTPGLEIGVHIADVTFFLKEGTELDKWASERGNS 401
Query: 339 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 398
Y+ Q IPMLP +L E++ SLNPGVDRL+FS + ++ ++ D W GR+VIRS KL+
Sbjct: 402 TYLSQTVIPMLPRILCEQLCSLNPGVDRLSFSTVFKMSYEAELYDVWFGRSVIRSRVKLA 461
Query: 399 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 458
YEHAQD I+ E T E P + ++ L+ ++++L+ KR GAL
Sbjct: 462 YEHAQDFIENP---EKDFTCDE-LPDISDGNTPFEIKEKTLMLHRIAQVLRQKREDSGAL 517
Query: 459 RLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
R+E + F DE P + +D N L EEFMLLAN A+ IA FP+ ALLR H
Sbjct: 518 RIELPRLKFALDEDKKPQGVSIYEIKDSNKLVEEFMLLANMEVAKKIAENFPEHALLRNH 577
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 578
P P + +++ C++ G LD +SG SL + + K + D + ++ + +PMQ
Sbjct: 578 PPPKEKMIKDVAEQCARIGFPLDGRTSGLLSTSLRKYQGKSRLDMCIRQVISSLTIKPMQ 637
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRR 638
A YFC+ + + + H+AL YTHFTSP+RRYPD++VHR L AAL Y +
Sbjct: 638 QAKYFCTFEMP-LSFYHHFALNVDHYTHFTSPIRRYPDVIVHRQLAAALG----YNERSE 692
Query: 639 MLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDR 698
+P+ + + T CND
Sbjct: 693 RVPEE--------------------------------------------IQEICTRCNDT 708
Query: 699 KLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVE 757
KLA + D LY + + + + +A VL + + I + + +R+Y D+++
Sbjct: 709 KLASKEASDESAMLYFGVFIHQTGPMKCQAVVLGVMDLSFDVLIVEYGVVKRVYVDKMK 767
>gi|308497356|ref|XP_003110865.1| hypothetical protein CRE_04763 [Caenorhabditis remanei]
gi|308242745|gb|EFO86697.1| hypothetical protein CRE_04763 [Caenorhabditis remanei]
Length = 871
Score = 309 bits (791), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 188/564 (33%), Positives = 284/564 (50%), Gaps = 68/564 (12%)
Query: 206 LVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP 265
L A+I +W ++S + ++ + G GE++ + I+YE+ I F+ E +S LP
Sbjct: 283 LYTAKIIDWRDDSVYADGQLIKLLGVSGEIDTETERIVYEHQIDHREFTDECISSLPVST 342
Query: 266 ---WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISR------VGVHIA 316
W +P E R+D RN +FTIDP TA DLDDAL + + D + +GVHIA
Sbjct: 343 AEQWTIPDSEFEYRRDFRNDIVFTIDPKTARDLDDALHAKHIDDCDGKGTPGVEIGVHIA 402
Query: 317 DVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN 376
DV++F+ GT LD A R S Y+ Q IPMLP +L E++ SLNPGVDRLAFS + ++
Sbjct: 403 DVTFFLKEGTELDRWASERGNSTYLSQLVIPMLPRILCEQLCSLNPGVDRLAFSTVFKMS 462
Query: 377 SAGDVVDRWIGRTVIRSCCKLSYEHAQDII---DGKFDVESSNTLGEGWPQLYGQFEWSD 433
G++ D W GR++IRS KL+YEHAQD I D +F+ + +G ++
Sbjct: 463 YEGELKDVWFGRSIIRSRVKLAYEHAQDFIENPDKEFEATELPGISDGNTP-------TE 515
Query: 434 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEF 493
+ L+ V++IL+ KR GALR+E K F+ DE P + +D N L EEF
Sbjct: 516 IKEKTLMLHRVAQILRKKREDSGALRIELPKLKFVMDEAKRPQGVSIYEIKDSNKLVEEF 575
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
MLLAN A+ I FPD ALLR HP P + +++ C++ G LD +SG SL
Sbjct: 576 MLLANMEVAKKIESCFPDKALLRNHPPPKEKMIKDVADQCARIGFPLDGKTSGMLSTSLR 635
Query: 554 QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
+ + + + ++ + +PMQ A YFC+ + + + HYAL YTHFTSP+RR
Sbjct: 636 KYQGNSRLFMCIRQVISSLTIKPMQQAKYFCTFEMA-PSFFHHYALNVDHYTHFTSPIRR 694
Query: 614 YPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREAL 673
YPD++VHR L A+L YD+
Sbjct: 695 YPDVIVHRQLAASLG------------------------------YDEKCNRG------- 717
Query: 674 SVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLAL 733
A+ + N+ T CN+ K A + + LY + + + +A VL +
Sbjct: 718 -----------AEEIQNICTRCNETKQASKEASEESAMLYFGVFIHSTGRMTCQAVVLGV 766
Query: 734 GPRFMTIYIEKLAIERRIYYDEVE 757
+ I + + +R+Y D+++
Sbjct: 767 LDSSFDVLIVEYGVVKRVYVDKMK 790
>gi|405121797|gb|AFR96565.1| SSD1 protein [Cryptococcus neoformans var. grubii H99]
Length = 1625
Score = 308 bits (790), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 184/524 (35%), Positives = 288/524 (54%), Gaps = 27/524 (5%)
Query: 115 RPT--GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGS--RKDAKKNRSSLSVPDR--E 166
+PT G VV+++ER P + G +G L + + R++ + +++ P+ +
Sbjct: 949 KPTYAGHVVAVVERMPGQLFSGQLGVLRPSSAATKEKQELERREREGDKARKEEPEARPK 1008
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
+ PT + P + + + P ++ DA +L A I W S P ++
Sbjct: 1009 IVWFKPTDKRVPLIAIPTEQAPADF---IDNPDA-YSNKLFVATIKRWPITSLHPFGTLV 1064
Query: 227 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 286
G G E + +A+L + FS ++ CLP +PW VP+ E R DLR +FT
Sbjct: 1065 EELGAIGNSEVETSALLKDCNFPTEEFSEMTMKCLPPMPWSVPEREYDVRTDLREERVFT 1124
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP + DLDDALS + DG VGVHIADVS+FV T LD EA+ R+TSVY++QR +
Sbjct: 1125 IDPPHSKDLDDALSFKDNKDGTFTVGVHIADVSFFVKTNTQLDREARKRATSVYLVQRVV 1184
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
PM P LLSE++ SL P +RL FS + ++ G+V+ + +T+++SC KL+Y+ A ++
Sbjct: 1185 PMFPPLLSEDLCSLIPDYERLTFSAIFTVDEEGNVLQKKFAKTIVKSCAKLTYDDALTVV 1244
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
G S + G +D+ R IKSL+ ++ ++ +R +GA+ + +SK
Sbjct: 1245 KGGALPRSKTS---------GTHLATDIERDIKSLHSIANKMRARRIENGAMVVSSSKVS 1295
Query: 467 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
F FD G P D + + + + EEFMLL N++AA +IA A P+ ALLRRH AP+ R+L
Sbjct: 1296 FEFDAQGRPVDCRTYQKGEESAIVEEFMLLTNQSAARIIANALPEQALLRRHEAPSERRL 1355
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 586
F A +K G +D +S+G +S + + D + D+L +Q A YFC+G
Sbjct: 1356 ESFVARATKLGFDMDATSAGTLQKSFDNVLD--NDSALCIDLLRKKV---IQRARYFCAG 1410
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
D + H+ L P+YTHFTSP+RRY D++VHR ++A L ++
Sbjct: 1411 -MLDIAKYAHWGLNTPLYTHFTSPIRRYADVLVHRMVDACLTSQ 1453
>gi|62321132|dbj|BAD94251.1| putative 3'-5' exoribonuclease [Arabidopsis thaliana]
Length = 284
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 171/303 (56%), Positives = 212/303 (69%), Gaps = 21/303 (6%)
Query: 577 MQLASYFCSGDFKDDT-DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWK 635
MQLASYFC+G+ KD +WGHYALA P+YTHFTSPLRRYPD+VVHR L AALEAE+LY K
Sbjct: 1 MQLASYFCTGNLKDSVAEWGHYALAVPLYTHFTSPLRRYPDIVVHRALAAALEAEELYSK 60
Query: 636 HRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHC 695
+ + EG R F TGI ++KDAAES+EG+EALSVAALK+GVP +IL +VA +C
Sbjct: 61 QK----QTAIDEG-RSCF-TGIHFNKDAAESIEGKEALSVAALKHGVPSTEILSDVAAYC 114
Query: 696 NDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDE 755
N+RKLA R V+DAC KL+ W +LK+KE+ EARV+ LG RFMT+YI KL IERRIYYD+
Sbjct: 115 NERKLAARKVRDACDKLFTWFVLKQKEIFPCEARVMNLGSRFMTVYISKLGIERRIYYDQ 174
Query: 756 VEGLIVEWLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPNDLKEEHGMFGGSV 815
+EGL +WLE TSTL++ K KRGG G ++ ++E +V P ++ V
Sbjct: 175 IEGLCADWLEATSTLIVD----KLYSKRGGRGFFKPMKEAVYLVSPCEV---------CV 221
Query: 816 NKCFTTDANAKRQCSGSSSNSGVDPGVFPLTIPLLSTIPVALNAIGGGDGPLEIGVRLYM 875
KC + S + V P VFPLTI L STIPV L+A+GG DGPL+IG RLYM
Sbjct: 222 AKCSALSVHDTESPEAVSIDE-VAPAVFPLTIQLFSTIPVVLHAVGGDDGPLDIGARLYM 280
Query: 876 SSY 878
SSY
Sbjct: 281 SSY 283
>gi|321261077|ref|XP_003195258.1| SSD1 protein [Cryptococcus gattii WM276]
gi|317461731|gb|ADV23471.1| SSD1 protein, putative [Cryptococcus gattii WM276]
Length = 1670
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 202/654 (30%), Positives = 328/654 (50%), Gaps = 75/654 (11%)
Query: 115 RPT--GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGS--RKDAKKNRSSLSVPDR--E 166
+PT G VV+++ER P + G +G L + + R++ + +++ P+ +
Sbjct: 949 KPTYAGHVVAVVERMPGQLFSGQLGVLRPSSAATKEKQELERREREGDKARKEEPETRPK 1008
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
+ PT + P + + + P ++ DA +L A I W S P ++
Sbjct: 1009 IVWFKPTDKRVPLIAIPTEQAPADF---IDNPDA-YSNKLFVATIKRWPITSLHPFGTLV 1064
Query: 227 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 286
G G E + +A+L + FS ++ CLP +PW VP+ E R DLR +FT
Sbjct: 1065 EELGTIGNSEVETSALLKDCNFPTEEFSEMTMKCLPPMPWSVPEREYDVRTDLREERVFT 1124
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP A DLDDALS + +G VGVHIADVS+FV T LD EA+ R+TSV+++QR +
Sbjct: 1125 IDPHHAKDLDDALSFKDNKNGTFNVGVHIADVSFFVKANTQLDREARKRATSVFLVQRAV 1184
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
PM P +LSE++ SL P +RL FS + ++ G+V+ + +T+I+SC KL+Y+ A ++
Sbjct: 1185 PMFPPVLSEDLCSLVPDTERLTFSAIFTVDEEGNVLQKKFAKTIIKSCAKLTYDDALTVV 1244
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
+G S + G +D+ I+SL+ ++K ++ +R +GA+ + + K
Sbjct: 1245 NGGALPRSKTS---------GTHLATDIEGDIRSLHSIAKKMRARRIENGAMVVSSLKVS 1295
Query: 467 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
F FD G P D + + + EEFMLL N++ A +IA A P+ ALLRRH P+ R+L
Sbjct: 1296 FEFDAQGRPVDCQTYQKGKASTIVEEFMLLTNQSVARIIANALPEQALLRRHEPPSERRL 1355
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 586
F +K G +D +S+G +S E + D + D+L +Q A YFC+G
Sbjct: 1356 ASFVTRATKLGFDMDPTSAGTLQKSFENVLD--NDSALCIDLLRKKV---IQRARYFCAG 1410
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 646
D + H+ L P+YTHFTSP+RRY D++VHR L+A L + P N
Sbjct: 1411 -MLDIAKYAHWGLNAPLYTHFTSPIRRYADVLVHRMLDACLTS-----------PNPNEV 1458
Query: 647 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 706
+FL D+D + A CN +K + + +
Sbjct: 1459 -----KFL----MDRDQ------------------------VAKAAQQCNMKKQSAKLAE 1485
Query: 707 DACVKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+ V L++ IL+ + ++ EARV + + I + +E+R++ D++
Sbjct: 1486 EQSVHLFLCILINDLTQHYGPVVREARVTNVLETAFDVIIPEFGVEKRVHVDKM 1539
>gi|443927066|gb|ELU45598.1| cell wall biogenesis protein phosphatase Ssd1, putative [Rhizoctonia
solani AG-1 IA]
Length = 1478
Score = 305 bits (781), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 202/654 (30%), Positives = 322/654 (49%), Gaps = 94/654 (14%)
Query: 118 GRVVSIIERSPRR--DGIVGFLNVNQWFNY---------KGGSRKDAKKNRSSLSVPDRE 166
G VV+++ER P + G +G L + + G R D + + + P +
Sbjct: 749 GHVVAVVERMPGQLFSGTLGLLRPSSAATKEKQEAERREREGDRYDEQAAKKEMERP--K 806
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
+ PT + P + + + P E +L A I S P ++
Sbjct: 807 IVWFKPTDKRVPLIAIPTEQAPPDFVTNSE----AYADKLFVACIKRHPISSLHPFGTLV 862
Query: 227 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 286
G G+VE + +A+L + F+ + CLP +PW +P+ E +R+D RN +FT
Sbjct: 863 EELGPIGDVEVETSALLKDCNFPTEEFTENVIKCLPPLPWTIPEREYETRRDFRNERVFT 922
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP+TA D+DDAL ++ DG +GVHI DVSYFV P TALD +A+ R+TSVY++QR +
Sbjct: 923 IDPTTAKDMDDALHVQVNDDGTYDIGVHITDVSYFVKPNTALDRDARKRATSVYLVQRAV 982
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
PMLP LSEE+ SL PG +RL FS + + V+ +W GR++I+S KLSY AQ +I
Sbjct: 983 PMLPPTLSEELCSLVPGKERLTFSAVFTMTQDARVIKKWFGRSIIKSAAKLSYSEAQGVI 1042
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
DG ++ S N + Q + + IK L+ ++K ++++R +G L +++ +
Sbjct: 1043 DGG-NLASKN--------VDPQHSANAIEGDIKILHNLAKQMRERRIENGTLSIQSLRLK 1093
Query: 467 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
F DE G P D + + N L EFM+LAN A+ IA P+ ALLRRH P R+
Sbjct: 1094 FDLDESGAPVDCSDELQTEANHLIAEFMILANTAVAQQIAVHLPEQALLRRHEEPIERR- 1152
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 586
L +DTSS+G +S ++ L +IL + A M A YFC+G
Sbjct: 1153 -----------LVIDTSSAGALQRSFNAVQDPTA--RRLLEILCSKA---MHRAKYFCTG 1196
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 646
D + HYALA P+YTHFTSP+RRY D++VHR L + + P ++ +
Sbjct: 1197 -MLDIAKYSHYALAEPLYTHFTSPIRRYADILVHRQLESVIG------------PASDVK 1243
Query: 647 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 706
D+D+ + VA CN +K + + +
Sbjct: 1244 ----------FTMDRDS------------------------VAKVAQQCNIKKDSAKLAQ 1269
Query: 707 DACVKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+ L++ +L+ ++ ++ +ARV+ + + I + IE+R++ D++
Sbjct: 1270 EQSAHLFLCLLISDLTQRYGPVVRQARVVGVLDAAFDVLIPEFGIEKRVHVDQM 1323
>gi|302852379|ref|XP_002957710.1| hypothetical protein VOLCADRAFT_107778 [Volvox carteri f.
nagariensis]
gi|300257004|gb|EFJ41259.1| hypothetical protein VOLCADRAFT_107778 [Volvox carteri f.
nagariensis]
Length = 1177
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 218/714 (30%), Positives = 328/714 (45%), Gaps = 152/714 (21%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFL---------NVNQWFNYKGGSRKDAKKNRSSLSVPDR 165
R T +VV++++ SP+R +VG L ++ W + G+ N + +
Sbjct: 370 RATAKVVAVLDPSPKRSQLVGLLRLVGRLPDTSLPSWDPSRDGAAMPGPLNAAVEAARAA 429
Query: 166 EY-IQLTPTHPKYPKMVV---LVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFP 221
+ L P P+ P V V +L ++ L G+ T LV+A + W S P
Sbjct: 430 ALQLHLVPLDPRLPTCRVEADKVYNLSPALLVGLLRGEQTASRTLVSALLLSWPPASQQP 489
Query: 222 QAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 281
A + G+ GE+E + AIL I + F P+ L+CLP +PW + + +L R+D R+
Sbjct: 490 LAGLRSSLGQAGEIESETAAILEGQGIRATDFEPQVLACLPPLPWRIGERDLAGRRDFRS 549
Query: 282 FCIFTIDPSTATDLDDALSIERLSDG--------ISRVGVHIADVSYFVLPGTALDIEAQ 333
+F+IDP TA DLDDALSIE L+ G RVGVHIADVS+F+ P +ALD+EA
Sbjct: 550 QRVFSIDPPTAKDLDDALSIEPLTGGGPEAAEGAAWRVGVHIADVSHFIEPFSALDVEAG 609
Query: 334 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 393
+RSTS Y++QR +PMLP LL E++ LNPG DRL S+ W
Sbjct: 610 LRSTSTYLVQRVVPMLPPLLCEQLCPLNPGEDRLTCSVVW-------------------- 649
Query: 394 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE--VSKILKDK 451
D++ + W +G+ V+RS L V K+++ +
Sbjct: 650 -----------------DMDKHGNILSTW---FGR----SVIRSCAKLTYPLVQKMIEGE 685
Query: 452 RFTDGALRLENSKPVFLFDEYGTP-YDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFP 510
F ++ G P + +S ++ N L EEFM+LAN + A+ I++ FP
Sbjct: 686 ---------------FHAEDTGVPLHGEGVSWEQEANQLVEEFMVLANISVAKFISQVFP 730
Query: 511 DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVL----- 565
D A+LRRHP PN K++E G++L+ SS+ +L R
Sbjct: 731 DRAMLRRHPPPNDTKMQELREAAEAAGVELNVSSAAALQTTLNALRASAPPPPPPAGEGE 790
Query: 566 -----------------------FDILINYATRPMQLASYFCSGDFKDDT-DWGHYALAF 601
++L+ ATRPMQLA YF +G + W HYALA
Sbjct: 791 GEGEGGREGGAGLLSAAARHRRKVELLVMLATRPMQLAKYFSTGSLDEAQWLWRHYALAI 850
Query: 602 PVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDK 661
YTHFTSP+RRYPD+VVHR L AAL+
Sbjct: 851 DHYTHFTSPIRRYPDVVVHRQLAAALDVT------------------------------- 879
Query: 662 DAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKK 721
+G ++ AA K+ + + VA HCN+R+LA R+ +DA ++LY+ +LL ++
Sbjct: 880 ------QGGLSVEEAARKHRLLDPALTDRVAEHCNERRLAARDAQDASLRLYLCVLLARQ 933
Query: 722 -EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVE-GLIVEWLETTSTLVLS 773
++L L G F + Y+ + E + + L EW + L L+
Sbjct: 934 PRIVLGTVNGLG-GNLFFSAYLSEFGTEVTVVLGKTGVPLTAEWNQGAKVLTLT 986
>gi|449509928|ref|XP_004176842.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like exonuclease 2
[Taeniopygia guttata]
Length = 816
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 200/584 (34%), Positives = 283/584 (48%), Gaps = 106/584 (18%)
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
+P + P++ V + D P + E A +M L RI +W E+S F +
Sbjct: 270 FSPVDHRVPRVYVPLADCPPDFVAKPE---AYSQM-LFICRIVDWKEDSNFASGQLCKSL 325
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VPWEVPQEELLSRKDLRNFCIFTID 288
G+ GE+EP+ IL E + S FSPE L CLP +PW + EL R+DLR CIFTID
Sbjct: 326 GQAGEIEPESEGILTEYGVDFSDFSPEVLECLPQNLPWVISPGELAKRRDLRKECIFTID 385
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
PSTA DLDDALS ++L DG VGVHIADVSYFVL TALD A R+TSVY++Q+ IPM
Sbjct: 386 PSTARDLDDALSCKQLPDGNLEVGVHIADVSYFVLEDTALDKVASERATSVYLVQKVIPM 445
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP LL EE+ SLNP DRL FS+ W L G +++ W G+TVI SC KLSY+HAQ +ID
Sbjct: 446 LPRLLCEELCSLNPMQDRLTFSVIWKLTPEGKILEEWFGQTVICSCVKLSYDHAQSMIDS 505
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 468
V S L P + + +++ ++ SL+ V A RL +
Sbjct: 506 PGKVLSPEEL----PPVSPEHSIAEIQEAVLSLHRV------------AQRLRKQR---- 545
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 528
F E D + L+F ++ P + ++ N +
Sbjct: 546 FTEGALHLDQM-----KLSFTLDQ-------------ESGMPQGCYIYQYRDSNSTR--- 584
Query: 529 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF 588
+ S G +SL + K ++L +RPMQ+A YFC+G
Sbjct: 585 ------------EVSLIGAVSKSLNETFGADKYSRTRKEVLTYMFSRPMQMALYFCTGVL 632
Query: 589 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREG 648
D+T + HYAL P YTHFTSP+RRY D+VVHR L+A+L A P +E
Sbjct: 633 HDETLFHHYALNVPFYTHFTSPIRRYADIVVHRLLSASLGARS---------PIRMEKEA 683
Query: 649 VRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDA 708
++ + A HCNDRK+A + V++
Sbjct: 684 IQKQ---------------------------------------ADHCNDRKMASKRVQEL 704
Query: 709 CVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
L+ + +++ L SEA V+ + + + + K +++RIY
Sbjct: 705 SADLFFSVFVRECGPLESEAMVMGVLSKAFDVLVLKFGVQKRIY 748
>gi|426233851|ref|XP_004010923.1| PREDICTED: DIS3-like exonuclease 1 [Ovis aries]
Length = 1111
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 210/657 (31%), Positives = 328/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F ++ + +G K+A+K I +TP
Sbjct: 388 PTGRVVGILQKN-WRDYVVTFPSIEE-VQSQG---KNAQK------------ILVTPWDY 430
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 431 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSMYPNGHFVRVLGRIGDL 478
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN I FS + +P PW+V +E RKDLR +F+IDPS
Sbjct: 479 EGEIATILVENNISVVPFSEAQMCEMPVNTPENPWKVNSQEERERKDLRKTHLVFSIDPS 538
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L +G +GVHIADV+YFV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 539 GCEDVDDTLSVRALDNGNLELGVHIADVTYFVAPHSYVDIEARTRATTYYLADRRYDMLP 598
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS +V SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQD++DG
Sbjct: 599 AILSADVCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQDLLDGN 658
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F V + + Q + ++V +I+ L ++++ ++ KR GAL LE +
Sbjct: 659 FSVVKDIPEFKDLDEKSRQAKLEELVWAIRKLTDIARHIRAKRDRCGALELEGVEVRIQL 718
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE +D + +++ E M+LAN A+ I +FP ALLRRHP P+ E
Sbjct: 719 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRRHPPPHQEFFSEL 778
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 779 RECAKAKGFFIDTRSNKALADSLDNAND--PNDPIVNKLLRSMATQAMSNALYFSTGSCA 836
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K +M K N
Sbjct: 837 EE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISEDK------KMEIKEN----- 884
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 885 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 912
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL+V
Sbjct: 913 TELFQCMYFKDKDPETEERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLRNKDGLVV 969
>gi|299115727|emb|CBN74292.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 998
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 201/584 (34%), Positives = 288/584 (49%), Gaps = 53/584 (9%)
Query: 45 LLSEKGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERL 104
LL E + D+S A +E G I + P+ + V + IE+
Sbjct: 301 LLPEAEWYSQGDTSGGATKEEKTPTGGEMEIPDNRPTEN----LVPDPTAQPAIEEIEK- 355
Query: 105 SAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD 164
+ + T++P GRVV II R+ R G L V G R A S S
Sbjct: 356 TKTLEGAGTRQPCGRVVGIIRRNWREKQYCGSLRVE-------GDRAVASGKGQSTSA-- 406
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
P K P + + + KR+ LVA +D W +P H
Sbjct: 407 ----LFMPVDRKIPWVRIQTRQRDVLSTKRI----------LVA--MDSWPAWCKYPLGH 450
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCI 284
+ G G + IL E+ I FS + L+CLP W + E RKDLR+ +
Sbjct: 451 YVKTLGEKGAKATETEVILLEHEIPHESFSGKVLACLPPEDWAITPENSEGRKDLRHLPV 510
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL L +G VGVHIADV++FV G+ALD EA RSTS Y+++R
Sbjct: 511 LSIDPPGCKDIDDALHARPLENGNLEVGVHIADVTHFVEAGSALDQEASSRSTSTYLVER 570
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
++ MLP +L+E + SL P VDR AFS+ W++ AG +VD +++I S L+Y AQ
Sbjct: 571 RLDMLPGMLTETLCSLKPNVDRFAFSVIWEMTPAGVIVDVDFCKSIIHSVAGLTYNEAQL 630
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
++D D + E S++ L +++KI + +R GAL L + +
Sbjct: 631 MLD---DPNIQDVKAE----------------SVRRLNDLAKIFRKRRMDSGALTLASPE 671
Query: 465 PVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
F+ D E P D + ++ N L EEFMLLAN T + I R FP ++LRRHP+P+
Sbjct: 672 VRFVLDSESQNPTDVQMYALKETNALVEEFMLLANITVGKKILRHFPTLSVLRRHPSPSR 731
Query: 524 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 583
++ A G++LD +S + QSL++A + D +L +TR M A YF
Sbjct: 732 QQFDGLLAIAQAVGIKLDVDNSKKLAQSLDRATR--EGDPYFNKLLRILSTRCMMPAQYF 789
Query: 584 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
CSG+ + DW HY LA P+YTHFTSP+RRY D+ VHR L AA+
Sbjct: 790 CSGE-QSQEDWHHYGLAAPIYTHFTSPIRRYADVCVHRLLGAAI 832
>gi|58269608|ref|XP_571960.1| SSD1 protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57228196|gb|AAW44653.1| SSD1 protein, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1671
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 200/654 (30%), Positives = 325/654 (49%), Gaps = 75/654 (11%)
Query: 115 RPT--GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE---- 166
+PT G VV+++ER P + G +G L + + + ++ + E
Sbjct: 950 KPTYAGHVVAVVERMPGQLFSGQLGVLRPSSAATKEKQELERREREGEKARKEEPETRPK 1009
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
+ PT + P + + + P ++ DA +L A I W S P ++
Sbjct: 1010 IVWFKPTDKRVPLIAIPTEQAPADF---IDNPDA-YSNKLFVATIKRWPITSLHPFGTLV 1065
Query: 227 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 286
G G E + +A+L + FS ++ CLP +PW VP+ E R DLR +FT
Sbjct: 1066 EELGAIGNSEVETSALLKDCNFPTEEFSEMTMKCLPPMPWSVPEREYDVRTDLREERVFT 1125
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP + DLDDALS + DG VGVHIADVS+FV LD EA+ R+TSVY++QR +
Sbjct: 1126 IDPPHSKDLDDALSFKDNKDGTFTVGVHIADVSFFVKANAQLDREARKRATSVYLVQRAV 1185
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
PM P LLSE++ SL P +RL FS + ++ G+V+ + +T+++SC KL+Y+ A ++
Sbjct: 1186 PMFPPLLSEDLCSLVPDYERLTFSAIFTVDEEGNVLQKKFAKTIVKSCAKLTYDDALTVV 1245
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
G S + +++ +D+ I+SL+ ++ ++ +R +GA+ + +SK
Sbjct: 1246 KGGALPRSKTS------RIH---LATDIEGDIRSLHSIASKMRARRIENGAMVVSSSKVS 1296
Query: 467 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
F FD G P D + + + EEFMLL N++ A +IA A P+ ALLRRH P+ R+L
Sbjct: 1297 FEFDAQGRPVDCQTYQNGEASVIVEEFMLLTNQSVARIIANALPEQALLRRHEPPSERRL 1356
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 586
F A +K G +D +S+G +S ++ + D + D+L +Q A YFC+G
Sbjct: 1357 ESFVARATKLGFDMDPTSAGTLQKSFDKVLD--NDSALCIDLLRKKV---IQRARYFCAG 1411
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 646
D + H+ L P+YTHFTSP+RRY D++VHR L+A L + P N
Sbjct: 1412 -MLDIAKFAHWGLNTPLYTHFTSPIRRYADVLVHRMLDACLTS-----------PNPNEV 1459
Query: 647 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 706
+FL D+D + A CN +K + + +
Sbjct: 1460 -----KFL----MDRDQ------------------------VAKAAQQCNMKKQSAKLAE 1486
Query: 707 DACVKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+ V L++ IL+ + ++ EARV + + I + +E+R++ D++
Sbjct: 1487 EQSVHLFLCILINDLTEHYGPVVREARVTNVLETAFDVIIPEFGVEKRVHVDKM 1540
>gi|296483673|tpg|DAA25788.1| TPA: DIS3-like exonuclease 1 [Bos taurus]
Length = 970
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 207/657 (31%), Positives = 330/657 (50%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F ++ + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSIEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 290 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSMYPNGHFVRVLGRIGDL 337
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +E R+DLR +F+IDPS
Sbjct: 338 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSSQEEREREDLRKTHLVFSIDPS 397
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L +G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSVRALDNGNLELGVHIADVTHFVAPHSYIDIEARTRATTYYLADRRYDMLP 457
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS +V SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQD++DG
Sbjct: 458 AILSADVCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQDLLDGN 517
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F V + + Q + ++V +I+ L ++++ ++ KR + GAL LE +
Sbjct: 518 FSVVKDIPEFKDLDEKSRQAKLEELVWAIRKLTDIARHIRAKRDSCGALELEGVEVRIQL 577
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE +D + +++ E M+LAN A+ I +FP ALLRRHP P+ E
Sbjct: 578 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRRHPPPHQEFFSEL 637
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKALADSLDNAND--PNDPIVNKLLRSMATQAMSNALYFSTGSCA 695
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K +M + N
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDK------KMEIQEN----- 743
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 744 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 771
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL+V
Sbjct: 772 TELFQCMYFKDKDPETEERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLRNKDGLVV 828
>gi|134114027|ref|XP_774261.1| hypothetical protein CNBG2420 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256896|gb|EAL19614.1| hypothetical protein CNBG2420 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1657
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 198/654 (30%), Positives = 323/654 (49%), Gaps = 75/654 (11%)
Query: 115 RPT--GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE---- 166
+PT G VV+++ER P + G +G L + + + ++ + E
Sbjct: 936 KPTYAGHVVAVVERMPGQLFSGQLGVLRPSSAATKEKQELERREREGEKARKEEPETRPK 995
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
+ PT + P + + + P ++ DA +L A I W S P ++
Sbjct: 996 IVWFKPTDKRVPLIAIPTEQAPADF---IDNPDA-YSNKLFVATIKRWPITSLHPFGTLV 1051
Query: 227 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 286
G G E + +A+L + FS ++ CLP +PW VP+ E R DLR +FT
Sbjct: 1052 EELGAIGNSEVETSALLKDCNFPTEEFSEMTMKCLPPMPWSVPEREYDVRTDLREERVFT 1111
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP + DLDDALS + DG VGVHIADVS+FV LD EA+ R+TSVY++QR +
Sbjct: 1112 IDPPHSKDLDDALSFKDNKDGTFTVGVHIADVSFFVKANAQLDREARKRATSVYLVQRAV 1171
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
PM P LLSE++ SL P +RL FS + ++ G+V+ + +T+++SC KL+Y+ A ++
Sbjct: 1172 PMFPPLLSEDLCSLVPDYERLTFSAIFTVDEEGNVLQKKFAKTIVKSCAKLTYDDALTVV 1231
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
G S + +++ +D+ I+SL+ ++ ++ +R +GA+ + +SK
Sbjct: 1232 KGGALPRSKTS------RIH---LATDIEGDIRSLHSIASKMRARRIENGAMVVSSSKVS 1282
Query: 467 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
F FD G P D + + + EEFMLL N++ A +IA A P+ ALLRRH P+ R+L
Sbjct: 1283 FEFDAQGRPVDCQTYQNGEASVIVEEFMLLTNQSVARIIANALPEQALLRRHEPPSERRL 1342
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 586
F A +K G +D +S+G +S ++ + D + D+L +Q A YFC+G
Sbjct: 1343 ESFVARATKLGFDMDPTSAGTLQKSFDKVLD--NDSALCIDLLRKKV---IQRARYFCAG 1397
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 646
D + H+ L P+YTHFTSP+RRY D++VHR L+A L + P N
Sbjct: 1398 -MLDIAKFAHWGLNTPLYTHFTSPIRRYADVLVHRMLDACLTS-----------PNPNEV 1445
Query: 647 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 706
+ + R D + A CN +K + + +
Sbjct: 1446 KFLMDR---------------------------------DQVAKAAQQCNMKKQSAKLAE 1472
Query: 707 DACVKLYMWILL----KKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+ V L++ IL+ + ++ EARV + + I + +E+R++ D++
Sbjct: 1473 EQSVHLFLCILINDLTEHYGPVVREARVTNVLETAFDVIIPEFGVEKRVHVDKM 1526
>gi|440908050|gb|ELR58117.1| DIS3-like exonuclease 1, partial [Bos grunniens mutus]
Length = 1008
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 207/657 (31%), Positives = 330/657 (50%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F ++ + +G K+A+K I +TP
Sbjct: 285 PTGRVVGILQKN-WRDYVVTFPSIEE-VQSQG---KNAQK------------ILVTPWDY 327
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 328 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSMYPNGHFVRVLGRIGDL 375
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +E R+DLR +F+IDPS
Sbjct: 376 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSSQEEREREDLRKTHLVFSIDPS 435
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDALS+ L +G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 436 GCEDVDDALSVRALDNGNLELGVHIADVTHFVAPHSYIDIEARTRATTYYLADRRYDMLP 495
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS +V SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQD++DG
Sbjct: 496 AILSADVCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQDLLDGN 555
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F V + + Q + ++V +I+ L ++++ ++ KR + GAL LE +
Sbjct: 556 FSVVKDIPEFKDLDEKSRQAKLEELVWAIRKLTDIARHIRAKRDSCGALELEGVEVRIQL 615
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE +D + +++ E M+LAN A+ I +FP ALLRRHP P+ E
Sbjct: 616 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRRHPPPHQEFFSEL 675
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 676 RECAKAKGFFIDTRSNKALADSLDNAND--PNDPIVNKLLRSMATQAMSNALYFSTGSCA 733
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ K +M + N
Sbjct: 734 EE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAIS------KDNKMEIQEN----- 781
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 782 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 809
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + +++ + I+ Y +GL+V
Sbjct: 810 TELFQCMYFKDKDPETEERCISDGVIYSIRTNGVLVFVPRFGIKGAAYLRNKDGLVV 866
>gi|118151430|ref|NP_001071624.1| DIS3-like exonuclease 1 [Bos taurus]
gi|117306266|gb|AAI26556.1| DIS3 mitotic control homolog (S. cerevisiae)-like [Bos taurus]
Length = 970
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 207/657 (31%), Positives = 330/657 (50%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F ++ + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSIEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 290 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSMYPNGHFVRVLGRIGDL 337
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +E R+DLR +F+IDPS
Sbjct: 338 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSSQEEREREDLRKTHLVFSIDPS 397
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L +G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSVRALDNGNLELGVHIADVTHFVAPHSYIDIEARTRATTYYLADRRYDMLP 457
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS +V SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQD++DG
Sbjct: 458 AILSADVCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQDLLDGN 517
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F V + + Q + ++V +I+ L ++++ ++ KR + GAL LE +
Sbjct: 518 FSVVKDIPEFKDLDEKSRQAKLEELVWAIRKLTDIARHIRAKRDSCGALELEGVEVRIQL 577
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE +D + +++ E M+LAN A+ I +FP ALLRRHP P+ E
Sbjct: 578 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRRHPPPHQEFFSEL 637
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKALADSLDNAND--PNDPIVNKLLRSMATQAMSNALYFSTGSCA 695
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K +M + N
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDK------KMEIQEN----- 743
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 744 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 771
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL+V
Sbjct: 772 TELFQCMYFKDKDPETEERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLRNKDGLVV 828
>gi|403365627|gb|EJY82601.1| RNB-like protein [Oxytricha trifallax]
Length = 1463
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 229/725 (31%), Positives = 340/725 (46%), Gaps = 98/725 (13%)
Query: 115 RPTGRVVSIIERSPR-RDGIVGFLNVNQWFNYKGG------SRKDAKKNRSSLSVPDREY 167
RP G + +II R ++ +V + V + S D KKN S
Sbjct: 719 RPMGIIKAIISSPSREKEHLVTLIKVESSMEFDEKALQNLISLHDQKKNAVSTG------ 772
Query: 168 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 227
I P K P M + ++P + + ++ I ++ W + P +V+
Sbjct: 773 IFAVPVSKKLPWMALF--NIPIELIQDIK-SKKKINQRYYIVKMMPWKAHATRPACNVIS 829
Query: 228 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV----------------PWEVPQE 271
G G ++ + +L + I + E V W +PQE
Sbjct: 830 SIGEAGNLDAESMRLLKMHEIWSDEYETEGQKINEKVHESLRIFTKDIDEKSGEWIIPQE 889
Query: 272 ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 331
E+ R DLRN IFTIDP TA DLDDALSI+++SD I +GVHIADVSYFV GT LD E
Sbjct: 890 EIARRVDLRNKRIFTIDPITAKDLDDALSIDKISDFIYEIGVHIADVSYFVQQGTELDKE 949
Query: 332 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW----IG 387
AQ+R TSVY + + PMLP LL E + SLNP VDRLA+SIF+ ++ +D+ I
Sbjct: 950 AQLRCTSVYFVHKVYPMLPRLLCERLCSLNPKVDRLAYSIFFRMDIRTGELDKTYTPRIQ 1009
Query: 388 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 447
RTVI++C K Y+ QDI+DGK ES L E + + G ++S++ + E+++
Sbjct: 1010 RTVIKTCAKWHYQLVQDILDGKISQESQ--LDEQYKPING-VKFSEMRDDCFLMNEIAQK 1066
Query: 448 LKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
+ KR G++ L N + F D E P+D S R + FL EE+MLLAN AE +
Sbjct: 1067 RRKKRLEHGSILLSNREFCFALDPETKMPFDFSESYRIESKFLVEEYMLLANILIAEHLH 1126
Query: 507 RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ-LDTSSSGQFHQSLEQAREKLKDDYVL 565
+ D LLR HP K + + F K GL+ +D + S SLE RE D
Sbjct: 1127 QYCKDKTLLRAHPDVEDEKKLKLKVFFEKVGLESIDLTDSQTLSVSLENLRE--TGDSAK 1184
Query: 566 FDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 625
F++ + +Q A Y C D + D ++ H+ L FP+YTHFTSP+RRY DL+VHR +
Sbjct: 1185 FNVAMRKFLTCLQCAKYMCINDAQ-DREYMHFGLNFPLYTHFTSPIRRYADLLVHRLVTL 1243
Query: 626 ALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCA 685
L+ H+EG R +A + Y
Sbjct: 1244 TLQ----------------HKEGTRD----------------------LIAQMDYS---- 1261
Query: 686 DILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKL 745
N A C+++ + AC +L+ +LLK K V + E + + ++IYI+++
Sbjct: 1262 ----NYADMCSEKSYNAKRASQACSRLFHCLLLKTKGVSVFETLLFDMDNGSISIYIDEV 1317
Query: 746 AIERRIYYDE---VEGLIVEWLETTSTLVLSL---CAHKRSFKRGGPGNYRALEEVALVV 799
+ ++I + +E L+ + E T+V L A K K+GG N L++
Sbjct: 1318 NMHQKIRLRDDSRIESLV--FFEEHLTIVAKLKPTKAQKEENKKGGLKNEDKLDKFKKAK 1375
Query: 800 RPNDL 804
DL
Sbjct: 1376 SIQDL 1380
>gi|166201910|sp|A0JN80.2|DI3L1_BOVIN RecName: Full=DIS3-like exonuclease 1
Length = 1053
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 207/657 (31%), Positives = 330/657 (50%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F ++ + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSIEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSMYPNGHFVRVLGRIGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +E R+DLR +F+IDPS
Sbjct: 421 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSSQEEREREDLRKTHLVFSIDPS 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L +G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRALDNGNLELGVHIADVTHFVAPHSYIDIEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS +V SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQD++DG
Sbjct: 541 AILSADVCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQDLLDGN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F V + + Q + ++V +I+ L ++++ ++ KR + GAL LE +
Sbjct: 601 FSVVKDIPEFKDLDEKSRQAKLEELVWAIRKLTDIARHIRAKRDSCGALELEGVEVRIQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE +D + +++ E M+LAN A+ I +FP ALLRRHP P+ E
Sbjct: 661 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRRHPPPHQEFFSEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKALADSLDNAND--PNDPIVNKLLRSMATQAMSNALYFSTGSCA 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K +M + N
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDK------KMEIQEN----- 826
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 827 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 854
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL+V
Sbjct: 855 TELFQCMYFKDKDPETEERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLRNKDGLVV 911
>gi|313237070|emb|CBY12292.1| unnamed protein product [Oikopleura dioica]
Length = 907
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 204/643 (31%), Positives = 306/643 (47%), Gaps = 110/643 (17%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTG +V II+R+ W NY G + +
Sbjct: 312 PTGEIVGIIKRA--------------WRNYCG-------------VIEGSTRVLFLAAQR 344
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + + I +RL +VA ID W+ +S +P H++ V G G+
Sbjct: 345 QIPKIRIETRQVDRLIGQRL----------VVA--IDGWSRKSRYPNGHLVKVLGNVGDK 392
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
+ + +L E+ + FSP+ LSCLP W + +EE+ R DLR + I ++DP TD+
Sbjct: 393 KTENEVLLLEHDVKHDAFSPKVLSCLPDKNWTITEEEMAKRVDLREYDIASVDPPGCTDI 452
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDAL ++L +G VGVHIADVS+F+ PGTALD EA R TSVY+ +I M+P+LLS
Sbjct: 453 DDALHCKKLPNGNYEVGVHIADVSHFIKPGTALDEEAAQRGTSVYLADNRIDMVPILLSS 512
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+ SL G +RLAFS W+L+ +V ++VI+S +YE AQ ID K +S
Sbjct: 513 NLCSLRGGEERLAFSTIWELDDNAKIVSVKFHKSVIKSKSAFTYEEAQIRIDDKSKTDS- 571
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
+ S++ L ++K LK +R DGAL L + + F D E
Sbjct: 572 ------------------LTESLRGLNYLAKKLKAQRLEDGALTLASVEVRFHLDSETAD 613
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P D ++ N + EEFMLLAN + AE I FP SA+LRRHP P +
Sbjct: 614 PIDLYTKELKETNSMVEEFMLLANCSVAEHIRTEFPQSAVLRRHPKPPVSNFDPLVRAAQ 673
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
G L+ +SS + SL A + D ++ +L +TR M A YFC+G F+ D W
Sbjct: 674 AKGFHLNVNSSRELADSLNLAVD--PSDPMVNTVLRVMSTRSMMQAVYFCTG-FESDC-W 729
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HY LA P+YTHFTSP+RRY D++VHR L A++ A+ +L KN+
Sbjct: 730 -HYGLAAPIYTHFTSPIRRYADIMVHRALAASIGADTTTPD---ILDKNH---------- 775
Query: 655 TGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYM 714
+ NV + N R + + A + L+
Sbjct: 776 ---------------------------------INNVCKNINFRNRMAQQAQRASIALHT 802
Query: 715 WILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVE 757
+ +K+ + EA V+ + + + I + +E I+ +E+E
Sbjct: 803 QLYFRKQGARMEEAYVMQVKQNAIGVLIPQFGMEGTIFLNEIE 845
>gi|148668131|gb|EDL00461.1| RIKEN cDNA 2810028N01, isoform CRA_b [Mus musculus]
Length = 781
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 189/523 (36%), Positives = 269/523 (51%), Gaps = 65/523 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
RPTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 163 RPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 199
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 200 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 246
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + +E++ +R+DLR+ C+ ++DP
Sbjct: 247 GEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWSITEEDMKNREDLRHLCVCSVDPPGC 306
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL LS+G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 307 TDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 366
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 367 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 421
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S + + D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 422 --SAAMND------------DITTSLRGLNQLAKILKKGRIEKGALTLSSPEIRFHMDSE 467
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 468 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYDILVK 527
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
LQ+ T ++ SL++A D+ + L+ ATR M A YFCSG
Sbjct: 528 AAKSKNLQIKTDTAKSLADSLDRAESP---DFPYLNTLLRILATRCMMQAVYFCSG---M 581
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 582 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 624
>gi|148668130|gb|EDL00460.1| RIKEN cDNA 2810028N01, isoform CRA_a [Mus musculus]
Length = 946
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 189/523 (36%), Positives = 269/523 (51%), Gaps = 65/523 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
RPTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 328 RPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 364
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 365 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 411
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + +E++ +R+DLR+ C+ ++DP
Sbjct: 412 GEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWSITEEDMKNREDLRHLCVCSVDPPGC 471
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL LS+G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 472 TDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 531
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 532 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 586
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S + + D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 587 --SAAMND------------DITTSLRGLNQLAKILKKGRIEKGALTLSSPEIRFHMDSE 632
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 633 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYDILVK 692
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
LQ+ T ++ SL++A D+ + L+ ATR M A YFCSG
Sbjct: 693 AAKSKNLQIKTDTAKSLADSLDRAESP---DFPYLNTLLRILATRCMMQAVYFCSG---M 746
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 747 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 789
>gi|145207992|ref|NP_082591.2| exosome complex exonuclease RRP44 [Mus musculus]
gi|166231533|sp|Q9CSH3.4|RRP44_MOUSE RecName: Full=Exosome complex exonuclease RRP44; AltName:
Full=Protein DIS3 homolog; AltName: Full=Ribosomal
RNA-processing protein 44
Length = 958
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 189/523 (36%), Positives = 269/523 (51%), Gaps = 65/523 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
RPTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 RPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + +E++ +R+DLR+ C+ ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWSITEEDMKNREDLRHLCVCSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL LS+G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S + + D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 599 --SAAMND------------DITTSLRGLNQLAKILKKGRIEKGALTLSSPEIRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYDILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
LQ+ T ++ SL++A D+ + L+ ATR M A YFCSG
Sbjct: 705 AAKSKNLQIKTDTAKSLADSLDRAESP---DFPYLNTLLRILATRCMMQAVYFCSG---M 758
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 759 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|302814738|ref|XP_002989052.1| hypothetical protein SELMODRAFT_129119 [Selaginella moellendorffii]
gi|300143153|gb|EFJ09846.1| hypothetical protein SELMODRAFT_129119 [Selaginella moellendorffii]
Length = 940
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 209/626 (33%), Positives = 308/626 (49%), Gaps = 80/626 (12%)
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 172
+ RP GRV+ II+R+ W Y GS + + SV + ++
Sbjct: 339 SSRPNGRVIGIIKRN--------------WRAY-CGSLEPMTTPAGAGSVANALFVS--- 380
Query: 173 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ PK+ + + + + KR + +D W+ S +P H + G+
Sbjct: 381 ADRRIPKIRIQTRQFGNLVDKR------------IVVSVDSWDLNSRYPSGHYVKTVGKI 428
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPS 290
G+ + + +L EN I FS + L+CLP +PW VP E L R+DLRN +F++DP
Sbjct: 429 GDRDTESEVLLIENDINNRPFSDQVLACLPPLPWSVPAEALHDPHREDLRNLRVFSVDPI 488
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDAL L G +VGVHIADV+ FV PGT LDIEAQ R TSVY+++R+I MLP
Sbjct: 489 GCKDIDDALHCTLLPTGNYQVGVHIADVTSFVHPGTPLDIEAQERGTSVYLVERRIDMLP 548
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 410
L+E+V SL V+R FS+ W+++S D++ + VI+S LSY AQ +D
Sbjct: 549 KPLTEDVCSLRADVERFVFSVIWEMSSEADIISVRFTKGVIKSSAALSYVEAQARMD--- 605
Query: 411 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 470
D S+ L ++++ ++K+L+ +R GAL L + + F D
Sbjct: 606 DSRMSDPL----------------TTDLRNMNRLAKVLRQRRIERGALTLASPEVKFEID 649
Query: 471 -EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
E P D + + N + EEFMLLAN + A+ I +FP +LLRRHP P +
Sbjct: 650 TETHNPLDVGMYQVRESNHMVEEFMLLANISVAKKILSSFPVFSLLRRHPTPTSKMFEPL 709
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
S G++LD +SS +L+ A + DD ++ ATR M A YFCSG+
Sbjct: 710 LKIASAVGIKLDITSSMTLANTLDLA---VGDDPYFNKLIRILATRCMTQAVYFCSGELS 766
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR------RMLPKN 643
++ HY LA +YTHFTSP+RRY D++VHR L AAL+ EKL R ++
Sbjct: 767 -PPEFQHYGLASAIYTHFTSPIRRYADVIVHRLLAAALDLEKLSPSLRDKSEVTKIADNL 825
Query: 644 NHRE---GVRGR----FLTGIFY------DKDAAESLEGREALSVAALKYGVPCADILVN 690
N+R + GR T +F+ D DA L V KYG+ LV+
Sbjct: 826 NYRHRNAQMAGRASVELHTLMFFRNSRPTDADARIVQIRSNGLIVFVPKYGIEGPVFLVD 885
Query: 691 VATHCN-----DRKLACRNVKDACVK 711
A+ + D + C N +D K
Sbjct: 886 KASKSSTNWIMDEEQQCANARDGSSK 911
>gi|170061188|ref|XP_001866127.1| exosome complex exonuclease RRP44 [Culex quinquefasciatus]
gi|167879528|gb|EDS42911.1| exosome complex exonuclease RRP44 [Culex quinquefasciatus]
Length = 1163
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 173/464 (37%), Positives = 253/464 (54%), Gaps = 11/464 (2%)
Query: 166 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 225
+YI+ +P K P M + + P++I K +E + A I EW+E+ P +
Sbjct: 557 QYIKFSPRDLKIPVMRIYKQHWPEAIFKN---DFKQLESVIYQAEIIEWHEDVPI--GTI 611
Query: 226 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 285
L G+ GE+E + A+L E + S +S E ++ LP P+++P+EEL R+DLR C+F
Sbjct: 612 LKSIGKCGELEAENQALLVEYDLDVSPYSEEIINSLPPSPFQIPEEELKKREDLREECVF 671
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
TIDP TA DLDDALS + L +G +GVHI+DVSYF+ G+ LD ++R+TS+YM+
Sbjct: 672 TIDPLTARDLDDALSCKVLKNGNFEIGVHISDVSYFLKEGSELDELVKLRATSIYMVDNV 731
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 405
MLP L + SL PG D+LAFS+FW++ V+ +TVI SC +L+YEHAQ +
Sbjct: 732 YHMLPKPLC-FLCSLLPGEDKLAFSVFWEITPDAKVLSTRFAKTVINSCTQLAYEHAQVM 790
Query: 406 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
+D + N + +P + + + + R + L ++ L+ +R +G +++ K
Sbjct: 791 LDKP----TENLRTDDFPPILHDYTPNYLSRIVNQLQSIAVQLRARRMENGCIKINQPKL 846
Query: 466 VFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 524
F D G P + N + E+FMLLAN + AE F D A+LR H AP+
Sbjct: 847 SFTLDPNTGKPTSYAVYELRTANQMIEDFMLLANSSVAEFTYSKFKDLAILRNHFAPSSP 906
Query: 525 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 584
+L +KHG L SS +S E +L +PM A YFC
Sbjct: 907 QLTNLAKLLAKHGHTLRHDSSKAIAESFETISNACPQPEAARAVLNIMMAKPMTRALYFC 966
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
S K D+ HYALA P+YTHFTSP+RRY D +VHR L AAL+
Sbjct: 967 SAFTKLPEDFFHYALAIPMYTHFTSPIRRYADCLVHRVLTAALD 1010
>gi|26327903|dbj|BAC27692.1| unnamed protein product [Mus musculus]
Length = 687
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 189/523 (36%), Positives = 269/523 (51%), Gaps = 65/523 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
RPTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 69 RPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 105
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 106 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 152
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + +E++ +R+DLR+ C+ ++DP
Sbjct: 153 GEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWSITEEDMKNREDLRHLCVCSVDPPGC 212
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL LS+G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 213 TDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 272
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 273 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 327
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S + + D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 328 --SAAMND------------DITTSLRGLNQLAKILKKGRIEKGALTLSSPEIRFHMDSE 373
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 374 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYDILVK 433
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
LQ+ T ++ SL++A D+ + L+ ATR M A YFCSG
Sbjct: 434 AAKSKNLQIKTDTAKSLADSLDRAESP---DFPYLNTLLRILATRCMMQAVYFCSG---M 487
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 488 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 530
>gi|255561455|ref|XP_002521738.1| mitotic control protein dis3, putative [Ricinus communis]
gi|223539129|gb|EEF40725.1| mitotic control protein dis3, putative [Ricinus communis]
Length = 934
Score = 295 bits (754), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 185/527 (35%), Positives = 273/527 (51%), Gaps = 64/527 (12%)
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE----YI 168
+ RP+G VV II+R+ W +Y G + + VP Y
Sbjct: 335 STRPSGHVVGIIKRN--------------WHSYCG--------SLEPMPVPAGSGGLVYA 372
Query: 169 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
+ PK+ + + L + + KR+ +VA +D W+ +S +P H +
Sbjct: 373 LFVSKDRRVPKIRIQTRQLQNLLDKRI----------IVA--VDSWDRQSRYPSGHYVRS 420
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFT 286
G G+ + + +L EN I FS + L+CLP +PW V +E+L + R DLR+ +F+
Sbjct: 421 IGEIGDRDTETEVVLIENDIDARPFSAQVLACLPPLPWSVSEEDLANPIRTDLRHLLVFS 480
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
+DP D+DDAL L G VGVHIADV+ FV P T LD EA R TSVY+++R+I
Sbjct: 481 VDPPGCKDIDDALHCTMLPHGNFEVGVHIADVTNFVHPSTPLDDEATQRGTSVYLVERRI 540
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP L+E++ SL V+RLAFS+ W++ +++ ++VI+SC LSY AQ +
Sbjct: 541 DMLPKPLTEDICSLRADVERLAFSVIWEMTPQAEIITTRYAKSVIKSCAALSYIEAQARM 600
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
D ++ V + ++++ ++KI++ +R GAL L +++
Sbjct: 601 DDSRLMDP-------------------VTKDLRNMNALAKIMRQRRIERGALTLASAEVK 641
Query: 467 FLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
F D E P D + + N + EEFML AN + AE I + FP +LLRRHP P
Sbjct: 642 FQIDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAEQILKQFPGCSLLRRHPTPTKDM 701
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
L + GL LD SSS SL++A + DD ++ ATR M A YFCS
Sbjct: 702 LEPLLQTAASVGLTLDVSSSKALADSLDRA---VSDDPYFNKLIRIMATRCMTQAVYFCS 758
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
GD ++ HY LA P+YTHFTSP+RRY D++VHR L A+L KL
Sbjct: 759 GDLS-PLEFHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGIYKL 804
>gi|66800249|ref|XP_629050.1| hypothetical protein DDB_G0293614 [Dictyostelium discoideum AX4]
gi|60462398|gb|EAL60619.1| hypothetical protein DDB_G0293614 [Dictyostelium discoideum AX4]
Length = 1006
Score = 295 bits (754), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 192/540 (35%), Positives = 276/540 (51%), Gaps = 55/540 (10%)
Query: 94 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSR-KD 152
+N+G+ + A S K+PTG+VV II+R+ W Y G K
Sbjct: 311 ENEGVEEDDDSIAKDSLISKKQPTGKVVGIIKRN--------------WKPYCGAVEFKQ 356
Query: 153 AKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARID 212
N ++ + ++ P + PK+ + + + + I KR + ID
Sbjct: 357 DDNNTTTKTSTGLHFLYFMPIDKRIPKIRIKSRQVSNLIGKR------------IVVAID 404
Query: 213 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC--VPWEVPQ 270
+W++ S +P H + G G+ E + +L + I F + CLP + V
Sbjct: 405 QWDKNSKYPSGHFVKDLGPLGDKETESQVLLLQFDIPHHPFGAAVMKCLPSPDIMDRVTS 464
Query: 271 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 330
+++ RKDLR CIF++DP TD+DDAL I+ L GI VGVHIADVS+FV GTA+D
Sbjct: 465 ADMVGRKDLRKECIFSVDPPGCTDIDDALHIKDLGKGIMEVGVHIADVSHFVQEGTAIDE 524
Query: 331 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS-AGDVVDRWIGRT 389
EA RSTSVY++ R+I MLP LS + SL VDR AFS W +N G+++ ++
Sbjct: 525 EAANRSTSVYLVDRRIDMLPGELSGNLCSLMSNVDRFAFSCIWKINQHTGEIIAVEYTKS 584
Query: 390 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 449
+IRSC L+YE AQ ID K S N + ++++L ++KIL+
Sbjct: 585 IIRSCASLTYEQAQIRIDDK----SQN---------------DQITVNLRNLNSLAKILR 625
Query: 450 DKRFTDGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
+RF GAL L + + F +E G P D + + N + EEFMLLAN A+ I +
Sbjct: 626 KQRFDRGALYLASPQVKFKTEELGGDPSDVEIYQLRETNSMIEEFMLLANIWVAKKIYKH 685
Query: 509 FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 568
FP A+LRRHP PN G + T++S SL+ A +K D Y F+
Sbjct: 686 FPGCAMLRRHPTPNKAAFDLLTKLIENKGYKFSTTTSKDLADSLDSAVDK-NDSY--FNT 742
Query: 569 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
L TR M A YF SG + D+ HY LA +YTHFTSP+RRYPD++VHR L +A+
Sbjct: 743 LCRIMTTRCMSPAKYFSSGSLPYE-DFNHYGLATDIYTHFTSPIRRYPDIIVHRLLASAI 801
>gi|157118647|ref|XP_001659195.1| ribonuclease [Aedes aegypti]
gi|108883257|gb|EAT47482.1| AAEL001397-PA [Aedes aegypti]
Length = 1210
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 192/583 (32%), Positives = 294/583 (50%), Gaps = 61/583 (10%)
Query: 162 VPDREYIQLTPTHPKYPKMVVLVKDLPDSI-KKRLEEGDATIEMELVAARIDEWNEESPF 220
V +Y++ P + P M V ++ P++I K +E IE + A I EW+ + P
Sbjct: 560 VSQSQYMKFAPRDMRMPFMRVYKQNWPEAIFKNDFKE----IESVIYQAEIIEWHNDIPI 615
Query: 221 PQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLR 280
A+++ G+ GE+E + AIL E + S +S + L+ LP +++P+EEL R+DLR
Sbjct: 616 --ANIMKSIGKCGELEVESQAILVEYDLDVSPYSEKILNSLPGSEFQIPEEELAKREDLR 673
Query: 281 NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVY 340
+ C+FTIDP TA DLDDALS + L +G +GVHI+DVSYF+ + LD ++R+TS+Y
Sbjct: 674 DECVFTIDPLTARDLDDALSCKILKNGNYEIGVHISDVSYFLREASELDELVKLRATSIY 733
Query: 341 MLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYE 400
M+ MLP L + SL PG D+LAFS+FW++ V+ +TVI SC +L+YE
Sbjct: 734 MVDGVYHMLPKSLC-FLCSLLPGEDKLAFSVFWEITPDAKVLKTRFAKTVINSCTQLAYE 792
Query: 401 HAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 460
HAQ ++D + + E +PQ+ + + + R + L ++ + +R +G L++
Sbjct: 793 HAQIMLDKP----NQDLKVEDFPQIRHGYTPNYLSRIVNQLQSIAVQFRARRMANGNLKI 848
Query: 461 ENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 519
K F D G P D + N + E+FMLLAN + AE F +++LR H
Sbjct: 849 NQPKLSFSLDPNTGKPTDFAIYELRTANQMIEDFMLLANASVAEFTHAKFDSTSVLRNHF 908
Query: 520 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 579
AP +++ +KHG L SS +S+E + D +L +PM
Sbjct: 909 APQDYQMKHLAKQLAKHGHSLRIDSSKAIAESVESIVDASSDPIAARAVLNIMIAKPMTR 968
Query: 580 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRM 639
A YFCS D ++ H+ALA P+YTHFTSP+RRY D +VHR L AL +++ +
Sbjct: 969 ARYFCSAFASDPEEFHHFALAIPMYTHFTSPIRRYADCLVHRVLAGALAVDEVPTRSPDE 1028
Query: 640 LPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRK 699
L K LTGI CN +K
Sbjct: 1029 LSK-----------LTGI-------------------------------------CNIKK 1040
Query: 700 LACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYI 742
+ DA LY LK++ L +EA VL +GP+ + + +
Sbjct: 1041 YNAKLAGDASSLLYFKHYLKQRTSLEAEAAVLDIGPQQIELVL 1083
>gi|118363036|ref|XP_001014739.1| RNB-like protein [Tetrahymena thermophila]
gi|89296510|gb|EAR94498.1| RNB-like protein [Tetrahymena thermophila SB210]
Length = 946
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 194/593 (32%), Positives = 298/593 (50%), Gaps = 67/593 (11%)
Query: 68 EREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERS 127
E E ++ N H ++++ K + +N +E++ + PTGRVV +I+R
Sbjct: 302 EDEEEDFKNVHEAVKTNNSNK---QLEEKYLNVVEKIKKL-----NLNPTGRVVGVIKRI 353
Query: 128 PRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSL--SVPDREYIQLTPTHPKYPKMVVLVK 185
R Y G N +L + RE+I P ++P +
Sbjct: 354 QR---------------YFCGEVTPEAINLPNLPSGIELREFI---PADGRFPHFYLRTT 395
Query: 186 DLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYE 245
+ K+++ G D W++ S +P H + G G+ + + + IL E
Sbjct: 396 NGSQLQGKKIQIG------------FDNWSKSSKYPLGHFKMLIGDSGDTKAEGDVILLE 443
Query: 246 NAICCSGFSPESLSCLPCV--PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIER 303
+ + FS + L CLP W++PQ E+ R DLR + +IDP D+DDAL
Sbjct: 444 HNVEYRAFSKQVLDCLPPQDDKWQIPQSEIKKRVDLRGINVCSIDPPGCKDIDDALHCIS 503
Query: 304 LSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPG 363
L +G VGVHIADVSYFV P TA+D EAQ R T+VY++ R+ MLP LL+E + SL
Sbjct: 504 LPNGNFEVGVHIADVSYFVRPDTAIDKEAQNRCTTVYLVDRRTDMLPKLLTETLCSLKDD 563
Query: 364 VDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP 423
DRLAFS+ W ++ ++++ +++IRS L+Y AQ +ID DV +
Sbjct: 564 GDRLAFSVVWVMDKDANIIETRYHKSIIRSVASLNYGKAQSMID---DVNDN-------- 612
Query: 424 QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF-DEYGTPYDSVLSG 482
S++ +SI++L ++K LK KR +GAL L +++ F F DE P D
Sbjct: 613 --------SELTKSIRNLNMLAKKLKQKRIENGALSLASTQVKFTFDDETHNPVDVQFYQ 664
Query: 483 REDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDT 542
+ N L EEFMLL N AE I FP ++LR+H P ++++E K G LD
Sbjct: 665 MYETNSLIEEFMLLGNVAVAEKIVSHFPSISILRQHSQPKPKQIKELSQILQKIGFNLDY 724
Query: 543 SSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFP 602
SS+ SL++ +D+ ++ TR M A+YFC+ D D ++ HY LA P
Sbjct: 725 SSNRNLADSLDKVNR--PNDHFFNKLVRIMTTRSMNEATYFCTAD-ADYPEFYHYGLAAP 781
Query: 603 VYTHFTSPLRRYPDLVVHRTLNAALEAEKL--YWKHRRMLPKNNHREGVRGRF 653
+YTHFTSP+RRY D++VHR L AA++ E + Y ++ + K + +R R
Sbjct: 782 LYTHFTSPIRRYADVLVHRLLAAAIDIEAIPAYMSNKLKMAKICEKMNMRNRM 834
>gi|410900646|ref|XP_003963807.1| PREDICTED: exosome complex exonuclease RRP44-like [Takifugu
rubripes]
Length = 947
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 193/553 (34%), Positives = 282/553 (50%), Gaps = 67/553 (12%)
Query: 99 NAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRS 158
NA E + ++PTG+VV II+R+ R G LNV+Q K +R
Sbjct: 318 NANEEEDKLQPFTAAQKPTGKVVGIIKRNWR--PFCGMLNVSQ---IKESTRH------- 365
Query: 159 SLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEE 217
TP + P++ R+E A+ + + + ID W +
Sbjct: 366 ----------LFTPAERRIPRI-------------RIETRQASALAGQRIMVAIDGWPKH 402
Query: 218 SPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRK 277
S +P H + G+ GE + + +L E+ + FS LS LP +PW + E+L R+
Sbjct: 403 SRYPNGHFVRSLGKAGEKDTEQEVLLLEHDVPHQPFSQAVLSFLPKMPWAITPEDLEKRE 462
Query: 278 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 337
DLR+ + ++DP TD+DDAL L DG VGVHIADVS+F+ PG ALD EA R T
Sbjct: 463 DLRHLTVCSVDPPGCTDIDDALHCRELEDGTLEVGVHIADVSHFIRPGNALDSEAANRGT 522
Query: 338 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKL 397
+VY+ R+I M+P LLS + SL VDR AFS W+LN +++ ++VI S L
Sbjct: 523 TVYLCGRRIDMVPELLSSNLCSLRSNVDRFAFSCIWELNQKSEILKTRFTKSVINSKASL 582
Query: 398 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 457
+Y AQ ID +S+ ++ +S++ L +++KILK +R +GA
Sbjct: 583 TYAEAQMRID-----DSTKN--------------DNITKSLRGLNKLAKILKKRRIENGA 623
Query: 458 LRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 516
L L + + F D E P D + N + EEFMLLAN + A+ I FPD A+LR
Sbjct: 624 LTLSSLEVRFHIDSETHDPIDLQAKELLETNSMVEEFMLLANISVAQKIYDEFPDCAMLR 683
Query: 517 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATR 575
+HPAP +++ T S+ SL++A + ++ F+ L+ ATR
Sbjct: 684 KHPAPPPSNYDILHKASKSQNVEIHTDSAKALAYSLDKAS---VEGFLYFNTLLRILATR 740
Query: 576 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYW- 634
M A YFCSG D+D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 741 CMMQAVYFCSG---MDSDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADTTYPD 797
Query: 635 ---KHRRMLPKNN 644
KH++ NN
Sbjct: 798 LMDKHKQSALSNN 810
>gi|296189127|ref|XP_002742627.1| PREDICTED: exosome complex exonuclease RRP44 [Callithrix jacchus]
Length = 959
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 196/547 (35%), Positives = 280/547 (51%), Gaps = 66/547 (12%)
Query: 93 QQNDGMNAIERLSAMISSYPTK---RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG- 148
Q D + E M+ + ++ +PTGRVV II+R+ W Y G
Sbjct: 315 QNEDDVEKEEEREQMLKTAVSENMLKPTGRVVGIIKRN--------------WRPYCGML 360
Query: 149 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELV 207
S+ D K++R L TP + P++ R+E A T+E +
Sbjct: 361 SKSDIKESRRHL---------FTPADKRIPRI-------------RIETRQASTLEGRRI 398
Query: 208 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE 267
ID W S +P H + G GE E + +L E+ + FS LS LP +PW
Sbjct: 399 IVAIDGWPRNSRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWG 458
Query: 268 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 327
+ ++++ +R+DLR+ CI ++DP TD+DDAL L +G VGVHIADVS+F+ PG A
Sbjct: 459 ITEKDMKNREDLRHLCICSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNA 518
Query: 328 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 387
LD E+ R T+VY+ +++I M+P LLS + SL VDRLAFS W++N + +++
Sbjct: 519 LDQESARRGTTVYLCEKRIDMVPELLSSNLCSLKCDVDRLAFSCIWEMNHSAEILKTKFT 578
Query: 388 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 447
++VI S L+Y AQ ID S+N D+ S++ L +++KI
Sbjct: 579 KSVINSKASLTYAEAQLRID------SANM-------------RDDITTSLRGLNKLAKI 619
Query: 448 LKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
LK KR GAL L + + F D E P D + N + EEFMLLAN + A+ I
Sbjct: 620 LKKKRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIH 679
Query: 507 RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLF 566
F + ALLR+HPAP L++ T ++ +SL+QA E Y L
Sbjct: 680 EEFSEHALLRKHPAPPPSNYEILVKAARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LN 737
Query: 567 DILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 626
+L ATR M A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A
Sbjct: 738 TLLRILATRCMMQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVA 794
Query: 627 LEAEKLY 633
+ A+ Y
Sbjct: 795 IGADCTY 801
>gi|52545700|emb|CAH56266.1| hypothetical protein [Homo sapiens]
Length = 958
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 271/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L +S+ F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSSEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|149050096|gb|EDM02420.1| similar to mitotic control protein dis3 homolog (predicted) [Rattus
norvegicus]
Length = 939
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
RPTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 321 RPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 357
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 358 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 404
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + +E++ +R+DLR+ C+ ++DP
Sbjct: 405 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEEDMKNREDLRHLCVCSVDPPGC 464
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL LS+G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 465 TDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 524
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 525 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 579
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S + + D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 580 --SAAMND------------DITTSLRGLNKLAKILKRGRIEKGALTLSSPEIRFHMDSE 625
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 626 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEVLVK 685
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ SL++A + D L +L ATR M A YFCSG D
Sbjct: 686 AAKSKNLEIRTDTAKSLADSLDRA--ECPDFPYLNTLLRILATRCMMQAVYFCSG---MD 740
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
+D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 741 SDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 782
>gi|291001707|ref|XP_002683420.1| exosome complex exonuclease RRP44 [Naegleria gruberi]
gi|284097049|gb|EFC50676.1| exosome complex exonuclease RRP44 [Naegleria gruberi]
Length = 1053
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 198/562 (35%), Positives = 284/562 (50%), Gaps = 74/562 (13%)
Query: 75 INGHHP----STSDSTEK-VSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPR 129
+ +HP S SDS+EK ++SS + +N+ ERL PTG+VV II+R+
Sbjct: 353 LENNHPLTGTSESDSSEKSLTSSFYSRFVNS-ERLI----------PTGKVVGIIKRN-- 399
Query: 130 RDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPD 189
W +Y G +D S + P PK+ ++ + +
Sbjct: 400 ------------WRSYCGSLDEDTD------SEEGLNKVLFVPVDRCIPKIRIVSRQCKE 441
Query: 190 SIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC 249
+ KR + ID W+ S +P H + G + + IL E+ +
Sbjct: 442 LMNKR------------ICVMIDGWSVNSKYPDGHYISTIGEIYNTDTESEVILLEHDVP 489
Query: 250 CSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 309
FS + CLP W+ ++++ R+DLR+ I ++DP TD+DDAL +L DG
Sbjct: 490 HYKFSQSIIDCLPPKDWQPTEKDMERRRDLRHLNIVSVDPPGCTDIDDALHAIQLPDGSI 549
Query: 310 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 369
+GVHIADV+ FV GTA+DIEA R T+VY++ R+I MLP LL+ + SL VDRLAF
Sbjct: 550 EIGVHIADVTNFVKEGTAIDIEAAKRGTTVYLVDRRIEMLPSLLTNNLCSLRQHVDRLAF 609
Query: 370 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 429
S+ W + GD+ +++IRS ++YE AQ +ID K E + L
Sbjct: 610 SVIWKFSPEGDIKSVDYTKSLIRSRKSMTYEEAQKVIDDK---ERDDELAT--------- 657
Query: 430 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNF 488
++ L ++SKILK KR G+L L + F + E P D L + N
Sbjct: 658 -------DLRLLMQISKILKKKRNEAGSLTLASPAVKFSMEAESSNPTDVELYQLRETNS 710
Query: 489 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 548
+ EEFMLLAN A+ I + FP A LRRHP N +K +HG+ LD SSS
Sbjct: 711 MVEEFMLLANIAVAKKITKEFPMVACLRRHPPVNPKKFEPLLEMLKRHGINLDISSSKIL 770
Query: 549 HQSLEQAREK--LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYT 605
+++L R +KD Y+ D L+ TR M+ A YF SGD + W HY LA P+YT
Sbjct: 771 NETLSNIRSSGLIKDKYM--DTLVRIMVTRCMEQAVYFISGDCSQEEYW-HYGLAVPIYT 827
Query: 606 HFTSPLRRYPDLVVHRTLNAAL 627
HFTSP+RRY D++VHR L AA+
Sbjct: 828 HFTSPIRRYADVIVHRLLGAAI 849
>gi|188595648|ref|NP_001120955.1| exosome complex exonuclease RRP44 [Rattus norvegicus]
gi|187469071|gb|AAI66824.1| Dis3 protein [Rattus norvegicus]
Length = 957
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
RPTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 339 RPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 375
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 376 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 422
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + +E++ +R+DLR+ C+ ++DP
Sbjct: 423 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEEDMKNREDLRHLCVCSVDPPGC 482
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL LS+G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 483 TDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 542
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 543 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 597
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S + + D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 598 --SAAMND------------DITTSLRGLNKLAKILKRGRIEKGALTLSSPEIRFHMDSE 643
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 644 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEVLVK 703
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ SL++A + D L +L ATR M A YFCSG D
Sbjct: 704 AAKSKNLEIRTDTAKSLADSLDRA--ECPDFPYLNTLLRILATRCMMQAVYFCSG---MD 758
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
+D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 759 SDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 800
>gi|354474493|ref|XP_003499465.1| PREDICTED: exosome complex exonuclease RRP44-like [Cricetulus
griseus]
Length = 1070
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 192/537 (35%), Positives = 274/537 (51%), Gaps = 65/537 (12%)
Query: 102 ERLSAMISSYPTK--RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRS 158
ER A+ ++ K RPTGRVV II+R+ W Y G S+ K++R
Sbjct: 437 ERQLALKTAVSEKMLRPTGRVVGIIKRN--------------WRPYCGMLSKSGIKESRR 482
Query: 159 SLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEE 217
L TP + P++ R+E A T+E + +D W
Sbjct: 483 HL---------FTPADKRIPRI-------------RIETRQASTLEGRRIIVAVDGWPRN 520
Query: 218 SPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRK 277
S +P H + G GE E + +L E+ + FS LS LP +PW + + ++ +R+
Sbjct: 521 SRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITENDMKNRE 580
Query: 278 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 337
DLR+ C+ ++DP TD+DDAL LS+G VGVHIADVS+F+ PG ALD E+ R T
Sbjct: 581 DLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGT 640
Query: 338 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKL 397
+VY+ +++I M+P LLS + SL VDRLAFS W++N +++ ++VI S L
Sbjct: 641 TVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASL 700
Query: 398 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 457
+Y AQ ID S + + D+ S++ L +++KILK R GA
Sbjct: 701 TYAEAQMRID-------SAAMND------------DITTSLRGLNKLAKILKKGRIEKGA 741
Query: 458 LRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 516
L L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR
Sbjct: 742 LTLSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLR 801
Query: 517 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 576
+HPAP L++ T ++ SL+QA + D L +L ATR
Sbjct: 802 KHPAPPPSNYEILVKAAKSKNLEIKTDTAKSLADSLDQA--ECPDFPYLNTLLRILATRC 859
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
M A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 860 MMQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTY 913
>gi|357114232|ref|XP_003558904.1| PREDICTED: exosome complex exonuclease RRP44-like isoform 1
[Brachypodium distachyon]
Length = 934
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 215/694 (30%), Positives = 325/694 (46%), Gaps = 114/694 (16%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RP GR+V II+R+ W +Y GS + S V ++
Sbjct: 338 RPVGRIVGIIKRN--------------WNSY-CGSLEPMPMPAGSGGVAHALFVS---KD 379
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ PK+ + + L + + KR + +D W+ S +P H + G G+
Sbjct: 380 RRIPKIRIQTRQLGNLLNKR------------IVVAVDSWDVLSRYPSGHYVRTIGDIGD 427
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 292
E + +L EN I FS + L+CLP +PW + ++L + R+DLR+ +F++DP
Sbjct: 428 KETETEVVLIENDINTRPFSTQVLACLPPLPWSLSPDDLANPNRQDLRHVRVFSVDPPGC 487
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D+DDAL L +G VGVHIADV+ FVLPGT LD EA R+TSVY++ ++I MLP
Sbjct: 488 RDIDDALHCTPLPNGNFEVGVHIADVTNFVLPGTPLDEEASQRATSVYLVGQRIDMLPKP 547
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
L+E+V SL V+RLAFS+ W++ D++ ++VI+SC +SY AQ +D V
Sbjct: 548 LTEDVCSLRADVERLAFSVIWEMTPDADIISSRYTKSVIKSCAAMSYVEAQARMDDSRLV 607
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
+ + +++L ++KI++++R GAL L +++ F D E
Sbjct: 608 DP-------------------LTVDLRNLNSLAKIMRNRRCERGALTLASAEVKFEIDSE 648
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + + N + EEFML AN + AE I + +P +LLRRHP+P L
Sbjct: 649 THDPLDIGIYQIREANQMIEEFMLAANVSVAEKILKHYPLCSLLRRHPSPTKEMLEPLLR 708
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
S GL LD SSS SL+ A+ +DD ++ ATR M A YFCSGD
Sbjct: 709 TASSVGLNLDVSSSKALADSLDNAK---RDDPYFNKLIRILATRCMTQAVYFCSGDLS-L 764
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRG 651
+++ HY LA +YTHFTSP+RRY D+VVHR L AAL+ K
Sbjct: 765 SEYYHYGLASALYTHFTSPIRRYADVVVHRLLAAALDIAK-------------------- 804
Query: 652 RFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVK 711
L +F D L +A + N R + A V+
Sbjct: 805 --LPPVFQDGPQ------------------------LTGIADNLNYRHRNAQMASRASVE 838
Query: 712 LYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLV 771
L+ I + + V +EAR++ + +++ K IE IY +W+
Sbjct: 839 LHTLIYFRTRPV-DTEARIVKIKANGFIVFVPKFGIEGPIYLTAKGDKGADWVVDE---- 893
Query: 772 LSLCAHKRSFKRGGPGNYRALEEVAL---VVRPN 802
H++ K G +Y L+ V + VV P
Sbjct: 894 ----VHQKVTKPGANISYAVLQSVMIHMEVVEPQ 923
>gi|5262619|emb|CAB45749.1| hypothetical protein [Homo sapiens]
Length = 632
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 192/535 (35%), Positives = 274/535 (51%), Gaps = 63/535 (11%)
Query: 102 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSL 160
ER+ S +PTGRVV II+R+ W Y G S+ D K++R L
Sbjct: 1 ERMLKTAVSEKMLKPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL 46
Query: 161 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESP 219
TP + P++ R+E A T+E + ID W S
Sbjct: 47 ---------FTPADKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSR 84
Query: 220 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 279
+P H + G GE E + +L E+ + FS LS LP +PW + ++++ +R+DL
Sbjct: 85 YPNGHFVRNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDL 144
Query: 280 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 339
R+ CI ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+V
Sbjct: 145 RHLCICSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTV 204
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 399
Y+ +++I M+P LLS + SL VDRLAFS W++N +++ ++VI S L+Y
Sbjct: 205 YLCEKRIDMVPELLSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTY 264
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
AQ ++S+N D+ S++ L +++KILK +R GAL
Sbjct: 265 AEAQ------LRIDSANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALT 305
Query: 460 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR+H
Sbjct: 306 LSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKH 365
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 578
PAP L++ T ++ +SL+QA E Y L +L ATR M
Sbjct: 366 PAPPPSNYEILVKAARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMM 423
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 424 QAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 475
>gi|302803941|ref|XP_002983723.1| hypothetical protein SELMODRAFT_180518 [Selaginella moellendorffii]
gi|300148560|gb|EFJ15219.1| hypothetical protein SELMODRAFT_180518 [Selaginella moellendorffii]
Length = 939
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 208/625 (33%), Positives = 307/625 (49%), Gaps = 79/625 (12%)
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 172
+ RP GRV+ II+R+ W Y GS + + SV + ++
Sbjct: 339 SSRPNGRVIGIIKRN--------------WRAY-CGSLEPMTTPAGAGSVANALFVS--- 380
Query: 173 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ PK+ + + + + KR + +D W+ S +P H + G+
Sbjct: 381 ADRRIPKIRIQTRQFGNLVDKR------------IVVSVDSWDLNSRYPSGHYVKTVGKI 428
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPS 290
G+ + +L EN I FS + L+CLP +PW VP E L R+DLRN +F++DP
Sbjct: 429 GDRNTESEVLLIENDINNRPFSDQVLACLPPLPWSVPAEALHDPHREDLRNLRVFSVDPI 488
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDAL L G +VGVHIADV+ FV PGT LDIEA+ R TSVY+++R+I MLP
Sbjct: 489 GCKDIDDALHCTLLPTGNYQVGVHIADVTSFVHPGTPLDIEARERGTSVYLVERRIDMLP 548
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 410
L+E+V SL V+R FS+ W+++S D++ + VI+S LSY AQ +D
Sbjct: 549 KPLTEDVCSLRADVERFVFSVIWEMSSEADIISVRFTKGVIKSSAALSYVEAQARMD--- 605
Query: 411 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 470
D S+ L ++++ ++K+L+ +R GAL L + + F D
Sbjct: 606 DSRMSDPL----------------TTDLRNMNRLAKVLRQRRIERGALTLASPEVKFEID 649
Query: 471 -EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
E P D + + N + EEFMLLAN + A+ I +FP +LLRRHP P +
Sbjct: 650 TETHNPLDVGMYQVRESNHMVEEFMLLANISVAKKILSSFPVFSLLRRHPTPTPKMFEPL 709
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
S G++LD +SS +L+ A + DD ++ ATR M A YFCSG+
Sbjct: 710 LKIASAVGIKLDITSSMTLANTLDLA---VGDDPYFNKLIRILATRCMTQAVYFCSGELS 766
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR------RMLPKN 643
++ HY LA +YTHFTSP+RRY D++VHR L AAL+ EKL R ++
Sbjct: 767 -PPEFQHYGLASAIYTHFTSPIRRYADVIVHRLLAAALDLEKLSPSLRDKSEVTKIADNL 825
Query: 644 NHRE---GVRGR----FLTGIFY-----DKDAAESLEGREALSVAALKYGVPCADILVNV 691
N+R + GR T IF+ D DA L V KYG+ LV+
Sbjct: 826 NYRHRNAQMAGRASVELHTLIFFRNRPTDADARIVQIRSNGLIVFVPKYGIEGPVFLVDK 885
Query: 692 ATHCN-----DRKLACRNVKDACVK 711
A+ + + + C N +D K
Sbjct: 886 ASKSSTNWIMNEEQQCANARDGSTK 910
>gi|126337588|ref|XP_001365109.1| PREDICTED: exosome complex exonuclease RRP44 [Monodelphis
domestica]
Length = 959
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 190/525 (36%), Positives = 270/525 (51%), Gaps = 69/525 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RP+GRVV II+R+ R G L S+ D K++R L TP
Sbjct: 341 RPSGRVVGIIKRNWR--PFCGML-----------SKSDIKESRRHL---------FTPAD 378
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ P++ R+E A T+E + + ID W + S +P H + G G
Sbjct: 379 KRIPRI-------------RIETRQASTLEGQRIIVAIDGWPKNSRYPNGHFVKNLGAVG 425
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ E + +L E+ + FS LS LP +PW + +E++ +R+DLR+ C+ ++DP T
Sbjct: 426 DKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWNITEEDMKNREDLRHLCVCSVDPPKCT 485
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P LL
Sbjct: 486 DIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESAKRGTTVYLCEKRIDMVPELL 545
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 546 SSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLTYAEAQMRID------ 599
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
S T+ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 600 -SATMND------------DITTSLRGLNKLAKILKRRRIDAGALILSSPEVRFHVDSET 646
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P D + N + EEFMLLAN + A+ I F ++ALLR+HPAP
Sbjct: 647 HDPIDLQTKELRETNSMVEEFMLLANVSVAKKIHEEFSENALLRKHPAPPPSNYEVLVKA 706
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDY----VLFDILINYATRPMQLASYFCSGDF 588
L T S+ SL+Q D+ LF IL ATR M A YFCSG
Sbjct: 707 AKSKNLDFKTDSAKALADSLDQVESP---DFPYLSTLFRIL---ATRCMMQAVYFCSG-- 758
Query: 589 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 759 -MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTY 802
>gi|190014623|ref|NP_055768.3| exosome complex exonuclease RRP44 isoform a [Homo sapiens]
gi|73620993|sp|Q9Y2L1.2|RRP44_HUMAN RecName: Full=Exosome complex exonuclease RRP44; AltName:
Full=Protein DIS3 homolog; AltName: Full=Ribosomal
RNA-processing protein 44
gi|119600923|gb|EAW80517.1| KIAA1008, isoform CRA_a [Homo sapiens]
Length = 958
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|159149063|dbj|BAF92610.1| DIS3 [Homo sapiens]
Length = 958
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLQCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|33440520|gb|AAH56143.1| DIS3 mitotic control homolog (S. cerevisiae) [Homo sapiens]
Length = 958
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|344275368|ref|XP_003409484.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Loxodonta
africana]
Length = 956
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 191/547 (34%), Positives = 278/547 (50%), Gaps = 66/547 (12%)
Query: 93 QQNDGMNAIERLSAMISSYPTKR---PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG- 148
Q D M E +++ + ++ PTGRVV II R+ W Y G
Sbjct: 315 QNEDNMEREEERESILKTAVNEKMLKPTGRVVGIIRRN--------------WRPYCGML 360
Query: 149 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELV 207
S+ D K++R L TP + P++ R+E A T+E + +
Sbjct: 361 SKSDIKESRRHL---------FTPADKRIPRI-------------RIETRQASTLEGQRI 398
Query: 208 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE 267
ID W S +P H + G G+ E + +L E+ + FS LS LP +PW
Sbjct: 399 IVAIDGWPRNSRYPNGHFVKNLGDAGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWA 458
Query: 268 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 327
+ ++++ R+DLR+ C+ ++DP TD+DDAL +L +G VGVHIADVS+F+ PG A
Sbjct: 459 ITEKDMKYREDLRHLCVCSVDPPGCTDIDDALHCRQLENGNLEVGVHIADVSHFIRPGNA 518
Query: 328 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 387
LD E+ R T+VY+ +++I M+P LLS + SL VDRLAFS W++N +++
Sbjct: 519 LDQESARRGTTVYLCEKRIDMVPELLSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFT 578
Query: 388 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 447
++ I S L+Y AQ ID S T+ + D+ S++ L +++KI
Sbjct: 579 KSAINSKASLTYAEAQMRID-------STTMND------------DITTSLRGLNKLAKI 619
Query: 448 LKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
LK +R GAL L + + F D E P D + N + EEFMLLAN + A+ I
Sbjct: 620 LKKRRIEKGALTLSSPEVRFHMDSETHDPIDMQTKELRETNSMVEEFMLLANISVAKKIH 679
Query: 507 RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLF 566
F + ALLR+HPAP L++ T ++ SL++A E Y L
Sbjct: 680 EEFSEHALLRKHPAPPPSNYEILVKAAKSKNLEIKTDTAKSLADSLDKA-ESPTFPY-LN 737
Query: 567 DILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 626
+L ATR M A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A
Sbjct: 738 TLLRILATRCMMQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVA 794
Query: 627 LEAEKLY 633
+ A+ Y
Sbjct: 795 IGADSTY 801
>gi|17225572|gb|AAL37479.1|AF330044_1 KIAA1008 protein [Homo sapiens]
gi|189054486|dbj|BAG37259.1| unnamed protein product [Homo sapiens]
Length = 958
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|313216487|emb|CBY37789.1| unnamed protein product [Oikopleura dioica]
Length = 907
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 204/643 (31%), Positives = 305/643 (47%), Gaps = 110/643 (17%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTG +V II+R+ W NY G + +
Sbjct: 312 PTGEIVGIIKRA--------------WRNYCG-------------VIEGSTRVLFLAAQR 344
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + + I +RL +VA ID W+ +S +P H++ V G G+
Sbjct: 345 QIPKIRIETRQVDRLIGQRL----------VVA--IDGWSRKSRYPNGHLVKVLGNVGDK 392
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
+ + +L E+ + FSP+ LSCLP W + +EEL R DLR + I ++DP TD+
Sbjct: 393 KTENEVLLLEHDVKHDPFSPKVLSCLPDKNWTITEEELAKRVDLREYDIASVDPPGCTDI 452
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDAL ++L +G VGVHIADVS+F+ PGTALD EA R TSVY+ +I M+P+LLS
Sbjct: 453 DDALHCKKLPNGNYEVGVHIADVSHFIKPGTALDEEAAQRGTSVYLADNRIDMVPILLSS 512
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+ SL G +RLAFS W+L+ +V ++VI+S +YE AQ ID K +S
Sbjct: 513 NLCSLRGGEERLAFSTIWELDDNAQIVSVKFHKSVIKSKSAFTYEEAQIRIDDKSKTDS- 571
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
+ S++ L ++K LK +R DGAL L + + F D E
Sbjct: 572 ------------------LTESLRGLNYLAKKLKAQRLEDGALTLASVEVRFHLDSETAD 613
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P D ++ N + EEFMLLAN + AE I FP SA+LRRHP P +
Sbjct: 614 PIDLYTKELKETNSMVEEFMLLANCSVAEHIRTEFPQSAVLRRHPKPPVSNFDPLVRAAK 673
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
L+ +SS + SL A + D ++ +L +TR M A YFC+G F+ D W
Sbjct: 674 AKDFHLNVNSSRELADSLNLAVD--PSDPMVNTVLRVMSTRSMMQAVYFCTG-FESDC-W 729
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HY LA P+YTHFTSP+RRY D++VHR L A++ A+ +L KN+
Sbjct: 730 -HYGLAAPIYTHFTSPIRRYADIMVHRALAASIGADTTTPD---ILDKNH---------- 775
Query: 655 TGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYM 714
+ NV + N R + + A + L+
Sbjct: 776 ---------------------------------INNVCKNINFRNRMAQQAQRASIALHT 802
Query: 715 WILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVE 757
+ +K+ + EA V+ + + + I + +E I+ +E+E
Sbjct: 803 QLYFRKQGARMEEAYVMQVKQNAIGVLIPQFGMEGTIFLNEIE 845
>gi|119113846|ref|XP_314089.3| AGAP005191-PA [Anopheles gambiae str. PEST]
gi|116128315|gb|EAA09476.3| AGAP005191-PA [Anopheles gambiae str. PEST]
Length = 967
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 170/436 (38%), Positives = 244/436 (55%), Gaps = 25/436 (5%)
Query: 200 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 259
AT+ + + ID+W S +PQ H + G G E + IL E+ + S FS + L+
Sbjct: 385 ATLLSQRIIVAIDQWPRHSRYPQGHFVRALGPIGSKETENEVILLEHDVPHSRFSEDVLA 444
Query: 260 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 319
CLP +PW + +L R DLR+ + ++DP TD+DDAL RL +G VGVHIADV
Sbjct: 445 CLPELPWTITAADLQRRVDLRDITVCSVDPPGCTDIDDALHARRLPNGNIEVGVHIADVG 504
Query: 320 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 379
+F+ PGTALD EA R+T+VY++ ++I M+P LLS + SL G +R AFS W+L+
Sbjct: 505 HFIRPGTALDREAASRATTVYLVDKRIDMVPGLLSSNLCSLRGGEERFAFSCIWELDDEA 564
Query: 380 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 439
++ + ++VI+S L+YE AQ IID D + +N DV S++
Sbjct: 565 NIRNTRYHKSVIKSKSALTYEEAQIIID---DAKQTN----------------DVATSLR 605
Query: 440 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 498
L ++KILK +R GAL L + + F D E P D + N + EEFMLLAN
Sbjct: 606 LLNRLAKILKKRRTEKGALVLASPEIRFQVDSETHDPIDVKAKQLLETNSMVEEFMLLAN 665
Query: 499 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
+ AE I + FP+ A+LRRHP P G ++ T+S + SL++A
Sbjct: 666 VSVAEKIEQEFPECAMLRRHPCPPQANYEPLVKAAEHQGFEILTTSGKELATSLDKA--- 722
Query: 559 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
+K D F+ ++ ATR M A YF SG + D ++ HY LA P+YTHFTSP+RRY D+
Sbjct: 723 VKPDNPYFNTMLRILATRCMMQAVYFISGTVQRD-EFFHYGLAAPIYTHFTSPIRRYADI 781
Query: 618 VVHRTLNAALEAEKLY 633
+VHR L A + A+ Y
Sbjct: 782 IVHRLLAACIGADSTY 797
>gi|119600925|gb|EAW80519.1| KIAA1008, isoform CRA_c [Homo sapiens]
Length = 796
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 178 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 214
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 215 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 261
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 262 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 321
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 322 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 381
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 382 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 436
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 437 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 482
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 483 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 542
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 543 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 597
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 598 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 639
>gi|119600924|gb|EAW80518.1| KIAA1008, isoform CRA_b [Homo sapiens]
gi|119600927|gb|EAW80521.1| KIAA1008, isoform CRA_b [Homo sapiens]
Length = 694
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 76 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 112
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 113 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 159
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 160 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 219
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 220 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 279
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ +
Sbjct: 280 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQ------LRI 333
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
+S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 334 DSANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 380
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 381 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 440
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 441 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 495
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 496 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 537
>gi|344242628|gb|EGV98731.1| Exosome complex exonuclease RRP44 [Cricetulus griseus]
Length = 621
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 267/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
RPTGRVV II+R+ W Y G S+ K++R L TP
Sbjct: 3 RPTGRVVGIIKRN--------------WRPYCGMLSKSGIKESRRHL---------FTPA 39
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + +D W S +P H + G
Sbjct: 40 DKRIPRI-------------RIETRQASTLEGRRIIVAVDGWPRNSRYPNGHFVKNLGDV 86
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + + ++ +R+DLR+ C+ ++DP
Sbjct: 87 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITENDMKNREDLRHLCVCSVDPPGC 146
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL LS+G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 147 TDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 206
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 207 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 261
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S + + D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 262 --SAAMND------------DITTSLRGLNKLAKILKKGRIEKGALTLSSPEVRFHMDSE 307
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 308 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 367
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ SL+QA + D L +L ATR M A YFCSG D
Sbjct: 368 AAKSKNLEIKTDTAKSLADSLDQA--ECPDFPYLNTLLRILATRCMMQAVYFCSG---MD 422
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 423 NDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTY 464
>gi|168278787|dbj|BAG11273.1| exosome complex exonuclease RRP44 [synthetic construct]
Length = 928
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 393
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 394 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 453
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 514 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 568
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 569 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 675 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 729
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 771
>gi|190014625|ref|NP_001121698.1| exosome complex exonuclease RRP44 isoform b [Homo sapiens]
gi|119600926|gb|EAW80520.1| KIAA1008, isoform CRA_d [Homo sapiens]
Length = 928
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 393
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 394 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 453
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 514 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 568
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 569 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 675 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 729
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 771
>gi|40789019|dbj|BAA76852.2| KIAA1008 protein [Homo sapiens]
Length = 935
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 317 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 353
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 354 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 400
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 401 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 460
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 461 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 520
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 521 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 575
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 576 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 621
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 622 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 681
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 682 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 736
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 737 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 778
>gi|414864568|tpg|DAA43125.1| TPA: hypothetical protein ZEAMMB73_527148 [Zea mays]
Length = 934
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 200/559 (35%), Positives = 287/559 (51%), Gaps = 70/559 (12%)
Query: 80 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPT--KRPTGRVVSIIERSPRRDGIVGFL 137
P+++D + ++S Q S + SS P+ RP GRV+ II+R+
Sbjct: 311 PNSADDAPRNTNSTQ----------STVGSSAPSISSRPVGRVMGIIKRN---------- 350
Query: 138 NVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEE 197
W +Y GS + S V ++ + PK+ + + L + + KR
Sbjct: 351 ----WNSY-CGSLQPMPMPAGSGGVAHALFVS---KDRRVPKIRIQTRQLENLVNKR--- 399
Query: 198 GDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPES 257
+ +D W+ S +P H + G G+ E + +L EN I FS +
Sbjct: 400 ---------IVVAVDSWDVLSRYPSGHYVRTIGDIGDKETETEVVLIENDINTRPFSTQV 450
Query: 258 LSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHI 315
L+CLP +PW + E+L + R+DLR +F++DP D+DDAL L +G VGVHI
Sbjct: 451 LACLPPLPWTLSPEDLANPNRQDLRQVRVFSVDPPGCRDIDDALHCTLLPNGNFEVGVHI 510
Query: 316 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 375
ADV+ FV PGT LD EA R TSVY++ ++I MLP L+E+V SL V+RLAFS+ W++
Sbjct: 511 ADVTNFVHPGTPLDEEAAQRGTSVYLVGQRIDMLPKPLTEDVCSLRADVERLAFSVIWEM 570
Query: 376 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVV 435
DV+ ++VI+SC +SY AQ +D V+ +
Sbjct: 571 TPDADVISTRYTKSVIKSCAAMSYVEAQARMDDSRLVDP-------------------LT 611
Query: 436 RSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFM 494
+++L ++KI++ +R GAL L +++ F D E P D + + N + EEFM
Sbjct: 612 VDLRNLNSLAKIMRQRRCERGALTLASAEVKFEIDSETHDPLDIGIYQIREANQMIEEFM 671
Query: 495 LLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 554
L AN + AE I + FP +LLRRHP+P L S GL LD SSS +SL+
Sbjct: 672 LAANVSVAEKILKHFPLCSLLRRHPSPTKEMLEPLLRTASSIGLNLDVSSSKALAESLDN 731
Query: 555 AREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
A K D Y F+ LI ATR M A YFCSGD +++ HY LA +YTHFTSP+RR
Sbjct: 732 A--KSNDPY--FNKLIRILATRCMTQAVYFCSGDLT-FSEYYHYGLAASLYTHFTSPIRR 786
Query: 614 YPDLVVHRTLNAALEAEKL 632
Y D+VVHR L AAL KL
Sbjct: 787 YADVVVHRLLAAALNIAKL 805
>gi|223944351|gb|ACN26259.1| unknown [Zea mays]
gi|414864569|tpg|DAA43126.1| TPA: hypothetical protein ZEAMMB73_527148 [Zea mays]
Length = 935
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 200/559 (35%), Positives = 287/559 (51%), Gaps = 70/559 (12%)
Query: 80 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPT--KRPTGRVVSIIERSPRRDGIVGFL 137
P+++D + ++S Q S + SS P+ RP GRV+ II+R+
Sbjct: 312 PNSADDAPRNTNSTQ----------STVGSSAPSISSRPVGRVMGIIKRN---------- 351
Query: 138 NVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEE 197
W +Y GS + S V ++ + PK+ + + L + + KR
Sbjct: 352 ----WNSY-CGSLQPMPMPAGSGGVAHALFVS---KDRRVPKIRIQTRQLENLVNKR--- 400
Query: 198 GDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPES 257
+ +D W+ S +P H + G G+ E + +L EN I FS +
Sbjct: 401 ---------IVVAVDSWDVLSRYPSGHYVRTIGDIGDKETETEVVLIENDINTRPFSTQV 451
Query: 258 LSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHI 315
L+CLP +PW + E+L + R+DLR +F++DP D+DDAL L +G VGVHI
Sbjct: 452 LACLPPLPWTLSPEDLANPNRQDLRQVRVFSVDPPGCRDIDDALHCTLLPNGNFEVGVHI 511
Query: 316 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 375
ADV+ FV PGT LD EA R TSVY++ ++I MLP L+E+V SL V+RLAFS+ W++
Sbjct: 512 ADVTNFVHPGTPLDEEAAQRGTSVYLVGQRIDMLPKPLTEDVCSLRADVERLAFSVIWEM 571
Query: 376 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVV 435
DV+ ++VI+SC +SY AQ +D V+ +
Sbjct: 572 TPDADVISTRYTKSVIKSCAAMSYVEAQARMDDSRLVDP-------------------LT 612
Query: 436 RSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFM 494
+++L ++KI++ +R GAL L +++ F D E P D + + N + EEFM
Sbjct: 613 VDLRNLNSLAKIMRQRRCERGALTLASAEVKFEIDSETHDPLDIGIYQIREANQMIEEFM 672
Query: 495 LLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 554
L AN + AE I + FP +LLRRHP+P L S GL LD SSS +SL+
Sbjct: 673 LAANVSVAEKILKHFPLCSLLRRHPSPTKEMLEPLLRTASSIGLNLDVSSSKALAESLDN 732
Query: 555 AREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
A K D Y F+ LI ATR M A YFCSGD +++ HY LA +YTHFTSP+RR
Sbjct: 733 A--KSNDPY--FNKLIRILATRCMTQAVYFCSGDLT-FSEYYHYGLAASLYTHFTSPIRR 787
Query: 614 YPDLVVHRTLNAALEAEKL 632
Y D+VVHR L AAL KL
Sbjct: 788 YADVVVHRLLAAALNIAKL 806
>gi|395833515|ref|XP_003789776.1| PREDICTED: exosome complex exonuclease RRP44 [Otolemur garnettii]
Length = 958
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 269/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATI-EMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A++ E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASVLEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + + ++ +R+DLR+ C+ ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITENDMKNREDLRHLCVCSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGHLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S T+ + D+ S++ L +++KILK KR GAL L + + F D E
Sbjct: 599 --SATMND------------DITSSLRGLNKLAKILKKKRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AAKSKNLEIKTDTAKSLADSLDRA-ESPAFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|71296758|gb|AAH38101.1| DIS3 protein [Homo sapiens]
Length = 796
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 178 KPTGRVVVIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 214
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 215 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 261
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 262 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 321
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 322 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 381
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 382 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 436
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 437 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 482
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 483 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 542
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 543 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 597
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 598 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 639
>gi|242037077|ref|XP_002465933.1| hypothetical protein SORBIDRAFT_01g048480 [Sorghum bicolor]
gi|241919787|gb|EER92931.1| hypothetical protein SORBIDRAFT_01g048480 [Sorghum bicolor]
Length = 934
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 232/732 (31%), Positives = 337/732 (46%), Gaps = 128/732 (17%)
Query: 80 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPT--KRPTGRVVSIIERSPRRDGIVGFL 137
P+++D + ++S Q S + SS P+ RP GRVV II+R+
Sbjct: 311 PNSADDAPRNTNSTQ----------STVGSSAPSVSSRPVGRVVGIIKRN---------- 350
Query: 138 NVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEE 197
W +Y GS + S V ++ + PK+ + + L + + KR
Sbjct: 351 ----WNSY-CGSLEPMPMPAGSGGVAHALFVS---KDRRVPKIRIQTRQLENLVNKR--- 399
Query: 198 GDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPES 257
+ +D W+ S +P H + G G+ E + +L EN I FS +
Sbjct: 400 ---------IVVAVDSWDVLSRYPSGHYVRTIGDIGDKETETEVVLIENDINTRPFSTQV 450
Query: 258 LSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHI 315
L+CLP +PW + E+L + R+DLR +F++DP D+DDAL L +G VGVHI
Sbjct: 451 LACLPPLPWTLSPEDLANPNRQDLRQVRVFSVDPPGCRDIDDALHCTLLPNGNFEVGVHI 510
Query: 316 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 375
ADV+ FV PGT LD EA R TSVY++ ++I MLP L+E+V SL V+RLAFS+ W++
Sbjct: 511 ADVTNFVHPGTPLDEEAAQRGTSVYLVGQRIDMLPKPLTEDVCSLRADVERLAFSVIWEM 570
Query: 376 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVV 435
DV+ ++VI+SC +SY AQ +D V+ +
Sbjct: 571 TPDADVISTRYTKSVIKSCAAMSYVEAQARMDDSRLVDP-------------------LT 611
Query: 436 RSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFM 494
+++L ++KI++ +R GAL L +++ F D E P D + + N + EEFM
Sbjct: 612 VDLRNLNSLAKIMRQRRCERGALTLASAEVKFEIDSETHDPLDIGIYQIREANQMIEEFM 671
Query: 495 LLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 554
L AN + AE I + FP +LLRRHP+P L S GL LD SSS +SL+
Sbjct: 672 LAANVSVAEKILKHFPLCSLLRRHPSPTKEMLEPLLRTASSVGLNLDVSSSKALAESLDN 731
Query: 555 AREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
A K D Y F+ LI ATR M A YFCSGD +++ HY LA +YTHFTSP+RR
Sbjct: 732 A--KSNDPY--FNKLIRILATRCMTQAVYFCSGDLT-FSEYYHYGLAASLYTHFTSPIRR 786
Query: 614 YPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREAL 673
Y D+VVHR L AAL K L IF D
Sbjct: 787 YADVVVHRLLAAALGIAK----------------------LPPIFQDGPQ---------- 814
Query: 674 SVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLAL 733
L +A + N R + A V+L+ I K + +EAR++ +
Sbjct: 815 --------------LTGIADNLNYRHRNAQMASRASVELHTHIYFKTRPT-DTEARIVKI 859
Query: 734 GPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVLSLCAHKRSFKRGGPGNYRALE 793
+++ K IE IY +W+ H+R K G +Y L+
Sbjct: 860 KANGFIVFVPKFGIEGPIYLTPKGDKGGDWVVDE--------VHQRVTKPGTNISYAVLQ 911
Query: 794 EVAL---VVRPN 802
V + VV P
Sbjct: 912 SVRIHMEVVEPQ 923
>gi|344275370|ref|XP_003409485.1| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Loxodonta
africana]
Length = 926
Score = 291 bits (746), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 191/547 (34%), Positives = 278/547 (50%), Gaps = 66/547 (12%)
Query: 93 QQNDGMNAIERLSAMISSYPTKR---PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG- 148
Q D M E +++ + ++ PTGRVV II R+ W Y G
Sbjct: 285 QNEDNMEREEERESILKTAVNEKMLKPTGRVVGIIRRN--------------WRPYCGML 330
Query: 149 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELV 207
S+ D K++R L TP + P++ R+E A T+E + +
Sbjct: 331 SKSDIKESRRHL---------FTPADKRIPRI-------------RIETRQASTLEGQRI 368
Query: 208 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE 267
ID W S +P H + G G+ E + +L E+ + FS LS LP +PW
Sbjct: 369 IVAIDGWPRNSRYPNGHFVKNLGDAGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWA 428
Query: 268 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 327
+ ++++ R+DLR+ C+ ++DP TD+DDAL +L +G VGVHIADVS+F+ PG A
Sbjct: 429 ITEKDMKYREDLRHLCVCSVDPPGCTDIDDALHCRQLENGNLEVGVHIADVSHFIRPGNA 488
Query: 328 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 387
LD E+ R T+VY+ +++I M+P LLS + SL VDRLAFS W++N +++
Sbjct: 489 LDQESARRGTTVYLCEKRIDMVPELLSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFT 548
Query: 388 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 447
++ I S L+Y AQ ID S T+ + D+ S++ L +++KI
Sbjct: 549 KSAINSKASLTYAEAQMRID-------STTMND------------DITTSLRGLNKLAKI 589
Query: 448 LKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
LK +R GAL L + + F D E P D + N + EEFMLLAN + A+ I
Sbjct: 590 LKKRRIEKGALTLSSPEVRFHMDSETHDPIDMQTKELRETNSMVEEFMLLANISVAKKIH 649
Query: 507 RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLF 566
F + ALLR+HPAP L++ T ++ SL++A E Y L
Sbjct: 650 EEFSEHALLRKHPAPPPSNYEILVKAAKSKNLEIKTDTAKSLADSLDKA-ESPTFPY-LN 707
Query: 567 DILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 626
+L ATR M A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A
Sbjct: 708 TLLRILATRCMMQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVA 764
Query: 627 LEAEKLY 633
+ A+ Y
Sbjct: 765 IGADSTY 771
>gi|325185200|emb|CCA19690.1| hypothetical protein SORBIDRAFT_01g048480 [Albugo laibachii Nc14]
Length = 1066
Score = 291 bits (746), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 191/526 (36%), Positives = 272/526 (51%), Gaps = 51/526 (9%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
P GRV+ I++R R GFL NQ RS+L + P
Sbjct: 394 PCGRVIGIVKRKSR--NFCGFLEPNQ------------STTRSALFL-------FIPMDR 432
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
K PK I+ + + + ++ L+ A ID W +S +P H + G+ +
Sbjct: 433 KIPK-----------IRIKTCQAETLMDQRLLVA-IDSWPVDSKYPLGHYVKTLGKINDK 480
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
E + +L + I FS E + CLP W++ E R+D R+ I +IDP D+
Sbjct: 481 ETETKVLLLTHDIASDQFSEEVMRCLPPENWKITPENSKGRRDFRHLPIVSIDPPNCKDI 540
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDAL RL +G +VGVHIADV++F+ G ALD EA R TS Y++ R++ M P LL+
Sbjct: 541 DDALHACRLPNGNYQVGVHIADVTHFIPSGNALDNEAVSRGTSTYLVDRRLDMFPSLLTT 600
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAG---DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF-- 410
++ SL D AFS+ W+L ++VD +++IRSC LSY+ AQ +D
Sbjct: 601 KLCSLTSTEDHFAFSVLWELRLTEFDVEIVDVDFCKSIIRSCASLSYQEAQIFLDDPSID 660
Query: 411 DVESSNTLGEGWPQLY-GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
D+ + L Q G F + IK+L+ ++K LK KR GAL L + + F+
Sbjct: 661 DLSKTEPLDPQRNQREGGNFPTCLIGSGIKTLHVIAKRLKTKRMEAGALTLASPEVRFVL 720
Query: 470 D-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 528
D E P D + D N L EEFMLLAN T A+ I R FP +LLRRHPAP+ R+
Sbjct: 721 DTETQNPLDVQMYALRDTNALVEEFMLLANITVAKKIVRHFPSFSLLRRHPAPSS---RQ 777
Query: 529 FEAFCSKH---GLQLDTSSSGQFHQSLEQARE---KLKDDYVLFDILIN-YATRPMQLAS 581
F+ CS+ G++L +SS Q +SL+ + + +K D L+ TR M A
Sbjct: 778 FDVLCSQAKSIGIELHVNSSKQLQESLDMSAKHSISMKKKKTHLDKLLRIMCTRCMMPAR 837
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
YF SG+ ++ HY LA P+YTHFTSP+RRY D+VVHR L AA+
Sbjct: 838 YFSSGEMT-PAEFHHYGLAAPIYTHFTSPIRRYADVVVHRLLAAAI 882
>gi|403279048|ref|XP_003931084.1| PREDICTED: exosome complex exonuclease RRP44 [Saimiri boliviensis
boliviensis]
Length = 959
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 271/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N + +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHSAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N ++ S++ L +++KILK KR GAL L + + F D E
Sbjct: 599 -SANM-------------RDNITTSLRGLNKLAKILKKKRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIYEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|123413558|ref|XP_001304301.1| RNB-like protein [Trichomonas vaginalis G3]
gi|121885743|gb|EAX91371.1| RNB-like protein [Trichomonas vaginalis G3]
Length = 863
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 201/646 (31%), Positives = 311/646 (48%), Gaps = 113/646 (17%)
Query: 116 PTGRVVSIIERSPRRDGIVGFL-----NVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL 170
PTG+VVSI+ R R I G + N W +S L VP +E +
Sbjct: 274 PTGKVVSILSRKSR--VICGTVLPPKVQTNDW--------------QSLLVVPQQENL-- 315
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
PK+ + + + + I R V ID W S +P H + G
Sbjct: 316 -------PKIRIRSRQVQELIGMR------------VHVAIDSWAINSKYPSGHYISTIG 356
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPS 290
+ G ++ + IL N I FS L+CLP ++ EE+ R DLR+ C+ +IDP
Sbjct: 357 QAGNLQAESEVILMTNEIPHDAFSDAVLNCLPPKDFQPTPEEVKRRMDLRDRCVCSIDPP 416
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
TD+DDAL + + + +GVHIADVS+FV GTA+D+EA+ R T+VY+++++I MLP
Sbjct: 417 GCTDIDDALHYKDIDEETCEIGVHIADVSFFVREGTAIDLEARDRGTTVYLVEKRIHMLP 476
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
LLSE++ S+ G++RLAFS+ +N + +D G+++I+S LSY AQ+I++ +
Sbjct: 477 SLLSEDLCSIRGGIERLAFSVVAIMNKKTAETIDVKFGKSIIKSRAALSYGRAQEIVEDQ 536
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
D S++ + I+ L +SKI+ KR DGAL L + + F
Sbjct: 537 ND-------------------QSELAKGIRGLLALSKIMNKKRMDDGALTLSSPQLHFTL 577
Query: 470 D-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 528
D E P L ++N L EEFML AN A+ I F SA+LRRH +P +
Sbjct: 578 DSETAEPLSGELYQHLEVNSLVEEFMLYANIEVAKKIYETFKQSAMLRRHESPIAARFDF 637
Query: 529 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF 588
+ G+QL+ ++ ++L+ EK+KD L +I+ TR MQ A YF +G
Sbjct: 638 LNRALKRFGVQLNPDTNKSLVETLDGVGEKVKD---LDNIVRIMTTRCMQFAKYFAAGT- 693
Query: 589 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREG 648
+ ++ HY LA P+YTHFTSP+RRY DL+VHR L AA
Sbjct: 694 QSYENFRHYGLAMPIYTHFTSPIRRYADLIVHRQLAAA---------------------- 731
Query: 649 VRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDA 708
I YDK A + L + + VA + N R ++ +
Sbjct: 732 --------IGYDK-ATDMLASKLMMQA---------------VAENLNFRHKMAQDAGRS 767
Query: 709 CVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYD 754
+L++ +L++ + E +V+ + P I +E+ +E ++ D
Sbjct: 768 SSQLFIMEMLRRTPGKIEEGKVIKIKPTVFVILLEQYGVEGHVHVD 813
>gi|356516247|ref|XP_003526807.1| PREDICTED: exosome complex exonuclease RRP44-like [Glycine max]
Length = 934
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 210/687 (30%), Positives = 327/687 (47%), Gaps = 113/687 (16%)
Query: 80 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNV 139
P+++D + S Q + E+L+A+ S RP GR+V II+R+
Sbjct: 313 PNSADDAPRAVSQQ-----GSSEQLNAVPS-----RPCGRIVGIIKRN------------ 350
Query: 140 NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGD 199
W +Y GS + + + ++ + PK+ + + L + + KR+
Sbjct: 351 --WHSY-CGSLEPMPMPAGNGGIAHALFVS---KDRRTPKIRIQTRQLENLLDKRI---- 400
Query: 200 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 259
+VA +D W+ +S +P H + G+ + + + +L EN I FS + L+
Sbjct: 401 ------IVA--VDSWDRQSRYPSGHYVRTIGKIDDRDTETEVVLIENDINTRPFSSQVLA 452
Query: 260 CLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 317
CLP +PW V E+L + RKDL + C+F++DP D+DDAL L +G VGVHIAD
Sbjct: 453 CLPPLPWVVSSEDLSNPIRKDLCHLCVFSVDPPGCKDIDDALHCHSLPNGNFEVGVHIAD 512
Query: 318 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 377
V+ FV PGT LD EA R TSVY+++R+I MLP L+E++ SL V+RLAFS+ W++
Sbjct: 513 VTNFVHPGTPLDDEAAQRGTSVYLVERRIDMLPKPLTEDICSLRSDVERLAFSVIWEMTP 572
Query: 378 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 437
D++ ++VI+S LSY AQ +D ++ +
Sbjct: 573 EADIISTRYTKSVIKSSAALSYVEAQARMDDSRLMDP-------------------ITAD 613
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLL 496
++++ ++K ++ +R GAL L +++ F D E P D + + N + EEFML
Sbjct: 614 LRNMNSLAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLA 673
Query: 497 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR 556
AN + A+ I +FP +LLRRHP P L + GL LD SSS SL+ A
Sbjct: 674 ANVSVAQQILNSFPLVSLLRRHPTPTREMLEPLLQTAAAVGLHLDVSSSKALADSLDHA- 732
Query: 557 EKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 616
+ DD ++ ATR M A YFCSGD ++ HY LA P+YTHFTSP+RRY D
Sbjct: 733 --VGDDPYFNKLIRILATRCMTQAVYFCSGDLS-PPEYHHYGLAAPLYTHFTSPIRRYAD 789
Query: 617 LVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVA 676
++VHR L A+L K L +F D+
Sbjct: 790 VIVHRLLAASLGISK----------------------LPSVFQDRLQ------------- 814
Query: 677 ALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPR 736
L ++A + N R + A V+L+ I +K+ +EAR++ +
Sbjct: 815 -----------LTSIADNLNYRHRNAQYAGRASVELHTLIYFRKRPT-DTEARIVKIRSN 862
Query: 737 FMTIYIEKLAIERRIYYDEVEGLIVEW 763
+++ K IE +Y + E EW
Sbjct: 863 GFFVFVPKYGIEGPVYLTKAEKGSGEW 889
>gi|114650043|ref|XP_509678.2| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Pan
troglodytes]
gi|397514450|ref|XP_003827499.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Pan
paniscus]
gi|410219622|gb|JAA07030.1| DIS3 mitotic control homolog [Pan troglodytes]
gi|410257840|gb|JAA16887.1| DIS3 mitotic control homolog [Pan troglodytes]
gi|410299634|gb|JAA28417.1| DIS3 mitotic control homolog [Pan troglodytes]
gi|410349373|gb|JAA41290.1| DIS3 mitotic control homolog [Pan troglodytes]
Length = 958
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|290982053|ref|XP_002673745.1| predicted protein [Naegleria gruberi]
gi|284087331|gb|EFC41001.1| predicted protein [Naegleria gruberi]
Length = 815
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 188/528 (35%), Positives = 279/528 (52%), Gaps = 38/528 (7%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PTGRVV+I E+S +RD VGFL SR++ +++ ++ P
Sbjct: 179 QPTGRVVAIKEKSKKRD-FVGFLTT---------SRENGVIDQAD------QHCIFIPLD 222
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ P+MVV + P+S K G MEL + WNE+S P ++ GR G
Sbjct: 223 KRCPRMVVPLSQCPESFKTN-PNGHG---MELYVVQFVTWNEKSTLPYGKLIKHLGRAGN 278
Query: 235 VEPQINAILYENAICCSGFSPE-------SLSCLPCVPWEVPQEELLSRKDLRNFCIFTI 287
+E + +I+ + + S ++ + L+ W +P EEL RKD R +FTI
Sbjct: 279 LETDLESIIIDFEVDTSSYTEKVIDEIKSDLNIQSTNDWTIPVEELEKRKDARGERVFTI 338
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP A DLDDA+SI +L+D + RVG+HIAD SYFV G+ LD AQ R+TSVY+ +P
Sbjct: 339 DPKHAKDLDDAISISKLNDNLFRVGIHIADASYFVAAGSKLDRIAQRRATSVYLEHLIVP 398
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWIGRTVIRSCCKLSYEHAQD 404
MLP LS+++ SL P DRLAFSI+ L++ G++V + ++V+RSC KLSYE AQ
Sbjct: 399 MLPHFLSDDICSLLPSKDRLAFSIYVLLDANGELVKDQESVFQKSVVRSCAKLSYEIAQQ 458
Query: 405 IIDG--KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
+I G K D E S + ++ +V I L++++ ++ R G L L
Sbjct: 459 VIGGEIKSDSEISQDICPREGDIFCPNLGGSLVEDITMLHKLAMKRRESRLESGTLSLNK 518
Query: 463 SKPVFLFDEYGTPYDSV-LSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
+ E S+ + ++ N + EE MLLAN AAE + ++ D+ LLR H +P
Sbjct: 519 PRIQLELSEDNQSVKSINVKEEKESNNMIEELMLLANYLAAEKLLKSSNDTVLLRSHGSP 578
Query: 522 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 581
+K+ +F FC+ L ++ S+ + SL D + ++ AT+ MQ A
Sbjct: 579 LEKKMSDFIDFCNSAKLDINVESAAELDNSLRSIT-----DTEVSAVVNLEATKAMQTAK 633
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
YF D + HYAL P YTHFTSP+RRY D++VHR L +AL A
Sbjct: 634 YFAYSDKNNCLSTHHYALNVPYYTHFTSPIRRYSDIIVHRQLESALFA 681
>gi|426375656|ref|XP_004054641.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Gorilla
gorilla gorilla]
Length = 958
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|395527441|ref|XP_003765855.1| PREDICTED: exosome complex exonuclease RRP44 [Sarcophilus harrisii]
Length = 959
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/523 (36%), Positives = 270/523 (51%), Gaps = 65/523 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+P+GRVV II+R+ R G L S+ D K++R L TP
Sbjct: 341 KPSGRVVGIIKRNWR--PFCGML-----------SKSDIKESRRHL---------FTPAD 378
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ P++ R+E A T+E + + ID W + S +P H + G G
Sbjct: 379 KRIPRI-------------RIETRQASTLEGQRIIVAIDGWPKNSRYPNGHFVKNLGAVG 425
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ E + +L E+ + FS LS LP +PW + +E++ +R+DLR+ C+ ++DP T
Sbjct: 426 DKETETEVLLLEHDVPHQPFSQSVLSFLPKMPWSITEEDMKNREDLRHLCVCSVDPPKCT 485
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P LL
Sbjct: 486 DIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESAKRGTTVYLCEKRIDMVPELL 545
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 546 SSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLTYAEAQMRID------ 599
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
S T+ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 600 -SATMND------------DITTSLRGLNKLAKILKRRRIDAGALILSSPEVRFHVDSET 646
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 647 HDPIDLQTKELRETNSMVEEFMLLANVSVAKKIHEEFSEHALLRKHPAPPPSNYEVLIKA 706
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV--LFDILINYATRPMQLASYFCSGDFKD 590
L T S+ SL+Q E Y+ LF IL ATR M A YFCSG
Sbjct: 707 AKSKNLDFKTDSAKALADSLDQV-ESPNFPYLNTLFRIL---ATRCMMQAVYFCSG---M 759
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTY 802
>gi|348583824|ref|XP_003477672.1| PREDICTED: exosome complex exonuclease RRP44-like [Cavia porcellus]
Length = 958
Score = 291 bits (744), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 268/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA-KKNRSSLSVPDREYIQLTPT 173
RPTGRVV II+R+ W Y G K A K++R L TP
Sbjct: 340 RPTGRVVGIIKRN--------------WRPYCGMLSKSAIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + + ++ +R+DLR+ C+ ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITENDMKNREDLRHLCVCSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELKNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S T+ + D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 599 --SATMND------------DITTSLRGLNKLAKILKKGRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEVLVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ SL++A E L Y L +L ATR M A YFCSG D
Sbjct: 705 AAKSKNLEIKTDTARSLADSLDRA-ESLAFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|340507482|gb|EGR33437.1| rnb family protein, putative [Ichthyophthirius multifiliis]
Length = 947
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 183/520 (35%), Positives = 271/520 (52%), Gaps = 57/520 (10%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI-QLTPTH 174
P G+V II+R R G +N +N L++ + +I + P
Sbjct: 341 PQGKVKGIIKRVQR--FFCGQIN---------------NENIDQLNISNNIFIREFIPVD 383
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+YP + + + KR++ D W + S +P H + G G+
Sbjct: 384 SRYPNFYIKTTNPQNLEDKRIQ------------IVFDNWPKNSKYPFGHFKMLIGPSGD 431
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPC--VPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
+ + + IL E+ + FS + L CLP W++PQ E R DLR+ + +IDP
Sbjct: 432 IHTEGDVILLEHGVEYRQFSKQVLDCLPQEGSNWKIPQSEFSKRVDLRHLKVCSIDPIGC 491
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D+DDAL +L G VGVHIADVS+FV + +D EAQ R T+VY++ R+ MLP L
Sbjct: 492 KDIDDALHCIKLPSGNYEVGVHIADVSHFVKANSPIDKEAQNRCTTVYLVDRRTDMLPKL 551
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
L+E + SL +RL+FS+ W+++ G+++ ++VI S L+Y+ AQ++ID K D
Sbjct: 552 LTETLCSLKDDGERLSFSVVWEIDPEGNIIQTRYHKSVIHSVASLNYQQAQNMIDNKND- 610
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF-DE 471
NT ++ SI+ L ++K LK KR +GAL L +++ F F DE
Sbjct: 611 ---NT---------------ELTNSIRYLNLLAKKLKAKRIQNGALSLASTQVKFSFDDE 652
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D D N L EEFMLLAN + A+ I FP ++LR+H P ++++E +
Sbjct: 653 THNPIDVSFYQMYDTNSLIEEFMLLANVSVAQKIIDHFPSISILRQHQQPKQKQIKELAS 712
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
SK G LD SS+ SL+Q +D+ F+ LI TR M A Y C+ D D
Sbjct: 713 ILSKIGYNLDFSSNKNLAHSLDQIN---RDNDSFFNKLIRIMTTRAMNEAVYLCTAD-AD 768
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
TD+ HY LA P+YTHFTSP+RRY D++VHR L AA++ E
Sbjct: 769 YTDFYHYGLAAPLYTHFTSPIRRYADILVHRLLAAAIDLE 808
>gi|332216686|ref|XP_003257481.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Nomascus
leucogenys]
Length = 958
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 271/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W+++ +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMSHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S+++L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRALNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|224043479|ref|XP_002197213.1| PREDICTED: exosome complex exonuclease RRP44 [Taeniopygia guttata]
Length = 964
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 187/521 (35%), Positives = 269/521 (51%), Gaps = 61/521 (11%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
RPTGRVV II+R+ W Y G S+ K+ R L TP
Sbjct: 345 RPTGRVVGIIKRN--------------WRPYCGMLSKSQIKEARRHL---------FTPA 381
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ P+ I+ + DA +E + + ID W S +P H + G G
Sbjct: 382 DRRIPR-----------IRIETRQADA-LEGQRIIVAIDGWPRNSRYPNGHFVKNLGSAG 429
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ E + +L E+ + FS LS LP +PW + +E++ R+DLR+ + ++DP T
Sbjct: 430 DKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEEDMKHREDLRHLNVCSVDPPGCT 489
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL + +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P LL
Sbjct: 490 DIDDALHCREIGNGNLEVGVHIADVSHFIRPGNALDEESVKRGTTVYLCEKRIDMVPELL 549
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL VDRLAFS W++N +++ +++I S L+Y AQ ID
Sbjct: 550 SSNLCSLRSNVDRLAFSCIWEMNHKAEILKTRFTKSIINSRASLTYAEAQMRID------ 603
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
S T+ + D+ S++ L +++KILK KR +GAL L + + F D E
Sbjct: 604 -SATMND------------DITTSLRGLNKLAKILKKKRIDNGALTLASPEVRFHMDSET 650
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P D ++ N + EEFMLLAN + A+ I FP+ ALLR+HPAP
Sbjct: 651 HDPIDLQTKELKETNSMVEEFMLLANISVAQKIYDEFPEFALLRKHPAPPPSNYDILVKA 710
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDT 592
L++ T S+ +SL++A E Y L +L TR M A YFCSG D
Sbjct: 711 AKSKNLEIKTDSAKALAESLDKA-ESPTFPY-LNTLLRILTTRCMMQAVYFCSG---MDN 765
Query: 593 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 766 DFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTY 806
>gi|156544750|ref|XP_001605998.1| PREDICTED: DIS3-like exonuclease 2-like [Nasonia vitripennis]
Length = 961
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 182/527 (34%), Positives = 280/527 (53%), Gaps = 47/527 (8%)
Query: 117 TGRVVSIIERS-PRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
TG V+SI+E++ PR+ VG+L F + L P
Sbjct: 332 TGTVLSILEKAHPRK--AVGYLKKQDVFVF------------------------LQPRDS 365
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ P++ + P ++ K + + L I +W + + F + ++ + G G++
Sbjct: 366 RVPQLRIN----PKTVPKHFYDNPDQFKETLFLCDIVDWKKVA-FAEGEIVQIVGSKGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
+ AIL EN + + + E L LP + + +L R+DLR CIFTIDP+TA DL
Sbjct: 421 SVETKAILLENDLILTPYEDELLQDLPPSDYIPTEADLADREDLRETCIFTIDPATAVDL 480
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDA+S + L +G VG+HIADV++F+ + LD + R+T+VYM+ MLP L
Sbjct: 481 DDAMSCKLLENGNFEVGIHIADVTHFLEAFSPLDKKVAERATTVYMVDNVYHMLPKQLCL 540
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
SL PG D+LAFS+ ++ + ++V +TVI SCC+++Y AQ +ID ES
Sbjct: 541 AC-SLLPGQDKLAFSVILEMTPSAEIVSSRFAKTVINSCCQMAYGQAQIMIDD----ESY 595
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGT 474
+ +G + G ++ SD+V+ +++LY +S LK KRF +GALR++ K VFL +
Sbjct: 596 DWEKDGSLTIAGNYKPSDLVKVVRNLYNISMELKRKRFDEGALRIDQPKLIVFLDKDTRL 655
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P L R + N L EEFMLLAN T A+ + P+ +LLR HP P+MR L++
Sbjct: 656 PSSYKLEERIESNSLIEEFMLLANMTVAKYLYETLPEVSLLRSHPEPSMRILQKTRNLLK 715
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKD-------DYVLFDILI--NYATRPMQLASYFCS 585
K G+ LD S+G H++L + + L D D +++++ + + M A Y CS
Sbjct: 716 KFGVHLDVESAGTLHKTLSKYQVNLNDSGNDGSLDVAYYNMMVINSLCAKSMTRAVYKCS 775
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
K HYAL YTHFTSP+RRYPD VVHR L A+++ + L
Sbjct: 776 ASVKTKEALRHYALNAEYYTHFTSPIRRYPDCVVHRLLYASIKNQPL 822
>gi|426375658|ref|XP_004054642.1| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Gorilla
gorilla gorilla]
Length = 928
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 393
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 394 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 453
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 514 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 568
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 569 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 675 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 729
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 771
>gi|410047814|ref|XP_003952453.1| PREDICTED: exosome complex exonuclease RRP44 [Pan troglodytes]
Length = 928
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 209/644 (32%), Positives = 306/644 (47%), Gaps = 109/644 (16%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 393
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 394 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 453
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 514 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 568
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 569 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 675 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 729
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRG 651
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY------------------ 771
Query: 652 RFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVK 711
L + L ADI N+ N R + + A V
Sbjct: 772 -------------PELTDKHKL-----------ADICKNL----NFRHKMAQYAQRASVA 803
Query: 712 LYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDE 755
+ + K K ++ EA +L + + + I K +E ++++E
Sbjct: 804 FHTQLFFKSKGIVSEEAYILFVRKNAIVVLIPKYGLEGTVFFEE 847
>gi|109120931|ref|XP_001083933.1| PREDICTED: exosome complex exonuclease RRP44-like isoform 4 [Macaca
mulatta]
Length = 948
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 330 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 366
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 367 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 413
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 414 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 473
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 474 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 533
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 534 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 588
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 589 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 634
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 635 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 694
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 695 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 749
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 750 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAVGADSTY 791
>gi|383411071|gb|AFH28749.1| exosome complex exonuclease RRP44 isoform a [Macaca mulatta]
gi|387541500|gb|AFJ71377.1| exosome complex exonuclease RRP44 isoform a [Macaca mulatta]
Length = 958
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAVGADCTY 801
>gi|343959206|dbj|BAK63458.1| exosome complex exonuclease RRP44 [Pan troglodytes]
Length = 630
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 12 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 48
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 49 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 95
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 96 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 155
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 156 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 215
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ +
Sbjct: 216 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQ------LRI 269
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
+S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 270 DSANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 316
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 317 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 376
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 377 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 431
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 432 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 473
>gi|402874631|ref|XP_003901136.1| PREDICTED: DIS3-like exonuclease 1 [Papio anubis]
Length = 1054
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 207/657 (31%), Positives = 329/657 (50%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +EE RKDLR + +F+IDP
Sbjct: 421 EGEIATILVENSISVIPFSEAQMCEMPVNTPENPWKVSREEEQKRKDLRKSHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LSI L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSIRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A SI W+L+ ++ + W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SVLSADLCSLLGGVDRYAVSIMWELDKTSYEIKEVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M K N
Sbjct: 779 EE-EFHHYGLALDTYTHFTSPIRRYSDIVVHRLLMAAISKDK------KMEIKGN----- 826
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 827 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 854
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 855 TELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDGLVI 911
>gi|301093561|ref|XP_002997626.1| exosome complex exonuclease RRP44, putative [Phytophthora infestans
T30-4]
gi|262110016|gb|EEY68068.1| exosome complex exonuclease RRP44, putative [Phytophthora infestans
T30-4]
Length = 1079
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 202/548 (36%), Positives = 282/548 (51%), Gaps = 82/548 (14%)
Query: 115 RPTGRVVSIIERSPR---------RDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP-D 164
+P GRVV II+R+ R RDG+ N G S L VP D
Sbjct: 410 KPAGRVVGIIQRNWRKFCCSLEAPRDGVT--------LNASG----------SCLVVPVD 451
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
R K PK IK + + +A ++ ++ A ID W S FP H
Sbjct: 452 R----------KVPK-----------IKIQTRQQEALMDKRVLVA-IDSWPAYSKFPLGH 489
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCI 284
+ G G+ E + +L E+ I C FS E + CLP W++ E R+DLR+ +
Sbjct: 490 YVRTLGVIGDKETETTVLLLEHDIPCDQFSDEVMRCLPAEDWKITPENASGRRDLRDLPV 549
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL + L +G +VGVHIADV++FV PG+ALD EA R TS Y++ R
Sbjct: 550 CSIDPPNCKDIDDALHAKLLPNGNLQVGVHIADVTHFVAPGSALDEEAADRGTSTYLVDR 609
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG----DVVDRWIGRTVIRSCCKLSYE 400
++ MLP LL+ ++ SL D AFS+ W+L G VVD +++IRS LSY+
Sbjct: 610 RLDMLPGLLTTKLCSLTDVEDHFAFSVLWELQLVGQSDVQVVDVQFCKSLIRSVASLSYQ 669
Query: 401 HAQDIIDGKFDVESSNTLGEGWP-------QLYGQFEWSDVVRS-IKSLYEVSKILKDKR 452
AQ+ +D D E+ G+ + QFE ++ S IK+L ++ L+ KR
Sbjct: 670 QAQEFLD---DPEAGGVYGQDSTLKKKKKGESDEQFERRQLLGSGIKTLNTIATRLRAKR 726
Query: 453 FTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 511
GAL L + + F+ D E P D + D N L EEFMLLAN T A+ I R FP
Sbjct: 727 IEAGALTLASPEVRFVLDTETQNPLDVQMYTLRDTNALVEEFMLLANITVAKKIVRHFPT 786
Query: 512 SALLRRHPAPNMRKLREFEAFCSKH---GLQLDTSSSGQFHQSLEQAREKL--------- 559
++LRRHPAP+ R+F+ CS+ G++L +S Q SL+ A ++
Sbjct: 787 FSMLRRHPAPSK---RQFDLLCSQAKAVGVELHVDTSKQLQDSLDAADKEAAGSKRKHGD 843
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
K + +L TR M ASYF SG+ ++ HY LA P+YTHFTSP+RRY D+VV
Sbjct: 844 KANPYFNKLLRIMTTRCMMPASYFSSGEVA-PPEFHHYGLAAPIYTHFTSPIRRYADVVV 902
Query: 620 HRTLNAAL 627
HR L AA+
Sbjct: 903 HRLLAAAI 910
>gi|397514452|ref|XP_003827500.1| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Pan
paniscus]
gi|410219620|gb|JAA07029.1| DIS3 mitotic control homolog [Pan troglodytes]
gi|410257838|gb|JAA16886.1| DIS3 mitotic control homolog [Pan troglodytes]
gi|410299632|gb|JAA28416.1| DIS3 mitotic control homolog [Pan troglodytes]
gi|410349371|gb|JAA41289.1| DIS3 mitotic control homolog [Pan troglodytes]
Length = 928
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 393
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 394 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 453
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 514 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 568
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 569 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 675 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 729
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 771
>gi|332216688|ref|XP_003257482.1| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Nomascus
leucogenys]
Length = 928
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 271/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 393
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 394 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 453
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W+++ +++ ++VI S L+Y AQ ID
Sbjct: 514 LSSNLCSLKCDVDRLAFSCIWEMSHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 568
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S+++L +++KILK +R GAL L + + F D E
Sbjct: 569 -SANM-------------NDDITTSLRALNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL+QA E Y L +L ATR M A YFCSG D
Sbjct: 675 AARSRNLEIKTDTAKSLAESLDQA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 729
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 771
>gi|355754731|gb|EHH58632.1| Exosome complex exonuclease RRP44 [Macaca fascicularis]
Length = 958
Score = 290 bits (742), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 377 EKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDRA-ESPAFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAVGADCTY 801
>gi|109120929|ref|XP_001084036.1| PREDICTED: exosome complex exonuclease RRP44-like isoform 5 [Macaca
mulatta]
Length = 928
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 393
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 394 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 453
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 514 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 568
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 569 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 675 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 729
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAVGADSTY 771
>gi|449280298|gb|EMC87625.1| Exosome complex exonuclease RRP44, partial [Columba livia]
Length = 896
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 191/533 (35%), Positives = 278/533 (52%), Gaps = 73/533 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RPTGRVV II+R+ R G L S+ K+ R L TP
Sbjct: 264 RPTGRVVGIIKRNWR--PFCGML-----------SKSQIKEARRHL---------FTPAD 301
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ P++ R+E A T+E + + ID W S +P H + G G
Sbjct: 302 RRIPRI-------------RIETRQADTLEGQRIIVAIDGWPRNSRYPNGHFVKNLGSAG 348
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ E + +L E+ + FS LS LP +PW + ++++ R+DLR+ C+ ++DP T
Sbjct: 349 DKETETEVLLLEHDVPHQPFSQSVLSFLPQMPWSITEQDMKYREDLRHLCVCSVDPPGCT 408
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL + +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P LL
Sbjct: 409 DIDDALHCREVENGNIEVGVHIADVSHFIRPGNALDEESAKRGTTVYLCEKRIDMVPELL 468
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL VDRLAFS W++N +++ +++I S L+Y AQ ID
Sbjct: 469 SSNLCSLRSNVDRLAFSCIWEMNHKAEILKTRFTKSIINSKASLTYAEAQMRID------ 522
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
S T+ + D+ S++ L +++KILK +R +GAL L + + F D E
Sbjct: 523 -SATMND------------DITISLRGLNKLAKILKKRRIDNGALVLSSPEVRFHMDSET 569
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN------MRKL 526
P D ++ N + EEFMLLAN + A+ I FP+ ALLR+HPAP + K
Sbjct: 570 HDPIDLQTKELKETNSMVEEFMLLANVSVAQKIYDEFPEFALLRKHPAPPPSNYDILVKA 629
Query: 527 REFEA------FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLA 580
+ +A F L++ T S+ +SL++A E Y L +L ATR M A
Sbjct: 630 AKSQAIIPDFLFLPPQNLEIKTDSAKALAESLDKA-ESPAFPY-LNTLLRIMATRCMMQA 687
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 688 VYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTY 737
>gi|343961723|dbj|BAK62451.1| exosome complex exonuclease RRP44 [Pan troglodytes]
Length = 621
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 3 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 39
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 40 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 86
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 87 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 146
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 147 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 206
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ +
Sbjct: 207 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQ------LRI 260
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
+S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 261 DSANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 307
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 308 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 367
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 368 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 422
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 423 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 464
>gi|355692812|gb|EHH27415.1| hypothetical protein EGK_17608 [Macaca mulatta]
Length = 971
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 207/657 (31%), Positives = 328/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KTAQK------------ILVTPWDY 289
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 290 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 337
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +EE RKDLR + +F+IDP
Sbjct: 338 EGEIATILVENSISVIPFSEAQMCEMPVNTPENPWKVSREEEQKRKDLRKSHLVFSIDPK 397
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LSI L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSIRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 457
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A SI W+L+ ++ + W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SVLSADLCSLLGGVDRYAVSIMWELDKTSYEIKEVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 518 FSVVDDIPEFKDLDEKSKQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 577
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 578 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 637
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 695
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M K N
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK------KMEIKGN----- 743
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 744 -------LFTNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 771
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 772 TELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDGLVI 828
>gi|403377456|gb|EJY88725.1| RNB-like protein [Oxytricha trifallax]
Length = 1041
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 190/540 (35%), Positives = 286/540 (52%), Gaps = 45/540 (8%)
Query: 98 MNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNR 157
+N IE+ I++ KR T RV ++++ + G + +Q +R+ +
Sbjct: 370 LNLIEK----INNEKQKRVTARVRGVLKKMNKTYGGSIIKSSDQ----TEETRRKFELFL 421
Query: 158 SSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEE 217
+L V ++Y KY V +P +I K +E + R W +
Sbjct: 422 KNLRVEQKDYF-------KYRVFVPFNLQMPQAIVKSARP--EALENKRFILRFSTWTKY 472
Query: 218 SPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC--VPWEVPQEELLS 275
SPFPQ + + G G ++ + IL+E + FS + L CLP W++PQEE+
Sbjct: 473 SPFPQGQFVKIIGEEGSIKTEGEMILHEFNVDTRPFSNKVLQCLPTDGANWKIPQEEIDK 532
Query: 276 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 335
R D+R+ + ++DP D+DDAL L +G VGVHIADV++FV G+ +D EA R
Sbjct: 533 RLDIRHLIVASVDPIGCKDIDDALHCRILPNGNYEVGVHIADVTHFVKAGSEIDKEAARR 592
Query: 336 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV-VDRWIGRTVIRSC 394
T+VYM+ R+ MLP LL+E + S+ G +RL FS+ W+++S V ++VI+S
Sbjct: 593 CTTVYMVDRRTDMLPGLLTENLCSIRGGTERLVFSVIWEIDSKKFTPVKSSFHKSVIKSA 652
Query: 395 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 454
L Y AQD+I+ D + L E S++ L +++IL+D+R
Sbjct: 653 AALDYYTAQDMIN---DPNNKTELTE----------------SLRRLLTIARILRDRRTA 693
Query: 455 DGALRLENSKPVF-LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA 513
GAL L + + F L D TP D D +F+ EEFMLLAN AE I + +P A
Sbjct: 694 KGALTLASPELKFKLDDNRETPTDVTEYRHVDTHFMIEEFMLLANIAVAEKIVQHYPSFA 753
Query: 514 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-Y 572
+LRRHP P +++ EF +K+G ++ SS F SL++A E+ D Y F+ ++
Sbjct: 754 ILRRHPQPKQKEVAEFVDQLAKYGFEMALDSSKSFADSLDRA-ERPNDPY--FNKIVRIM 810
Query: 573 ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
ATR M A YFC DF D ++ HY LA PVYTHFTSP+RRY D++VHR L AA++ + L
Sbjct: 811 ATRCMHQAVYFCLADF-DISEVFHYGLAVPVYTHFTSPIRRYADVLVHRLLAAAIDIQSL 869
>gi|431895894|gb|ELK05312.1| DIS3-like exonuclease 1 [Pteropus alecto]
Length = 1054
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 204/657 (31%), Positives = 327/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V G+ G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGKIGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I + FS + +P PW+V EE RKDLR +F+IDP
Sbjct: 421 EGEIATILVENSISVAPFSEAQMCEMPVNTPENPWKVSPEEERERKDLRKTHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ LS+G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLSNGDLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL G+DR A S+ W+L+ + ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGIDRYAVSVMWELDKTTYEIKKVWYGRTIIRSSYKLFYEAAQELLDGN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F++ + Q + D+V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FNIIDDIPEFRDLDEKSRQAKLEDLVWAIGKLTDIARHVRAKRDRCGALELEGVEVRVQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE D + +++ EFM+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DEKKNIQDLIPKQPLEVHETVAEFMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + A + M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNAND--PSDPIVNRLLRSMAAQAMSNALYFSTGSCA 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K +M K N
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDK------KMEIKEN----- 826
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 827 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 854
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 855 TELFQCMYFKDKDQETEERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDGLVI 911
>gi|355778118|gb|EHH63154.1| hypothetical protein EGM_16066 [Macaca fascicularis]
Length = 971
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 207/657 (31%), Positives = 328/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KTAQK------------ILVTPWDY 289
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 290 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 337
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +EE RKDLR + +F+IDP
Sbjct: 338 EGEIATILVENSISVIPFSEAQMCEMPVNTPENPWKVSREEEQKRKDLRKSHLVFSIDPK 397
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LSI L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSIRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 457
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A SI W+L+ ++ + W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SVLSADLCSLLGGVDRYAVSIMWELDKTSYEIKEVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 518 FSVVHDIPEFKDLDEKSKQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 577
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 578 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 637
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 695
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M K N
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK------KMEIKGN----- 743
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 744 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 771
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 772 TELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDGLVI 828
>gi|355701030|gb|EHH29051.1| Exosome complex exonuclease RRP44 [Macaca mulatta]
Length = 958
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 270/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 377 EKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAVGADCTY 801
>gi|167519679|ref|XP_001744179.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777265|gb|EDQ90882.1| predicted protein [Monosiga brevicollis MX1]
Length = 951
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 172/444 (38%), Positives = 243/444 (54%), Gaps = 24/444 (5%)
Query: 191 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 250
I+ R ++ D + ++V A +D W S +P H++ V G G+V + +L E+A+
Sbjct: 365 IRFRSQQPDKLVGQQIVLA-VDGWPTNSKYPIGHLVRVLGPIGDVNTETEVVLLEHAVPF 423
Query: 251 SGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISR 310
FS L CLP W +++L R+DLR+ + +IDP TD+DDAL + L +G
Sbjct: 424 EPFSKAVLDCLPDATWLAAEQDLSRREDLRHLEVCSIDPPGCTDIDDALHLRDLPNGHFE 483
Query: 311 VGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFS 370
VGVHIADVS+F+ P TALD EA R T+VY+ R+I M+P LLS + SL G +R AFS
Sbjct: 484 VGVHIADVSHFIKPNTALDQEAAKRGTTVYLSNRRIDMVPGLLSSNLCSLRGGEERFAFS 543
Query: 371 IFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFE 430
W++ D++ +++IRS L Y AQ ID + D Q
Sbjct: 544 CIWEMTDQADIISTRFCKSIIRSRAALEYSEAQARIDDETD----------------QTT 587
Query: 431 WSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFL 489
+D +R + +L +KI+K +R GAL L + + F D E P D + D N L
Sbjct: 588 LTDSIRRLNAL---AKIVKRRRIEAGALMLASPEVRFRIDTETHDPVDVQMKQLHDTNSL 644
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFH 549
EEFMLLAN ++A I + FP A+LRRHPAP G+ L T+SS +
Sbjct: 645 VEEFMLLANVSSAREIHKQFPTCAVLRRHPAPPPSNFEPLLKAAEAAGVTLSTTSSKELA 704
Query: 550 QSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
SL+ A+ + + + +L ATR M A YFCSG T++GHY LA P+YTHFTS
Sbjct: 705 VSLDMAQPEGQP--YMNTLLRILATRCMLPAQYFCSGTVP-QTEFGHYGLASPIYTHFTS 761
Query: 610 PLRRYPDLVVHRTLNAALEAEKLY 633
P+RRY DL+VHR L A + A+ Y
Sbjct: 762 PIRRYADLLVHRLLAACIGADPTY 785
>gi|241693025|ref|XP_002412965.1| salivary protein Is3, putative [Ixodes scapularis]
gi|215506779|gb|EEC16273.1| salivary protein Is3, putative [Ixodes scapularis]
Length = 956
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 265/522 (50%), Gaps = 59/522 (11%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
K PTGR+V I+ R R + + Q N K +R P
Sbjct: 334 KVPTGRIVGILRRKWR-----PYCGILQPSNIKEATRH-----------------LFVPA 371
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ PK I+ + D +V + ID W +S +PQ H++ G G
Sbjct: 372 ERRIPK-----------IRIETRQADVLCRQRIVVS-IDSWPRDSRYPQGHLVKALGEVG 419
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ + +L E+ I FS L CLP +PW + +E +R+DLR+ CI ++DP T
Sbjct: 420 DRATENQVLLLEHDIPHQCFSRSVLDCLPSLPWTIGPKEEKNREDLRHLCICSVDPPGCT 479
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL L +G VGVHIADVSYFV PGTALD EA R T+VY++ ++I M+P LL
Sbjct: 480 DIDDALHCRELPNGNYEVGVHIADVSYFVRPGTALDKEAANRGTTVYLVDQRIDMVPELL 539
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL G +RLAFS W+++ +V+ +++I+S L+Y AQ ID D
Sbjct: 540 SANLCSLRGGEERLAFSAIWEVSPEAEVLHTKFHKSIIKSRAALTYAEAQARID---DTS 596
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
++ L G ++ L ++KILK KR +GAL L +S+ F D E
Sbjct: 597 LNDELTLG----------------LRGLNRLAKILKAKRIANGALTLASSEVRFHVDSET 640
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P D + N + EEFMLLAN + A I + FP+ ALLRRHPAP L
Sbjct: 641 HDPIDVQTKQLLETNSMVEEFMLLANASVARHIFQEFPECALLRRHPAPAPANLEPLVKA 700
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY-ATRPMQLASYFCSGDFKDD 591
G ++ S + +SL++A + + F++++ ATR M A YFCSG +
Sbjct: 701 GHSKGFVVEVESGLRLAESLDRA---VDPEQPYFNVMLRMVATRCMARALYFCSGCVAPE 757
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P YTHFTSP+RRY DL+VHR L + AE Y
Sbjct: 758 -DFDHYGLAMPFYTHFTSPIRRYSDLMVHRLLGVCVGAEATY 798
>gi|326664018|ref|XP_001336850.2| PREDICTED: exosome complex exonuclease RRP44 [Danio rerio]
Length = 950
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 187/533 (35%), Positives = 274/533 (51%), Gaps = 61/533 (11%)
Query: 103 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSV 162
+L ++ S +PTGRVV II+R+ R G L +Q K+A ++
Sbjct: 325 KLKSVASESSVLKPTGRVVGIIKRNWR--PFCGMLAQSQI--------KEATRH------ 368
Query: 163 PDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQ 222
TP + P++ + + I +R+ +VA ID W + S +P
Sbjct: 369 ------LFTPADRRIPRIRIETRQAATLIGQRI----------MVA--IDGWPKNSRYPN 410
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNF 282
H + G G+ E + +L E+ + FS LS LP +PW + +E+L R DLR+
Sbjct: 411 GHFVKNLGTAGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWGITEEDLKVRADLRHL 470
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
C+ ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+VY+
Sbjct: 471 CVCSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQEAANRGTTVYLC 530
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
++I M+P LLS + SL V+RLAFS W++N +++ ++VI S L+Y A
Sbjct: 531 GKRIDMVPELLSSNLCSLRSNVERLAFSCIWEMNHKAEIIKTHFTKSVINSKASLTYAEA 590
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
Q ID T+ + D+ +S++ L +++KILK +R GAL L +
Sbjct: 591 QMRID-------DTTMND------------DITKSLRGLNKLAKILKAQRIDKGALTLSS 631
Query: 463 SKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
+ F D E P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 632 PEVRFHIDSETHDPIDLQTKELMETNSMVEEFMLLANISVAQKIYDEFSECALLRKHPAP 691
Query: 522 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLA 580
L++ T S+ SL A +++ F+ L+ ATR M A
Sbjct: 692 PPSNYDILIKAAKSRDLEIHTDSAKALADSLNNA---TIENFAYFNTLLRILATRCMMQA 748
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
YFCSG D+D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 749 VYFCSG---MDSDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAINADSTY 798
>gi|242021768|ref|XP_002431315.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516583|gb|EEB18577.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 753
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 177/609 (29%), Positives = 300/609 (49%), Gaps = 60/609 (9%)
Query: 150 RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAA 209
++ A S+++ Y+ P ++P++ + + P + E+ + +L A
Sbjct: 143 KRQAIGTLSTVTNKKVNYVIFCPRDMRFPRLKIKKSNCPSEFIQNPEKFNN----KLFLA 198
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP 269
++ +WN+ F ++ G G ++ + NAI+ + + +P +
Sbjct: 199 KLSQWNDLQ-FADGELIEEVGTVGNIQAETNAIILGLGLKIPSYDENLKKYIPSNSMTMT 257
Query: 270 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 329
+EE+L R+D R C+FTIDP+TA DLDDA+S + LS+G +GVHI+DVS+++ T LD
Sbjct: 258 EEEILKREDFRKECVFTIDPATAVDLDDAVSCKELSNGNYEIGVHISDVSFYLKESTPLD 317
Query: 330 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 389
+ ++TSVY + + MLP L + SL PG D+L+FS+ W++ ++ +T
Sbjct: 318 LAVSQQATSVYFVDKVYHMLPYELC-RLCSLTPGEDKLSFSVLWEVTPDCQILRHRFAKT 376
Query: 390 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 449
VI SC + SYE Q II+ SSNT+ P+L+G + + IK L+E + L+
Sbjct: 377 VINSCAQFSYEQVQSIIND----SSSNTV--NLPKLHGSHKNIAIRNIIKKLFEFAFHLR 430
Query: 450 DKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 509
KRF +GALR++ K VF D P++ ++ ++L EE MLLAN T AE + +
Sbjct: 431 KKRFDNGALRIDRKKIVFCLDANLMPHEYRAEIHDESHYLIEELMLLANITVAEKLIEQY 490
Query: 510 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 569
P+ A LR H P + L++ + + L LD +++G + L + +L
Sbjct: 491 PNIAFLRSHSPPVVFALQKLQKNLENYNLYLDITNAGSINNFLLKCSGSDSKSVARMLVL 550
Query: 570 INYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
N +PM A+Y+CSG+F +D + HYAL P+YTHFTSP+RRY D++VHR +++ + A
Sbjct: 551 NNLLAKPMTRATYYCSGNFSNDDERRHYALNVPLYTHFTSPIRRYADIMVHRLMSSYVNA 610
Query: 630 EKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILV 689
P+ + KD +S
Sbjct: 611 TN--------APQ----------------WSKDHVQS----------------------- 623
Query: 690 NVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIER 749
+A CN +K A + + +L+ I + K L+ EA V + + I +
Sbjct: 624 -IANQCNKQKYAAKLAGEMSAELFFSIYIDLKGSLICEAVVCDIKDKSFDCIILSTGTHQ 682
Query: 750 RIYYDEVEG 758
R+Y++ ++G
Sbjct: 683 RVYFERIKG 691
>gi|302565360|ref|NP_001181400.1| DIS3-like exonuclease 1 [Macaca mulatta]
gi|380788789|gb|AFE66270.1| DIS3-like exonuclease 1 isoform 1 [Macaca mulatta]
gi|380788791|gb|AFE66271.1| DIS3-like exonuclease 1 isoform 1 [Macaca mulatta]
Length = 1054
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 207/657 (31%), Positives = 328/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KTAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +EE RKDLR + +F+IDP
Sbjct: 421 EGEIATILVENSISVIPFSEAQMCEMPVNTPENPWKVSREEEQKRKDLRKSHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LSI L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSIRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A SI W+L+ ++ + W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SVLSADLCSLLGGVDRYAVSIMWELDKTSYEIKEVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FSVVDDIPEFKDLDEKSKQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M K N
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK------KMEIKGN----- 826
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 827 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 854
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 855 TELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDGLVI 911
>gi|444721663|gb|ELW62387.1| DIS3-like exonuclease 1 [Tupaia chinensis]
Length = 1027
Score = 289 bits (739), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 206/657 (31%), Positives = 323/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 303 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 345
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + A ++ V RID W S +P H + V GR G++
Sbjct: 346 RIPKIRISTQQA------------AALQDFRVVVRIDSWEATSVYPNGHFVRVLGRIGDL 393
Query: 236 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 394 EGEIATILVENSISVIPFSEAQMGEMPVNTPESPWKVSPEEEHERKDLRRSHLVFSIDPK 453
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L +G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 454 GCEDVDDTLSVRTLGNGDLELGVHIADVTHFVPPNSCIDIEARTRATTYYLADRRFDMLP 513
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L+ + + W GRT+IRS KL YE AQ ++DG
Sbjct: 514 SVLSADLCSLLGGVDRYAVSVMWELDRTSYQIKKVWYGRTIIRSAYKLFYEAAQQLLDGN 573
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F + + Q + ++ +I L ++++ ++ KR GAL LE +
Sbjct: 574 FSAATDIPELRDLDEKSRQAKLEELAWAIGKLTDIARHVRAKRDQCGALELEGVEVRVQL 633
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 634 DERKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 693
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL++A + D V+ +L + AT+ M A YF +G
Sbjct: 694 RECAKAKGFFIDTRSNKTLADSLDKAHD--PSDPVVNRLLRSMATQAMSNALYFSTGSCA 751
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ K RRM K+N
Sbjct: 752 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAIS------KDRRMDVKDN----- 799
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 800 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 827
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 828 TELFQCMYFKDKDPDSDERCVSDGVIYSVRTNGVLVFIPRFGIKGAAYLKNKDGLVI 884
>gi|225438438|ref|XP_002276939.1| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Vitis
vinifera]
gi|296082564|emb|CBI21569.3| unnamed protein product [Vitis vinifera]
Length = 937
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 183/521 (35%), Positives = 274/521 (52%), Gaps = 56/521 (10%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RP+GRVV II+R+ W +Y GS + + + ++
Sbjct: 338 RPSGRVVGIIKRN--------------WHSY-CGSLEPMPMPAGNGGIAHALFVS---KD 379
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ PK+ + + L + + KR+ +VA +D W+ S +P H + G G+
Sbjct: 380 RRIPKIRIQTRQLGNLLDKRI----------IVA--VDSWDCLSRYPSGHYVRTIGEIGD 427
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 292
+ + +L EN I FS + L+CLP +PW V E+L + R DLR+ C+F++DP
Sbjct: 428 RDTESEVVLIENDINSRPFSLQVLACLPPLPWSVSSEDLANPCRLDLRHVCVFSVDPPGC 487
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D+DDAL L +G VGVHIADV+ FV PGT LD EA R TSVY+++R+I MLP
Sbjct: 488 KDIDDALHCTTLPNGNFEVGVHIADVTNFVHPGTPLDDEAAQRGTSVYLVERRIDMLPKP 547
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
L+E++ SL V+RLAFS+ W++ +++ +++I+SC LSY AQ +D +
Sbjct: 548 LTEDICSLRSDVERLAFSVIWEMTPQAEIISTKYTKSIIKSCAALSYIEAQARMDDSRLM 607
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
+ + ++++ ++K+++ +R GAL L +++ F D E
Sbjct: 608 DP-------------------LTMDLRNMNALAKVMRLRRIERGALTLASAEVKFQIDTE 648
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + + N + EEFML AN + AE I + FP +LLRRHP+P L
Sbjct: 649 THDPLDIGMYQIREANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPSPTREMLEPLLR 708
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
+ GL LD SSS SL+ A + DD ++ ATR M A YFCSGD
Sbjct: 709 TAAAVGLNLDVSSSKALADSLDHA---VGDDPYFNKLIRILATRCMTQAVYFCSGDLS-P 764
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
++ HY LA P+YTHFTSP+RRY D++VHR L A+L KL
Sbjct: 765 PEFHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGLYKL 805
>gi|170035482|ref|XP_001845598.1| mitotic control protein dis3 [Culex quinquefasciatus]
gi|167877510|gb|EDS40893.1| mitotic control protein dis3 [Culex quinquefasciatus]
Length = 970
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 171/436 (39%), Positives = 243/436 (55%), Gaps = 25/436 (5%)
Query: 200 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 259
AT+ + + ID W S +P H + G GE + + IL E+ + FS E S
Sbjct: 382 ATLISQRIVVAIDYWPRHSKYPIGHFVRALGGIGEKDTENEVILLEHDVPHGSFSEEIKS 441
Query: 260 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 319
LP +PW V EE R DLR+ I ++DP TD+DDAL RL++G VGVHIADV+
Sbjct: 442 QLPKLPWTVEPEEYKKRVDLRDITICSVDPPGCTDIDDALHARRLANGNIEVGVHIADVT 501
Query: 320 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 379
+F+ PGT LD EA +R+T+VY++ ++I M+P +LS + SL G +RLAFS W+L+
Sbjct: 502 HFIKPGTPLDKEASLRATTVYLVDKRIDMVPDVLSSNLCSLRGGEERLAFSCIWELDDEA 561
Query: 380 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 439
++ + ++VI+S L+Y+ AQ IID D +N + +S++
Sbjct: 562 NIQNTRFHKSVIQSKAALTYQEAQLIID---DPSQTN----------------ETAQSLR 602
Query: 440 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 498
L ++KILK +R +GAL L + + F D E P D V D N + EEFMLLAN
Sbjct: 603 LLNTLAKILKRRRIDNGALVLASPEIRFNIDSETHDPIDVVAKKLMDTNSMVEEFMLLAN 662
Query: 499 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
+ AE I + FP+ ALLRRHP P + S G ++ T S Q SL++A
Sbjct: 663 VSVAEKIHQEFPEYALLRRHPCPPEANFEPLKKAASYQGFEIITDSGKQLATSLDEA--- 719
Query: 559 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
+K D F+ L+ TR M A YF SG + ++ HY LA P+YTHFTSP+RRY D+
Sbjct: 720 VKPDNPYFNTLLRILTTRCMMQAVYFISGTIQ-QAEYFHYGLASPIYTHFTSPIRRYADV 778
Query: 618 VVHRTLNAALEAEKLY 633
+VHR L A + A+ Y
Sbjct: 779 IVHRLLAACIGADATY 794
>gi|432117398|gb|ELK37741.1| Exosome complex exonuclease RRP44 [Myotis davidii]
Length = 928
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 186/526 (35%), Positives = 268/526 (50%), Gaps = 71/526 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 347 EKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGEV 393
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 394 GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 453
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 514 LSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLTYAEAQMRID----- 568
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S T+ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 569 --SATMND------------DITISLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHDEFSEHALLRKHPAPPPSNYEILVK 674
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLF----DILINYATRPMQLASYFCSGD 587
L++ T ++ SL+QA D F +L ATR M A YFCSG
Sbjct: 675 AAKSKNLEVKTDTAKALADSLDQA------DSATFPYLNTLLRILATRCMMQAVYFCSG- 727
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 728 --MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 771
>gi|395745419|ref|XP_003778263.1| PREDICTED: LOW QUALITY PROTEIN: exosome complex exonuclease RRP44
[Pongo abelii]
Length = 958
Score = 288 bits (738), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 269/522 (51%), Gaps = 63/522 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ CI ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLKCDVDRLAFSCXWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S+N D+ S++ L +++KILK R GAL L + + F D E
Sbjct: 599 -SANM-------------NDDITTSLRGLNKLAKILKKGRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
L++ T ++ +SL++A E Y L +L ATR M A YFCSG D
Sbjct: 705 AARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAVYFCSG---MD 759
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 760 NDFYHYGLASPIYTHFTSPIRRYADVIVHRLLAVAIGADCTY 801
>gi|426236545|ref|XP_004012228.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Ovis aries]
Length = 958
Score = 288 bits (738), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 182/523 (34%), Positives = 268/523 (51%), Gaps = 65/523 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + +D W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAVDGWPRNSRYPNGHFVKNLGEV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 424 GDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++ +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLRSNVDRLAFSCIWEMTHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S + + ++ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 --SAAMND------------NITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
L++ T ++ SL+QA + + + L+ ATR M A YFCSG
Sbjct: 705 AAKSKNLEIKTDTAKALADSLDQADSPI---FPYLNTLLRILATRCMMQAVYFCSG---M 758
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 759 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|405974096|gb|EKC38766.1| Exosome complex exonuclease RRP44 [Crassostrea gigas]
Length = 943
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 179/521 (34%), Positives = 264/521 (50%), Gaps = 57/521 (10%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
++PTG+VV II+R+ W Y G + K + V
Sbjct: 327 RQPTGKVVGIIKRN--------------WRQYCGMLQPSIIKQATRHLV--------VTA 364
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ PK+ + + D + +R + ID W S +PQ H + G G
Sbjct: 365 DKRIPKIRIETRQAADLMGQR------------IVVAIDNWPRTSRYPQGHFVRKLGNVG 412
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ E + +L E+ I +GFS L+CLP +PWE+ +E++ R+D R+ I ++DP T
Sbjct: 413 DKETENEVLLLEHDIPHAGFSEAVLNCLPTLPWEITKEDMERREDFRDLDICSVDPPGCT 472
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL L +G VGVHIADVS+F+ PGTA+D EA+ R T+VY+ ++I M+P LL
Sbjct: 473 DIDDALHCRDLPNGNLEVGVHIADVSHFIRPGTAIDKEAERRGTTVYLTDKRIDMVPELL 532
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL V+R AFS+ W++ + ++V+ ++VI+S L+Y AQ ID +
Sbjct: 533 SSNLCSLRSNVERFAFSVIWEITNNAEIVEARYAKSVIKSKAALTYAEAQMRIDDPSMTD 592
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
+ V +S+++L ++KILK KR GAL L +++ F D E
Sbjct: 593 A-------------------VTKSLRNLNRLAKILKKKRMEKGALTLASNEVRFHIDSET 633
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P D + N + EEFMLLAN + A+ + FPD + LRRHP P
Sbjct: 634 HDPIDVETKQIRETNSMVEEFMLLANVSTAQKTLQEFPDCSCLRRHPCPPPSNFDPLIKA 693
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDT 592
G ++D SS SLE+A L DD +L TR M A YFCSG +
Sbjct: 694 AQSKGFRIDVSSGKALADSLERA--VLPDDPYFNVMLRIMTTRCMAQAVYFCSGMLP-PS 750
Query: 593 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
++ HY LA +YTHFTSP+RRY D++VHR L + A+ Y
Sbjct: 751 EYIHYGLAAEIYTHFTSPIRRYSDIIVHRLLAVCIGADASY 791
>gi|327267843|ref|XP_003218708.1| PREDICTED: exosome complex exonuclease RRP44-like [Anolis
carolinensis]
Length = 968
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 184/521 (35%), Positives = 268/521 (51%), Gaps = 61/521 (11%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
RPTG+VV II+R+ W Y G S+ K++R L TP
Sbjct: 352 RPTGKVVGIIKRN--------------WRPYCGMLSKSQIKESRRHL---------FTPA 388
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ P++ + + +T+E + + ID W S +P H + G G
Sbjct: 389 DRRIPRIRIETRQ------------SSTLEGQRIIVAIDGWPRSSRYPHGHFVKNLGAAG 436
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ E + +L E+ + FS LS LP +PW + +++ R+DLR+ C+ ++DP T
Sbjct: 437 DKETETEVLLLEHDVPHQAFSQAVLSFLPQMPWSITDKDMKFREDLRHLCVCSVDPPGCT 496
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P LL
Sbjct: 497 DIDDALHCRDLENGNLEVGVHIADVSHFIRPGNALDQESAKRGTTVYLCEKRIDMVPELL 556
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL VDRLAFS W++N+ +V+ ++VI S L+Y AQ ID
Sbjct: 557 SSNLCSLRSNVDRLAFSCIWEMNNNAEVLKTRFTKSVINSKASLTYAEAQMRID------ 610
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
S ++ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 611 -SGSMND------------DITLSLRGLNKLAKILKKRRIDKGALTLSSPEVRFHMDSET 657
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P D ++ N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 658 HDPIDLQTKELKETNSMVEEFMLLANISVAQKIYDEFSEHALLRKHPAPPPSNYDILVKA 717
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDT 592
++ T S+ SL++A E Y L +L ATR M A YFCSG D
Sbjct: 718 AKSKDFEIKTDSAKALADSLDRA-ESPSFPY-LNTLLRILATRCMMQAVYFCSG---MDN 772
Query: 593 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 773 DFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTY 813
>gi|426236547|ref|XP_004012229.1| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Ovis aries]
Length = 847
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 182/523 (34%), Positives = 268/523 (51%), Gaps = 65/523 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 229 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 265
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + +D W S +P H + G
Sbjct: 266 DKRIPRI-------------RIETRQASTLEGRRIIVAVDGWPRNSRYPNGHFVKNLGEV 312
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 313 GDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 372
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 373 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 432
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++ +++ ++VI S L+Y AQ ID
Sbjct: 433 LSSNLCSLRSNVDRLAFSCIWEMTHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 487
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S + + ++ S++ L +++KILK +R GAL L + + F D E
Sbjct: 488 --SAAMND------------NITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 533
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 534 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 593
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
L++ T ++ SL+QA + + + L+ ATR M A YFCSG
Sbjct: 594 AAKSKNLEIKTDTAKALADSLDQADSPI---FPYLNTLLRILATRCMMQAVYFCSG---M 647
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 648 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 690
>gi|149730276|ref|XP_001495267.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Equus
caballus]
Length = 958
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 268/523 (51%), Gaps = 65/523 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + +D W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAVDGWPRNSRYPNGHFVKNLGEV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 424 GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 544 LSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLTYAEAQMRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S T+ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 --SATMND------------DITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
L++ T ++ SL++A + + L+ ATR M A YFCSG
Sbjct: 705 AAKSKNLEIKTDTAKSLADSLDRADSP---SFPYLNTLLRILATRCMMQAVYFCSG---M 758
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 759 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|66828537|ref|XP_647622.1| hypothetical protein DDB_G0268186 [Dictyostelium discoideum AX4]
gi|60475611|gb|EAL73546.1| hypothetical protein DDB_G0268186 [Dictyostelium discoideum AX4]
Length = 1504
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 185/532 (34%), Positives = 278/532 (52%), Gaps = 54/532 (10%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
K PTG+V+ I +R+ W +Y G +KN S + ++ + P
Sbjct: 577 KIPTGKVIGIFQRN--------------WRDYIGT----VEKNTSLFT----NFLMIVPF 614
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ P + V K+ + KRL R+D W+ S +P H + G G
Sbjct: 615 DYRIPLIRVPTKNPSQYLGKRL------------VIRMDSWDLNSNYPMGHYVSSIGESG 662
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLP----CVPWEVPQEELLSRKDLRNFCIFTIDP 289
+E +++A++ E+ I + L CLP PW++P EE R+ L N I +IDP
Sbjct: 663 SLETELSALMVEHDISLKQWPQSILKCLPESSDQSPWQIPPEEKAYRRQLTNHHIMSIDP 722
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
+ D+DDA+SI ++ I +GVHIADVS+FV G+ LD+EA+ R T++Y+ R+ ML
Sbjct: 723 LGSKDIDDAISIGYPTNDIIEIGVHIADVSHFVKEGSPLDLEAKRRGTTIYLPDRRFDML 782
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDL----NSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 405
P +LSE+V SL G+ R A S+ W N ++VD W GRT+I S +L Y+ AQDI
Sbjct: 783 PAVLSEDVCSLRGGLPRCAMSVVWQFKRNPNKTYEIVDTWFGRTIIHSSAELHYQLAQDI 842
Query: 406 IDGKF----DVESSNTLG---EGWP-QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 457
IDGK D +S T G G+ +++ SD+ + + L + + LK +R +GA
Sbjct: 843 IDGKIVDGKDKDSDVTGGGARAGYKHRIFNGITISDIKKDLLELCSIFRQLKKERVKNGA 902
Query: 458 LRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 515
L LE+ + F F+ + P +L +++ L E+M+LAN A I FP SALL
Sbjct: 903 LELESIEVRFKFNSKDSSQPKKIILKNDLEIHHLVAEYMILANSHVATKIHSVFPSSALL 962
Query: 516 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 575
RRHP PN + +++ S G QL T ++ Q +SL A + D YV IL
Sbjct: 963 RRHPKPNQIDFKSIKSYFSYCGFQLLTKTNKQLQESLASAVDSGGDVYV-NKILKLKIVN 1021
Query: 576 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
+ A YF +G + +++ HY LA YTHFTSP+RRY D++VHR L +L
Sbjct: 1022 VVSEAVYFSTGSV-NVSEFYHYGLAIDKYTHFTSPIRRYSDIIVHRQLWNSL 1072
>gi|426379458|ref|XP_004056414.1| PREDICTED: DIS3-like exonuclease 1 [Gorilla gorilla gorilla]
Length = 971
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 205/657 (31%), Positives = 326/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 290 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 337
Query: 236 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 338 EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK 397
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 457
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 518 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQL 577
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 578 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 637
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 695
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M K N
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK------KMEIKGN----- 743
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 744 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 771
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K+K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 772 TELFQCMYFKEKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVI 828
>gi|338715364|ref|XP_003363258.1| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Equus
caballus]
Length = 928
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 268/523 (51%), Gaps = 65/523 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 310 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 346
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + +D W S +P H + G
Sbjct: 347 DKRIPRI-------------RIETRQASTLEGRRIIVAVDGWPRNSRYPNGHFVKNLGEV 393
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 394 GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 453
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 454 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 513
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 514 LSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLTYAEAQMRID----- 568
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S T+ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 569 --SATMND------------DITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 614
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 615 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 674
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
L++ T ++ SL++A + + L+ ATR M A YFCSG
Sbjct: 675 AAKSKNLEIKTDTAKSLADSLDRADSP---SFPYLNTLLRILATRCMMQAVYFCSG---M 728
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 729 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 771
>gi|345788646|ref|XP_003433103.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Canis lupus
familiaris]
Length = 928
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 187/536 (34%), Positives = 272/536 (50%), Gaps = 65/536 (12%)
Query: 102 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSL 160
ER+ S +PTGRVV II+R+ W Y G S+ D K++R L
Sbjct: 297 ERILKTAVSEKMLKPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL 342
Query: 161 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESP 219
TP + P++ R+E A+ +E + ID W S
Sbjct: 343 ---------FTPADRRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSR 380
Query: 220 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 279
+P H + G GE E + +L E+ + FS LS LP +PW + ++++ +R+DL
Sbjct: 381 YPNGHFVKNLGEVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDL 440
Query: 280 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 339
R+ C+ ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+V
Sbjct: 441 RHLCVCSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTV 500
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 399
Y+ +++I M+P LLS + SL VDRLAFS W++N +++ ++VI S L+Y
Sbjct: 501 YLCEKRIDMVPELLSSNLCSLRCNVDRLAFSCIWEMNHDAEILKVRFTKSVINSKASLTY 560
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
AQ ID S + + D+ S++ L +++KILK +R GAL
Sbjct: 561 AEAQMRID-------SAAMND------------DITTSLRGLNKLAKILKKRRIEKGALT 601
Query: 460 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR+H
Sbjct: 602 LSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKH 661
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 577
PAP L++ T ++ SL++A + + L+ ATR M
Sbjct: 662 PAPPPSNYEILVKAAKSKNLEIKTDTAKSLADSLDRADSPT---FPYLNTLLRILATRCM 718
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 719 MQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 771
>gi|426236549|ref|XP_004012230.1| PREDICTED: exosome complex exonuclease RRP44 isoform 3 [Ovis aries]
Length = 929
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 182/523 (34%), Positives = 268/523 (51%), Gaps = 65/523 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 311 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 347
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + +D W S +P H + G
Sbjct: 348 DKRIPRI-------------RIETRQASTLEGRRIIVAVDGWPRNSRYPNGHFVKNLGEV 394
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 395 GDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 454
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 455 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 514
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++ +++ ++VI S L+Y AQ ID
Sbjct: 515 LSSNLCSLRSNVDRLAFSCIWEMTHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 569
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S + + ++ S++ L +++KILK +R GAL L + + F D E
Sbjct: 570 --SAAMND------------NITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 615
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 616 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 675
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
L++ T ++ SL+QA + + + L+ ATR M A YFCSG
Sbjct: 676 AAKSKNLEIKTDTAKALADSLDQADSPI---FPYLNTLLRILATRCMMQAVYFCSG---M 729
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 730 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 772
>gi|345788644|ref|XP_542610.3| PREDICTED: exosome complex exonuclease RRP44 isoform 2 [Canis lupus
familiaris]
Length = 958
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 187/536 (34%), Positives = 272/536 (50%), Gaps = 65/536 (12%)
Query: 102 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSL 160
ER+ S +PTGRVV II+R+ W Y G S+ D K++R L
Sbjct: 327 ERILKTAVSEKMLKPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL 372
Query: 161 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESP 219
TP + P++ R+E A+ +E + ID W S
Sbjct: 373 ---------FTPADRRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSR 410
Query: 220 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 279
+P H + G GE E + +L E+ + FS LS LP +PW + ++++ +R+DL
Sbjct: 411 YPNGHFVKNLGEVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDL 470
Query: 280 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 339
R+ C+ ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+V
Sbjct: 471 RHLCVCSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTV 530
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 399
Y+ +++I M+P LLS + SL VDRLAFS W++N +++ ++VI S L+Y
Sbjct: 531 YLCEKRIDMVPELLSSNLCSLRCNVDRLAFSCIWEMNHDAEILKVRFTKSVINSKASLTY 590
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
AQ ID S + + D+ S++ L +++KILK +R GAL
Sbjct: 591 AEAQMRID-------SAAMND------------DITTSLRGLNKLAKILKKRRIEKGALT 631
Query: 460 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR+H
Sbjct: 632 LSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKH 691
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 577
PAP L++ T ++ SL++A + + L+ ATR M
Sbjct: 692 PAPPPSNYEILVKAAKSKNLEIKTDTAKSLADSLDRADSPT---FPYLNTLLRILATRCM 748
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 749 MQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|119598166|gb|EAW77760.1| hypothetical protein MGC4562, isoform CRA_c [Homo sapiens]
Length = 928
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 205/657 (31%), Positives = 325/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 204 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 246
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 247 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 294
Query: 236 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 295 EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK 354
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 355 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 414
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 415 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 474
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 475 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQL 534
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 535 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 594
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 595 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 652
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ K ++M K N
Sbjct: 653 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAIS------KDKKMEIKGN----- 700
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 701 -------LFSNKDLEE-------------------------LCRHINNRNQAAQHSQKQS 728
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 729 TELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVI 785
>gi|19115966|ref|NP_588616.1| DIS3-like exonuclease 1 isoform 2 [Homo sapiens]
gi|18314381|gb|AAH22089.1| DIS3 mitotic control homolog (S. cerevisiae)-like [Homo sapiens]
gi|119598165|gb|EAW77759.1| hypothetical protein MGC4562, isoform CRA_b [Homo sapiens]
gi|123993589|gb|ABM84396.1| hypothetical protein MGC4562 [synthetic construct]
gi|157928542|gb|ABW03567.1| DIS3 mitotic control homolog (S. cerevisiae)-like [synthetic
construct]
Length = 971
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 205/657 (31%), Positives = 325/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 290 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 337
Query: 236 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 338 EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK 397
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 457
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 518 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQL 577
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 578 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 637
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 695
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ K ++M K N
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAIS------KDKKMEIKGN----- 743
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 744 -------LFSNKDLEE-------------------------LCRHINNRNQAAQHSQKQS 771
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 772 TELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVI 828
>gi|119598167|gb|EAW77761.1| hypothetical protein MGC4562, isoform CRA_d [Homo sapiens]
Length = 920
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 205/657 (31%), Positives = 325/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 196 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 238
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 239 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 286
Query: 236 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 287 EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK 346
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 347 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 406
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 407 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 466
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 467 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQL 526
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 527 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 586
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 587 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 644
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ K ++M K N
Sbjct: 645 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAIS------KDKKMEIKGN----- 692
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 693 -------LFSNKDLEE-------------------------LCRHINNRNQAAQHSQKQS 720
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 721 TELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVI 777
>gi|114657753|ref|XP_001174666.1| PREDICTED: DIS3 mitotic control homolog (S. cerevisiae)-like
isoform 7 [Pan troglodytes]
gi|397515604|ref|XP_003828039.1| PREDICTED: DIS3-like exonuclease 1 [Pan paniscus]
Length = 971
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 205/657 (31%), Positives = 326/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 290 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 337
Query: 236 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 338 EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK 397
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 457
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
V + + Q + ++V +I L ++++ ++ KR GAL LE ++
Sbjct: 518 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGAEVRVQL 577
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 578 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 637
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 695
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M K N
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK------KMEIKGN----- 743
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 744 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 771
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 772 TELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVI 828
>gi|114657741|ref|XP_001174669.1| PREDICTED: DIS3 mitotic control homolog (S. cerevisiae)-like
isoform 8 [Pan troglodytes]
gi|410206628|gb|JAA00533.1| DIS3 mitotic control homolog-like [Pan troglodytes]
gi|410246988|gb|JAA11461.1| DIS3 mitotic control homolog-like [Pan troglodytes]
gi|410246990|gb|JAA11462.1| DIS3 mitotic control homolog-like [Pan troglodytes]
gi|410308652|gb|JAA32926.1| DIS3 mitotic control homolog-like [Pan troglodytes]
gi|410308662|gb|JAA32931.1| DIS3 mitotic control homolog-like [Pan troglodytes]
gi|410329463|gb|JAA33678.1| DIS3 mitotic control homolog-like [Pan troglodytes]
gi|410329465|gb|JAA33679.1| DIS3 mitotic control homolog-like [Pan troglodytes]
Length = 1054
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 205/657 (31%), Positives = 326/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 373 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 421 EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
V + + Q + ++V +I L ++++ ++ KR GAL LE ++
Sbjct: 601 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGAEVRVQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M K N
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK------KMEIKGN----- 826
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 827 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 854
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 855 TELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVI 911
>gi|291393084|ref|XP_002713032.1| PREDICTED: DIS3 mitotic control [Oryctolagus cuniculus]
Length = 957
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 185/523 (35%), Positives = 269/523 (51%), Gaps = 65/523 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSGIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DRRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + ++++ R DLR+ C+ ++DP
Sbjct: 424 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKHRVDLRHLCVCSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLRCDVDRLAFSCIWEMNHNAEILRTKFTKSVINSKASLTYAEAQMRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S T+ + D+ S++ L +++KILK +R +GAL L + + F D E
Sbjct: 599 --SATMND------------DITTSLRGLNKLAKILKRRRIENGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
L+++T ++ SL++A + + + L+ ATR M A YFCSG
Sbjct: 705 AAKSKNLEINTDTAKSLADSLDRAESPV---FPYLNTLLRILATRCMMQAVYFCSG---M 758
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 759 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|312375722|gb|EFR23034.1| hypothetical protein AND_13792 [Anopheles darlingi]
Length = 1171
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 190/569 (33%), Positives = 291/569 (51%), Gaps = 48/569 (8%)
Query: 80 PSTSDSTEKVSSSQQNDGM--NAIERLSAMIS-SYPTKR-PTGRVVSIIERSPRRDGIVG 135
P+T S E+V+ + +G+ + ++ ++A+++ + PT R G VV ++E+ R +
Sbjct: 457 PATEASLEEVADASAPEGVVVDEVQPVTAVVAQAQPTARNGLGFVVRVLEKRHNRQCVGT 516
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSI---- 191
F + Q + Y P + P M VL DLP++
Sbjct: 517 FAPIGQG---------------------KKHYRMFIPRDKRIPAMRVLHHDLPNAFLDPM 555
Query: 192 -----KKRLEEGDATIE-----MELV-AARIDEWNEESPFPQAHVLHVFGRGGEVEPQIN 240
K GD I +E++ A+I +W ++ P +L G+ G++E +
Sbjct: 556 NAPNDGKEGGSGDGDIAAGTDLLEVIYQAQIVQWQDDVPI--GTILRPIGKCGQLEVENE 613
Query: 241 AILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALS 300
AIL E + + + L+ LP P+ +P+EEL R DLR CIFTIDP+TA DLDDALS
Sbjct: 614 AILVEYNLDVTPYPESLLAQLPPCPYTIPEEELAKRTDLRGECIFTIDPATARDLDDALS 673
Query: 301 IERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSL 360
+ L DG +GVHI+DV+YF+ G++LD + ++R+TS+YM+ MLP L SL
Sbjct: 674 CKLLPDGNYEIGVHISDVTYFLREGSSLDEQVKLRATSIYMVDGVHHMLPKQLCNSC-SL 732
Query: 361 NPGVDRLAFSIFWDLNSA-GDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLG 419
PG D+LAFS+ W + G ++D RT+I SC +LSYEHAQ ++D + E S
Sbjct: 733 LPGQDKLAFSVLWKIRPEDGQILDTRFERTIINSCAQLSYEHAQLMLD---NPEGSLEGD 789
Query: 420 EGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDS 478
E P + + + + + L ++ L+ +R G L++ K F D G P
Sbjct: 790 ESMPVIAHGYTANGLRDIVNRLQSIAVKLRKRRMDGGCLKINQPKLTFRLDPATGRPLAY 849
Query: 479 VLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGL 538
+ N L E+FMLLAN + AE I A+P +LLR H AP+ +++ + HG
Sbjct: 850 GVYQLRASNELIEDFMLLANVSVAEAIHAAYPAISLLRSHRAPSDNMMKKLVRNLAAHGY 909
Query: 539 QLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYA 598
SS +S+E + + + +L +PM A Y+CS D+ HYA
Sbjct: 910 TFSYDSSKAIRESMEAIAKAAEHPDAVSSVLSVLLAKPMTRALYYCSTFASSPEDFAHYA 969
Query: 599 LAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
LA P+YTHFTSP+RRY D +VHR L A+L
Sbjct: 970 LAIPLYTHFTSPIRRYADCLVHRVLAASL 998
>gi|330805012|ref|XP_003290482.1| hypothetical protein DICPUDRAFT_155003 [Dictyostelium purpureum]
gi|325079410|gb|EGC33012.1| hypothetical protein DICPUDRAFT_155003 [Dictyostelium purpureum]
Length = 1035
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 188/575 (32%), Positives = 287/575 (49%), Gaps = 61/575 (10%)
Query: 56 DSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKR 115
D+ + A + +++ E + + PST E Q +D + AM+++ K+
Sbjct: 279 DNINRAVDGDIVAIELFEESKWNAPSTIIMLESEGVEQDDDSIAK----DAMVAN---KK 331
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV II+R+ W Y G + S + ++ P
Sbjct: 332 PTGRVVGIIKRN--------------WKPYCGAVEFKGDGSNQSTGL---HFLFFIPVDK 374
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + + + + +R + ID+W++ S +P H + G G+
Sbjct: 375 RIPKIRIKSRQVSNLLGRR------------IVVAIDQWDKNSKYPSGHFVKDLGPLGDK 422
Query: 236 EPQINAILYENAICCSGFSPESLSCLPC--VPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
E + +L + I F + CLP + V +++ RKDLR CIF++DP T
Sbjct: 423 ETESQVLLLQFDIPHHPFGASVMKCLPSPDIMDRVTPADMVGRKDLRKECIFSVDPPGCT 482
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL I+ LS G+ VGVHIADVS+FV GTA+D EA RSTSVY++ R+I MLP L
Sbjct: 483 DIDDALHIKELSKGVFEVGVHIADVSHFVQEGTAIDEEAASRSTSVYLVDRRIDMLPGEL 542
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL VDR AFS W + + G++++ +++IRSC L+YE AQ ID K
Sbjct: 543 SGNLCSLMCNVDRYAFSCIWKITADGEIINVEYTKSIIRSCASLTYEQAQIKIDDK---- 598
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY- 472
S N + +++ L ++K+L+ +RF GAL L + + F +E+
Sbjct: 599 SQN---------------DQIATNLRHLNNLAKVLRKQRFDRGALMLASPQVKFKTEEHG 643
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
G P D + + N + EEFMLLAN A+ I + FP A+LRRHP P
Sbjct: 644 GDPSDVEIYQLRETNAMIEEFMLLANIWVAKKIYKHFPGCAMLRRHPTPKKSSFELLTKL 703
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDT 592
G T++S + +SL+ ++ D + TR M A YF SG +
Sbjct: 704 IENKGFTFSTNTSKELSESLDSC--NIEGDPYFNTLCRIMTTRCMSPAVYFSSGSVPYE- 760
Query: 593 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
++ HY LA +YTHFTSP+RRYPD++VHR L A+
Sbjct: 761 EFNHYGLASEIYTHFTSPIRRYPDIIVHRLLATAI 795
>gi|417405419|gb|JAA49421.1| Putative exosomal 3'-5' exoribonuclease complex subunit [Desmodus
rotundus]
Length = 958
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 184/523 (35%), Positives = 269/523 (51%), Gaps = 65/523 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 377 DRRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 424 GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEQDMKNREDLRHLCVCSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 544 LSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S T+ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 --SATMND------------DITISLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
L++ T ++ SL++A + + L+ ATR M A YFCSG
Sbjct: 705 AAKSKNLEIKTDTAKSLADSLDRADSPT---FPYLNTLLRILATRCMMQAVYFCSG---M 758
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 759 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|219116793|ref|XP_002179191.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409082|gb|EEC49014.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 593
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 190/568 (33%), Positives = 278/568 (48%), Gaps = 73/568 (12%)
Query: 214 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC---------- 263
W +P + V G+ +E +I A+L E+ + F E L +
Sbjct: 12 WECTQRWPPCQNVQVLGKSCILENEIQALLLEHDVDHGDFDREVLQNVENAVASGVFVTS 71
Query: 264 ---VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 320
+ W+ E R+D R+ IFTIDP+TA DLDDAL + +L+DG +GVHIADVSY
Sbjct: 72 TGELGWKPTPEMYAGRRDYRDARIFTIDPTTAKDLDDALHVTKLADGRVEIGVHIADVSY 131
Query: 321 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGD 380
FV P + +D EAQ R+T+VY++ R +PMLP L E SLN V+RLAFS W +N G
Sbjct: 132 FVRPDSPVDTEAQYRATTVYLVDRTVPMLPRPLCEVACSLNENVERLAFSCVWTMNVDGT 191
Query: 381 V------VDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV-ESSNTLGEG-WPQL---YGQF 429
V D W GR+VI+SC +L Y AQ+IIDGK ES + E WP+ G
Sbjct: 192 VRQKNGNPDVWYGRSVIKSCARLDYATAQNIIDGKVGRGESDKAIDEALWPESRRPTGGH 251
Query: 430 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG-TPYDSVLSGREDLNF 488
+ V + ++ ++ V+ + RF +GAL L K F D G TP + D N
Sbjct: 252 TTAQVAQDVRLMHRVAMARRQLRFDNGALALNGIKLTFQLDTDGQTPLLAAPYPLRDSNR 311
Query: 489 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC-SKHGLQLDTSSSGQ 547
L EE+ML+AN AE + A+LRRHP P L + + + G +D SSS
Sbjct: 312 LVEEYMLMANYLVAERLITHTGRRAMLRRHPEPLEDGLDKVASVAKAGMGFNVDISSSQA 371
Query: 548 FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 607
H SL + + D VL + PMQ A YF +G D W H+AL P YTHF
Sbjct: 372 LHASLCRLGRECSDPLVL-QCVTQMLMTPMQPADYFAAGTM-DMAAWKHFALNIPYYTHF 429
Query: 608 TSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESL 667
TSP+RRY D++VHR L A ++
Sbjct: 430 TSPIRRYADVIVHRLLQA----------------------------------------TI 449
Query: 668 EGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSE 727
+G EA+ L D + ++A HCN++++A + ++ C ++++ + +K K +
Sbjct: 450 DGPEAVQTFPLD-----TDAVESIAAHCNEKRMASKKAQERCDRVFLSLFVKAKPMKSQL 504
Query: 728 ARVLALGPRFMTIYIEKLAIERRIYYDE 755
VL++G T+++ L I ++ +E
Sbjct: 505 GIVLSVGVSTFTVFVPSLGIAVLLFLEE 532
>gi|224071355|ref|XP_002303419.1| predicted protein [Populus trichocarpa]
gi|222840851|gb|EEE78398.1| predicted protein [Populus trichocarpa]
Length = 935
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 272/523 (52%), Gaps = 56/523 (10%)
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 172
+ RP+G VV II+R+ W +Y G S V Y
Sbjct: 336 SSRPSGLVVGIIKRN--------------WHSYCGSLEPMPMPAGSGGLV----YALFVS 377
Query: 173 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ PK+ + + L + + KR+ +VA +D W+ +S P H + G+
Sbjct: 378 KDRRIPKIRIQTRQLDNLLDKRI----------IVA--VDSWDRQSRHPSGHYIRSIGQI 425
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEEL--LSRKDLRNFCIFTIDPS 290
G+ + + +L EN I FS + L+CLP +PW V ++L +R DLR+ C+F++DP
Sbjct: 426 GDRDTETELVLIENDIDARPFSAQVLACLPPLPWSVSSKDLNESNRVDLRHLCVFSVDPP 485
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDAL L G VGVHIADV+ FV PGT LD EA R TSVY+++R+I MLP
Sbjct: 486 GCKDIDDALHCTMLPTGNFEVGVHIADVTNFVHPGTPLDDEATQRGTSVYLVERRIDMLP 545
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 410
L+E++ SL V+RLAFS+ W++ +++ ++VI+S LSY AQ +D
Sbjct: 546 KPLTEDICSLRADVERLAFSVIWEMTPEAEIISTKYTKSVIKSRAALSYVEAQARMDDSR 605
Query: 411 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 470
V+ V + ++++ ++KI++ +R GAL L +++ F D
Sbjct: 606 LVDP-------------------VTKDLRNMNALAKIMRQRRIHRGALTLASAEVKFQID 646
Query: 471 -EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
E P D + + N + EEFML AN + AE I + FP+ +LLRRHP P L
Sbjct: 647 TETHDPLDIGMYQIREANQMVEEFMLAANVSVAEKILKEFPECSLLRRHPTPTKEMLGPL 706
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
+ GL LD +SS SL++A + DD ++ ATR M A YFCSG+
Sbjct: 707 LRTAAAVGLNLDVTSSKALADSLDRA---VGDDPYFNKLIRIMATRCMTQAVYFCSGELS 763
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
++ HY LA P+YTHFTSP+RRY D++VHR L A++ KL
Sbjct: 764 -PPEFLHYGLAAPLYTHFTSPIRRYSDVIVHRLLAASIGIYKL 805
>gi|18916779|dbj|BAB85541.1| KIAA1955 protein [Homo sapiens]
Length = 947
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 205/657 (31%), Positives = 325/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 223 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 265
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 266 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 313
Query: 236 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 314 EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK 373
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 374 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 433
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 434 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 493
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 494 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQL 553
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 554 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 613
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 614 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 671
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ K ++M K N
Sbjct: 672 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAIS------KDKKMEIKGN----- 719
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 720 -------LFSNKDLEE-------------------------LCRHINNRNQAAQHSQKQS 747
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 748 TELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVI 804
>gi|443718138|gb|ELU08883.1| hypothetical protein CAPTEDRAFT_225692 [Capitella teleta]
Length = 949
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 196/588 (33%), Positives = 293/588 (49%), Gaps = 77/588 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RPTGRVV II+R+ W Y G +K S + +R P
Sbjct: 335 RPTGRVVGIIKRN--------------WRQYCGILQK------SVMQGANRHL--FIPAE 372
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
K P++ + + A +E + + ID W + S +PQ H + G G+
Sbjct: 373 RKIPRIRIETRQA------------AELEGKRIIVVIDSWPKNSRYPQGHFVRCLGEIGD 420
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 294
+ + +L E+ + + FS L CLP +PW + +E+ R DLR+ I ++DP TD
Sbjct: 421 KDTENEVLLLEHDVPHASFSKAVLDCLPKLPWVITEEDEKQRTDLRHVDICSVDPPGCTD 480
Query: 295 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 354
+DDAL + +G VGVHIADVS+F+ PGTA+D EA R T+VY++ ++I M+P LLS
Sbjct: 481 IDDALHCITMENGNYEVGVHIADVSHFIRPGTAIDKEAANRGTTVYLIDKRIDMVPELLS 540
Query: 355 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 414
+ SL G +R AFS W+LN ++ + +++I+S L+Y AQ ID V+
Sbjct: 541 SNLCSLKGGEERFAFSCIWELNQNAEIQNVRFHKSIIKSRAALTYAEAQMRIDDPKKVD- 599
Query: 415 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYG 473
+V +S++SL +++KILK +R GAL L + + F D E
Sbjct: 600 ------------------NVTQSLRSLNKLAKILKQRRIDQGALTLASPEIRFHIDSETH 641
Query: 474 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 533
P D + N + EEFMLLAN + A+ I + FP+ A+LRRHP+P +
Sbjct: 642 DPIDVQAKELRETNSMVEEFMLLANISVAKKITQEFPNCAILRRHPSPPLSNYDIIVDVA 701
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDT 592
+ G +L+ S+ SLE+A + + F+ ++ TR M A YFCSG +
Sbjct: 702 AAKGFKLNVSTGKALADSLERA---VVPGHPYFNTMLRILCTRCMMQAVYFCSG-LLAEA 757
Query: 593 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE----KLYWKHRRMLPKNN---- 644
++ HY LA P+YTHFTSP+RRY DL+VHR L A A+ +L KH+ NN
Sbjct: 758 EYEHYGLATPIYTHFTSPIRRYSDLMVHRLLAVAASADTSYPELLDKHKSQAICNNLNFR 817
Query: 645 HREG-VRGR----FLTGIFYDKDAAES-----LEGREALSVAALKYGV 682
HR GR T IF+ ++ + AL + KYG+
Sbjct: 818 HRMAQYAGRASVGLHTQIFFKSRVSDEKGYVLFVRKNALQILIPKYGL 865
>gi|219521928|ref|NP_001137160.1| DIS3-like exonuclease 1 isoform 1 [Homo sapiens]
gi|166201903|sp|Q8TF46.2|DI3L1_HUMAN RecName: Full=DIS3-like exonuclease 1
Length = 1054
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 205/657 (31%), Positives = 325/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 373 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 421 EGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRKSHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVCVQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M K N
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK------KMEIKGN----- 826
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 827 -------LFSNKDLEE-------------------------LCRHINNRNQAAQHSQKQS 854
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 855 TELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVI 911
>gi|24649634|ref|NP_651246.2| Dis3, isoform A [Drosophila melanogaster]
gi|442620866|ref|NP_001262910.1| Dis3, isoform B [Drosophila melanogaster]
gi|7301148|gb|AAF56281.1| Dis3, isoform A [Drosophila melanogaster]
gi|440217834|gb|AGB96290.1| Dis3, isoform B [Drosophila melanogaster]
Length = 982
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 281/545 (51%), Gaps = 63/545 (11%)
Query: 91 SSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSR 150
+ +N+ +N + +A +S+ T PTGR+V I+ R +W Y G +
Sbjct: 327 AKDENEMLNQVR--AAALSAERT--PTGRIVGIVRR--------------KWRQYCGILQ 368
Query: 151 KDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAAR 210
+ D P K P++ + + A ++ + +
Sbjct: 369 PSL--------IEDTNRHIFVPADRKIPRIRIETRQA------------AMLQNQRIIVT 408
Query: 211 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 270
ID W S +P H + G G++ + IL E+ + FS E LS LP +PW +
Sbjct: 409 IDTWPRNSRYPHGHFVRSLGPLGDMATENEVILLEHDVPHCKFSDEVLSFLPKMPWTITD 468
Query: 271 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 330
E+ R DLR+ I ++DP TD+DDAL + L +G VGVHIADVS+F+ PG ALD+
Sbjct: 469 EDYSKRVDLRDLYICSVDPPGCTDIDDALHCKELPNGNLEVGVHIADVSHFIRPGNALDM 528
Query: 331 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 390
EA R T+VY++ ++I M+P LLS + SL GV+R AFS W++++ +V+ + ++V
Sbjct: 529 EAAARGTTVYLVGKRIDMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLSKRFHKSV 588
Query: 391 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 450
I+S ++YE AQ+IID D N ++ +S+++L ++KILK
Sbjct: 589 IKSKRAMTYEEAQNIID---DATQQN----------------EIAKSLRNLNRLAKILKK 629
Query: 451 KRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 509
+R +GAL L + + F D E P + + + N + EEFMLLAN T AE IA F
Sbjct: 630 RRMDNGALVLASPEIRFQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIATEF 689
Query: 510 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 569
+ A+LRRHP P G Q+D +S + SL++ +K D F+ +
Sbjct: 690 SECAVLRRHPRPPPTNFDPLVKSARYQGFQVDINSGLELSHSLDKC---VKADNPYFNTM 746
Query: 570 IN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
I TR M A YF SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A++
Sbjct: 747 IRILTTRCMMQAVYFISGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIG 805
Query: 629 AEKLY 633
A+ Y
Sbjct: 806 ADSTY 810
>gi|385719244|gb|AFI71920.1| FI19082p1 [Drosophila melanogaster]
Length = 1005
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 281/545 (51%), Gaps = 63/545 (11%)
Query: 91 SSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSR 150
+ +N+ +N + +A +S+ T PTGR+V I+ R +W Y G +
Sbjct: 350 AKDENEMLNQVR--AAALSAERT--PTGRIVGIVRR--------------KWRQYCGILQ 391
Query: 151 KDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAAR 210
+ D P K P++ + + A ++ + +
Sbjct: 392 PSL--------IEDTNRHIFVPADRKIPRIRIETRQA------------AMLQNQRIIVT 431
Query: 211 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 270
ID W S +P H + G G++ + IL E+ + FS E LS LP +PW +
Sbjct: 432 IDTWPRNSRYPHGHFVRSLGPLGDMATENEVILLEHDVPHCKFSDEVLSFLPKMPWTITD 491
Query: 271 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 330
E+ R DLR+ I ++DP TD+DDAL + L +G VGVHIADVS+F+ PG ALD+
Sbjct: 492 EDYSKRVDLRDLYICSVDPPGCTDIDDALHCKELPNGNLEVGVHIADVSHFIRPGNALDM 551
Query: 331 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 390
EA R T+VY++ ++I M+P LLS + SL GV+R AFS W++++ +V+ + ++V
Sbjct: 552 EAAARGTTVYLVGKRIDMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLSKRFHKSV 611
Query: 391 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 450
I+S ++YE AQ+IID D N ++ +S+++L ++KILK
Sbjct: 612 IKSKRAMTYEEAQNIID---DATQQN----------------EIAKSLRNLNRLAKILKK 652
Query: 451 KRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 509
+R +GAL L + + F D E P + + + N + EEFMLLAN T AE IA F
Sbjct: 653 RRMDNGALVLASPEIRFQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIATEF 712
Query: 510 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 569
+ A+LRRHP P G Q+D +S + SL++ +K D F+ +
Sbjct: 713 SECAVLRRHPRPPPTNFDPLVKSARYQGFQVDINSGLELSHSLDKC---VKADNPYFNTM 769
Query: 570 IN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
I TR M A YF SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A++
Sbjct: 770 IRILTTRCMMQAVYFISGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIG 828
Query: 629 AEKLY 633
A+ Y
Sbjct: 829 ADSTY 833
>gi|321478602|gb|EFX89559.1| hypothetical protein DAPPUDRAFT_310536 [Daphnia pulex]
Length = 956
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 203/629 (32%), Positives = 299/629 (47%), Gaps = 90/629 (14%)
Query: 82 TSDSTEKVSSSQQNDGMNAIERLSAMI---SSYPTKRPTGRVVSIIERSPRRDGIVGFLN 138
TS S + ++ D + IE+ ++ + ++PTG++V II R
Sbjct: 301 TSPSGIVLEDQEEQDPGDEIEKEEKLLIDSTKSKDRQPTGKIVGIIRR------------ 348
Query: 139 VNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEG 198
+W Y G +P+ P K PK+ R+E
Sbjct: 349 --KWRQYCGILLPSV--------LPEGTRHLFVPAERKIPKI-------------RIETR 385
Query: 199 DA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPES 257
A T+ + + ID W S +P H + G G+ + + +L E+ + F
Sbjct: 386 QAVTLSSQKIIVAIDSWPRTSRYPLGHFVRALGNIGDKDTENEVLLLEHDVPHHSFPETV 445
Query: 258 LSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 317
L+CLP +PW + +EE+ R+DLR+ I ++DP TD+DDAL LS + +GVHIAD
Sbjct: 446 LACLPSMPWMITEEEVNRREDLRHLDICSVDPPGCTDIDDALHFRELSPNLYEIGVHIAD 505
Query: 318 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 377
VS+FV P TALD EA R T+VY++ R+I M+P LLS + SL P +RLAFS+ W + +
Sbjct: 506 VSHFVRPDTALDKEAANRGTTVYLVDRRIDMVPELLSSNLCSLRPDQERLAFSVIWQVTA 565
Query: 378 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 437
++ ++VIRS +Y AQ ID + +++ +S
Sbjct: 566 DAEIQKTRFTKSVIRSRRAFTYAEAQCNID-------------------DSLQQNELAKS 606
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFD---EYGTPYDSVLSGREDLNFLFEEFM 494
++ L +++KILK R GAL+L S P F+ E P D + D N + EEFM
Sbjct: 607 LRGLNKLAKILKKNRMDKGALQL--SSPEIRFEVSTETNDPIDVISKPMLDTNSMVEEFM 664
Query: 495 LLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 554
LLAN + A+ I + FP+ A+LRRHP P F G LD SS+ SL+
Sbjct: 665 LLANISVADHIFKHFPECAVLRRHPVPPASNFEPFLKAGKTQGFTLDVSSNKALAASLDA 724
Query: 555 AREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
A +K D V + ++ ATR M A YF SG D+ HY LA P+YTHFTSP+RR
Sbjct: 725 A---VKPDNVYMNTMLRILATRCMMQAVYFSSGTVA-QVDFYHYGLAAPIYTHFTSPIRR 780
Query: 614 YPDLVVHRTLNAALEAEKLYWK---------------HRRMLPKNNHREGVRGRFLTGIF 658
Y DL+VHR L A+ A+ Y + +R + + R V T +F
Sbjct: 781 YADLLVHRLLAVAVGADVTYTELLNRKCAQQLCNNLNYRHKMSQYAQRSSV--ALHTHLF 838
Query: 659 Y-----DKDAAESLEGREALSVAALKYGV 682
+ D+DA + AL V KYG+
Sbjct: 839 FRHRVQDEDAYVLFVRQNALQVLIPKYGL 867
>gi|157130204|ref|XP_001655640.1| mitotic control protein dis3 [Aedes aegypti]
gi|108871997|gb|EAT36222.1| AAEL011693-PA [Aedes aegypti]
Length = 970
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 172/434 (39%), Positives = 241/434 (55%), Gaps = 26/434 (5%)
Query: 202 IEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCL 261
I ++V A ID W S +P H + G GE + + IL E+ + FS E S L
Sbjct: 384 ITQKIVVA-IDYWPRHSKYPIGHFVRALGGIGEKDTENEVILLEHDVPHGSFSAEIQSQL 442
Query: 262 PCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYF 321
P +PW V EE R DLR+ I ++DP TD+DDAL RL +G VGVHIADV++F
Sbjct: 443 PKLPWTVDPEEYRKRVDLRDITICSVDPPGCTDIDDALHARRLDNGNIEVGVHIADVTHF 502
Query: 322 VLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV 381
+ PGT LD EA +R+T+VY++ ++I M+P +LS + SL G +RLAFS W+L+ ++
Sbjct: 503 IKPGTPLDKEAGLRATTVYLVDKRIDMVPDVLSSNLCSLRGGEERLAFSCIWELDDGANI 562
Query: 382 VDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSL 441
++ ++VI+S L+Y+ AQ IID D +N + S++ L
Sbjct: 563 INTKFHKSVIKSKAALTYQEAQLIID---DPTQTNQTAQ----------------SLRLL 603
Query: 442 YEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKT 500
+++KILK +R +GAL L + + F D E P D V D N + EEFMLLAN +
Sbjct: 604 NKLAKILKRRRIDNGALVLASPEIRFNIDSETHDPIDVVAKKLLDTNSMVEEFMLLANVS 663
Query: 501 AAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 560
A I FP+ A+LRRHP P + S G Q+DTS SL+ A +K
Sbjct: 664 VAAKIQSEFPECAMLRRHPCPPDANFDPLKKAASYQGFQIDTSCGKNLATSLDLA---VK 720
Query: 561 DDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
D F+ L+ ATR M A YF SG + ++ HY LA P+YTHFTSP+RRY D++V
Sbjct: 721 PDNPYFNTLLRILATRCMMQAVYFISGTIQQQ-EYFHYGLASPIYTHFTSPIRRYADVIV 779
Query: 620 HRTLNAALEAEKLY 633
HR L A + A+ Y
Sbjct: 780 HRLLAACIGADATY 793
>gi|158285738|ref|XP_308437.4| AGAP007395-PA [Anopheles gambiae str. PEST]
gi|157020138|gb|EAA04469.4| AGAP007395-PA [Anopheles gambiae str. PEST]
Length = 1209
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 269/533 (50%), Gaps = 46/533 (8%)
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 172
T+ G VV+I+E+ R + FL + + + Y P
Sbjct: 546 TQNSVGFVVAILEKRHNRQCVGKFL---------------------AAAPGKKHYRVFMP 584
Query: 173 THPKYPKMVVLVKDLPDSI-----------------KKRLEEGDATIEMELVAARIDEWN 215
+ P + V +D P+++ +K + GD + L A I EW
Sbjct: 585 RDMRIPPVRVFKQDWPNALLSTNIAKLKDDKEEKEDRKVPQTGDVDVTDVLYQAEIIEWQ 644
Query: 216 EESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS 275
+E P +L G+ G +E + +IL E+ + + + L+ LP VP+ +PQEEL
Sbjct: 645 DEVPI--GTILKSIGKCGVLEVENESILVEHNLDVTPYGEAILAQLPAVPYCIPQEELER 702
Query: 276 RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 335
R+DLR CIFTIDP+TA DLDDALS ++L +G ++GVHI+DV+YF+ + LD ++R
Sbjct: 703 REDLRGECIFTIDPATARDLDDALSCKQLENGNYQIGVHISDVTYFLRESSPLDELVKLR 762
Query: 336 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCC 395
+TS+YM+ MLP L SL PG D+LAFS+FW++ G V+ RTVI SC
Sbjct: 763 ATSIYMVDTVYHMLPKQLC-NTCSLLPGEDKLAFSVFWEMQPDGTVLSTRFARTVINSCS 821
Query: 396 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 455
+LSYEHAQ ++D S + +P++ + + + + +L ++ L+ +R D
Sbjct: 822 QLSYEHAQLMLDNP----SCEVEEDQFPEIMHGYNAKQLCKIVNTLQSIAVQLRQRRMDD 877
Query: 456 GALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSAL 514
G L++ K F D G P + + N + E+FMLLAN + A I +AFP+ +L
Sbjct: 878 GCLKINQPKLTFRLDPATGRPIEYGVYKVRPSNEMIEDFMLLANTSVANAIYKAFPEISL 937
Query: 515 LRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYAT 574
LR H P ++ S HG L +S + +E ++ +L
Sbjct: 938 LRAHSPPAENMMKNLVRTLSLHGHALSYASPKDIRECMETIITTSENPDATRSVLSVLLA 997
Query: 575 RPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
+PM A Y+CS + HYALA P+YTHFTSP+RRY D +VHR L AAL
Sbjct: 998 KPMIRAQYYCSLYATTPEHFMHYALAIPMYTHFTSPIRRYADCLVHRVLAAAL 1050
>gi|410947519|ref|XP_003980492.1| PREDICTED: LOW QUALITY PROTEIN: exosome complex exonuclease RRP44
[Felis catus]
Length = 958
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 267/523 (51%), Gaps = 65/523 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 340 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 376
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 377 DKRIPRI-------------RIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVKNLGEV 423
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 424 GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 483
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 484 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 543
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 544 LSSNLCSLRCNVDRLAFSCIWEMNHNAEILKVRFTKSAINSKASLTYAEAQMRID----- 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S + + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 --STAMND------------DITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 644
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 645 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 704
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
L++ T ++ SL++A + + L+ ATR M A YFCSG
Sbjct: 705 AAKSKNLEIKTDTAKSLADSLDRADSPT---FPYLNTLLRILATRCMMQAVYFCSG---M 758
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 759 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|330843802|ref|XP_003293834.1| hypothetical protein DICPUDRAFT_158751 [Dictyostelium purpureum]
gi|325075801|gb|EGC29647.1| hypothetical protein DICPUDRAFT_158751 [Dictyostelium purpureum]
Length = 1294
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 199/662 (30%), Positives = 316/662 (47%), Gaps = 100/662 (15%)
Query: 108 ISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREY 167
+S+ K PTG+V+ + +R+ W +Y G +KN +S + +
Sbjct: 409 VSNQDLKIPTGKVIGVFQRN--------------WRDYVGT----VEKNTNSFT----NF 446
Query: 168 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 227
+ + P + P + V K+ I KRL RID W+ S P H +
Sbjct: 447 VMVVPFDWRIPIIKVPTKNPAQYIGKRL------------IVRIDNWDLNSKSPMGHYVS 494
Query: 228 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLRNFC 283
G G +E ++ A++ E+ I + L CLP PW++P+EE R+ L +
Sbjct: 495 TIGESGSLETELQALMVEHDISLKPWPTSILKCLPESSEEAPWQIPKEEFKYRRVLNDHH 554
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
+IDP + D+DDA+SI SD I VGVHIADVS+FV G+ALDIEA+ R T++Y+
Sbjct: 555 TMSIDPLGSKDIDDAISIGYPSDDIIEVGVHIADVSFFVKEGSALDIEARRRGTTIYLPD 614
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHA 402
R+ MLP +LSE+V SL G R A S W ++++ W GRT+I S +L Y+ A
Sbjct: 615 RRFDMLPAVLSEDVCSLRGGFPRCAMSCIWQFKRGTCEIINTWFGRTIIHSSGELHYQLA 674
Query: 403 QDIIDG--------KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 454
QDII+G DV + +++ + SD+ + + +L + ++LK R
Sbjct: 675 QDIINGVVVDGKDKDTDVTNGGKNAGYRNRVFNGLKISDIKKDLINLRTIFRLLKKNRED 734
Query: 455 DGALRLENSKPVFLF--DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS 512
+GAL LE+ + F F D G P VL +++ L E+M+LAN + A I +FP S
Sbjct: 735 NGALDLESIEVRFQFNQDAPGKPEKIVLKNDLEIHSLVAEYMILANSSVASKIYSSFPSS 794
Query: 513 ALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY 572
+LLRRHP PN + + G L+T ++ + +SL +A++ +D+ + IL
Sbjct: 795 SLLRRHPKPNQINFESIKPLFNLCGFDLNTKTNKELAESLSEAKD--SNDHFINQILKLK 852
Query: 573 ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
+ A YF +G + ++ HY LA YTHFTSP+RRY D++VHR L +L
Sbjct: 853 TVNIVSEAVYFSTGSI-NVNEFYHYGLALDKYTHFTSPIRRYSDIIVHRQLWNSLT---- 907
Query: 633 YWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVA 692
+ G G F YD + + N+
Sbjct: 908 -------------QNGQPGNFNP---YDNYS------------------------MTNLT 927
Query: 693 THCNDRKLACRNVKDACVKLY--MWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERR 750
H N R A + V+ +L+ ++ LK KE + EA + + + +Y+ + + R
Sbjct: 928 DHLNIRHRASKTVQRDATELFQSLYFQLKPKEKV--EAIITDIRSNGIVVYVPEFGLRSR 985
Query: 751 IY 752
++
Sbjct: 986 VF 987
>gi|256072318|ref|XP_002572483.1| ribonuclease II-related [Schistosoma mansoni]
Length = 1769
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 215/688 (31%), Positives = 327/688 (47%), Gaps = 89/688 (12%)
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKN-----RSSLSVPDREYIQ 169
TG VV I++ R +G L + F K + D N R+ ++ +
Sbjct: 232 TGHVVGILQSLHSR-AFIGNLQIPSNFQTPKKVSPKGDQNNNQTEPMRTDPALSNWRNAV 290
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
L PT + P++ + + P+ K E T + RI EW S FP+ +L
Sbjct: 291 LIPTDTRLPRVFIPREACPEGFLKNPE----TYKNVRFIGRITEWLNSSMFPKGELLREL 346
Query: 230 GRGGEVEPQINAILYENAICCSGF--SPESLSCLPCVPWE-----------VPQEELLSR 276
Q + + +GF ++ P + E + +++ + R
Sbjct: 347 SCDSSTLIQDET---DRILVGAGFIWGVDAAFQFPDIVIESVRKSVDEVNAIREKDFIFR 403
Query: 277 KDLRNFCIFTIDPSTATDLDDALSIERLS-------------DGISRVGVHIADVSYFVL 323
KD R +C+FTIDPSTA DLDDAL I +L + VGVHIADVSYFV
Sbjct: 404 KDFRKYCVFTIDPSTARDLDDALHIRQLEPSEIEKLESSGYRNAFYEVGVHIADVSYFVK 463
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
P + +D EA R+TS+Y++Q +PMLP LL EE SLNPG D+LAFS+ + + ++
Sbjct: 464 PNSLVDKEAASRATSIYLVQLCVPMLPRLLCEEQCSLNPGEDKLAFSVVFTVTEDAKILT 523
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
W GRT IRSCCKLSYE AQ ID D + S++ G+ ++ + D+ +++ L +
Sbjct: 524 TWFGRTFIRSCCKLSYEDAQGFIDHP-DRDWSSS---GFVKVDEPYTIMDICQNVLKLND 579
Query: 444 VSKILKDKRFTDGALRLENSKPVF-LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++ ++ RF GALRL+ K F L +E G P + N+L EE+ML ANK+ A
Sbjct: 580 LATKMRKSRFHSGALRLDQVKSTFSLNNETGLPLGIAPYISKQSNWLIEEWMLAANKSVA 639
Query: 503 EVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
E +A+ PDSA LRRHP+P++++L E + + G+ ++ S+G L + L+ +
Sbjct: 640 ERLAKYLPDSAFLRRHPSPSVKQLTEVSSSLNVAGININIDSAGSIQDKL--PLKTLEHE 697
Query: 563 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
L + + T+ M LA YFC G + HYAL +YTHFTSP+RRY D++VHR
Sbjct: 698 ARLL-VTVALLTKTMNLAVYFCLGLLPSELSPAHYALNMQLYTHFTSPIRRYADVIVHRQ 756
Query: 623 LNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGV 682
L+A L E+ D + A+ LS A K
Sbjct: 757 LSAILAKEE---------------------------SDPEKADWY-----LSTAFPKEMT 784
Query: 683 PCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYI 742
P L A CN +KL+ R + +L+ + +K+ V ++ R + I
Sbjct: 785 PVE--LQQQAEVCNSKKLSARLAGEESAELFFVLFVKETGPFNEVCAVTSILDRSFDVLI 842
Query: 743 EKLAIERRIYYDEVEGLIVEWLETTSTL 770
+ +R+Y L + WL + L
Sbjct: 843 LSCGLIKRVY------LQLMWLSVQNPL 864
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 182/565 (32%), Positives = 264/565 (46%), Gaps = 91/565 (16%)
Query: 208 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP-- 265
RI +W E S +P + FG E+E IL E I F+PE L LP P
Sbjct: 1183 VCRITKWFENSKYPHGVIEQNFGNLNELEKATENILLEYGITDDQFTPEELQGLPTSPQE 1242
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
+++P+ E R+D R+ C+ TIDP A D DDAL I RL++G+ +VG+HIADVSYFV P
Sbjct: 1243 FQIPKIEYERRRDFRSHCVITIDPKDAKDFDDALHITRLNNGLYQVGIHIADVSYFVYPN 1302
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
+ LD A R+TSVY++Q+ IPMLP +LS+ + SL P DRLAFSI + G++VD W
Sbjct: 1303 SPLDKRAADRTTSVYLVQKVIPMLPPILSQHLCSLVPNEDRLAFSILLTVKENGEIVDEW 1362
Query: 386 IGRTVIRSCCKLSYEHAQDII---DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
GR++IRS C+L+Y+ A II +E + L E P+ F + D+ + SL+
Sbjct: 1363 FGRSIIRSRCRLTYDEAWSIIQMTQSNPAIEDKSCLLEFLPKPEAPFTFEDLQHCLSSLH 1422
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLF-----------DEYGT---PYDSVLSGREDLNF 488
+++ L+ R +GA+ LE + F F +E T P + R +
Sbjct: 1423 LIAQNLRSHRIENGAVSLEKLELNFNFPKPLSVMEKCTNECSTTRWPQGFSVKVRNPAHH 1482
Query: 489 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 548
L EE+M++AN++ A + F A LR HP P + + + F L D
Sbjct: 1483 LIEEWMIVANQSVARFLFGNFIKRATLRNHPKPEKKNISYDDHFL--RMLSFDP------ 1534
Query: 549 HQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 608
QS+ Q ++NY W HY L+ P+YTHFT
Sbjct: 1535 -QSILQQNNI---------TMLNYT--------------------W-HYGLSIPLYTHFT 1563
Query: 609 SPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLE 668
SP+RRY DL+VHR + L + + ++ ++N KD +S
Sbjct: 1564 SPIRRYADLMVHRQIARILGCDNYVYPELQISFQSNDDS-----------IQKDIKDS-- 1610
Query: 669 GREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEA 728
DI + VA CNDR+L R +A L++ L+
Sbjct: 1611 -----------------DIDLLVA-WCNDRRLKARRAGEASQHLFLTACLRDYGPFYENG 1652
Query: 729 RVLALGPRFMTIYIEK--LAIERRI 751
V+ L + I I L IE I
Sbjct: 1653 TVMDLSANKIRILIASFGLTIETEI 1677
>gi|15292611|gb|AAK93574.1| SD10981p [Drosophila melanogaster]
Length = 982
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 183/545 (33%), Positives = 280/545 (51%), Gaps = 63/545 (11%)
Query: 91 SSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSR 150
+ +N+ +N + +A +S+ T PTGR+V I+ R +W Y G +
Sbjct: 327 AKDENEMLNQVR--AAALSAERT--PTGRIVGIVRR--------------KWRQYCGILQ 368
Query: 151 KDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAAR 210
+ D P K P++ + + A ++ + +
Sbjct: 369 PSL--------IEDTNRHIFVPADRKIPRIRIETRQA------------AMLQNQRIIVT 408
Query: 211 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 270
ID W S +P H + G G++ + IL E+ + FS E LS LP +PW +
Sbjct: 409 IDTWPRNSRYPHGHFVRSLGPLGDMATENEVILLEHDVPHCKFSDEVLSFLPKMPWTITD 468
Query: 271 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 330
E+ R DLR+ I ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD+
Sbjct: 469 EDYSKRVDLRDLYICSVDPPGCTDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNALDM 528
Query: 331 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 390
EA R T+VY++ ++I M+P LLS + SL GV+R AFS W++++ +V+ + ++V
Sbjct: 529 EAAARGTTVYLVGKRIDMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLSKRFHKSV 588
Query: 391 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 450
I+S ++YE AQ+IID D N ++ +S+++L ++KILK
Sbjct: 589 IKSKRAMTYEEAQNIID---DATQQN----------------EIAKSLRNLNRLAKILKK 629
Query: 451 KRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 509
+R +GAL L + + F D E P + + + N + EEFMLLAN T AE IA F
Sbjct: 630 RRMDNGALVLASPEIRFQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIATEF 689
Query: 510 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 569
+ A+LRRHP P G Q+D +S + SL++ +K D F+ +
Sbjct: 690 SECAVLRRHPRPPPTNFDPLVKSARYQGFQVDINSGLELSHSLDKC---VKADNPYFNTM 746
Query: 570 IN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
I TR M A YF SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A++
Sbjct: 747 IRILTTRCMMQAVYFISGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIG 805
Query: 629 AEKLY 633
A+ Y
Sbjct: 806 ADSTY 810
>gi|194864535|ref|XP_001970987.1| GG14701 [Drosophila erecta]
gi|190652770|gb|EDV50013.1| GG14701 [Drosophila erecta]
Length = 1083
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 230/410 (56%), Gaps = 9/410 (2%)
Query: 223 AHVLHVFGRGGEVEPQINAILYENAIC-CSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 281
A ++ GR G ++ ++ AIL+ N + F P + Q++L RKDLR
Sbjct: 506 AELIQPVGRVGNLDDELKAILFHNGLRDIKPFEQRFNDMYSQTPPPISQDDLHQRKDLRK 565
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
CIFTIDP TA DLDDA+SIE+L + VGVHI+DVS+F+L LD + RSTS+Y+
Sbjct: 566 MCIFTIDPMTARDLDDAVSIEKLGENEYEVGVHISDVSHFLLEDNELDNIVKERSTSIYL 625
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW--IGRTVIRSCCKLSY 399
I MLP L SL PG D+ AFS+FW +N G ++ + RTVI SC + +Y
Sbjct: 626 ANEVIHMLPQSLCMRC-SLLPGEDKFAFSVFWRMNGEGAMLQKKPEFCRTVINSCSQFAY 684
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
EHAQ IID + + N +P + F D+ + + L++++ ++ RF +GAL
Sbjct: 685 EHAQKIIDNPNERFTEN----DFPTILNGFNTDDIKKRVLWLHDIASSIRKTRFDNGALT 740
Query: 460 LENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
+ N+K F+ D G P + + + N L EEFMLLAN+ A I +FPD A+LR H
Sbjct: 741 INNAKLRFILDPISGEPLSYEVEKQREANRLIEEFMLLANQAVARFIHDSFPDIAVLRNH 800
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 578
P P + L+ G +LD SSS +S+ + + + + L +PM
Sbjct: 801 PPPLTKSLKALREKLLALGFELDYSSSKALQESMVRLCNEAPNPVAMNACLSQLLMKPMA 860
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
A+YFCS + D HYAL+ P+YTHFTSP+RRYPD++VHR L AAL+
Sbjct: 861 RATYFCSEGKTEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALK 910
>gi|19922976|ref|NP_612012.1| CG16940, isoform A [Drosophila melanogaster]
gi|16198179|gb|AAL13898.1| LD37985p [Drosophila melanogaster]
gi|23092668|gb|AAF47351.2| CG16940, isoform A [Drosophila melanogaster]
gi|220947244|gb|ACL86165.1| CG16940-PA [synthetic construct]
gi|220956788|gb|ACL90937.1| CG16940-PA [synthetic construct]
Length = 1032
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 230/410 (56%), Gaps = 9/410 (2%)
Query: 223 AHVLHVFGRGGEVEPQINAILYENAIC-CSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 281
A ++ GR G ++ ++ AIL+ N + F + P + QE+L RKDLR
Sbjct: 494 AELIQPVGRVGNLDDELKAILFHNGLRDIKPFEQRFIDIYSQPPPPISQEDLRQRKDLRK 553
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
CIFTIDP TA DLDDA+SIE+L D +GVHI+DVS+F++ LD + RSTS+Y+
Sbjct: 554 MCIFTIDPMTARDLDDAVSIEKLGDNEYEIGVHISDVSHFLIEDNELDNIVKERSTSIYL 613
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW--IGRTVIRSCCKLSY 399
I MLP L SL PG D+ AFS+FW +N G ++ + RTVI SC + +Y
Sbjct: 614 ANEVIHMLPQSLCMRC-SLLPGQDKFAFSVFWRMNGKGVMLQKKPEFCRTVINSCSQFAY 672
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
EHAQ IID + + N +P + F D+ + L++++ ++ R +GAL
Sbjct: 673 EHAQKIIDNPNERFTEN----DFPTILNGFNPDDIRNRVLWLHDIASSIRKTRLDNGALT 728
Query: 460 LENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
+ N+K FL D G P + + + N L EEFMLLAN+ A I +FPD A+LR H
Sbjct: 729 INNAKLRFLLDPITGEPLSFEVEKQREANRLIEEFMLLANQAVARFIHDSFPDIAVLRNH 788
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 578
P P ++ L+ G +LD SSS +S+ + + + + L +PM
Sbjct: 789 PPPLIKSLKALREKLLALGFELDYSSSKALQESMVRLCNEAPNPVAMNACLSQLLMKPMA 848
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
A+YFCS + D HYAL+ P+YTHFTSP+RRYPD++VHR L AAL+
Sbjct: 849 RATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALK 898
>gi|261334833|emb|CBH17827.1| exosome complex exonuclease RRP44, putative [Trypanosoma brucei
gambiense DAL972]
Length = 943
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 222/700 (31%), Positives = 348/700 (49%), Gaps = 64/700 (9%)
Query: 80 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPT------KRPTGRVVSIIERSPRRDGI 133
P T + + N+ N L+ M+S+ PT K+P+G V++++ER
Sbjct: 165 PDGRRITRWIRDTTMNNRKNREMWLAEMMSA-PTEHNWHGKKPSGSVIAVLERKH----- 218
Query: 134 VGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKK 193
L V + + S++ + DR + + P + V +D+P S+++
Sbjct: 219 -PLLFVARLADDALSSQE---------VIQDRRFYRFKVFDQLLPHIAVFGRDIPFSLRE 268
Query: 194 RLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGF 253
+ E + +E W ES FP A ++ FG + AI + I F
Sbjct: 269 SIRERFYLLRLETTTGGDIVW-AESRFPTARIISTFGSVHSLRANTFAICSAHHIVTDDF 327
Query: 254 SPESLSCLP---CVPWEVPQEELLSRKDLR-NFCIFTIDPSTATDLDDALSIERLSDGIS 309
S E+ +C+P +P + + + R+DLR + +IDP+TA DLDDALSI L G
Sbjct: 328 SEEACNCIPDRLIIP-NLEEMKRTGRRDLRREEFVCSIDPATARDLDDALSITLLPGGY- 385
Query: 310 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 369
RVGVHIADVS+FV PG+ALD E + R+TSVY++ R PMLP LSEE SL+PG D+LAF
Sbjct: 386 RVGVHIADVSHFVSPGSALDEEGRARATSVYLVDRVYPMLPRKLSEEYCSLHPGSDKLAF 445
Query: 370 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 429
S + L+ G + W G++VIR+ C+LSY+ AQ IIDG + G +
Sbjct: 446 SAIFQLDLNGKLKGEWFGKSVIRNRCRLSYDDAQRIIDGNLTTLDALDYGGVTDRRELSQ 505
Query: 430 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSV---LSGREDL 486
V S+K L++++ L+ F G L + F F++ P + + + +
Sbjct: 506 LKERVATSVKHLFDLASKLRAASFERGRLAFSTPEIGFHFEDISNPTHPIGFNVHRQIEA 565
Query: 487 NFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSG 546
N+L EEFMLLAN A+ I + PD A+LR HP P + + ++ ++L G
Sbjct: 566 NWLVEEFMLLANLRVAQKIVQYLPDQAILRVHPPPKRVPFEQLKVSLARVNIEL----KG 621
Query: 547 QFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD-FKDDTDWGHYALAFPVYT 605
+ ++SLEQ ++ D+ L D + + LA Y +G+ F + GHYAL YT
Sbjct: 622 RSNKSLEQLLNSVR-DHPLRDEISIMVKNTLSLAKYCTNGENFTNKVPLGHYALGLEWYT 680
Query: 606 HFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAE 665
HFTSP+RRY D++VHR L ALE E + V+G+ TG K A
Sbjct: 681 HFTSPIRRYADIIVHRQLLCALEIESI----------------VKGKHRTG----KTCAG 720
Query: 666 SLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKK-KEVL 724
++ G E + + ++ +++ N+A CN+ K A +V +A +KL+ LK + +
Sbjct: 721 AV-GMEVECLDSAEFFTSTYEVM-NIADECNENKRAADSVSEASLKLFFCHYLKSLRSLW 778
Query: 725 LSEARVLALGPRFMTIYIEKLAIERRI--YYDEVEGLIVE 762
+S + PR + I +A E+++ Y V G+ VE
Sbjct: 779 VSSNKEDPFIPRVDAVVI-SVAPEKKVLMLYARVVGISVE 817
>gi|357517627|ref|XP_003629102.1| Exosome complex exonuclease [Medicago truncatula]
gi|355523124|gb|AET03578.1| Exosome complex exonuclease [Medicago truncatula]
Length = 1045
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 166/460 (36%), Positives = 250/460 (54%), Gaps = 38/460 (8%)
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
++PK+ + + L + + KR + +D W+ +S +P H + G+ G+
Sbjct: 491 RFPKIRIQTRQLENLLDKR------------IIVSVDSWDRQSRYPSGHYVRTVGKIGDK 538
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTAT 293
+ + +L EN I FS + L+CLP +PW V E+L R+DLR+ +F++DP
Sbjct: 539 DTETEVVLIENDINSRPFSAQVLACLPPLPWSVSSEDLSIPFRQDLRHLRVFSVDPPGCK 598
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL L +G VGVHIADV+ FV PGT LD EA R TSVY+++++I MLP L
Sbjct: 599 DIDDALHCIALPNGNFDVGVHIADVTNFVFPGTPLDDEASQRGTSVYLVEKRIDMLPKPL 658
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
+E+V SL V+RLAFS+ W++ D++ ++VI+S LSY AQ +D ++
Sbjct: 659 TEDVCSLRSDVERLAFSVIWEMTPEADIISTRYTKSVIKSAAALSYVEAQARMDDSRLMD 718
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
T ++++ ++K ++ +R +GAL L +++ F D E
Sbjct: 719 PVTT-------------------DLRNMNSLAKKMRLRRIENGALTLASAEVKFQIDTET 759
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P D + ++ N + EEFML AN + A+ I ++FP +LLRRHP P L
Sbjct: 760 HNPLDIGIYQIKEANQMVEEFMLAANVSVAQQILKSFPLCSLLRRHPTPTKEMLEPLLRV 819
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDT 592
+ GL LD SSS SL+ A + DD ++ TR M A YFCSGD
Sbjct: 820 SAAIGLNLDVSSSKALADSLDHA---VGDDPYFNKLIRILTTRCMSQAVYFCSGDLS-PP 875
Query: 593 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
++ HY LA P+YTHFTSP+RRY D++VHR L A++ KL
Sbjct: 876 EYHHYGLATPLYTHFTSPIRRYADVIVHRLLAASIGISKL 915
>gi|348688889|gb|EGZ28703.1| hypothetical protein PHYSODRAFT_358582 [Phytophthora sojae]
Length = 1092
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 192/545 (35%), Positives = 274/545 (50%), Gaps = 69/545 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG---SRKDAKKNRSSLSVPDREYIQLT 171
+P GRVV II+R+ W + G R A N S + +
Sbjct: 415 KPAGRVVGIIQRN--------------WRKFCGSLEPPRDGATLNASGSCL-------VV 453
Query: 172 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
P K PK+ + + + KR+ LVA ID W +S FP H + G
Sbjct: 454 PVDRKVPKIKIQTRQQETLMDKRV----------LVA--IDSWPADSKFPLGHYVRTLGV 501
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 291
G+ E + N +L E+ I C FS E + CLP W++ E R+DLR+ + +IDP
Sbjct: 502 IGDKETETNVLLIEHDIPCDQFSDEVMRCLPPEDWKITPENSTGRRDLRHLPVMSIDPPN 561
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
D+DDAL L +G +VGVHIADV++FV PG+ LD EA R TS Y++ R++ MLP
Sbjct: 562 CKDIDDALHARLLPNGNLQVGVHIADVTHFVAPGSPLDEEAADRGTSTYLVDRRLDMLPG 621
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGD----VVDRWIGRTVIRSCCKLSYEHAQDIID 407
LL+ ++ SL D AFS+ W+L GD V+D +++IRS LSY+ AQ+ +D
Sbjct: 622 LLTTKLCSLTDVEDHFAFSVLWELKLVGDNDVQVIDVSFCKSLIRSVASLSYQQAQEFLD 681
Query: 408 -----GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
G + +++ + + IK+L +++ L+ KR GAL L +
Sbjct: 682 DPNAGGVYGQDTNPKKKKKGETEKEFERKQLLGSGIKTLNVIARRLRAKRIEAGALTLAS 741
Query: 463 SKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
+ F+ D E P D + D N L EEFMLLAN T A+ I R FP ++LRRHPAP
Sbjct: 742 PEVRFVLDTETQNPLDVQMYTLRDTNALVEEFMLLANITVAKKIVRHFPTFSMLRRHPAP 801
Query: 522 NMRKLREFEAFCSKH---GLQLDTSSSGQFHQSLEQA----------------REKLKDD 562
+ R+F+ CS+ G++L +S Q SL+ A + K +
Sbjct: 802 SK---RQFDLLCSQAKAVGVELHVDTSKQLQDSLDAADILAQEEADGKNKGKRKHGGKSN 858
Query: 563 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
+L TR M ASYF SG+ ++ HY LA P+YTHFTSP+RRY D+VVHR
Sbjct: 859 PYFNKLLRIMTTRCMMPASYFSSGEVA-PPEFHHYGLAAPIYTHFTSPIRRYADVVVHRL 917
Query: 623 LNAAL 627
L AA+
Sbjct: 918 LAAAI 922
>gi|297836470|ref|XP_002886117.1| ribonuclease II family protein [Arabidopsis lyrata subsp. lyrata]
gi|297331957|gb|EFH62376.1| ribonuclease II family protein [Arabidopsis lyrata subsp. lyrata]
Length = 933
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 199/645 (30%), Positives = 308/645 (47%), Gaps = 111/645 (17%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP----DREYIQL 170
RP+GRVV +I R+ W +Y G + +S+P +
Sbjct: 336 RPSGRVVGVIRRN--------------WHSYCG--------SLEPMSLPAGSGGTAHALF 373
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
+ PK+ + + L + ++M +V A +D W+ +S +P H + G
Sbjct: 374 VSKDRRIPKIRINTRQLQN-----------LLDMRIVVA-VDSWDRQSRYPSGHYVRPIG 421
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTID 288
+ G+ E + +L EN + S FS + L+CLP +PW V E++ + R+DLR+ +F++D
Sbjct: 422 KIGDRETETEVVLIENDVDYSPFSSQVLACLPPLPWSVSPEDVSNPIRQDLRHLLVFSVD 481
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P D+DDAL L +G +GVHIADV+ FV PGT LD EA R TSVY+++R+I M
Sbjct: 482 PPGCKDIDDALHCTSLPNGNFELGVHIADVTNFVHPGTPLDDEASKRGTSVYLVERRIDM 541
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP L+E++ SL V+RLAFS+ W+++ +++ +++I+S LSY AQ +D
Sbjct: 542 LPKPLTEDICSLRADVERLAFSVIWEMSPDAEIISTRFTKSIIKSSAALSYVEAQARMDD 601
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 468
+S T ++++ ++KI++ +R GAL L +++ F
Sbjct: 602 SRLTDSLTT-------------------DLRNMNTLAKIMRQRRIDRGALTLASAEVKFQ 642
Query: 469 FD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
D E P D + + N + EEFML AN + A I + FP +LLRRHP P L
Sbjct: 643 IDTETHDPLDIGMYQIREANQMVEEFMLAANVSVAGQILKLFPSCSLLRRHPTPTREMLE 702
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 587
+ GL LD SSS SL++A + +D ++ ATR M A YFCSGD
Sbjct: 703 PLLRTAAAIGLTLDVSSSKALADSLDRA---VGEDPYFNKLIRILATRCMTQAVYFCSGD 759
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHRE 647
++ HY LA P+YTHFTSP+RRY D+ VHR L A+L K
Sbjct: 760 LT-PPEYHHYGLAAPLYTHFTSPIRRYADVFVHRLLAASLGIYK---------------- 802
Query: 648 GVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKD 707
L +F D+ L +VA + N R +
Sbjct: 803 ------LPTVFQDRPQ------------------------LTSVADNLNYRHRNAQMASR 832
Query: 708 ACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
A V+L+ I + + +EARV+ + +++ K IE +Y
Sbjct: 833 ASVELHTLIYFRNRPT-DAEARVVKIRSNGFIVFVPKYGIEGPVY 876
>gi|24654592|ref|NP_728490.1| CG16940, isoform C [Drosophila melanogaster]
gi|23092667|gb|AAN11425.1| CG16940, isoform C [Drosophila melanogaster]
gi|206597330|gb|ACI15759.1| FI04463p [Drosophila melanogaster]
Length = 1044
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 230/410 (56%), Gaps = 9/410 (2%)
Query: 223 AHVLHVFGRGGEVEPQINAILYENAIC-CSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 281
A ++ GR G ++ ++ AIL+ N + F + P + QE+L RKDLR
Sbjct: 506 AELIQPVGRVGNLDDELKAILFHNGLRDIKPFEQRFIDIYSQPPPPISQEDLRQRKDLRK 565
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
CIFTIDP TA DLDDA+SIE+L D +GVHI+DVS+F++ LD + RSTS+Y+
Sbjct: 566 MCIFTIDPMTARDLDDAVSIEKLGDNEYEIGVHISDVSHFLIEDNELDNIVKERSTSIYL 625
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW--IGRTVIRSCCKLSY 399
I MLP L SL PG D+ AFS+FW +N G ++ + RTVI SC + +Y
Sbjct: 626 ANEVIHMLPQSLCMRC-SLLPGQDKFAFSVFWRMNGKGVMLQKKPEFCRTVINSCSQFAY 684
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
EHAQ IID + + N +P + F D+ + L++++ ++ R +GAL
Sbjct: 685 EHAQKIIDNPNERFTEN----DFPTILNGFNPDDIRNRVLWLHDIASSIRKTRLDNGALT 740
Query: 460 LENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
+ N+K FL D G P + + + N L EEFMLLAN+ A I +FPD A+LR H
Sbjct: 741 INNAKLRFLLDPITGEPLSFEVEKQREANRLIEEFMLLANQAVARFIHDSFPDIAVLRNH 800
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 578
P P ++ L+ G +LD SSS +S+ + + + + L +PM
Sbjct: 801 PPPLIKSLKALREKLLALGFELDYSSSKALQESMVRLCNEAPNPVAMNACLSQLLMKPMA 860
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
A+YFCS + D HYAL+ P+YTHFTSP+RRYPD++VHR L AAL+
Sbjct: 861 RATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALK 910
>gi|51092105|gb|AAT94466.1| RE03681p [Drosophila melanogaster]
Length = 1044
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/410 (39%), Positives = 230/410 (56%), Gaps = 9/410 (2%)
Query: 223 AHVLHVFGRGGEVEPQINAILYENAIC-CSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 281
A ++ GR G ++ ++ AIL+ N + F + P + QE+L RKDLR
Sbjct: 506 AELIQPVGRVGNLDDELKAILFHNGLRDIKPFEQRFIDIYSQPPPPISQEDLRQRKDLRK 565
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
CIFTIDP TA DLDDA+SIE+L D +GVHI+DVS+F++ LD + RSTS+Y+
Sbjct: 566 MCIFTIDPMTARDLDDAVSIEKLGDNEYEIGVHISDVSHFLIEDNELDNIVKERSTSIYL 625
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW--IGRTVIRSCCKLSY 399
I MLP L SL PG D+ AFS+FW +N G ++ + RTVI SC + +Y
Sbjct: 626 ANEVIHMLPQSLCMRC-SLLPGQDKFAFSVFWRMNGKGVMLQKKPEFCRTVINSCSQFAY 684
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
EHAQ IID + + N +P + F D+ + L++++ ++ R +GAL
Sbjct: 685 EHAQKIIDNPNERFTEN----DFPTILNGFNPDDIRNRVLWLHDIASSIRKTRLDNGALT 740
Query: 460 LENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
+ N+K FL D G P + + + N L EEFMLLAN+ A I +FPD A+LR H
Sbjct: 741 INNAKLRFLLDPITGEPLSFEVEKQREANRLIEEFMLLANQAVARFIHDSFPDIAVLRNH 800
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 578
P P ++ L+ G +LD SSS +S+ + + + + L +PM
Sbjct: 801 PPPLIKSLKALREKLLALGFELDYSSSKALQESMVRLCNEAPNPVAMNACLSQLLMKPMA 860
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
A+YFCS + D HYAL+ P+YTHFTSP+RRYPD++VHR L AAL+
Sbjct: 861 RATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALK 910
>gi|335296984|ref|XP_003131067.2| PREDICTED: exosome complex exonuclease RRP44, partial [Sus scrofa]
Length = 740
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 182/523 (34%), Positives = 266/523 (50%), Gaps = 65/523 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 122 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 158
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + ID W S +P H + G
Sbjct: 159 DKRIPRI-------------RIETRQASTLEGRRIIVSIDGWPRNSRYPNGHFVKNLGEV 205
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 206 GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 265
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 266 TDIDDALHCRELENGDLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 325
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID
Sbjct: 326 LSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKASLTYAEAQMRIDSAAMN 385
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
+S + S++ L +++KILK +R GAL L + + F D E
Sbjct: 386 DS-------------------ITASLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 426
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 427 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 486
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
L++ T ++ SL++ + + + L+ ATR M A YFCSG
Sbjct: 487 AAKSKNLEIKTDTAKALADSLDRVDSPI---FPYLNTLLRILATRCMMQAVYFCSG---M 540
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 541 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 583
>gi|294938708|ref|XP_002782159.1| exosome complex exonuclease rrp44, putative [Perkinsus marinus ATCC
50983]
gi|239893657|gb|EER13954.1| exosome complex exonuclease rrp44, putative [Perkinsus marinus ATCC
50983]
Length = 982
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 192/571 (33%), Positives = 283/571 (49%), Gaps = 60/571 (10%)
Query: 79 HPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLN 138
H TS S+ N + AM + T IIE+ R +VG +
Sbjct: 269 HTPTSTSSNDDGDDDDNVAVLPTSGAEAMEERVLEEESTTPEGGIIEKEGR---VVGIIK 325
Query: 139 VNQWFNYKGGSRKDAKKNRSSLSVPDREY---------IQ--LTPTHPKYPKMVVLVKDL 187
N W Y G R ++ D+++ I+ P +P+ P + ++ K
Sbjct: 326 RN-WREYAGTLRPIQQEEEEQPQQGDKQHGGGMIGYSKIERIFIPANPRIPNIRIVTKHS 384
Query: 188 PDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENA 247
D R + +D W+ S PQ H + GR GE + + + IL+E+
Sbjct: 385 NDLDNMR------------ICVVMDTWDRTSRLPQGHWSRILGRCGERDTESSVILHEHN 432
Query: 248 ICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDG 307
+ FS + + CLP ++ +EE+ R DLRN + +IDP D+DDALS E L +G
Sbjct: 433 VITRDFSDDVMRCLPPKDFQPDEEEISRRLDLRNVTVCSIDPPGCKDIDDALSCEVLDNG 492
Query: 308 ISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRL 367
R+GVHIADV++FV P TA+D EA R T+VY+++R+ MLP LL+ ++ SL G DRL
Sbjct: 493 NWRIGVHIADVTHFVHPNTAIDKEAAERCTTVYLVERRTDMLPSLLTTDLCSLVGGKDRL 552
Query: 368 AFSIFWD--LNSAG------DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLG 419
FS+ W+ LN +V+ + +I S LSY AQ ID K D
Sbjct: 553 CFSVLWEFQLNKKNGNEEVLKIVNTQFHKAIINSNAALSYAEAQARIDDKNDN------- 605
Query: 420 EGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDS 478
SD+ +SI+ L + + I++ KR GAL L + + F D E P D
Sbjct: 606 ------------SDLTQSIRRLLKAAMIIRRKRMAGGALELASQEVRFELDSETSDPTDV 653
Query: 479 VLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGL 538
+D N L EEFMLLAN + AE I + FP +++LRRHP P ++L+ + K G+
Sbjct: 654 AEYTMKDTNRLVEEFMLLANTSVAEQILKHFPSNSVLRRHPPPKEQQLKSLRSLLEKQGV 713
Query: 539 Q-LDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGH 596
+ S+ + +SL K D Y F+ L+ TR M A YFC+G+ ++ + H
Sbjct: 714 KGFQFGSNRELSRSLNTVCNKKDDPY--FNRLVRIMTTRTMNQAQYFCTGEVENGM-FSH 770
Query: 597 YALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
Y LA +YTHFTSP+RRY D++VHR L A+L
Sbjct: 771 YGLAMGLYTHFTSPIRRYADILVHRLLMASL 801
>gi|342185942|emb|CCC95427.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 870
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 219/689 (31%), Positives = 335/689 (48%), Gaps = 71/689 (10%)
Query: 89 VSSSQQNDGMNAIERLSAMISS-----YPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 143
V S+++ G N L+ + + + KRP+GRVV +I+R V +
Sbjct: 111 VRDSREDGGRNLEVHLAKAMGAPAEYRWGNKRPSGRVVKVIQRKQ------ALTVVARLA 164
Query: 144 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 203
+ G R+ + NR Y + + +P + V +D+P + + +++ ++
Sbjct: 165 DGALGPREPIQDNR---------YYRFKVYNELFPHIAVYGRDIPSCLYEAIDKQMYILQ 215
Query: 204 MELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
+ W ++ FP A V V G VE AI + I FS E+ +C+P
Sbjct: 216 LSTQPNGDFVWKDDR-FPLAKVTRVVGSVESVESNTYAICTAHDIPMCDFSEEAYACVPD 274
Query: 264 VPWEVPQEELLSR---KDLRNF-CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 319
+ +P E + R +DLR+ + +IDPSTA DLDDALSI L G RVGVHIADVS
Sbjct: 275 T-FVIPDAEEMKRTHRRDLRSEEFVCSIDPSTARDLDDALSITALPGGY-RVGVHIADVS 332
Query: 320 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 379
+FV PG+ALD EA+ R+TSVY++ R IPMLP LSE+ SL+PG D+LAFS + +
Sbjct: 333 HFVQPGSALDEEARTRATSVYLVDRVIPMLPRRLSEDYCSLHPGSDKLAFSAIFQFDHHA 392
Query: 380 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 439
++ W G+++IR+ C+LSY+ AQ IIDG V + G+ + S++
Sbjct: 393 NLKGEWFGKSLIRNRCRLSYDDAQRIIDGDDAVLDTLDYGDARDAQELVSLKARTATSVR 452
Query: 440 SLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT---PYDSVLSGREDLNFLFEEFMLL 496
+L+E++ L+ G + + ++K F F++ P + + + N+L EEFMLL
Sbjct: 453 TLFELATKLRSASIKRGRVTISSAKISFHFEDAMNATHPIGFDIKRQIEANWLVEEFMLL 512
Query: 497 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR 556
AN AE I PD LLR HP+P R + S+ G+ L +G+ + +Q
Sbjct: 513 ANARVAEKIIEYSPDQGLLRTHPSPPQRTFVALKRILSRAGIDL----TGRSSHAYQQVT 568
Query: 557 EKLKDDYVLFDILINYATRPMQLASYFCSGDFK-DDTDWGHYALAFPVYTHFTSPLRRYP 615
+K+ D+ L D L + LA Y +GD T H+ALA YTHFTSP+RRY
Sbjct: 569 DKIC-DHPLRDELSALMKYGLTLAKYVANGDTGLGTTSRRHFALALEWYTHFTSPIRRYA 627
Query: 616 DLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSV 675
D++VHR L ALE E + +G RG + L+ R
Sbjct: 628 DIIVHRQLLCALEIESIV-------------KGSRGSRAHPVEPGSVEVSDLQTR----- 669
Query: 676 AALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLS--------- 726
+ P +++ N+ CN +KL RNV DA L++ K L
Sbjct: 670 ---PFFTPTVEMM-NIVEECNAKKLLARNVSDASSALFLCQYYKSLRALWGSTSGGKPFI 725
Query: 727 ---EARVL-ALGPRFMTIYIEKLAIERRI 751
E VL + + T+Y+++LA+E I
Sbjct: 726 PRVEVTVLRTISNKLFTLYVKELAVEVEI 754
>gi|198429347|ref|XP_002132066.1| PREDICTED: similar to RIKEN cDNA 2810028N01 [Ciona intestinalis]
Length = 920
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 181/520 (34%), Positives = 259/520 (49%), Gaps = 58/520 (11%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTG+VV II+RS W Y G S P+ TP
Sbjct: 313 PTGKVVGIIKRS--------------WRPYCG--------ILESFGSPEMTRHLFTPAEK 350
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ P++ + + I +R + ID W S +PQ H + G G+
Sbjct: 351 RIPRIRIETRQAKTLIGQR------------IVVAIDSWPRFSKYPQGHFVKALGSVGDK 398
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
+ + +L E+ + FS L+CLP W +P+EE R+D R+ I ++DP TD+
Sbjct: 399 DTENEVLLLEHDVAHEPFSQAVLNCLPPSDWSIPKEEFAVREDFRDLPICSVDPPGCTDI 458
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DD L + L DG VGVHIADV++F+ PGT +D EA R TSVY+ ++I M+P LLS
Sbjct: 459 DDCLHHKDLGDGTVEVGVHIADVTHFIRPGTPIDNEAATRGTSVYLCDKRIDMVPELLSS 518
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+ SL DRLAFS W + ++V ++VIRS ++Y AQ ID K +
Sbjct: 519 NLCSLRDDGDRLAFSCIWIMKPNAEIVSTRFCKSVIRSKSSMTYAQAQMQIDDK-TAKDP 577
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
T+G ++ L +++KILK R GAL L + + F D E
Sbjct: 578 VTMG------------------LRGLNKLAKILKHDRIEKGALSLSSPEVRFHVDSETHD 619
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P D D N + EEFMLLAN + A+ I + FP+ A+LRRHP P F
Sbjct: 620 PIDLQNKELRDTNSMVEEFMLLANCSVAKKIQQEFPECAVLRRHPEPPQSNFDVFLNAAK 679
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTD 593
GL+L+ ++S SL++ E + + L+ ATR M A YFCSG ++D
Sbjct: 680 SRGLELNAATSRDLAVSLDRTEEPKEGIHSYISTLLRILATRCMMQAVYFCSG---LESD 736
Query: 594 WGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
+ HY LA P+YTHFTSP+RRY D++VHR L A++ A+K +
Sbjct: 737 FRHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADKTF 776
>gi|196006233|ref|XP_002112983.1| hypothetical protein TRIADDRAFT_25898 [Trichoplax adhaerens]
gi|190585024|gb|EDV25093.1| hypothetical protein TRIADDRAFT_25898 [Trichoplax adhaerens]
Length = 931
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 183/521 (35%), Positives = 262/521 (50%), Gaps = 61/521 (11%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN--RSSLSVPDREYIQLTPT 173
P+G+VV II+R+ W Y G + N R DR
Sbjct: 334 PSGKVVGIIKRN--------------WRPYCGILLPNPNPNARRFLFRAADR-------- 371
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ P++ +L + + + +R + +D W + +P+ H + G G
Sbjct: 372 --RIPRIRILTRQSSNLLGQR------------IIVSVDAWQRKRRYPEGHFVRRLGPIG 417
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ E + +L E+ + FS L+ LP +PWE+ ++ R+DLR+ I +IDP T
Sbjct: 418 DKETESEVLLIEHNVPYQQFSQAVLNDLPTLPWEITDDDAKQREDLRHLTICSIDPPGCT 477
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL + L +G VGVHIADVS+F+ PGTA+DIEA R T+VY+ +++I M+P LL
Sbjct: 478 DIDDALHLTALENGNYEVGVHIADVSHFIRPGTAIDIEAANRGTTVYLAEKRIDMVPELL 537
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL VDR AFS W+L+ DV+ +++I+S +Y AQ IID K
Sbjct: 538 SSNLCSLRSNVDRFAFSCIWELSPDADVIAARFTKSIIKSQAAFTYAEAQLIIDDK---- 593
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
N D+ S++SL +++ L KR GAL L + + F D E
Sbjct: 594 QRN---------------DDIAISLRSLNVLAQALNKKRLDQGALSLASPEIRFQVDSET 638
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P + V + N L EEFMLLAN T AE I FP ALLRRHP+P +
Sbjct: 639 HDPLELVKKELRETNSLVEEFMLLANITVAERIYEIFPQCALLRRHPSPPLSNFDILLKS 698
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDT 592
+ +QL S+ SL QA L+D+ +L TR M A YFCSG
Sbjct: 699 AAVKNIQLQVDSAKMLSTSLAQA--DLQDNPYFNTLLRILVTRCMMQAVYFCSGTLAYQ- 755
Query: 593 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L ++ A+K Y
Sbjct: 756 DYCHYGLATPIYTHFTSPIRRYSDIIVHRLLAISIGADKTY 796
>gi|281347338|gb|EFB22922.1| hypothetical protein PANDA_002191 [Ailuropoda melanoleuca]
Length = 955
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 203/657 (30%), Positives = 323/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + KG + K + + I +TP
Sbjct: 233 PTGRVVGILQKN-WRDYVVTFPS-------KGEVQSQGK---------NAQKILVTPWDY 275
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 276 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 323
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V EE RKDLR +F+IDP
Sbjct: 324 EGEIATILVENSISVVPFSEAQMCEMPVNTPGNPWKVSPEEERERKDLRETHLVFSIDPK 383
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 384 GCEDVDDTLSVRTLANGNLELGVHIADVTHFVPPNSYIDIEARTRATTYYLADRRYDMLP 443
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GV R A S+ W+L+ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 444 SVLSADLCSLLGGVHRYAVSVIWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 503
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 504 FHAVDDIPEFRDLDERSRQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEIRVQL 563
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 564 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 623
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 624 RECAKAKGFFIDTRSNKTLADSLDNAND--PNDPIVNRLLRSMATQAMSNALYFSTGSCA 681
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M K+N
Sbjct: 682 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK------KMEIKDN----- 729
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 730 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 757
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 758 TELFQCMYFKDKDPENEERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLRNKDGLVI 814
>gi|332235946|ref|XP_003267166.1| PREDICTED: DIS3-like exonuclease 1 isoform 2 [Nomascus leucogenys]
Length = 971
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 205/657 (31%), Positives = 324/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 290 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 337
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 338 EGEIATILVENNISVIPFSEAQMCEMPVNTPENPWKVSPEEEQKRKDLRKSHLVFSIDPK 397
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 457
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 518 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 577
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 578 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 637
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 695
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M K N
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK------KMEIKGN----- 743
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 744 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 771
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 772 TELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVI 828
>gi|291233829|ref|XP_002736854.1| PREDICTED: mKIAA1955 protein-like [Saccoglossus kowalevskii]
Length = 989
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 194/549 (35%), Positives = 288/549 (52%), Gaps = 44/549 (8%)
Query: 89 VSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG 148
+S ++ ++G IE AMI S PTGRV+ I++R+ W +Y
Sbjct: 304 ISLTETHEG---IENTEAMIDS-SNVMPTGRVIGILQRN--------------WRDYVAS 345
Query: 149 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVA 208
D K+N+ + S + + + P + PK+ + + DS+ GD V
Sbjct: 346 FSAD-KENKGNTSKAGK--VLVIPWDYRIPKIRISTRQ-SDSL------GD-----HRVI 390
Query: 209 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV---- 264
RID W +S +P H + G G++E +I++IL EN+I FS + LP
Sbjct: 391 VRIDSWPVDSQYPNGHFVQTLGSIGKLETEISSILVENSISIRSFSEGQIKELPSNSSDD 450
Query: 265 PWEVPQEELLSRKDLRN-FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
PW + EE+ R+DLR+ IF+IDP D+DD LS+ +L +G +GVHIADVSYFV
Sbjct: 451 PWTIDPEEVARRQDLRDSHLIFSIDPKGCEDVDDTLSVRQLPNGNIELGVHIADVSYFVK 510
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
P + D+EA+ R+T+VY+ R+ MLP +LS ++ SL G DR A S+ W L+ DV+D
Sbjct: 511 PNSLTDLEAKSRATTVYLADRRYDMLPPILSADLCSLIGGEDRYAMSVLWQLSPNYDVID 570
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
W GRTVIRS K+ YE AQ + DGK DV EG + Q ++ SI +L
Sbjct: 571 VWYGRTVIRSAYKMFYEAAQALHDGK-DVRDDIPELEGLDEEVIQERLRELNFSISTLMS 629
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+++ LK KR + GA++LE + + D V +++ E M+ AN A+
Sbjct: 630 IARHLKSKRESGGAVQLEGLEIQVQLSDKKDIQDLVPKQALEIHETIAECMIFANHWVAK 689
Query: 504 VIARAFPDSALLRRHPAPNMRKLREFEAFCSK-HGLQLDTSSSGQFHQSLEQAREKLKDD 562
I AFP ALLR HP P +C+K G +DTS++ SL++ + + +
Sbjct: 690 KITEAFPSFALLRHHPLPRQEHFENL-LYCAKSKGFSVDTSTNKNLADSLDRCVD--EKN 746
Query: 563 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
+ +L AT M A YF +G D + HY LA YTHFTSP+RRY D++VHR
Sbjct: 747 PIFNKLLRTLATYAMSNALYFSTGSLSRD-QFYHYGLALDRYTHFTSPIRRYADIIVHRL 805
Query: 623 LNAALEAEK 631
L AA++ ++
Sbjct: 806 LMAAIKEDE 814
>gi|301756943|ref|XP_002914328.1| PREDICTED: DIS3-like exonuclease 1-like [Ailuropoda melanoleuca]
Length = 1046
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 203/657 (30%), Positives = 323/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + KG + K + + I +TP
Sbjct: 322 PTGRVVGILQKN-WRDYVVTFPS-------KGEVQSQGK---------NAQKILVTPWDY 364
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 365 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 412
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V EE RKDLR +F+IDP
Sbjct: 413 EGEIATILVENSISVVPFSEAQMCEMPVNTPGNPWKVSPEEERERKDLRETHLVFSIDPK 472
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 473 GCEDVDDTLSVRTLANGNLELGVHIADVTHFVPPNSYIDIEARTRATTYYLADRRYDMLP 532
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GV R A S+ W+L+ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 533 SVLSADLCSLLGGVHRYAVSVIWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 592
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 593 FHAVDDIPEFRDLDERSRQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEIRVQL 652
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 653 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 712
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 713 RECAKAKGFFIDTRSNKTLADSLDNAND--PNDPIVNRLLRSMATQAMSNALYFSTGSCA 770
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M K+N
Sbjct: 771 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK------KMEIKDN----- 818
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 819 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 846
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 847 TELFQCMYFKDKDPENEERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLRNKDGLVI 903
>gi|440907164|gb|ELR57340.1| Exosome complex exonuclease RRP44 [Bos grunniens mutus]
Length = 960
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 267/523 (51%), Gaps = 65/523 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 342 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 378
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+E + +D W S +P H + G
Sbjct: 379 DKRIPRI-------------RIETRQASTLEGRRIIVAVDGWPRNSRYPNGHFVKNLGEV 425
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 426 GDKETETEVLLLEHDVPHQAFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 485
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 486 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 545
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++ +++ ++VI S L+Y AQ ID
Sbjct: 546 LSSNLCSLRSNVDRLAFSCIWEMTHNAEILKTRFTKSVINSKASLTYAEAQMRID----- 600
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S + + ++ S++ L +++KILK R GAL L + + F D E
Sbjct: 601 --SAAMND------------NITTSLRGLNKLAKILKKGRIEKGALTLSSPEVRFHMDSE 646
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 647 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 706
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
L++ T ++ SL++A + + + L+ ATR M A YFCSG
Sbjct: 707 AAKSKNLEIKTDTAKALADSLDRADSPI---FPYLNTLLRILATRCMMQAVYFCSG---M 760
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 761 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 803
>gi|195151845|ref|XP_002016849.1| GL21852 [Drosophila persimilis]
gi|194111906|gb|EDW33949.1| GL21852 [Drosophila persimilis]
Length = 978
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 267/522 (51%), Gaps = 59/522 (11%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
+ PTGR+V I+ R +W Y G + +N + +I P
Sbjct: 348 RTPTGRIVGIVRR--------------KWRQYCGILQPSLIENTN-------RHI-FVPA 385
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
K P++ + + A ++ + + ID W S +PQ H + G G
Sbjct: 386 DRKIPRIRIETRQA------------AKLQNQRIIVTIDTWPRNSRYPQGHFVRSLGPLG 433
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
++ + IL E+ + FS E LS LP +PW + E+ R DLR I ++DP T
Sbjct: 434 DMATENEVILLEHDVPHCKFSEEVLSFLPKLPWSITAEDYAKRVDLRELDICSVDPPGCT 493
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+VY++ ++I M+P LL
Sbjct: 494 DIDDALHCRELPNGNFEVGVHIADVSHFIRPGNALDKEAAARGTTVYLVGKRIDMVPELL 553
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL GV+R AFS W+++ +V+D+ ++VI+S ++YE AQ +ID
Sbjct: 554 SSNLCSLVGGVERFAFSCVWEVDKEANVIDKRFHKSVIKSKRAMTYEEAQVLIDDA---- 609
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
+ S++ +S++ L ++KILK +R +GAL L + + F D E
Sbjct: 610 ---------------TQQSEIAKSLRHLNRLAKILKKRRMDNGALVLASPEIRFQVDSET 654
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P + + N + EEFMLLAN T AE IA F + A+LRRHP P
Sbjct: 655 HEPLEVEAKQMRETNSMVEEFMLLANITVAEHIAAEFTECAVLRRHPKPPPTNFDPLVKA 714
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 591
G Q+DT + SL++ +K+D F+ +I TR M A YF SG + +
Sbjct: 715 ARYQGFQVDTETGLVLSHSLDKC---VKEDNPYFNTMIRILTTRCMMQAVYFISGSLQKE 771
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
++ HY LA P+YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 772 -EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 812
>gi|197100203|ref|NP_001126723.1| DIS3-like exonuclease 1 [Pongo abelii]
gi|75041135|sp|Q5R5N8.1|DI3L1_PONAB RecName: Full=DIS3-like exonuclease 1
gi|55732455|emb|CAH92928.1| hypothetical protein [Pongo abelii]
Length = 1054
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 205/657 (31%), Positives = 324/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 373 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 421 EGEIATILVENSISVIPFSEAQMCEMPVNTPENPWKVSPEEEQKRKDLRKSHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNANG--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M K N
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK------KMEIKGN----- 826
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 827 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 854
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 855 TELFQCMYFKDKDPATEERCISDGVIYSIRANGVLVFIPRFGIKGAAYLKNKDGLVI 911
>gi|195331604|ref|XP_002032491.1| GM26588 [Drosophila sechellia]
gi|194121434|gb|EDW43477.1| GM26588 [Drosophila sechellia]
Length = 989
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 276/546 (50%), Gaps = 60/546 (10%)
Query: 90 SSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGS 149
S + D + ++++ A SS + PTGR+V I+ R +W Y G
Sbjct: 323 SEEKATDENDMLKQVRAAASS-AERTPTGRIVGIVRR--------------KWRQYCGIL 367
Query: 150 RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAA 209
+ + D P K P++ + + A ++ + +
Sbjct: 368 QPSL--------IEDTNRHIFVPADRKIPRIRIETRQA------------AKLQNQRIIV 407
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP 269
ID W S +P H + G G++ + IL E+ + FS E LS LP +PW +
Sbjct: 408 TIDTWPRNSRYPHGHFVRSLGPLGDMATENEVILLEHDVPHCKFSDEVLSFLPKMPWTIT 467
Query: 270 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 329
E+ R DLR+ I ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD
Sbjct: 468 DEDYSKRVDLRDLFICSVDPPGCTDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNALD 527
Query: 330 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 389
+EA R T+VY++ ++I M+P LLS + SL GV+R AFS W++++ +V+ + ++
Sbjct: 528 MEAAARGTTVYLVGKRIDMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLGKRFHKS 587
Query: 390 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 449
VI+S ++YE AQ IID D N ++ +S++ L ++KILK
Sbjct: 588 VIKSKRAMTYEEAQSIID---DATQQN----------------EIAKSLRHLNRLAKILK 628
Query: 450 DKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
+R +GAL L + + F D E P + + + N + EEFMLLAN T AE IA
Sbjct: 629 KRRMDNGALVLASPEIRFQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIATE 688
Query: 509 FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 568
F + A+LRRHP P G Q+D S + SL++ +K D F+
Sbjct: 689 FSECAVLRRHPRPPPTNFDPLVKSARYQGFQVDIESGLELSHSLDKC---VKADNPYFNT 745
Query: 569 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
+I TR M A YF SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A++
Sbjct: 746 MIRILTTRCMMQAVYFISGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASI 804
Query: 628 EAEKLY 633
A+ Y
Sbjct: 805 GADSTY 810
>gi|395822371|ref|XP_003784492.1| PREDICTED: DIS3-like exonuclease 1 [Otolemur garnettii]
Length = 1053
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 208/661 (31%), Positives = 327/661 (49%), Gaps = 94/661 (14%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSLYPNGHFVRVLGRIGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 290
E +I IL EN+I FS + +P PW+V EE RKDLR+ +F+IDP
Sbjct: 421 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPEEEQERKDLRHTHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L +G +GVHIADV++FV + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLKNGNLELGVHIADVTHFVALNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLCYEAAQELLDGN 600
Query: 410 F----DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
F D+ L E Q GQ E ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FGVVDDIPEFKNLDEKSRQ--GQLE--ELVWAIGKLTDIARHVRAKRDRCGALELEGVEV 656
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
DE +D + +++ E M+LAN A+ I +FP ALLR+HP P+
Sbjct: 657 RVQLDEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEF 716
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
E G +DT S+ SL+ A + D ++ +L + AT+ M A YF +
Sbjct: 717 FSELRECAKAKGFFIDTRSNKTLADSLDNAND--PSDPIVNRLLRSMATQAMSNALYFST 774
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNH 645
G ++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K +M K N
Sbjct: 775 GSCAEE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDK------KMETKEN- 826
Query: 646 REGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNV 705
+ +KD E + H N+R A ++
Sbjct: 827 -----------LLSNKDLEE-------------------------LCRHINNRNRAAQHS 850
Query: 706 KDACVKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLI 760
+ +L+ + K K E +S+ + ++ + ++I + I+ Y +GL+
Sbjct: 851 QKQSTELFQCMYFKDKDLETDERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDGLV 910
Query: 761 V 761
+
Sbjct: 911 I 911
>gi|354493394|ref|XP_003508827.1| PREDICTED: DIS3-like exonuclease 1-like [Cricetulus griseus]
Length = 1054
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 199/657 (30%), Positives = 324/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWETTSVYPNGHFVRVLGRIGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +E RKDLRN +F+IDP
Sbjct: 421 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEERERKDLRNTHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F + + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FSIVDDIPEFKALEEQSRQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDSAND--PSDPMVNKLLRSMATQAMSNALYFSTGSCA 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK------------------ 819
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+ +F +KD E + H N+R A ++ +
Sbjct: 820 KMEMKESLFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 854
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K + E +++ + ++ + ++I + I+ Y +GL++
Sbjct: 855 TELFQCMYFKDRDPETEERCMADGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDGLVI 911
>gi|332235944|ref|XP_003267165.1| PREDICTED: DIS3-like exonuclease 1 isoform 1 [Nomascus leucogenys]
Length = 1054
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 205/657 (31%), Positives = 324/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 373 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 421 EGEIATILVENNISVIPFSEAQMCEMPVNTPENPWKVSPEEEQKRKDLRKSHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 LSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQAMSNALYFSTGSCA 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M K N
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK------KMEIKGN----- 826
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 827 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 854
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 855 TELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVI 911
>gi|148229076|ref|NP_001088180.1| DIS3 mitotic control homolog [Xenopus laevis]
gi|54035109|gb|AAH84092.1| LOC495005 protein [Xenopus laevis]
Length = 953
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 280/545 (51%), Gaps = 65/545 (11%)
Query: 94 QNDGMNAIERLSAMISSY--PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SR 150
+ND + ++E M++S K+P+G+VV II+R+ W Y G S+
Sbjct: 312 ENDDIESVEEKEKMLTSAVNSAKKPSGKVVGIIKRN--------------WRPYCGMLSK 357
Query: 151 KDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAAR 210
K++ L TP + P++ + + +T+E + +
Sbjct: 358 SQIKESTRHL---------FTPAERRIPRIRIETRQ------------SSTLEGQRIIVA 396
Query: 211 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 270
+D W + S +P H + G G+ + +L E+ + FS LS LP +PW +
Sbjct: 397 VDGWPKNSRYPNGHFVKSLGTAGDKATETEVLLLEHDVPHQPFSQTVLSFLPKMPWNITP 456
Query: 271 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 330
E++ +R DLR+ + ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD
Sbjct: 457 EDMKNRIDLRHLYVCSVDPPGCTDIDDALHCRELENGTLEVGVHIADVSHFIRPGNALDQ 516
Query: 331 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 390
EA R T+VY+ ++I M+P LLS + SL VDRLAFS W+++ +++ ++V
Sbjct: 517 EAANRGTTVYLCDKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMDENANILKTKFTKSV 576
Query: 391 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 450
I S L+Y AQ ID S T+ + ++ +S++ L +++KILK
Sbjct: 577 INSKASLTYAEAQMRID-------SPTMND------------EITQSLRFLNKLAKILKK 617
Query: 451 KRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 509
+R +GAL L + + F D E P D ++ N + EEFMLLAN + A+ I F
Sbjct: 618 QRINNGALTLSSPEVRFHMDSETHDPIDLQTKELKETNSMVEEFMLLANISVAQKIFDEF 677
Query: 510 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 569
+ ALLR+HP+P L++ T + SL++A + ++ + L
Sbjct: 678 SEYALLRKHPSPPPANYDILVKAAQSKNLEIKTDCAKALADSLDKAESQ---EFPYLNTL 734
Query: 570 IN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
+ ATR M A YFCSG DTD+ HY LA P+YTHFTSP+RRY D++VHR L A+
Sbjct: 735 LRILATRCMMQAVYFCSG---MDTDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAVG 791
Query: 629 AEKLY 633
A+ Y
Sbjct: 792 ADCTY 796
>gi|194909762|ref|XP_001982004.1| GG11280 [Drosophila erecta]
gi|190656642|gb|EDV53874.1| GG11280 [Drosophila erecta]
Length = 982
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 184/546 (33%), Positives = 276/546 (50%), Gaps = 60/546 (10%)
Query: 90 SSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGS 149
S + D + ++++ A SS + PTGR+V I+ R +W Y G
Sbjct: 323 SEERAEDEKDMLKQVRASASS-AERTPTGRIVGIVRR--------------KWRQYCGIL 367
Query: 150 RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAA 209
+ + D P K P++ + + A ++ + +
Sbjct: 368 QPSL--------IEDTNRHIFVPADRKIPRIRIETRQA------------AKLQNQRIIV 407
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP 269
ID W S +P H + G G++ + IL E+ + FS E LS LP +PW++
Sbjct: 408 TIDTWPRNSRYPHGHFVRSLGPLGDMATENEVILLEHDVPHCKFSDEVLSFLPKMPWKIT 467
Query: 270 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 329
+E+ R DLR+ I ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD
Sbjct: 468 EEDYAKRVDLRDLYICSVDPPGCTDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNALD 527
Query: 330 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 389
EA R T+VY++ ++I M+P LLS + SL GV+R AFS W++++ +V+ + ++
Sbjct: 528 KEAAARGTTVYLVGKRIDMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLGKRFHKS 587
Query: 390 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 449
VI+S ++YE AQ IID D N L +S+++L ++KILK
Sbjct: 588 VIKSKRAMTYEEAQVIID---DATQQNELA----------------KSLRNLNRLAKILK 628
Query: 450 DKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
+R GAL L + + F D E P + + + N + EEFMLLAN T AE IA
Sbjct: 629 KRRMDSGALVLASPEIRFQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIATE 688
Query: 509 FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 568
F + A+LRRHP P G Q+D S + SL++ +K D F+
Sbjct: 689 FSECAVLRRHPRPPPTNFDPLVKAARYQGFQVDIESGLELSHSLDKC---VKADNPYFNT 745
Query: 569 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
+I TR M A YF SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A++
Sbjct: 746 MIRILTTRCMMQAVYFISGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASI 804
Query: 628 EAEKLY 633
A+ Y
Sbjct: 805 GADSTY 810
>gi|118084745|ref|XP_417016.2| PREDICTED: exosome complex exonuclease RRP44 [Gallus gallus]
Length = 963
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 200/590 (33%), Positives = 295/590 (50%), Gaps = 82/590 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RPTG+VV II+R+ R G L S+ K+ R L +P I
Sbjct: 343 RPTGKVVGIIKRNWR--PFCGML-----------SKSQIKEARRHLFIPADRSI------ 383
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
P++ R+E A +E + + ID W S +P H + G G
Sbjct: 384 ---PRI-------------RIETRQADKLEGQRIIVAIDGWPRNSRYPNGHFVKNLGSAG 427
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ E + +L E+ + FS LS LP +PW + ++++ R+DLR+ + ++DP T
Sbjct: 428 DKETETEVLLLEHDVPHQPFSQNVLSFLPKMPWSITEKDMKYREDLRHLYVCSVDPPGCT 487
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL + +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P LL
Sbjct: 488 DIDDALHCREIENGNLEVGVHIADVSHFIRPGNALDEESARRGTTVYLCEKRIDMVPELL 547
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL VDRLAFS W++N +++ +++I S L+Y AQ ID
Sbjct: 548 SSNLCSLRSNVDRLAFSCIWEMNQKAEILKTRFTKSIINSKASLTYAEAQMRID------ 601
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
S + + D+ S++ L +++KILK KR +GAL L + + F D E
Sbjct: 602 -SAAMND------------DITVSLRGLNKLAKILKKKRIDNGALTLSSPEVRFHMDSET 648
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P D + N + EEFMLLAN + A+ I FP+ ALLR+HPAP
Sbjct: 649 HDPIDLQTKELRETNSMVEEFMLLANVSVAQKIYDEFPEFALLRKHPAPPPSNYDILVKA 708
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 591
L++ T S+ +SL++A D+ + L+ TR M A YFCSG D
Sbjct: 709 AKSKNLEIKTDSAKALAESLDKAESP---DFPYLNTLLRILTTRCMMQAVYFCSG---MD 762
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYW----KHRRM-LPKN-NH 645
+D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y KH+ L KN N+
Sbjct: 763 SDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADSTYPELTDKHKLADLCKNLNY 822
Query: 646 REGVRG-------RFLTGIFY------DKDAAESLEGREALSVAALKYGV 682
R + F T +F+ ++DA R A+ V KYG+
Sbjct: 823 RHKMAQYAQRASVAFHTQLFFKTKGVVNEDAYILFVRRNAVVVLIPKYGL 872
>gi|410960990|ref|XP_003987069.1| PREDICTED: DIS3-like exonuclease 1 [Felis catus]
Length = 996
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 202/657 (30%), Positives = 322/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 272 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 314
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + T++ V RID W S +P H + V GR G++
Sbjct: 315 RIPKIRISTQQA------------ETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDL 362
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V EE R+DLR +F+IDP
Sbjct: 363 EGEIATILVENSISVVPFSEAQMCEMPVNTPGNPWKVSPEEERERQDLRKTHLVFSIDPK 422
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L +G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 423 GCEDVDDTLSVRSLDNGHLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 482
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
LS ++ SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 483 SALSADLCSLLGGVDRYAVSVIWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 542
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F++ + Q ++ +I L ++++ ++ KR GAL LE +
Sbjct: 543 FNIVDDIPEFRDLDEKTRQARLEELAWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 602
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 603 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 662
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 663 RECAKAKGFFIDTRSNKTLADSLDNAND--PNDPIVNRLLRSMATQAMSNALYFSTGSCA 720
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M K+N
Sbjct: 721 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAIAKDK------KMEIKDN----- 768
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 769 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 796
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 797 TELFQCMYFKDKDPENEERCISDGVIYSIRTNGVLLFIPRFGIKGAAYLKNKDGLVI 853
>gi|388580087|gb|EIM20404.1| RNB-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 939
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 200/559 (35%), Positives = 286/559 (51%), Gaps = 69/559 (12%)
Query: 90 SSSQQ--NDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKG 147
SSS Q +D N + ++SS +PTG+VV II+R QW +Y
Sbjct: 295 SSSDQVIDDDENDLNPAEQILSSDDNVQPTGKVVGIIKR--------------QWRSYVC 340
Query: 148 GSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELV 207
K S+ S ++ + ++P + PK IK + + I+ ++V
Sbjct: 341 HLDKSTITTSSNQS---QQTVFVSPIDRRIPK-----------IKIKTRQASNLIDQKVV 386
Query: 208 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVP 265
A ID+WN S +PQ H + G+ E +I ++L E + FS L+CLP
Sbjct: 387 VA-IDQWNINSRYPQGHFVRALGKVESKEAEIESLLLEYDVPYRAFSKSILNCLPPEGES 445
Query: 266 WEVPQEELLS-----RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 320
W VP ++ + R DLR+ I +IDP TD+DDAL + L +G GVHIADVS+
Sbjct: 446 WTVPSKDSTNPIWKDRVDLRDEVICSIDPPGCTDIDDALHAKYLPNGNIEAGVHIADVSH 505
Query: 321 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGD 380
FV P T +D+EA R T+VY++ ++I MLP LL + SL P V+RLAFS+ W+LNS +
Sbjct: 506 FVHPDTTMDLEAASRGTTVYLVDKRIDMLPSLLGTNLCSLRPHVERLAFSVIWELNSNAE 565
Query: 381 VVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKS 440
+VD ++VI S +YE AQ D K +L + + +I+
Sbjct: 566 IVDIKFHKSVIASKSAFTYEEAQLRKDDK-------SLNDP------------LTVAIRL 606
Query: 441 LYEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLAN 498
L ++ LK KR GAL L + + D E P D ++ N L EEFMLLAN
Sbjct: 607 LNHIAIQLKQKRLERGALDLASPEVKIHLDSSESTEPIDVEQKESKETNKLVEEFMLLAN 666
Query: 499 KTAAEVIARAFPDSALLRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQA 555
T A I FP +++LRRH P N L+E + L LD SSSG +SL+
Sbjct: 667 CTVATKINETFPGTSVLRRHLPPPKQNFEGLQEI--LFKRKNLNLDVSSSGALAKSLDNC 724
Query: 556 REKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 614
+K + F+ L+ ATR M A YFCSG +T + HY LA P+YTHFTSP+RRY
Sbjct: 725 VDKQEGS---FNTLVRIMATRCMLSAEYFCSGSVSKET-FSHYGLAAPIYTHFTSPIRRY 780
Query: 615 PDLVVHRTLNAALEAEKLY 633
D++ HR L+AA+ + L+
Sbjct: 781 ADILAHRQLSAAINYQPLH 799
>gi|281351838|gb|EFB27422.1| hypothetical protein PANDA_002303 [Ailuropoda melanoleuca]
Length = 935
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 272/536 (50%), Gaps = 65/536 (12%)
Query: 102 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSL 160
ER+ ++ +PTGRVV II+R+ W Y G S+ D K++R L
Sbjct: 330 ERILNTAANEKMLKPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL 375
Query: 161 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESP 219
TP + P++ R+E A+ +E + ID W S
Sbjct: 376 ---------FTPADRRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSR 413
Query: 220 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 279
+P H + G G+ E + +L E+ + FS LS LP +PW + ++++ +R+DL
Sbjct: 414 YPNGHFVKNLGDVGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDL 473
Query: 280 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 339
R+ C+ ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+V
Sbjct: 474 RHLCVCSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTV 533
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 399
Y+ +++I M+P LLS + SL VDRLAFS W++N +++ ++ I S L+Y
Sbjct: 534 YLCEKRIDMVPELLSSNLCSLRCNVDRLAFSCIWEMNHNAEILKVRFTKSAINSKASLTY 593
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
AQ ID S + + D+ S++ L +++KILK +R GAL
Sbjct: 594 AEAQMRID-------SAAMND------------DITTSLRGLNKLAKILKKRRIEKGALT 634
Query: 460 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR+H
Sbjct: 635 LSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKH 694
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 577
PAP L++ T ++ SL++A + + L+ ATR M
Sbjct: 695 PAPPPSNYEILVKAAKSKNLEIKTDTAKSLADSLDRADSPT---FPYLNTLLRILATRCM 751
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 752 MQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 804
>gi|431906892|gb|ELK11012.1| Exosome complex exonuclease RRP44 [Pteropus alecto]
Length = 947
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 187/538 (34%), Positives = 274/538 (50%), Gaps = 66/538 (12%)
Query: 102 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSL 160
ER+ + + +PTGRVV II+R+ W Y G S+ D K++R L
Sbjct: 313 ERILKTVVNEKMLKPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL 358
Query: 161 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESP 219
TP + P++ R+E A T+E + + ID W S
Sbjct: 359 ---------FTPADKRIPRI-------------RIETRQASTLEGQRIIVAIDGWPRNSR 396
Query: 220 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 279
+P H + G G+ E + +L E+ + FS LS LP +PW + ++++ +R+DL
Sbjct: 397 YPNGHFVKNLGEVGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDL 456
Query: 280 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 339
R+ C+ ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+V
Sbjct: 457 RHLCVCSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTV 516
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 399
Y+ +++I M+P LLS + SL VDRLAFS W++N +++ ++ I S L+Y
Sbjct: 517 YLCEKRIDMVPELLSSNLCSLRCNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLTY 576
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
AQ + D S N D+ S++ L +++KILK +R GAL
Sbjct: 577 AEAQ----MRIDSASMN---------------DDITVSLRGLNKLAKILKKRRIEKGALT 617
Query: 460 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR+H
Sbjct: 618 LSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKH 677
Query: 519 PAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 575
PAP N L + +++ T ++ SL++A L +L ATR
Sbjct: 678 PAPPPSNYEILVKAAKSKLAISVEIKTDTAKSLADSLDRA--DCPTFPYLNTLLRILATR 735
Query: 576 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
M A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 736 CMMQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 790
>gi|195504840|ref|XP_002099251.1| GE23472 [Drosophila yakuba]
gi|194185352|gb|EDW98963.1| GE23472 [Drosophila yakuba]
Length = 982
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 276/546 (50%), Gaps = 60/546 (10%)
Query: 90 SSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGS 149
S + D + ++++ A SS + PTGR+V I+ R +W Y G
Sbjct: 323 SEERAEDEKDMLKQVRAAASS-AERTPTGRIVGIVRR--------------KWRQYCGIL 367
Query: 150 RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAA 209
+ + D P K P++ + + A ++ + +
Sbjct: 368 QPSL--------IEDTTRHIFVPADRKIPRIRIETRQA------------AKLQNQRIIV 407
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP 269
ID W S +P H + G G++ + IL E+ + FS E LS LP +PW +
Sbjct: 408 TIDTWPRNSRYPHGHFVRSLGPLGDMATENEVILLEHDVPHCKFSDEVLSFLPQMPWTIT 467
Query: 270 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 329
+E+ R DLR+ I ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD
Sbjct: 468 EEDYAKRVDLRDLYICSVDPPGCTDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNALD 527
Query: 330 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 389
EA R T+VY++ ++I M+P LLS + SL GV+R AFS W++++ +V+ + ++
Sbjct: 528 KEAAARGTTVYLVGKRIDMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLSKRFHKS 587
Query: 390 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 449
VI+S ++YE AQ IID D N ++ +S+++L ++KILK
Sbjct: 588 VIKSKRAMTYEEAQVIID---DATQQN----------------EIAKSLRNLNRLAKILK 628
Query: 450 DKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
+R GAL L + + F D E P + + + N + EEFMLLAN T AE IA
Sbjct: 629 KRRMDSGALVLASPEIRFQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIATE 688
Query: 509 FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 568
F + A+LRRHP P G Q+D S + SL++ +K D F+
Sbjct: 689 FSECAVLRRHPRPPPTNFDPLVKAARYQGFQVDIDSGLELSHSLDKC---VKADNPYFNT 745
Query: 569 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
+I TR M A YF SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A++
Sbjct: 746 MIRILTTRCMMQAVYFISGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASI 804
Query: 628 EAEKLY 633
A+ Y
Sbjct: 805 GADSTY 810
>gi|18398450|ref|NP_565418.1| exosome complex exonuclease DIS3/RRP44 [Arabidopsis thaliana]
gi|15982745|gb|AAL09713.1| At2g17510/MJB20.7 [Arabidopsis thaliana]
gi|19699186|gb|AAL90959.1| At2g17510/MJB20.7 [Arabidopsis thaliana]
gi|20198264|gb|AAD32908.2| putative mitotic control protein dis3 [Arabidopsis thaliana]
gi|330251544|gb|AEC06638.1| exosome complex exonuclease DIS3/RRP44 [Arabidopsis thaliana]
Length = 933
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 199/645 (30%), Positives = 308/645 (47%), Gaps = 111/645 (17%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP----DREYIQL 170
RP+GRVV +I R+ W +Y G + +S+P +
Sbjct: 336 RPSGRVVGVIRRN--------------WHSYCG--------SLEPMSLPAGSGGTAHALF 373
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
+ PK+ + + L + ++M +V A +D W+ +S +P H + G
Sbjct: 374 VSKDRRIPKIRINTRQLQN-----------LLDMRIVVA-VDSWDRQSRYPSGHYVRPIG 421
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTID 288
+ G+ E + +L EN + S FS + L+CLP +PW V E++ + R+DLR+ +F++D
Sbjct: 422 KIGDKETETEVVLIENDVDYSPFSSQVLACLPPLPWSVSSEDVSNPVRQDLRHLLVFSVD 481
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P D+DDAL L +G +GVHIADV+ FV PGT LD EA R TSVY+++R+I M
Sbjct: 482 PPGCKDIDDALHCTSLPNGNFELGVHIADVTNFVHPGTPLDDEASKRGTSVYLVERRIDM 541
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP L+E++ SL V+RLAFS+ W+++ +++ +++I+S LSY AQ +D
Sbjct: 542 LPKPLTEDICSLRADVERLAFSVIWEMSPDAEIISTRFTKSIIKSSAALSYIEAQARMDD 601
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 468
+S T ++++ ++KI++ +R GAL L +++ F
Sbjct: 602 SRLTDSLTT-------------------DLRNMNTLAKIMRQRRIDRGALTLASAEVKFD 642
Query: 469 FD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
D E P + + + N + EEFML AN + A I + FP +LLRRHP P L
Sbjct: 643 IDPENHDPLNIGMYQILEANQMVEEFMLAANVSVAGQILKLFPSCSLLRRHPTPTREMLE 702
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 587
+ GL LD SSS SL++A + +D ++ ATR M A YFCSGD
Sbjct: 703 PLLRTAAAIGLTLDVSSSKALADSLDRA---VGEDPYFNKLIRILATRCMTQAVYFCSGD 759
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHRE 647
++ HY LA P+YTHFTSP+RRY D+ VHR L A+L K
Sbjct: 760 LS-PPEYHHYGLAAPLYTHFTSPIRRYADVFVHRLLAASLGIYK---------------- 802
Query: 648 GVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKD 707
L +F D+ L +VA + N R +
Sbjct: 803 ------LPTVFQDRPQ------------------------LTSVADNLNYRHRNAQMAGR 832
Query: 708 ACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
A V+LY+ I + + EARV+ + +++ K IE +Y
Sbjct: 833 ASVELYVLIYFRTRPT-DEEARVVKIRSNGFIVFVPKYGIEGPVY 876
>gi|301757139|ref|XP_002914417.1| PREDICTED: exosome complex exonuclease RRP44-like isoform 1
[Ailuropoda melanoleuca]
Length = 958
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 272/536 (50%), Gaps = 65/536 (12%)
Query: 102 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSL 160
ER+ ++ +PTGRVV II+R+ W Y G S+ D K++R L
Sbjct: 327 ERILNTAANEKMLKPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL 372
Query: 161 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESP 219
TP + P++ R+E A+ +E + ID W S
Sbjct: 373 ---------FTPADRRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSR 410
Query: 220 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 279
+P H + G G+ E + +L E+ + FS LS LP +PW + ++++ +R+DL
Sbjct: 411 YPNGHFVKNLGDVGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDL 470
Query: 280 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 339
R+ C+ ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+V
Sbjct: 471 RHLCVCSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTV 530
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 399
Y+ +++I M+P LLS + SL VDRLAFS W++N +++ ++ I S L+Y
Sbjct: 531 YLCEKRIDMVPELLSSNLCSLRCNVDRLAFSCIWEMNHNAEILKVRFTKSAINSKASLTY 590
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
AQ ID S + + D+ S++ L +++KILK +R GAL
Sbjct: 591 AEAQMRID-------SAAMND------------DITTSLRGLNKLAKILKKRRIEKGALT 631
Query: 460 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR+H
Sbjct: 632 LSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKH 691
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 577
PAP L++ T ++ SL++A + + L+ ATR M
Sbjct: 692 PAPPPSNYEILVKAAKSKNLEIKTDTAKSLADSLDRADSPT---FPYLNTLLRILATRCM 748
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 749 MQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 801
>gi|198453286|ref|XP_001359139.2| GA19573 [Drosophila pseudoobscura pseudoobscura]
gi|198132293|gb|EAL28283.2| GA19573 [Drosophila pseudoobscura pseudoobscura]
Length = 978
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 178/522 (34%), Positives = 267/522 (51%), Gaps = 59/522 (11%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
+ PTGR+V I+ R +W Y G + +N + +I P
Sbjct: 348 RTPTGRIVGIVRR--------------KWRQYCGILQPSLIENTN-------RHI-FVPA 385
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
K P++ + + A ++ + + ID W S +PQ H + G G
Sbjct: 386 DRKIPRIRIETRQA------------AKLQNQRIIVTIDTWPRNSRYPQGHFVRSLGPLG 433
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
++ + IL E+ + FS + LS LP +PW + E+ R DLR I ++DP T
Sbjct: 434 DMATENEVILLEHDVPHCKFSEKVLSFLPKLPWSITAEDYAKRVDLRELDICSVDPPGCT 493
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+VY++ ++I M+P LL
Sbjct: 494 DIDDALHCRELPNGNFEVGVHIADVSHFIRPGNALDKEAAARGTTVYLVGKRIDMVPELL 553
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL GV+R AFS W+++ +V+D+ ++VI+S ++YE AQ +ID
Sbjct: 554 SSNLCSLVGGVERFAFSCVWEVDKEANVIDKRFHKSVIKSKRAMTYEEAQVLIDDA---- 609
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
+ S++ +S++ L ++KILK +R +GAL L + + F D E
Sbjct: 610 ---------------TQQSEIAKSLRHLNRLAKILKKRRMDNGALVLASPEIRFQVDSET 654
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P + + N + EEFMLLAN T AE IA F + A+LRRHP P
Sbjct: 655 HEPLEVEAKQMRETNSMVEEFMLLANITVAEHIAAEFTECAVLRRHPKPPPTNFDPLVKA 714
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 591
G Q+DT + SL++ +K+D F+ +I TR M A YF SG + +
Sbjct: 715 ARYQGFQVDTETGLVLSHSLDKC---VKEDNPYFNTMIRILTTRCMMQAVYFISGSLQKE 771
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
++ HY LA P+YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 772 -EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 812
>gi|194747391|ref|XP_001956135.1| GF24745 [Drosophila ananassae]
gi|190623417|gb|EDV38941.1| GF24745 [Drosophila ananassae]
Length = 1159
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/414 (38%), Positives = 235/414 (56%), Gaps = 17/414 (4%)
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSP-----ESLSCLPCVPWEVPQEELLSRK 277
A ++ GR G +E ++ AIL+ N + P + P P V E+L +R+
Sbjct: 569 AELIQPVGRVGNLEDELKAILFHNGL--RDIKPFEQRFNDMYSEPAPP--VGAEDLRNRR 624
Query: 278 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 337
DLR CIFTIDP TA DLDDA+S+E+L D + VGVHI+DVS+F+ LD + RST
Sbjct: 625 DLRKKCIFTIDPLTARDLDDAVSVEQLGDNVFEVGVHISDVSHFLSEACELDEIVKERST 684
Query: 338 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW--IGRTVIRSCC 395
S+Y++ I MLP + SL PG D+ AFS+FW +N G ++ RTVI SC
Sbjct: 685 SIYLVNEVIHMLPQTMCMRC-SLLPGEDKFAFSVFWKMNDQGVMLQEKPEFARTVINSCT 743
Query: 396 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 455
+ +YEHAQ IID + + + +P + F+ D+ + L+ +++ ++ RF +
Sbjct: 744 QFAYEHAQKIIDNPRERFTE----DDFPTIVNGFQPDDIAERVLLLHGMARSMRKARFDN 799
Query: 456 GALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSAL 514
G+L + N+K F+ D G P + + + N + EEFMLLAN+ A I +FPD A+
Sbjct: 800 GSLTINNAKLRFVLDPISGEPQCFEVEQQREANRMIEEFMLLANQAVARFIHDSFPDIAV 859
Query: 515 LRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYAT 574
LR HP P + L+ + GL+LD SSS +S+ + + D + L
Sbjct: 860 LRNHPPPLTKSLKSLKEKLLAQGLELDYSSSKALQESMVRLCREASDPVAMSACLSQLLM 919
Query: 575 RPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
+PM A+YFCS + +D HYAL+ P+YTHFTSP+RRYPD++VHR L AAL+
Sbjct: 920 KPMARATYFCSEGKSEPSDLWHYALSIPIYTHFTSPIRRYPDIMVHRLLAAALK 973
>gi|340368344|ref|XP_003382712.1| PREDICTED: exosome complex exonuclease RRP44-like [Amphimedon
queenslandica]
Length = 948
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 205/593 (34%), Positives = 287/593 (48%), Gaps = 86/593 (14%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG--SRKDAKKNRSSLSVPDREYIQLTP 172
+PTG+VV II+R+ W Y G +D K R + P
Sbjct: 339 QPTGKVVGIIKRN--------------WRPYCGTLLPLQDMKGFRHTF----------VP 374
Query: 173 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ + + P+ + KR + ID W+ + FP H + G
Sbjct: 375 AERRIPRIRIETRQGPNLLGKR------------IMVSIDAWSRLARFPSGHFVKELGPI 422
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G+ E + +L E+ + FSP L LP PW + EE+ R DLR+ I ++DP
Sbjct: 423 GDRETENEVLLLEHDVPHLPFSPAVLKDLPQTPWVITDEEISKRLDLRHLSICSVDPPGC 482
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ P TALD EA R T+VY+ +++I M+P L
Sbjct: 483 TDIDDALHYRELDNGNVEVGVHIADVSHFIRPKTALDEEASNRGTTVYLAEKRIDMVPEL 542
Query: 353 LSEEVGSLNPGVDRLAFSIFWDL--NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 410
LS + SL G +RLAFS+ W++ + A V R++ +TVI S L+Y AQ ID K
Sbjct: 543 LSSNLCSLRSGEERLAFSVLWEMSPDDAHIVSTRFV-KTVIESKESLTYAEAQMKIDDK- 600
Query: 411 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 470
+L + DV S++ L ++KILK +R GAL L + + F D
Sbjct: 601 ------SLRD------------DVTTSLRGLNSLAKILKGRRLEAGALTLASPEIRFEID 642
Query: 471 -EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
E P D + ++ N L EEFMLLAN + AE I AFPD ALLRRHP P
Sbjct: 643 SETHDPIDLINKELKETNSLVEEFMLLANVSVAEAIYEAFPDCALLRRHPPPPTSNYDIL 702
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G L S+ SLE AR + D+ +L ATR M A YFCSG
Sbjct: 703 LKAAKGKGFDLIVDSAKSLADSLEMAR--IPDNEYFNTLLRIMATRCMMQAVYFCSGSIT 760
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY---------------W 634
++ HY LA P+YTHFTSP+RRY D++VHR L +++++ Y
Sbjct: 761 -YKEYHHYGLAAPIYTHFTSPIRRYSDIIVHRLLAVSIDSDVTYPLLLDKHHTQQLSNHL 819
Query: 635 KHRRMLPKNNHREGVRGRFLTGIFY-DKDAAES----LEGREALSVAALKYGV 682
HR + + R V T +F+ +KD E L R A+ V YG+
Sbjct: 820 NHRHKMAQYAQRSSV--SLHTHLFFKEKDKVEDGFVLLVRRNAIQVIIPAYGI 870
>gi|301757141|ref|XP_002914418.1| PREDICTED: exosome complex exonuclease RRP44-like isoform 2
[Ailuropoda melanoleuca]
Length = 928
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 272/536 (50%), Gaps = 65/536 (12%)
Query: 102 ERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSL 160
ER+ ++ +PTGRVV II+R+ W Y G S+ D K++R L
Sbjct: 297 ERILNTAANEKMLKPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL 342
Query: 161 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESP 219
TP + P++ R+E A+ +E + ID W S
Sbjct: 343 ---------FTPADRRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSR 380
Query: 220 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 279
+P H + G G+ E + +L E+ + FS LS LP +PW + ++++ +R+DL
Sbjct: 381 YPNGHFVKNLGDVGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDL 440
Query: 280 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 339
R+ C+ ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+V
Sbjct: 441 RHLCVCSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTV 500
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 399
Y+ +++I M+P LLS + SL VDRLAFS W++N +++ ++ I S L+Y
Sbjct: 501 YLCEKRIDMVPELLSSNLCSLRCNVDRLAFSCIWEMNHNAEILKVRFTKSAINSKASLTY 560
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
AQ ID S + + D+ S++ L +++KILK +R GAL
Sbjct: 561 AEAQMRID-------SAAMND------------DITTSLRGLNKLAKILKKRRIEKGALT 601
Query: 460 LENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
L + + F D E P D + N + EEFMLLAN + A+ I F + ALLR+H
Sbjct: 602 LSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKH 661
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 577
PAP L++ T ++ SL++A + + L+ ATR M
Sbjct: 662 PAPPPSNYEILVKAAKSKNLEIKTDTAKSLADSLDRADSPT---FPYLNTLLRILATRCM 718
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 719 MQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 771
>gi|14250916|emb|CAC39263.1| putative ribonuclease II-like protein [Trypanosoma brucei]
Length = 895
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 222/699 (31%), Positives = 346/699 (49%), Gaps = 62/699 (8%)
Query: 80 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPT------KRPTGRVVSIIERSPRRDGI 133
P T + + N+ N L+ M+S+ PT K+P+G V++++ER
Sbjct: 117 PDGRRITRWIRDTTMNNRKNREMWLAEMMSA-PTEHNWHGKKPSGSVIAVLERKH----- 170
Query: 134 VGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKK 193
L V + + S++ + DR + + P + V +D+P S+++
Sbjct: 171 -PLLFVARLADDALSSQE---------VIQDRRFYRFKVFDQLLPHIAVFGRDIPFSLRE 220
Query: 194 RLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGF 253
+ E + +E W ES FP A ++ FG + AI + I F
Sbjct: 221 SIRERFYLLRLETTTGGDIVW-AESRFPTARIISTFGSVHSLRANTFAICSAHHIVTDDF 279
Query: 254 SPESLSCLPCVPWEVPQEEL--LSRKDLR-NFCIFTIDPSTATDLDDALSIERLSDGISR 310
S E+ +C+P EE+ R+DLR + +IDP+TA DLDDALSI L G R
Sbjct: 280 SEEACNCIPDRLIIPNSEEMKRTGRRDLRREEFVCSIDPATARDLDDALSITLLPGGY-R 338
Query: 311 VGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFS 370
VGVHIADVS+FV PG+ALD E + R+TSVY++ R MLP LSEE SL+PG D+LAFS
Sbjct: 339 VGVHIADVSHFVSPGSALDEEGRARATSVYLVDRVYHMLPRKLSEEYCSLHPGSDKLAFS 398
Query: 371 IFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFE 430
+ L+ G + W G++VIR+ C+LSY+ AQ IIDG + G +
Sbjct: 399 AIFQLDLNGKLKGEWFGKSVIRNRCRLSYDDAQRIIDGNLTTLDALDYGGVTDRRELSQL 458
Query: 431 WSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSV---LSGREDLN 487
+ V S+K L++++ L+ F G L + F F++ P + + + + N
Sbjct: 459 KARVATSVKHLFDLASKLRAASFERGRLAFSTPEIGFHFEDISNPTHPIGFNVHRQIEAN 518
Query: 488 FLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQ 547
+L EEFMLLAN A+ I + PD A+LR HP P + + ++ ++L G+
Sbjct: 519 WLVEEFMLLANLRVAQKIVQYLPDQAILRVHPPPKRVPFEQLKVSLARVNIEL----KGR 574
Query: 548 FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD-FKDDTDWGHYALAFPVYTH 606
++SLEQ ++ D+ L D + + LA Y +G+ F + GHYAL YTH
Sbjct: 575 SNKSLEQLLNSVR-DHPLRDEISIMVKNTLSLAKYCTNGENFTNKVPLGHYALGLEWYTH 633
Query: 607 FTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAES 666
FTSP+RRY D++VHR L ALE E + V+G+ TG K A +
Sbjct: 634 FTSPIRRYADIIVHRQLLCALEIESI----------------VKGKHRTG----KTCAGA 673
Query: 667 LEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKK-KEVLL 725
+ G E + + ++ +++ N+A CN+ K A +V +A +KL+ LK + + +
Sbjct: 674 V-GMEVECLDSAEFFTSTYEVM-NIADECNENKRAADSVSEASLKLFFCHYLKSLRSLWV 731
Query: 726 SEARVLALGPRFMTIYIEKLAIERRI--YYDEVEGLIVE 762
S + PR + I +A E+++ Y V G+ VE
Sbjct: 732 SSNKEDPFIPRVDAVVI-SVAPEKKVLMLYARVVGISVE 769
>gi|308811761|ref|XP_003083188.1| Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS)
[Ostreococcus tauri]
gi|116055067|emb|CAL57463.1| Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS)
[Ostreococcus tauri]
Length = 1157
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 187/526 (35%), Positives = 268/526 (50%), Gaps = 62/526 (11%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWE 267
R+D W E +P H++ V G G+V+ ++ A+L + I F +L+ LP W
Sbjct: 118 RVDRWRENQRYPNGHLIRVLGDVGDVDGEMAALLARHEIPAEPFGARALAELPREGTNWV 177
Query: 268 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSI------ERLSDGIS-RVGVHIADVSY 320
VP+EEL +R+DLR+ +IDP TD+DDALS+ ER ++G + +GVHIADVSY
Sbjct: 178 VPREELETRRDLRHHRACSIDPPGCTDVDDALSVRAVPQSERGANGGAFEIGVHIADVSY 237
Query: 321 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGD 380
FV PGT LD EAQ R T+VY++ R++ MLP LLSE + SL DRLA S W L+ D
Sbjct: 238 FVQPGTTLDHEAQTRGTTVYLVDRRLDMLPSLLSENLASLLEKRDRLAMSCVWTLDENLD 297
Query: 381 VVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKS 440
VVD W GRTVI S +++Y AQ I DGK +T+ E G+ + + V +K+
Sbjct: 298 VVDVWFGRTVIHSRHQMTYYQAQAIYDGKPPPVDGSTVFE------GEDDIAVVREDLKT 351
Query: 441 LYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANK 499
L + R GA+ LE+++ F D + +P + + + + E M+LAN
Sbjct: 352 LVAFANKTNAIRVAHGAVELESAELRFETDAQTKSPTEVIQKSEVPMMRVVAELMILANS 411
Query: 500 TAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 559
AA FP ALLRRH P E + G++LD SS + SL AR
Sbjct: 412 AAARATHSVFPSCALLRRHAPPRQDGFAELSRLAATKGVKLDCSSGEALNASL--ARIAN 469
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFK-DDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
+ D + + ATR M A Y SG ++ +GHY LA YTHFTSP+RRY D+V
Sbjct: 470 ECDPEVTTLFKGLATRAMSEAQYVSSGSISATESSFGHYGLALTYYTHFTSPIRRYADIV 529
Query: 619 VHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAAL 678
VHR L AA+EA ++ +K A E A
Sbjct: 530 VHRQLIAAVEATEM---------------------------EKKATED----------AT 552
Query: 679 KYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVL 724
+ G L ++A H N+R A + + C ++Y+ LL++ ++
Sbjct: 553 RRG------LDSLAEHLNERNRASKRAQSRCGEIYLLWLLRENPMI 592
>gi|356509070|ref|XP_003523275.1| PREDICTED: exosome complex exonuclease RRP44-like [Glycine max]
Length = 934
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 210/688 (30%), Positives = 328/688 (47%), Gaps = 114/688 (16%)
Query: 80 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNV 139
P+++D + S Q + S +++ P+ RP+GR+V II+R+
Sbjct: 312 PNSADDAPRTISQQGS---------SEQVNAVPS-RPSGRIVGIIKRN------------ 349
Query: 140 NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGD 199
W +Y GS + S + ++ + PK+ + + L + + KR+
Sbjct: 350 --WHSY-CGSLEPMPMPAGSGGIAHALFVS---KDRRIPKIRIQTRQLENLLDKRI---- 399
Query: 200 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 259
+VA +D W+ +S +P H + G G+ + + +L EN I FS + L+
Sbjct: 400 ------IVA--VDSWDRQSRYPSGHYVRTIGEIGDRDTESEVVLIENDINTRPFSSQVLA 451
Query: 260 CLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 317
CLP +PW V E+L + RKDLR+ +F++DP D+DDAL L +G VGVHIAD
Sbjct: 452 CLPPLPWVVSSEDLSNPIRKDLRHLRVFSVDPPGCKDIDDALHCHVLPNGNFEVGVHIAD 511
Query: 318 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 377
V+ FV PGT LD EA R TSVY+++R+I MLP L+E++ SL V+RLAFS+ W++
Sbjct: 512 VTNFVYPGTPLDDEAAQRGTSVYLVERRIDMLPKPLTEDICSLRSDVERLAFSVIWEMTP 571
Query: 378 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 437
D++ ++VI+S LSY AQ +D ++ +
Sbjct: 572 EADIIATSYTKSVIKSSAALSYVEAQARMDDSRLMDP-------------------ITAD 612
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLL 496
++++ ++K ++ +R GAL L +++ F D E P D + + N + EEFML
Sbjct: 613 LRNMNSLAKKMRLRRIERGALTLASAEVKFQIDTETHDPLDIGMYQIREANQMVEEFMLA 672
Query: 497 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR 556
AN + A+ I ++FP +LLRRHP P L + GL LD SSS SL+ A
Sbjct: 673 ANVSVAQQILKSFPLCSLLRRHPTPTREMLEPLLRTAAAVGLHLDVSSSKALADSLDHA- 731
Query: 557 EKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP- 615
+ DD ++ ATR M A YFCSGD ++ HY LA +YTHFTSP+RRY
Sbjct: 732 --VGDDPYFNKLIRILATRCMTQAVYFCSGDLS-PPEYHHYGLAALLYTHFTSPIRRYAV 788
Query: 616 DLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSV 675
D++VHR L A+L K L +F D SL+
Sbjct: 789 DVIVHRLLAASLGISK----------------------LPPVFQD-----SLQ------- 814
Query: 676 AALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGP 735
L ++A + N R + A V+L+ I +K+ +E R++ +
Sbjct: 815 ------------LTSIADNLNYRHRNAQYAGRASVELHTLIYFRKRPT-DTEGRIVKIRS 861
Query: 736 RFMTIYIEKLAIERRIYYDEVEGLIVEW 763
+++ K IE +Y + E EW
Sbjct: 862 NGFFVFVPKYGIEGPVYLTKAEKGSGEW 889
>gi|307186828|gb|EFN72248.1| Exosome complex exonuclease RRP44 [Camponotus floridanus]
Length = 945
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 199/605 (32%), Positives = 303/605 (50%), Gaps = 83/605 (13%)
Query: 102 ERLSAMISSYPTKR--PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 159
E++ A S TK PTG++V II R R+ + + Q KG R
Sbjct: 284 EKVLAKTSLLKTKEKIPTGKIVGIIRRKWRQ-----YCGILQPSPIKGNVRH-------- 330
Query: 160 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI-EMELVAARIDEWNEES 218
P K PK+ R+E A I + + +D W S
Sbjct: 331 ---------LFVPAERKIPKI-------------RIETRQAEILSKQRIIVALDSWPRNS 368
Query: 219 PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKD 278
+P H + G G+ E + +L E+ + S FS LS LP +PW + + ++ R+D
Sbjct: 369 RYPLGHFVRALGNIGDKETENEVLLLEHDVPPSHFSDAVLSFLPKLPWVITEMDIAQRED 428
Query: 279 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 338
LR+ I ++DP TD+DDAL L +G VGVHIADVS+F+ PGTALD EA R+T+
Sbjct: 429 LRHLDICSVDPPGCTDIDDALHCRNLPNGNFDVGVHIADVSHFIRPGTALDKEAASRATT 488
Query: 339 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 398
VY++ ++I M+P LLS + SL G +R AFS W+++S ++V+ +++IRS ++
Sbjct: 489 VYLVDKRIDMVPELLSSNLCSLRGGEERFAFSCIWEIDSDANIVNTRFCKSIIRSRRAMT 548
Query: 399 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 458
YE AQ ID ++ + +S++ L +++K LK +R +GAL
Sbjct: 549 YEEAQLKIDDATQQDA-------------------IAQSLRGLNQIAKQLKKRRLQNGAL 589
Query: 459 RLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 517
L + + F D E P D + N + EEFMLLAN + AE I + FP+ A+LRR
Sbjct: 590 TLASPEIRFQVDSETHDPIDVEAKKLRETNSMVEEFMLLANISVAERILKEFPECAMLRR 649
Query: 518 HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 576
HP P G ++T++ + QSLE+++ K+ F+ ++ ATR
Sbjct: 650 HPEPPQSNFEPLIKAAKNQGFIINTNTGKELAQSLEESK---KESNPYFNTMLKILATRC 706
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY--- 633
M A YF SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L + A+ Y
Sbjct: 707 MLQAVYFISGMHQPE-EFKHYGLACPIYTHFTSPIRRYADIIVHRLLAVCIGADATYPQL 765
Query: 634 --WKHRRMLPKN-NHREGV---RGR----FLTGIFYDKDAAESLEG------REALSVAA 677
K+ +L +N N+R + GR T +F+ +D + EG + AL V
Sbjct: 766 LDKKNNHLLCQNLNYRNRMAQYAGRASVALHTHLFF-RDKVQDEEGYILFVRKNALQVLI 824
Query: 678 LKYGV 682
KYG+
Sbjct: 825 PKYGL 829
>gi|307106933|gb|EFN55177.1| hypothetical protein CHLNCDRAFT_35599 [Chlorella variabilis]
Length = 1021
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 221/676 (32%), Positives = 322/676 (47%), Gaps = 123/676 (18%)
Query: 101 IERLSAMISSY--PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRS 158
I + SAM+++ P +VV II R+ R G G L K G A S
Sbjct: 338 IAQASAMVAARWRPVAAACCKVVGIIRRNWRTRGYCGSLQPP-----KSGPSGSANHTHS 392
Query: 159 SLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEES 218
L P ++P + + + KRL +VA ID W +S
Sbjct: 393 LL---------FCPVERRFPYIRIQTRQAATLADKRL----------VVA--IDCWEADS 431
Query: 219 PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELL--SR 276
+P H + G G+ E + +L EN I S F+ +C+P +PW V + +L SR
Sbjct: 432 LYPSGHYVRTLGAIGDKETETEVLLIENDINTSPFTAAVHACVPPLPWAVSEADLSDPSR 491
Query: 277 KDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRS 336
DLR+ + ++DP D+DDAL + RL G +GVHIADV+ FV P TA+D EA R+
Sbjct: 492 ADLRHLAVCSVDPPGCKDIDDALHVRRLPSGSYELGVHIADVTNFVHPATAMDEEASARA 551
Query: 337 TSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCK 396
T+VY++QR+I MLP L+E++ SL V+RLAFS+ W++ +VV ++VIRS
Sbjct: 552 TTVYLVQRRIDMLPKPLTEDICSLRADVERLAFSVIWEVTPEAEVVSSQFTKSVIRSRAA 611
Query: 397 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 456
L+Y AQ ID D ++ L ++++L +++KIL+ KR G
Sbjct: 612 LTYAEAQSRID---DARLTDELSI----------------NLRTLNQLAKILRQKRADRG 652
Query: 457 ALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 515
AL+L + + F D E P D + + N + EE MLLAN T AE R FP ALL
Sbjct: 653 ALQLASPEVKFEIDTETHDPLDVGMYQVREANQMVEEMMLLANCTVAEFTLRHFPSCALL 712
Query: 516 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFH------------------QSLEQARE 557
RRHP P R+ + G+ +D S+S QSL++A
Sbjct: 713 RRHPVPPPRQFEPLLRAAAAAGISIDPSTSKARRLGGAATPARCPPPASDPAQSLDRA-- 770
Query: 558 KLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 616
++ D F+ LI ATR M A Y SG+ ++ HY LA P+YTHFTSP+RRY D
Sbjct: 771 -VRADDPYFNKLIRIMATRCMTTAVYLSSGELS-APEYHHYGLAAPLYTHFTSPIRRYAD 828
Query: 617 LVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVA 676
++VHR L AAL R LP ESL RE
Sbjct: 829 VIVHRVLMAALGL--------RPLP-----------------------ESLRDRE----- 852
Query: 677 ALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPR 736
L +GV + N+ + ++A R A V+L+ I + ++V +++ARV A G
Sbjct: 853 -LMHGV-----VDNLNVRHRNAQMAGR----ASVELHTLIFFRSRQV-VADARVRANG-- 899
Query: 737 FMTIYIEKLAIERRIY 752
+ +++ K IE +Y
Sbjct: 900 -LIVFVPKYGIEGPVY 914
>gi|452987594|gb|EME87349.1| hypothetical protein MYCFIDRAFT_148028 [Pseudocercospora fijiensis
CIRAD86]
Length = 992
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 207/588 (35%), Positives = 290/588 (49%), Gaps = 72/588 (12%)
Query: 60 EAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGR 119
+A + ++IE E N N + + +S E + + Q+ + R + S +PT +
Sbjct: 327 KAPSSKVIEEEDINK-NDNAENEDESAEPIVTEQERKALLEEARRAQGKVSEGRPQPTAK 385
Query: 120 VVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPK 179
VV II+R+ W Y G KD+ K+ + S ++ + L P + PK
Sbjct: 386 VVGIIKRN--------------WRQYVGHIDKDSVKSGAKQSRA-QQTVFLIPMDKRIPK 430
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG----RGGEV 235
+ V + D + KR V ID W+ ES +P H + G +G E
Sbjct: 431 IRVRTRQAGDLLGKR------------VLVTIDSWDRESRYPVGHFIRSLGELETKGAET 478
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLS------RKDLRNFCIFTI 287
E A+L E + F L CLP W+VPQ+ LS RKDLR+ I +I
Sbjct: 479 E----ALLLEWDVQYRPFPKSVLDCLPAEGHDWKVPQD--LSHPGWKGRKDLRDLLICSI 532
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++ ++I
Sbjct: 533 DPPGCVDIDDALHARVLPNGNFEVGVHIADVSHFVKPNNAMDKEASLRGTTVYLVDKRID 592
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 407
MLP+LL ++ SL P V+R AFS+ W+LN+ D+++ ++VIRS SYE AQ ID
Sbjct: 593 MLPMLLGTDLCSLKPYVERYAFSVIWELNANADIINASFTKSVIRSREAFSYERAQLRID 652
Query: 408 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PV 466
+ + D+ + ++ L +SK L+ KR GAL L + + V
Sbjct: 653 DR-------------------SQQDDLTKGMRHLMMLSKKLRAKRMAAGALNLASPEVRV 693
Query: 467 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
E P D D N L EEFMLLAN + A AFP +ALLRRH AP
Sbjct: 694 ETESETSDPVDVKTKQLLDTNQLVEEFMLLANISVAGKNYEAFPQTALLRRHAAPPKNNF 753
Query: 527 REF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFC 584
E K G++L T SS +L+ + D F+ L+ ATR M A YFC
Sbjct: 754 EELSNQLKVKKGMELRTDSSKALADTLDTC---VDSDNPFFNTLVRILATRCMMSAEYFC 810
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
SG + ++ HY LA +YTHFTSP+RRY DL HR L AA+E E L
Sbjct: 811 SGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLEAHRQLAAAIEYEPL 857
>gi|194206544|ref|XP_001918133.1| PREDICTED: DIS3 mitotic control homolog (S. cerevisiae)-like [Equus
caballus]
Length = 1035
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 200/657 (30%), Positives = 324/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 311 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 353
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 354 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 401
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V E+ R+DLR +F+IDP
Sbjct: 402 EAEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVNPEDERERRDLRKTHLVFSIDPK 461
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L +G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 462 GCEDVDDTLSVRTLHNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 521
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 522 SVLSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 581
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
+ + + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 582 VSIVDDIPEFRNLDEKSREARLKELVWAIGKLTDIARHVRAKRDRCGALELEGVEVRVQL 641
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 642 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 701
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL++A + +D ++ +L + AT+ M A YF +G
Sbjct: 702 RECAKAKGFVIDTRSNKTLADSLDKAND--PNDPIVNRLLRSMATQAMSNALYFSTGSCA 759
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K +M K N
Sbjct: 760 EE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDK------KMEIKEN----- 807
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 808 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 835
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 836 TELFQCMYFKDKDPETEERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDGLVI 892
>gi|355684007|gb|AER97261.1| DIS3 mitotic control-like protein [Mustela putorius furo]
Length = 881
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 267/523 (51%), Gaps = 65/523 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 264 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 300
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 301 DRRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 347
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP
Sbjct: 348 GDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGC 407
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 408 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 467
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 468 LSSNLCSLRCNVDRLAFSCIWEMNHNAEILKVRFTKSAINSKASLTYAEAQMRID----- 522
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
S + + ++ S++ L +++KILK +R GAL L + + F D E
Sbjct: 523 --SAAMND------------EITTSLRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSE 568
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 569 THDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAPPPSNYEILVK 628
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
L++ T ++ SL++A + + L+ ATR M A YFCSG
Sbjct: 629 AAKSKNLEIKTDTAKSLADSLDRADSPT---FPYLNTLLRILATRCMMQAVYFCSG---M 682
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 683 DNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADCTY 725
>gi|344293423|ref|XP_003418422.1| PREDICTED: DIS3-like exonuclease 1-like [Loxodonta africana]
Length = 1054
Score = 281 bits (720), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 202/657 (30%), Positives = 327/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V G+ ++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGKIRDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V EE RKDLR +F+IDP
Sbjct: 421 EGEIATILVENSISVVPFSEAQMCKMPVNTPENPWKVSPEEERERKDLRKTHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +D EA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDTEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L++ +V W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVMWELDATSYEVKKVWYGRTIIRSTYKLFYEAAQELLDGN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F V + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FSVIEDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDRCGALELEGVEVRVQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DEQKNIHDLIPKEPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ +SL++A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFSIDTRSNKTLAESLDKAND--PSDPIVNRLLRSMATQAMSNALYFSTGSCA 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M K N
Sbjct: 779 EE-EFRHYGLALDKYTHFTSPIRRYSDIVVHRLLLAAISKDK------KMEIKEN----- 826
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +K+ E + H N+R A ++ +
Sbjct: 827 -------LFSNKELEE-------------------------LCRHINNRNRAAQHSQKQS 854
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K + E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 855 TELFQCMYFKDRDPETEERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDGLVI 911
>gi|296213519|ref|XP_002753303.1| PREDICTED: DIS3-like exonuclease 1 [Callithrix jacchus]
Length = 1054
Score = 281 bits (720), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 205/657 (31%), Positives = 323/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR ++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIRDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I FS + +P PW+V EE RKDLR + +F+IDP
Sbjct: 421 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPEEERERKDLRRSHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L +G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLHNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A SI W+L+ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSIMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
+ + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 LSIIDDIPEFRDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE +D + +++ E M+LAN A+ I +FP LLR+HP P+ E
Sbjct: 661 DEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQVLLRQHPPPHQEFFSEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + +D V+ +L + AT+ M A YF +G K
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNAND--PNDPVVNRLLRSMATQAMSNALYFSTGACK 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ E +M K N
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKEN------KMEIKGN----- 826
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 827 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKQS 854
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 855 TELFQCMYFKDKDPDTEERCVSDGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDGLVI 911
>gi|56605836|ref|NP_001008381.1| DIS3-like exonuclease 1 [Rattus norvegicus]
gi|55250593|gb|AAH85932.1| DIS3 mitotic control homolog (S. cerevisiae)-like [Rattus
norvegicus]
gi|149041954|gb|EDL95795.1| similar to expressed sequence AV340375, isoform CRA_b [Rattus
norvegicus]
Length = 971
Score = 281 bits (720), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 185/526 (35%), Positives = 285/526 (54%), Gaps = 46/526 (8%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 290 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWETTSVYPNGHFVRVLGRIGDL 337
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +E R+DLR+ +F+IDP
Sbjct: 338 EGEIATILVENSINVVPFSEAQMCEMPVNTAENPWKVSPKEEQERRDLRSTHLVFSIDPK 397
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDALS+ L++G +GVHIADV++FV P + +D+EA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDALSVRTLNNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP 457
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 410 F----DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
F D+ TL E Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 518 FSIVDDIPEFKTLEEQ----NRQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEV 573
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+
Sbjct: 574 RVQLDDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEF 633
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
E G +DT S+ SL+ A + D ++ +L + AT+ M A YF +
Sbjct: 634 FSELRECAKAKGFFIDTRSNKTLADSLDSAND--PSDPLVNKLLRSMATQAMSNALYFST 691
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
G ++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 692 GSCAEE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 736
>gi|384486399|gb|EIE78579.1| hypothetical protein RO3G_03283 [Rhizopus delemar RA 99-880]
Length = 1260
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 204/666 (30%), Positives = 315/666 (47%), Gaps = 113/666 (16%)
Query: 118 GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE-----YIQL 170
G VV+I+ER+ + G + + N K ++AKK +++ +
Sbjct: 496 GIVVAILERAQNQVFSGTLTLMRPNN----KRAQEEEAKKLLDGYDASNQQKEAPRIVWF 551
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
+ + P + + ++ PD + +E L W S P + G
Sbjct: 552 KASDKRVPLIAIPIEQAPDDFVENSQE----YSKRLFVGTTKRWPITSLHPFGSLEEEIG 607
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLR-NFCIFTIDP 289
E+E Q AIL +N + S FS SCLP + ++ + SR+DLR N FTIDP
Sbjct: 608 SVYELETQTKAILADNNVTNSEFSEAVQSCLPPLSFDCGSDIDSSRRDLRDNTVTFTIDP 667
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
+ LDDALSI+++ G +GVH++DV+YF+ T LD EA+ R V ++ +PM+
Sbjct: 668 KGSNVLDDALSIKKVDKGTWEIGVHVSDVTYFIKSQTPLDKEARARGVRVDLVHSHVPMI 727
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVI----RSCCKLSYEHAQDI 405
P +L+E++ +L P R FS+ W ++S+G+V+D W G+T+I RS KL+Y+ AQDI
Sbjct: 728 PEVLTEQITNLVPNKSRFTFSVIWKIDSSGNVIDTWYGKTIISEPKRSSAKLTYDEAQDI 787
Query: 406 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
+D NTL + V ++IKSLY V+ IL +KR G +
Sbjct: 788 LD--------NTLSSD----------NQVTKNIKSLYHVATILHNKRKEKGV--FSQMRE 827
Query: 466 VFLFDEYGTPYDSVLS----GREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
F+ Y +V S ++ + + +EF+LLAN + A+ IA FPD ALLRRH P
Sbjct: 828 TLEFEVEDGDYQNVSSITAARKKSASIIVKEFLLLANTSVAQKIAMHFPDQALLRRHSPP 887
Query: 522 NMRKLREFEAFCSKH-GLQLDTSSSGQFHQSLEQARE-KLKDDYVLFDILINYATRPMQL 579
+ RK+ E + S + G+QLD++++ S+E +E KL+ L IL+ + +Q
Sbjct: 888 DPRKIHELCDYASNYLGVQLDSTNTSTLQHSIESIQEPKLRK---LVSILV---LKTLQT 941
Query: 580 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRM 639
YFC+G D + HYAL P++THFT+P RR+ D+VVHR L AAL AE+ ++
Sbjct: 942 PKYFCAGSV-DTAKFSHYALNAPLFTHFTAPSRRFADIVVHRQLEAALTAEEKHF----- 995
Query: 640 LPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRK 699
DKD + L A HCN +K
Sbjct: 996 ------------------VLDKDVVQKL------------------------AQHCNVKK 1013
Query: 700 LACRNVKDACVKLYMWILLKKK-------------EVLLSEARVLALGPRFMTIYIEKLA 746
A ++ + L K+ EA V+A+ +F + I L
Sbjct: 1014 DAAICAREQSSLTILSFYLHKQAQHSSILADNNGLSATFREAVVIAVFEQFFDVMIPDLN 1073
Query: 747 IERRIY 752
IERRI+
Sbjct: 1074 IERRIH 1079
>gi|148694117|gb|EDL26064.1| expressed sequence AV340375, isoform CRA_a [Mus musculus]
Length = 970
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 280/522 (53%), Gaps = 38/522 (7%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 290 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWEATSVYPNGHFVRVLGRIGDL 337
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +E RKDLR +F+IDP
Sbjct: 338 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEEQERKDLRTTHLVFSIDPK 397
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L +G +GVHIADV++FV P + +D+EA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSVRTLDNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP 457
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F + + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 518 FSIVDDIPELKALDKQSQQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQL 577
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 578 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 637
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKTLADSLDSAND--PKDPLVNKLLRSMATQAMSNALYFSTGSCA 695
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 736
>gi|350578986|ref|XP_003121783.3| PREDICTED: DIS3-like exonuclease 1-like [Sus scrofa]
Length = 1016
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/565 (32%), Positives = 286/565 (50%), Gaps = 57/565 (10%)
Query: 208 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--- 264
RID W S +P H + V GR G++E +I IL EN+I FS + +P
Sbjct: 355 VVRIDSWESTSMYPNGHFVRVLGRIGDLEGEIATILVENSISVVPFSEAQMCEMPVNTPE 414
Query: 265 -PWEVPQEELLSRKDLR-NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
PW+V EE RKDLR +F+IDP D+DD LS+ L +G +GVHIADV++FV
Sbjct: 415 NPWKVSSEEERKRKDLRKTHLVFSIDPRGCEDVDDTLSVRALDNGNLELGVHIADVTHFV 474
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDV 381
P + +DIEA+ R+T+ Y+ R+ MLP +LS +V SL GVDR A S+ W+L+ ++ ++
Sbjct: 475 APHSYIDIEARSRATTYYLADRRYDMLPSILSADVCSLLGGVDRYAVSVMWELDKTSHEI 534
Query: 382 VDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSL 441
+ W GRT+IRS KL YE AQ+++DG F + Q + ++V +I+ L
Sbjct: 535 KNVWYGRTIIRSAYKLFYEAAQELLDGNFSIVDDIPEFRDLDDKSRQAKLEELVWAIRKL 594
Query: 442 YEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTA 501
++++ ++ KR GAL LE + DE +D + +++ E M+LAN
Sbjct: 595 TDIARHIRAKRDLCGALELEGVEVRIQLDEKKNIHDLIPKQPLEVHETVAECMILANHWV 654
Query: 502 AEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
A+ I +FP ALLR+HP P+ E G +DT S+ SL+ A + +
Sbjct: 655 AKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDNAND--PN 712
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D ++ +L + AT+ M A YF +G ++ ++ HY LA YTHFTSP+RRY D++VHR
Sbjct: 713 DPIVNKLLRSMATQAMSNALYFSTGSCAEE-EFHHYGLALDKYTHFTSPIRRYSDIIVHR 771
Query: 622 TLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYG 681
L A+ +K +M K N +F +KD E
Sbjct: 772 LLMEAISKDK------KMEIKEN------------LFSNKDLEE---------------- 797
Query: 682 VPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKK-----EVLLSEARVLALGPR 736
+ H N+R A ++ + +L+ + K K E +S+ + ++
Sbjct: 798 ---------LCKHINNRNRAAQHCQKQSTELFQCMYFKDKDPDTEERCISDGVIYSIRTN 848
Query: 737 FMTIYIEKLAIERRIYYDEVEGLIV 761
+ ++I + I+ Y +GL++
Sbjct: 849 GVLVFIPRFGIKGAAYLKNKDGLVI 873
>gi|325281572|ref|YP_004254114.1| ribonuclease R [Odoribacter splanchnicus DSM 20712]
gi|324313381|gb|ADY33934.1| ribonuclease R [Odoribacter splanchnicus DSM 20712]
Length = 751
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 189/522 (36%), Positives = 254/522 (48%), Gaps = 74/522 (14%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
+RP G VV I+ER ++ VG + RS+ Y L PT
Sbjct: 133 RRPEGEVVEILER--KKGTFVGVVQ------------------RSA------NYAFLIPT 166
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ P V + P E GD V +I +W E P V+ V GR G
Sbjct: 167 GKQLPYDVFI----PTEHLNGAENGDK------VVVKIKDWPESQKNPVGEVIEVLGRPG 216
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ + ++NAI+ E + F P L +P ++P+EE+ R+D R FTIDP A
Sbjct: 217 DNDTEMNAIMAEYELPVK-FPPNVLKAAEKIPLDIPEEEIRKRRDCRELTTFTIDPKDAK 275
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D DDALS+ L +G+ VGVHIADVSY+V T LD EA R+TSVY++ R IPMLP L
Sbjct: 276 DFDDALSVRTLKEGVYEVGVHIADVSYYVKENTVLDKEAYARATSVYLVDRTIPMLPERL 335
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S V SL P D+L FS + L++ V+D+W GRTVIRS + +YE AQ+ I+G
Sbjct: 336 SNGVCSLRPDEDKLCFSAIFKLDANAQVLDQWFGRTVIRSNRRFTYEEAQERIEG----- 390
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 473
EG D I L +++ L+ RF GA+ + + F DE G
Sbjct: 391 -----AEG-----------DYREEILLLNRLAQKLRQDRFKAGAIDFDRVEVKFNLDEKG 434
Query: 474 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA------LLRRHPAPNMRKLR 527
P ++ N L EEFMLLANK AE I + P S + R H P KL
Sbjct: 435 HPVSVYFKRSKEANKLIEEFMLLANKKVAERIGK--PKSGKKAPTFVYRIHENPLPEKLE 492
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 587
EF F +K G L T S S+ ++KD +++ A R M A+Y
Sbjct: 493 EFNRFVAKFGYGLKTGSRKALTSSMNNLMAEVKDKPEQ-NMIETLAVRTMAKAAYSTD-- 549
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
+ GHY LAF YTHFTSP+RRYPD++VHR L L++
Sbjct: 550 -----NIGHYGLAFDYYTHFTSPIRRYPDVMVHRLLQRYLDS 586
>gi|156553452|ref|XP_001601829.1| PREDICTED: exosome complex exonuclease RRP44-like [Nasonia
vitripennis]
Length = 985
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/524 (34%), Positives = 272/524 (51%), Gaps = 63/524 (12%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA-KKNRSSLSVPDREYIQLTP 172
K PTGR+V II R +W Y G ++ A K+N L VP
Sbjct: 333 KTPTGRIVGIIRR--------------KWRQYCGILQRSALKENTRHLFVP--------- 369
Query: 173 THPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
K PK+ R+E A T+ + + ID W S +P H + G
Sbjct: 370 AERKIPKV-------------RIETRQAETLSKQRIIVAIDSWPRNSRYPLGHFVRALGE 416
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 291
G+ + + +L E+ + S FS E LS LP +PW + + ++ R+DLR+ + ++DP
Sbjct: 417 IGDKDTENEVLLLEHDVPHSRFSDEVLSFLPKLPWVITESDVAQRRDLRHIDVCSVDPPG 476
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
TD+DDAL L +G VGVHIADVS+F+ PGTALD EA +R+T+VY++ ++I M+P
Sbjct: 477 CTDIDDALHCRDLPNGNLEVGVHIADVSHFIRPGTALDKEAALRATTVYLVDKRIDMVPE 536
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
LLS + SL +R AFS W+++ +++ +++I S ++YE AQ ID K
Sbjct: 537 LLSSNLCSLRGNEERFAFSCVWEIDHEANIISIDYFKSIILSRAAMTYEEAQLKIDDKTQ 596
Query: 412 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD- 470
++ V +S+++L ++K LK +R +GAL L + + F D
Sbjct: 597 NDA-------------------VAKSLRNLNMLAKKLKKRRLENGALVLASPEIRFQVDS 637
Query: 471 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFE 530
E P D + N + EEFMLLAN + A+ I FP+ A+LRRHP P
Sbjct: 638 ETHDPIDVQAKQMRETNSMVEEFMLLANISVAKKILEEFPECAMLRRHPEPPQVNFDPLI 697
Query: 531 AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFK 589
G +++TSS + +SLE A+ K++ F+ ++ ATR M A YF SG
Sbjct: 698 KAGRHQGFEINTSSGKELAKSLEAAQ---KENNPYFNTMLKILATRCMMQAVYFTSG-MV 753
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
+T++ HY LA P+YTHFTSP+RRY D++VHR L + A+ Y
Sbjct: 754 QETEFFHYGLACPIYTHFTSPIRRYADVIVHRLLAVCVGADATY 797
>gi|194770788|ref|XP_001967470.1| GF20740 [Drosophila ananassae]
gi|190618480|gb|EDV34004.1| GF20740 [Drosophila ananassae]
Length = 983
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 265/522 (50%), Gaps = 59/522 (11%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
+ PTGR+V I+ R +W Y G + + D P
Sbjct: 348 RSPTGRIVGIVRR--------------KWRQYCGILQPSL--------IEDTSRHIFVPA 385
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
K P++ + + A ++ + + ID W S +P H + G G
Sbjct: 386 DRKIPRIRIETRQA------------AKLQNQRIIVTIDTWPRNSRYPHGHFVRSLGPLG 433
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
++ + IL E+ + FS E LS LP +PW + E+ R DLR+ I ++DP T
Sbjct: 434 DMATENEVILLEHDVPHCKFSEEVLSFLPKMPWTIKAEDYAKRVDLRDLYICSVDPPGCT 493
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL +L +G VGVHIADVS+F+ PG ALD EA R T+VY++ ++I M+P LL
Sbjct: 494 DIDDALHCRQLPNGNLEVGVHIADVSHFIRPGNALDKEAAARGTTVYLVGKRIDMVPELL 553
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL GV+R AFS W+++ +V+ + ++VI+S ++YE AQ +ID D
Sbjct: 554 SSNLCSLVGGVERFAFSCVWEVDHDANVISKRFHKSVIKSKRAMTYEEAQVLIDDPAD-- 611
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
++ +S+++L +++KILK +R +GAL L + + F D E
Sbjct: 612 -----------------QGEIAKSLRNLNKLAKILKKRRMDNGALVLASPEIRFQVDSET 654
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P + + N + EEFMLLAN T AE IA F + A+LRRHP P
Sbjct: 655 HEPLEVEAKQMRETNSMVEEFMLLANITVAEHIAAEFTECAVLRRHPRPPPTNFDPLVKA 714
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 591
G Q+D S + SL++ +K+D F+ +I TR M A YF SG + +
Sbjct: 715 ARYQGYQVDIESGLELAHSLDKC---VKEDNPYFNTMIRILTTRCMMQAVYFISGSLQKE 771
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
++ HY LA P+YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 772 -EYFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 812
>gi|148694119|gb|EDL26066.1| expressed sequence AV340375, isoform CRA_c [Mus musculus]
Length = 1023
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 280/522 (53%), Gaps = 38/522 (7%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 300 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 342
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 343 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWEATSVYPNGHFVRVLGRIGDL 390
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +E RKDLR +F+IDP
Sbjct: 391 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEEQERKDLRTTHLVFSIDPK 450
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L +G +GVHIADV++FV P + +D+EA+ R+T+ Y+ R+ MLP
Sbjct: 451 GCEDVDDTLSVRTLDNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP 510
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 511 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 570
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F + + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 571 FSIVDDIPELKALDKQSQQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQL 630
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 631 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 690
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 691 RECAKAKGFFIDTRSNKTLADSLDSAND--PKDPLVNKLLRSMATQAMSNALYFSTGSCA 748
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 749 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 789
>gi|166201905|sp|Q5U2P0.2|DI3L1_RAT RecName: Full=DIS3-like exonuclease 1
gi|149041955|gb|EDL95796.1| similar to expressed sequence AV340375, isoform CRA_c [Rattus
norvegicus]
Length = 1054
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 185/526 (35%), Positives = 285/526 (54%), Gaps = 46/526 (8%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWETTSVYPNGHFVRVLGRIGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +E R+DLR+ +F+IDP
Sbjct: 421 EGEIATILVENSINVVPFSEAQMCEMPVNTAENPWKVSPKEEQERRDLRSTHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDALS+ L++G +GVHIADV++FV P + +D+EA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDALSVRTLNNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 410 F----DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
F D+ TL E Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FSIVDDIPEFKTLEEQ----NRQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEV 656
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+
Sbjct: 657 RVQLDDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEF 716
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
E G +DT S+ SL+ A + D ++ +L + AT+ M A YF +
Sbjct: 717 FSELRECAKAKGFFIDTRSNKTLADSLDSAND--PSDPLVNKLLRSMATQAMSNALYFST 774
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
G ++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 775 GSCAEE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 819
>gi|71755977|ref|XP_828903.1| exosome complex exonuclease RRP44 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70834289|gb|EAN79791.1| exosome complex exonuclease RRP44, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 895
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 222/699 (31%), Positives = 345/699 (49%), Gaps = 62/699 (8%)
Query: 80 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPT------KRPTGRVVSIIERSPRRDGI 133
P T + + N+ N L+ M+S+ PT K+P+G V++++ER
Sbjct: 117 PDGRRITRWIRDTTMNNRKNREMWLAEMMSA-PTQHNWHGKKPSGSVIAVLERKH----- 170
Query: 134 VGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKK 193
L V + + S++ + DR + + P + V +D+P S+++
Sbjct: 171 -PLLFVARLADDALSSQE---------VIQDRRFYRFKVFDQLLPHIAVFGRDIPFSLRE 220
Query: 194 RLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGF 253
+ E + +E W ES FP A ++ FG + AI + I F
Sbjct: 221 SIRERFYLLRLETTTGGDIVW-VESRFPTARIISTFGSVHSLRANTFAICSAHHIVTDDF 279
Query: 254 SPESLSCLPCVPWEVPQEEL--LSRKDLR-NFCIFTIDPSTATDLDDALSIERLSDGISR 310
S E+ +C+P EE+ R+DLR + +IDP+TA DLDDALSI L G R
Sbjct: 280 SEEACNCIPDRLIIPNSEEMKRTGRRDLRREEFVCSIDPATARDLDDALSITLLPGGY-R 338
Query: 311 VGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFS 370
VGVHIADVS+FV PG+ALD E + R+TSVY++ R MLP LSEE SL+PG D+LAFS
Sbjct: 339 VGVHIADVSHFVSPGSALDEEGRARATSVYLVDRVYHMLPRKLSEEYCSLHPGSDKLAFS 398
Query: 371 IFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFE 430
+ L+ G + W G++VIR+ C+LSY+ AQ IIDG + G +
Sbjct: 399 AIFQLDLNGKLKGEWFGKSVIRNRCRLSYDDAQRIIDGNLTTLDALDYGGVTDRRELSQL 458
Query: 431 WSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSV---LSGREDLN 487
V S+K L++++ L+ F G L + F F++ P + + + + N
Sbjct: 459 KERVATSVKHLFDLASKLRAASFERGRLAFSTPEIGFHFEDISNPTHPIGFNVHRQIEAN 518
Query: 488 FLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQ 547
+L EEFMLLAN A+ I + PD A+LR HP P + + ++ ++L G+
Sbjct: 519 WLVEEFMLLANLRVAQKIVQYLPDQAILRVHPPPKRVLFEQLKLSLARVNIEL----KGR 574
Query: 548 FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD-FKDDTDWGHYALAFPVYTH 606
++SLEQ ++ D+ L D + + LA Y +G+ F + GHYAL YTH
Sbjct: 575 SNKSLEQLLNSVR-DHPLRDEISIMVKNTLSLAKYCTNGENFTNKVPLGHYALGLEWYTH 633
Query: 607 FTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAES 666
FTSP+RRY D++VHR L ALE E + V+G+ TG K A +
Sbjct: 634 FTSPIRRYADIIVHRQLLCALEIESI----------------VKGKHRTG----KTCAGA 673
Query: 667 LEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKK-KEVLL 725
+ G E + + ++ +++ N+A CN+ K A +V +A +KL+ LK + + +
Sbjct: 674 V-GMEVECLDSAEFFTSTYEVM-NIADECNENKRAADSVSEASLKLFFCHYLKSLRSLWV 731
Query: 726 SEARVLALGPRFMTIYIEKLAIERRI--YYDEVEGLIVE 762
S + PR + I +A E+++ Y V G+ VE
Sbjct: 732 SSNKEDPFIPRVDAVVI-SVAPEKKVLMLYARVVGISVE 769
>gi|148694118|gb|EDL26065.1| expressed sequence AV340375, isoform CRA_b [Mus musculus]
Length = 1053
Score = 281 bits (718), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 280/522 (53%), Gaps = 38/522 (7%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWEATSVYPNGHFVRVLGRIGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +E RKDLR +F+IDP
Sbjct: 421 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEEQERKDLRTTHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L +G +GVHIADV++FV P + +D+EA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLDNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F + + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FSIVDDIPELKALDKQSQQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDSAND--PKDPLVNKLLRSMATQAMSNALYFSTGSCA 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 819
>gi|395502696|ref|XP_003755713.1| PREDICTED: DIS3-like exonuclease 1 [Sarcophilus harrisii]
Length = 1055
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 207/658 (31%), Positives = 325/658 (49%), Gaps = 88/658 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR ++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIRDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I+ IL EN+I + FS + +P PW+V EE R DLR +F+IDP
Sbjct: 421 EGEISTILVENSISVAPFSEAQMCEMPVNTPENPWKVNPEEERERIDLRKTHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDALS+ LS+G +GVHIADV++FV+ + DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDALSVRTLSNGNLELGVHIADVTHFVMTNSYTDIEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L+ ++ W GRT+I+S KL YE AQD++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVLWELDKKSFEIKKVWYGRTIIQSAYKLYYEAAQDLLDGN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F V + + Q + ++V +I L ++++ ++ KR + GAL LE +
Sbjct: 601 FSVIGDIPEFKEMDEKSRQAKQDELVWAIGKLTDIARHVRAKRDSCGALELEGVEVRVQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWENFPHQALLRQHPPPHQEFFSEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL++A + D ++ IL + AT+ M A YF +G
Sbjct: 721 RECAKAKGFSMDTRSNKTLADSLDRAND--PRDPLVNRILRSMATQAMSNALYFSTGSCA 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
+D ++ HY LA YTHFTSP+RRY D+VVHR L AA+ K+N E
Sbjct: 779 ED-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAIS-------------KDNKTE-- 822
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F KD E + H N+R A ++ +
Sbjct: 823 ---IKENLFSSKDLEE-------------------------LCRHINNRNRAAQHAQKQS 854
Query: 710 VKLYMWILLKKKEVLLSEARVLALGPRF------MTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K+ +E R +A G + + ++I + I+ Y +GL++
Sbjct: 855 TELFQCMYFKDKDP-ETEDRCIADGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDGLVI 911
>gi|348501558|ref|XP_003438336.1| PREDICTED: exosome complex exonuclease RRP44-like [Oreochromis
niloticus]
Length = 951
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 186/523 (35%), Positives = 271/523 (51%), Gaps = 63/523 (12%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
++PTG+VV +I+R+ R G LNV+Q K +R TP
Sbjct: 337 RKPTGKVVGVIKRNWR--PFCGMLNVSQ---IKESTRH-----------------LFTPA 374
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A T+ + + ID W ++S +P H + G
Sbjct: 375 DRRIPRI-------------RIETRQASTLAGQRIMVAIDGWPKDSRYPNGHFVRSLGGA 421
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + E+++ R+DLR + ++DP
Sbjct: 422 GEKETEEEVLLLEHDVPHQAFSQAVLSFLPKMPWAITPEDMMKREDLRPLTVCSVDPPGC 481
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+VY+ ++I M+P L
Sbjct: 482 TDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDKEAANRGTTVYLCGKRIDMVPEL 541
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDRLAFS W++N +++ ++VI S L+Y AQ ID D
Sbjct: 542 LSSNLCSLRSNVDRLAFSCIWEINHKAEILKTRFTKSVINSKASLTYAEAQMRID---DT 598
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
++ D+ +S++ L +++KILK +R GAL L + + F D E
Sbjct: 599 NKND----------------DITKSLRGLNKLAKILKRQRIEKGALTLSSLEVRFHMDSE 642
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + N + EEFMLLAN + A+ I FP+ ALLR+HPAP
Sbjct: 643 THDPIDLQTKELMETNSMVEEFMLLANISVAQKIYDEFPECALLRKHPAPPPSNYDILIK 702
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
+++ T S+ SL+ A+ D + F+ L+ ATR M A YFCSG
Sbjct: 703 AAKSKEVEVHTDSAKALADSLDAAK---VDGFPYFNTLLRILATRCMMQAVYFCSG---M 756
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 757 DSDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAIGADTTY 799
>gi|27369724|ref|NP_766107.1| DIS3-like exonuclease 1 isoform 2 [Mus musculus]
gi|295293142|ref|NP_001171255.1| DIS3-like exonuclease 1 isoform 2 [Mus musculus]
gi|26325912|dbj|BAC26710.1| unnamed protein product [Mus musculus]
gi|34785201|gb|AAH56939.1| DIS3 mitotic control homolog (S. cerevisiae)-like [Mus musculus]
Length = 970
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 280/522 (53%), Gaps = 38/522 (7%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 247 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 289
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 290 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWEATSVYPNGHFVRVLGRIGDL 337
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +E RKDLR +F+IDP
Sbjct: 338 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEEQERKDLRTTHLVFSIDPK 397
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +D+EA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP 457
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 458 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 517
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F + + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 518 FSIVDDIPELKALDKQSQQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQL 577
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 578 DDKKNIRDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 637
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 638 RECAKAKGFFIDTRSNKTLADSLDSAND--PKDPLVNKLLRSMATQAMSNALYFSTGSCA 695
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 696 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 736
>gi|308809671|ref|XP_003082145.1| Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS)
[Ostreococcus tauri]
gi|116060612|emb|CAL55948.1| Exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3 (ISS)
[Ostreococcus tauri]
Length = 975
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 197/649 (30%), Positives = 318/649 (48%), Gaps = 103/649 (15%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP-DREYIQLTPTH 174
PTG+VV II R+ R G +++ + + KG A L VP DR
Sbjct: 363 PTGKVVGIIRRNWRERGYAASIDMGK--DGKGPKATGAGFTTRVLCVPSDR--------- 411
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
++PK+ + + L + +R + +D+W +S +P+ H + G G
Sbjct: 412 -RFPKIRIQTRQLEGLLDQR------------IVVVVDDWPADSAYPEGHYVKSLGVIGT 458
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELL--SRKDLRNFCIFTIDPSTA 292
V+ + A+L EN + F+P +C+P +PW V + L R+DLR+ + ++DP
Sbjct: 459 VDAETQALLLENDVDDRPFAPAVFACVPALPWRVTEHHLAEPGREDLRDLLVCSVDPPGC 518
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D+DDALS L D +GVHIADV+ F+ P TA+D EA R T+ Y++QR++ MLP
Sbjct: 519 KDIDDALSARELDDERIELGVHIADVTSFLHPNTAMDEEAARRGTTTYLVQRRLDMLPGA 578
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI----GRTVIRSCCKLSYEHAQDIIDG 408
L+ ++ SL G +RLAFS FW +N + + D I ++VI+S L+YE AQ ID
Sbjct: 579 LTTDICSLVGGEERLAFSAFWIVNKSTMLPDETIKPRFTKSVIKSAAALTYEQAQLRID- 637
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 468
TL + D+ S++ L ++++ L+ +R +GAL L + + F
Sbjct: 638 ------DATLND------------DLTLSLRRLRDIARRLRKRRMENGALTLASPEVKFE 679
Query: 469 FDEYGT-PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
D+ + P D + + N + EE MLLAN + AE I A+P +A+LRRHP P +
Sbjct: 680 MDQQSSDPLDVGMYVTRETNQMVEEMMLLANVSTAERILEAYPAAAMLRRHPIPEQKMFE 739
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY-ATRPMQLASYFCSG 586
G+ +D S++ +L+ A + D Y F+ L+ ATR M A Y SG
Sbjct: 740 PLLKTAKACGIDIDPSTNRSLAATLDAA-VRPGDSY--FNTLLRLQATRCMSQAVYCSSG 796
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 646
+ + HY LA P+YTHFTSP+RRY D++VHR L+AA+ + P++
Sbjct: 797 QYA-GPERMHYGLAMPLYTHFTSPIRRYADVIVHRLLSAAIG----------LCPRH--- 842
Query: 647 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 706
ESLE +D + +A CN R ++
Sbjct: 843 ------------------ESLE---------------SSDHVKAIADVCNIRHRNSQHAG 869
Query: 707 DACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDE 755
A V+L+ + +K+++++ +ARV + + +++ K IE + + E
Sbjct: 870 RASVELHTLVFFRKRKIVV-DARVFKVRANGLIVFVPKFGIEGPVLFHE 917
>gi|449438436|ref|XP_004136994.1| PREDICTED: exosome complex exonuclease RRP44-like [Cucumis sativus]
Length = 934
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 202/641 (31%), Positives = 303/641 (47%), Gaps = 103/641 (16%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RP GRV+ II+R+ W +Y GS S + Y
Sbjct: 337 RPAGRVIGIIKRN--------------WHSY-CGSLDPMPMPAGSGGI---AYALFVSKD 378
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ PK+ + + L + + KR+ +VA +D W+ S +P H + G G+
Sbjct: 379 RRIPKIRIQTRQLENLLDKRI----------IVA--VDSWDRLSRYPSGHYVRSIGEIGD 426
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 292
+ + +L EN I FS + ++CLP +PW V ++ + R+DLR+ +F++DP
Sbjct: 427 RDTESEVVLIENDINSRPFSSQVMTCLPPLPWSVSPVDIANPIRQDLRHLNVFSVDPPGC 486
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D+DDAL LS+G VGVHIADV+ FV PGTALD EA R TSVY+++R+I MLP
Sbjct: 487 KDIDDALHCTALSNGNFEVGVHIADVTNFVHPGTALDDEAAQRGTSVYLVERRIDMLPKP 546
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
L+E++ SL V+RLAFS+ W++ D+V +++I+S LSY AQ +D +
Sbjct: 547 LTEDICSLRADVERLAFSVIWEMTPEADIVSTSYTKSIIKSSAALSYVEAQARMDDSRLM 606
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
+ + R ++++ ++K ++ +R GAL L +++ F D E
Sbjct: 607 DP-------------------ITRDLRNMNALAKKMRLRRIERGALTLASAEVKFQIDTE 647
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + + N + EEFML AN + AE I + FP +LLRRHP P L
Sbjct: 648 THDPLDIGMYQIREANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPTPTKEMLEPLIR 707
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
GL LD SSS SL++A L DD ++ ATR M A YF SGD
Sbjct: 708 TAVAVGLDLDVSSSKALADSLDRA---LGDDPYFNKLIRILATRCMTQAVYFYSGDLS-P 763
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRG 651
++ HY LA +YTHFTSP+RRY D++VHR L A+L K
Sbjct: 764 PEYQHYGLAARLYTHFTSPIRRYADVIVHRLLAASLGIFK-------------------- 803
Query: 652 RFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVK 711
L +F D+ L +A + N R + A V+
Sbjct: 804 --LPTLFLDRPK------------------------LTTIADNLNYRHRNAQMAGRASVE 837
Query: 712 LYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
L+ I KK+ +EAR++ + +++ K IE +Y
Sbjct: 838 LHTLIYFKKRPT-DTEARIVKIRSNGFIVFVPKFGIEGPVY 877
>gi|50511205|dbj|BAD32588.1| mKIAA1955 protein [Mus musculus]
Length = 1073
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 280/522 (53%), Gaps = 38/522 (7%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 350 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 392
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 393 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWEATSVYPNGHFVRVLGRIGDL 440
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +E RKDLR +F+IDP
Sbjct: 441 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEEQERKDLRTTHLVFSIDPK 500
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +D+EA+ R+T+ Y+ R+ MLP
Sbjct: 501 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP 560
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 561 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 620
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F + + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 621 FSIVDDIPELKALDKQSQQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQL 680
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 681 DDKKNIRDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 740
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 741 RECAKAKGFFIDTRSNKTLADSLDSAND--PKDPLVNKLLRSMATQAMSNALYFSTGSCA 798
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 799 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 839
>gi|91088453|ref|XP_969131.1| PREDICTED: similar to exosome complex exonuclease RRP44 [Tribolium
castaneum]
Length = 844
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 173/478 (36%), Positives = 264/478 (55%), Gaps = 23/478 (4%)
Query: 164 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 223
++EY TP + PK+ + P + + + + L +I +W ++ +
Sbjct: 234 NKEYALFTPRDKRIPKIKIPRISWPSGFQSKPQ----LYQDILFIVKITDW-KDVKYAIG 288
Query: 224 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFC 283
+ G G+++ + AIL E + + F + LP ++ +L +R+DLR C
Sbjct: 289 TITENLGLSGDLKIESLAILREFCLDPTPFGDDIRPFLP-KSTKISTSDLKNREDLRKEC 347
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
+FTIDP TA DLDDALS + L +G VGVHI+D S+F+ T LD + ++T++YM+
Sbjct: 348 VFTIDPITARDLDDALSCKELPNGNYEVGVHISDASFFLPENTRLDEIVKSKATTIYMVD 407
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
MLPV L SL PG D+LAFS+FW+L GD+VD I R+VI SC +L+YEHAQ
Sbjct: 408 SVYHMLPVELCFHC-SLLPGEDKLAFSVFWELTPTGDIVDFRIKRSVINSCVQLAYEHAQ 466
Query: 404 DIIDG---KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 460
+ID KF+ + P++Y F D+ + + L ++ L++KR +G+L++
Sbjct: 467 VMIDDPDRKFE-------RDELPEIYNGFNAHDLSKRVNDLQRIAVCLREKRRQNGSLKI 519
Query: 461 ENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 519
K F+ D G P + + + + L EEFMLLAN T A+ I A+PD A LR H
Sbjct: 520 NQIKIGFVLDPATGEPKEFYICENKPAHRLIEEFMLLANMTVAKWINEAYPDLAFLRLHE 579
Query: 520 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY--VLFDILINYATRPM 577
AP + E + GL +D S+SG SL + +DD+ +L + +PM
Sbjct: 580 APKPTMMTELQKSLETLGLHIDISTSGGIQASLNKYIS--EDDFGKARMIVLNHLLAKPM 637
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE-AEKLYW 634
+ A YFC+G +++ D+ HYAL+ P+YTHFTSP+RRY D++VHR L A+L EK W
Sbjct: 638 KRARYFCAGALEEELDYSHYALSIPIYTHFTSPIRRYADIMVHRLLAASLNYREKPTW 695
>gi|91088779|ref|XP_967442.1| PREDICTED: similar to SD10981p [Tribolium castaneum]
Length = 943
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 200/596 (33%), Positives = 290/596 (48%), Gaps = 89/596 (14%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PTGRVV II R R+ G L +GG D Y P
Sbjct: 318 KPTGRVVGIIRRKWRQ--YCGIL--------QGGI--------------DGVYQMFVPAD 353
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
PK+ I+ R E + + + ID W + S +P H + G G+
Sbjct: 354 KSIPKI---------KIETRQAE---FLRTQKLIVTIDSWPKHSRYPHGHFVRALGNIGD 401
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 294
+ IL E+ + S FS E L+CLP +PW + +++ R DLR+ I ++DP TD
Sbjct: 402 QTTENEVILLEHDVPHSQFSEEVLNCLPKMPWIITDDDVKKRVDLRHLDICSVDPPGCTD 461
Query: 295 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 354
+DDAL L+DG VGVHIADVS+F+ PGT LD EA R+T+VY++ +I M+P LLS
Sbjct: 462 IDDALHCRPLADGKLEVGVHIADVSHFIRPGTPLDREAASRATTVYLVNNRIDMVPALLS 521
Query: 355 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 414
+ SL G +R AFS W+++ +++ +++I+S ++YE AQ IID K
Sbjct: 522 SNLCSLRGGEERFAFSCIWEMDQNANILSTRFHKSIIKSRKAMTYEEAQLIIDDK---TK 578
Query: 415 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYG 473
+ L E +++SL +++KI+K +R +GAL L + + D E
Sbjct: 579 QDALAE----------------ALRSLNKLAKIMKQRRLVNGALVLASPEVKIQMDSETM 622
Query: 474 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 533
P D + + N + EEFML AN + AE I FPD A+LRRHP P
Sbjct: 623 EPLDVEVKKLFETNSMIEEFMLQANISVAEKILEEFPDCAMLRRHPVPPATNFDPLVKAG 682
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYV--LFDILINYATRPMQLASYFCSGDFKDD 591
G ++ S +SL++A K+ Y+ +F IL ATR M A YF SG ++ +
Sbjct: 683 RHLGFEIRVDSGKNLAKSLDEAVNT-KNPYLNTMFRIL---ATRCMLQAVYFVSGTYQKE 738
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHRE---- 647
++ HY LA P+YTHFTSP+RRY D++VHR L A+ Y +L KN E
Sbjct: 739 -EYFHYGLAVPLYTHFTSPIRRYADIIVHRLLAVICGADSTYPD---LLDKNKTTELCQN 794
Query: 648 -GVRGR-----------FLTGIFYDKDAAESLEG------REALSVAALKYGVPCA 685
R R F T +F+ K + EG + AL V +YG+ C
Sbjct: 795 LNYRNRMAQYAGRASIAFNTHLFF-KGKLQDEEGYVLYVRKNALQVLIPRYGLECT 849
>gi|270012315|gb|EFA08763.1| hypothetical protein TcasGA2_TC006450 [Tribolium castaneum]
Length = 951
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 200/596 (33%), Positives = 290/596 (48%), Gaps = 89/596 (14%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PTGRVV II R R+ G L +GG D Y P
Sbjct: 326 KPTGRVVGIIRRKWRQ--YCGIL--------QGGI--------------DGVYQMFVPAD 361
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
PK+ I+ R E + + + ID W + S +P H + G G+
Sbjct: 362 KSIPKI---------KIETRQAE---FLRTQKLIVTIDSWPKHSRYPHGHFVRALGNIGD 409
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 294
+ IL E+ + S FS E L+CLP +PW + +++ R DLR+ I ++DP TD
Sbjct: 410 QTTENEVILLEHDVPHSQFSEEVLNCLPKMPWIITDDDVKKRVDLRHLDICSVDPPGCTD 469
Query: 295 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 354
+DDAL L+DG VGVHIADVS+F+ PGT LD EA R+T+VY++ +I M+P LLS
Sbjct: 470 IDDALHCRPLADGKLEVGVHIADVSHFIRPGTPLDREAASRATTVYLVNNRIDMVPALLS 529
Query: 355 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 414
+ SL G +R AFS W+++ +++ +++I+S ++YE AQ IID K
Sbjct: 530 SNLCSLRGGEERFAFSCIWEMDQNANILSTRFHKSIIKSRKAMTYEEAQLIIDDK---TK 586
Query: 415 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYG 473
+ L E +++SL +++KI+K +R +GAL L + + D E
Sbjct: 587 QDALAE----------------ALRSLNKLAKIMKQRRLVNGALVLASPEVKIQMDSETM 630
Query: 474 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 533
P D + + N + EEFML AN + AE I FPD A+LRRHP P
Sbjct: 631 EPLDVEVKKLFETNSMIEEFMLQANISVAEKILEEFPDCAMLRRHPVPPATNFDPLVKAG 690
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYV--LFDILINYATRPMQLASYFCSGDFKDD 591
G ++ S +SL++A K+ Y+ +F IL ATR M A YF SG ++ +
Sbjct: 691 RHLGFEIRVDSGKNLAKSLDEAVNT-KNPYLNTMFRIL---ATRCMLQAVYFVSGTYQKE 746
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHRE---- 647
++ HY LA P+YTHFTSP+RRY D++VHR L A+ Y +L KN E
Sbjct: 747 -EYFHYGLAVPLYTHFTSPIRRYADIIVHRLLAVICGADSTYPD---LLDKNKTTELCQN 802
Query: 648 -GVRGR-----------FLTGIFYDKDAAESLEG------REALSVAALKYGVPCA 685
R R F T +F+ K + EG + AL V +YG+ C
Sbjct: 803 LNYRNRMAQYAGRASIAFNTHLFF-KGKLQDEEGYVLYVRKNALQVLIPRYGLECT 857
>gi|145354208|ref|XP_001421383.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581620|gb|ABO99676.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 668
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 193/532 (36%), Positives = 268/532 (50%), Gaps = 46/532 (8%)
Query: 109 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 168
++ +K TGRVV I R+ +V L+V + K +R + R
Sbjct: 88 TTTTSKVRTGRVVGITHRATL--DVVACLDVVDEEDLKSDARGE------------RNGA 133
Query: 169 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
P K K+ +L + D + +R RID W +P H++ +
Sbjct: 134 LCVPMDSKIVKVKLLTRRARDLVGQRF------------IVRIDRWLANQRYPSGHLVKI 181
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEELLSRKDLRNFCIFT 286
G GEV+ ++ A+L I F +L+ LP W VP+EE+ R+DLR+ +
Sbjct: 182 LGGVGEVDGEMAALLARYDIPAEPFGARALAELPREGADWMVPKEEIEKRRDLRHHRACS 241
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP TD+DDALS+ +D + +GVHIADVSYFV PGT LD EAQ+R T+VY++ R++
Sbjct: 242 IDPPGCTDVDDALSVHVSADRVE-IGVHIADVSYFVRPGTLLDHEAQMRGTTVYLVDRRL 300
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP LLSE + SL DRLA S W L+ DVVD W+GRTVI S +++Y AQ I
Sbjct: 301 DMLPSLLSENLASLLERRDRLAVSCVWTLDRNLDVVDVWLGRTVIHSRHQMTYYQAQAIH 360
Query: 407 DGK--FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
DG+ +SS+T + E V +++L + R GA+ LE+++
Sbjct: 361 DGQPLPHGDSSDT--------FDAVERELVRGDLQTLVAFANKTNAIRLAHGAVELESAE 412
Query: 465 PVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
F D + TP + + + + E M+LAN AA RAFP ALLRRH P
Sbjct: 413 LRFETDAQTKTPTEVLQKDEVPMMRVVAELMILANSAAARTTHRAFPSRALLRRHAPPRE 472
Query: 524 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 583
E + G++LD SS + SL AR + + + ATR M A Y
Sbjct: 473 GGFEELTKLAAAKGIELDGSSGEALNASL--ARVAATSEPEVTTLFRGLATRAMSEAQYI 530
Query: 584 CSGDFKD-DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL---EAEK 631
SG D +GHY LA YTHFTSP+RRY D+VVHR L AA+ EAEK
Sbjct: 531 SSGSISGADGGFGHYGLALTYYTHFTSPIRRYADVVVHRQLIAAVDVAEAEK 582
>gi|295293138|ref|NP_001001295.2| DIS3-like exonuclease 1 isoform 1 [Mus musculus]
gi|166201904|sp|Q8C0S1.2|DI3L1_MOUSE RecName: Full=DIS3-like exonuclease 1
Length = 1053
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 181/522 (34%), Positives = 280/522 (53%), Gaps = 38/522 (7%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWEATSVYPNGHFVRVLGRIGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 290
E +I IL EN+I FS + +P PW+V +E RKDLR +F+IDP
Sbjct: 421 EGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEEQERKDLRTTHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L++G +GVHIADV++FV P + +D+EA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F + + + Q + ++V +I L ++++ ++ KR GAL LE +
Sbjct: 601 FSIVDDIPELKALDKQSQQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKKNIRDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDSAND--PKDPLVNKLLRSMATQAMSNALYFSTGSCA 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK 819
>gi|417405713|gb|JAA49560.1| Putative exosomal 3'-5' exoribonuclease complex subunit [Desmodus
rotundus]
Length = 1054
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 200/657 (30%), Positives = 326/657 (49%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSREE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V R+D W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RVDSWESTSVYPNGHFVRVLGRIGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I + FS + +P PW V EE R+DLR +F+IDP
Sbjct: 421 EGEIATILVENSISVAPFSEAQMCEMPVNTPEKPWTVSPEEERERRDLRKTHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L+DG +GVHIADV++FV P + +DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDTLSVRTLNDGALELGVHIADVTHFVKPNSCIDIEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L+ ++ W GRT+IRS KL YE AQ+++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLCYEAAQELLDGN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F++ + + + ++V ++ L ++++ ++ KR GAL LE +
Sbjct: 601 FNIIDDIPEFRDLDETSRRAKLEELVWAVGKLTDIARHVRAKRDRCGALELEGVEVRVQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
DE +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DEQKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 721 RECAKAKGFFIDTRSNKTLADSLDNAND--PNDPIVNRLLRSMATQAMSNALYFSTGSCS 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K +M K N
Sbjct: 779 EE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISNDK------KMEIKEN----- 826
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 827 -------LFSNKDLEE-------------------------LCRHINNRNRAAQHSQKRS 854
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E + + + ++ + ++I + I+ Y +GL++
Sbjct: 855 TELFQCMYFKDKGQETEERCVCDGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDGLVI 911
>gi|195490030|ref|XP_002092972.1| GE21064 [Drosophila yakuba]
gi|194179073|gb|EDW92684.1| GE21064 [Drosophila yakuba]
Length = 1083
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 158/410 (38%), Positives = 229/410 (55%), Gaps = 9/410 (2%)
Query: 223 AHVLHVFGRGGEVEPQINAILYENAIC-CSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 281
A ++ GR G ++ ++ AIL+ N + F P + +++L RKDLR
Sbjct: 506 AELIQPVGRVGNLDDELKAILFHNGLRDIKPFEQRFNDMYSQPPPPISKDDLRQRKDLRK 565
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
CIFTIDP TA DLDDA+SIE+L + VGVHI+DVS+++L LD + RSTS+Y+
Sbjct: 566 VCIFTIDPMTARDLDDAVSIEKLGENEYEVGVHISDVSHYLLEDNELDNIVKERSTSIYL 625
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW--IGRTVIRSCCKLSY 399
I MLP L SL PG D+ AFS+FW +N G ++ + RTVI SC + +Y
Sbjct: 626 ANEVIHMLPQTLCMRC-SLLPGEDKFAFSVFWRMNGEGTMLQKKPEFCRTVINSCSQFAY 684
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
EHAQ IID + + N +P + F D+ + L++++ ++ RF +G+L
Sbjct: 685 EHAQKIIDNPNERFTEN----DFPTILNGFNSDDIKNRVLWLHDIASSIRKTRFDNGSLT 740
Query: 460 LENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
+ N+K F+ D G P + + + N L EEFMLLAN+ A I +FPD A+LR H
Sbjct: 741 INNAKLRFVLDPVSGEPLSFEVEKQREANRLIEEFMLLANQAVARFIHDSFPDIAVLRNH 800
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQ 578
P P + L+ G +LD SSS +S+ + + + + L +PM
Sbjct: 801 PPPLTKSLKSLREKLLVLGFELDYSSSKALQESMVRLCNEAPNPVAMNACLSQLLMKPMA 860
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
A+YFCS + D HYAL+ P+YTHFTSP+RRYPD++VHR L AAL+
Sbjct: 861 RATYFCSEGKAEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALK 910
>gi|409099069|ref|ZP_11219093.1| ribonuclease R [Pedobacter agri PB92]
Length = 710
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 162/429 (37%), Positives = 229/429 (53%), Gaps = 34/429 (7%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V + +W E + P V HV G GE ++NAIL + F P+ +P
Sbjct: 187 VLVTLSDWPESAKNPIGIVKHVLGNQGENNTEMNAILAQYGFPLE-FPPQVEKEANAIPE 245
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
E+P +E+ RKD RN FTIDP+ A D DDA+S ++L +G +GVHIADVS++V+ GT
Sbjct: 246 EIPADEIAKRKDFRNVLTFTIDPADAKDFDDAISYQKLPNGNHEIGVHIADVSHYVIQGT 305
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R IPMLP LS V SL P D+L F+ ++L+ ++ W
Sbjct: 306 DLDKEAYSRATSVYLVDRVIPMLPERLSNGVCSLRPNEDKLCFAAVFELDEQANIQSEWY 365
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
GRTVI S + SYE AQ++I+ K EG D I L E++
Sbjct: 366 GRTVIHSDRRFSYEEAQEVIENK----------EG-----------DYATEILKLNELAY 404
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
IL+D++F +GA+ E+++ F DE G P + R+D + L E++MLLAN+ AE +A
Sbjct: 405 ILRDRKFKNGAISFESTEVKFKLDESGKPIGVYVKERKDAHKLIEDYMLLANRKVAEFVA 464
Query: 507 RAFPDSALL----RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
+ L R H +PNM L F F S+ G +++T S + +SL ++
Sbjct: 465 KKQKGEKKLTFVYRVHDSPNMETLNTFATFASRFGYKINTKSDKEIAKSLNHLMADVEGK 524
Query: 563 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
+IL + A R M A Y HY LAF YTHFTSP+RRYPD++ HR
Sbjct: 525 KEQ-NILTSLAIRSMAKAIYSTK-------KTSHYGLAFEYYTHFTSPIRRYPDVMAHRL 576
Query: 623 LNAALEAEK 631
L L+ K
Sbjct: 577 LQTYLDGGK 585
>gi|145352079|ref|XP_001420386.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580620|gb|ABO98679.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 962
Score = 279 bits (713), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 201/689 (29%), Positives = 329/689 (47%), Gaps = 117/689 (16%)
Query: 77 GHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGF 136
G P T+D T+ ++ + G+ PTG+VV II R+ R G
Sbjct: 321 GLAPETADETDVAVAATKASGVV----------------PTGKVVGIIRRNWRERGYAAS 364
Query: 137 LNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLE 196
+++ + + KG + L VP + ++PK+ + + L + +R
Sbjct: 365 VDMGR--DGKGPTAAGGGFASRVLCVP---------SDRRFPKIRIQTRQLEGLLDQR-- 411
Query: 197 EGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPE 256
+ ID+W +S +P+ H + G G V+ + A+L EN + F+P
Sbjct: 412 ----------IVVVIDDWPADSMYPEGHYVKSLGLIGSVDAETQALLLENDVDDRPFAPA 461
Query: 257 SLSCLPCVPWEVPQEELL--SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
+C+P +PW+V + L R+DLR+ + ++DP D+DDALS + D +GVH
Sbjct: 462 VYACVPALPWKVTDDHLAEPGREDLRDLLVCSVDPPGCKDIDDALSARDIDDERIEIGVH 521
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADV+ F+ P TA+D EA R T+ Y++QR++ MLP L+ ++ SL G +RLAFS FW
Sbjct: 522 IADVTSFLFPDTAMDEEAARRGTTTYLVQRRLDMLPGALTTDICSLVGGQERLAFSAFWI 581
Query: 375 LNSAGDVVDRWI----GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFE 430
+ + + D + ++VI+S L+YE AQ ID S N
Sbjct: 582 VQKSTMLPDETVKPRFTKSVIKSAAALTYEQAQTRIDDA----SLN-------------- 623
Query: 431 WSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT-PYDSVLSGREDLNFL 489
D+ S++ L +V++ L+ +R +GAL L + + F D+ + P D + + N +
Sbjct: 624 -DDLTLSLRRLRDVARQLRKRRMANGALTLASPEVRFEMDQQSSDPLDVGMYVTRETNQM 682
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFH 549
EE MLLAN + AE I +A+P +A+LRRHP P + G+ +DT S+
Sbjct: 683 VEEMMLLANVSTAERILQAYPAAAMLRRHPIPEQKMFEPLLKAAKACGVDIDTQSNRTLA 742
Query: 550 QSLEQAREKLKDDYVLFDILINY-ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 608
SL+ A ++ + F+ L+ ATR M A Y SG + + HY LA P+YTHFT
Sbjct: 743 ASLDAA---VRPEDAYFNTLLRLQATRCMSQAVYCSSGQYA-GPERMHYGLAMPLYTHFT 798
Query: 609 SPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLE 668
SP+RRY D++VHR L+AA+ L +H+ SLE
Sbjct: 799 SPIRRYADVIVHRLLSAAI---GLCPRHK----------------------------SLE 827
Query: 669 GREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEA 728
+D + +VA CN R + A V+L+ + +K+++ +++A
Sbjct: 828 D---------------SDHVKSVADVCNVRHRNSQQAGRASVELHTLVFFRKRKI-VADA 871
Query: 729 RVLALGPRFMTIYIEKLAIERRIYYDEVE 757
RV + + +++ K IE + + E E
Sbjct: 872 RVFKVRANGLVVFVPKFGIEGPVLFVEGE 900
>gi|71412692|ref|XP_808518.1| ribonuclease II-like protein [Trypanosoma cruzi strain CL Brener]
gi|70872742|gb|EAN86667.1| ribonuclease II-like protein, putative [Trypanosoma cruzi]
Length = 892
Score = 279 bits (713), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 215/656 (32%), Positives = 326/656 (49%), Gaps = 58/656 (8%)
Query: 82 TSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIER-SPRRDGIVGFLNVN 140
D+T + SS + A L+ + + K+P G VV+++ER SP V
Sbjct: 139 VQDTTRRDDSSPERQW--ARRMLAPTVHDWGNKKPFGVVVAVLERRSP-------LFVVA 189
Query: 141 QWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA 200
+ + K +R Y + P P + V +D+P + L++
Sbjct: 190 RLCDDALAPNDIVKSDR---------YYKFKCFDPLMPNIAVFGRDIPVPLHATLKK--T 238
Query: 201 TIEMELVAARIDEWNEES-PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 259
+ LV E+ + F ++ V G V A+ I + FS E+ +
Sbjct: 239 FFFLRLVTRGDGEFFWTAWKFLTGKIVRVLGGVDSVRANSFALCNAFEISMNDFSDEAYA 298
Query: 260 CLPCVPWEVPQEELL---SRKDLRNF-CIFTIDPSTATDLDDALSIERLSDGISRVGVHI 315
C+P +EVP +++L R+DLR + +IDP+TA DLDDALSI G RVGVHI
Sbjct: 299 CVP-EEFEVPDKQVLLHMGRRDLREEEFVCSIDPATARDLDDALSITSTPGGY-RVGVHI 356
Query: 316 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 375
ADVSYFV G+ LD EA+ RSTSVY++++ IPMLP LSE+ SLNPG D+ AFS + L
Sbjct: 357 ADVSYFVSAGSPLDEEARERSTSVYLVEQVIPMLPRKLSEDYCSLNPGSDKFAFSCIFHL 416
Query: 376 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVV 435
+ G+V W G++VIR+ C+L+YE AQ I+DG V + G+ + + +
Sbjct: 417 DHHGNVKSEWFGQSVIRNRCRLTYEDAQRILDGDKTVFDTLDFGD---EKDVRHLCVRIE 473
Query: 436 RSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT---PYDSVLSGREDLNFLFEE 492
SI++L+E++ ++ G L + N K +LF++ PY +S + + N+L EE
Sbjct: 474 VSIRTLFELASKMRSASMNRGRLTIGNMKVRYLFEDIANPTFPYGFGISRQIEANWLVEE 533
Query: 493 FMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSL 552
FMLLAN AE I PD ALLRRH P+ +KL + S GL+L SS L
Sbjct: 534 FMLLANARVAEKIVEYMPDQALLRRHEPPDRKKLLTLKEALSSVGLELRGGSSKSLQGFL 593
Query: 553 EQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLR 612
E + D Y +++ Y+ ++ A YF +G + + GHYALA P YTHFTSP+R
Sbjct: 594 ENTKN--SDFYDELCVVLKYS---LKQAVYFVNGCEETEAYRGHYALALPWYTHFTSPIR 648
Query: 613 RYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREA 672
RY D++ HR L ALE E + K + PK G +A
Sbjct: 649 RYSDIIAHRQLLCALEIESIV-KESKGGPKERRHPVSPGSI-----------------DA 690
Query: 673 LSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEA 728
++ KY P +++ ++ N +K+ R V DA + ++ LK + ++ E+
Sbjct: 691 NQLSTRKYFYPVSEV-ESIVEKANLKKIKARQVSDASLGIFFCYYLKALKRVMDES 745
>gi|195011855|ref|XP_001983352.1| GH15630 [Drosophila grimshawi]
gi|193896834|gb|EDV95700.1| GH15630 [Drosophila grimshawi]
Length = 1109
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 157/412 (38%), Positives = 233/412 (56%), Gaps = 16/412 (3%)
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSP-----ESLSCLPCVPWEVPQEELLSRK 277
A ++ GR G +E ++ AIL+ N + P + P P V +++L++R+
Sbjct: 538 ADLVQPVGRVGNLEDELKAILFHNNL--RDVVPFEQRFNEMYAQPAAP--VGEKDLVNRR 593
Query: 278 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 337
D+R C+FTIDP TA DLDDALSIE+L + ++GVHI+DVS+++ + LD + RST
Sbjct: 594 DMRKQCVFTIDPLTARDLDDALSIEQLDENKYQIGVHISDVSHYLEENSELDNIVKKRST 653
Query: 338 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI-GRTVIRSCCK 396
S+Y+ I MLP L SL PG D+ AFS+FW +++ G +D+ + R+VI SC +
Sbjct: 654 SIYLANEVIHMLPQPLCFRC-SLLPGEDKYAFSVFWYMDAKGKQLDKPVFTRSVINSCTQ 712
Query: 397 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 456
+YEHAQ IID + +P + F D+V+ + L +++ ++ +RF +G
Sbjct: 713 FAYEHAQKIIDNP----GEQFTADDFPSILNGFSVEDIVKRVTWLNAIARNMRSERFVNG 768
Query: 457 ALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 515
AL + N+K F D G P L + + N + EEFMLLAN+ A I AFP+ A+L
Sbjct: 769 ALTINNAKVRFNLDPLSGEPIGFELEKQREANHMIEEFMLLANQAVARFIHDAFPNIAIL 828
Query: 516 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 575
R HP P + L+ G LD SSS S+++ + D + L +
Sbjct: 829 RHHPPPLTKSLKALREKLLSRGYDLDYSSSKSLQASMQRLCNEANDPVAMTACLSQLLMK 888
Query: 576 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
PM A+YFCS + +D HYAL+ P+YTHFTSP+RRYPD++VHR L A L
Sbjct: 889 PMARANYFCSEGKTEASDLWHYALSIPIYTHFTSPIRRYPDVMVHRLLAAGL 940
>gi|320169827|gb|EFW46726.1| mitotic control protein dis3 [Capsaspora owczarzaki ATCC 30864]
Length = 1191
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 187/564 (33%), Positives = 279/564 (49%), Gaps = 68/564 (12%)
Query: 87 EKVSSSQQNDGMNAIERLSAMI--SSYPTKRPTGRVVSIIERSPRRD-GIVGFLNVNQWF 143
E ++S+ ++ E + + + SS +RPTG VV I+ R+ R G+V +
Sbjct: 367 EAIASTVADEQAAVAEAVDSAVVGSSSDARRPTGIVVGILRRAWRPSCGMV----IPVES 422
Query: 144 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 203
+ G S + + PT ++P + V + +++R
Sbjct: 423 DSNGPSSDNGPTQ-----------LLFVPTDTRFPHVRVQTRRPQAYLEQR--------- 462
Query: 204 MELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
V ID W+ S P+ H++ G GE + +L E+ + S FSP L+ LP
Sbjct: 463 ---VVVTIDRWHRGSRLPEGHLVRALGPIGEKMTETEVLLVEHEVRHSDFSPAVLADLPV 519
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
+PW + + + +R+D + I ++DP TD+DDAL + L +G VGVHIADVS+F+
Sbjct: 520 LPWVITEADRAARRDFTHLDICSVDPPGCTDIDDALHVRPLENGNWEVGVHIADVSHFIK 579
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG---- 379
P TA+D+EA R TSVY++ R+I M+P LL E+ SL V+R A S+ W++ G
Sbjct: 580 PNTAIDLEAARRGTSVYLIGRRIDMIPELLGTELCSLQSDVERFAMSVVWEITPPGKPDP 639
Query: 380 ---------DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFE 430
++V R++IRS L+Y AQ +ID D + L G
Sbjct: 640 VDGACRTGAEIVRTEYCRSIIRSRASLTYMQAQTMID---DQTRRDPLSHG--------- 687
Query: 431 WSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFL 489
++ L E+SK+L+ +R G L LE+ + F D + P D + +
Sbjct: 688 -------LRGLNELSKVLRQRRLDRGTLTLESPEISFSLDKDTSDPVDVGAKQKLQTMSM 740
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFH 549
EEFMLLAN AE I R FP A+LRRHP P +HG+++ S+S +
Sbjct: 741 VEEFMLLANVAVAEHIFRRFPQCAVLRRHPVPPQASFEPLVVAARQHGVEIKASNSKELA 800
Query: 550 QSLEQARE---KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTH 606
+SL++A E K Y L +L ATR M A YFCSG + HY LA P+YTH
Sbjct: 801 ESLDRAEESFGKAGKPY-LGKLLRILATRCMMQAVYFCSGTLP-TREHQHYGLACPIYTH 858
Query: 607 FTSPLRRYPDLVVHRTLNAALEAE 630
FTSP+RRYPD++VHR L A+ E
Sbjct: 859 FTSPIRRYPDVLVHRLLAVAIGLE 882
>gi|195440166|ref|XP_002067913.1| GK11362 [Drosophila willistoni]
gi|194163998|gb|EDW78899.1| GK11362 [Drosophila willistoni]
Length = 1235
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/411 (38%), Positives = 231/411 (56%), Gaps = 13/411 (3%)
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ---EELLSRKDL 279
A ++ GR G +E ++ AIL+ N + P E P +L +R DL
Sbjct: 589 ADLIQPVGRVGNLEDELKAILFHNGL--RDIKPYKQHFEDLFSEEAPPVTPNDLHNRCDL 646
Query: 280 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 339
R CIFTIDP TA DLDDA+SIE+L D + VGVHI+DVS+++L LD + RSTS+
Sbjct: 647 RTKCIFTIDPLTARDLDDAMSIEKLDDNVFEVGVHISDVSHYLLEDGELDNIVKERSTSI 706
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKL 397
Y++ + I MLP L SL PG+D+ AFS+FW +N+ G ++ + R+VI SC +
Sbjct: 707 YLVNQVIHMLPRALCLRC-SLLPGIDKFAFSVFWKMNANGQLLCPEPVFTRSVINSCTQF 765
Query: 398 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 457
+YEHAQ IID + N + +P + F DV+ + L+ +++ ++ RF GA
Sbjct: 766 AYEHAQKIIDNPHE----NFADDDFPSILNGFHVEDVMERVLWLHNIAQNMRKARFEQGA 821
Query: 458 LRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 516
L + N+K F D G P + + + N + EEFMLLAN++ A I +P+ +LR
Sbjct: 822 LTINNAKLRFTLDPLNGEPISFEVEKQREANRMIEEFMLLANQSVARHIHTKYPEICVLR 881
Query: 517 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 576
HP P ++ L+ G LD SSS +S+ + ++ D + L +P
Sbjct: 882 NHPPPLVKSLKSLREKFVALGFDLDYSSSKTLQESMVRLCQEAPDPIAMNACLSQLLMKP 941
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
M ASYFCS + +D HYAL+ P+YTHFTSP+RRYPD++VHR L A+L
Sbjct: 942 MARASYFCSEGKTEPSDLWHYALSIPIYTHFTSPIRRYPDVMVHRLLAASL 992
>gi|384252329|gb|EIE25805.1| RNB-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 1751
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 167/430 (38%), Positives = 232/430 (53%), Gaps = 19/430 (4%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP---- 265
R+D W ES P H + G ++ + +A+L + I FS +++ LP V
Sbjct: 462 RVDSWQRESRHPSCHFVRTLGALNDMRAETDAVLVKAGIEWHPFSESAMAELPRVADPSH 521
Query: 266 WEVPQEELLSRKDLRNF--CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
W VP E R+DLR+ I +IDP TD+DDALS+ L G +GVHIADVS+F
Sbjct: 522 WSVPDAEAAVRRDLRSADQLICSIDPPGCTDVDDALSVRELPSGDLEIGVHIADVSHF-- 579
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G LD EA R T+VY++ R++ MLP LLSE++ SL G DRLA S+ W L+ D
Sbjct: 580 -GGFLDGEAAARCTTVYLVDRRLDMLPALLSEQLCSLRSGTDRLAVSVLWTLSPDLHDRD 638
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
W GRT+IRS +L Y+ AQDI+DG+ + + PQ + ++R++ +L
Sbjct: 639 VWFGRTIIRSRYQLEYQQAQDIMDGRPPRPEHDHIA---PQ-----DRPRLLRNLHTLAR 690
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
++ L+ R DGAL LE+++ F G P + + + + E M+ AN A
Sbjct: 691 IAAHLRAGRLQDGALELESAELRFETAAEGQPTEVMGKAEVPMMAVVAEMMIFANSAVAR 750
Query: 504 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 563
I +AFP S LLRRHP P +E EA C G LDTSS+ +SLE A D
Sbjct: 751 RIHQAFPSSTLLRRHPPPRQDAFKEVEALCEAGGCPLDTSSNAALSRSLEAA-VMASGDP 809
Query: 564 VLFDILINYATRPMQLASYFCSGDFK-DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
+ ++ + TR M A YF SGD + H+ LA YTHFTSP+RRY D+VVHR
Sbjct: 810 AIGSLIKSLVTRAMSEAEYFSSGDARPGGGGLSHFGLALQHYTHFTSPIRRYADVVVHRQ 869
Query: 623 LNAALEAEKL 632
L AAL + +
Sbjct: 870 LMAALNSPDM 879
>gi|222624135|gb|EEE58267.1| hypothetical protein OsJ_09271 [Oryza sativa Japonica Group]
Length = 919
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 220/695 (31%), Positives = 322/695 (46%), Gaps = 131/695 (18%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RP GRVV II+R+ W +Y GS + S V ++
Sbjct: 338 RPVGRVVGIIKRN--------------WNSY-CGSLEPMPMPAGSGGVAHALFVS---KD 379
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ PK+ + + L + + KR+ +VA +D W+ S +P H +
Sbjct: 380 RRIPKIRIQTRQLGNLLDKRI----------IVA--VDSWDVLSRYPSGHYV-------- 419
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 292
+L EN I FS + L+CLP +PW + E+L + R+DLR+ +F++DP
Sbjct: 420 -------VLIENDINTRPFSTQVLACLPPLPWTLSPEDLANPNRQDLRHVRVFSVDPPGC 472
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D+DDAL L +G VGVHIADV+ FV PGT LD EA R TSVY++ ++I MLP
Sbjct: 473 RDIDDALHCTPLPNGNFEVGVHIADVTNFVHPGTPLDEEASQRGTSVYLVGQRIDMLPKP 532
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
L+E+V SL V+RLAFS+ W++ D++ ++VI+SC +SY AQ +D V
Sbjct: 533 LTEDVCSLRADVERLAFSVIWEMTPHADIISTRYTKSVIKSCAAMSYVEAQARMDDSRLV 592
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
+ + +++L ++KI++ +R GAL L +++ F D E
Sbjct: 593 DP-------------------LTVDLRNLNSLAKIMRHRRCERGALTLASAEVKFEIDSE 633
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + + N + EEFML AN + AE I + FP +LLRRHP+P L
Sbjct: 634 THDPLDIGIYQIREANQMIEEFMLAANISVAEKILKHFPLCSLLRRHPSPTKEMLEPLLR 693
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
S GL LD SSS +SL+ A K+D F+ LI ATR M A YFCSGD
Sbjct: 694 TASSVGLNLDVSSSKALAESLDNA----KNDDPYFNKLIRILATRCMTQAVYFCSGDLT- 748
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVR 650
+++ HY LA +YTHFTSP+RRY D++VHR L AALE K
Sbjct: 749 FSEYYHYGLAASLYTHFTSPIRRYADVIVHRLLAAALEIAK------------------- 789
Query: 651 GRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACV 710
L +F D L VA + N R + A V
Sbjct: 790 ---LPPLFQDGPQ------------------------LTGVADNLNYRHRNAQMASRASV 822
Query: 711 KLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTL 770
+L+ I + + + +EAR++ + +++ K IE IY +W+
Sbjct: 823 ELHTLIYFRTRR-MDTEARIVKIKANGFIVFVPKFGIEGPIYLTPKGDKGGDWVVDE--- 878
Query: 771 VLSLCAHKRSFKRGGPGNYRALEEVAL---VVRPN 802
H+R K G +Y L+ V + VV P
Sbjct: 879 -----VHQRVTKPGTNVSYAVLQTVMIHMEVVEPQ 908
>gi|218192016|gb|EEC74443.1| hypothetical protein OsI_09834 [Oryza sativa Indica Group]
Length = 919
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 220/695 (31%), Positives = 322/695 (46%), Gaps = 131/695 (18%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RP GRVV II+R+ W +Y GS + S V ++
Sbjct: 338 RPVGRVVGIIKRN--------------WNSY-CGSLEPMPMPAGSGGVAHALFVS---KD 379
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ PK+ + + L + + KR+ +VA +D W+ S +P H +
Sbjct: 380 RRIPKIRIQTRQLGNLLDKRI----------IVA--VDSWDVLSRYPSGHYV-------- 419
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 292
+L EN I FS + L+CLP +PW + E+L + R+DLR+ +F++DP
Sbjct: 420 -------VLIENDINTRPFSTQVLACLPPLPWTLSPEDLANPNRQDLRHVRVFSVDPPGC 472
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D+DDAL L +G VGVHIADV+ FV PGT LD EA R TSVY++ ++I MLP
Sbjct: 473 RDIDDALHCTPLPNGNFEVGVHIADVTNFVHPGTPLDEEASQRGTSVYLVGQRIDMLPKP 532
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
L+E+V SL V+RLAFS+ W++ D++ ++VI+SC +SY AQ +D V
Sbjct: 533 LTEDVCSLRADVERLAFSVIWEMTPHADIISTRYTKSVIKSCAAMSYVEAQARMDDSRLV 592
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
+ + +++L ++KI++ +R GAL L +++ F D E
Sbjct: 593 DP-------------------LTVDLRNLNSLAKIMRHRRCERGALTLASAEVKFEIDSE 633
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + + N + EEFML AN + AE I + FP +LLRRHP+P L
Sbjct: 634 THDPLDIGIYQIREANQMIEEFMLAANISVAEKILKHFPLCSLLRRHPSPTKEMLEPLLR 693
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
S GL LD SSS +SL+ A K+D F+ LI ATR M A YFCSGD
Sbjct: 694 TASSVGLNLDVSSSKALAESLDNA----KNDDPYFNKLIRILATRCMTQAVYFCSGDLT- 748
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVR 650
+++ HY LA +YTHFTSP+RRY D++VHR L AALE K
Sbjct: 749 FSEYYHYGLAASLYTHFTSPIRRYADVIVHRLLAAALEIAK------------------- 789
Query: 651 GRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACV 710
L +F D L VA + N R + A V
Sbjct: 790 ---LPPLFQDGPQ------------------------LTGVADNLNYRHRNAQMASRASV 822
Query: 711 KLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTL 770
+L+ I + + + +EAR++ + +++ K IE IY +W+
Sbjct: 823 ELHTLIYFRTRP-MDTEARIVKIKANGFIVFVPKFGIEGPIYLTPKGDKGGDWVVDE--- 878
Query: 771 VLSLCAHKRSFKRGGPGNYRALEEVAL---VVRPN 802
H+R K G +Y L+ V + VV P
Sbjct: 879 -----VHQRVTKPGTNVSYAVLQTVMIHMEVVEPQ 908
>gi|187608139|ref|NP_001120564.1| DIS3 mitotic control homolog [Xenopus (Silurana) tropicalis]
gi|171847251|gb|AAI61523.1| dis3 protein [Xenopus (Silurana) tropicalis]
Length = 951
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 181/545 (33%), Positives = 275/545 (50%), Gaps = 67/545 (12%)
Query: 95 NDGMNAIERLSAMISSY--PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRK 151
+D + ++E M+ + K+P+G+VV II+R+ W Y G S+
Sbjct: 313 SDDIESVEEKEKMLKTAVNSVKKPSGQVVGIIKRN--------------WRPYCGMLSKS 358
Query: 152 DAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAAR 210
K++ L TP + P++ R+E A T+E + +
Sbjct: 359 QIKESTRHL---------FTPAERRIPRI-------------RIETRQASTLEGQRIIVA 396
Query: 211 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 270
+D W S +P H + G G+ E + +L E+ + FS LS LP +PW +
Sbjct: 397 VDGWPRNSRYPNGHFVKSLGTAGDKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWTITP 456
Query: 271 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 330
E++ +R DLR+ + ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD
Sbjct: 457 EDMKNRIDLRHLYVCSVDPPGCTDIDDALHCRELENGTLEVGVHIADVSHFIRPGNALDQ 516
Query: 331 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 390
E+ R T+VY+ ++I M+P LLS + SL VDRLAFS W+++ ++++ ++V
Sbjct: 517 ESSNRGTTVYLCDKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEVDENANILNTKFTKSV 576
Query: 391 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 450
I S L+Y AQ ID P + + + +S++ L +++KILK
Sbjct: 577 INSKASLTYAEAQMRIDS--------------PNMNDE-----ITQSLRLLNKLAKILKK 617
Query: 451 KRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 509
+R +GAL L + + F D E P D ++ N + EEFMLLAN + A+ I F
Sbjct: 618 RRIDNGALTLSSPEVRFHMDSETHDPIDLQTKELKETNSMVEEFMLLANISVAQKIYDEF 677
Query: 510 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 569
+ ALLR+HP+P L + T S+ SL++A + + L
Sbjct: 678 SEYALLRKHPSPPPANYDILVKAAKSKNLDIKTDSAKALADSLDKAESP---GFPYMNTL 734
Query: 570 IN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
+ ATR M A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+
Sbjct: 735 LRILATRCMMQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRLLAVAVG 791
Query: 629 AEKLY 633
A+ Y
Sbjct: 792 ADSTY 796
>gi|357611416|gb|EHJ67473.1| hypothetical protein KGM_03529 [Danaus plexippus]
Length = 974
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 185/536 (34%), Positives = 275/536 (51%), Gaps = 66/536 (12%)
Query: 104 LSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP 163
L+ + S PTG+VV II R R+ + + + G +R
Sbjct: 325 LNTKVDSEDEITPTGKVVGIIRRKWRQ-----YCGILLPSKFPGATRH------------ 367
Query: 164 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 223
TP + P+ ++ + D I ++ A +D W S +P
Sbjct: 368 -----LFTPAEKRIPR-----------VRIETRQSDILISQRILVA-LDSWPRNSRYPLG 410
Query: 224 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFC 283
H + G G+ + + IL E+ + + FS L+CLP +++P+EE+ R DLR+ C
Sbjct: 411 HFVRSLGPIGDKDAENEVILLEHDVPHARFSEAVLACLPPDDFKIPEEEIKKRVDLRSIC 470
Query: 284 IFTIDPSTATDLDDALSIERLS----DGIS--RVGVHIADVSYFVLPGTALDIEAQVRST 337
I ++DP TD+DDAL L DG++ VGVHIADV+YFV P TALD EA RST
Sbjct: 471 ICSVDPPGCTDIDDALHARPLPGLSPDGLNTYEVGVHIADVTYFVRPNTALDREAAARST 530
Query: 338 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIR-SCCK 396
+VY++ R+I M+P LLS + SL G +RLAFS W ++ +V+ ++VI+ S
Sbjct: 531 TVYLVDRRIDMVPGLLSSNLCSLRGGEERLAFSCVWVVDENANVLSTKFHKSVIKMSSSA 590
Query: 397 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 456
++YE AQ ID + ++ S+++L ++K LK KR +G
Sbjct: 591 MTYEEAQIAIDDATRCD-------------------EIASSLRTLNSLAKKLKQKRLDNG 631
Query: 457 ALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 515
AL L + + F D E P + D N + EEFMLLAN + AE +A +P ALL
Sbjct: 632 ALLLASPEIRFQVDSETHDPIEVQAKKIMDTNSMVEEFMLLANVSVAERVAADYPRCALL 691
Query: 516 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YAT 574
RRHP+P + F + G +LD S++ F +SL +A + D F+ L+ AT
Sbjct: 692 RRHPSPQLHSFDTFLKAARQQGFELDVSTNKSFSKSLNEA---VIPDRPFFNTLLRIMAT 748
Query: 575 RPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
R MQ A YF SG + ++ HY LA P+YTHFTSP+RRY D++VHR L A++ A+
Sbjct: 749 RCMQQAVYFPSGT-RTQEEFYHYGLACPIYTHFTSPIRRYADVIVHRLLAASIGAD 803
>gi|407420272|gb|EKF38527.1| mitochondrial exoribonuclease DSS-1, putative [Trypanosoma cruzi
marinkellei]
Length = 893
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 216/630 (34%), Positives = 319/630 (50%), Gaps = 63/630 (10%)
Query: 103 RLSA-MISSYPTKRPTGRVVSIIER-SPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSL 160
R+SA + + K+P+G VV+I+ER SP +V L +D + +
Sbjct: 157 RMSAPTVHDWGNKKPSGVVVAILERRSPL--FVVARL-------------RDDALAPNEI 201
Query: 161 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE--WNEES 218
DR Y Q P P + V +D+P + L++ + LV E W
Sbjct: 202 VKSDR-YYQFKCFDPLMPNIAVFGRDIPVPLHATLDKN--FFFLRLVTRGDGEFFWTAWR 258
Query: 219 PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELL---S 275
F ++ V G V A+ I FS E+ +C+P +EVP +++L
Sbjct: 259 -FLTGKIVRVLGGVDSVRANSFALCNAFEISMDDFSEEAYACVP-EEFEVPDKQVLLQMG 316
Query: 276 RKDLRNF-CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 334
R+DLR + +IDP+TA DLDDALSI G RVGVHIADVSYFV G+ LD EA+
Sbjct: 317 RRDLREEEFVCSIDPATARDLDDALSITSTPGGY-RVGVHIADVSYFVPTGSPLDEEARE 375
Query: 335 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 394
RSTSVY++++ IPMLP LSE+ SLNPG D+ AFS + L+ G+V W G++VIR+
Sbjct: 376 RSTSVYLVEQVIPMLPRKLSEDYCSLNPGSDKFAFSCIFHLDHHGNVKSEWFGQSVIRNR 435
Query: 395 CKLSYEHAQDIIDGKFDVESSNTLGE--GWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 452
C+L+YE AQ I+DG V + G+ L+ + E SI++L+E++ +++
Sbjct: 436 CRLTYEEAQRILDGDKTVFDTLDFGDEKDVRHLHVRTE-----ASIRTLFELASKMRNAS 490
Query: 453 FTDGALRLENSKPVFLFDEYGT---PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 509
+ G L + N K +LF++ PY +S + + N+L EEFMLLAN AE I +
Sbjct: 491 LSRGRLTIGNMKVRYLFEDIDNPTFPYGFEISRQIEANWLVEEFMLLANARVAEKIVQYM 550
Query: 510 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 569
PD ALLRRH P+ +KL S L+L SS L+ A K D Y +
Sbjct: 551 PDQALLRRHEPPDRKKLLTLREAVSSVALELRGGSSKSLQVFLDNA--KNSDFYDELCVA 608
Query: 570 INYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
+ Y+ ++ A YF +G + + GHYALA P YTHFTSP+RRY D++ HR L ALE
Sbjct: 609 LKYS---LKQAVYFVNGCEETEAYRGHYALALPWYTHFTSPIRRYSDIIAHRQLLCALEI 665
Query: 630 EKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILV 689
E + + + PK G + ++ KY P +++
Sbjct: 666 ESIV-QESKGGPKERRHPVSPGSI-----------------DVNQLSTRKYFYPVSEV-E 706
Query: 690 NVATHCNDRKLACRNVKDACVKLYMWILLK 719
++ + N +KL R V DA + ++ L+
Sbjct: 707 SIVENANVKKLKARQVSDASLGIFFCYYLR 736
>gi|6063541|dbj|BAA85401.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 908
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 271/522 (51%), Gaps = 73/522 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RP GRVV II+R+ W +Y GS + S V ++
Sbjct: 338 RPVGRVVGIIKRN--------------WNSY-CGSLEPMPMPAGSGGVAHALFVS---KD 379
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ PK+ + + L + + KR+ +VA +D W+ S +P H +
Sbjct: 380 RRIPKIRIQTRQLGNLLDKRI----------IVA--VDSWDVLSRYPSGHYV-------- 419
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 292
+L EN I FS + L+CLP +PW + E+L + R+DLR+ +F++DP
Sbjct: 420 -------VLIENDINTRPFSTQVLACLPPLPWTLSPEDLANPNRQDLRHVRVFSVDPPGC 472
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D+DDAL L +G VGVHIADV+ FV PGT LD EA R TSVY++ ++I MLP
Sbjct: 473 RDIDDALHCTPLPNGNFEVGVHIADVTNFVHPGTPLDEEASQRGTSVYLVGQRIDMLPKP 532
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
L+E+V SL V+RLAFS+ W++ D++ ++VI+SC +SY AQ +D V
Sbjct: 533 LTEDVCSLRADVERLAFSVIWEMTPHADIISTRYTKSVIKSCAAMSYVEAQARMDDSRLV 592
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
+ + +++L ++KI++ +R GAL L +++ F D E
Sbjct: 593 DP-------------------LTVDLRNLNSLAKIMRHRRCERGALTLASAEVKFEIDSE 633
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + + N + EEFML AN + AE I + FP +LLRRHP+P L
Sbjct: 634 THDPLDIGIYQIREANQMIEEFMLAANISVAEKILKHFPLCSLLRRHPSPTKEMLEPLLR 693
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
S GL LD SSS +SL+ A K+D F+ LI ATR M A YFCSGD
Sbjct: 694 TASSVGLNLDVSSSKALAESLDNA----KNDDPYFNKLIRILATRCMTQAVYFCSGDLT- 748
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
+++ HY LA +YTHFTSP+RRY D++VHR L AALE KL
Sbjct: 749 FSEYYHYGLAASLYTHFTSPIRRYADVIVHRLLAAALEIAKL 790
>gi|452820942|gb|EME27978.1| exoribonuclease R [Galdieria sulphuraria]
Length = 1013
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 160/427 (37%), Positives = 237/427 (55%), Gaps = 24/427 (5%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
+ ID W S FP HV+ G G++E + +L+EN+I F L CLP
Sbjct: 474 IVVSIDSWERNSMFPSGHVIEELGVEGDIETETKVLLHENSIITRAFPKAVLECLPADDL 533
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+ + L +RKDL++ CIF+IDP TD+DDALSI+ + VGVHIADV+ F+ T
Sbjct: 534 QFSPDMLKNRKDLQSLCIFSIDPPGCTDIDDALSIQLDENHNYMVGVHIADVTSFISRDT 593
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
ALD EA RST+VY+ R+I MLP LS ++ SL RLAFS F ++ G+V+
Sbjct: 594 ALDKEAADRSTTVYLADRRIEMLPPRLSSDLCSLKENETRLAFSAFITIDHEGNVLHYDF 653
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
RT+IRS +Y AQD ++ E+ E +++ S+ L ++++
Sbjct: 654 ARTIIRSRKAFTYAEAQDYLNQARKKETK--------------ECTEIELSLLRLMDIAQ 699
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSV-LSGREDLNFLFEEFMLLANKTAAEVI 505
L+ +RF +GALRL + + F D+ G +V + + N L EE+MLL N A+ I
Sbjct: 700 KLRKRRFENGALRLSSPEVRFETDQEGDEITNVSVYETHETNELVEEYMLLTNVVVAQRI 759
Query: 506 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD--- 562
+++FP ALLRRHP PN + +++D SS+ Q +SLE+ +EK ++
Sbjct: 760 SKSFPSCALLRRHPIPNKEMFEPLLKIAAALSVEIDVSSNKQLSRSLEKIQEKFDEENDP 819
Query: 563 --YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
LF I TR M A YF +G+ + ++ HY LA +YTHFTSP+RRY D++VH
Sbjct: 820 FKATLFRI---STTRCMTQALYFSAGEASQE-EYFHYGLASTIYTHFTSPIRRYADIIVH 875
Query: 621 RTLNAAL 627
R L+ ++
Sbjct: 876 RMLSGSI 882
>gi|156382055|ref|XP_001632370.1| predicted protein [Nematostella vectensis]
gi|156219425|gb|EDO40307.1| predicted protein [Nematostella vectensis]
Length = 1048
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 186/567 (32%), Positives = 278/567 (49%), Gaps = 69/567 (12%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP----CVP 265
RID W +S +P H + G G++E ++ ++ E+ + F+ L LP P
Sbjct: 395 RIDSWEVDSMYPSGHFVRALGLIGDLETEVATLMVEHTLSAPPFTDGQLKELPSDSPTEP 454
Query: 266 WEVPQEELLSRKDLR-NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
W + +EE+ R+DLR + +F+IDP D+DD LSI +L DG +GVHIADV++FV P
Sbjct: 455 WVISEEEVCRRRDLRKSHLVFSIDPKGCEDVDDTLSIRQLKDGRLELGVHIADVTHFVHP 514
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
G+ D EA+ RSTSVY+ R+ MLP +LS + SL GVDRLA S+ W L S DV+
Sbjct: 515 GSLTDAEARSRSTSVYLADRRYDMLPEILSANLCSLISGVDRLAMSVMWVLGSNYDVIKT 574
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYG------QFEWSDVVRSI 438
W GRT+IRS KL YE AQ I DG V + L + P+L G D+ S+
Sbjct: 575 WYGRTIIRSSYKLFYEVAQAIADG---VVPNEDLLKEIPELQGLDSSAANKGIQDIRWSV 631
Query: 439 KSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLAN 498
L ++++ K +R T GA+ L+N + L +E D + +++ EE M+LAN
Sbjct: 632 LKLMDIARYYKARRQTQGAVELDNPEVKVLLNEKKDILDLIDKQGLEIHETIEECMILAN 691
Query: 499 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
A+ + + FP +LLRRHP P + G + TSS+ +SL++ +
Sbjct: 692 HWVAKRLVQTFPTCSLLRRHPLPRQQYFENLMQCAKAKGFTIKTSSNKLLAESLDKCED- 750
Query: 559 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
DD +L A + M A YF +G D ++ HY LA YTHFTSP+RRY D++
Sbjct: 751 -PDDPTFNKLLRILAVQAMSSALYFSTGSVSVD-EFVHYGLALDRYTHFTSPIRRYADVI 808
Query: 619 VHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAAL 678
VHR L AAL ++ D ++ L E
Sbjct: 809 VHRLLMAALGSD-------------------------------DQSQVLNNEE------- 830
Query: 679 KYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILL----KKKEVLLSEARVLALG 734
L +A H ND K + V+L+ + + E LL++A ++ L
Sbjct: 831 ---------LEELAQHMND-KHKVGHTAAGSVELFQTLFFNSMSEDDERLLADAVIVGLR 880
Query: 735 PRFMTIYIEKLAIERRIYYDEVEGLIV 761
+ +YI + + +Y + GL+V
Sbjct: 881 ANGLLVYIPRYCFKSAVYLKDKNGLVV 907
>gi|149641996|ref|XP_001514554.1| PREDICTED: exosome complex exonuclease RRP44 [Ornithorhynchus
anatinus]
Length = 966
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 184/525 (35%), Positives = 267/525 (50%), Gaps = 69/525 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RP+GRVV II+R+ R G L S+ K+ R L TP
Sbjct: 348 RPSGRVVGIIKRNWR--PFCGML-----------SKSLIKEARRHL---------FTPAD 385
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ P++ R+E A T++ + + ID W S +P H + G G
Sbjct: 386 RRIPRI-------------RIETRQASTLDGQRIIVAIDGWPRNSRYPNGHFVKNLGTVG 432
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ E + +L E+ + FS LS LP +PW + ++++ +R+DLR+ C+ ++DP T
Sbjct: 433 DKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCVCSVDPPGCT 492
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P LL
Sbjct: 493 DIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESAKRGTTVYLCEKRIDMVPELL 552
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL VDRLAFS W++N +++ ++ I S L+Y AQ ID
Sbjct: 553 SSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSAINSKASLTYAEAQMRID------ 606
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
S ++ + D+ S++ L +++KILK +R GAL L + + F D E
Sbjct: 607 -SVSMRD------------DITTSLRGLNKLAKILKKQRIDKGALTLSSPEVRFHMDSET 653
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P D ++ N + EEFMLLAN + AE I F + ALLR+HPAP
Sbjct: 654 HDPIDLQTKELKETNSMVEEFMLLANISVAEKIYEEFSEHALLRKHPAPPPSNYEILVKA 713
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLF----DILINYATRPMQLASYFCSGDF 588
L + T ++ +SL+ A +Y F +L ATR M A YFCSG
Sbjct: 714 AKSKDLDIKTDTAKALAESLDGA------EYPTFPYLNTLLRILATRCMMQAVYFCSG-- 765
Query: 589 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D D+ HY LA P+YTHFTSP+RRY DL+VH AA+ A+ Y
Sbjct: 766 -MDNDFHHYGLASPIYTHFTSPIRRYVDLIVHWISVAAIGADSTY 809
>gi|307184419|gb|EFN70828.1| DIS3-like exonuclease 2 [Camponotus floridanus]
Length = 598
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/439 (36%), Positives = 245/439 (55%), Gaps = 29/439 (6%)
Query: 211 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 270
ID W E + +L V G+ GE+E ++ AI+ E+ + + E L LP + +
Sbjct: 38 IDSW--EQIYASGRILSVVGKVGEIEAELQAIILEHNLDVLPYREELLEELPGSDYILTD 95
Query: 271 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 330
+++ R+D R+ C+FTIDP+TA DLDDA+S + L +G VGVHI+DV++++ + LD+
Sbjct: 96 DDMKDREDWRHECVFTIDPATAIDLDDAISCKVLDNGNYEVGVHISDVTHYLKFSSPLDM 155
Query: 331 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 390
E R+TS+Y+ MLP L ++ SL+ G DRLAFS+ W++ S ++V +T+
Sbjct: 156 EVSKRATSIYLPHTTYHMLPEKLC-QICSLSAGKDRLAFSVIWEMTSDAEIVKHHFAKTI 214
Query: 391 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 450
IRSCC+LSY+ AQ +I+ + N+L + G + S + + +L+++S L++
Sbjct: 215 IRSCCQLSYDMAQAMIENPEKTQFQNSLN-----IKGNYTVSSLSNVVNNLFKLSNQLRN 269
Query: 451 KRFTDGALRLENSKPVFLFD-----EYG--TPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
KRF +GALRL+ K D E G P + L R+D N L EEFMLLAN T A
Sbjct: 270 KRFDNGALRLDQPKLQICTDTTLSQEQGIPIPVNYHLEERKDSNSLVEEFMLLANVTVAT 329
Query: 504 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 563
+ A P+ ALLR H P+ L K+G+ L+ G+ +SL+ + +Y
Sbjct: 330 KLYTAIPEMALLRIHKDPSKYSLNTVCDTLRKYGIHLN----GETAKSLQASIRHYDPEY 385
Query: 564 ----------VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
+ ++IN ++ M A Y CS D HYAL P+YTHFTSP+RR
Sbjct: 386 NAISVNNSMKYIMTVIINLCSKTMMRAEYICSSTISSLQDLRHYALNVPLYTHFTSPIRR 445
Query: 614 YPDLVVHRTLNAALEAEKL 632
Y D VVHR L+AA+E + L
Sbjct: 446 YSDCVVHRLLHAAIENKSL 464
>gi|449471783|ref|XP_002198134.2| PREDICTED: DIS3-like exonuclease 1 [Taeniopygia guttata]
Length = 971
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 184/521 (35%), Positives = 276/521 (52%), Gaps = 46/521 (8%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTG+VV II+++ RD +V F K S + + + +TP
Sbjct: 247 PTGKVVGIIQKN-WRDYVVTF----------------PSKEESQSQGRNAQKVLVTPWDY 289
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A E +V RID W S +P H + V GR G++
Sbjct: 290 RIPK-----------IRISTQQAEALQEYRVVV-RIDSWESTSLYPNGHFVRVLGRIGDL 337
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 290
E +I AIL EN+IC + FS +S +P PW+V EE R DLR+ IF+IDP
Sbjct: 338 EGEIAAILVENSICAAPFSEIQMSEMPASSPKNPWKVSPEEEKKRLDLRDTHLIFSIDPK 397
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDALS+ L +G +GVHIADV++FV + D+EA+ R+T+ Y+ R+ MLP
Sbjct: 398 GCEDVDDALSVRTLPNGNLELGVHIADVTHFVAANSYTDVEARARATTYYLADRRYDMLP 457
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L +++ RT+IRS KL YE AQ ++DG
Sbjct: 458 SVLSADLCSLLSGVDRYAVSVLWELEKESYEMLSVQYTRTLIRSAYKLEYETAQGLLDGD 517
Query: 410 F----DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
D+ +L EG Q + +++V ++ L ++++ ++ +R GAL LE +
Sbjct: 518 TSVVGDILELKSLDEG----TRQKKLAELVWAVSKLTDIARHVRAERDRCGALELEGIEI 573
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
D+ +D + +++ E M+LAN A+ IA AFP ALLR+HP P
Sbjct: 574 RVQLDDKRNIHDLIPKQPLEVHETVAECMILANHWVAKRIAEAFPHQALLRQHPPPRQEF 633
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
E S G +DT S+ +SL++A + D ++ +L + AT M A YF +
Sbjct: 634 FTELRDCASAKGFSIDTRSNKALAESLDRAND--PSDPIVNKLLRSMATHAMSNALYFST 691
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 626
G ++ + HY LA YTHFTSP+RRY D+VVHR L AA
Sbjct: 692 GSCPEE-QFHHYGLALEKYTHFTSPIRRYADIVVHRLLLAA 731
>gi|307197887|gb|EFN78986.1| DIS3-like exonuclease 2 [Harpegnathos saltator]
Length = 996
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 278/541 (51%), Gaps = 47/541 (8%)
Query: 122 SIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR---------------- 165
SII+R+ DG + +N N++ + +K + + + D+
Sbjct: 331 SIIDRNRAFDGDLVVARINPEENWQILANGKIQKTGTVICILDKLHPRKAIGYLTQHVRK 390
Query: 166 --EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 223
Y+ + P + P + + K +P+ K+ + I + + I+ W + S
Sbjct: 391 CKPYVLIKPKDIRIPLIRIPSKSMPNLYHKQPNLYNNVIFLIV----INHWTQPS-HASG 445
Query: 224 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFC 283
+L + G G++ ++ AIL EN + S + E L LP + + +++ R+D N C
Sbjct: 446 EILQIVGESGDLNAEVTAILLENNLDVSPYRQELLQGLPDSDYVLTNADIMGREDWSNEC 505
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
+FTIDP+TA DLDDA+S + L +G VGVHI+DV++++ + LD R+T+VY+
Sbjct: 506 VFTIDPATAVDLDDAVSCKVLKNGNYEVGVHISDVTHYLELFSPLDKAISKRATTVYLPH 565
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
MLP L V SL PG D+LAFS+ W+L G++V++ +TVIRSCC+LSY+ AQ
Sbjct: 566 TSYHMLPEQLC-RVCSLLPGKDKLAFSVIWELTPDGEIVEQRFAKTVIRSCCQLSYDLAQ 624
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+ID +V S L + G F + ++ +L+++S L++KRF++GAL L+
Sbjct: 625 IMIDNPEEVLSDKVLD-----IKGNFTALSLSNTVNNLFKLSTSLRNKRFSNGALSLDQP 679
Query: 464 KPVFLFD-----EYG--TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 516
K D E+G P + L R D N L EEFMLLAN T A + P++ALLR
Sbjct: 680 KIHICMDPKIMREHGISVPVNYQLEERRDSNRLIEEFMLLANMTVAAQLYSTIPETALLR 739
Query: 517 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD----------DYVLF 566
H P L K+G+ LD ++G + S+++ L + +V+
Sbjct: 740 IHRDPIKHSLVTIHETLRKYGIHLDIETAGALNASIQRYERDLLECNSSTMNNTMQHVIM 799
Query: 567 DILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 626
++ N ++ M A Y C+ D HYAL P+YTHFTSP+RRY D +VHR L A
Sbjct: 800 -VITNLCSKAMTRAEYKCASAVTSSDDLKHYALNVPLYTHFTSPIRRYSDCIVHRLLYAT 858
Query: 627 L 627
+
Sbjct: 859 I 859
>gi|255531532|ref|YP_003091904.1| ribonuclease R [Pedobacter heparinus DSM 2366]
gi|255344516|gb|ACU03842.1| ribonuclease R [Pedobacter heparinus DSM 2366]
Length = 709
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 162/429 (37%), Positives = 228/429 (53%), Gaps = 34/429 (7%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V I EW E P ++++ G GE ++NAIL + S F E +P
Sbjct: 187 VQVSITEWPEGVKNPIGKIINILGEQGENNTEMNAILAQYGFPLS-FPAEVELEANAIPE 245
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+V E+ RKD RN FTIDP+ A D DDA+S + L +G +GVHIADVS++V P +
Sbjct: 246 QVSAAEIKGRKDFRNTTTFTIDPADAKDFDDAISFKTLENGNYEIGVHIADVSHYVKPNS 305
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
+LD EA R+TSVY++ R IPMLP LS V SL P D+L F+ ++L+ ++V+ W
Sbjct: 306 SLDKEAYARATSVYLVDRVIPMLPERLSNGVCSLRPNEDKLCFAAVFELDEKANLVNEWF 365
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
GRTVI S + SYE AQ++I+ K D I L E++
Sbjct: 366 GRTVIHSDRRFSYEEAQEVIENK---------------------AGDYAAEILKLNELAY 404
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
IL+DK+F +GA+ E+++ F DE G P + R+D + L E+FMLLANK AE IA
Sbjct: 405 ILRDKKFKNGAISFESTEVKFKLDETGKPIGVYVKERKDAHKLIEDFMLLANKKVAEFIA 464
Query: 507 RAFPD----SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
+ + + R H +PN+ L F F ++ G +++ S + +SL E ++
Sbjct: 465 KKGKGKQKYTFVYRSHDSPNLENLGNFALFAARFGYKINMKSDKEIAKSLNYLMEDVEGK 524
Query: 563 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
++L A R M A Y HY LAF YTHFTSP+RRYPD++VHR
Sbjct: 525 KEQ-NVLTQLAIRSMAKAIYTTK-------KTSHYGLAFDHYTHFTSPIRRYPDVMVHRL 576
Query: 623 LNAALEAEK 631
L A L EK
Sbjct: 577 LAAYLNNEK 585
>gi|195450236|ref|XP_002072425.1| GK22331 [Drosophila willistoni]
gi|194168510|gb|EDW83411.1| GK22331 [Drosophila willistoni]
Length = 981
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 177/522 (33%), Positives = 262/522 (50%), Gaps = 59/522 (11%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
+ PTGR+V I+ R +W Y G + + D P
Sbjct: 346 RTPTGRIVGIVRR--------------KWRQYCGILQPSL--------IEDTNRHIFVPA 383
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
K P++ + + + +R + ID W S +P H + G G
Sbjct: 384 DRKIPRIRIETRQAAKLLNQR------------IIVTIDTWPRNSRYPHGHFVRSLGPLG 431
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
++ + IL E+ + FS E LS LP +PW + E+ R DLR+ I ++DP T
Sbjct: 432 DMATENEVILLEHDVPHCKFSEEVLSFLPQMPWTITPEDYAKRVDLRDLYICSVDPPGCT 491
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+VY++ ++I M+P LL
Sbjct: 492 DIDDALHCRDLPNGNLEVGVHIADVSHFIRPGNALDKEAAARGTTVYLVGKRIDMVPELL 551
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL GV+R AFS W+++ +V+++ ++VI+S ++YE AQ +ID
Sbjct: 552 SSNLCSLVGGVERFAFSCIWEVDQEANVLNKRFHKSVIKSKRAMTYEEAQVMID------ 605
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
SN GE + +S+++L ++KILK +R +GAL L + + F D E
Sbjct: 606 DSNEQGE-------------IAKSLRNLNRLAKILKKRRMDNGALVLASPEIRFQVDSET 652
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P + D N + EEFMLLAN T A+ IA F + A+LRRHP P
Sbjct: 653 HEPLEVEAKQMRDTNSMVEEFMLLANITVAQHIAAEFSECAVLRRHPRPPPTNFDPLVKA 712
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 591
G ++D S SL++ +K D F+ +I TR M A YF SG + +
Sbjct: 713 ARYQGFEVDIESGLSLSHSLDKC---VKVDNPYFNTMIRILTTRCMMQAVYFISGSLQKE 769
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
++ HY LA +YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 770 -EFFHYGLAASIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 810
>gi|323453416|gb|EGB09288.1| hypothetical protein AURANDRAFT_25192 [Aureococcus anophagefferens]
Length = 966
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 205/645 (31%), Positives = 303/645 (46%), Gaps = 96/645 (14%)
Query: 112 PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLT 171
P G VV +++R PR+ + G L+ + D R+ + +
Sbjct: 329 PASEVAGHVVGVLKREPRQ--LCGSLD---------EATGDVHATRA-------QSVLFV 370
Query: 172 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
P ++PK+ V + L RL M +V A +D W ++ +P+ H + G+
Sbjct: 371 PVDRRFPKVRVETRQL-----ARLAG------MRVVVA-VDAWADDERYPRGHYVSTLGK 418
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEELLSRKDLRNFCIFTIDP 289
G+ + IL E + + FS L+CLP + + QEE+ R DLR + +IDP
Sbjct: 419 RGDKAVETALILQELEVATAPFSTAVLACLPPEGEAFVITQEEVARRMDLRALDVCSIDP 478
Query: 290 STATDLDDAL-SIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
D+DDAL + L++G +VGVHIADV++FV G+ LD+EA R TS Y++ R++ M
Sbjct: 479 PGCRDIDDALHCVGPLANGNYQVGVHIADVTHFVASGSPLDLEAAKRGTSTYLVDRRLDM 538
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP+LL+ + SL GV+RLAFS +L AGDVV +TVI+S L+Y AQ ID
Sbjct: 539 LPILLTANLCSLRGGVERLAFSALMELTPAGDVVAAEFAKTVIKSRAALTYHQAQVFID- 597
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 468
D + ++ G V S++ L ++ + L+ KR GAL L + + F+
Sbjct: 598 --DADGAHDSGP-------------VAASVRRLAKLGRALRAKRMAAGALTLASPEVKFM 642
Query: 469 F-DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
+E +P D + N EEFMLLAN A+ + + +P +LR HPAP +
Sbjct: 643 LSNESDSPTDVGAYQLVEANSTVEEFMLLANVEVAKFLLKKYPALTILRHHPAPPPERFE 702
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 587
+A + HG LD ++S SL+ A + DD + TR M A YFCS D
Sbjct: 703 RLQAMLAAHGFDLDVATSKTLADSLDAAAK--PDDAYFNQLARILTTRCMAPAKYFCSND 760
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHRE 647
KD D+ HY LA VYTHFTSP+RRY D+V HR L AA+ LP R
Sbjct: 761 -KDAPDYVHYGLAAAVYTHFTSPIRRYADVVAHRLLAAAVGFSP--------LPPALGR- 810
Query: 648 GVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKD 707
DA L A + N+ + ++A R
Sbjct: 811 -------------GDAKPEL-----------------ARVCANLNRRNKNAQVASRE--- 837
Query: 708 ACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
+ LY + K K ARVL+L PR + + + + IE +Y
Sbjct: 838 -SIALYTRLFFKDKPQAKVAARVLSLSPRKIDVLVPRYGIEATLY 881
>gi|307199462|gb|EFN80075.1| Exosome complex exonuclease RRP44 [Harpegnathos saltator]
Length = 977
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 196/608 (32%), Positives = 303/608 (49%), Gaps = 88/608 (14%)
Query: 102 ERLSAMISSYPTKR--PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 159
E+ A S+ TK PTG++V II R +W Y G + A K
Sbjct: 318 EKTFAKYSASKTKERIPTGKIVGIIRR--------------KWRQYCGILQPSAIK---- 359
Query: 160 LSVPDREYIQ--LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI-EMELVAARIDEWNE 216
E ++ P K PK+ R+E A I + + +D W
Sbjct: 360 ------ESVRHLFVPAERKIPKI-------------RIETRQAEILSKQRIIVALDSWPR 400
Query: 217 ESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSR 276
S +P H + G G+ E + +L E+ + S FS LS LP +PW + + ++ R
Sbjct: 401 HSRYPLGHFVRALGNIGDKETENEVLLLEHDVPHSRFSDAVLSFLPKLPWIITEADIAQR 460
Query: 277 KDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRS 336
+DLR+ I ++DP TD+DDAL ++L +G VGVHIADVS+F+ PGTALD EA +R+
Sbjct: 461 EDLRHLDICSVDPPGCTDIDDALHCKKLPNGNYNVGVHIADVSHFIRPGTALDKEAALRA 520
Query: 337 TSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCK 396
T+VY++ ++I M+P LLS + SL +R AFS W++N +++ +++IRS
Sbjct: 521 TTVYLVDKRIDMVPELLSSNLCSLRGNEERFAFSCIWEINPHANIISTRFCKSIIRSRQA 580
Query: 397 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 456
++YE AQ ID ++ + S++ L +++K K +R +G
Sbjct: 581 MTYEEAQLKIDDATQHDA-------------------ITVSLRGLNKLAKKFKKRRIQNG 621
Query: 457 ALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 515
AL L + + F D E P D + + N + EEFMLLAN + AE I FP+ A+L
Sbjct: 622 ALILASPEIRFQVDSETHDPIDVEVKKLRETNSMVEEFMLLANISVAEKILAEFPECAML 681
Query: 516 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YAT 574
RRHP P L G ++ ++ + QSL++A+ K+ + Y F+ ++ AT
Sbjct: 682 RRHPTPPQNNLEPLIKAARNQGFTINVNTGKELAQSLDEAK-KVSNPY--FNTMLRILAT 738
Query: 575 RPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR-YPDLVVHRTLNAALEAEKLY 633
R M A YF SG + + ++ HY LA P+YTHFTSP+RR Y D++VHR L+ + A+ Y
Sbjct: 739 RCMMQAVYFISGMHQSE-EYSHYGLACPIYTHFTSPIRRQYADIIVHRLLSVCIGADATY 797
Query: 634 -----WKHRRMLPKN-NHREGVRG-------RFLTGIFYDKDAAESLEG------REALS 674
K +L +N N+R + T +F+ +D + EG + AL
Sbjct: 798 PELLDKKKNNLLCQNLNYRNRMAQYASRASVALHTHLFF-RDKVQDEEGYILFVRKNALQ 856
Query: 675 VAALKYGV 682
V KYG+
Sbjct: 857 VLIPKYGI 864
>gi|166201907|sp|Q0P4R5.2|DI3L1_XENTR RecName: Full=DIS3-like exonuclease 1
Length = 1039
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 188/518 (36%), Positives = 273/518 (52%), Gaps = 41/518 (7%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++R+ RD + F + +G K+A++ + + P
Sbjct: 324 PTGRVVGILQRN-WRDYVATF-PAKEDIETQG---KNAQR------------VLVMPWDY 366
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G +
Sbjct: 367 RIPK-----------IRISTQQAEALQDYRVVV-RIDSWESTSLYPNGHFVRVLGRTGNL 414
Query: 236 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I + FS L+ +P PW+V EE R DLR +F+IDP
Sbjct: 415 EAEIATILVENSISVNPFSEAQLAEMPSNTPESPWQVKPEEG-DRLDLRKTHLVFSIDPK 473
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDALSI +L G +GVHIADV++FV P T DIEA+ R+T+ Y+ R+ MLP
Sbjct: 474 GCEDVDDALSIRKLPSGHLELGVHIADVTHFVPPNTYTDIEARSRATTYYLADRRYDMLP 533
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDIIDGK 409
++LS ++ SL GVDR A S+ W+++S+ + R W GRT+IRS KLSYE AQ ++DG
Sbjct: 534 LILSADLCSLLGGVDRYAVSVIWEMDSSTYEIRRVWYGRTIIRSSYKLSYEVAQQLMDG- 592
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
D+E NT E P ++ ++ L EV+ + +R GAL LE +
Sbjct: 593 -DLEPLNTEMELHPLKQDPVRLEQLLWAVGKLTEVAHATRMRRDMSGALELEGVEVRVQL 651
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
E + D V ++ E M+LAN A+ I +P ALLR HP +E
Sbjct: 652 GEKHSIDDLVPKQPLQMHETIAECMILANHWVAKKIWECYPQHALLRLHPPARQEFFQEL 711
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
+ G +DT S+ SL+QA + D ++ +L AT+ M A YF +G +
Sbjct: 712 KECAKARGFSIDTRSNKALADSLDQAND--PSDPLVNQLLRMMATQAMSNARYFSTGSYT 769
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
+D ++ HY LA YTHFTSP+RRY D+VVHR L AA+
Sbjct: 770 ED-EFYHYGLALEKYTHFTSPIRRYADIVVHRLLLAAV 806
>gi|118403694|ref|NP_001072835.1| DIS3-like exonuclease 1 [Xenopus (Silurana) tropicalis]
gi|112418522|gb|AAI21936.1| DIS3-like exonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 961
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 188/518 (36%), Positives = 273/518 (52%), Gaps = 41/518 (7%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++R+ RD + F + +G K+A++ + + P
Sbjct: 246 PTGRVVGILQRN-WRDYVATF-PAKEDIETQG---KNAQR------------VLVMPWDY 288
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G +
Sbjct: 289 RIPK-----------IRISTQQAEALQDYRVVV-RIDSWESTSLYPNGHFVRVLGRTGNL 336
Query: 236 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I + FS L+ +P PW+V EE R DLR +F+IDP
Sbjct: 337 EAEIATILVENSISVNPFSEAQLAEMPSNTPESPWQVKPEEG-DRLDLRKTHLVFSIDPK 395
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDALSI +L G +GVHIADV++FV P T DIEA+ R+T+ Y+ R+ MLP
Sbjct: 396 GCEDVDDALSIRKLPSGHLELGVHIADVTHFVPPNTYTDIEARSRATTYYLADRRYDMLP 455
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDIIDGK 409
++LS ++ SL GVDR A S+ W+++S+ + R W GRT+IRS KLSYE AQ ++DG
Sbjct: 456 LILSADLCSLLGGVDRYAVSVIWEMDSSTYEIRRVWYGRTIIRSSYKLSYEVAQQLMDG- 514
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
D+E NT E P ++ ++ L EV+ + +R GAL LE +
Sbjct: 515 -DLEPLNTEMELHPLKQDPVRLEQLLWAVGKLTEVAHATRMRRDMSGALELEGVEVRVQL 573
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
E + D V ++ E M+LAN A+ I +P ALLR HP +E
Sbjct: 574 GEKHSIDDLVPKQPLQMHETIAECMILANHWVAKKIWECYPQHALLRLHPPARQEFFQEL 633
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
+ G +DT S+ SL+QA + D ++ +L AT+ M A YF +G +
Sbjct: 634 KECAKARGFSIDTRSNKALADSLDQAND--PSDPLVNQLLRMMATQAMSNARYFSTGSYT 691
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
+D ++ HY LA YTHFTSP+RRY D+VVHR L AA+
Sbjct: 692 ED-EFYHYGLALEKYTHFTSPIRRYADIVVHRLLLAAV 728
>gi|195125019|ref|XP_002006980.1| GI12678 [Drosophila mojavensis]
gi|193918589|gb|EDW17456.1| GI12678 [Drosophila mojavensis]
Length = 1220
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 234/420 (55%), Gaps = 32/420 (7%)
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE-------------VP 269
A ++ GR G+++ ++ AIL+ N S VP+E V
Sbjct: 604 AELVQPLGRVGDLDSELKAILFHN------------SLRDIVPYEERFNEMYAEAAPAVT 651
Query: 270 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 329
++L++R+D+R C+FTIDP TA DLDDA+SIE++S+ VGVHI+DVS+++ + LD
Sbjct: 652 ADDLVNRRDMRKSCVFTIDPLTARDLDDAISIEKISENEYEVGVHISDVSHYLQENSELD 711
Query: 330 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGR 388
+ RSTS+Y+ I MLP L SL PG D+ +FS+FW ++ G + + R
Sbjct: 712 NIVKQRSTSIYLANEVIHMLPKTLCFRC-SLLPGEDKYSFSVFWRMDGQGKQLGKPAFTR 770
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
+VI SC + +YEHAQ IID + + + +P + F +D+V+ + L+ ++ +
Sbjct: 771 SVINSCSQFAYEHAQKIIDNPREPFTE----DDFPNILNGFTVNDIVQRVTWLHGIASNM 826
Query: 449 KDKRFTDGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 507
+ KRF +GAL + N+K F D G P + + N + EEFMLLAN+ A+ I
Sbjct: 827 RTKRFDNGALTINNAKVRFTLDPLEGEPIGFEIEQLREANHMIEEFMLLANQAVAKFIHD 886
Query: 508 AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 567
AFP A+LR HP P + L+ HGL+LD SSS S+ + ++ D +
Sbjct: 887 AFPKIAVLRNHPPPLTKSLKTLRDKLYAHGLELDYSSSKALQASMRKICQEAADPVAMSA 946
Query: 568 ILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
L +PM A+Y CS + +D HYAL+ P+YTHFTSP+RRYPD++VHR L A L
Sbjct: 947 CLSQLLMKPMARATYICSDGKTEPSDLWHYALSIPIYTHFTSPIRRYPDVMVHRLLAAGL 1006
>gi|324503794|gb|ADY41642.1| Exosome complex exonuclease RRP44, partial [Ascaris suum]
Length = 944
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 168/428 (39%), Positives = 230/428 (53%), Gaps = 25/428 (5%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V ID W S +P H + G G+ + + +L E+ I FS L CLP +PW
Sbjct: 405 VLVAIDSWPRNSRYPIGHYVRTLGAVGDRDTENEVLLLEHDIPHDPFSEAVLKCLPTMPW 464
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
P+E RKDLR+ I ++DP D+DDAL ++S + VGVHIADV++FV PGT
Sbjct: 465 IPPEES--HRKDLRSLVICSVDPPGCVDIDDALHCRQISPDLFEVGVHIADVTHFVRPGT 522
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
A+D EA R T+VY+ +R+I MLP LLS + SL DR AFS+ W +N+ D+++
Sbjct: 523 AMDAEAADRGTTVYLCERRIDMLPDLLSSNLCSLRENEDRFAFSVMWHMNADADILEVKF 582
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
+++IRS L+YE AQ ID ES N V S++ L +SK
Sbjct: 583 HKSIIRSSGALTYEMAQKRIDD----ESMN---------------DAVTLSLRGLMMLSK 623
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRE-DLNFLFEEFMLLANKTAAEVI 505
LK KR GAL L +S+ F D SV + D N + EEFMLLAN + AE I
Sbjct: 624 RLKAKRMAKGALTLASSEIRFNIDSETMDPISVQEKKPLDTNSMVEEFMLLANISVAERI 683
Query: 506 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVL 565
+PD ALLRRHP P + G ++ SS QSL+ A + ++ +L
Sbjct: 684 TTEYPDCALLRRHPVPAAESYKPVIEAARARGFVMNVSSGKALAQSLDNAVD--VNNPML 741
Query: 566 FDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 625
+L TR M A YF SG + + H+ LA P+YTHFTSP+RRY D++VHR L A
Sbjct: 742 NTMLRMMTTRCMTQAVYFSSGSLPME-QYVHFGLAAPIYTHFTSPIRRYADVMVHRLLAA 800
Query: 626 ALEAEKLY 633
A+ A+ +
Sbjct: 801 AIGADSTF 808
>gi|149278034|ref|ZP_01884173.1| exoribonuclease II [Pedobacter sp. BAL39]
gi|149231232|gb|EDM36612.1| exoribonuclease II [Pedobacter sp. BAL39]
Length = 709
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 159/429 (37%), Positives = 229/429 (53%), Gaps = 34/429 (7%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V +I +W E P V+ + G GE ++NAIL + F PE +P
Sbjct: 187 VQVKITDWPEGVKNPIGTVITILGEQGENNTEMNAILAQYGFPLQ-FPPEVEKEANAIPE 245
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
++ +E+ R+D R FTIDP+ A D DDA+S ++L +G VGVHIADV+++V P +
Sbjct: 246 QITADEIKDRRDFRETVTFTIDPADAKDFDDAISFKKLDNGHYEVGVHIADVAHYVTPNS 305
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
ALD EA R+TSVY++ R IPMLP LS V SL P D+L F+ ++L++ ++++ W
Sbjct: 306 ALDKEAYGRATSVYLVDRVIPMLPERLSNGVCSLRPHEDKLCFAAVFELDNKANIINEWF 365
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
GRTVI S + SYE AQ++I+ K D I L E++
Sbjct: 366 GRTVIHSDRRFSYEEAQEVIENK---------------------TGDFSEEILKLNELAY 404
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
IL+DK+F +GA+ E+++ F DE G P + R+D + L E+FMLLANK AE IA
Sbjct: 405 ILRDKKFKNGAISFESTEVKFKLDEDGKPLGVYVKERKDAHKLIEDFMLLANKKVAEFIA 464
Query: 507 RAFPD----SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
+ + + R H +PN+ L F F ++ G +++ S +SL E ++
Sbjct: 465 KKGKGKQKYTFIYRSHDSPNLENLGNFALFAARFGYKINMKSDKDIAKSLNYLMEDVEGK 524
Query: 563 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
++L A R M A Y HY LAF YTHFTSP+RRYPD++VHR
Sbjct: 525 KEQ-NVLTQLAIRSMAKAVYTTKK-------TSHYGLAFDHYTHFTSPIRRYPDVMVHRL 576
Query: 623 LNAALEAEK 631
L A L EK
Sbjct: 577 LAAYLNKEK 585
>gi|255947612|ref|XP_002564573.1| Pc22g05390 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591590|emb|CAP97827.1| Pc22g05390 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1031
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 186/528 (35%), Positives = 270/528 (51%), Gaps = 70/528 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT +VV +I+RS R+ VG ++ N + G R+ + + L P
Sbjct: 381 QPTAKVVGVIKRSWRQ--YVGHVDTNSTGSQASGRRQ--------------QNVFLLPMD 424
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK+ V + D + +R+ LV ID W+ +S +P H + G
Sbjct: 425 KRIPKIRVRTRQASDILGQRI----------LVT--IDSWDRDSRYPTGHFIRALGELET 472
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCI 284
+G E E A+L E + F L CLP W+VP + RKDLR+ I
Sbjct: 473 KGAETE----ALLLEYDVQYKPFPKSVLDCLPSEGHDWKVPVSKEDKGWNGRKDLRDLLI 528
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL L +G VGVHIADVS+FV P +D+EA VR T+VY++ +
Sbjct: 529 CSIDPPGCQDIDDALHARVLPNGNYEVGVHIADVSHFVKPNNPMDLEASVRGTTVYLVDK 588
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP LL ++ SL P V+R AFS+ W++ ++V ++VIRS SYE AQ
Sbjct: 589 RIDMLPHLLGTDLCSLKPYVERYAFSVLWEMTPDAEIVSSNFTKSVIRSREAFSYEQAQL 648
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
ID K + ++ S+++L + SK+L+ KR GAL L + +
Sbjct: 649 RIDDK-------------------SQQDELTESMRALLKFSKVLRQKRMDAGALNLASPE 689
Query: 465 PVFLF--DEYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
DE G P V + D N L EEFMLLAN T I +F +ALLRRH P
Sbjct: 690 VRIESEGDEVGDPLTDVKTKAMLDTNSLVEEFMLLANITVGSKIYESFSQTALLRRHATP 749
Query: 522 NMRKLREFE-AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQL 579
+ + + K ++LD SSS +SL++ + + F+ L+ ATR M
Sbjct: 750 PPQNFEDLQNQLLKKRNMELDVSSSRALAESLDRC---VDPNNPFFNTLVRILATRCMTS 806
Query: 580 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
A YFC+G F ++++ HY LA P+YTHFTSP+RRY DL+VHR L +A+
Sbjct: 807 AEYFCAGAFT-ESEFRHYGLASPIYTHFTSPIRRYADLMVHRQLASAI 853
>gi|401424762|ref|XP_003876866.1| putative rrp44p homologue [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493110|emb|CBZ28394.1| putative rrp44p homologue [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 920
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 268/524 (51%), Gaps = 53/524 (10%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTG+VV ++ S R G L+ G + K N S D I P +
Sbjct: 264 PTGKVVGLL--SSNRRPFCGSLD--------EGELEQVKANTS-----DNVSILFQPKNS 308
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ P++ + + + D + KRL + ID+W S FP H + V G+ G+
Sbjct: 309 RIPRIRISTRHVQDLMDKRL------------SVVIDDWPLYSSFPVGHYVEVLGKIGDR 356
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
+ + IL EN + FS CLP W V ++E R DLR+ CI ++DP D+
Sbjct: 357 DTEATVILLENDVPHYDFSEAVHDCLPKGQWSVTKDEEARRLDLRDLCIVSVDPLGCRDI 416
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDAL ++ VGVHIADV++F+ GTA+D EA RSTSVY++ R+I MLP LL+E
Sbjct: 417 DDALHCRVVNGNHLEVGVHIADVTHFLHEGTAMDDEAAKRSTSVYLVDRRINMLPQLLTE 476
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+ SL DR AFSI W+ + +VV W G+T+IRS L Y AQ +ID D
Sbjct: 477 NLCSLVEAEDRYAFSILWEFDENLNVVRDWFGKTIIRSRGALYYGDAQRMIDNPADT--- 533
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
SD+ S++ L +SK K++R DGAL L + + F D E+
Sbjct: 534 ----------------SDIAVSLRELMRLSKHFKEQREKDGALFLASQEFKFKVDNEHVN 577
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFC 533
P D + + N + EE+ML AN A + ++P LLRRH P +A
Sbjct: 578 PTDMQVYQTFEANSMIEEWMLYANAAVATKVYESYPQWTLLRRHERPAEGAFDTLNDALY 637
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDT 592
K ++LD ++S ++SL++ E +D Y F+ LI TR ++ A YF SG D
Sbjct: 638 GKLHVRLDDTTSLTLNKSLDKC-EDPQDPY--FNKLIRILTTRCLRQAQYFSSGGIPKD- 693
Query: 593 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
++ H+ LA P+YTHFTSP+RRY D++ HR L AA+ E + +H
Sbjct: 694 EFYHFGLAMPIYTHFTSPIRRYADVIAHRQLAAAIGIESVSEQH 737
>gi|432904524|ref|XP_004077374.1| PREDICTED: exosome complex exonuclease RRP44-like [Oryzias latipes]
Length = 941
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/507 (35%), Positives = 259/507 (51%), Gaps = 63/507 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PTG++V II+R+ R G LNV+Q K +R TP
Sbjct: 333 KPTGKIVGIIKRNWR--PFCGMLNVSQ---IKESTRH-----------------LFTPAD 370
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ P++ R+E A T+ + + ID W + S +P H + G G
Sbjct: 371 RRIPRI-------------RIETRQASTLVGQRIMVAIDGWPKNSRYPNGHFVRSLGSAG 417
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
E + +L E+ + FS LS LP +PW + E+++ R+DLR+ + ++DP T
Sbjct: 418 EKGTEEAVLLLEHDVPHQAFSQNVLSFLPKMPWGITPEDMVKRQDLRHLTVCSVDPPGCT 477
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+VY+ ++I M+P LL
Sbjct: 478 DIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDKEAANRGTTVYLCGKRIDMVPELL 537
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL V+RLAFS W++N +++ ++VI S L+Y AQ ID D
Sbjct: 538 SSNLCSLRSNVERLAFSCIWEMNHNAEILKTQFTKSVINSKASLTYAEAQMRID---DTN 594
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
+ D+ S++ L +++KILK KR +GAL L + + F D E
Sbjct: 595 KKD----------------DITESLRGLNKLAKILKRKRIENGALTLSSLEVRFHIDSET 638
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P D + N + EEFMLLAN + A+ I FPD ALLR+HPAP
Sbjct: 639 HDPIDLQTKELMETNSMVEEFMLLANISVAQKIYDEFPDCALLRKHPAPPPSNYDILLKA 698
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 591
+++ T S+ SL+ A+ D + F+ L+ ATR M A YFCSG D
Sbjct: 699 AKSMNVEIHTDSAKALADSLDVAK---VDGFSYFNTLLRILATRCMMQAVYFCSG---MD 752
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLV 618
+D+ HY LA P+YTHFTSP+RRY +++
Sbjct: 753 SDFHHYGLASPIYTHFTSPIRRYKNII 779
>gi|195111154|ref|XP_002000144.1| GI10069 [Drosophila mojavensis]
gi|193916738|gb|EDW15605.1| GI10069 [Drosophila mojavensis]
Length = 979
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 264/523 (50%), Gaps = 61/523 (11%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
+ PTGR+V I+ R +W Y G + + D P
Sbjct: 345 RTPTGRIVGIVRR--------------KWRQYCGILQPSL--------IEDTTRHIFVPA 382
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
K P++ R+E AT ++ + + ID W S +P H + G
Sbjct: 383 DRKIPRI-------------RIETRQATKLQNQRIVVTIDSWPRNSRYPHGHFVRSLGPL 429
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G + + IL E+ + FS E LS LP +PW + +E+ R DLR+ I ++DP
Sbjct: 430 GNMATENEVILLEHDVPHCKFSEEVLSFLPKMPWTITEEDYAKRVDLRDLYICSVDPPGC 489
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+VY++ ++I M+P L
Sbjct: 490 TDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNALDKEAAARGTTVYLVGKRIDMVPEL 549
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL G +R AFS+ W+++ +++ + ++VI+S ++YE AQ IID
Sbjct: 550 LSSNLCSLVGGEERFAFSVVWEVDHQANILAKRFHKSVIKSKRAMTYEEAQAIID----- 604
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
+ + ++ +S++ L ++KILK +R +GAL L + + F D E
Sbjct: 605 --------------DEAQTGEIAKSLRHLNRLAKILKKRRMDNGALVLASPEIRFQVDSE 650
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P + D N + EEFMLLAN + A+ IA F + A+LRRHP P
Sbjct: 651 THEPLEVEAKQMRDTNSMVEEFMLLANISVAQHIAAEFTECAVLRRHPKPPNTNFDPLIK 710
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
G ++ T + + SL++ +K D F+ +I ATR M A YF SG +
Sbjct: 711 AARYQGFEVVTDTGLELAHSLDKC---VKADNPYFNTMIRILATRCMMQAVYFISGSLQK 767
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
+ ++ HY LA +YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 768 E-EFFHYGLAAEIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 809
>gi|449305179|gb|EMD01186.1| hypothetical protein BAUCODRAFT_29619 [Baudoinia compniacensis UAMH
10762]
Length = 994
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 195/562 (34%), Positives = 277/562 (49%), Gaps = 67/562 (11%)
Query: 84 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 143
DS+E + + ++ + R + + K+PT +VV II+R+ W
Sbjct: 351 DSSEAIVTERERRALQEEVRRAHGQVAEGKKQPTAKVVGIIKRN--------------WR 396
Query: 144 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 203
Y G KD+ + R+ S ++ + L P + PK+ V + + +R
Sbjct: 397 QYVGHVDKDSVRTRTKDSRA-QQTVFLVPMDKRIPKIRVRTRQAAGLLGQR--------- 446
Query: 204 MELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLS 259
V ID W+ ES +P H + G +G E E A+L E + F L
Sbjct: 447 ---VLVTIDTWDRESRYPVGHFIRSLGELETKGAETE----ALLLEWDVQYRPFPRTVLD 499
Query: 260 CLPCV--PWEVPQE----ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 313
CLP WEVP+ R+DL + I +IDP D+DDAL L +G VGV
Sbjct: 500 CLPPEGHEWEVPKSVDDPGWTGRRDLTDLLICSIDPPGCVDIDDALHARLLPNGNFEVGV 559
Query: 314 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 373
HIADVS+FV P A+D EA +R T+VY++ ++I MLP+LL ++ SL P ++R AFS+ W
Sbjct: 560 HIADVSHFVKPNNAMDKEASLRGTTVYLVDKRIDMLPMLLGTDLCSLKPYIERYAFSVIW 619
Query: 374 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 433
+L+ D+V ++VIRS SYE AQ ID K + D
Sbjct: 620 ELDKNADIVSSTFTKSVIRSREAFSYEAAQLRIDDK-------------------SQQDD 660
Query: 434 VVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEE 492
+ + ++ L +SK L+ KR GAL L + + V E P D D N L EE
Sbjct: 661 LTKGMRHLMMLSKRLRAKRMAAGALNLASPEVRVQTESETSDPVDVQTKQLLDTNQLVEE 720
Query: 493 FMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQS 551
FMLLAN + A I AFP +ALLRRH AP E K G++L T SS S
Sbjct: 721 FMLLANISVASKIYEAFPQTALLRRHAAPPKTNFEELGNQLKVKKGMELHTDSSKAVADS 780
Query: 552 LEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSP 610
L++ ++ + F+ L+ ATR M A YFCSG + +++ HY LA +YTHFTSP
Sbjct: 781 LDKCVDQSEP---FFNTLVRILATRCMMSAEYFCSGT-QAPSEFRHYGLASEIYTHFTSP 836
Query: 611 LRRYPDLVVHRTLNAALEAEKL 632
+RRY DL HR L AA++ E L
Sbjct: 837 IRRYADLEAHRQLAAAIDYEPL 858
>gi|407853329|gb|EKG06373.1| mitochondrial exoribonuclease DSS-1, putative [Trypanosoma cruzi]
Length = 604
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 180/483 (37%), Positives = 264/483 (54%), Gaps = 36/483 (7%)
Query: 253 FSPESLSCLPCVPWEVPQEELL---SRKDLRNF-CIFTIDPSTATDLDDALSIERLSDGI 308
FS E+ +C+P +EVP +++L R+DLR + +IDP+TA DLDDALSI G
Sbjct: 4 FSDEAYACVP-EEFEVPDKQVLLHMGRRDLREEEFVCSIDPATARDLDDALSITSTPGGY 62
Query: 309 SRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 368
RVGVHIADVSYFV G+ LD EA+ RSTSVY++++ IPMLP LSE+ SLNPG D+ A
Sbjct: 63 -RVGVHIADVSYFVPAGSPLDEEARERSTSVYLVEQVIPMLPRKLSEDYCSLNPGSDKFA 121
Query: 369 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 428
FS + L+ G+V W G++VIR+ C+L+YE AQ I+DG V + G+ +
Sbjct: 122 FSCIFHLDHHGNVKSEWFGQSVIRNRCRLTYEDAQRILDGDKTVFDTLDFGDEKDVRHLC 181
Query: 429 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT---PYDSVLSGRED 485
+ SI+ L+E++ ++ G L + N K +LF++ PY +S + +
Sbjct: 182 IR---IEVSIRKLFELASKMRSASMNRGRLTIGNMKVRYLFEDIANPTFPYGFGISRQIE 238
Query: 486 LNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 545
N+L EEFMLLAN AE I + PD ALLRRH P+ +K+ + S GL+L SS
Sbjct: 239 ANWLVEEFMLLANARVAEKIVQYMPDQALLRRHEPPDRKKILTLKEALSSVGLELRGGSS 298
Query: 546 GQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYT 605
LE + D Y +++ Y+ ++ A YF +G + + GHYALA P YT
Sbjct: 299 KSLQGFLENTKN--SDFYDELCVILKYS---LKQAVYFVNGCEETEAYRGHYALALPWYT 353
Query: 606 HFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAE 665
HFTSP+RRY D++ HR L ALE E + K + PK G
Sbjct: 354 HFTSPIRRYSDIIAHRQLLCALEIESIV-KESKGGPKERRHPVSPGSI------------ 400
Query: 666 SLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLL 725
+A ++ KY P +++ ++ N +K+ R V DA + ++ LK + ++
Sbjct: 401 -----DANQLSTRKYFYPVSEV-ESIVEKANSKKIKARQVSDASLGIFFCYYLKALKRVM 454
Query: 726 SEA 728
E+
Sbjct: 455 DES 457
>gi|261334743|emb|CBH17737.1| exosome complex exonuclease RRP44p homologue,putative [Trypanosoma
brucei gambiense DAL972]
Length = 972
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 175/463 (37%), Positives = 245/463 (52%), Gaps = 38/463 (8%)
Query: 168 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 227
+ P + P++ + L D KRL + ID+W E S FP H +
Sbjct: 395 VLFQPKDNRIPRIRITTAHLGDLKDKRL------------SVIIDDWGEHSSFPVGHYVE 442
Query: 228 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTI 287
V G G+ + + IL EN I FS CLP W V +EEL +R DLR+ C+ ++
Sbjct: 443 VLGTIGDKDTEAKVILLENDIPHYDFSEAVYDCLPKGEWNVTEEELGNRLDLRDLCVVSV 502
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP D+DDAL R++ VGVHIADV++F+ GTA+D EA RSTSVY++ R+I
Sbjct: 503 DPLGCRDIDDALHCRRVNGNHLEVGVHIADVTHFLKEGTAMDEEAAKRSTSVYLVDRRIN 562
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 407
MLP LL+E + S+ DR AFSI W+ + VV + G+TVIRS L Y AQ +ID
Sbjct: 563 MLPQLLTENLCSIVADEDRYAFSIMWEFDENYSVVREFFGKTVIRSRAALYYGDAQRMID 622
Query: 408 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
D S+ S++ L ++S+ + +R DGAL L + + F
Sbjct: 623 DPED-------------------ESEAAVSLRYLMQLSRHFRKRREKDGALFLCSQEFKF 663
Query: 468 LFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
D ++ P D D N + EE+ML AN AA + +FP LLRRH AP
Sbjct: 664 KVDNDHVNPTDMQAYQTFDSNSMIEEWMLFANAAAARRVYASFPRWTLLRRHQAPAENAF 723
Query: 527 REF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILI-NYATRPMQLASYFC 584
EA K G++LD ++S ++SLE+ + D Y F+ LI TR ++ A YF
Sbjct: 724 DTLNEAIRRKIGVKLDDTTSLALNESLEKCVDP-SDPY--FNRLIRTLVTRCLRQAQYFS 780
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
S + D ++ H+ LA P+YTHFTSP+RRY D++VHR L AAL
Sbjct: 781 SSEVSKD-EFHHFGLAMPIYTHFTSPIRRYADVIVHRQLAAAL 822
>gi|14250908|emb|CAC39259.1| Rrp44p homologue [Trypanosoma brucei]
Length = 972
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 175/463 (37%), Positives = 245/463 (52%), Gaps = 38/463 (8%)
Query: 168 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 227
+ P + P++ + L D KRL + ID+W E S FP H +
Sbjct: 395 VLFQPKDNRIPRIRITTAHLGDLKDKRL------------SVIIDDWGEHSSFPVGHYVE 442
Query: 228 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTI 287
V G G+ + + IL EN I FS CLP W V +EEL +R DLR+ C+ ++
Sbjct: 443 VLGTIGDKDTEAKVILLENDIPHYDFSEAVYDCLPKGEWNVTEEELGNRLDLRDLCVVSV 502
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP D+DDAL R++ VGVHIADV++F+ GTA+D EA RSTSVY++ R+I
Sbjct: 503 DPLGCRDIDDALHCRRVNGNHLEVGVHIADVTHFLKEGTAMDEEAAKRSTSVYLVDRRIN 562
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 407
MLP LL+E + S+ DR AFSI W+ + VV + G+TVIRS L Y AQ +ID
Sbjct: 563 MLPQLLTENLCSIVADEDRYAFSIMWEFDENYSVVREFFGKTVIRSRAALYYGDAQRMID 622
Query: 408 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
D S+ S++ L ++S+ + +R DGAL L + + F
Sbjct: 623 DPED-------------------ESEAAVSLRYLMQLSRHFRKRREKDGALFLCSQEFKF 663
Query: 468 LFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
D ++ P D D N + EE+ML AN AA + +FP LLRRH AP
Sbjct: 664 KVDNDHVNPTDMQAYQTFDSNSMIEEWMLFANAAAARRVYASFPRWTLLRRHQAPAENAF 723
Query: 527 REF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILI-NYATRPMQLASYFC 584
EA K G++LD ++S ++SLE+ + D Y F+ LI TR ++ A YF
Sbjct: 724 DTLNEAIRRKIGVKLDDTTSLALNESLEKCVDP-SDPY--FNRLIRTLVTRCLRQAQYFS 780
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
S + D ++ H+ LA P+YTHFTSP+RRY D++VHR L AAL
Sbjct: 781 SSEVSKD-EFHHFGLAMPIYTHFTSPIRRYADVIVHRQLAAAL 822
>gi|425766170|gb|EKV04795.1| Exosome complex exonuclease exoribonuclease (Rrp44), putative
[Penicillium digitatum Pd1]
gi|425774524|gb|EKV12827.1| Exosome complex exonuclease exoribonuclease (Rrp44), putative
[Penicillium digitatum PHI26]
Length = 1071
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 192/560 (34%), Positives = 279/560 (49%), Gaps = 70/560 (12%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 142
++ TE V + ++ + R + +S +PT +VV +I+RS W
Sbjct: 389 TEETEAVVTDRERKALQEEVRKAHGKNSDGKPQPTAKVVGVIKRS--------------W 434
Query: 143 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
Y G DA S S ++ + L P + PK+ V + + + +R+
Sbjct: 435 RQYVG--HVDASSTGSQASGRRQQNVFLLPMDKRIPKIRVRTRQASEILGQRI------- 485
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 258
LV ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 486 ---LVT--IDSWDRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYKPFPKSVL 536
Query: 259 SCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
CLP W+VP + RKDLR+ I +IDP D+DDAL L +G VG
Sbjct: 537 DCLPSEGHDWKVPASKEDKGWNGRKDLRDLLICSIDPPGCQDIDDALHARLLPNGNYEVG 596
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVS+FV P +DIEA VR T+VY++ ++I MLP LL ++ SL P V+R AFS+
Sbjct: 597 VHIADVSHFVKPNNPMDIEASVRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVL 656
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W++ ++V ++VIRS SYE AQ ID K +
Sbjct: 657 WEITPDAEIVSSNFTKSVIRSREAFSYEQAQLRIDDK-------------------SQQD 697
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFL 489
++ S+++L + SKIL+ KR GAL L + + DE G P V + D N L
Sbjct: 698 ELTESMRTLLKFSKILRQKRMDAGALNLASPEVRIESEGDEVGDPLTDVKTKAMLDTNSL 757
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFE-AFCSKHGLQLDTSSSGQF 548
EEFMLLAN T + +F +ALLRRH P + + + K ++LD SSS
Sbjct: 758 VEEFMLLANITVGSKVYESFSQTALLRRHATPPPQNFEDLQNQLSKKRNMELDVSSSRAL 817
Query: 549 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 607
SL++ + + F+ L+ ATR M A YFC+G F ++++ HY LA P+YTHF
Sbjct: 818 ADSLDRC---VDPNNPFFNTLVRILATRCMTSAEYFCAGAFA-ESEFRHYGLASPIYTHF 873
Query: 608 TSPLRRYPDLVVHRTLNAAL 627
TSP+RRY DL+VHR L +A+
Sbjct: 874 TSPIRRYADLMVHRQLASAI 893
>gi|427791021|gb|JAA60962.1| Putative exosomal 3'-5' exoribonuclease complex subunit, partial
[Rhipicephalus pulchellus]
Length = 908
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 240/445 (53%), Gaps = 26/445 (5%)
Query: 192 KKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 250
K R+E A T+ + + ID W +S +P H++ G G+ + +L E+ I
Sbjct: 376 KIRIETRQAETLCRQRIVVSIDSWPRDSRYPLGHLVRALGEIGDRATENQVLLLEHDIPH 435
Query: 251 SGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISR 310
FS L CLP PW + +E RKDLR+ CI ++DP TD+DDAL G
Sbjct: 436 QCFSRAVLDCLPSTPWTIGPKEEQGRKDLRHLCICSVDPPGCTDIDDALHCREQPSGNYE 495
Query: 311 VGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFS 370
VGVHIADVS+FV P TALD EA R T+VY++ ++I M+P LLS ++ SL G +RLAFS
Sbjct: 496 VGVHIADVSHFVRPKTALDQEAANRGTTVYLVDQRIDMVPELLSSDLCSLRGGEERLAFS 555
Query: 371 IFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFE 430
+ W++ +VV+ +++I+S L+Y AQ ID K +
Sbjct: 556 VVWEMTPEAEVVNTDFHKSIIKSRAALTYAEAQARIDDK-------------------AK 596
Query: 431 WSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFL 489
D+ ++ L +++K+LK +R +GAL L +++ F D E P D + N +
Sbjct: 597 GDDLTLGLRGLNKLAKLLKARRIANGALTLASTEVRFHVDSETHDPIDVQTKQILETNSM 656
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFH 549
EEFMLLAN + A+ I + FP+ ALLRRHP+P L G +L S
Sbjct: 657 VEEFMLLANGSVAKHIFQEFPECALLRRHPSPAPANLEPLVKAGLSKGFELKVDSGLHLA 716
Query: 550 QSLEQAREKLKDDYVLFDILINY-ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 608
+SL++A + D F++++ ATR M A YF SG + D+ HY LA P YTHFT
Sbjct: 717 ESLDKA---VLPDSPYFNVMLRMVATRCMARALYFSSGCVALE-DFFHYGLALPYYTHFT 772
Query: 609 SPLRRYPDLVVHRTLNAALEAEKLY 633
SP+RRY DL+VHR L + AE Y
Sbjct: 773 SPIRRYADLMVHRLLAVCVGAEGTY 797
>gi|398017919|ref|XP_003862146.1| rrp44p homologue, putative [Leishmania donovani]
gi|322500375|emb|CBZ35452.1| rrp44p homologue, putative [Leishmania donovani]
Length = 920
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 268/524 (51%), Gaps = 53/524 (10%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTG+VV ++ S R G L+ G + K N S D I P +
Sbjct: 264 PTGKVVGLL--SSNRRPFCGSLD--------EGELEQVKANMS-----DNVSILFQPKNN 308
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ P++ + + + D + KRL + ID+W S FP H + V G+ G+
Sbjct: 309 RIPRIRISTRHVQDLMDKRL------------SVVIDDWPLYSSFPVGHYVEVLGKIGDR 356
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
+ + IL EN + FS CLP W V ++E R DLR+ C+ ++DP D+
Sbjct: 357 DTEATVILLENDVPHYDFSEAVHDCLPKGQWSVAKDEEARRLDLRDLCVVSVDPLGCRDI 416
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDAL ++ VGVHIADV++F+ GTA+D EA RSTSVY++ R+I MLP LL+E
Sbjct: 417 DDALHCRVVNGNHLEVGVHIADVTHFLHEGTAMDDEAAKRSTSVYLVDRRINMLPQLLTE 476
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+ SL DR AFSI W+ + +VV W G+T+IRS L Y AQ +ID D
Sbjct: 477 NLCSLVEAEDRYAFSILWEFDENLNVVRDWFGKTIIRSRGALYYGDAQRMIDNPTDT--- 533
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
SD+ S++ L +SK K +R DGAL L + + F D E+
Sbjct: 534 ----------------SDIAVSLRELMRLSKHFKAQREKDGALFLASQEFKFKVDNEHVN 577
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFC 533
P D + + N + EE+ML AN A + ++P LLRRH P +A
Sbjct: 578 PTDMQVYQTFEANSMIEEWMLYANAAVATKVYESYPQWTLLRRHERPAEGAFDTLNDALY 637
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDT 592
K ++LD ++S ++SL++ E +D Y F+ LI TR ++ A YF SG D
Sbjct: 638 GKLHVRLDDTTSLTLNKSLDKC-EDPQDPY--FNKLIRILTTRCLRQAQYFSSGGIPKD- 693
Query: 593 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
++ H+ LA P+YTHFTSP+RRY D++VHR L AA+ E + +H
Sbjct: 694 EFYHFGLAMPIYTHFTSPIRRYADVIVHRQLAAAIGIENVSEQH 737
>gi|195374758|ref|XP_002046170.1| GJ12662 [Drosophila virilis]
gi|194153328|gb|EDW68512.1| GJ12662 [Drosophila virilis]
Length = 1298
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/424 (37%), Positives = 236/424 (55%), Gaps = 40/424 (9%)
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE-------------VP 269
A ++ GR G ++ ++ AIL+ N S VP+E V
Sbjct: 658 AELVQPVGRVGNLDDELKAILFHN------------SLRDVVPFEERFNQMYAQSAPPVT 705
Query: 270 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 329
++L++R+D+R C+FTIDP TA DLDDALSIE+L + + VGVHI+DVS+++ + LD
Sbjct: 706 SQDLVNRRDMRKSCVFTIDPLTARDLDDALSIEQLGENVFEVGVHISDVSHYLQENSELD 765
Query: 330 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGR 388
+ RSTS+Y+ I MLP L SL PG D+ +FS+FW ++ G+ +D+ R
Sbjct: 766 NIVKERSTSIYLANEVIHMLPQTLCFRC-SLLPGEDKFSFSVFWRMDGDGNQLDKPQFTR 824
Query: 389 TVIRSCCKLSYEHAQDIIDG---KF-DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 444
+++ SC + +YEHAQ IID +F DV+ +P + F +D+V+ + L+ +
Sbjct: 825 SIMNSCTQFAYEHAQKIIDNPRERFTDVD--------FPNILNGFTVNDIVKRVTWLHGI 876
Query: 445 SKILKDKRFTDGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ ++ KRF +GAL + N+K F D G P + + + N + EEFMLLAN+ A+
Sbjct: 877 ACNMRGKRFDNGALTINNAKVRFSLDPLTGEPMGFEVEKQREANHMIEEFMLLANQAVAK 936
Query: 504 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 563
I A+P A+LR HP P + L+ G LD SSS S+++ + D
Sbjct: 937 FIHDAYPKIAVLRNHPPPLTKSLKSLREKLLSQGFDLDYSSSKALQASMQRLCSEAADPI 996
Query: 564 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
+ L +PM A+YFCS + +D HYAL+ P+YTHFTSP+RRYPD++VHR L
Sbjct: 997 AMSACLSQLLMKPMARATYFCSDGKTEPSDLWHYALSIPIYTHFTSPIRRYPDVMVHRLL 1056
Query: 624 NAAL 627
A L
Sbjct: 1057 AAGL 1060
>gi|407424877|gb|EKF39174.1| mitochondrial exoribonuclease DSS-1, putative [Trypanosoma cruzi
marinkellei]
Length = 966
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 187/526 (35%), Positives = 269/526 (51%), Gaps = 54/526 (10%)
Query: 116 PTGRVVSI--IERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
P GRVV I +ER P G ++V + +R A + + S +V + P
Sbjct: 328 PVGRVVGITSMERRP----FCGSIDVEEL------TRLMASEGKISGAVS----VLFQPK 373
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ P++ + + L D KRL + ID+W E + FP H + V G G
Sbjct: 374 DNRIPRIRISTRHLEDLKDKRL------------SVIIDDWPEYNSFPVGHYVEVLGTIG 421
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ + + IL EN + FS CLP W V ++EL R DLR+ C+ ++DP
Sbjct: 422 DKDTEAKVILLENDVPHYDFSEAVYDCLPKGQWSVSKDELERRLDLRDLCVVSVDPLGCR 481
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL +++ VGVHIADV++F+ TA+D EA RSTSVY++ R+I MLP LL
Sbjct: 482 DIDDALHCRVVNENHLEVGVHIADVTHFLHENTAMDEEAAKRSTSVYLVDRRINMLPQLL 541
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
+E + S+ DR AFSI W+ + +VV + G+TVIRS L Y AQ +ID DV
Sbjct: 542 TENLCSIVSNEDRYAFSILWEFDEEYNVVRDYFGKTVIRSRAALYYGDAQRMID---DVN 598
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
S++ S++ L +S+ K KR DGAL L + + F D ++
Sbjct: 599 DK----------------SEIAVSLRHLMNISRHFKAKREKDGALFLASQEFKFKVDNDH 642
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EA 531
P D + + N + EE+ML AN AA + +FP LLRRH P EA
Sbjct: 643 VNPTDMQVYQTFEANSMIEEWMLFANAAAARKVYESFPRWTLLRRHQRPAENAFDTLNEA 702
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
K GL+LD ++S + SL + D F+ LI TR ++ A YF S +
Sbjct: 703 LERKLGLRLDDTTSFTLNMSLNAC---IDPDDAYFNQLIRILVTRCLRQAQYFSSSEVSQ 759
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
D ++ H+ LA P+YTHFTSP+RRY D++VHR L AAL ++ KH
Sbjct: 760 D-EFYHFGLAMPIYTHFTSPIRRYADVIVHRQLAAALGIMQVSEKH 804
>gi|195035982|ref|XP_001989450.1| GH18811 [Drosophila grimshawi]
gi|193893646|gb|EDV92512.1| GH18811 [Drosophila grimshawi]
Length = 979
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 263/523 (50%), Gaps = 61/523 (11%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
+ PTGR+V I+ R +W Y G + + D P
Sbjct: 345 RTPTGRIVGIVRR--------------KWRQYCGILQPSL--------IEDTTRHIFVPA 382
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
K P++ R+E A+ ++ + + ID W S +P H + G
Sbjct: 383 DRKIPRI-------------RIETRQASKLQNQRIIVTIDSWPRNSRYPHGHFVRSLGPL 429
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G + + IL E+ + FS E L LP +PW + +E+ R DLR+ I ++DP
Sbjct: 430 GNMATENEVILLEHDVPHCKFSEEVLGFLPKMPWSITEEDYAKRVDLRDLYICSVDPPGC 489
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG A+D EA R T+VY++ ++I M+P L
Sbjct: 490 TDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNAMDKEAAARGTTVYLVGKRIDMVPEL 549
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL GV+R AFS W+++ +++D+ ++VI+S ++YE AQ +ID
Sbjct: 550 LSSNLCSLVGGVERFAFSCVWEVDREANILDKRFHKSVIKSKRAMTYEEAQALIDD---- 605
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
P G+ + +S++ L ++KILK +R +GAL L + + F D E
Sbjct: 606 ----------PTQTGE-----IAKSLRHLNRLAKILKKRRMDNGALVLASPEIRFQVDSE 650
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P + D N + EEFMLLAN T A+ IA F + A+LRRHP P
Sbjct: 651 THEPLEVEAKQMRDTNSMVEEFMLLANITVAQHIADEFTECAVLRRHPKPPSTNFDPLVK 710
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
G ++ T S + SL++ +K D F+ +I TR M A YF SG +
Sbjct: 711 AARYQGFEVVTDSGLELAHSLDKC---VKADNPYFNTMIRILTTRCMMQAVYFISGSLQK 767
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
+ ++ HY LA +YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 768 E-EFFHYGLAADIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 809
>gi|71755823|ref|XP_828826.1| exosome complex exonuclease RRP44p-like protein [Trypanosoma
brucei]
gi|70834212|gb|EAN79714.1| exosome complex exonuclease RRP44p homologue [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 972
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 169/420 (40%), Positives = 232/420 (55%), Gaps = 26/420 (6%)
Query: 211 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 270
ID+W E S FP H + V G G+ + + IL EN I FS CLP W V +
Sbjct: 426 IDDWGEHSSFPVGHYVEVLGTIGDKDTEAKVILLENDIPHYDFSEAVYDCLPKGEWNVTE 485
Query: 271 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 330
EEL +R DLR+ C+ ++DP D+DDAL R++ VGVHIADV++F+ GTA+D
Sbjct: 486 EELGNRLDLRDLCVVSVDPLGCRDIDDALHCRRVNGNHLEVGVHIADVTHFLKEGTAMDE 545
Query: 331 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 390
EA RSTSVY++ R+I MLP LL+E + S+ DR AFSI W+ + VV + G+TV
Sbjct: 546 EAAKRSTSVYLVDRRINMLPQLLTENLCSIVADEDRYAFSIMWEFDENYSVVREFFGKTV 605
Query: 391 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 450
IRS L Y AQ +ID D S+ S++ L ++S+ +
Sbjct: 606 IRSRAALYYGDAQRMIDDPED-------------------ESEAAVSLRYLMQLSRHFRK 646
Query: 451 KRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 509
+R DGAL L + + F D ++ P D D N + EE+ML AN AA + +F
Sbjct: 647 RREKDGALFLCSQEFKFKVDNDHVNPTDMQAYQTFDSNSMIEEWMLFANAAAARRVYASF 706
Query: 510 PDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 568
P LLRRH AP EA K GL+LD ++S ++SLE+ + D Y F+
Sbjct: 707 PRWTLLRRHQAPAENAFDTLNEAIRRKIGLKLDDTTSLALNESLEKCVDP-SDPY--FNR 763
Query: 569 LI-NYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
LI TR ++ A YF S + D ++ H+ LA P+YTHFTSP+RRY D++VHR L AAL
Sbjct: 764 LIRTLVTRCLRQAQYFSSSEVSKD-EFHHFGLAMPIYTHFTSPIRRYADVIVHRQLAAAL 822
>gi|350420682|ref|XP_003492589.1| PREDICTED: DIS3-like exonuclease 2-like [Bombus impatiens]
Length = 784
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 284/568 (50%), Gaps = 74/568 (13%)
Query: 211 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 270
I +W + F + + G G+++ + NAIL E + + +S + LP + + +
Sbjct: 222 ITDW-RKPKFAVGQIEKIIGSIGDIKAESNAILLEYDLDVTPYSLDVTKELPSSDYSLTE 280
Query: 271 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 330
++ R+D ++ CIFTIDP TA DLDD++S + L +G +GVHI+DV+++V + LDI
Sbjct: 281 NDIKDREDWKDECIFTIDPDTAVDLDDSVSCKPLENGNYEIGVHISDVTHYVEFLSPLDI 340
Query: 331 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 390
+ R+T++YM MLP L +V SL+PG D+LAFS+ W++ VV+ +TV
Sbjct: 341 QVSKRATTIYMADNIYHMLPKELC-QVCSLSPGQDKLAFSVIWEMTQDARVVNYRFAKTV 399
Query: 391 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP----QLYGQFEWSDVVRSIKSLYEVSK 446
IRSCC++SY+H Q +I+ WP + G ++ +D+ + L+ ++
Sbjct: 400 IRSCCQMSYQHVQKMIENP---------EYNWPDNSINIDGNYKLNDLSIKVNILHNLAI 450
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI 505
++ +RF +GALR++ K D G P + ++D N L EEFMLLAN T A +
Sbjct: 451 QMRKRRFQNGALRIDQPKLCVKVDRITGLPISYNIEEQQDSNRLIEEFMLLANMTVATHL 510
Query: 506 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDD- 562
P++ALLR H P+ R L + K G+ LD SS H S+++ E L +DD
Sbjct: 511 YNVIPETALLRNHREPSKRILSTTQEMLQKFGIHLDIKSSTSLHASMKRCEEALETEDDE 570
Query: 563 ------YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 616
Y + ++ N +R M A+Y CS K + + HYAL VYTHFTSP+RRY D
Sbjct: 571 RRIIMKYRMM-VVNNLCSRAMTRATYICSSTVKAEEELRHYALNISVYTHFTSPIRRYSD 629
Query: 617 LVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVA 676
VVHR L + L I K+ ESL
Sbjct: 630 CVVHRLLYSTLR---------------------------NIDMPKEWTESL--------- 653
Query: 677 ALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPR 736
C I A +CN +K + ++ +LY L+ K +++ V ++
Sbjct: 654 -------CKSI----AANCNIKKYNAKMAQERSNELYFTYLIDLKGPIVTMGIVFSVHES 702
Query: 737 FMTIYIEKLAIERRIYYDEVEGL-IVEW 763
+TI + + I+ R+ + +E L +VE+
Sbjct: 703 LITIILCQFGIKLRVSFTHLENLALVEY 730
>gi|195389268|ref|XP_002053299.1| GJ23805 [Drosophila virilis]
gi|194151385|gb|EDW66819.1| GJ23805 [Drosophila virilis]
Length = 979
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 174/522 (33%), Positives = 262/522 (50%), Gaps = 59/522 (11%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
+ PTGR+V I+ R +W Y G + + D P
Sbjct: 345 RTPTGRIVGIVRR--------------KWRQYCGILQPSL--------IEDTTRHIFVPA 382
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
K P++ + + A ++ + + ID W S +P H + G G
Sbjct: 383 DRKIPRIRIETRQA------------AKLQNQRIIVTIDSWPRNSRYPHGHFVRSLGPLG 430
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ + IL E+ + FS E LS LP +PW + +E+ R DLR+ I ++DP T
Sbjct: 431 NMATENEVILLEHDVPHCKFSEEVLSFLPKMPWTITEEDYAKRVDLRDLYICSVDPPGCT 490
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL L +G VGVHIADVS+F+ PG ALD EA R T+VY++ ++I M+P LL
Sbjct: 491 DIDDALHCRELPNGNLEVGVHIADVSHFIRPGNALDKEAAARGTTVYLVGKRIDMVPELL 550
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL GV+R AFS W++++ +V+ + ++VI+S ++YE AQ +ID
Sbjct: 551 SSNLCSLVGGVERFAFSCVWEVDNQANVLSKRFHKSVIKSKRAMTYEEAQALID------ 604
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
S GE + +S++ L ++KILK +R +GAL L + + F D E
Sbjct: 605 DSTETGE-------------IAKSLRHLNRLAKILKKRRMDNGALVLASPEIRFQVDSET 651
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P + D N + EEFMLLAN T A+ IA F + A+LRRHP P
Sbjct: 652 HEPLEVEAKQMRDTNSMVEEFMLLANITVAQHIAAEFTECAVLRRHPKPPPTNFDPLVKA 711
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 591
G ++ ++ + SL++ +K D F+ +I TR M A YF SG + +
Sbjct: 712 ARYQGFEVAINTGLELAHSLDKC---VKADNPYFNTMIRILTTRCMMQAVYFISGSLQKE 768
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
++ HY LA +YTHFTSP+RRY D++VHR L A++ A+ Y
Sbjct: 769 -EFFHYGLAADIYTHFTSPIRRYSDIMVHRLLAASIGADSTY 809
>gi|351695548|gb|EHA98466.1| DIS3-like exonuclease 1 [Heterocephalus glaber]
Length = 971
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 204/665 (30%), Positives = 321/665 (48%), Gaps = 102/665 (15%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F P +E +Q +P
Sbjct: 247 PTGRVVGILQKN-WRDYVVTF--------------------------PSKEEVQSQGRNP 279
Query: 176 KYPKMVVLVKD--LPDSIKKRLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ K++V D +P K R+ A T++ V RID W S +P H + V GR
Sbjct: 280 Q--KILVTPWDYRIP---KIRISTQQAETLQDFRVIVRIDSWESTSVYPNGHFVCVLGRI 334
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTI 287
G++E +I IL EN+I FS L +P PW+V EE R+DLR +F+I
Sbjct: 335 GDLEGEIATILVENSISVVPFSEAQLCEMPVNTPEKPWKVSPEEERKRRDLRRTHLVFSI 394
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP D+DDALS+ L++G +GVHIADV++FV + D+EA+ R+T+ Y+ R+
Sbjct: 395 DPKGCEDVDDALSVRTLNNGNLELGVHIADVTHFVALNSYTDVEARTRATTYYLADRRYD 454
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP +LS ++ SL GVDR A S+ W+L+ A ++ W GRT+IRS KL YE AQ+++
Sbjct: 455 MLPSVLSADLCSLLGGVDRYAVSVTWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELL 514
Query: 407 DGKFDV-----ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
G F + E N+ +G + W +I L ++++ ++ +R GAL LE
Sbjct: 515 HGNFGIADEIPEFKNSDEKGRQARLEELAW-----AIGKLTDIARHVRARRNRCGALELE 569
Query: 462 NSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
+ D+ +D + +++ E M+LAN A I +FP ALLR+HP P
Sbjct: 570 GVEIRVQLDDKKNIHDLIPKQPLEVHETVAECMILANHWVARKIWESFPHQALLRQHPPP 629
Query: 522 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 581
+ E G +DT S+ SL++A + D ++ +L + AT+ M A
Sbjct: 630 HQEFFAELRECARAKGFCIDTRSNKTLADSLDKAED--PSDPIVNQLLRSMATQAMSNAL 687
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLP 641
YF +G + ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M
Sbjct: 688 YFSTGSCT-EKEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK------KMEI 740
Query: 642 KNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLA 701
K N + +KD E + H N+R A
Sbjct: 741 KEN------------LLSNKDLEE-------------------------LCRHINNRNRA 763
Query: 702 CRNVKDACVKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
++ + +L+ + K K E +S+ + ++ + ++I + I+ Y
Sbjct: 764 AQHSQKQSTELFQCMYFKDKDPDTEERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLKNK 823
Query: 757 EGLIV 761
+GL++
Sbjct: 824 DGLVM 828
>gi|126277456|ref|XP_001375995.1| PREDICTED: DIS3-like exonuclease 1-like [Monodelphis domestica]
Length = 1055
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 181/518 (34%), Positives = 278/518 (53%), Gaps = 38/518 (7%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I + FS + +P PW+V EE R DLR +F+IDP
Sbjct: 421 EGEIATILVENSISVAPFSEAQMCEMPVNTPENPWKVNPEEERERIDLRKTHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDALS+ L++G +GVHIADV++FV + DIEA+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDALSVRTLNNGNLELGVHIADVTHFVTTNSYSDIEARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L+ ++ ++ W GRT+++S KL YE AQD++DG
Sbjct: 541 SILSADLCSLLGGVDRYAVSVMWELDKNSFEIKKVWYGRTILQSAYKLYYEAAQDLLDGN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
V + + + ++V +I L ++++ ++ KR + GAL LE +
Sbjct: 601 VSVVDDIPEFREMDEKSRRAKRDELVWAIGKLTDIARHVRAKRDSCGALELEGVEVRVQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I FP ALLR+HP P+ E
Sbjct: 661 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWENFPHQALLRQHPPPHQEFFSEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
G +DT S+ SL+ A + D ++ IL + AT+ M A YF +G
Sbjct: 721 RECAKAKGFSMDTRSNKTLADSLDHAND--PRDPLVNRILRSMATQAMSNAVYFSTGSCA 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
+D ++ HY LA YTHFTSP+RRY D+VVHR L AA+
Sbjct: 779 ED-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAI 815
>gi|453089671|gb|EMF17711.1| ribonuclease R [Mycosphaerella populorum SO2202]
Length = 994
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 198/570 (34%), Positives = 277/570 (48%), Gaps = 67/570 (11%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
N + + DS E V S+Q+ + + + + +PT +VV II+R+
Sbjct: 343 NDNAENEDDSGEGVVSAQERKALRDEVKRAHGKAGEGKPQPTAKVVGIIKRN-------- 394
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
W Y G KD+ K + S ++ + L P + PK+ V + D + KR
Sbjct: 395 ------WRQYVGHIDKDSVKTGAKQSRA-QQTVFLIPMDKRIPKIRVRTRQAGDLLGKR- 446
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCS 251
V ID W+ ES +P H + G +G E E A+L E +
Sbjct: 447 -----------VLVTIDSWDRESRYPVGHFVRSLGELETKGAETE----ALLLEWDVQYR 491
Query: 252 GFSPESLSCLPC------VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS 305
F L CLP VP +V R+DLR I +IDP D+DDAL ++L
Sbjct: 492 PFPKTVLDCLPAEGHDWKVPADVNDPGWRGRRDLRGELICSIDPPGCVDIDDALHAKKLP 551
Query: 306 DGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVD 365
+G VGVHIADVS+FV P A+D EA +R T+VY++ ++I MLP+LL ++ SL P V+
Sbjct: 552 NGNFEVGVHIADVSHFVKPNNAMDKEASLRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVE 611
Query: 366 RLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQL 425
R AFS+ W+L+ D+V ++VI S SYE AQ ID
Sbjct: 612 RYAFSVLWELDQNADIVSATFTKSVIASREAFSYERAQLRID------------------ 653
Query: 426 YGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGRE 484
Q + D+ + ++ L +SK L+ KR GAL L + + V E P D
Sbjct: 654 -DQSQQDDLTQGMRHLMYLSKKLRAKRMAAGALNLASPEVRVETESETSDPVDVKTKQLL 712
Query: 485 DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTS 543
D N L EEFMLLAN + A AFP +ALLRRHPAP E +K G++L
Sbjct: 713 DTNQLVEEFMLLANISVAGKNYEAFPQTALLRRHPAPPKANFEELGNQLKTKKGMELRHD 772
Query: 544 SSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFP 602
SS SL++ + + F+ L+ ATR M A YFCSG + ++ HY LA
Sbjct: 773 SSKALADSLDECVDPQEP---FFNTLVRILATRCMMSAEYFCSGT-QAYPEFRHYGLASE 828
Query: 603 VYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
+YTHFTSP+RRY DL HR L AA+E E +
Sbjct: 829 IYTHFTSPIRRYADLEAHRQLAAAIEYEPI 858
>gi|146091632|ref|XP_001470079.1| putative rrp44p homologue [Leishmania infantum JPCM5]
gi|134084873|emb|CAM69271.1| putative rrp44p homologue [Leishmania infantum JPCM5]
Length = 920
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 185/524 (35%), Positives = 268/524 (51%), Gaps = 53/524 (10%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTG+VV ++ S R G L+ G + K N S D I P +
Sbjct: 264 PTGKVVGLL--SSNRRPFCGSLD--------EGELEQVKANMS-----DNVSILFQPKNN 308
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ P++ + + + D + KRL + ID+W S FP H + V G+ G+
Sbjct: 309 RIPRIRISTRHVQDLMDKRL------------SVVIDDWPLYSSFPVGHYVEVLGKIGDR 356
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
+ + IL EN + FS CLP W V ++E R DLR+ C+ ++DP D+
Sbjct: 357 DTEAMVILLENDVPHYDFSEAVHDCLPKGQWSVAKDEEARRLDLRDLCVVSVDPLGCRDI 416
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDAL ++ VGVHIADV++F+ GTA+D EA RSTSVY++ R+I MLP LL+E
Sbjct: 417 DDALHCRVVNGNHLEVGVHIADVTHFLHEGTAMDDEAAKRSTSVYLVDRRINMLPQLLTE 476
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+ SL DR AFSI W+ + +VV W G+T+IRS L Y AQ +ID D
Sbjct: 477 NLCSLVEAEDRYAFSILWEFDENLNVVRDWFGKTIIRSRGALYYGDAQRMIDNPTDT--- 533
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
SD+ S++ L +SK K +R DGAL L + + F D E+
Sbjct: 534 ----------------SDIAVSLRELMRLSKHFKAQREKDGALFLASQEFKFKVDNEHVN 577
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFC 533
P D + + N + EE+ML AN A + ++P LLRRH P +A
Sbjct: 578 PTDMQVYQTFEANSMIEEWMLYANAAVATKVYESYPQWTLLRRHERPAEGAFDTLNDALY 637
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDT 592
K ++LD ++S ++SL++ E +D Y F+ LI TR ++ A YF SG D
Sbjct: 638 GKLHVRLDDTTSLTLNKSLDKC-EDPQDPY--FNKLIRILTTRCLRQAQYFSSGGIPKD- 693
Query: 593 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
++ H+ LA P+YTHFTSP+RRY D++VHR L AA+ E + +H
Sbjct: 694 EFYHFGLAMPIYTHFTSPIRRYADVIVHRQLAAAIGIENVSEQH 737
>gi|255085895|ref|XP_002508914.1| predicted protein [Micromonas sp. RCC299]
gi|226524192|gb|ACO70172.1| predicted protein [Micromonas sp. RCC299]
Length = 959
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 199/656 (30%), Positives = 308/656 (46%), Gaps = 112/656 (17%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV +++R+ R G +++ + + P
Sbjct: 351 PTGRVVGVVKRNWRERGYAACIDLGPGAAGAAAA----------------SRLLAVPQDR 394
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ + + A ++ +V ID W +SP+P+ H + G+ G+
Sbjct: 395 RLPK-----------IRIQTRQAAALVDQRIVVV-IDSWPADSPYPEGHYVKSLGKLGDA 442
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS----RKDLRNFCIFTIDPST 291
+ + A+L E + F+P +C+P +PW + L R+DLRN + ++DP
Sbjct: 443 DAETAAVLLEADVDDRPFAPAVHACVPPLPWSFDERTHLQAQPHREDLRNLRVCSVDPPG 502
Query: 292 ATDLDDALSIERLSD----GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
D+DDALS L D G+ +GVHIADV+ F+ P TA+D EA+ R T+ Y++QR++
Sbjct: 503 CRDIDDALSCRPLDDEGMPGMLELGVHIADVTSFLHPDTAMDDEAKRRGTTTYLVQRRLD 562
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV----VDRWIGRTVIRSCCKLSYEHAQ 403
MLP L+E++ SL GV+RL FS+F+ ++ + V+ + VI+S L+Y AQ
Sbjct: 563 MLPKPLTEDICSLRGGVERLTFSVFFRFDAKTGLPVPGVEPRFTKAVIKSAAALTYAEAQ 622
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
++D D S + ++ + ++ L+ +R GAL L +
Sbjct: 623 TMMDDPNDT-------------------SPLANDLRRINACARSLRKRRIDAGALTLASP 663
Query: 464 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
+ F D E P D + + N + EE MLLAN +AE I RAFP ALLRRHP P
Sbjct: 664 EVRFEMDKETNQPLDVGMYVTREANQMVEEMMLLANVASAERILRAFPSHALLRRHPTPA 723
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
R C G+ +D S+S + SL+ A ++ D F+ L+ ATR M A
Sbjct: 724 PRMFDPLLKACRAAGVDVDVSTSKKLADSLDAA---VRPDDQYFNTLLRIVATRCMSQAV 780
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLP 641
Y SG + D HY LA P+YTHFTSP+RRY D+VVHR LNAAL E+
Sbjct: 781 YCVSGAHSVN-DRVHYGLAAPLYTHFTSPIRRYADVVVHRLLNAALGLER---------- 829
Query: 642 KNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLA 701
A SL+ EAL + N+ + ++A
Sbjct: 830 ---------------------AHASLQDSEALKA-----------VSDNINVRHRNSQMA 857
Query: 702 CRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVE 757
R A V+L+ I +KK +EARV+ + + +++ K IE + +D+ E
Sbjct: 858 AR----ASVELHTHIFFRKKAA-ETEARVIRVRANGLIVFVPKFGIEAPVLFDDEE 908
>gi|223998142|ref|XP_002288744.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975852|gb|EED94180.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 712
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 173/525 (32%), Positives = 266/525 (50%), Gaps = 38/525 (7%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWF---NYKGGSRKDAKKNRSSLSVPD--REYI 168
+RPTG+VV II R+ ++ ++ K D + PD +
Sbjct: 132 RRPTGKVVGIIRRNFHKNYCGSLCTIDDAAADAEEKSTHPHDIIAAKHEREHPDGITSTV 191
Query: 169 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
P+ P +++ R + + + M ++ + +D W +S +P H +
Sbjct: 192 VFFSVDPRVPPILL-----------RTTQRERLVGMRILVS-MDSWPADSEYPLGHYVKT 239
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTID 288
G G + + +L E I C F + L+CLP +++ E R DLR+ + +ID
Sbjct: 240 LGVTGTKDTETQVLLQEFRIPCEPFPAKVLACLPPPDYKIELEP--GRADLRHIPVLSID 297
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P D+DDAL L +G +VGVHIADV+++V G+A+D+EA RSTS Y++ +++ M
Sbjct: 298 PPGCKDIDDALHCTELPNGNWQVGVHIADVTHYVEAGSAIDLEAANRSTSTYLVNKRLDM 357
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP LL+ ++ SL VDR AFS+ W++ D+VD +++I S L+Y+ AQ +ID
Sbjct: 358 LPSLLTTDLCSLKGNVDRFAFSVLWEVTPDADIVDVEFKKSIIHSIAALTYQQAQSLID- 416
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 468
K D + + + G ++K L +++ + +R GAL L + + F+
Sbjct: 417 KPDEDCKDDIQVG---------------AVKRLASLARKFRARRINAGALTLASPEVKFV 461
Query: 469 FD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
D E P D + N + EEFMLLAN T A+ I R +P ++LRRHPAPN
Sbjct: 462 LDSESLNPTDVQAYTLFEANAVVEEFMLLANVTVAKKILRHYPTLSILRRHPAPNRSMFD 521
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 587
+ + S + SL++A KD Y L +L +TR M A YFCSG+
Sbjct: 522 SLMRKAKTQRVSICIDDSKKLADSLDEAGRTFKDPY-LDQLLRILSTRCMSPAQYFCSGE 580
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
++ DW HY LA PVYTHFTSP+RRY D+ VHR L AA+ L
Sbjct: 581 YQ-AKDWHHYGLAAPVYTHFTSPIRRYADVCVHRLLAAAIGVSPL 624
>gi|363737633|ref|XP_003641875.1| PREDICTED: DIS3-like exonuclease 1-like [Gallus gallus]
Length = 1054
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 197/657 (29%), Positives = 325/657 (49%), Gaps = 87/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTG+VV II+++ RD +V F SR++ + + + I +TP
Sbjct: 327 PTGKVVGIIQKN-WRDYVVTF-----------PSREECQSQGR-----NAQKILVTPWDY 369
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A E +V RID W S +P H + V GR G++
Sbjct: 370 RIPK-----------IRISTQQAEALQEYRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 417
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 290
E +I AIL EN+I + FS ++ +P PW+V EE R +LR+ IF+IDP
Sbjct: 418 EGEIAAILVENSITVAPFSEIQMNEMPVSSSKNPWKVNPEEEKKRLNLRDTHLIFSIDPK 477
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDALS+ L +G +GVHIADV+YFV + DIEA+ R+T+ Y+ R+ MLP
Sbjct: 478 GCEDVDDALSVRTLPNGNLELGVHIADVTYFVAANSYTDIEARARATTYYLADRRYDMLP 537
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L +++ +++IRS KL YE AQ ++DG
Sbjct: 538 SVLSADICSLLSGVDRYAVSVLWELERESYEILRVCYNKSIIRSAYKLVYEVAQGLLDGD 597
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
V + + + + S++V +I L ++++ ++ KR + GAL LE +
Sbjct: 598 TSVVDDILELKDLDERTREKKLSELVWAISKLTDIARHIRAKRDSCGALELEGVEIRVQL 657
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I+ +FP ALLR+HP P +
Sbjct: 658 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKISESFPHQALLRQHPPPRQEFFTDL 717
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
+ S G +DT S+ +SL++A + L D ++ +L + AT+ M A YF +G
Sbjct: 718 QECASAKGFAIDTRSNKALAESLDKADDPL--DPIVNKLLRSMATQAMSNALYFSTGSCS 775
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D++VHR L AA E K +
Sbjct: 776 EE-EFHHYGLALDKYTHFTSPIRRYADIIVHRLLMAATLKETKDLKDK------------ 822
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD L ++ H N+R A ++ +
Sbjct: 823 -------LFSNKD-------------------------LEDLCKHINNRNRAAQHAQKQS 850
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +++ + ++ + +++ + I+ Y EGL++
Sbjct: 851 TELFQCMYFKDKSPETDERCIADGVIYSIRTNGVLVFVPRYGIKGAAYMKNKEGLVL 907
>gi|50289115|ref|XP_446987.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526296|emb|CAG59920.1| unnamed protein product [Candida glabrata]
Length = 1007
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 200/561 (35%), Positives = 284/561 (50%), Gaps = 78/561 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I+ RS R+ VG + N GG+
Sbjct: 394 PTGRVVGIVRRSWRQ--YVGQIAPNSVDLQNGGT-------------------------- 425
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+Y ++++ K LP I+ R ++ +V + ID W E +P H + G V
Sbjct: 426 QYVFVILMDKCLP-KIRIRTRRAKELLDKRIVVS-IDSWPETHRYPLGHFVRDLGGIETV 483
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE-----------LLSRKDLRNF 282
+ + A+L E+ + FS + L CLP W+ P++ L R+DLR+
Sbjct: 484 QAETEALLLEHDVEYRPFSKKVLDCLPSEGHDWKAPEKLSDSAAIAKDPLLPKRRDLRDK 543
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
I +IDP D+DDAL + L +G VGVHIADV++FV PGTALD E R TSVY++
Sbjct: 544 LICSIDPPNCVDIDDALHAKMLENGNWEVGVHIADVTHFVKPGTALDAEGASRGTSVYLV 603
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
++I MLP+LL ++ SL P VDR AFS+ W+L+ ++V+ ++VIRS SYE A
Sbjct: 604 DKRIDMLPMLLGTDLCSLKPYVDRFAFSVLWELDQDANIVNVDFTKSVIRSREAFSYEQA 663
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
Q ID D ++ L +G +++L ++SK LK KR GAL L +
Sbjct: 664 QIRID---DPNQTDELTQG----------------MRALLQLSKKLKQKRLDAGALNLAS 704
Query: 463 SK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
+ V + E P + + N L EEFMLLAN + A I +FP +A+LRRH AP
Sbjct: 705 PEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDSFPQTAMLRRHAAP 764
Query: 522 ---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 577
N L E +K GL + SS SL++ +K D Y F+ L+ +TR M
Sbjct: 765 PSTNFEILNEM--LQTKKGLTISLESSKALADSLDRCVDK-NDPY--FNTLVRIMSTRCM 819
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
A YF SG + +D+ HY LA +YTHFTSP+RRY D+V HR L AA+ E L HR
Sbjct: 820 MAAQYFYSGAYS-YSDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAAAIGYEPLSLTHR 878
Query: 638 -----RMLPKNNHREGVRGRF 653
M+ KN +R+ +F
Sbjct: 879 DKTKMDMICKNINRKHRNAQF 899
>gi|157871524|ref|XP_001684311.1| putative rrp44p homologue [Leishmania major strain Friedlin]
gi|68127380|emb|CAJ04861.1| putative rrp44p homologue [Leishmania major strain Friedlin]
Length = 920
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 186/524 (35%), Positives = 269/524 (51%), Gaps = 53/524 (10%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTG+VV ++ S R G L+ G + K N S D I P +
Sbjct: 264 PTGKVVGLL--SSNRRPFCGSLD--------EGELEQVKANMS-----DNVSILFQPKNN 308
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ P++ + + + D + KRL + ID+W S FP H + V G+ G+
Sbjct: 309 RIPRIRISTRHVQDLMDKRL------------SVVIDDWPLYSSFPVGHYVEVLGKIGDR 356
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
+ + IL E+ + FS CLP W V ++E R DLR+ CI ++DP D+
Sbjct: 357 DTEAMVILLEHDVPHYDFSEAVHDCLPKGQWSVTKDEEARRLDLRDLCIVSVDPLGCRDI 416
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDAL ++ VGVHIADV++F+ GTA+D EA RSTSVY++ R+I MLP LL+E
Sbjct: 417 DDALHCRVVNGNHLEVGVHIADVTHFLHEGTAMDDEAAKRSTSVYLVDRRINMLPQLLTE 476
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+ SL DR AFSI W+ + +VV W G+T+IRS L Y AQ +ID D
Sbjct: 477 NLCSLVEAEDRYAFSILWEFDENLNVVRDWFGKTIIRSRGALYYGDAQRMIDNPADT--- 533
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
SD+ S++ L +SK K +R DGAL L + + F D E+
Sbjct: 534 ----------------SDIAVSLRELMRLSKHFKAQREEDGALFLASQEFKFKVDNEHVN 577
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFC 533
P D + + N + EE+ML AN A + ++P LLRRH P +A
Sbjct: 578 PTDMQVYQTFEANSMIEEWMLYANAAVATKVYESYPQWTLLRRHEPPAEGAFDTLNDALY 637
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDT 592
SK ++LD ++S ++SL++ E +D Y F+ LI TR ++ A YF SG D
Sbjct: 638 SKLRVRLDDTTSLTLNKSLDKC-EDPQDPY--FNKLIRILTTRCLRQAQYFSSGGIPKD- 693
Query: 593 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
++ H+ LA P+YTHFTSP+RRY D++VHR L AA+ E + +H
Sbjct: 694 EFYHFGLAMPIYTHFTSPIRRYADVLVHRQLAAAIGIESISEQH 737
>gi|145488516|ref|XP_001430262.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397358|emb|CAK62864.1| unnamed protein product [Paramecium tetraurelia]
Length = 1184
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 185/553 (33%), Positives = 284/553 (51%), Gaps = 65/553 (11%)
Query: 208 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE 267
+A+ W + S +P ++ G G ++ + AIL EN++ + FS + +
Sbjct: 615 SAKYISWAKNSRYPYVELIKEVGVQGNIDVECEAILTENSVYDNEFSEQCKEEMKAFTHN 674
Query: 268 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 327
+E +R DLR I +IDP TA DLDDALSI L +GI +GVHIADVS+FVLP +
Sbjct: 675 SIAKERENRMDLRKEYICSIDPVTARDLDDALSINDLGNGIYEIGVHIADVSHFVLPNSE 734
Query: 328 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW-- 385
+D EA +R+TSVY++ + IPMLP +L EE+ SLN V+RLAFS+F+ + S G+V+ W
Sbjct: 735 VDKEAILRTTSVYLVHKVIPMLPRILCEELCSLNRDVERLAFSVFFKMTSEGEVL--WDS 792
Query: 386 --IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
++VI+SC +LSY+ +IDG+ S GE ++ F+ + + L
Sbjct: 793 FRAAKSVIKSCAQLSYDIVNQLIDGEIQQFSQ---GEARYKVAEGFDEIVLKDKVLLLNT 849
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+++ ++KR +G+L E SK FL + P R F+ EE+MLLAN+ +
Sbjct: 850 IAQKRREKRL-EGSLTFEKSKLRFLLNSDLFPTGYTEEKRGLAQFMVEEWMLLANQFVGK 908
Query: 504 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ-----LDTSSSGQFHQSLEQAREK 558
+ +A+LR+H +P KL + GL+ LD S+S ++ + E
Sbjct: 909 KLIEYDTKTAVLRQHISPKSEKLDYYRKLLEACGLEEMAQNLDVSTSRNLKLTMNKVNEI 968
Query: 559 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
++ L IL + M+ A YF D +T+W HYAL F VYTHFTSP+RRYPD++
Sbjct: 969 ESEEIKL--ILGFRLLKLMEAAQYFVV-DETPETEWRHYALDFDVYTHFTSPIRRYPDIL 1025
Query: 619 VHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAAL 678
VHR L ALE +++ DK E R+ L
Sbjct: 1026 VHRRLQIALEQQEI---------------------------DKTG----ETRDKLKA--- 1051
Query: 679 KYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFM 738
+ HCND +L R V D C +L++ +LLK V + + +L+L + +
Sbjct: 1052 ------------IMQHCNDCRLNARRVSDQCDQLFLALLLKANPVEV-DGYILSLNRQQI 1098
Query: 739 TIYIEKLAIERRI 751
+ I K +ER++
Sbjct: 1099 EVIIPKYNLERKV 1111
>gi|340724044|ref|XP_003400395.1| PREDICTED: DIS3-like exonuclease 2-like [Bombus terrestris]
Length = 784
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 173/559 (30%), Positives = 283/559 (50%), Gaps = 73/559 (13%)
Query: 220 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 279
F + + G G+++ + NAIL+E + + +S LP + + + ++ R+D
Sbjct: 230 FAVGKIEKIIGNIGDIKAESNAILFEYDLDVTPYSLHVTKELPSSDYSLTENDIKDREDW 289
Query: 280 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 339
++ CIFTIDP TA DLDD++S + L +G +GVHI+DV++++ + LDI+ R+T++
Sbjct: 290 KDECIFTIDPDTAVDLDDSVSCKPLENGNYEIGVHISDVTHYLKFLSPLDIQVSKRATTI 349
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 399
YM MLP L +V SL+PG D+LAFS+ W++ VV +TVIRSCC++SY
Sbjct: 350 YMADNTYHMLPKELC-QVCSLSPGQDKLAFSVIWEMTQDAKVVKHRFAKTVIRSCCQMSY 408
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLY----GQFEWSDVVRSIKSLYEVSKILKDKRFTD 455
+H Q +I+ WP Y G ++ +D+ + L+ ++ ++ +RF +
Sbjct: 409 QHVQKMIENP---------EYNWPDNYIYIDGNYKLNDLSIKVNILHNLAIQMRKRRFQN 459
Query: 456 GALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSAL 514
GAL+++ K D G P + ++D N L EEFMLLAN T A+ + P++AL
Sbjct: 460 GALQIDLPKLYVRVDRITGLPISYNIEEQQDSNRLIEEFMLLANMTVAKHLYNVIPETAL 519
Query: 515 LRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDD-------YVL 565
LR H P+ L + K G+ LD +SS H S+++ E L +DD Y +
Sbjct: 520 LRIHTEPSKHILSTTQDMLQKFGIHLDITSSTSLHASMKRYEEGLETEDDERRKIMKYRM 579
Query: 566 FDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 625
++ N +R M A+Y CS + + HYAL P+YTHFTSP+RRY D VVHR L +
Sbjct: 580 M-VINNLCSRAMARATYICSSTVEAQEELRHYALNIPLYTHFTSPIRRYSDCVVHRLLYS 638
Query: 626 ALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCA 685
L I K+ + L C
Sbjct: 639 TLR---------------------------NIDMPKEWTQKL----------------CK 655
Query: 686 DILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKL 745
I A +CN +K + ++ +LY L+ K +++ VL++ F+TI +L
Sbjct: 656 SI----AANCNIKKFNAKMAQERSNELYFMYLIDLKGPIVTMGIVLSVHENFITIISCQL 711
Query: 746 AIERRIYYDEVEGL-IVEW 763
I+ ++++ ++E L +VE+
Sbjct: 712 GIKLKVFFTQLENLALVEY 730
>gi|407926199|gb|EKG19168.1| Ribonuclease II/R [Macrophomina phaseolina MS6]
Length = 1041
Score = 271 bits (694), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 188/531 (35%), Positives = 264/531 (49%), Gaps = 67/531 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV I++R+ W Y G +D+ K+ + S ++ + L P
Sbjct: 434 QPTARVVGIVKRN--------------WRQYVGHVDRDSVKSTAKQS-RTQQTVFLIPMD 478
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK+ V + + + KR + ID WN ES +P H + G
Sbjct: 479 KRIPKIRVRTRQAGEMLGKR------------ILVTIDSWNRESRYPMGHFVRSLGELES 526
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCI 284
+G E E A+L E + F L CLP W VP+ + R+DLR+ +
Sbjct: 527 KGAETE----ALLLEYDVQYRPFPKAVLDCLPPEGHDWRVPESKDDPGWKGRRDLRDLLV 582
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL + L +G +VGVHIADVS+FV P A+D EA +R T+VY++ +
Sbjct: 583 CSIDPPGCVDIDDALHAQPLPNGNFQVGVHIADVSHFVKPNNAMDKEASMRGTTVYLVDK 642
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP+LL ++ SL P V+R AFS+ W++ ++V ++VIRS SYE AQ
Sbjct: 643 RIDMLPMLLGTDLCSLKPYVERYAFSVLWEITPDAEIVSADFSKSVIRSREAFSYEQAQL 702
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
ID Q + ++ + +++L +SK L+ KR+ GAL L + +
Sbjct: 703 RID-------------------DQSQQDELTQGMRTLLMLSKKLRQKRYDAGALNLASPE 743
Query: 465 -PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
V E P D D N L EEFMLLAN T A AFP +ALLRRH AP
Sbjct: 744 VKVQTESETSDPIDVQTKRLLDTNSLVEEFMLLANITVARKNYEAFPQTALLRRHAAPPK 803
Query: 524 RKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
E K GL+L SS SL+ L + F+ L+ ATR M A
Sbjct: 804 NNFEELANQLKVKKGLELRVDSSKALADSLDTC---LDPNEPFFNTLVRIMATRCMMSAE 860
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
YFC+G + ++ HY LA +YTHFTSP+RRY DL HR L AA+E E L
Sbjct: 861 YFCAGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLEAHRQLAAAIEYEPL 910
>gi|291402815|ref|XP_002718229.1| PREDICTED: DIS3-like exonuclease 1-like [Oryctolagus cuniculus]
Length = 1023
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 183/535 (34%), Positives = 277/535 (51%), Gaps = 39/535 (7%)
Query: 103 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSV 162
R+ A Y PTG VV I ++ +RD IV F + Y ++K + L+V
Sbjct: 302 RMGADHEGYSEYVPTGHVVGITQKH-KRDYIVTFPSKEDILYY-------SRKTKKYLAV 353
Query: 163 PDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQ 222
P +Y + P++ + K ++ + A I ID W+ +S +P
Sbjct: 354 P-WDY--------RIPRIRISRKQ-----AEKYQFCRAIIH-------IDSWDTDSRYPD 392
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKD 278
HV+ G GG++E ++ ++L E+ I FS + LP PW V EE RKD
Sbjct: 393 GHVVGTLGTGGDLEGEMKSLLMEHDISERPFSEAQMGELPVNTAEKPWSVDHEEQ-DRKD 451
Query: 279 LR-NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 337
LR +FTIDP D+DDALS+ LS G +GVHIADV+YFV P + LD EA+ R+T
Sbjct: 452 LRKTHLVFTIDPKGCEDVDDALSVRTLSSGNLELGVHIADVTYFVKPKSHLDKEARARAT 511
Query: 338 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCK 396
+ Y+ R+ MLP +LS + SL GVDR A S+ W+L+ + ++ W GR++I S +
Sbjct: 512 TYYLPDRRYDMLPSVLSSNLCSLLRGVDRYAMSVIWELDMTTYEIKKVWYGRSIIHSTYQ 571
Query: 397 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 456
LSYE AQ+++DG + + + + + ++ +I+ L +++ + +R DG
Sbjct: 572 LSYEAAQELLDGNLSITGNIEEFQDMEEKEKEDRLQELTWAIEKLADIASHFRAQRGLDG 631
Query: 457 ALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 516
AL L+ + L DE D V + ++ + E M+LAN A I +FP ALLR
Sbjct: 632 ALDLDGIEISVLLDEEKNILDLVPRQQRRIHRMVAECMILANHWVARKIYESFPRQALLR 691
Query: 517 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 576
RHP P E + G +DTSS+ SL+ A + D ++ +L N AT
Sbjct: 692 RHPPPRQNLFSELKQSAKAGGFHIDTSSNRALALSLDNAYD--VSDPMVNKLLRNMATLA 749
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
M A YF +G + + ++ HY L YTHFTSP+RRY D++VHR L AA+ +K
Sbjct: 750 MSNALYFSTGSCR-EREFHHYGLGLDKYTHFTSPIRRYADIIVHRLLIAAIAEDK 803
>gi|443726110|gb|ELU13403.1| hypothetical protein CAPTEDRAFT_108980 [Capitella teleta]
Length = 998
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 175/526 (33%), Positives = 270/526 (51%), Gaps = 53/526 (10%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV +++R +W +Y D +K R + + P
Sbjct: 324 PTGRVVGVLQR--------------RWRDYVASFEVDNQKRRVG-------KVLVVPMDW 362
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ + +A + + R+D W S +P H + G G+V
Sbjct: 363 RIPK-----------IRISTTQAEA-LRSHRIIVRLDNWEVGSQYPNGHFVRSLGPAGQV 410
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I+AIL E+ + F+ +S +P PW + + E+ +R+DLR + +F+IDP
Sbjct: 411 ETEISAILIEHNLQVPPFADGLMSEMPVNTDSNPWVMAESEVKTRRDLRQSHLVFSIDPK 470
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDALSI LS+G +GVHIADV++FV + D+EA+ R+T+VY+ R+ MLP
Sbjct: 471 GCEDVDDALSIRHLSNGKMELGVHIADVTHFVAANSLTDLEAKQRATTVYLADRRYDMLP 530
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 410
+LS ++ SL GVDR A S+ W L+ V+D W GRTVI S KL YE AQ I DG
Sbjct: 531 AVLSADLCSLLSGVDRYAVSVIWTLDQDCQVLDVWYGRTVIHSSYKLFYEMAQSIHDGAA 590
Query: 411 DVESSNTLGEGWPQL-----YGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
D E + E P+L + + + S++ ++ SL ++ ++ +R GAL+LE +
Sbjct: 591 DEE----IIENVPELQNNPDHLKKKISELRSAVNSLMSTARKIQARRTRQGALQLEGVEV 646
Query: 466 VFLFDEYGTPY---DSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
D+ D + +++ E M+ AN A+ I +P+ ALLR HP P
Sbjct: 647 QVQIDKTSAQQNITDVIPKEALEIHETIAECMIFANHWVAKKICETYPNQALLRHHPLPR 706
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
++ S G ++T+ + +SL+ R + D +L + AT+ M ASY
Sbjct: 707 QEDFGRLQSCASVRGFSINTTDNKTLAESLD--RCVIDGDATFNKLLRSLATQAMSNASY 764
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
F +G D + HY LA P YTHFTSP+RRY D++VHR L AA++
Sbjct: 765 FSTGALARD-QFFHYGLALPYYTHFTSPIRRYADILVHRQLLAAVK 809
>gi|392563157|gb|EIW56336.1| RNB-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 990
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 188/536 (35%), Positives = 270/536 (50%), Gaps = 69/536 (12%)
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVPDREYIQL 170
+K+PTGRVV I++R+ W +Y S N +SLS ++ +
Sbjct: 372 SKQPTGRVVGIVKRN--------------WRSYVCHIDSTSLTSTNPTSLS---QQTVFA 414
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
TP P++ + + P I ++ + ID W S +P+ H + G
Sbjct: 415 TPVSRLLPRIRLRTRQAPALIGQK------------ILVTIDRWERTSRYPEGHFVRALG 462
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLS-----RKDLRNFC 283
+ E + ++L E + F L CLP W VP + R+DLR+
Sbjct: 463 KVQSKEAEQESLLLEFDVPYRPFGKAILDCLPPEGDSWVVPPKAAADPNWRDREDLRDLI 522
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
I +IDP D+DDAL RL +G GVHIADVS+FVLP T +D EA R T+VY++
Sbjct: 523 ICSIDPPGCQDIDDALHARRLPNGNIEAGVHIADVSHFVLPDTPMDNEAAARGTTVYLVD 582
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
++I MLP LL + SL P V+RLAFS+ W+L+ A ++V+ ++VI S +YE AQ
Sbjct: 583 KRIDMLPALLGTNLCSLRPHVERLAFSVIWELSPAAEIVNVRFTKSVIASKSAFTYEEAQ 642
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
D D + ++ L E SI+ L ++S+ L+ R GAL L +
Sbjct: 643 IRKD---DPKQTDELTE----------------SIRLLNDLSRKLRQGRMDAGALNLASP 683
Query: 464 KPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH--- 518
+ D E P D + + N L EEFMLLAN + A I FP +A+LRRH
Sbjct: 684 EVKIHLDSSESSDPIDVEQKEQRETNSLVEEFMLLANISVAGKIQETFPQTAVLRRHLPP 743
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 577
P N KL++ + G+ LD SSSG SL++ + + F+ L+ ATR M
Sbjct: 744 PRTNFEKLQDI--LKKRRGMSLDVSSSGALAASLDECVDPTEP---AFNTLVRIMATRCM 798
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
A YFCSG DT +GHY LA P+YTHFTSP+RRY D++ HR L+AA+ L+
Sbjct: 799 LSAEYFCSGSVGRDT-FGHYGLASPIYTHFTSPIRRYADVLAHRQLSAAIGYTSLH 853
>gi|449270661|gb|EMC81320.1| DIS3-like exonuclease 1, partial [Columba livia]
Length = 1008
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 192/657 (29%), Positives = 315/657 (47%), Gaps = 86/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTG+VV II+++ RD +V F K S + + + +TP
Sbjct: 283 PTGKVVGIIQKN-WRDYVVTF----------------PSKEESQSQGRNAQKVLVTPWDY 325
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + +V RID W S +P H + V G+ G++
Sbjct: 326 RIPK-----------IRISTQQAEALQDYRVVV-RIDSWESTSVYPNGHFVRVLGKIGDL 373
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 290
E ++ AIL EN+IC + FS +S +P PW+V EE R DLR+ IF+IDP
Sbjct: 374 EGEVAAILVENSICVAPFSEIQMSEMPVSSSKNPWKVNPEEEKKRLDLRDTHLIFSIDPK 433
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDALS+ L G +GVHIADV+ FV + D+EA+ R+T+ Y+ R+ MLP
Sbjct: 434 GCEDVDDALSVRSLPSGNLELGVHIADVTQFVAANSYTDVEARARATTYYLADRRYDMLP 493
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL G+DR A S+ W+L +V+ +T+IRS KL+YE AQ ++DG
Sbjct: 494 SVLSADICSLLSGLDRYAVSVLWELEKESYEVLRVCYNKTIIRSAYKLAYETAQGLLDGD 553
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
+ + + + +++V +I L ++++ ++ KR + GAL LE +
Sbjct: 554 TSAVGDIPELKNLDERTREKKLAELVWAISKLTDIARHVRAKRDSCGALELEGVEIRVQL 613
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I+ FP ALLR+HP P E
Sbjct: 614 DDQHNIHDLIPKQPLEVHETVAECMILANHWVAKKISENFPHQALLRQHPPPRQEFFTEL 673
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
S G +DT S+ +SL +A + D ++ +L + AT M A YF +G
Sbjct: 674 RECASSKGFSIDTRSNKTLAESLNKAHD--PQDPIVNKLLRSMATHAMSNALYFSTGSCP 731
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA +
Sbjct: 732 EE-EFHHYGLALEKYTHFTSPIRRYADIVVHRLLMAATLKDS------------------ 772
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+G +F +KD E + H N+R A ++ +
Sbjct: 773 KGDIKENVFSNKDLEE-------------------------LCRHINNRNRAAQHAEKQS 807
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K + +++ + ++ + +++ + I+ Y EGL++
Sbjct: 808 TELFQCMYFKDKTPETDQRCIADGVIYSIRTNGVLVFVPRYGIKAAAYMKNKEGLVI 864
>gi|157871546|ref|XP_001684322.1| putative ribonuclease II-like protein [Leishmania major strain
Friedlin]
gi|68127391|emb|CAJ04970.1| putative ribonuclease II-like protein [Leishmania major strain
Friedlin]
Length = 942
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 218/655 (33%), Positives = 325/655 (49%), Gaps = 91/655 (13%)
Query: 109 SSY---PTKRPTGRVVSIIERS-PRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD 164
SSY P KRP GRV+ I++R PR V + NQ G R + +
Sbjct: 149 SSYEWPPEKRPLGRVIRILKRCLPRLH--VARIADNQ---VSPGER-----------LQE 192
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEME-------LVAARIDEWNEE 217
+ Y + P + YP++ V D+ + + ++ +E L R+
Sbjct: 193 KYYYRFRPFNQLYPQLTVQGCDIMAAYHANISTSLFSLALEHRENGEILTTPRV------ 246
Query: 218 SPFPQAHVLHVFGRGGEVEPQINAILYENAICCS------GFSPESLSCLPCVPWEVPQE 271
P A + V G+ A +AIC S FS E+ +C+P + +P
Sbjct: 247 ---PNALLCKVHSFLGDASTMAVA---SHAICTSCNVSTEPFSEEAEACVP-KDFTIPSA 299
Query: 272 ELLS---RKDLRNF-CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 327
L+ R+DLR+ + TIDP+TA DLDDALSI+ DG VGVHIADVS+FVLP TA
Sbjct: 300 AELADMGRRDLRDSEFVLTIDPATARDLDDALSIKPRKDGGYHVGVHIADVSHFVLPRTA 359
Query: 328 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD---- 383
LD EAQ RS S Y++ R IPMLP LSEE SLNPG D+ AFS ++ + G ++
Sbjct: 360 LDEEAQRRSNSTYLVDRVIPMLPSRLSEEYCSLNPGEDKFAFSGLFEFDRDGHLISEAAT 419
Query: 384 ----RWIGRTVIRSCCKLSYEHAQDIIDGK----FDV-ESSNTLGEGWPQLYGQFEWSDV 434
W G++VIRS C+L+YE AQ I+DG DV ++++ LG G + V
Sbjct: 420 EEKCEWFGQSVIRSRCRLAYEQAQQILDGDDTVVLDVAQAASDLGIG-----EEAARKKV 474
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGRE-DLNFLFE 491
+S+ +L+ ++ L+ + DG + + +++ F FD E +P S + N+L E
Sbjct: 475 KQSVTNLFTLASKLRQQSLRDGRVVIGSTRLAFRFDRNEVNSPPTSFFVQEQIQANWLVE 534
Query: 492 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 551
EFMLLAN+ A+ I + P ALLRRH P+ +K+R S GL SS + Q
Sbjct: 535 EFMLLANQRVAQKIVQFIPYGALLRRHKPPHPQKMRRLRTALSHRGLPTGGSSGQELQQV 594
Query: 552 LEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 611
+E ++ ++D+ L+ Y+ +A+ + + D + H+A+A P YTHFTSP+
Sbjct: 595 IETIKKDHREDFHTVCELLKYSL----MAAEYIANDPTEKDIRSHFAVAAPWYTHFTSPI 650
Query: 612 RRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAE--SLEG 669
RRY DL+VHR L ALE E+ + + +P H + R IF A + L+
Sbjct: 651 RRYCDLMVHRQLRVALELERCMEEAQMEMPHTPH-PALETRPGDCIFDPTRAVDVNKLKT 709
Query: 670 REALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVK----LYMWILLKK 720
RE + L ++ TH N +L R+ D ++ LY+ L K+
Sbjct: 710 RELFYPHS---------ALEHIVTHANGCRLNSRSAGDMSLEYSLCLYLLALQKR 755
>gi|45190576|ref|NP_984830.1| AEL031Cp [Ashbya gossypii ATCC 10895]
gi|44983518|gb|AAS52654.1| AEL031Cp [Ashbya gossypii ATCC 10895]
Length = 997
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 199/562 (35%), Positives = 282/562 (50%), Gaps = 78/562 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV+I RS W Y G + + L +
Sbjct: 384 QPTARVVAITRRS--------------WRQYVGQIATNT--------------LDLQDSS 415
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ ++++ K LP I+ R + +V A ID W +P H + G
Sbjct: 416 TQNVFVILMDKCLP-KIRIRTRRAKELLNKRIVVA-IDSWPATYKYPLGHFVRELGEVES 473
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLS-------RKDLRN 281
VE + A+L E+ + FS + L CLP P ++ E +S R+DLR+
Sbjct: 474 VEAETEALLLEHDVEYRPFSKKVLECLPAEGHDWRAPADLSDPEAISKDPLLPKRRDLRD 533
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL +RL +G VGVHIADV++FV PGTALD E R+TSVY+
Sbjct: 534 KLICSIDPPGCVDIDDALHAKRLPNGNWEVGVHIADVTHFVKPGTALDTEGASRATSVYL 593
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ ++I MLP+LL ++ SL P VDR AFS+ W+L++ ++V+ ++VIRS SYE
Sbjct: 594 VNKRIDMLPMLLGTDLCSLKPYVDRFAFSVLWELDADANIVNVDFTKSVIRSREAFSYEA 653
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ ID DV ++ L G +++L E+SK LK KR GAL L
Sbjct: 654 AQLRID---DVNQNDELTNG----------------MRALLELSKKLKQKRLDAGALNLA 694
Query: 462 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
+ + V + +E P + + N L EEFMLLAN + A I AFP +A+LRRH A
Sbjct: 695 SPEVKVHMDNETSDPNEVEIKKLLATNSLVEEFMLLANISVARKINDAFPQTAMLRRHAA 754
Query: 521 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 576
P N L E K + L++S + SL++ + +D Y F+ L+ +TR
Sbjct: 755 PPSTNFEALNEMLQVRKKMAISLESSKA--LADSLDRCIDP-EDPY--FNTLVRIMSTRC 809
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
M A YF SG F +D+ HY LA +YTHFTSP+RRY D+VVHR L A+ E L H
Sbjct: 810 MMAAQYFYSGAFS-YSDFHHYGLAVDIYTHFTSPIRRYCDVVVHRQLAGAIGYEPLDLTH 868
Query: 637 R-----RMLPKNNHREGVRGRF 653
R M+ KN +R +F
Sbjct: 869 RDKQKMEMICKNINRRHRNAQF 890
>gi|312379668|gb|EFR25868.1| hypothetical protein AND_08402 [Anopheles darlingi]
Length = 991
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/435 (38%), Positives = 237/435 (54%), Gaps = 28/435 (6%)
Query: 200 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 259
AT+ + + ID+W S +PQ H + G G E + IL E+ + + FS E L+
Sbjct: 386 ATLLSQRIIVAIDQWPRHSRYPQGHFVRALGPIGSKETENEVILLEHDVPHNRFSEEVLA 445
Query: 260 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 319
CLP +PW + E+L R DLR+ I ++DP TD+DDAL RL +G VGVHIADVS
Sbjct: 446 CLPQLPWTITPEDLKRRVDLRDITICSVDPPGCTDIDDALHARRLPNGNIEVGVHIADVS 505
Query: 320 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 379
+F+ P ALD EA R+T+VY++ ++I M+P LLS + SL G +R AFS W+L+
Sbjct: 506 HFIRPCNALDREAASRATTVYLVDKRIDMVPELLSSNLCSLRGGEERFAFSCVWELDDEA 565
Query: 380 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 439
+V+ ++VI+S L+ IID + S T +DV S++
Sbjct: 566 NVLHVKFHKSVIKSKEALTL-----IIDDR-----SQT--------------NDVAVSLR 601
Query: 440 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 498
L ++KILK +R +GAL L + + F D E P D D N + EEFMLLAN
Sbjct: 602 LLNRLAKILKRRRTENGALVLASPEIRFHVDSETHDPIDVKAKQLLDTNSMVEEFMLLAN 661
Query: 499 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
+ AE I FP+ A+LRRHP P G ++ T++ + SL++A
Sbjct: 662 VSVAEKIESEFPECAMLRRHPQPPQTNFEPLVKAAQHQGFKIITATGKELATSLDEAVNP 721
Query: 559 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
+ L +L ATR M A YF SG + + ++ HY LA P+YTHFTSP+RRY D++
Sbjct: 722 A--NPYLNTMLRILATRCMMQAVYFISGTLQRE-EFFHYGLAAPIYTHFTSPIRRYADVI 778
Query: 619 VHRTLNAALEAEKLY 633
VHR L A + A+ Y
Sbjct: 779 VHRLLAACIGADSTY 793
>gi|374108052|gb|AEY96959.1| FAEL031Cp [Ashbya gossypii FDAG1]
Length = 997
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 199/562 (35%), Positives = 282/562 (50%), Gaps = 78/562 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV+I RS W Y G + + L +
Sbjct: 384 QPTARVVAITRRS--------------WRQYVGQIATNT--------------LDLQDSS 415
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ ++++ K LP I+ R + +V A ID W +P H + G
Sbjct: 416 TQNVFVILMDKCLP-KIRIRTRRAKELLNKRIVVA-IDSWPATYKYPLGHFVRELGEVES 473
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLS-------RKDLRN 281
VE + A+L E+ + FS + L CLP P ++ E +S R+DLR+
Sbjct: 474 VEAETEALLLEHDVEYRPFSKKVLECLPAEGHDWRAPADLSDPEAISKDPLLPKRRDLRD 533
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL +RL +G VGVHIADV++FV PGTALD E R+TSVY+
Sbjct: 534 KLICSIDPPGCVDIDDALHAKRLPNGNWEVGVHIADVTHFVKPGTALDTEGASRATSVYL 593
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ ++I MLP+LL ++ SL P VDR AFS+ W+L++ ++V+ ++VIRS SYE
Sbjct: 594 VNKRIDMLPMLLGTDLCSLKPYVDRFAFSVLWELDADANIVNVDFTKSVIRSREAFSYEA 653
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ ID DV ++ L G +++L E+SK LK KR GAL L
Sbjct: 654 AQLRID---DVNQNDELTNG----------------MRALLELSKKLKQKRLDAGALNLA 694
Query: 462 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
+ + V + +E P + + N L EEFMLLAN + A I AFP +A+LRRH A
Sbjct: 695 SPEVKVHMDNETSDPNEVEIKKLLATNSLVEEFMLLANISVARKINDAFPQTAMLRRHAA 754
Query: 521 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 576
P N L E K + L++S + SL++ + +D Y F+ L+ +TR
Sbjct: 755 PPSTNFEALNEMLQVRKKMAISLESSKA--LADSLDRCIDP-EDPY--FNTLVRIMSTRC 809
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
M A YF SG F +D+ HY LA +YTHFTSP+RRY D+VVHR L A+ E L H
Sbjct: 810 MMAAQYFYSGAFS-YSDFHHYGLAVDIYTHFTSPIRRYCDVVVHRQLAGAIGYEPLDLTH 868
Query: 637 R-----RMLPKNNHREGVRGRF 653
R M+ KN +R +F
Sbjct: 869 RDKQKMEMICKNINRRHRNAQF 890
>gi|441669080|ref|XP_003274819.2| PREDICTED: DIS3-like exonuclease 2 [Nomascus leucogenys]
Length = 448
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/406 (38%), Positives = 216/406 (53%), Gaps = 53/406 (13%)
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 407
MLP LL EE+ SLNP D+L FS+ W L G ++D W GRTVIRSC KLSYEHAQ +I+
Sbjct: 1 MLPRLLCEELCSLNPMSDKLTFSVIWTLTPEGKILDEWFGRTVIRSCTKLSYEHAQSMIE 60
Query: 408 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
+ + L P + + +V +++ +L+ ++K L+ +RF DGALRL+ K F
Sbjct: 61 SPNEKIPAKEL----PPISPEHSSEEVHQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAF 116
Query: 468 LFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
D E G P + D N L EEFMLLAN A I RAFP+ ALLRRHP P R L
Sbjct: 117 TLDHETGLPQGCHIYEYRDSNKLVEEFMLLANMAVAHKIHRAFPEQALLRRHPPPQTRML 176
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 586
+ FC + GL +D SS+G ++SL Q K ++L N +RPMQ+A YFCSG
Sbjct: 177 NDLVEFCDQMGLPVDFSSAGALNKSLTQTFGDDKYSLARKEVLTNMCSRPMQMALYFCSG 236
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 646
+D + HYAL P+YTHFTSP+RR+ D++VHR L AAL
Sbjct: 237 LLRDPAQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAAL------------------- 277
Query: 647 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 706
G R R D A D L A HCNDR++A + V+
Sbjct: 278 -GYRERL--------DMA--------------------PDTLQKQADHCNDRRMASKRVQ 308
Query: 707 DACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
+ L+ +L+K+ L SEA V+ + + + + + +++RIY
Sbjct: 309 ELSTSLFFAVLVKESGPLESEAMVMGVLNQAFDVLVLRYGVQKRIY 354
>gi|383860552|ref|XP_003705753.1| PREDICTED: exosome complex exonuclease RRP44-like [Megachile
rotundata]
Length = 979
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 266/527 (50%), Gaps = 59/527 (11%)
Query: 109 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 168
SS K PTG++V II R+ R+ + + Q N +G R
Sbjct: 326 SSKMQKTPTGKIVGIIRRNWRQ-----YCGILQPSNIEGNVRH----------------- 363
Query: 169 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
P K PK+ + + K+R+ +VA ID W S +P H +
Sbjct: 364 LFVPAERKIPKIRIETRQYTVLSKQRI----------IVA--IDSWPRNSRYPLGHFVRA 411
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTID 288
G G+ + IL E+ + S FS LS LP +PW + ++ R+DLR+ I ++D
Sbjct: 412 LGAIGDKATENEVILLEHDVPHSRFSDAVLSSLPKMPWSITDGDIEQREDLRHLDICSVD 471
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P TD+DDAL +L +G VGVHIADV++F+ PGTALD EA +R+T+VY++ +I M
Sbjct: 472 PPGCTDIDDALHCRKLPNGNFEVGVHIADVTHFIRPGTALDKEAALRATTVYLVDTRIQM 531
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
+P LLS + SL V+RLAFS W+L+ +V++ ++VI S ++Y+ AQ ID
Sbjct: 532 IPELLSTNLCSLRGNVERLAFSCIWELDKDANVINTRYCKSVICSRAAMTYDEAQLKIDD 591
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 468
+S + S+++L ++K LK +R +GAL L + + F
Sbjct: 592 ASQQDS-------------------IAISLRNLNSLAKKLKKRRLENGALVLASPEIRFQ 632
Query: 469 FD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
D E P D + N + EEFMLLAN + A I FP+ A+LRRHP P
Sbjct: 633 VDSETHDPIDVEAKKLRETNSMVEEFMLLANISVANKIVEEFPECAVLRRHPEPPPANFE 692
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 586
G ++T++ + +SL++ K D F+ ++ ATR M A YF SG
Sbjct: 693 PLIKAGKNQGFIINTNTGKELAESLDKCH---KADNPYFNTMLRILATRCMMQAVYFISG 749
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
+++ HY LA P+YTHFTSP+RRY D++VHR L + A+ Y
Sbjct: 750 -MHQPSEYFHYGLACPIYTHFTSPIRRYADIMVHRLLAVCIGADATY 795
>gi|198462657|ref|XP_001352503.2| GA14227 [Drosophila pseudoobscura pseudoobscura]
gi|198150922|gb|EAL30000.2| GA14227 [Drosophila pseudoobscura pseudoobscura]
Length = 1112
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/411 (38%), Positives = 228/411 (55%), Gaps = 13/411 (3%)
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP---QEELLSRKDL 279
A ++ GR G + +I AI+ N + S P ++P ++L R+DL
Sbjct: 492 AELIQPVGRIGNLPDEIKAIMIHNNL--SDIKPFEQRFNDMFVNQIPPGSTKDLDKRQDL 549
Query: 280 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 339
R CIFTIDP TA DLDDA+SIE+L D +GVHI+DVS+++ + LD + RSTS+
Sbjct: 550 RKKCIFTIDPLTARDLDDAVSIEQLGDNEYEIGVHISDVSHYLEEDSELDNIVKERSTSI 609
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRTVIRSCCKL 397
Y+ I MLP L SL PG D+LAFS+FW ++ G + RT+IRSC +
Sbjct: 610 YLANEVIHMLPQTLCMRC-SLLPGEDKLAFSVFWRMDRNGVQLQEKPRFTRTIIRSCTQF 668
Query: 398 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 457
+YEHAQ IID + + + +P + F+ SDVV+ + L ++ L+ R+ G+
Sbjct: 669 AYEHAQKIIDNPHERFTEH----DFPTVLNGFQASDVVKRVLCLNGIASSLRKARYEKGS 724
Query: 458 LRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 516
+ N K F+ D G P D + + + N + EE+MLLAN+ A I AFP+ A+LR
Sbjct: 725 ISFNNPKLRFVLDPISGEPEDFEVEMQREANRMIEEYMLLANQAVARFIYDAFPEIAVLR 784
Query: 517 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 576
HP P M+ L+ G LD SSS QS+ + ++ + + L +P
Sbjct: 785 NHPPPLMKSLKALREKFQTLGFNLDYSSSKALQQSIIRMCQEAPNPLAMSFCLSRLLMKP 844
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
M A+YFCS + D HYAL+ P+YTHFTSP+RRYPD++VHR L AAL
Sbjct: 845 MARANYFCSEGRTEPADLWHYALSIPIYTHFTSPIRRYPDVMVHRLLAAAL 895
>gi|383854780|ref|XP_003702898.1| PREDICTED: DIS3-like exonuclease 2-like [Megachile rotundata]
Length = 814
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 178/583 (30%), Positives = 285/583 (48%), Gaps = 86/583 (14%)
Query: 220 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 279
F + + G G++E + NAIL E+ + + +SP + LP + + + ++ +R+D
Sbjct: 260 FAYGKIEKIVGSMGDIEAESNAILLEHDLDVTPYSPILMKGLPNSDYSLTENDIKNREDW 319
Query: 280 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 339
R+ C+FTIDP TA DLDDA+S + L + +GVHIADV++++ + LDI+ R+T++
Sbjct: 320 RDECVFTIDPDTAVDLDDAVSCKILENKNYEIGVHIADVTHYLDFLSPLDIQISKRATTI 379
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 399
YM MLP L EV SL PG D+LAFS+ W++ ++V +TVIRSCC+++Y
Sbjct: 380 YMTDNVYHMLPKQLC-EVCSLLPGQDKLAFSVIWEMTQNAEIVSHRFAKTVIRSCCQMAY 438
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLY----GQFEWSDVVRSIKSLYEVSKILKDKRFTD 455
HAQ+ I+ + WP+ + G F D+ + L+ ++ ++DKRF +
Sbjct: 439 RHAQEFIENP---------KKNWPRKFLRVKGNFNLKDLSTKVNILHSLAIQMRDKRFKN 489
Query: 456 GALRLENSKPVFLFDEYG-TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSAL 514
GALR++ K D P + +D N L EEFMLLAN T A + PD+AL
Sbjct: 490 GALRIDQPKLHVTLDPITRLPISYSIEELKDSNRLIEEFMLLANMTVATYLYDTIPDTAL 549
Query: 515 LRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE---------KLKDDYVL 565
LR H P+ L + K G+ LD SS H S+++ E K Y +
Sbjct: 550 LRNHREPSQYILNTTKDILEKFGIHLDIESSASLHASIKRYEEELESENNEIKTTMKYRM 609
Query: 566 FDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 625
++ N ++ M A+Y CS K + D HYAL +YTHFTSP+RRY D VVHR
Sbjct: 610 M-VINNLCSKAMARATYKCSSTVKSEEDLKHYALNVSLYTHFTSPIRRYSDCVVHRL--- 665
Query: 626 ALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCA 685
LYW + I + +E L C
Sbjct: 666 ------LYWT------------------MQNITLPETWSEKL----------------CK 685
Query: 686 DILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKL 745
+I A +CN +K + ++ +LY L+ +++ VL++ F+ + + +
Sbjct: 686 EI----AANCNLKKYNAKMAQERSNELYFTYLIDLNGPIVTMGIVLSVTENFIDVILCHV 741
Query: 746 AIERRIYYDEVEGLI--------------VEWLETTSTLVLSL 774
I+ RI+ +++ L+ V W +T+ T V+++
Sbjct: 742 GIKLRIFLSKLKDLMDIEYSSECSVSTIRVSWKQTSFTQVINI 784
>gi|322801672|gb|EFZ22295.1| hypothetical protein SINV_03936 [Solenopsis invicta]
Length = 894
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 177/534 (33%), Positives = 276/534 (51%), Gaps = 58/534 (10%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+ TGRVV I+E+ R VG+L K ++SL V P
Sbjct: 269 QKTGRVVCILEKVHSRKA-VGYL-----------------KKQNSLFV-------FFPRD 303
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ P LV LP+S+ +E + + +ID W + F ++ V G+ GE
Sbjct: 304 QRIP----LVDILPESVPSLYQEQPELYKNIMFRVQIDFWEQLHAF--GRIILVVGKVGE 357
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 294
++ ++ AI++EN + S + + L LP + + + ++ +R+D R CIFTIDP +A D
Sbjct: 358 IDTELKAIIFENNLDISPYHEKLLEGLPNSDYILTEADMKNREDWRRECIFTIDPPSAVD 417
Query: 295 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 354
+DDA+S + L +G + VHI+DV++F+ + LD E R+T+VY+ MLP L
Sbjct: 418 IDDAVSCKVLDNGNYEIAVHISDVTHFLEFFSPLDKEVLKRATTVYLPHMTSHMLPEDLC 477
Query: 355 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 414
++ SL PG DRLAFS+ W++ S ++V +TVIRSCC++SY+ AQ II
Sbjct: 478 -KICSLLPGKDRLAFSVIWEITSNAEIVKYRFAKTVIRSCCQMSYDAAQAII-------- 528
Query: 415 SNTLGEGWPQ----LYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 470
N + WP+ + G + S + + L+++S L+ KRF GALRL+ K D
Sbjct: 529 -NNPEKSWPEDFLDIKGDYTTSLLSDIVNKLFKLSTQLQKKRFAHGALRLDQPKLQICLD 587
Query: 471 -----EYG--TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
E+G P + + R D N L EE MLLAN T A + P +ALLR H P+
Sbjct: 588 RTISQEHGIPIPVNYYVHERNDSNSLIEELMLLANMTVATQLFITIPKTALLRIHKEPSK 647
Query: 524 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK---LKDDYV--LFDILINYATRPMQ 578
+ +G+ L+ ++G S+ + + + D+ + + ++IN ++ M
Sbjct: 648 HCINTVHNMLQMYGIHLNIETAGALQASINRYESENGFITDNSMKYIMAVIINLCSKSMT 707
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
A Y C+ D HYAL+ P+YTHFTSP+RRY D +VHR L+A LE + L
Sbjct: 708 RAEYICASTISPH-DLKHYALSVPLYTHFTSPIRRYSDCIVHRLLSATLENKPL 760
>gi|410027787|ref|ZP_11277623.1| RNAse R [Marinilabilia sp. AK2]
Length = 731
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/430 (36%), Positives = 231/430 (53%), Gaps = 38/430 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V +I EW EE P ++ V G+ GE E +I++I+ E + + E +P
Sbjct: 202 VVVKITEWREEDKNPTGKIVRVLGKAGEHEVEIHSIMAEFGLPFE-YPKEVEEEANAIPE 260
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
E+P +E+ +R+D+R+ FTIDP A D DDA+S +L +G +GVHIADV+++V P T
Sbjct: 261 EIPADEIKNRRDMRDIPTFTIDPVDAKDFDDAISYRKLENGNYEIGVHIADVTHYVKPKT 320
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
L+ EA R+TSVY++ R IPMLP LS + SL P D+L FS ++++ DV++ WI
Sbjct: 321 KLEQEAYDRATSVYLVDRTIPMLPERLSNGLCSLRPNEDKLTFSCVFEMDENADVLNHWI 380
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
RTV S + +YE AQ+ ID Q G F + + L E++K
Sbjct: 381 ARTVTHSDRRFAYEEAQENID----------------QQKGDF-----YQELTFLNELAK 419
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI- 505
++ +RF GA+ E + F D+ GTP ++ R+D++ L EEFMLLAN+T AE I
Sbjct: 420 KIRKRRFDKGAINFETVEVKFKLDDKGTPLGLMIKERKDIHKLIEEFMLLANRTVAEFIY 479
Query: 506 -ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV 564
D+ + R H P++ KL F F + G + S + ++L Q L D+ V
Sbjct: 480 NRNKGKDTFVYRIHDFPDIEKLETFSTFAKRFGHDIKISEGTKISKALNQ----LMDEIV 535
Query: 565 ---LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
++L A R M A Y GH+ LAF YTHFTSP+RRYPD++VHR
Sbjct: 536 GKPEQNVLEQLAIRSMAKAKYTTEPK-------GHFGLAFKHYTHFTSPIRRYPDMMVHR 588
Query: 622 TLNAALEAEK 631
L L+ K
Sbjct: 589 LLQHYLDGGK 598
>gi|374386255|ref|ZP_09643755.1| ribonuclease R [Odoribacter laneus YIT 12061]
gi|373224184|gb|EHP46524.1| ribonuclease R [Odoribacter laneus YIT 12061]
Length = 744
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 178/523 (34%), Positives = 259/523 (49%), Gaps = 74/523 (14%)
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 172
++RP G VV I+ER +++ VG + ++ + + L P
Sbjct: 132 SRRPEGEVVEILER--KKNTFVGIIQRSENYAF------------------------LMP 165
Query: 173 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ + P V +P S + GD V +I EW E P V+ V GR
Sbjct: 166 SGKQLPYDVF----IPLSHLGGAKNGDK------VVVQITEWPENQKNPVGTVIQVLGRP 215
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G + ++NAI+ E + + F + L + E+P+EE+ R+D R+ FTIDP A
Sbjct: 216 GNNDTEMNAIMAEYELPVA-FPSKVLKAADRIKLELPEEEVARRRDFRDVVTFTIDPKDA 274
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D DDALSI L G VGVHIADVSY+V + LD EA +R+TSVY++ R +PMLP
Sbjct: 275 KDFDDALSIRELEGGCYEVGVHIADVSYYVAQDSVLDKEAYLRATSVYLVDRTVPMLPEK 334
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS V SL P ++L FS + L+ V+D+W G+TVI S + +YE AQ +I+G
Sbjct: 335 LSNGVCSLRPNEEKLCFSAVFKLDGNAQVLDQWFGKTVILSNRRFTYEEAQVMIEG---- 390
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
EG D + I L +++ L+++RF +GA+ + + F DE
Sbjct: 391 ------AEG-----------DYRKEILQLNGLARKLREERFKNGAIDFDRVEVKFELDEQ 433
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR----AFPDSALLRRHPAPNMRKLRE 528
G P ++ N L EEFMLLANK AE + + P + + R H P KL E
Sbjct: 434 GKPLGVYFKQSKEANKLIEEFMLLANKKVAECVGKIKRGQKPKTFVYRIHDKPMDDKLEE 493
Query: 529 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD--DYVLFDILINYATRPMQLASYFCSG 586
F F +K G L +S S+ + +++K+ + + + L A R M A Y
Sbjct: 494 FNNFVAKFGYGLKLTSRKSLTTSMNKLMQEVKNRPEQNMIETL---AVRTMAKAVY---- 546
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
+ GHY LAF YTHFTSP+RRYPD++VHR L L+
Sbjct: 547 ---STVNIGHYGLAFDYYTHFTSPIRRYPDVMVHRLLQRYLDG 586
>gi|395329023|gb|EJF61412.1| RNB-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 990
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 190/540 (35%), Positives = 271/540 (50%), Gaps = 69/540 (12%)
Query: 103 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSL 160
R A+ + +K+PTGRVV II+R+ W +Y S N +SL
Sbjct: 362 RAEAVKRAESSKQPTGRVVGIIKRN--------------WRSYVCHIDSTSLTSTNPTSL 407
Query: 161 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPF 220
S ++ + TP P+ I+ R + A + +++ ID W S +
Sbjct: 408 S---QQTVFATPVSRLLPR-----------IRLRTRQAPALVGQKILVT-IDRWERTSRY 452
Query: 221 PQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLS--- 275
P+ H + G+ E + ++L E + F L CLP W VP + +
Sbjct: 453 PEGHFIRALGKVQSKEAEQESLLLEFDVPYRPFGKAILDCLPVEGDKWIVPPKNPVDPNW 512
Query: 276 --RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 333
R+DLR+ I +IDP D+DDAL RL +G GVHIADVS+FV P T +D EA
Sbjct: 513 KDREDLRDLIICSIDPPGCQDIDDALHARRLPNGNIEAGVHIADVSHFVHPDTPMDSEAA 572
Query: 334 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 393
R T+VY++ ++I MLP LL + SL P V+RLAFS+ W+L+ D+V+ ++VI S
Sbjct: 573 ARGTTVYLVDKRIDMLPALLGTNLCSLRPHVERLAFSVIWELSPEADIVNVRFTKSVIAS 632
Query: 394 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 453
+YE AQ D D S+ L E SI+ L ++++ L+++R
Sbjct: 633 KSAFTYEEAQIRKD---DPGLSDELTE----------------SIRLLNDLARKLRERRM 673
Query: 454 TDGALRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 511
GAL L + + D E P D + N L EEFMLLAN + A I FP
Sbjct: 674 AAGALNLASPEVKIQLDSSESSDPVDVEQKELRETNSLVEEFMLLANISVARKIQETFPQ 733
Query: 512 SALLRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 568
+A+LRRH P N KL++ + G+ LD SSSG SL++ + + F+
Sbjct: 734 TAVLRRHLPPPRTNFEKLQDI--LGRRKGMTLDVSSSGALAASLDKC---VDPNEPAFNT 788
Query: 569 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
L+ ATR M A YFCSG DT +GHY LA P+YTHFTSP+RRY D++ HR L AA+
Sbjct: 789 LVRIMATRCMLSAEYFCSGSVARDT-FGHYGLASPIYTHFTSPIRRYADVLAHRQLAAAI 847
>gi|404449774|ref|ZP_11014762.1| RNAse R [Indibacter alkaliphilus LW1]
gi|403764621|gb|EJZ25514.1| RNAse R [Indibacter alkaliphilus LW1]
Length = 730
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 192/586 (32%), Positives = 286/586 (48%), Gaps = 83/586 (14%)
Query: 59 SEAYNQEMIEREGYNYINGHH----PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTK 114
S + E IE E +Y+N P + E+ + D NA++ I YP+K
Sbjct: 83 SSVKDPEFIEGE-VDYVNPRFAYVVPDAKHNLEEDIQVKAADMKNALDGDRVRIMVYPSK 141
Query: 115 ----RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL 170
R G+V+ ++ER RD VG + ++ F + VPD + +
Sbjct: 142 GRSGRLEGKVLEVVERD--RDEFVGRVEISPRF---------------AFVVPDFKKM-- 182
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
+ + V DL G A ++V ++ EW + P + V G
Sbjct: 183 ------HQDIFVHKGDL----------GGAEHNQKVVV-KMTEWRDGDKNPTGKITRVLG 225
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPS 290
+ GE E +I++I+ E + G+ E +P +P++E+ R+D+R+ FTIDPS
Sbjct: 226 KAGEHEVEIHSIMAEFGLPF-GYPKEVEEEANEIPEAIPEQEISKRRDMRDIPTFTIDPS 284
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
A D DDA+S RL +G +GVHIADV++FV P T L+ EA R+TSVY++ R IPMLP
Sbjct: 285 DAKDFDDAISYRRLENGNLEIGVHIADVTHFVKPKTMLEKEAYHRATSVYLVDRTIPMLP 344
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 410
LS + SL P D+L FS ++++ DV++ WIGRTV S + +YE AQ+ ID +
Sbjct: 345 ERLSNGLCSLRPNEDKLTFSCVFEMDENADVLNHWIGRTVTHSDRRFAYEEAQECIDKQ- 403
Query: 411 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 470
EG D + L ++K ++ +RF GA+ E + F D
Sbjct: 404 ---------EG-----------DFYSELTLLNNLAKKIRKRRFDKGAVNFETVEVKFKLD 443
Query: 471 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI--ARAFPDSALLRRHPAPNMRKLRE 528
E GTP ++ R+D++ L EEFMLLAN+T AE I D+ + R H P+ +L
Sbjct: 444 EKGTPLGLMIKERKDIHKLIEEFMLLANRTVAEFIFNKNKGADTFVYRIHDHPDSERLET 503
Query: 529 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV---LFDILINYATRPMQLASYFCS 585
F F K G +++ + ++L KL D+ ++L A R M A Y
Sbjct: 504 FSNFAKKFGHEIEIGEGVRISKAL----NKLMDEIAGKPEQNVLEQLAIRSMAKAKYTTE 559
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
GH+ LAF YTHFTSP+RRYPD++VHR L LE K
Sbjct: 560 PK-------GHFGLAFKHYTHFTSPIRRYPDMMVHRLLQHYLEGGK 598
>gi|440751423|ref|ZP_20930656.1| 3'-to-5' exoribonuclease RNase R [Mariniradius saccharolyticus AK6]
gi|436480065|gb|ELP36330.1| 3'-to-5' exoribonuclease RNase R [Mariniradius saccharolyticus AK6]
Length = 730
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 161/431 (37%), Positives = 231/431 (53%), Gaps = 40/431 (9%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFS-PESLSCLPCVP 265
V ++ EW E+ P V+ V G+ GE E +I++I+ E + S PE + +P
Sbjct: 201 VVVKLSEWREDDKNPTGKVIRVLGKAGEHEVEIHSIMAEFGLPFEYPSGPEEEAN--AIP 258
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
+PQ+E+ SR+D+R+ FTIDP A D DDA+S + L +G +GVHIADV+Y+V P
Sbjct: 259 EAIPQQEIQSRRDMRDVPTFTIDPVDAKDFDDAISYQVLPNGNYEIGVHIADVTYYVKPK 318
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
T L+ EA R+TSVY++ R IPMLP LS + SL P D+L FS ++++ DVV W
Sbjct: 319 TQLEKEAFDRATSVYLVDRTIPMLPERLSNGLCSLRPNEDKLTFSCVFEMDENADVVKHW 378
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 445
IGRTV S + +YE Q+ ID + D + + L +++
Sbjct: 379 IGRTVTHSNRRFAYEEGQENIDN---------------------QSGDFYQELTILNDLA 417
Query: 446 KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI 505
K L+ +RF GA+ E + F DE G P ++ R+D++ L EEFMLLAN+T AE I
Sbjct: 418 KKLRKRRFDKGAVNFETVEVKFKLDEKGKPLGLMVKERKDIHKLIEEFMLLANRTVAEFI 477
Query: 506 --ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 563
D+ + R H P++++L F F K G L S + ++L Q L D+
Sbjct: 478 YNKDKGKDTFVYRIHDFPDLQRLETFATFAKKFGHDLKISEGAKISKALNQ----LMDEI 533
Query: 564 V---LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
V ++L A R M A Y GH+ LAF YTHFTSP+RRYPD++VH
Sbjct: 534 VGKPEQNVLEQLAIRSMAKAKYTTEAK-------GHFGLAFAHYTHFTSPIRRYPDMMVH 586
Query: 621 RTLNAALEAEK 631
R L L+ K
Sbjct: 587 RLLQHYLDNGK 597
>gi|449310612|gb|AGE92533.1| RRP44p-like protein [Leishmania braziliensis]
gi|449310634|gb|AGE92544.1| RRP44p-like protein [Leishmania braziliensis]
Length = 920
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 171/463 (36%), Positives = 245/463 (52%), Gaps = 38/463 (8%)
Query: 168 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 227
I P + + P++ + + + D + KRL + ID+W S FP H +
Sbjct: 301 ILFQPKNNRIPRIRISTRHVQDLMDKRL------------SVVIDDWPLYSSFPVGHYVE 348
Query: 228 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTI 287
V G+ G+ + + IL EN + FS CLP W V ++E R DLR+ CI ++
Sbjct: 349 VLGKIGDRDTEATVILLENDVPHYDFSEAVHDCLPKGQWAVTKDEEAKRLDLRDLCIVSV 408
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP D+DDAL ++ VGVHIADV++F+ GTA+D EA RSTSVY++ R+I
Sbjct: 409 DPLGCRDIDDALHCRAVNGNHLEVGVHIADVTHFLPGGTAMDEEAAKRSTSVYLVDRRIN 468
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 407
MLP LL+E + SL DR AFSI W+ + +VV W G+T+IRS L Y AQ +ID
Sbjct: 469 MLPQLLTENLCSLVEAEDRYAFSILWEFDENLNVVRDWFGKTIIRSRGALYYGDAQRMID 528
Query: 408 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
D SD+ S++ L +SK K +R DGAL L + + F
Sbjct: 529 NPADT-------------------SDIAVSLRELMRLSKHFKAQREKDGALFLASQEFKF 569
Query: 468 LFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
D E+ P D + + N + EE+ML AN A + ++P ALLRRH P
Sbjct: 570 KVDNEHVNPTDMQMYQTFEANSMIEEWMLYANAAVATKVYESYPQWALLRRHERPAEGAF 629
Query: 527 REF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFC 584
+A K ++LD ++S + SL++ E +D Y F+ LI TR ++ A YF
Sbjct: 630 DTLNDALFGKLHVRLDDTTSLTLNTSLDKC-EDPRDPY--FNRLIRILTTRCLRQAQYFS 686
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
SG D ++ H+ LA P+YTHFTSP+RRY D++VHR L AA+
Sbjct: 687 SGGIPKD-EFCHFGLAMPIYTHFTSPIRRYADVIVHRQLAAAI 728
>gi|154340223|ref|XP_001566068.1| putative rrp44p homologue [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063387|emb|CAM39564.1| putative rrp44p homologue [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 920
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 171/463 (36%), Positives = 245/463 (52%), Gaps = 38/463 (8%)
Query: 168 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 227
I P + + P++ + + + D + KRL + ID+W S FP H +
Sbjct: 301 ILFQPKNNRIPRIRISTRHVQDLMDKRL------------SVVIDDWPLYSSFPVGHYVE 348
Query: 228 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTI 287
V G+ G+ + + IL EN + FS CLP W V ++E R DLR+ CI ++
Sbjct: 349 VLGKIGDRDTEATVILLENDVPHYDFSEAVHDCLPKGQWAVTKDEEAKRLDLRDLCIVSV 408
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP D+DDAL ++ VGVHIADV++F+ GTA+D EA RSTSVY++ R+I
Sbjct: 409 DPLGCRDIDDALHCRAVNGNHLEVGVHIADVTHFLPGGTAMDEEAAKRSTSVYLVDRRIN 468
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 407
MLP LL+E + SL DR AFSI W+ + +VV W G+T+IRS L Y AQ +ID
Sbjct: 469 MLPQLLTENLCSLVEAEDRYAFSILWEFDENLNVVRDWFGKTIIRSRGALYYGDAQRMID 528
Query: 408 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
D SD+ S++ L +SK K +R DGAL L + + F
Sbjct: 529 NPADT-------------------SDIAVSLRELMRLSKHFKAQREKDGALFLASQEFKF 569
Query: 468 LFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
D E+ P D + + N + EE+ML AN A + ++P ALLRRH P
Sbjct: 570 KVDNEHVNPTDMQMYQTFEANSMIEEWMLYANAAVATKVYESYPQWALLRRHERPAEGAF 629
Query: 527 REF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFC 584
+A K ++LD ++S + SL++ E +D Y F+ LI TR ++ A YF
Sbjct: 630 DTLNDALFGKLHVRLDDTTSLTLNTSLDKC-EDPRDPY--FNRLIRILTTRCLRQAQYFS 686
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
SG D ++ H+ LA P+YTHFTSP+RRY D++VHR L AA+
Sbjct: 687 SGGIPKD-EFCHFGLAMPIYTHFTSPIRRYADVIVHRQLAAAI 728
>gi|303285115|ref|XP_003061848.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457178|gb|EEH54478.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 889
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 203/657 (30%), Positives = 310/657 (47%), Gaps = 113/657 (17%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTG VV I+ RS R G ++ + T TH
Sbjct: 329 PTGEVVGIVRRSWRERGYAASID---------------------------DATNATQTHA 361
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ + + LP I+ + + A ++ +V ID+W +SP P+ H + G G+
Sbjct: 362 VRLLAIPVDRRLP-KIRIQTRQASALLDQRIVVV-IDDWPIDSPHPRGHYVKSLGPLGDA 419
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS----RKDLRNFCIFTIDPST 291
+ + +A+L E + F+P +C+P +PW + L R+DLR+ + ++DP
Sbjct: 420 DAETDAVLLEADVDDRLFAPAVHACVPPLPWAFDERAHLGAQPHREDLRSLRVCSVDPPG 479
Query: 292 ATDLDDALSIERLSD-------GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
D+DDALS L D G +GVHIADV+ F+ P TA+D EA+ R T+ Y++QR
Sbjct: 480 CRDIDDALSCRVLVDDDDGAETGQLELGVHIADVTSFLRPNTAMDAEARKRGTTTYLVQR 539
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV----VDRWIGRTVIRSCCKLSYE 400
++ MLP L+E++ SL GV+RLAFS+F+ ++ + V ++ I+S L+Y+
Sbjct: 540 RLDMLPKPLTEDICSLRGGVERLAFSVFFRFDAKTCLPVPGVSPRFTKSAIKSSAALTYQ 599
Query: 401 HAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 460
AQ+++D + D ES T +R + ++ ++ L+ +R GAL L
Sbjct: 600 EAQELMDDETD-ESPLTRD---------------LRRVLNINRCARALRKRRVDAGALTL 643
Query: 461 ENSKPVFLFDEYGT-PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 519
+ + F D P D + + N + EE MLLAN AAE I +AFP ALLRRHP
Sbjct: 644 ASPEVRFELDASTQDPLDVAMYVTREANQMVEEMMLLANVAAAEAILKAFPSHALLRRHP 703
Query: 520 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 578
P R C+ G+ +D SSS SL+ AR + D Y F+ L+ ATR M
Sbjct: 704 TPAPRMFDPLLKACAAVGVDIDASSSKTLADSLDAAR-RPGDPY--FNTLLRIVATRCMS 760
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRR 638
A Y SG + D HY LA P+YTHFTSP+RRY D+VVHR LNAAL E+
Sbjct: 761 QAVYCVSGAHSVN-DRVHYGLAAPLYTHFTSPIRRYADVVVHRLLNAALGLER------- 812
Query: 639 MLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDR 698
P + ++G D L A + N R
Sbjct: 813 --PDASLQDG-------------------------------------DALKATAENINSR 833
Query: 699 KLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDE 755
++ A V+L+ I KK + ++ARV+ + + +++ K IE + +DE
Sbjct: 834 HRNSQSAGRASVELHTHIFFKKNKA-ETDARVIRVRANGIIVFVPKFGIEAPVLFDE 889
>gi|281208784|gb|EFA82959.1| putative exoribonuclease [Polysphondylium pallidum PN500]
Length = 954
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 257/516 (49%), Gaps = 53/516 (10%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PTGRVV II+R+ W Y G + K + +S+ ++ +
Sbjct: 344 QPTGRVVGIIKRN--------------WKPYCGAV--EFKGDINSVVTNQQQQLLFVAID 387
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ PK+ + + + + +R + ID W S +P H + G G+
Sbjct: 388 RRIPKIRIRSRQVSSVVGRR------------IVVAIDSWERHSRYPSGHFVKDLGPLGD 435
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPC--VPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
E + +L + I F + CLP + V ++L R+DLR CIF++DP
Sbjct: 436 RETESQVLLLQFDIPHHPFGASVMKCLPPPDIMDHVSPADMLGRRDLRGECIFSVDPPGC 495
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL +RL DG VGVHIADVS+FV G A+D EA R T+VY++ R+I MLP
Sbjct: 496 TDIDDALHCKRLPDGNFEVGVHIADVSHFVREGAAIDEEASHRGTTVYLVDRRIDMLPGE 555
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL VDR +FS+ W ++ G+V+D +++IRS ++YE AQ K D
Sbjct: 556 LSSNLCSLMSNVDRFSFSVIWKMDPNGNVLDVEYTKSLIRSVASMTYEQAQ----IKIDD 611
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
S N + V +++ + +SK LK KRF GAL L + + F +E
Sbjct: 612 ASQNDI---------------VATNLRLMLALSKKLKSKRFDAGALILASPQVKFKTEEV 656
Query: 473 -GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
G P D L + N + EEFMLLAN A+ I + FP ALLRRHP P
Sbjct: 657 GGDPSDVELYQMRETNSMIEEFMLLANIWVAKKIHKHFPGCALLRRHPTPKASSFELLSK 716
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
+ G T +S +SL+ + DD +L TR M A YF SG +
Sbjct: 717 LVEQKGFDFRTDTSKLLAESLDLC--VIPDDPYFNTLLRIMTTRCMFPAQYFSSGSVPYE 774
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
++ HY LA +YTHFTSP+RRYPD++VHR L +A+
Sbjct: 775 -EYFHYGLASEIYTHFTSPIRRYPDVIVHRLLASAI 809
>gi|71649179|ref|XP_813334.1| RRP44p homologue [Trypanosoma cruzi strain CL Brener]
gi|70878207|gb|EAN91483.1| RRP44p homologue, putative [Trypanosoma cruzi]
Length = 972
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 185/526 (35%), Positives = 270/526 (51%), Gaps = 54/526 (10%)
Query: 116 PTGRVVSI--IERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
P GRVV I +ER P G ++V + +R A + + S +V + P
Sbjct: 328 PVGRVVGITSMERRP----FCGSIDVEEL------TRLTASEGKISGAVS----VLFQPK 373
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ P++ + +DL KRL + ID+W E + FP H + V G G
Sbjct: 374 DNRIPRIRISTRDLEYLKDKRL------------SVIIDDWPEYNSFPVGHYVEVLGTIG 421
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ + + IL EN + FS CLP W V ++EL R DLR+ C+ ++DP
Sbjct: 422 DKDTEAKVILLENDVPHYDFSEAVYDCLPKGQWSVSKDELERRLDLRDLCVVSVDPLGCR 481
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL +++ VGVHIADV++F+ TA+D EA RSTSVY++ R+I MLP LL
Sbjct: 482 DIDDALHCRVVNENHFEVGVHIADVTHFLHENTAMDEEAAKRSTSVYLVDRRINMLPQLL 541
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
+E + S+ DR AFSI W+ + +VV + G+TVIRS L Y AQ +ID DV
Sbjct: 542 TENLCSIVSNEDRYAFSILWEFDEEYNVVRDYFGKTVIRSRAALYYGDAQRMID---DVN 598
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF-LFDEY 472
S++ S++ L +S+ K R DGAL L + + F + +++
Sbjct: 599 DK----------------SEIAVSLRHLMNISRHFKAMREKDGALFLASQEFKFKVENDH 642
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EA 531
P D + + N + EE+ML AN AA + ++P LLRRH P EA
Sbjct: 643 VNPTDMQVYQTFEANSMIEEWMLFANAAAARKVYESYPRWTLLRRHQRPAENAFDNLNEA 702
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
K GL+LD ++S + SL + D V F+ LI TR ++ A YF S +
Sbjct: 703 LERKLGLRLDDTTSLTLNTSLNAC---IDPDDVYFNQLIRILVTRCLRQAQYFSSSEVSQ 759
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
D ++ H+ LA P+YTHFTSP+RRY D++VHR L AAL ++ KH
Sbjct: 760 D-EFYHFGLAMPIYTHFTSPIRRYADVIVHRQLAAALGIMQVSEKH 804
>gi|195170518|ref|XP_002026059.1| GL16114 [Drosophila persimilis]
gi|194110939|gb|EDW32982.1| GL16114 [Drosophila persimilis]
Length = 1143
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 159/411 (38%), Positives = 227/411 (55%), Gaps = 13/411 (3%)
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP---QEELLSRKDL 279
A ++ GR G + +I AI+ N + S P +P ++L R+DL
Sbjct: 523 AELIQPVGRIGNLPDEIKAIMIHNNL--SDIKPFEQRFNDMFVNHIPPGSTKDLDKRQDL 580
Query: 280 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 339
R CIFTIDP TA DLDDA+SIE+L D +GVHI+DVS+++ + LD + RSTS+
Sbjct: 581 RKKCIFTIDPLTARDLDDAVSIEQLGDNEYEIGVHISDVSHYLEEDSELDNIVKERSTSI 640
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRTVIRSCCKL 397
Y+ I MLP L SL PG D+LAFS+FW ++ G + RT+IRSC +
Sbjct: 641 YLANEVIHMLPQTLCMRC-SLLPGEDKLAFSVFWRMDRNGVQLQEKPRFTRTIIRSCTQF 699
Query: 398 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 457
+YEHAQ IID + + + +P + F+ SDVV+ + L ++ L+ R+ G+
Sbjct: 700 AYEHAQKIIDNPHERFTEH----DFPTVLNGFQTSDVVKRVLCLNGIASSLRKARYEKGS 755
Query: 458 LRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 516
+ N K F+ D G P D + + + N + EE+MLLAN+ A I AFP+ A+LR
Sbjct: 756 ISFNNPKLRFVLDPISGEPEDFEVEMQREANRMIEEYMLLANQAVARFIYDAFPEIAVLR 815
Query: 517 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 576
HP P M+ L+ G LD SSS QS+ + ++ + + L +P
Sbjct: 816 NHPPPLMKSLKALREKFQTLGFNLDYSSSKALQQSIIRMCQEAPNPLAMSFCLSRLLMKP 875
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
M A+YFCS + D HYAL+ P+YTHFTSP+RRYPD++VHR L AAL
Sbjct: 876 MARANYFCSEGRTEPADLWHYALSIPIYTHFTSPIRRYPDVMVHRLLAAAL 926
>gi|326436223|gb|EGD81793.1| mitotic control protein dis3 [Salpingoeca sp. ATCC 50818]
Length = 1066
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 164/435 (37%), Positives = 235/435 (54%), Gaps = 26/435 (5%)
Query: 202 IEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCL 261
I ++V A ID W +S +P H + G G+ E + +L E+ + FS L CL
Sbjct: 377 IGQQIVVA-IDAWPSKSRYPVGHFVRRLGPIGDRETETEVVLLEHDVPYEAFSQAVLDCL 435
Query: 262 PCVPWEVPQ--EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 319
P W + L R+DLR+ I ++DP TD+DDAL L +G +GVHIADV+
Sbjct: 436 PSETWTCSDAPDSLAKRRDLRHLNICSVDPPGCTDIDDALHARELDNGNYEIGVHIADVT 495
Query: 320 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 379
YFV PG+ALD EA R T+VY+ R+I M+P LLS + SL G +R AFS W++
Sbjct: 496 YFVRPGSALDKEAAKRGTTVYLADRRIDMVPGLLSSNLCSLRGGEERFAFSCVWEITKEA 555
Query: 380 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 439
++V +++I+S + Y AQ ID K D S++ +S++
Sbjct: 556 EIVSTEFFKSIIKSKSAMMYSEAQMRIDDKSD-------------------NSELTQSLR 596
Query: 440 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 498
L ++K L+ +R GAL L +++ F D E P D + + + N + EEFMLLAN
Sbjct: 597 VLNSLAKKLRRRRIERGALMLASTEVRFSMDNETNDPVDMKIKEQYETNSMVEEFMLLAN 656
Query: 499 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
+ AE I R FP A+LRRHP+P G++L T+SS + SL++A +
Sbjct: 657 VSTAEHIFRHFPQCAVLRRHPSPPPANFEPLLKAAHVAGVELSTASSKELAVSLDRAAPE 716
Query: 559 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
K L +L ATR M A YF SG T++ HY LA P+YTHFTSP+RRY D++
Sbjct: 717 GKP--YLRTLLRMLATRCMMQAVYFSSGTVP-QTEFKHYGLASPIYTHFTSPIRRYADVL 773
Query: 619 VHRTLNAALEAEKLY 633
VHR L A++ A+ Y
Sbjct: 774 VHRLLAASIGADITY 788
>gi|146091582|ref|XP_001470065.1| putative ribonuclease II-like protein [Leishmania infantum JPCM5]
gi|134084859|emb|CAM69257.1| putative ribonuclease II-like protein [Leishmania infantum JPCM5]
Length = 942
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 213/650 (32%), Positives = 324/650 (49%), Gaps = 90/650 (13%)
Query: 112 PTKRPTGRVVSIIERS-PRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL 170
P KRP GRV+ I++R PR V + NQ +G + ++ Y +
Sbjct: 155 PEKRPLGRVIRILKRCLPRLH--VARIADNQVHPGEG--------------LQEKYYYRF 198
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEME-------LVAARIDEWNEESPFPQA 223
P + YP++ V D+ + + ++ +E L R+ P A
Sbjct: 199 RPFNQLYPQLTVQGCDIMAAYHANISTSLFSLALEHGENGEILTTPRV---------PNA 249
Query: 224 HVLHVFGRGGEVEPQINAILYENAICCS------GFSPESLSCLPCVPWEVPQEELLS-- 275
+ V G+ A +AIC S FS E+ +C+ + +P L+
Sbjct: 250 LLCKVHSFLGDASTMAVA---SHAICTSCNVSNEPFSEEAEACV-LKDFTIPSPAELADM 305
Query: 276 -RKDLRNF-CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 333
R+DLR+ + TIDP+TA DLDDALSI+ DG VGVHIADVS+FVLP TALD EAQ
Sbjct: 306 GRRDLRDSEFVLTIDPATARDLDDALSIKPRKDGGYHVGVHIADVSHFVLPRTALDEEAQ 365
Query: 334 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD--------RW 385
RS S Y++ R IPMLP LSEE SLNPG D+ AFS ++ + G ++ W
Sbjct: 366 RRSNSTYLVDRVIPMLPSRLSEEYCSLNPGEDKFAFSGLFEFDRDGHLISEAATGEKCEW 425
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGK----FDV-ESSNTLGEGWPQLYGQFEWSDVVRSIKS 440
G++VIRS C+L+YE AQ I+DG DV ++++ LG G + V +S+ +
Sbjct: 426 FGQSVIRSRCRLAYEQAQQILDGDDTVVLDVAQAASDLGIG-----EEAARKKVKQSVTN 480
Query: 441 LYEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGRE-DLNFLFEEFMLLA 497
L+ ++ L+ + DG + + N++ F FD E +P S + N+L EEFMLLA
Sbjct: 481 LFALASKLRQQSLRDGRVVIGNTRLAFRFDRNEVNSPPTSFFVQEQIQANWLVEEFMLLA 540
Query: 498 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 557
N+ A+ I + P ALLRRH P +K+R S GL SS + + ++ ++
Sbjct: 541 NQRVAQKIVQYIPYGALLRRHKPPQPQKMRRLRTALSHRGLPTGGSSGQELQRMIDTIKK 600
Query: 558 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
+ D+ L+ Y+ +A+ + + D + H+A+A P YTHFTSP+RRY DL
Sbjct: 601 DHRGDFHTVCELLKYSL----MAAEYIANDPTEKDIRSHFAVAAPWYTHFTSPIRRYCDL 656
Query: 618 VVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAE--SLEGREAL-S 674
+VHR L ALE E+ + + +P H + R + IF A + L+ RE
Sbjct: 657 MVHRQLRVALELERCMEEAQMEMPNAPH-PALETRPVDCIFDPTRAVDVHKLKTRELFYP 715
Query: 675 VAALKYGVPCADILVNVATHCNDRKLACRNVKDACVK----LYMWILLKK 720
++AL++ + TH N+ +L R+ D ++ LY+ L K+
Sbjct: 716 LSALEH----------IVTHANECRLNSRSAGDMSLEYSLCLYLLALQKR 755
>gi|340914648|gb|EGS17989.1| exosome complex exonuclease-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 986
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 193/578 (33%), Positives = 286/578 (49%), Gaps = 64/578 (11%)
Query: 65 EMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERL-SAMISSYPTKRPTGRVVSI 123
++IE E +P +ST+ VS ++ ++R+ S +P +PT RVV +
Sbjct: 329 QVIEEEAIT--KNENPDAEESTDLVSEKERKALQEEVKRMHSKTTEGHP--QPTARVVGV 384
Query: 124 IERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVL 183
I+R+ R+ VG ++ + RK ++ + + P + PK+ +
Sbjct: 385 IKRNWRQ--YVGHIDQSSISQSAQQGRK-------------QDSVFVIPMDRRIPKIRLR 429
Query: 184 VKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAIL 243
+ + + + KR+ LVA ID W+ S P H++ G + A+L
Sbjct: 430 TRQVAELVGKRI----------LVA--IDAWDRSSRHPTGHLIRSLGEMETNAAETEALL 477
Query: 244 YENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDD 297
E + F L CLP W VP+++ R+DLR+ I +IDP D+DD
Sbjct: 478 LEYDVQYRPFPKTVLDCLPKEGHDWRVPEDKNDPGWRDREDLRHLLICSIDPIGCQDIDD 537
Query: 298 ALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEV 357
AL L +G VGVHIADVS+FV P A+D+EA +R T+VY++ ++I MLP LL ++
Sbjct: 538 ALHSRPLPNGNFEVGVHIADVSHFVRPNNAMDLEASIRGTTVYLVDKRIDMLPTLLGTDL 597
Query: 358 GSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNT 417
SL P V+R AFS+ W+L D+V ++VI+S SYE AQ +D
Sbjct: 598 CSLKPYVERYAFSVLWELTPDADIVSVRFTKSVIKSREAFSYEQAQMRVDD--------- 648
Query: 418 LGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPY 476
G ++ D+ +SI++L +S+ LK KR GAL L + + + + E P
Sbjct: 649 ---------GSYQ-DDLTKSIRTLLALSRKLKQKRMDAGALSLSSPEVKIHMESETSDPI 698
Query: 477 DSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSK 535
D L EEFMLLAN + A I AFP +A+LRRH AP E K
Sbjct: 699 DIKTKKHLPTMSLVEEFMLLANISVARKIYEAFPQTAILRRHAAPPKTNFDELANQLRVK 758
Query: 536 HGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDW 594
GL+L SS SL++ + + F+ L+ ATR M A YFCSG + ++
Sbjct: 759 RGLELSVESSKALADSLDRC---VDPNEPFFNTLVRIMATRCMMAAEYFCSGT-QAYPEF 814
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
HY LA +YTHFTSP+RRY DLV HR L AA+ E +
Sbjct: 815 RHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIGYEAI 852
>gi|401424784|ref|XP_003876877.1| putative ribonuclease II-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493121|emb|CBZ28406.1| putative ribonuclease II-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 941
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 217/647 (33%), Positives = 325/647 (50%), Gaps = 80/647 (12%)
Query: 112 PTKRPTGRVVSIIERS-PRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL 170
P KRP GRV+ I++R PR V + NQ + G R + ++ Y +
Sbjct: 154 PEKRPLGRVIRILKRCLPRLH--VARIADNQ---VQPGER-----------LQEKYYYRF 197
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNE----ESP-FPQAHV 225
P + YP++ + D+ + A I M L + ++ +P P A +
Sbjct: 198 RPFNQLYPQLTLQGCDI-------MAAYHAHINMSLFSLALERGGNGEILTTPRVPNALL 250
Query: 226 LHVFGRGGEVEPQINAILYENAICCS------GFSPESLSCLPCVPWEVPQE-EL--LSR 276
V G+ A +AIC S FS E+ +C+ + +P EL + R
Sbjct: 251 CKVHSFLGDASTMAVA---SHAICTSCNVSNEPFSEEAEACV-LKDFTIPSAAELVDMGR 306
Query: 277 KDLRNF-CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVR 335
+DLR+ + TIDP+TA DLDDALSI+ DG VGVHIADVS+FVLP TALD EAQ R
Sbjct: 307 RDLRDSEFVLTIDPATARDLDDALSIKPRKDGGYHVGVHIADVSHFVLPRTALDEEAQRR 366
Query: 336 STSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD--------RWIG 387
S S Y++ R IPMLP LSEE SLNPG D+ AFS ++ + G ++ W G
Sbjct: 367 SNSTYLVDRVIPMLPSRLSEEYCSLNPGEDKFAFSGLFEFDRDGHLISEAATGEKCEWFG 426
Query: 388 RTVIRSCCKLSYEHAQDIIDGK----FDV-ESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
++VIRS C+L+YE AQ I+DG DV +++ LG G + + V +S+ +L+
Sbjct: 427 QSVIRSRCRLAYEQAQQILDGDDTVVLDVAQAAADLGIG-----EEAARNKVKQSVANLF 481
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGRE-DLNFLFEEFMLLANK 499
+++ L+ + DG + + N++ F F+ E +P S + N+L EEFMLLAN+
Sbjct: 482 KLASKLRQQSLRDGRVVIGNTRLAFRFERNEVNSPPTSFFVQEQIQANWLVEEFMLLANQ 541
Query: 500 TAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 559
A+ I + P ALLRRH P +K+R A S GL SS + + ++ ++
Sbjct: 542 RVAQKIVQFIPYGALLRRHKPPKPQKMRRLRAALSHRGLPTGGSSGQELQRIIDTIKKDH 601
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
+ D+ L+ Y+ +A+ + + D + H+A+A P YTHFTSP+RRY DL+V
Sbjct: 602 RGDFHTVCELLKYSL----MAAEYIANDPTEKDIRSHFAVAAPWYTHFTSPIRRYCDLMV 657
Query: 620 HRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALK 679
HR L ALE E+ + + +P H V R GIF A + L L
Sbjct: 658 HRQLRVALELERCMEEAQMEMPNTPH-PAVETRPGDGIFDPTCAVDV----NKLKTRDLF 712
Query: 680 YGVPCADILVNVATHCNDRKLACRNVKDACVK----LYMWILLKKKE 722
Y L ++ TH N+ +L R+ D ++ LY+ L K+ +
Sbjct: 713 YP---HSALEHIVTHANECRLNSRSAGDMSLEYSLCLYLLALQKRAK 756
>gi|410912588|ref|XP_003969771.1| PREDICTED: DIS3-like exonuclease 1-like [Takifugu rubripes]
Length = 1044
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 273/524 (52%), Gaps = 44/524 (8%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP-DREYIQLTPTH 174
PTGRVV I++R+ RD +V F + G++ ++ ++ L+VP DR
Sbjct: 319 PTGRVVGILQRN-WRDYVVTFPP-------RDGTQPQSRNSKHILTVPWDR--------- 361
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ PK I+ ++ DA ++ V RID W S +P H + V GR GE
Sbjct: 362 -RIPK-----------IRISTQQADA-LQDHRVVVRIDSWESTSQYPNGHTVRVLGRAGE 408
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDP 289
+E +I IL EN I S FS L +P PW V ++ +R+DLR + +F+IDP
Sbjct: 409 LETEIQTILVENCIHVSSFSEAQLREMPVNSPERPWRVDAAQVAARRDLRESRLVFSIDP 468
Query: 290 STATDLDDALSIERLSDGIS-RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
D+DD LS+ RL G + +GVHIADV++FV G+ D+EA++R+T+ Y+ R+ M
Sbjct: 469 RGCEDVDDTLSVHRLDGGAALELGVHIADVTHFVAEGSLTDVEARLRATTYYLADRRYDM 528
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV-DRWIGRTVIRSCCKLSYEHAQDIID 407
LP +LS ++ SL GVDR A S+ W L++ V D W GRT+IRS +L YE AQ +++
Sbjct: 529 LPPVLSSDLCSLLGGVDRYAMSVIWQLDAHTLAVRDVWFGRTIIRSSYQLHYELAQALLN 588
Query: 408 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
G + L P+ + + + ++++ L +V++ L+ +R GAL LE +
Sbjct: 589 G--EPAEVPELAALRPE-EKDAKLAKLTQALEMLTQVARHLRARRDRGGALELEGMEVQA 645
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
D+ V +++ E M+ AN A I FP ALLRRHP P
Sbjct: 646 QLDKDKNITALVPRQPLEVHETVAECMIYANHWVARKIQETFPHQALLRRHPPPRQEFFS 705
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 587
+ + G + T S+ +SL+QA + D ++ +L AT M A YF +G
Sbjct: 706 QLVDSATARGFTISTRSNKDLAESLDQAVD--PQDALVNRLLRMMATSAMSQALYFSTG- 762
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
+ + HY LA YTHFTSP+RRY D VVHR L AA+ E+
Sbjct: 763 LQPQDQYYHYGLALDRYTHFTSPIRRYADTVVHRLLTAAVALEE 806
>gi|380015637|ref|XP_003691806.1| PREDICTED: exosome complex exonuclease RRP44-like [Apis florea]
Length = 971
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 183/556 (32%), Positives = 274/556 (49%), Gaps = 60/556 (10%)
Query: 81 STSDSTEKVSSSQQNDGMNAIERLSAMISSYPT-KRPTGRVVSIIERSPRRDGIVGFLNV 139
S SD + +D + + L ISS K PTG++V II R+ R+ + +
Sbjct: 296 SPSDIVLQDEEETDDDALETKKVLDKFISSNKMEKSPTGKIVGIIRRNWRQ-----YCGI 350
Query: 140 NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGD 199
Q N +G R P K PK+ + + K+R+
Sbjct: 351 LQPSNIEGNVRH-----------------LFVPAERKIPKIRIETRQYGMLSKQRI---- 389
Query: 200 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 259
+VA ID W S +P H + G G+ + IL E+ I S FS LS
Sbjct: 390 ------IVA--IDSWPRNSRYPLGHFVRALGEIGDKTTENEVILLEHDIPHSRFSDAVLS 441
Query: 260 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 319
LP +PW + +L+ R+D R+ I ++DP TD+DDAL LS+G VGVHIADV+
Sbjct: 442 SLPKMPWCITDSDLVQREDFRHLDICSVDPPGCTDIDDALHCRYLSNGNLEVGVHIADVT 501
Query: 320 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 379
+F+ PGTALD EA +RST+VY++ +I MLP LLS + SL +RL FS W+++
Sbjct: 502 HFMRPGTALDKEAALRSTTVYLVDTRIHMLPDLLSSNLCSLREKEERLTFSCIWEMDEDA 561
Query: 380 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 439
++++ +++I S ++Y+ AQ ID DV ++L +S++
Sbjct: 562 NIINTRYCKSIIYSRAAMTYDEAQLKID---DVSQQDSLS----------------KSLR 602
Query: 440 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 498
+L ++K LK +R +GAL L + + F D E P D + N + EEFMLLAN
Sbjct: 603 NLNSLAKKLKKRRLENGALVLASPEIRFQVDCETHDPIDVEAKKLRETNSMVEEFMLLAN 662
Query: 499 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
+ A I FP+ A+LRRHP P G ++ +S + +SL+
Sbjct: 663 ISVATKILEEFPECAILRRHPEPPPSNFEPLIKAAKNQGFIINVNSGKELAESLDNCH-- 720
Query: 559 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
K+ F+ ++ TR M A YF SG +++ HY LA P+YTHFTSP+RRY D+
Sbjct: 721 -KESNPYFNTMLRILTTRCMMQAIYFISG-MHQQSEYYHYGLACPIYTHFTSPIRRYADV 778
Query: 618 VVHRTLNAALEAEKLY 633
+VHR L + A+ Y
Sbjct: 779 MVHRLLAVCIGADATY 794
>gi|343424768|emb|CBQ68306.1| probable DIS3 3`-5` exoribonuclease required for 3` end formation
of 5.8S rRNA [Sporisorium reilianum SRZ2]
Length = 1009
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 190/538 (35%), Positives = 269/538 (50%), Gaps = 65/538 (12%)
Query: 109 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 168
SS +PTG+VV I+ R+ R V ++VN N S+LS + +
Sbjct: 383 SSRGEPQPTGKVVGIVRRNWR--SYVAHVDVNSV-------------NSSALSSLGAQTV 427
Query: 169 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
TP K P++ + + D I +++ LVA +D W S +P H +
Sbjct: 428 FATPVDRKLPRIRIRTRQARDLIGQKI----------LVA--LDAWRPTSRYPDGHFVRA 475
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLSRK-----DLRN 281
G+ E + ++L E+ + FS L CLP W VP +++ R D+R+
Sbjct: 476 LGQAESKEAEQESLLLEHDVPYRPFSKAILDCLPVEGDSWVVPPKDMTHRAWRDRVDMRD 535
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL ++L +G GVHIADVSYFV P +D EA R T+VY+
Sbjct: 536 EIICSIDPPGCQDIDDALHAKQLPNGNIEAGVHIADVSYFVRPDNPMDAEAASRGTTVYL 595
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ ++I MLP LL + SL P V+RLAFS W++ ++V+ ++VI S +YE
Sbjct: 596 VDKRIDMLPHLLGTNLCSLRPYVERLAFSAVWEMTPEAEIVNVRFHKSVIASKAAFTYEE 655
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ D +S + +SI+ L ++K LK KR GAL L
Sbjct: 656 AQLRKDDPSKTDS-------------------ITQSIRLLNSLAKKLKQKRMDAGALNLA 696
Query: 462 NSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH- 518
+ + D E P D + N L EEFMLLAN + AE I FP +A+LRRH
Sbjct: 697 SPEVRIHLDSSESAAPIDVEQKEMRETNSLVEEFMLLANVSVAERIYDVFPMTAVLRRHL 756
Query: 519 --PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATR 575
P N L++ + GL+LD SSSG SL++ + KD F+ L+ ATR
Sbjct: 757 PPPRTNFETLQDI--LLKRRGLELDVSSSGALAASLDKCVDA-KD--ATFNTLVRIMATR 811
Query: 576 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
M A YFCSG DT + HY LA +YTHFTSP+RRY D++ HR L AA+ E L+
Sbjct: 812 CMLSAEYFCSGSVARDT-FNHYGLAAGMYTHFTSPIRRYADVLAHRQLAAAINYEPLH 868
>gi|390344153|ref|XP_787332.3| PREDICTED: exosome complex exonuclease RRP44-like
[Strongylocentrotus purpuratus]
Length = 1091
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 157/428 (36%), Positives = 231/428 (53%), Gaps = 23/428 (5%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
+ ID W +S +P H + G G+ + + +L E+ + FS LS LP +PW
Sbjct: 522 IIVSIDSWPRDSRYPLGHFVRNLGAIGDKDTENEVLLLEHDVPHLPFSEAVLSFLPKLPW 581
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+ +E+ R+DLR+ I ++DP TD+DDAL + L +G + VGVHIADVS+F+ PG
Sbjct: 582 TITKEDETVREDLRHIDICSVDPPGCTDIDDALHYKPLENGNAEVGVHIADVSHFIKPGN 641
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
ALD EA R T+VY++ R+I M+P LLS + SL GV+R AFS W++ ++V+
Sbjct: 642 ALDTEACSRGTTVYLVDRRIDMVPDLLSSNLCSLRGGVERFAFSTLWEMTPGAEIVNVRF 701
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
+++I+S +YE AQ+ ID K ++ L G ++ L ++K
Sbjct: 702 TKSIIKSRAAYTYEQAQNKIDDK---SQNDALAIG----------------LRGLLRMAK 742
Query: 447 ILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI 505
ILK KR +GAL L +S+ F D E P + + N + EEFMLLAN + A+ I
Sbjct: 743 ILKQKRTDNGALTLASSEIRFSMDSETHDPIEVERKVMRETNSMVEEFMLLANVSVAQRI 802
Query: 506 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVL 565
+ FP SA LRRHP P + G +L S SL++A +
Sbjct: 803 RQEFPQSACLRRHPVPPLSNFEPIIKVALTRGFELQVDSGKALADSLDKA--NIPSIPFF 860
Query: 566 FDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 625
+L TR M A YF SG +D ++ H+ LA P+YTHFTSP+RRY D++VHR L
Sbjct: 861 NQLLRMMTTRCMTQALYFSSGMLPED-EYLHFGLASPIYTHFTSPIRRYSDVIVHRMLAV 919
Query: 626 ALEAEKLY 633
A+ A+ +
Sbjct: 920 AISADACF 927
>gi|169623574|ref|XP_001805194.1| hypothetical protein SNOG_15030 [Phaeosphaeria nodorum SN15]
gi|160705007|gb|EAT77573.2| hypothetical protein SNOG_15030 [Phaeosphaeria nodorum SN15]
Length = 999
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 196/586 (33%), Positives = 282/586 (48%), Gaps = 70/586 (11%)
Query: 60 EAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGR 119
+A + ++IE E N + D VS ++ ++R+ ++ +PT R
Sbjct: 340 KAPSTKIIEEETLN--KNDNAEAEDGENVVSEKERKALQEEVKRVHGQ-TAEGKPQPTAR 396
Query: 120 VVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPK 179
+V I +R+ W Y G +D+ ++ S S ++ + L P + PK
Sbjct: 397 IVGIAKRN--------------WRQYVGHIDRDSVRSSSKTSRA-QQTVFLVPMDKRIPK 441
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG----RGGEV 235
+ + + + + +R + A ID W+++S +P H + G +G E
Sbjct: 442 IRIRTRQAGELLGQR------------ILATIDSWDKDSRYPVGHFVRSLGELESKGAET 489
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDP 289
E A+L E + F L CLP W+VP RKDLR+ + +IDP
Sbjct: 490 E----ALLLEYDVQYKPFPKTVLDCLPAEGHDWKVPASPEDPGWKGRKDLRDLLVCSIDP 545
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
D+DDAL +L +G VGVHIADVS+FV P A+D EA R T+VY++ ++I ML
Sbjct: 546 VGCVDIDDALHATKLPNGNFAVGVHIADVSHFVKPNNAMDKEASQRGTTVYLVDKRIDML 605
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P+LL ++ SL P V+R AFS+ W++ D+V ++VIRS SYE AQ ID K
Sbjct: 606 PMLLGTDLCSLKPYVERYAFSVLWEITPDADIVKSEFTKSVIRSREAFSYEQAQIRIDDK 665
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 468
+ D+ +++L +SK LK KR GAL L + + V
Sbjct: 666 -------------------SQQDDLTNGMRTLLMLSKKLKQKRMDAGALNLASPEVKVRT 706
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 528
E P D D N L EEFMLLAN + A AFP +ALLRRH AP E
Sbjct: 707 ESETSDPVDVETKKLLDTNSLVEEFMLLANISVAARNYEAFPQTALLRRHAAPPKTNFEE 766
Query: 529 F-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 586
K GL+L T SS SL+ + F+ L+ ATR M A YFC+G
Sbjct: 767 LGNQLKIKKGLELKTDSSKALADSLDTC---VDPKNPFFNTLVRIMATRCMMSAEYFCAG 823
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
+ ++ HY LA +YTHFTSP+RRY DL HR L AA+E E+L
Sbjct: 824 T-QAYPEFRHYGLASEIYTHFTSPIRRYADLEAHRQLAAAIEYEQL 868
>gi|326926869|ref|XP_003209619.1| PREDICTED: DIS3-like exonuclease 1-like [Meleagris gallopavo]
Length = 1054
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 195/657 (29%), Positives = 324/657 (49%), Gaps = 87/657 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTG+VV II+++ RD +V F SR++++ + + I +TP
Sbjct: 327 PTGKVVGIIQKN-WRDYVVTF-----------PSREESQSQGR-----NAQKILVTPWDY 369
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A E +V RID W S +P H + V GR G++
Sbjct: 370 RIPK-----------IRISTQQAEALQEYRVVV-RIDSWESTSVYPNGHFVRVLGRIGDL 417
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 290
E +I AIL EN+I + FS ++ +P PW+V EE R +LR+ +F+IDP
Sbjct: 418 EGEIAAILVENSISVAPFSEIQMNEMPVSSSKNPWKVNPEEEKKRLNLRDTHLVFSIDPK 477
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDALS+ L +G +GVHIADV++FV + D+EA+ R+T+ Y+ R+ MLP
Sbjct: 478 GCEDVDDALSVRTLPNGNLELGVHIADVTHFVAANSYTDVEARARATTYYLADRRYDMLP 537
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W+L +++ +++IRS KL YE AQ ++DG
Sbjct: 538 SVLSADICSLLSGVDRYAVSVLWELERESFEILRVCYNKSIIRSAYKLVYEVAQGLLDGD 597
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
V + + + + S++V +I L ++++ ++ KR + GAL LE +
Sbjct: 598 ASVVDDILELKDLDERTREKKLSELVWAISKLTDIARHMRAKRDSCGALELEGVEIRVQL 657
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I+ +FP ALLR+HP P +
Sbjct: 658 DDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKISESFPHQALLRQHPPPRQEFFTDL 717
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
+ S G +DT S+ +SL++A + L D ++ +L + AT M A YF +G
Sbjct: 718 QECASAKGFSIDTRSNKALAESLDKADDPL--DPIVNRLLRSMATHAMSNALYFSTGSCS 775
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA E K +
Sbjct: 776 EE-EFHHYGLALDKYTHFTSPIRRYADIVVHRLLMAATLKETKDVKDK------------ 822
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
+F +KD E + H N+R A ++ +
Sbjct: 823 -------LFSNKDLEE-------------------------LCKHINNRNRAAQHAQKQS 850
Query: 710 VKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +++ + ++ + +++ + I+ Y EGL++
Sbjct: 851 TELFQCMYFKDKSPETDERCIADGVIYSIRTNGVLVFVPRYGIKGAAYMKNKEGLVL 907
>gi|213408713|ref|XP_002175127.1| mitotic control protein dis3 [Schizosaccharomyces japonicus yFS275]
gi|212003174|gb|EEB08834.1| mitotic control protein dis3 [Schizosaccharomyces japonicus yFS275]
Length = 969
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 181/529 (34%), Positives = 266/529 (50%), Gaps = 65/529 (12%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PT RVV I++R+ W Y G + NR+ S ++ + LTP
Sbjct: 360 PTARVVGILKRN--------------WRPYVGHVDMASVANRTGSS---QQSVLLTPMDR 402
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + + +R + +D W+ +S +P+ H + G
Sbjct: 403 RVPKIRFRTRQISRLLGQR------------IVVSVDNWDIDSRYPEGHFVRALGEMETK 450
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDP 289
E + A+L E + F L CLP W VPQ++ R D R + +IDP
Sbjct: 451 EAETEALLLEYDVQYRPFPKSVLDCLPAEGHEWRVPQDKSDPLWHKRADFRELLVCSIDP 510
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
D+DDAL L +G VGVHIADV++FV P TA+D EA R T+VY++ ++I ML
Sbjct: 511 PGCQDIDDALHARPLPNGNYEVGVHIADVTHFVKPSTAMDAEASSRGTTVYLVDKRIDML 570
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P+LL ++ SL P ++R AFS W+++ +VV+ ++VI S SY AQ ID K
Sbjct: 571 PMLLGTDLCSLRPRIERFAFSCIWEMDENANVVNVSFTKSVISSKEAFSYAEAQARIDDK 630
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 468
++ + L EG ++ L +SK LK +R +GAL L + + V +
Sbjct: 631 ---KAQDPLTEG----------------MRILLRLSKKLKQRRLDNGALNLASPEVKVQM 671
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP---NMRK 525
+E P D + + N L EEFMLLAN + A+ I FP +A+LRRH AP N
Sbjct: 672 DNETSDPMDIEIKQLLETNSLVEEFMLLANISVAQKIYETFPQTAVLRRHAAPPASNFEA 731
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFC 584
L++ C +QL SS SL++ + D Y F+ L+ TR M A YFC
Sbjct: 732 LQDILHVCK--DMQLKCDSSKALAHSLDECSDN-ADPY--FNTLLRILTTRCMLSAEYFC 786
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
SG F D+ HY LA P+YTHFTSP+RRY D++ HR L A+++ E L+
Sbjct: 787 SGTFA-YPDFRHYGLASPIYTHFTSPIRRYADVLAHRQLAASIDYETLH 834
>gi|148226384|ref|NP_001086021.1| DIS3-like exonuclease 1 [Xenopus laevis]
gi|49119586|gb|AAH73711.1| MGC83653 protein [Xenopus laevis]
Length = 961
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 267/518 (51%), Gaps = 41/518 (7%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++R+ RD +V F K + + + + + P
Sbjct: 246 PTGRVVGIMQRN-WRDYVVTF----------------PAKEDTETQGKNTQKVLVMPWDY 288
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A ++ V RID W S +P H + GR G +
Sbjct: 289 RIPK-----------IRISTQQAEA-LQNYRVVVRIDSWESNSLYPNGHFVRALGRAGNL 336
Query: 236 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I + FS L+ +P PW+V EE R DLR +F+IDP
Sbjct: 337 EAEIATILVENSISLNPFSEAQLAEMPSNTHENPWQVKPEE-GDRLDLRETHLVFSIDPK 395
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDALSI L G +GVHIADV++FV T DIEA+ R+T+ Y+ R+ MLP
Sbjct: 396 GCEDVDDALSIRVLPSGDLELGVHIADVTHFVQHNTYTDIEARSRATTYYLADRRNDMLP 455
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDIIDGK 409
++LS ++ SL VDR A S+ W+++ + + R W GRT+IRS KLSYE AQ ++DG
Sbjct: 456 LILSADLCSLLGAVDRYAVSVIWEMDCSTYEIRRVWYGRTIIRSSYKLSYEVAQQLLDG- 514
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
D+E +T E P ++ ++ + EV+ + +R GAL LE +
Sbjct: 515 -DLEPLSTEKELHPLKQDPARLQQLLWAVGKMTEVAHATRMRRNMSGALELEGVEVRVQL 573
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
E + D V ++ E M+LAN A+ I ++P ALLR HP P +E
Sbjct: 574 GEKHSIDDLVPKQPLQVHETIAECMILANHWVAKKIWESYPQHALLRLHPPPRQEFFQEL 633
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
+ G +DT S+ SL+QA + D ++ +L AT+ M A YF +G +
Sbjct: 634 KECAKARGFSIDTRSNKALADSLDQAHD--PSDPLVNQLLRMMATQAMSNARYFSTGSYT 691
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
+D ++ HY LA YTHFTSP+RRY D+VVHR L AA+
Sbjct: 692 ED-EFYHYGLALEKYTHFTSPIRRYADIVVHRLLLAAV 728
>gi|398410804|ref|XP_003856750.1| exosome complex exonuclease DIS3 [Zymoseptoria tritici IPO323]
gi|339476635|gb|EGP91726.1| hypothetical protein MYCGRDRAFT_67423 [Zymoseptoria tritici IPO323]
Length = 993
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 193/570 (33%), Positives = 281/570 (49%), Gaps = 67/570 (11%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
N + + DS+E +++ ++ + + + + +PT +VV II+R+
Sbjct: 342 NDNAENEDDSSEALTTEKERKALQEEAKRAHGKVNEGKPQPTAKVVGIIKRN-------- 393
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
W Y G KD+ K+ + S ++ + L P + PK+ V + + + KR
Sbjct: 394 ------WRQYVGHIDKDSVKSGAKQS-RSQQTVFLVPMDKRIPKIRVRTRQAGELLGKR- 445
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCS 251
V ID W+ ES +P H + G +G E E A+L E +
Sbjct: 446 -----------VLVTIDSWDRESRYPVGHFIRSLGELETKGAETE----ALLLEWDVQYR 490
Query: 252 GFSPESLSCLPCV--PWEVPQEEL----LSRKDLRNFCIFTIDPSTATDLDDALSIERLS 305
F L CLP W+VP ++ R+DLR+ + +IDP D+DDAL +L
Sbjct: 491 PFPKTVLDCLPAEGHDWKVPVDKADPGWKGRQDLRDLLVCSIDPPGCVDIDDALHAVKLP 550
Query: 306 DGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVD 365
+G +VGVHIADVS+FV P A+D EA +R T+VY++ ++I MLP+LL ++ SL P V+
Sbjct: 551 NGNFQVGVHIADVSHFVKPNNAMDKEASLRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVE 610
Query: 366 RLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQL 425
R AFS+ W++N D+++ ++VIRS SYE AQ ID DV + L +G
Sbjct: 611 RYAFSVLWEVNENADIINSTFTKSVIRSREAFSYERAQLRID---DVSQQDELTQG---- 663
Query: 426 YGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGRE 484
++ L +SK L+ KR GAL L + + + E P D
Sbjct: 664 ------------MRYLMMLSKKLRAKRMAAGALNLASPEVRIETESETSDPVDVKTKQLL 711
Query: 485 DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTS 543
D N L EEFMLLAN + A AFP +ALLRRH AP E K L++ T
Sbjct: 712 DTNQLVEEFMLLANISVAGKNYEAFPQTALLRRHGAPPKTNFEELSNQLKVKKNLEIRTD 771
Query: 544 SSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFP 602
SS SL+ + F+ L+ ATR M A YFCSG + ++ HY LA
Sbjct: 772 SSKALADSLDTC---VDPQNPFFNTLVRILATRCMMSAEYFCSGT-QAYPEFRHYGLASE 827
Query: 603 VYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
+YTHFTSP+RRY DL HR L AA++ E L
Sbjct: 828 IYTHFTSPIRRYADLEAHRQLAAAIDYEPL 857
>gi|242005176|ref|XP_002423448.1| Exosome complex exonuclease RRP44, putative [Pediculus humanus
corporis]
gi|212506526|gb|EEB10710.1| Exosome complex exonuclease RRP44, putative [Pediculus humanus
corporis]
Length = 957
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 180/522 (34%), Positives = 266/522 (50%), Gaps = 73/522 (13%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
K+PTG +V II+R +W Y G N+S L R P
Sbjct: 328 KKPTGIIVGIIKR--------------KWRQYCGIL------NKSLLENATRHI--FVPA 365
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
K PK+ ++ K + + + ++V ID W P P G
Sbjct: 366 ERKIPKVRIITK-----------QSEFLMSQKIVVV-IDSW----PRP----------IG 399
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ E + +L E+ + S FS LS LP +PW + +++L +R DLR+ I ++DP T
Sbjct: 400 DKETENEVLLLEHDVPHSKFSEAVLSFLPELPWIITEDDLKNRVDLRHLDICSVDPPGCT 459
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL +L +G VG+HIADV++F+ PGTALD EA +R T+VY++ ++I M+P LL
Sbjct: 460 DIDDALHCRKLDNGNFEVGIHIADVTHFIKPGTALDKEAALRGTTVYLVDKRIDMVPELL 519
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL DR AFS ++ G +++ ++VIRS ++YE AQ ID K
Sbjct: 520 SSNLCSLRENEDRFAFSCIVEMTKKGKILNTKFHKSVIRSRKAMTYEEAQLKIDDK---- 575
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
+ +V +S++ L ++KI+K KR +GAL L + + FL D E
Sbjct: 576 ---------------KQNDNVTQSLRWLNNLAKIIKKKRLDNGALVLASPEVKFLMDSET 620
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P D D N + EEFMLLAN + AE I + FP+ A+LRRHP P +
Sbjct: 621 HDPLDVEAKKIRDTNSMIEEFMLLANISVAEKIFKDFPECAVLRRHPKPPLSNFEPLIKA 680
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 591
+ + SLE+A +K + F+ ++ ATR M A YF SG FK++
Sbjct: 681 GRVQNFDISVDTGKSLSVSLEKA---VKPNNPYFNTMLKILATRCMMQAVYFSSGMFKEE 737
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
D+ HY LA P+YTHFTSP+RRY D++VHR L ++ A+ Y
Sbjct: 738 -DFFHYGLACPIYTHFTSPIRRYADIIVHRLLAVSVNADSTY 778
>gi|166201906|sp|Q6GN11.2|DI3L1_XENLA RecName: Full=DIS3-like exonuclease 1
Length = 1040
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 182/518 (35%), Positives = 267/518 (51%), Gaps = 41/518 (7%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++R+ RD +V F K + + + + + P
Sbjct: 325 PTGRVVGIMQRN-WRDYVVTF----------------PAKEDTETQGKNTQKVLVMPWDY 367
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A ++ V RID W S +P H + GR G +
Sbjct: 368 RIPK-----------IRISTQQAEA-LQNYRVVVRIDSWESNSLYPNGHFVRALGRAGNL 415
Query: 236 EPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I IL EN+I + FS L+ +P PW+V EE R DLR +F+IDP
Sbjct: 416 EAEIATILVENSISLNPFSEAQLAEMPSNTHENPWQVKPEE-GDRLDLRETHLVFSIDPK 474
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDALSI L G +GVHIADV++FV T DIEA+ R+T+ Y+ R+ MLP
Sbjct: 475 GCEDVDDALSIRVLPSGDLELGVHIADVTHFVQHNTYTDIEARSRATTYYLADRRNDMLP 534
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDIIDGK 409
++LS ++ SL VDR A S+ W+++ + + R W GRT+IRS KLSYE AQ ++DG
Sbjct: 535 LILSADLCSLLGAVDRYAVSVIWEMDCSTYEIRRVWYGRTIIRSSYKLSYEVAQQLLDG- 593
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
D+E +T E P ++ ++ + EV+ + +R GAL LE +
Sbjct: 594 -DLEPLSTEKELHPLKQDPARLQQLLWAVGKMTEVAHATRMRRNMSGALELEGVEVRVQL 652
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
E + D V ++ E M+LAN A+ I ++P ALLR HP P +E
Sbjct: 653 GEKHSIDDLVPKQPLQVHETIAECMILANHWVAKKIWESYPQHALLRLHPPPRQEFFQEL 712
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
+ G +DT S+ SL+QA + D ++ +L AT+ M A YF +G +
Sbjct: 713 KECAKARGFSIDTRSNKALADSLDQAHD--PSDPLVNQLLRMMATQAMSNARYFSTGSYT 770
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
+D ++ HY LA YTHFTSP+RRY D+VVHR L AA+
Sbjct: 771 ED-EFYHYGLALEKYTHFTSPIRRYADIVVHRLLLAAV 807
>gi|406663904|ref|ZP_11071913.1| Ribonuclease R [Cecembia lonarensis LW9]
gi|405551826|gb|EKB47447.1| Ribonuclease R [Cecembia lonarensis LW9]
Length = 731
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/430 (36%), Positives = 231/430 (53%), Gaps = 38/430 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V +I EW EE P ++ V G+ GE E +I++I+ E + + E +P
Sbjct: 202 VVVKITEWREEDKNPTGKIVRVLGKAGEHEVEIHSIMAEFGLPFE-YPQEIEEEANAIPE 260
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
E+P +E+ +R+D+R+ FTIDP A D DDA+S +L +G +GVHIADV+++V P T
Sbjct: 261 EIPTDEIKNRRDMRDIPTFTIDPVDAKDFDDAISYRKLENGNYEIGVHIADVTHYVKPKT 320
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
L+ EA R+TSVY++ R IPMLP LS + SL P D+L FS ++++ DV++ WI
Sbjct: 321 KLEQEAYDRATSVYLVDRTIPMLPERLSNGLCSLRPNEDKLTFSCVFEMDENADVLNHWI 380
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
GRTV S + +YE AQ+ ID + EG D + + L E++K
Sbjct: 381 GRTVTHSDRRFAYEEAQENIDKQ----------EG-----------DFYQELTFLNELAK 419
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI- 505
++ +RF GA+ E + F D+ G P ++ R+D++ L EEFMLLAN+T AE I
Sbjct: 420 KIRKRRFDKGAINFETVEVKFKLDDKGIPLGLMIKERKDIHKLIEEFMLLANRTVAEFIY 479
Query: 506 -ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV 564
D+ + R H P++ KL F F + G + S + ++L Q L D+ V
Sbjct: 480 NRNKGKDTFVYRIHDFPDIEKLETFSTFAKRFGHDIKISEGTKISKALNQ----LMDEIV 535
Query: 565 ---LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
++L A R M A Y H+ LAF YTHFTSP+RRYPD++VHR
Sbjct: 536 GKPEQNVLEQLAIRSMAKAKYTTEPK-------SHFGLAFKHYTHFTSPIRRYPDMMVHR 588
Query: 622 TLNAALEAEK 631
L L+ K
Sbjct: 589 LLQHYLDGGK 598
>gi|302925740|ref|XP_003054155.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735096|gb|EEU48442.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 983
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 189/531 (35%), Positives = 261/531 (49%), Gaps = 65/531 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT +VV +I+R+ R+ VG ++ + RK ++ + L P
Sbjct: 374 QPTAKVVGVIKRNWRQ--YVGHIDPSSASKASSQGRK-------------QDSVFLIPMD 418
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
K PK+ + + + D + KRL LV ID W +S P H + G
Sbjct: 419 KKIPKIRLRTRQVSDLLGKRL----------LVT--IDAWERDSRHPIGHFVRSLGELET 466
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDLRNFCIFTID 288
+ A+L E + F L CLP VP V R+DLR I +ID
Sbjct: 467 KAAETEALLLEWDVQYRPFPKTVLDCLPKEGHDWKVPASVEDPGWRQREDLRGLLICSID 526
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P D+DDAL +L +G VGVHIADVS+FV P A+D EA +R T+VY++ ++I M
Sbjct: 527 PPGCQDIDDALHARKLPNGNFEVGVHIADVSHFVKPANAMDTEASIRGTTVYLVDKRIDM 586
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP LL ++ SL P V+R AFS+ W+LN D+V ++VI+S SYE AQ ID
Sbjct: 587 LPPLLGTDLCSLKPYVERYAFSVLWELNDNADIVSARFTKSVIKSREAFSYEQAQLRID- 645
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVF 467
+ + D+ + ++ L +SK LK KR GAL L + + V
Sbjct: 646 ------------------DESQQDDLTKGMRMLLMLSKKLKQKRMDAGALSLSSPEVKVQ 687
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
E P D D N L EEFML AN + A I AFP +A+LRRH AP
Sbjct: 688 TESETSDPIDVKTKQLLDTNSLVEEFMLFANVSVAAKIYEAFPQTAILRRHAAPPKTNFD 747
Query: 528 EF-EAFCSKHGLQLDTSSSGQFHQSLEQ---AREKLKDDYVLFDILIN-YATRPMQLASY 582
E +K GL+L T SS SL+Q A+E F+ L+ ATR M A Y
Sbjct: 748 ELANQLRTKRGLELRTDSSKALADSLDQCVDAKEP------FFNTLVRIMATRCMMSAEY 801
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
FCSG + ++ HY LA +YTHFTSP+RRY DL+ HR L AA++ E ++
Sbjct: 802 FCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLLAHRQLAAAIDYEAVH 851
>gi|407859723|gb|EKG07119.1| mitochondrial exoribonuclease DSS-1, putative [Trypanosoma cruzi]
Length = 966
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 183/526 (34%), Positives = 270/526 (51%), Gaps = 54/526 (10%)
Query: 116 PTGRVVSI--IERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
P G+VV I +ER P G ++V + +R A + + S +V + P
Sbjct: 328 PVGKVVGITSMERRP----FCGSIDVEEL------TRLTASEGKISGAVS----VLFQPK 373
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ P++ + +DL KRL + ID+W E + FP H + V G G
Sbjct: 374 DNRIPRIRISTRDLEYLKDKRL------------SVVIDDWPEYNSFPVGHYVEVLGTIG 421
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ + + IL EN + FS CLP W V ++EL R DLR+ C+ ++DP
Sbjct: 422 DKDTEAKVILLENDVPHYDFSEAVYDCLPKGQWSVSKDELERRLDLRDLCVVSVDPLGCR 481
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL +++ VGVHIADV++F+ TA+D EA RSTSVY++ R+I MLP LL
Sbjct: 482 DIDDALHCRVVNENHLEVGVHIADVTHFLHENTAMDEEAAKRSTSVYLVDRRINMLPQLL 541
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
+E + S+ DR AFSI W+ + +VV + G+TVIRS L Y AQ +ID DV
Sbjct: 542 TENLCSIVSNEDRYAFSILWEFDEKYNVVRDYFGKTVIRSRAALYYGDAQRMID---DVN 598
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF-LFDEY 472
S++ S++ L ++S+ K R DGAL L + + F + +++
Sbjct: 599 DK----------------SEIAVSLRHLMDISRHFKAMREKDGALFLASQEFKFKVENDH 642
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EA 531
P D + + N + EE+ML AN AA + ++P LLRRH P EA
Sbjct: 643 VNPTDMQVYQTFEANSMIEEWMLFANAAAARKVYESYPRWTLLRRHQRPAENAFDNLNEA 702
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
K GL+LD ++S + SL + D F+ LI TR ++ A YF S +
Sbjct: 703 LERKLGLRLDDTTSLTLNTSLNTC---IDPDDAYFNQLIRILVTRCLRQAQYFSSSEVSQ 759
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
D ++ H+ LA P+YTHFTSP+RRY D++VHR L AAL ++ KH
Sbjct: 760 D-EFYHFGLAMPIYTHFTSPIRRYADVIVHRQLAAALGIMQVSEKH 804
>gi|398017891|ref|XP_003862132.1| ribonuclease II-like protein, putative [Leishmania donovani]
gi|322500361|emb|CBZ35438.1| ribonuclease II-like protein, putative [Leishmania donovani]
Length = 942
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 213/650 (32%), Positives = 323/650 (49%), Gaps = 90/650 (13%)
Query: 112 PTKRPTGRVVSIIERS-PRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL 170
P KRP GRV+ I++R PR V + NQ +G + ++ Y +
Sbjct: 155 PEKRPLGRVIRILKRCLPRLH--VARIADNQVHPGEG--------------LQEKYYYRF 198
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEME-------LVAARIDEWNEESPFPQA 223
P + YP++ V D+ + + ++ +E L R+ P A
Sbjct: 199 RPFNQLYPQLTVQGCDIMAAYHANISTSLFSLALEHGENGEILTTPRV---------PNA 249
Query: 224 HVLHVFGRGGEVEPQINAILYENAICCS------GFSPESLSCLPCVPWEVPQEELLS-- 275
+ V G+ A +AIC S FS E+ +C+ + +P L+
Sbjct: 250 LLCKVHSFLGDASTMAVA---SHAICTSCNVSNEPFSEEAEACV-LKDFTIPSPAELADM 305
Query: 276 -RKDLRNF-CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 333
R+DLR+ + TIDP+TA DLDDALSI+ DG VGVHIADVS+FVLP TALD EAQ
Sbjct: 306 GRRDLRDSEFVLTIDPATARDLDDALSIKPRKDGGYHVGVHIADVSHFVLPRTALDEEAQ 365
Query: 334 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD--------RW 385
RS S Y++ R IPMLP LSEE SLNPG D+ AFS ++ + G ++ W
Sbjct: 366 RRSNSTYLVDRVIPMLPSRLSEEYCSLNPGEDKFAFSGLFEFDRDGHLISEAATGEKCEW 425
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGK----FDV-ESSNTLGEGWPQLYGQFEWSDVVRSIKS 440
G++VIRS C+L+YE AQ I+DG DV ++++ LG G + V +S+ +
Sbjct: 426 FGQSVIRSRCRLAYEQAQQILDGDDTVVLDVAQAASDLGIG-----EEAARKKVKQSVTN 480
Query: 441 LYEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGRE-DLNFLFEEFMLLA 497
L+ ++ L+ + DG + + N++ F FD E +P S + N+L EEFMLLA
Sbjct: 481 LFALASKLRQQSLRDGRVVIGNTRLAFRFDRNEVNSPPTSFFVQEQIQANWLVEEFMLLA 540
Query: 498 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 557
N+ A+ I + P ALLRRH P +K+R S GL SS + + ++ ++
Sbjct: 541 NQRVAQKIVQYIPYGALLRRHKPPQPQKMRRLRTALSHRGLPTGGSSGQELQRMIDTIKK 600
Query: 558 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
+ D+ L+ Y+ +A+ + + D + H+A+A P YTHFTSP+RRY DL
Sbjct: 601 DHRGDFHTVCELLKYSL----MAAEYIANDPTEKDIRSHFAVAAPWYTHFTSPIRRYCDL 656
Query: 618 VVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAE--SLEGREAL-S 674
+VHR L ALE E+ + + +P H + R IF A + L+ RE
Sbjct: 657 MVHRQLRVALELERCMEEAQMEMPNAPH-PALETRPGDCIFDPTRAVDVHKLKTRELFYP 715
Query: 675 VAALKYGVPCADILVNVATHCNDRKLACRNVKDACVK----LYMWILLKK 720
++AL++ + TH N+ +L R+ D ++ LY+ L K+
Sbjct: 716 LSALEH----------IVTHANECRLNSRSAGDMSLEYSLCLYLLALQKR 755
>gi|390945305|ref|YP_006409066.1| RNAse R [Belliella baltica DSM 15883]
gi|390418733|gb|AFL86311.1| RNAse R [Belliella baltica DSM 15883]
Length = 733
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 181/546 (33%), Positives = 270/546 (49%), Gaps = 74/546 (13%)
Query: 93 QQNDGMNAIERLSAMISSYPTKRPTGR----VVSIIERSPRRDGIVGFLNVNQWFNYKGG 148
++ D NA++ + YP K TGR V+ ++ERS RD VG + ++ F
Sbjct: 120 KEADLKNALDGDRVRVMVYPLKGHTGRMEGKVLELLERS--RDEFVGRVEISPRF----- 172
Query: 149 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVA 208
+ VPD + + + + V DL G A ++V
Sbjct: 173 ----------AFVVPDFKKM--------HHDIFVHKGDL----------GGAEHNQKVVV 204
Query: 209 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSC-LPCVPWE 267
++ EW E P V V G+ GE E +I++I+ E + PE ++ + E
Sbjct: 205 -KMTEWREGDKNPTGKVTRVLGKAGEHEVEIHSIMAEFGLPFE--YPEDITKEAEAISDE 261
Query: 268 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 327
+ +EE+ +RKD R FTIDP+ A D DDA+S L +G +GVHIADV+++V P T
Sbjct: 262 ISKEEIKNRKDFRGITTFTIDPADAKDFDDAISYRVLDNGNFEIGVHIADVTHYVKPKTG 321
Query: 328 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 387
L+ EA R+TSVY++ R IPMLP LS + SL P D+L FS ++++ DVV WIG
Sbjct: 322 LEKEAYDRATSVYLVDRTIPMLPERLSNGLCSLRPNEDKLTFSCVFEMDENADVVKHWIG 381
Query: 388 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 447
RTVI S + +YE AQ+ ID + D + L +++K
Sbjct: 382 RTVIHSDRRFAYEQAQENIDN---------------------QSGDFFEELTFLNDMAKK 420
Query: 448 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-- 505
L+ +RF GA+ E + F DE GTP + R+D++ + EEFMLLAN+T AE I
Sbjct: 421 LRRRRFDKGAVNFETVEVKFQLDEKGTPLGLFVKERKDIHKMIEEFMLLANRTVAEFIFD 480
Query: 506 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVL 565
D+ + R H P++ +L F F K G ++ + ++L Q ++++
Sbjct: 481 KNKGADTFVYRVHDHPDLERLETFSNFAKKFGHEIKVGEGNRISKALNQLMDEIQGKPEQ 540
Query: 566 FDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 625
++L A R M A Y GH+ LAF YTHFTSP+RRYPD++VHR L
Sbjct: 541 -NVLEQLAIRSMAKAIYTVEPK-------GHFGLAFKHYTHFTSPIRRYPDMMVHRLLQH 592
Query: 626 ALEAEK 631
L+ K
Sbjct: 593 YLDGGK 598
>gi|258568742|ref|XP_002585115.1| mitotic control protein dis3 [Uncinocarpus reesii 1704]
gi|237906561|gb|EEP80962.1| mitotic control protein dis3 [Uncinocarpus reesii 1704]
Length = 1042
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 191/560 (34%), Positives = 277/560 (49%), Gaps = 66/560 (11%)
Query: 84 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 143
+ E V + ++ + R + S+ +PT RVV +I+R+ R+ VG
Sbjct: 349 EENEAVVTEKERRALQEDVRKAHGTSAEGRAQPTARVVGVIKRNWRQ--YVG-------- 398
Query: 144 NYKGGS-RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
N GGS +A R ++ + + P + PK+ + + + + +R
Sbjct: 399 NIDGGSFSAEASSGRR------QQTVFVIPMDKRVPKIRIRTRQASELLGQR-------- 444
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP 262
+ ID W+ +S +P H + G + A+L E + FS L+CLP
Sbjct: 445 ----ILITIDSWDRDSRYPTGHYVRSLGELETKAAETEALLLEYDVQYKPFSQAVLNCLP 500
Query: 263 --CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIA 316
W+VP+ RKDLR+ + +IDP D+DDAL L +G VGVHIA
Sbjct: 501 PEGHDWKVPESLNDPLWKDRKDLRDLLVCSIDPPGCQDIDDALHARPLPNGNFEVGVHIA 560
Query: 317 DVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN 376
DVS+FV P ++D EA +R T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W++
Sbjct: 561 DVSHFVRPNNSMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVERFAFSVIWEMT 620
Query: 377 SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVR 436
++V ++VI S SYE AQ ID Q + D+ +
Sbjct: 621 PDAEIVSANFTKSVIFSKEAFSYEQAQLRID-------------------DQSKNDDLTQ 661
Query: 437 SIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRE----DLNFLFEE 492
+++L +SK L+ KR GAL L + P + D V + D N L EE
Sbjct: 662 GMRTLLRLSKTLRQKRMDAGALNL--ASPEVRIEAESELNDPVADVKTKALLDTNSLVEE 719
Query: 493 FMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQFHQS 551
FMLLAN T A I +AFP +ALLRRH P + + A S K G LD SSS S
Sbjct: 720 FMLLANITVASRIYQAFPQTALLRRHATPPPQNFEQLIAQLSKKRGFSLDVSSSLALATS 779
Query: 552 LEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSP 610
L++ + F+ LI ATR M A YFC+G +T++ HY LA P+YTHFTSP
Sbjct: 780 LDKC---VDPSNPFFNTLIRILATRCMTSAEYFCAGAHA-ETEFRHYGLASPIYTHFTSP 835
Query: 611 LRRYPDLVVHRTLNAALEAE 630
+RRY DLVVHR L AA+ E
Sbjct: 836 IRRYADLVVHRQLAAAIGYE 855
>gi|167754476|ref|ZP_02426603.1| hypothetical protein ALIPUT_02772 [Alistipes putredinis DSM 17216]
gi|167659101|gb|EDS03231.1| ribonuclease R [Alistipes putredinis DSM 17216]
Length = 757
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 228/435 (52%), Gaps = 44/435 (10%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V RI +W S P ++ V GR GE +++AIL E + F + +P
Sbjct: 189 VVIRITDWALGSKSPAGELVEVLGRAGENNTEMHAILAEYGLPYH-FEQKVEDAAQAIPS 247
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+ + + +R+D R FTIDP+ A D DDALSI ++ DG+ VGVHIADV+++V P +
Sbjct: 248 TITKADYAARRDFRKITTFTIDPADAKDFDDALSIRKIEDGVWEVGVHIADVTHYVQPRS 307
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
+D EA+ R TSVY++ R IPMLP LS E+ SL P + L FS + LN +V+D+W
Sbjct: 308 VIDTEAEERGTSVYLVDRTIPMLPEKLSNELCSLRPDEESLCFSAVFTLNEEAEVLDKWF 367
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
GRTVI S + +YE AQ II+ G+G D + +L +++
Sbjct: 368 GRTVILSDRRFTYEEAQQIIE----------TGKG-----------DFAEEVLTLNRLAQ 406
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE--- 503
++ RF GA+ + + F D G P +++ N L EEFMLLANK AE
Sbjct: 407 RMRKTRFKRGAVSFQREEAKFKLDAEGKPLGVYFKEQKEANQLIEEFMLLANKQVAEFCG 466
Query: 504 ---VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS----SGQFHQSLEQAR 556
V RA + + R H PN KL +F F + G + + ++ L QA+
Sbjct: 467 HHKVNGRAVRRTMVYRVHDVPNEEKLEKFRTFVLRFGYVFKADKGRAVAKEMNKLLGQAK 526
Query: 557 EKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 616
++++ +++ N A R M A F S D + GHY LAFP YTHFTSP+RRYPD
Sbjct: 527 GRIEE-----NVISNLAVRAMSKA--FYSTD-----NIGHYGLAFPYYTHFTSPIRRYPD 574
Query: 617 LVVHRTLNAALEAEK 631
++VHR L LE K
Sbjct: 575 MMVHRLLARYLEGGK 589
>gi|452848354|gb|EME50286.1| hypothetical protein DOTSEDRAFT_145035 [Dothistroma septosporum
NZE10]
Length = 991
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 191/531 (35%), Positives = 265/531 (49%), Gaps = 67/531 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV +++R+ R+ VG ++ K R AK++R+ ++ + L P
Sbjct: 380 QPTARVVGVVKRNWRQ--YVGHID-------KDSVRSGAKQSRA------QQTVFLIPMD 424
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK+ V + D + KR V ID W+ ES +P H + G
Sbjct: 425 KRIPKVRVRTRQAGDLLGKR------------VLVTIDSWDRESRYPVGHFIRSLGELET 472
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDLRNFCI 284
+G E E A+L E + F L CLP VP ++ R+DLR I
Sbjct: 473 KGAETE----ALLLEWDVQYRPFPKSVLDCLPAEGHDWRVPVDMSDSGWRGRRDLREQLI 528
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL ++L +G VGVHIADVS+FV P A+D EA +R T+VY++ +
Sbjct: 529 CSIDPPGCVDIDDALHAKQLPNGNFEVGVHIADVSHFVKPNNAMDKEASLRGTTVYLVDK 588
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP+LL ++ SL P V+R AFS+ W+L+ ++V ++VI+S SYE AQ
Sbjct: 589 RIDMLPMLLGTDLCSLKPYVERYAFSVLWELDQNANIVSASFTKSVIKSREAFSYEQAQL 648
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
ID K + D+ ++ L +SK L+ KR GAL L + +
Sbjct: 649 RIDDK-------------------SQQDDLTNGMRHLMMLSKKLRAKRMAAGALNLASPE 689
Query: 465 -PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
V E P D D N L EEFMLLAN + A AFP +ALLRRH AP
Sbjct: 690 VRVETESETSDPVDVKTKQLLDTNQLVEEFMLLANISVAGKNYAAFPQTALLRRHAAPPK 749
Query: 524 RKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
E K GL+L T SS SL+ + + F+ L+ ATR M A
Sbjct: 750 NNFEELSNQLKVKKGLELRTDSSKALADSLDTCTDA---ESPFFNTLVRILATRCMMSAE 806
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
YFCSG + ++ HY LA +YTHFTSP+RRY DL HR L AA+E E L
Sbjct: 807 YFCSGT-QAYPEFRHYGLASGIYTHFTSPIRRYADLEAHRQLAAAIEYEPL 856
>gi|449544190|gb|EMD35164.1| hypothetical protein CERSUDRAFT_116633 [Ceriporiopsis subvermispora
B]
Length = 992
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 189/543 (34%), Positives = 265/543 (48%), Gaps = 69/543 (12%)
Query: 106 AMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVP 163
A I S K+PTGR+V II+R+ W +Y S N +SLS
Sbjct: 365 ASIRSLSAKQPTGRIVGIIKRN--------------WRSYVCHIESTSLMSSNPTSLS-- 408
Query: 164 DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 223
++ + TP P++ + + P T+ + + ID W+ S +P
Sbjct: 409 -QQTVFATPVSRLLPRIRMRTRQAP------------TLLGQKILVTIDRWDATSRYPDG 455
Query: 224 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE-----ELLSR 276
H + GR E + ++L E + F L CLP W VP + E R
Sbjct: 456 HFVRALGRAESKEAEQESLLLEYDVPYRPFGKAILDCLPSEGDAWVVPPKADAVPEWKDR 515
Query: 277 KDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRS 336
+DLR I +IDP D+DDAL L +G GVHIADVS+FV P T +D EA R
Sbjct: 516 EDLRGLIICSIDPPGCQDIDDALHARPLPNGNIEAGVHIADVSHFVHPDTPMDNEAAARG 575
Query: 337 TSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCK 396
++VY++ ++I MLP LL + SL P V+RLAFS+ W+L D+V+ ++VI S
Sbjct: 576 STVYLVDKRIDMLPSLLGTNLCSLRPHVERLAFSVIWELTPEADIVNVRFTKSVIASKSA 635
Query: 397 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 456
+Y+ AQ D P L D+ +SI+ L +++ LK R G
Sbjct: 636 FTYDEAQVRKDD--------------PNLN-----DDLTKSIRLLNSLAQKLKAGRMAAG 676
Query: 457 ALRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSAL 514
AL L + + D E P D ++ N L EEFMLLAN + A+ I FP +A+
Sbjct: 677 ALNLASPEVKIHLDSAESSDPIDVEQKVLKETNSLVEEFMLLANISVAQKIQETFPQTAV 736
Query: 515 LRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN 571
LRRH P N KL++ + G+ LD SSSG SL+Q + + F+ L+
Sbjct: 737 LRRHLPPPPTNFEKLKDI--LQKRKGMTLDVSSSGALAASLDQC---VDLEEPAFNTLVR 791
Query: 572 -YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
TR M A YFCSG DT +GHY LA P+YTHFTSP+RRY D++ HR L AA+
Sbjct: 792 IMTTRCMLSAEYFCSGSVARDT-FGHYGLASPIYTHFTSPIRRYADVLAHRQLAAAINFS 850
Query: 631 KLY 633
L+
Sbjct: 851 PLH 853
>gi|320589376|gb|EFX01838.1| exosome complex exonuclease exoribonuclease [Grosmannia clavigera
kw1407]
Length = 1030
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 188/529 (35%), Positives = 266/529 (50%), Gaps = 63/529 (11%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PT RVV ++ R+ R+ VG +V+Q + R +E + + P
Sbjct: 396 PTARVVGVVRRNWRQ--FVG--HVDQTSVSVSSLSASGGQGRK------QETVFVMPMDK 445
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
K PKM + + KR+ LVA +D W+ +S P H++ G
Sbjct: 446 KLPKMRLRTRQAGTLAGKRI----------LVA--MDAWDRDSRHPVGHLVRALGELETK 493
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLS-----RKDLRNFCIFTID 288
+ A+L E + F L CLP W VP ++ + R+DLR + +ID
Sbjct: 494 AAETEALLLEYDVQYRPFPRTVLDCLPAEGHDWRVPADKETAAGWKNREDLRELLVCSID 553
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P D+DDAL +RL++G +VGVHIADVS+FV G+A+D EA VR T+VY++ ++I M
Sbjct: 554 PEGCQDIDDALHAKRLANGNWQVGVHIADVSHFVQAGSAMDAEASVRGTTVYLVDKRIDM 613
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP+LL ++ SL P ++R AFS+ W+L +VVD ++VIRS SYE AQ ID
Sbjct: 614 LPMLLGTDLCSLRPRIERFAFSVLWELTDTAEVVDVRFCKSVIRSREAFSYEQAQLRID- 672
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVF 467
D + L G +++L ++S++L+ +R GAL L + + V
Sbjct: 673 --DASQQDELTTG----------------MRALLKLSRLLRQRRMDAGALSLSSPEVKVH 714
Query: 468 LFDEYGTPYDSVLSGRE-------DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
L E P D+ SG D N L EEFMLLAN A + AFP +A+LRRH A
Sbjct: 715 LESETADPLDAN-SGTTVEAKALLDTNSLVEEFMLLANTAVAARVYEAFPQTAMLRRHAA 773
Query: 521 PNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 578
P E GL+L SS SL+ + +D F+ L+ ATR M
Sbjct: 774 PPAASFDELSRQLHVTRGLKLQHDSSRALADSLDAC---VDNDEPFFNTLVRILATRCMT 830
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
A YF +G ++ HY LA P+YTHFTSP+RRY DLVVHR L AA+
Sbjct: 831 AAEYFPAGALA-QPEFRHYGLATPIYTHFTSPIRRYADLVVHRQLAAAI 878
>gi|290995709|ref|XP_002680425.1| predicted protein [Naegleria gruberi]
gi|284094046|gb|EFC47681.1| predicted protein [Naegleria gruberi]
Length = 880
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 179/526 (34%), Positives = 272/526 (51%), Gaps = 79/526 (15%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
P GRVV+++ER+ W Y +++K N +Y+ P
Sbjct: 334 PVGRVVAVLERN--------------WREY-VACLEESKNNTG-------DYLLAIPIDS 371
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + K K LE M L+ RI +W ++S +P + + G G++
Sbjct: 372 RIPKIRIKTKQ-----KNVLEN------MRLIV-RISDWEKKSKYPSGYYVRTLGPIGDL 419
Query: 236 EPQINAILYENAICCSG--FSPESLSCLPCVP----WEVPQEELLSRKDLR-NFCIFTID 288
+ + +L EN + S FS +LS LP V +++PQ E+ R+D+R + +ID
Sbjct: 420 DTETEGLLVENQLFTSTLPFSDLALSELPPVSSGAEFKIPQAEIQKRRDIRKTHLVCSID 479
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P D+DDALS+++LS+G VGVHIADVSY++ LD+EA+ RST+VY++ R++ M
Sbjct: 480 PIGCEDIDDALSVKKLSNGNIEVGVHIADVSYYIKYDGYLDLEARRRSTTVYLIDRRLDM 539
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
+P LLS ++ S+ G DRL S+FW+ N G+VVD W GRT++ S L YE A +++
Sbjct: 540 IPTLLSADLCSIRQGQDRLCVSVFWEFNKEGEVVDTWYGRTILNSKYALHYEQADELLK- 598
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV-F 467
+ I +L ++ +++ KR DGAL L + + V F
Sbjct: 599 ---------------------------KDIGALQQLGTLIQKKRLKDGALELNDLEAVSF 631
Query: 468 LFDEYGTPYDSVLSGREDL--NFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
D P + ++DL + E+M+LAN A+ I +FP +A LRRHP P K
Sbjct: 632 KLDNAKNPVK--IETKDDLLIHHTVAEWMILANAYVAKKIYDSFPVAACLRRHPYPMKDK 689
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILI-NYATRPMQLASYFC 584
++ G ++D S SL++A E +D YV ++LI + TR M A YF
Sbjct: 690 FQQVIKVAGSRGFEIDLESGNSLSNSLDRA-EDPEDKYV--NLLIRSLTTRAMSEAEYFS 746
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
+G D D+ HY LA YTHFTSP+RRY D+VVHR L A+ E
Sbjct: 747 TGTLPVD-DFVHYGLALQFYTHFTSPIRRYADIVVHRLLLWAINNE 791
>gi|444731284|gb|ELW71642.1| DIS3-like exonuclease 2 [Tupaia chinensis]
Length = 615
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/497 (32%), Positives = 254/497 (51%), Gaps = 67/497 (13%)
Query: 267 EVPQEELLSRKDLRN--FCIFTIDPSTATDLDDALSIERLS--------DGISRVGVHIA 316
+ PQ ++ KD N F +D D+ ++E+L+ DG VGVHIA
Sbjct: 96 DCPQAFVMRPKDYTNTLFICHIVDWKE----DNNFALEQLAKSLGQPLPDGSFEVGVHIA 151
Query: 317 DVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN 376
DVSYFV G+ LD A R+TSVY++Q+ I MLP LL EE+ SLNP D+L FS+ W L
Sbjct: 152 DVSYFVSEGSDLDRVAAKRATSVYLVQKVIHMLPRLLCEELCSLNPMTDKLTFSVIWKLT 211
Query: 377 SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVR 436
G ++ W GRT+I SC KLSY+ AQ + D + S L P ++ + ++ +
Sbjct: 212 PEGKILAEWFGRTIIDSCAKLSYKLAQSMTDSTTEKISEEEL----PPIFPEHSSKEIHQ 267
Query: 437 SIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFML 495
++ + ++++ L+ +RF DG L L+ K F D + G P + + D N L EEFML
Sbjct: 268 AVLNPHKIANQLRRQRFVDGVLHLDQVKLAFTLDHKTGLPQECHVCEYRDSNKLVEEFML 327
Query: 496 LANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQA 555
L+N A I RAFP ALL RHP P + L++ E FC++ GL +D SS+G ++SL +
Sbjct: 328 LSNMVVAHKIHRAFPTQALLCRHPPPQTKMLKDLEEFCNQMGLPIDFSSAGTLNKSLTET 387
Query: 556 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
K ++L N ++PMQ+A YFCSG ++ + HYAL P+YTHF+SP+ +
Sbjct: 388 FGDNKYSLAWKEVLTNMCSQPMQMAVYFCSGVLRNQAQFWHYALNVPLYTHFSSPICHFA 447
Query: 616 DLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSV 675
D++VH L L ++L E+L+ + L
Sbjct: 448 DVLVHCLLATVLGYQELL---------------------------DVEPEALQKQAEL-- 478
Query: 676 AALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGP 735
CN R +A ++V++ L+ +L+K+ L EA V+ +
Sbjct: 479 -------------------CNSRHMASQHVQELSTSLFFAVLVKESGPLELEAMVMGILN 519
Query: 736 RFMTIYIEKLAIERRIY 752
+ + + + +++RIY
Sbjct: 520 QAFDVLVLRYGVQKRIY 536
>gi|348530324|ref|XP_003452661.1| PREDICTED: DIS3-like exonuclease 1-like [Oreochromis niloticus]
Length = 1044
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/526 (34%), Positives = 272/526 (51%), Gaps = 43/526 (8%)
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 172
T PTGR+V I++R+ RD +V F + G + ++ ++ L++P + I
Sbjct: 318 TPLPTGRIVGILQRN-WRDYVVTFPT-------RDGIQSQSRNSQRILTIPWDQRI---- 365
Query: 173 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
PK I+ ++ +A ++ V RID W S +P H + V GR
Sbjct: 366 -----PK-----------IRISTQQAEA-LQDHRVVVRIDSWESTSFYPNGHSVRVLGRA 408
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLRN-FCIFTI 287
GE+E ++ IL EN I FS L +P PW V E+ R+DLR+ +F+I
Sbjct: 409 GELETEVQTILLENCIHILPFSDAQLREMPVNSLEKPWTVDPSEVAERRDLRDSHLVFSI 468
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP D+DD LS+ +L D +GVHIADV++FV G+ D+EA+ R+T+ Y+ R+
Sbjct: 469 DPRGCEDVDDTLSVRKLPDRRLELGVHIADVTHFVKEGSLTDLEARSRATTYYLADRRYD 528
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP +LS ++ SL G DR A S+ W+L++ +V + W GRT+IRS +L YE AQ ++
Sbjct: 529 MLPAILSADLCSLLGGADRYAMSVLWELDAESLEVQEVWYGRTLIRSSYQLHYELAQALL 588
Query: 407 DG-KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
+G + +V LG PQ + + + +++ L V++ L+ KR GAL LE +
Sbjct: 589 NGEQVEVLELANLG---PQERDS-KVAQLTEALEMLTHVARHLRAKRDRGGALELEGVEV 644
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
DE V +++ E M+ AN A I AFP+ ALLRRHP P
Sbjct: 645 GAQLDEERNITALVPRQPLEVHETVAECMIYANHWVARKIQEAFPNQALLRRHPPPQQEL 704
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
+ G +DT S+ SL++A + D ++ + AT M A YF +
Sbjct: 705 FNQLVDTAKAKGFTIDTRSNKALAASLDRAVD--PQDPLVNRLFRMMATTAMSQALYFST 762
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
G D + HY LA YTHFTSP+RRY D+VVHR L AAL+ E+
Sbjct: 763 GAHPQD-QYYHYGLALDRYTHFTSPIRRYADIVVHRLLTAALDMER 807
>gi|227537978|ref|ZP_03968027.1| exoribonuclease R [Sphingobacterium spiritivorum ATCC 33300]
gi|227242054|gb|EEI92069.1| exoribonuclease R [Sphingobacterium spiritivorum ATCC 33300]
Length = 709
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 166/437 (37%), Positives = 227/437 (51%), Gaps = 35/437 (8%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
E V I EW + S P V V G+ GE ++NAIL + S F PE
Sbjct: 185 EKVVVSITEWPKGSKNPVGRVKDVLGKKGENNTEMNAILADYGFPLS-FPPEVEKEANSF 243
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
+ E+L R+D R FTIDP+ A D DDA+S ++L +G +GVHIADVS+FV P
Sbjct: 244 SAVIDNTEILKRRDFRTIPTFTIDPADAKDFDDAISFQQLPNGHYEIGVHIADVSHFVKP 303
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
TALD EA R+TSVY++ R IPMLP LS ++ SL P DRL FS ++L+ ++ D+
Sbjct: 304 DTALDKEAFERATSVYLVDRVIPMLPERLSNDLCSLRPNEDRLCFSAVFELDDKANIHDQ 363
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 444
W GRTVI S + SYE AQ++I+ K D I L E+
Sbjct: 364 WFGRTVIHSDRRFSYEEAQEVIENK---------------------AGDFTTEILKLNEL 402
Query: 445 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 504
+ IL++K+F +GA+ E+ + F DE G P R+D + L E+FMLLAN+ AE
Sbjct: 403 AYILREKKFKNGAISFESEEVKFTLDENGKPTGVYTKVRKDAHKLIEDFMLLANRKVAEY 462
Query: 505 IARAFPDSALL----RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 560
I + L R H PN L F F S+ G +L S + +SL K++
Sbjct: 463 IGKQGKGKNKLTFVYRFHDLPNPETLTTFSQFASRFGHKLTIRSDKETAKSLNALMTKIE 522
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
++L + A R M A Y + HY LAF YTHFTSP+RRYPD++VH
Sbjct: 523 GSKEQ-NLLTSLAVRSMAKAVYTTK-------NTSHYGLAFDYYTHFTSPIRRYPDVMVH 574
Query: 621 RTLNAALE-AEKLYWKH 636
R L L+ +K+ +H
Sbjct: 575 RLLQFYLDGGQKVNAEH 591
>gi|432958678|ref|XP_004086103.1| PREDICTED: DIS3-like exonuclease 1-like [Oryzias latipes]
Length = 1029
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 181/524 (34%), Positives = 275/524 (52%), Gaps = 44/524 (8%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP-DREYIQLTPTH 174
PTGRVV +++R+ RD +V F + + S+ ++ + L+VP DR
Sbjct: 323 PTGRVVGVLQRN-WRDYVVTFPS-------RDASQSQSRSCQRVLTVPWDR--------- 365
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ PK I+ ++ +A ++ V R+D W S +P H + V GR GE
Sbjct: 366 -RIPK-----------IRISTQQAEA-LQDHRVVVRLDSWESTSLYPNGHSVKVLGRAGE 412
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDP 289
+E ++ IL EN I FS + +P PW V E+ R+DLR+ +F+IDP
Sbjct: 413 LETEVQTILVENCIHVPPFSEAQMKEMPLSSPEKPWRVDPAEVARRRDLRDSHLVFSIDP 472
Query: 290 STATDLDDALSIERLSDG-ISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
D+DD LS+ L+ G + +GVHIADV++FV G+ D+EA+ R+T+ Y+ R+ M
Sbjct: 473 LGCEDVDDTLSVRSLAGGTLLELGVHIADVTHFVPEGSLTDLEARTRATTYYLADRRYDM 532
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTVIRSCCKLSYEHAQDIID 407
LP +LS ++ SL GVDR A S+ W+L++ V R W GRTVIRS +L YE AQ +++
Sbjct: 533 LPAVLSADLCSLLGGVDRYAMSVLWELDAGSLAVRRVWFGRTVIRSSYQLHYELAQALLN 592
Query: 408 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
G+ E E + + + ++++++ L VS+ L+ +R GAL LE +
Sbjct: 593 GE---EVRVPELERFCPEEKDLKLAQLIQALEMLTRVSRHLRLQRDRGGALELEGVEVRA 649
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
D+ V +++ E M+ AN A I +FP+ ALLRRHP P +
Sbjct: 650 QLDKDKNITALVPRQPLEVHETVAECMIYANHWVARKIQESFPNRALLRRHPPPRLELFS 709
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 587
+ G +DT ++ SL++A + D ++ +L ATR M A YF +G
Sbjct: 710 QLVDTAKAMGFSVDTRTNKALADSLDRAVD--PQDPMVNRLLRMMATRAMSQALYFSTGS 767
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
D + HY LA YTHFTSP+RRY D+VVHR L AALE E+
Sbjct: 768 QPQD-QYYHYGLALDRYTHFTSPIRRYADMVVHRLLTAALELEQ 810
>gi|145499470|ref|XP_001435720.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402855|emb|CAK68323.1| unnamed protein product [Paramecium tetraurelia]
Length = 897
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 264/522 (50%), Gaps = 71/522 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP-DREYIQLTPTH 174
P G+VVS+++R+ R G + N + VP D Y H
Sbjct: 322 PYGKVVSVLQRTERH--FCGHVENN-------------------IFVPADGRYPNFILKH 360
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
KY + D I+++ V +W S P + V G+ G+
Sbjct: 361 SKYDTL-----------------QDKKIQVQFV-----DWPVWSDKPLCKLKKVLGKAGD 398
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLSRKDLRNFCIFTIDPSTA 292
+ + N IL E+ + FS + L+CLP + + ++E+ R DLR+ + +IDP
Sbjct: 399 MYIEGNVILLEHQVEIREFSHQVLACLPIEGDKYRISEQEIKRRMDLRDILVCSIDPVGC 458
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D+DD L RL + + VGVHIADVS+FV P +A+D EA R T+VY++ R+ MLP L
Sbjct: 459 KDIDDTLHCRRLENNLYEVGVHIADVSHFVKPDSAIDKEAAHRCTTVYLVDRRTDMLPKL 518
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
L+E + SL VDRLAFS+ W ++ ++ D G++VIRS L Y+ AQ++ID D
Sbjct: 519 LTENLCSLVSNVDRLAFSVIWIMDDQANIKDVKFGKSVIRSVASLHYQQAQEMIDNPND- 577
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF-DE 471
S + + I+ L ++K LK R GAL L +++ F F DE
Sbjct: 578 ------------------NSQLTQGIRLLNMLAKKLKQLRTDQGALSLASNQVKFSFDDE 619
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + D N L EEFMLLAN + A I + FP ++LRRH P M++L+E +
Sbjct: 620 THNPSDVRMYQLYDTNSLVEEFMLLANCSVANQILQRFPSISVLRRHQEPKMKQLKELQI 679
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY-ATRPMQLASYFCSGDFKD 590
+ G Q +S +SL+Q ++ D + F+ LI TR M A Y C+ D D
Sbjct: 680 LMNDLGYQFSFDTSKLLSESLDQI-QRPNDSF--FNKLIRMITTRCMNEALYVCTADV-D 735
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
+ HY LA +YTHFTSP+RRY D++VHR L A+++ E L
Sbjct: 736 YPELYHYGLAAELYTHFTSPIRRYADVLVHRLLAASIDLESL 777
>gi|296417554|ref|XP_002838419.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634355|emb|CAZ82610.1| unnamed protein product [Tuber melanosporum]
Length = 956
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 185/527 (35%), Positives = 261/527 (49%), Gaps = 61/527 (11%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PT RVV +I+R+ R VG L+ + + G S+++ + L P
Sbjct: 343 PTARVVGVIKRNWRY--YVGHLDPSSAPSAGGRSQRN---------------VFLIPMDK 385
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
K PK+ + + + KR + ID W+ S +P H + G
Sbjct: 386 KIPKIRLRTRQASELFGKR------------IVVSIDAWDRNSRYPTGHFVRSLGEVETK 433
Query: 236 EPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQE----ELLSRKDLRNFCIFTIDP 289
E +I A+L E + F L CLP W VPQ+ L R D R + +IDP
Sbjct: 434 EAEIEALLLEWDVQYRPFPKAVLDCLPKEGHEWRVPQDPEDPRLHQRVDYRGLLVCSIDP 493
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
D+DDAL R+ +G VGVHIADV++FV P TA+D EA VR T+VY++ +++ ML
Sbjct: 494 PGCQDIDDALHASRMPNGNYEVGVHIADVTHFVKPNTAMDDEASVRGTTVYLVDKRVDML 553
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P+LL ++ SL P V+R AFS+ W++ GDVVD +++I+S SYE AQ ID K
Sbjct: 554 PMLLGTDLCSLKPHVERFAFSVIWEMTENGDVVDSRFSKSMIKSREAFSYEQAQLRIDDK 613
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 468
S N ++ + +++L +SK L+ KR GAL L + + +
Sbjct: 614 ----SQN---------------DELTQGMRTLLMLSKKLRQKRMAAGALNLASPEVKIES 654
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 528
E P D + N L EEFMLLAN + A I AFP +A+LRRH AP E
Sbjct: 655 ESETSDPIDVKTKEMLETNSLVEEFMLLANISVAGKIYEAFPQTAMLRRHGAPPASNFEE 714
Query: 529 FE-AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 586
+ GL L SS SL++ + F+ L+ ATR M A YFCSG
Sbjct: 715 LQNQLRVTRGLTLHIDSSKALADSLDRC---VDPSNPFFNTLVRILATRCMLSAEYFCSG 771
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
+ ++ HY LA +YTHFTSP+RRY D+V HR L AA+ E L+
Sbjct: 772 T-QGYPEFRHYGLASEIYTHFTSPIRRYADVVAHRQLAAAIGYEPLH 817
>gi|145477527|ref|XP_001424786.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391852|emb|CAK57388.1| unnamed protein product [Paramecium tetraurelia]
Length = 1123
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 181/553 (32%), Positives = 279/553 (50%), Gaps = 65/553 (11%)
Query: 208 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE 267
+A+ +W +P ++ G G ++ + IL N++ + FS L +
Sbjct: 554 SAKYLQWPRNKKYPTVELIKEVGVQGNIDVECEVILTANSVYENDFSEMCKEELKAFTHD 613
Query: 268 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 327
+E ++R DL I +IDP TA DLDDALSI L +GI +GVHIADVS+FV+P +
Sbjct: 614 SIAKERVNRMDLTKEYICSIDPVTARDLDDALSINNLGNGIYEIGVHIADVSHFVIPNSE 673
Query: 328 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW-- 385
+D EA +R+TSVY++ + IPMLP +L EE+ SLN V+RLAFS+F+ + S G+V+ W
Sbjct: 674 VDKEAILRTTSVYLVHKVIPMLPRILCEELCSLNRDVERLAFSVFFKITSEGEVL--WDS 731
Query: 386 --IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
++VIRSC +LSY+ IIDG+ + S GE + F+ + + L
Sbjct: 732 FRAAKSVIRSCAQLSYDIVNQIIDGEIEQFSQ---GEERYNVAEGFDEKILKDKVLLLNN 788
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+++ ++KR +G++ E SK F+ + P R F+ EE+MLLAN+ +
Sbjct: 789 IAQKRREKRL-EGSITFEKSKLRFILNADLFPTGYTEEKRGLAQFMVEEWMLLANQFVGK 847
Query: 504 VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ-----LDTSSSGQFHQSLEQAREK 558
+ +A+LR+H +P KL ++ GL+ LD S+S ++ + E
Sbjct: 848 KLIEYDTKTAVLRQHISPRAEKLEYYQNLLEACGLEEMAKNLDVSTSKNLKLTMAKVSEI 907
Query: 559 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
++ L IL + M+ A YF D + +W HYAL F VYTHFTSP+RRYPD++
Sbjct: 908 ESEEIKL--ILGFRLLKLMEAAQYFVV-DNTPEIEWRHYALDFDVYTHFTSPIRRYPDVL 964
Query: 619 VHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAAL 678
VHR L ALE +++ TG
Sbjct: 965 VHRRLQIALEQQEVDQ--------------------TG---------------------- 982
Query: 679 KYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFM 738
D L + HCND KL R V D C +L++ +LLK V + + +L++ + +
Sbjct: 983 ----ETKDKLKAIMQHCNDCKLNSRRVSDQCDQLFLALLLKANPVEV-DGYILSVTKQHI 1037
Query: 739 TIYIEKLAIERRI 751
I I K +ERR+
Sbjct: 1038 EIIIPKFNLERRV 1050
>gi|358058536|dbj|GAA95499.1| hypothetical protein E5Q_02154 [Mixia osmundae IAM 14324]
Length = 1026
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 201/608 (33%), Positives = 296/608 (48%), Gaps = 76/608 (12%)
Query: 91 SSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSR 150
++++ D +A E+ +S +PTGRVV I+ R+ R V L+ +
Sbjct: 380 TTEEPDSTDAKEQKETAVSDQGQAQPTGRVVGILRRAWR--SYVCHLDTSTL-------- 429
Query: 151 KDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAAR 210
A SL + + PT K P++ + + + + ++ LV+
Sbjct: 430 --APAALESLGT---QSVFAVPTDRKIPRIRIRTRQISALVGQKF----------LVS-- 472
Query: 211 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEV 268
ID W S P+ H + G E +I ++L E + FS L CLP W V
Sbjct: 473 IDSWEVSSRSPEGHFIRALGTVENKEAEIESLLLEWDVPYRPFSGSVLKCLPAEGDTWHV 532
Query: 269 PQEE-----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
P ++ R+DLR I +IDP D+DDAL L +G GVHIADVSYFV
Sbjct: 533 PPKQDGGPAWRGREDLRELNICSIDPPGCQDIDDALHARMLPNGNVEAGVHIADVSYFVH 592
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
P +D EA R T+VY++ ++I MLP LL + SL P V+RLAFS+ W+L+S ++V
Sbjct: 593 PDNPMDAEAASRGTTVYLVDKRIDMLPALLGTNLCSLRPYVERLAFSVIWELDSNANIVS 652
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
++VI S +YE AQ D Q + ++ ++I+ L +
Sbjct: 653 TRFTKSVIASKAAFTYEAAQKHKD-------------------DQTQTDELAQNIRLLNK 693
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTA 501
++ L+ KR GAL L + + + E P D + N L EEFMLLAN +
Sbjct: 694 LAIALRGKRMAAGALNLASPEVKIHMESPESTGPVDVEQKQSYETNSLVEEFMLLANISV 753
Query: 502 AEVIARAFPDSALLRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
A I + FP +A+LRRH P+ N L + + G+ LD SSSG+ SL++ +
Sbjct: 754 AARIQQQFPQTAVLRRHLPPPSDNFDVLTDV--LTKRKGVTLDVSSSGRLASSLDECVDP 811
Query: 559 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
D F+ L+ ATR M A YFCSG + +GHY LA P+YTHFTSP+RRY D+
Sbjct: 812 SNPD---FNTLVRIMATRCMLSAEYFCSGSVAANA-FGHYGLATPIYTHFTSPIRRYADI 867
Query: 618 VVHRTLNAALEAEKLYWK-HRR-----MLPKNN--HREGVRGRFLTGIFYDKDAAESLEG 669
+VHR L AA+ + L+ H R ++ N HR G + + FY A +L+G
Sbjct: 868 LVHRQLFAAISSTPLHSAMHSRDHVDGLMSNINKRHRSGQQAGRASVEFY---VALALQG 924
Query: 670 REALSVAA 677
+E SV A
Sbjct: 925 KEEASVEA 932
>gi|384249711|gb|EIE23192.1| RNB-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 1599
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 208/677 (30%), Positives = 317/677 (46%), Gaps = 109/677 (16%)
Query: 83 SDSTEKVSSSQQNDGMN---AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNV 139
S TE ++ Q GM A +S KRPTG+VV II R+ R G G L
Sbjct: 317 SAETEDLARDQDGAGMAPQVAPGEHYGDAASSGEKRPTGKVVGIIRRNWRTRGYAGSLMP 376
Query: 140 NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGD 199
+Q +G R A + P K+P + + +
Sbjct: 377 DQ--PGRGARRGGAN-------------MLFCPIERKFPFIRIHTRQA------------ 409
Query: 200 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 259
AT+ + + ID W +S +P H + G G+ + + +L EN I S F+P +
Sbjct: 410 ATLADKRIVVAIDGWEPDSAYPAGHYVCTLGPIGDRDTETEVLLLENDINTSPFTPAVHA 469
Query: 260 CLPCVPWEVPQEEL--LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 317
C+P +PW V Q ++ +R+DLR+ I ++DP D+DDAL I L +G +GVHIAD
Sbjct: 470 CVPPLPWSVTQGDIDDPNREDLRHLPICSVDPPGCKDIDDALHIRELPNGNLELGVHIAD 529
Query: 318 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 377
V++F+ GTA+D+EA RST+ Y++QR+I MLP L+E++ SL V+RLAFS+ W++
Sbjct: 530 VTHFLHSGTAMDVEAASRSTTTYLVQRRIDMLPKPLTEDICSLRADVERLAFSVLWEMTP 589
Query: 378 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 437
V ++VI+S L+Y AQ ID + +L+ + +
Sbjct: 590 DVRTVGVRFTKSVIKSRAALTYAEAQSRIDDE--------------RLHDELSV-----N 630
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLL 496
++ + +++IL+ +R GAL+L + + F D E P D + N + EE MLL
Sbjct: 631 LRKMNAIARILRRRRAEAGALQLASPEVKFEIDTETHDPLDV-----REANQMVEEMMLL 685
Query: 497 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR 556
AN T A+ AF LLRRH P R+ + G +D S+S +SL+QA
Sbjct: 686 ANITVAQHTLAAFAACTLLRRHAVPPPRQFEPLLRAATAAGFTIDISTSKALAESLDQA- 744
Query: 557 EKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
++ + F+ L+ ATR M A Y SGDF ++ HY LA P+YTHFTSP+RRY
Sbjct: 745 --VRSEDAYFNKLVRIMATRCMTQAVYIGSGDFA-PPEYHHYGLAAPLYTHFTSPIRRYA 801
Query: 616 DLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSV 675
D+VVHR L AAL +L E RE L+
Sbjct: 802 DVVVHRLLAAALNLNRL-------------------------------PEDARDREKLAA 830
Query: 676 AALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGP 735
+A + N R + A V+L+ I K + V +++AR+ +
Sbjct: 831 ---------------LADNINLRHRNAQMAGRASVELHTLIFFKDRTV-IADARITKVKA 874
Query: 736 RFMTIYIEKLAIERRIY 752
+ +++ K IE +Y
Sbjct: 875 NGLVVFVPKYGIEGPVY 891
>gi|340058951|emb|CCC53322.1| putative rrp44p homologue [Trypanosoma vivax Y486]
Length = 983
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 240/462 (51%), Gaps = 36/462 (7%)
Query: 168 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 227
+ P + P++ + + D KRL + ID+W + FP H +
Sbjct: 395 VLFQPKDNRIPRIRITTSHINDLKDKRL------------SVIIDDWPAYNSFPVGHYVE 442
Query: 228 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTI 287
V G G+ + + IL EN I FS CLP W V Q+EL R DLR+ C+ ++
Sbjct: 443 VLGTIGDKDTEAKVILLENDIPHYDFSEAVYDCLPKGEWSVTQDELARRLDLRDLCVVSV 502
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP D+DDAL ++ VGVHIADV++F+ TA+D EA RSTSVY++ R+I
Sbjct: 503 DPLGCRDIDDALHCRVVNGNHLEVGVHIADVTHFLKENTAMDEEAAKRSTSVYLVDRRIN 562
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 407
MLP LL+E + S+ G DR AFSI W+ + +VV + G+TVI S L Y AQ +ID
Sbjct: 563 MLPQLLTENLCSIVAGEDRYAFSIMWEFDENYNVVREYFGKTVINSRAALYYGDAQKMID 622
Query: 408 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
D S++ S++ L +S+ K R DGAL L + + F
Sbjct: 623 DLTD-------------------QSEMAVSLRRLMRLSRHFKALREKDGALFLASQEFKF 663
Query: 468 LFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
D E+ P D + N + EE+ML AN AA + ++P LLRRH AP
Sbjct: 664 KVDNEHLNPIDMQTYQTFEANSMIEEWMLFANAAAARRVYSSYPRWTLLRRHQAPAENSF 723
Query: 527 REF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
EA + G++LD SSS ++SLE+ + +D +++ TR ++ A YF S
Sbjct: 724 DALNEALQRRVGVKLDDSSSLALNKSLEKCVD--PEDAYFNNLIRMLVTRCLRQAQYFSS 781
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
+ D ++ H+ LA P+YTHFTSP+RRY D++VHR L AAL
Sbjct: 782 SEVSQD-EFHHFGLAMPIYTHFTSPIRRYADVIVHRQLAAAL 822
>gi|402902182|ref|XP_003913995.1| PREDICTED: exosome complex exonuclease RRP44 [Papio anubis]
Length = 874
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 160/412 (38%), Positives = 227/412 (55%), Gaps = 25/412 (6%)
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNF 282
H + G GE E + +L E+ + FS LS LP +PW + ++++ +R+DLR+
Sbjct: 330 GHFVRNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHL 389
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
CI ++DP TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+
Sbjct: 390 CICSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLC 449
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
+++I M+P LLS + SL VDRLAFS W++N +++ ++VI S L+Y A
Sbjct: 450 EKRIDMVPELLSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEA 509
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
Q ID S+N D+ S++ L +++KILK +R GAL L +
Sbjct: 510 QLRID------SANM-------------NDDITTSLRGLNKLAKILKKRRIEKGALTLSS 550
Query: 463 SKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
+ F D E P D + N + EEFMLLAN + A+ I F + ALLR+HPAP
Sbjct: 551 PEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVAKKIHEEFSEHALLRKHPAP 610
Query: 522 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 581
L++ T ++ +SL++A E Y L +L ATR M A
Sbjct: 611 PPSNYEILVKAARSRNLEIKTDTAKSLAESLDRA-ESPTFPY-LNTLLRILATRCMMQAV 668
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR L A+ A+ Y
Sbjct: 669 YFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAVGADCTY 717
>gi|67526399|ref|XP_661261.1| hypothetical protein AN3657.2 [Aspergillus nidulans FGSC A4]
gi|40740675|gb|EAA59865.1| hypothetical protein AN3657.2 [Aspergillus nidulans FGSC A4]
gi|259481809|tpe|CBF75677.1| TPA: putative TeaA receptor TeaR (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 1015
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 185/527 (35%), Positives = 262/527 (49%), Gaps = 62/527 (11%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT +VV +++R+ W Y G D S + ++ + + P
Sbjct: 364 QPTAKVVGVVKRN--------------WRQYVGTV--DPTSTGSQTTGRRQQNVFVLPME 407
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
K PK+ V + + + +R+ LV ID WN +S +P H + G
Sbjct: 408 KKVPKIRVRTRQATELLGQRI----------LVT--IDAWNRDSRYPTGHFIRSLGELET 455
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCIFTID 288
+ A+L E + F L CLP W VP + R+DLR+ I +ID
Sbjct: 456 KSAETEALLLEWDVQYKPFPKAVLECLPPEGHDWRVPASKDDIGWRGRRDLRDLLICSID 515
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P D+DDAL +L +G VGVHIADVS+FV P A+D+EA VR T+VY++ ++I M
Sbjct: 516 PPGCQDIDDALHARKLPNGNFEVGVHIADVSHFVKPNNAMDLEASVRGTTVYLVDKRIDM 575
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP LL ++ SL P V+R AFS+ W++ +VV ++VIRS SYE AQ ID
Sbjct: 576 LPHLLGTDLCSLKPYVERYAFSVLWEMTPDAEVVSADFTKSVIRSREAFSYEQAQLRID- 634
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 468
D ++ L E S+++L +SKIL+ KR GAL L + +
Sbjct: 635 --DPSKTDELTE----------------SMRTLLHLSKILRQKRMDAGALNLASPEVRIE 676
Query: 469 F--DEYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
DE G P V + N L EEFML AN T A I FP +A+LRRH P +
Sbjct: 677 ADNDEVGDPLADVKTKAMLATNSLVEEFMLHANITVAAKIYSTFPQTAMLRRHATPPPQN 736
Query: 526 LREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYF 583
E K ++LD SSS SL++ + + F+ L+ ATR M A YF
Sbjct: 737 FEELINQLTKKRDMRLDVSSSRALADSLDRCTDA---ENPFFNTLVRILATRCMTSAEYF 793
Query: 584 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
C+G ++++ HY LA P+YTHFTSP+RRY DL+VHR L AA+ E
Sbjct: 794 CAGAHA-ESEFRHYGLASPIYTHFTSPIRRYADLLVHRQLAAAINYE 839
>gi|367020182|ref|XP_003659376.1| hypothetical protein MYCTH_2296319 [Myceliophthora thermophila ATCC
42464]
gi|347006643|gb|AEO54131.1| hypothetical protein MYCTH_2296319 [Myceliophthora thermophila ATCC
42464]
Length = 988
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 191/560 (34%), Positives = 276/560 (49%), Gaps = 59/560 (10%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 142
++ T + S ++ + R + ++ +PT RVV +++R+ R+ VG ++ +
Sbjct: 346 AEETADIVSEKERKALQEEVRRTHSKTTEGHAQPTARVVGVVKRNWRQ--YVGHIDQSSV 403
Query: 143 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
RK ++ + + P K PK+ + + + + + KR+
Sbjct: 404 SQSAQQGRK-------------QDTVFVIPMDRKIPKIRLRTRQVAELVGKRI------- 443
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP 262
LVA ID W+ S P H + G + A+L E + F L CLP
Sbjct: 444 ---LVA--IDAWDRSSRHPIGHFVRSLGELETKAAETEALLLEYDVQYRPFPKTVLDCLP 498
Query: 263 CV--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIA 316
W+VPQ R+DLR+ I +IDP D+DDAL L +G VGVHIA
Sbjct: 499 KEGHDWKVPQSTDDPGWRDREDLRHLLICSIDPVGCQDIDDALHSRPLPNGNFEVGVHIA 558
Query: 317 DVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN 376
DVS+FV P TA+D EA +R T+VYM+ ++I MLP LL ++ SL P V+R AFS+ W+L
Sbjct: 559 DVSHFVKPNTAMDAEASIRGTTVYMVDKRIDMLPTLLGTDLCSLKPHVERYAFSVIWELT 618
Query: 377 SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVR 436
+ DVV+ ++VI+S SYE AQ +D + D+ +
Sbjct: 619 ADADVVNVRFTKSVIKSREAFSYEQAQLRVDDA-------------------SQQDDLTK 659
Query: 437 SIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFML 495
SI++L +SK LK KR GAL L + + V E P D D L EEFML
Sbjct: 660 SIRTLMALSKKLKQKRLDAGALSLSSPEVKVQTESETSDPIDVKTKVLLDTMSLVEEFML 719
Query: 496 LANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQ 554
LAN + A I AFP +A+LRRH AP E + K GL+L SS SL++
Sbjct: 720 LANVSVARKIYEAFPQTAILRRHGAPPKTNFDELADQLRVKRGLELSVESSRALADSLDR 779
Query: 555 AREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
+ + F+ L+ ATR M A YFCSG + ++ HY LA +YTHFTSP+RR
Sbjct: 780 CVDPKEP---FFNTLVRIMATRCMMAAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRR 835
Query: 614 YPDLVVHRTLNAALEAEKLY 633
Y DLV HR L AA+ E ++
Sbjct: 836 YADLVAHRQLAAAIGYEPVH 855
>gi|444510372|gb|ELV09589.1| DIS3-like exonuclease 2 [Tupaia chinensis]
Length = 447
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 151/408 (37%), Positives = 217/408 (53%), Gaps = 53/408 (12%)
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 405
+PMLP LL EE+ SLNP D+L FS+ W L G ++ W GRT+I SC KLSYEHAQ +
Sbjct: 9 VPMLPRLLCEELCSLNPMTDKLTFSVIWTLTPEGKILAEWFGRTIIHSCAKLSYEHAQSM 68
Query: 406 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
ID + E P + + +V +++ +L+ ++K L+ +RF DGALRL+ K
Sbjct: 69 IDSP----TETVPEEELPAISPEHSSKEVHQAVLNLHRIAKQLRRQRFVDGALRLDQVKL 124
Query: 466 VFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 524
F D E G P + D N L EEFMLLAN A I RAFP ALLRRHP P ++
Sbjct: 125 AFTLDHETGLPQGCHVYEYRDSNKLVEEFMLLANMAVAHKIHRAFPTRALLRRHPPPQVK 184
Query: 525 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 584
L + E FC + GL +D SS+G ++SL + K ++L N +RPMQ+A YFC
Sbjct: 185 MLEDLEEFCDQMGLSMDFSSAGALNKSLTETFGDDKYSLARKEVLTNMCSRPMQMAVYFC 244
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNN 644
SG +D + HYAL P+YTHFTSP+RR+ D++VHR L AAL ++ LP
Sbjct: 245 SGVLRDLVQFRHYALNVPLYTHFTSPIRRFADVLVHRLLAAALGYQE--------LPDVE 296
Query: 645 HREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRN 704
E+L+ + A HCN R++A +
Sbjct: 297 -------------------PEALQKQ---------------------ADHCNSRRVASKR 316
Query: 705 VKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
V++ L+ +L+K+ L SEA V+ + + + + + +++RIY
Sbjct: 317 VQELSTNLFFAVLVKESGPLESEAMVMGVLNQAFDVLVLRYGVQKRIY 364
>gi|449268388|gb|EMC79256.1| DIS3-like exonuclease 2 [Columba livia]
Length = 422
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 149/406 (36%), Positives = 218/406 (53%), Gaps = 53/406 (13%)
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 407
MLP LL EE+ SLNP DRL FS+ W + G ++D W GRTVI SC KLSY+HAQ +I+
Sbjct: 1 MLPKLLCEELCSLNPMRDRLTFSVVWKVTPEGKILDEWFGRTVICSCVKLSYDHAQSMIE 60
Query: 408 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
V S L P + Q +++ +++ +L+ +++ L+ +RF DGALRL+ K F
Sbjct: 61 SPGKVFSPEEL----PPVSPQHSVAEIQQAVLNLHRIAQHLRRQRFIDGALRLDQLKLSF 116
Query: 468 LFDE-YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
D+ G P + D N L EEFMLLAN A I R+FP+ ALLRRHP P + L
Sbjct: 117 TLDQDSGMPQGCYIYQYRDSNKLVEEFMLLANMAVAHQIYRSFPEQALLRRHPPPQTKLL 176
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 586
++ FC++ GL +D SS+G H+SL + K ++L N +RPMQ+A YFC+G
Sbjct: 177 KDLMEFCNQVGLDIDFSSAGTLHKSLNETFGADKYSEARKEVLTNMFSRPMQMALYFCTG 236
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 646
KD+T + HYAL P YTHFTSP+RRY D++VHR L+A+L A P +
Sbjct: 237 VLKDETLFRHYALNVPFYTHFTSPIRRYADIIVHRLLSASLGASS---------PIKMKK 287
Query: 647 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 706
E ++ + A HCNDRK+A + V+
Sbjct: 288 EAIQKQ---------------------------------------ADHCNDRKMASKRVQ 308
Query: 707 DACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
+ L+ + +++ L SEA V+ + + + K +++R+Y
Sbjct: 309 ELSADLFFAVFVRECGPLESEAMVMGVLNEAFDVLVLKFGVQKRVY 354
>gi|310793361|gb|EFQ28822.1| RNB domain-containing protein [Glomerella graminicola M1.001]
Length = 983
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 188/528 (35%), Positives = 262/528 (49%), Gaps = 59/528 (11%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT +VV II+R+ R+ VG ++ + G RK ++ + L P
Sbjct: 374 QPTAKVVGIIKRNWRQ--YVGHIDPSSASKSGGQGRK-------------QDNVFLIPMD 418
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ PK+ + + +P+ + KRL LV ID W+ +S P H + G
Sbjct: 419 KRIPKIKLRSRQVPELLGKRL----------LVT--IDAWDRDSRHPVGHFVRSLGELET 466
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE----ELLSRKDLRNFCIFTID 288
+ A+L E + F L CLP W VPQ R+DLR I +ID
Sbjct: 467 KTAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWRVPQSLEDPGWRDREDLRKLLICSID 526
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++ ++I M
Sbjct: 527 PIGCQDIDDALHARPLPNGNFEVGVHIADVSHFVKPANAMDTEASLRGTTVYLVDKRIDM 586
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP+LL ++ SL P V+R AFS+ W++++ D+V ++VI+S SYE AQ +D
Sbjct: 587 LPMLLGTDLCSLKPYVERYAFSVIWEMDANADIVGARFTKSVIQSKEAFSYEAAQLRVD- 645
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVF 467
+ D+ SI++L +SK LK KR GAL L + + V
Sbjct: 646 ------------------DASQQDDLTNSIRTLMMLSKKLKQKRMDAGALSLSSPEVKVQ 687
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
+ E P D D L EEFMLLAN + A I AFP +A+LRRH AP
Sbjct: 688 MESETSDPIDVKTKQHLDTMSLVEEFMLLANVSVASKIYEAFPQTAILRRHGAPPKTNFD 747
Query: 528 EF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCS 585
E K GL+L SS SL+Q + F+ L+ ATR M A YFCS
Sbjct: 748 ELANQLRVKKGLELRVDSSKALADSLDQCVDPADP---FFNTLVRIMATRCMMSAEYFCS 804
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
G + ++ HY LA +YTHFTSP+RRY DLV HR L AA+ E ++
Sbjct: 805 GT-QAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIGYEAIH 851
>gi|378725337|gb|EHY51796.1| hypothetical protein HMPREF1120_00023 [Exophiala dermatitidis
NIH/UT8656]
Length = 1006
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 189/564 (33%), Positives = 272/564 (48%), Gaps = 67/564 (11%)
Query: 79 HPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLN 138
+P + + E V + + + R + + +PT RVV I++R+ R+ +VG
Sbjct: 339 NPDSEEQEESVVTETERRALQEEVRRAHSAGAENRAQPTCRVVGIMKRNWRQ--LVG--T 394
Query: 139 VNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEG 198
++ GG+R+ + L P + PK+ + + + + + KR
Sbjct: 395 IDPISGTSGGNRQTT--------------VFLVPMDKRIPKIRIQTRQVAELVGKR---- 436
Query: 199 DATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL 258
+ A ID W+ ++ +P H + G E + A+L E + F L
Sbjct: 437 --------IVATIDSWDRDTRYPVGHYIRSLGELETKEAETEALLLEYDVQYRPFPKTVL 488
Query: 259 SCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
CLP W+VP E RKDLRN + +IDP D+DDAL L +G VG
Sbjct: 489 DCLPSEGHNWKVPTESSDPGWKGRKDLRNLLVCSIDPPGCQDIDDALHARPLPNGNFEVG 548
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVS+FV P A+D EA R T+VY++ ++I MLP LL ++ SL P V+R AFS
Sbjct: 549 VHIADVSHFVKPNNAMDAEASSRGTTVYLVDKRIDMLPPLLGTDLCSLKPYVERYAFSTL 608
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W++ DVV ++VI S SYE AQ ID D +++ L +G
Sbjct: 609 WEITPDADVVSASFTKSVILSREGFSYEQAQKRID---DPTATDELTQG----------- 654
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRED----LNF 488
+++L +S+ L+ KR GAL L S P + DS+ + N
Sbjct: 655 -----MRTLLSLSQKLRQKRMDAGALNL--SSPEVRIEADSESSDSLADVKTKAHLATNS 707
Query: 489 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQ 547
L EEFMLLAN T A+ I FP +ALLRRH P + E G LD SSS
Sbjct: 708 LVEEFMLLANITVAKKIQSVFPQTALLRRHATPPASNFADLSEQLKRMRGFDLDVSSSKA 767
Query: 548 FHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTH 606
SL++ + ++ F+ LI ATR M A YFCSG + ++ HY LA +YTH
Sbjct: 768 LADSLDRC---VDPNHPFFNTLIRIMATRCMTSAEYFCSGSHA-EPEYRHYGLASEIYTH 823
Query: 607 FTSPLRRYPDLVVHRTLNAALEAE 630
FTSP+RRY DL+VHR L A+ E
Sbjct: 824 FTSPIRRYADLLVHRQLAYAIGYE 847
>gi|342185875|emb|CCC95360.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 979
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 193/559 (34%), Positives = 274/559 (49%), Gaps = 63/559 (11%)
Query: 91 SSQQNDGMNAIE----------RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVN 140
++ +NDG NA + +A+ Y P GRVV I + R G ++V
Sbjct: 322 ANNENDGENAGDFGDDAIGEEGEEAALARGYT---PVGRVVGIT--AMNRRPFCGSIDVE 376
Query: 141 QWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA 200
+ G+ N S L P + P++ + L D KRL
Sbjct: 377 ELHKL-SGTMDTLTGNVSVL---------FQPKDNRIPRIRITTGHLSDLKDKRL----- 421
Query: 201 TIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSC 260
+ ID W+ S FP H + V G G+ + + IL EN I FS C
Sbjct: 422 -------SVIIDGWSACSSFPVGHYVEVLGTIGDKDTEAKVILLENDIPHYDFSEAVYDC 474
Query: 261 LPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 320
LP W V EE+ R DLR+ C+ ++DP D+DDAL +++ VGVHIADV++
Sbjct: 475 LPKGEWSVSPEEVNRRLDLRDLCVVSVDPLGCRDIDDALHCRKVNGNHLEVGVHIADVTH 534
Query: 321 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGD 380
F+ TA+D EA RSTSVY++ R+I MLP LL+E + S+ DR AFSI W+ +
Sbjct: 535 FLRESTAMDEEAAKRSTSVYLVDRRINMLPQLLTENLCSIVANEDRYAFSILWEFDENFS 594
Query: 381 VVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKS 440
VV + G+TVIRS L Y AQ +ID D S++ S++
Sbjct: 595 VVREYFGKTVIRSRAALYYGDAQRMIDDPED-------------------NSEIATSLRY 635
Query: 441 LYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANK 499
L ++ + KDKR DGAL L + + F D ++ P D + N + EE+ML AN
Sbjct: 636 LMQLGRHFKDKREKDGALFLCSQEFKFKVDNDHVNPTDMQAYQTFESNSMIEEWMLFANA 695
Query: 500 TAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
AA + ++P LLRRH AP +A K G++LD +SS + SL++ +
Sbjct: 696 AAARRVYASYPRWTLLRRHQAPAENAFDVLNDALYEKIGVKLDDTSSLTLNGSLDKCVDP 755
Query: 559 LKDDYVLFDILI-NYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
D Y F+ LI TR ++ A YF S + D ++ HY LA P+YTHFTSP+RRY D+
Sbjct: 756 -NDPY--FNRLIRTLITRCLRQAQYFSSSEVSRD-EFHHYGLAMPIYTHFTSPIRRYADV 811
Query: 618 VVHRTLNAALEAEKLYWKH 636
+VHR L AAL +L H
Sbjct: 812 IVHRQLAAALGIVELSETH 830
>gi|396462694|ref|XP_003835958.1| similar to exosome complex exonuclease exoribonuclease (Rrp44)
[Leptosphaeria maculans JN3]
gi|312212510|emb|CBX92593.1| similar to exosome complex exonuclease exoribonuclease (Rrp44)
[Leptosphaeria maculans JN3]
Length = 1070
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 187/531 (35%), Positives = 265/531 (49%), Gaps = 67/531 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV II+R+ W Y G +D+ ++ S S ++ + L P
Sbjct: 383 QPTARVVGIIKRN--------------WRQYVGHIDRDSVRSVSKSSR-QQQTVFLVPMD 427
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK+ + + + + +R + A ID W+ +S +P H + G
Sbjct: 428 KRIPKIRIRTRQAGELLGQR------------ILATIDSWDIDSRYPVGHFVRSLGELES 475
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE----ELLSRKDLRNFCI 284
+G E E A+L E + F L CLP W+VP RKDLR+ +
Sbjct: 476 KGAETE----ALLLEWDVQYKPFPKTVLDCLPAEGHDWKVPTSLEDPGWKGRKDLRDLLV 531
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL +L +G +VGVHIADVS+FV P A+D EA R T+VY++ +
Sbjct: 532 CSIDPVGCVDIDDALHAHKLPNGNYQVGVHIADVSHFVKPNNAMDKEASQRGTTVYLVDK 591
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP+LL ++ SL P V+R AFS+ W++ ++V ++VIRS SYE AQ
Sbjct: 592 RIDMLPMLLGTDLCSLKPYVERYAFSVIWEVTEDAEIVSSQFTKSVIRSREAFSYEQAQI 651
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
ID K + D+ +++L +SK LK KR GAL L + +
Sbjct: 652 RIDDK-------------------SQEDDLTNGMRTLLMLSKKLKQKRMEAGALNLSSPE 692
Query: 465 -PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
V E P D D N L EEFMLLAN + A AFP +ALLRRH AP
Sbjct: 693 VKVQTESETSDPVDVQTKKLLDTNSLVEEFMLLANISVAAKNYEAFPQTALLRRHAAPPK 752
Query: 524 RKLREFE-AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
E + K G++L T SS SL++ + + F+ L+ ATR M A
Sbjct: 753 TNFEELDNQLKVKKGMELKTDSSKALADSLDKC---VDPNNPFFNTLVRIMATRCMMSAE 809
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
YFC+G + ++ HY LA +YTHFTSP+RRY DL HR L AA+E E+L
Sbjct: 810 YFCAGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLEAHRQLAAAIEYEQL 859
>gi|451848446|gb|EMD61752.1| hypothetical protein COCSADRAFT_39456 [Cochliobolus sativus ND90Pr]
Length = 990
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 188/531 (35%), Positives = 262/531 (49%), Gaps = 67/531 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV II+R+ W Y G SS S ++ + L P
Sbjct: 383 QPTARVVGIIKRN--------------WRQYVGHI-DRDSVRSSSKSSRQQQTVFLVPMD 427
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK+ + + + + +R V A ID W ++S +P H + G
Sbjct: 428 KRIPKIRIRTRQAGELLGQR------------VLATIDSWEKDSRYPVGHFVRSLGELES 475
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCI 284
+G E E A+L E + F L CLP W+VP RKDLR+ +
Sbjct: 476 KGAETE----ALLLEWDVQYKPFPKTVLDCLPAEGHDWKVPANMDDPGWRGRKDLRDLLV 531
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL +L +G +VGVHIADVS+FV P A+D EA R T+VY++ +
Sbjct: 532 CSIDPVGCVDIDDALHAHKLPNGNYQVGVHIADVSHFVKPNNAMDKEASQRGTTVYLVDK 591
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP+LL ++ SL P V+R AFS+ W++ D+V ++VIRS SYE AQ
Sbjct: 592 RIDMLPMLLGTDLCSLKPYVERYAFSVIWEMTEDADIVASHFTKSVIRSREAFSYEQAQI 651
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
ID Q + D+ + +++L +SK LK KR GAL L + +
Sbjct: 652 RID-------------------DQSQTDDLTKGMRTLLMLSKKLKQKRMDAGALNLSSPE 692
Query: 465 -PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
V E P D D N L EEFMLLAN + A AFP +ALLRRH AP
Sbjct: 693 VKVRTESETSDPADVQTKKHLDTNSLVEEFMLLANTSVAAKNYEAFPQTALLRRHAAPPK 752
Query: 524 RKLREFE-AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
E + K G+++ T SS SL++ + + F+ L+ ATR M A
Sbjct: 753 TNFEELDNQLKVKKGMEIKTDSSKALADSLDKC---VDPNNPFFNTLVRIMATRCMMSAE 809
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
YFC+G + ++ HY LA +YTHFTSP+RRY DL HR L AA+E E+L
Sbjct: 810 YFCAGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLEAHRQLAAAIEYEQL 859
>gi|332019153|gb|EGI59665.1| DIS3-like exonuclease 2 [Acromyrmex echinatior]
Length = 941
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 257/479 (53%), Gaps = 38/479 (7%)
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
HP+ + + LV+ LP+S+ + + + ID W + F VL V G+ G
Sbjct: 347 HPRDHR-IPLVEILPESVPPSFRDQPELFKDMMFFVSIDLWEQLHAF--GRVLSVVGKYG 403
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
E+ ++ A++ EN + S + L LP + + ++ R+D R+ CIF+IDP+TA
Sbjct: 404 EINTELTAVILENDLDLSPYHESLLKGLPSSDYILTDADMKDREDWRHECIFSIDPATAI 463
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
DLDDALS + L +G +GVHI+DV++++ + LD E R+T+VY+ MLP L
Sbjct: 464 DLDDALSCKILDNGNYEIGVHISDVTHYLKFSSPLDNEVLKRATTVYLPHMTSHMLPEAL 523
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
+V SL G D+LAFS+ W++ +V +TVIRSCC++SYE AQ ++D D E
Sbjct: 524 C-KVCSLFSGKDKLAFSVIWEMTPEAKIVKYRFAKTVIRSCCQMSYESAQAMLD---DPE 579
Query: 414 SSNTLGEGWPQ----LYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF-- 467
S WP+ + G + S + + L+++S L++KRF GAL+L +KP
Sbjct: 580 KS------WPKDFLDIKGDYTISLLSDLVNKLFKLSTQLQNKRFDHGALKL--NKPTLQI 631
Query: 468 -----LFDEYG--TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
L E+G P D + D + L EEFMLLAN T A + A P +ALLR H
Sbjct: 632 RIDPVLSQEHGIPIPVDYYVYESTDSHSLIEEFMLLANMTVATQLYVAIPKTALLRMHKD 691
Query: 521 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD-------ILINYA 573
P+ + L K+G+ L+ ++G S+ +R + +++ V D ++IN
Sbjct: 692 PSKQCLSSLHVMLQKYGIHLNIETAGDLQASI--SRYEPENNSVTVDFMKYITMVIINLC 749
Query: 574 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
++ M A Y C+ D HYAL P+YTHFTSP+RRY D VHR L+A LE + L
Sbjct: 750 SKTMARAEYICAST-TSPYDLKHYALNVPLYTHFTSPIRRYADCTVHRLLSATLENKPL 807
>gi|19113445|ref|NP_596653.1| 3'-5' exoribonuclease subunit Dis3 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|585053|sp|P37202.1|DIS3_SCHPO RecName: Full=Exosome complex exonuclease dis3; AltName:
Full=Chromosome disjunction protein 3; AltName:
Full=Mitotic control protein dis3; AltName:
Full=Ribosomal RNA-processing protein 44
gi|173381|gb|AAA35302.1| mitotic control protein [Schizosaccharomyces pombe]
gi|3650393|emb|CAA21102.1| 3'-5' exoribonuclease subunit Dis3 (predicted) [Schizosaccharomyces
pombe]
Length = 970
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 188/534 (35%), Positives = 273/534 (51%), Gaps = 68/534 (12%)
Query: 113 TKR---PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ 169
TKR PT +VV I++R+ R VG ++ KGGS+ + +
Sbjct: 353 TKRNAHPTAKVVGILKRNWR--PYVGHVDNATIAQSKGGSQ---------------QTVL 395
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
LTP + PK+ + P + +R + ID W+ S +P+ H +
Sbjct: 396 LTPMDRRVPKIRFRTRQAPRLVGRR------------IVVAIDLWDASSRYPEGHFVRDL 443
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEEL----LSRKDLRNFC 283
G E + A+L E + F L CLP W+VP ++ +RKD R+
Sbjct: 444 GEMETKEAETEALLLEYDVQHRPFPKAVLDCLPEEGHNWKVPADKTHPLWKNRKDFRDKL 503
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
I +IDP D+DDAL L +G VGVHIADV++FV P T++D EA R T+VY++
Sbjct: 504 ICSIDPPGCQDIDDALHACVLPNGNYEVGVHIADVTHFVKPNTSMDSEAASRGTTVYLVD 563
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
++I MLP+LL ++ SL P V+R AFS W+++ +++ ++VI S SY AQ
Sbjct: 564 KRIDMLPMLLGTDLCSLRPYVERFAFSCIWEMDENANIIKVHFTKSVIASKEAFSYADAQ 623
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
ID D + + L +G ++ L ++SKILK KR +GAL L +
Sbjct: 624 ARID---DQKMQDPLTQG----------------MRVLLKLSKILKQKRMDEGALNLASP 664
Query: 464 KPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP- 521
+ D E P D + + N L EEFMLLAN + A+ I AFP +A+LRRH AP
Sbjct: 665 EVRIQTDNETSDPMDVEIKQLLETNSLVEEFMLLANISVAQKIYDAFPQTAVLRRHAAPP 724
Query: 522 --NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 578
N L++ C L+ DTS S +SL++ + K+ Y F+ L+ TR M
Sbjct: 725 LTNFDSLQDILRVCKGMHLKCDTSKS--LAKSLDECVDP-KEPY--FNTLLRILTTRCML 779
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
A YFCSG F D+ HY LA P+YTHFTSP+RRY D++ HR L AA++ E +
Sbjct: 780 SAEYFCSGTFA-PPDFRHYGLASPIYTHFTSPIRRYADVLAHRQLAAAIDYETI 832
>gi|344232836|gb|EGV64709.1| hypothetical protein CANTEDRAFT_104041 [Candida tenuis ATCC 10573]
Length = 988
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/471 (36%), Positives = 251/471 (53%), Gaps = 38/471 (8%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
VVL+ + I+ R + +V + +D W S +P H + G E +
Sbjct: 416 FVVLMDTVLPKIRIRTRRAKELLGKRIVIS-VDSWEATSKYPSGHFVRSLGDIESTEAET 474
Query: 240 NAILYENAICCSGFSPESLSCLPCV--PWEVPQ------EELLSRKDLRNFCIFTIDPST 291
A+L E+ + F+ L+CLP W+VP+ E+L RKDLR + +IDP
Sbjct: 475 EALLLEHDVEYRPFATNVLNCLPKEGDKWKVPENLDNGDEQLKKRKDLRGELVCSIDPPN 534
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
D+DDAL + L +G +VGVHIADV++FV TALD E R TSVY++ R+I MLP+
Sbjct: 535 CVDIDDALHAKPLPNGNFQVGVHIADVTHFVKANTALDDEGASRGTSVYLVDRRIDMLPL 594
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
LL + SLNP +DR AFS+ W+++ ++V +++IRS SYE AQ ID K
Sbjct: 595 LLGTNLCSLNPYIDRYAFSVIWEVDKDANIVSVEFTKSIIRSREAFSYEAAQKRIDDK-- 652
Query: 412 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFD 470
S N ++ +S++ L +SK LK KR +GAL L + + V +
Sbjct: 653 --SQN---------------DELTKSMRILLNLSKKLKQKRLNNGALNLASPEVKVHMDS 695
Query: 471 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRKLR 527
E P + + + N L EEFML AN + A I ++P +A+LRRH PA N +L
Sbjct: 696 ETSDPGEVEIKQLLETNSLVEEFMLFANISVARKIYDSYPQTAMLRRHAPPPASNFEQLN 755
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 586
+ + K+G+ + +S SL+ + KD+Y F+ L+ +TR M A YF SG
Sbjct: 756 DMLS-VRKNGMHISLENSKALADSLDNCIDP-KDEY--FNTLVRIMSTRCMMAAEYFPSG 811
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
F +D+ HY LA +YTHFTSP+RRY D+VVHR L A+ E L HR
Sbjct: 812 -FFGYSDFKHYGLAVDIYTHFTSPIRRYCDIVVHRQLAGAIGYEDLAQSHR 861
>gi|300772611|ref|ZP_07082481.1| ribonuclease R [Sphingobacterium spiritivorum ATCC 33861]
gi|300760914|gb|EFK57740.1| ribonuclease R [Sphingobacterium spiritivorum ATCC 33861]
Length = 709
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 165/437 (37%), Positives = 226/437 (51%), Gaps = 35/437 (8%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
E V I EW + S P V V G+ GE ++NAIL + S F PE
Sbjct: 185 EKVVVSITEWPKGSKNPVGRVKDVLGKKGENNTEMNAILADYGFPLS-FPPEVEKEANSF 243
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
+ E+ R+D R FTIDP+ A D DDA+S ++L +G +GVHIADVS+FV P
Sbjct: 244 SAVIDNTEIRKRRDFRTIPTFTIDPADAKDFDDAISFQQLPNGHYEIGVHIADVSHFVKP 303
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
TALD EA R+TSVY++ R IPMLP LS ++ SL P DRL FS ++L+ ++ D+
Sbjct: 304 DTALDKEAFERATSVYLVDRVIPMLPERLSNDLCSLRPNEDRLCFSAVFELDDKANIHDQ 363
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 444
W GRTVI S + SYE AQ++I+ K D I L E+
Sbjct: 364 WFGRTVIHSDRRFSYEEAQEVIENK---------------------TGDFTTEILKLNEL 402
Query: 445 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 504
+ IL++K+F +GA+ E+ + F DE G P R+D + L E+FMLLAN+ AE
Sbjct: 403 AYILREKKFKNGAISFESEEVKFTLDENGKPTGVYTKVRKDAHKLIEDFMLLANRKVAEY 462
Query: 505 IARAFPDSALL----RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 560
I + L R H PN L F F S+ G +L S + +SL K++
Sbjct: 463 IGKQGKGKNKLTFVYRFHDLPNPETLTTFSQFASRFGHKLTIRSDKETAKSLNALMTKIE 522
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
++L + A R M A Y + HY LAF YTHFTSP+RRYPD++VH
Sbjct: 523 GSKEQ-NLLTSLAVRSMAKAVYTTK-------NTSHYGLAFDYYTHFTSPIRRYPDVMVH 574
Query: 621 RTLNAALE-AEKLYWKH 636
R L L+ +K+ +H
Sbjct: 575 RLLQFYLDGGQKVNAEH 591
>gi|40225951|gb|AAH14124.2| DIS3L protein [Homo sapiens]
Length = 644
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 179/551 (32%), Positives = 280/551 (50%), Gaps = 65/551 (11%)
Query: 226 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLR- 280
+ V GR G++E +I IL EN+I FS + +P PW+V EE RKDLR
Sbjct: 1 VRVLGRIGDLEGEIATILVENSISVIPFSEAQMCEMPVNTPESPWKVSPEEEQKRKDLRK 60
Query: 281 NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVY 340
+ +F+IDP D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y
Sbjct: 61 SHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYY 120
Query: 341 MLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSY 399
+ R+ MLP +LS ++ SL GVDR A SI W+L+ A ++ W GRT+IRS KL Y
Sbjct: 121 LADRRYDMLPSVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFY 180
Query: 400 EHAQDIIDGKF----DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 455
E AQ+++DG D+ LGE Q + ++V +I L ++++ ++ KR
Sbjct: 181 EAAQELLDGNLSVVDDIPEFKDLGEK----SRQAKLEELVWAIGKLTDIARHVRAKRDGC 236
Query: 456 GALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 515
GAL LE + D+ +D + +++ E M+LAN A+ I +FP ALL
Sbjct: 237 GALELEGVEVCVQLDDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALL 296
Query: 516 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 575
R+HP P+ E G +DT S+ SL+ A + D ++ +L + AT+
Sbjct: 297 RQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDNAND--PHDPIVNRLLRSMATQ 354
Query: 576 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWK 635
M A YF +G ++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ K
Sbjct: 355 AMSNALYFSTGSCAEE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAIS------K 407
Query: 636 HRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHC 695
++M K N +F +KD E + H
Sbjct: 408 DKKMEIKGN------------LFSNKDLEE-------------------------LCRHI 430
Query: 696 NDRKLACRNVKDACVKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERR 750
N+R A ++ + +L+ + K K E +S+ + ++ + ++I + I+
Sbjct: 431 NNRNQAAQHSQKQSTELFQCMYFKDKDPATEERCISDGVIYSIRTNGVLLFIPRFGIKGA 490
Query: 751 IYYDEVEGLIV 761
Y +GL++
Sbjct: 491 AYLKNKDGLVI 501
>gi|325103978|ref|YP_004273632.1| RNAse R [Pedobacter saltans DSM 12145]
gi|324972826|gb|ADY51810.1| RNAse R [Pedobacter saltans DSM 12145]
Length = 705
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/424 (36%), Positives = 225/424 (53%), Gaps = 34/424 (8%)
Query: 208 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE 267
A+I +W EE+ P + V G+ GE + ++NAIL E + F E +
Sbjct: 183 VAKIVDWPEEAKNPVGVIKSVLGKEGENDTEMNAILAEYGFPLN-FPAEVEHEANSISDT 241
Query: 268 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 327
+ QEE+ R+D R+ FTIDP A D DDA+S ++L +G +GVHIADVS++V P ++
Sbjct: 242 ISQEEIKKRRDFRDTLTFTIDPFDAKDFDDAISFKKLENGNYEIGVHIADVSHYVQPESS 301
Query: 328 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 387
LD EA R TSVY++ R IPMLP LS + SL P D+L+FS +++N +++ W G
Sbjct: 302 LDKEAFERGTSVYLVDRVIPMLPERLSNNLCSLRPLEDKLSFSAVFEINDEAQILNEWYG 361
Query: 388 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 447
+TVI S + +YE AQ+II+ E + I +L +++ I
Sbjct: 362 KTVINSNRRFTYEEAQEIIEN---------------------ESGEYAEEIITLNKLAYI 400
Query: 448 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 507
L+DKRF GA+ E+++ F DE G P + R+D + L E+FMLLAN+ AE I++
Sbjct: 401 LRDKRFKQGAINFESAEVKFKLDENGKPIGVYVKERKDAHKLIEDFMLLANRKVAEFISK 460
Query: 508 AFPDSALL----RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY 563
L R H +PNM L F F S+ G ++ T S +SL + ++
Sbjct: 461 KGKGKHRLTFVYRAHDSPNMETLNTFSQFASRFGYKISTKSDRDISRSLNKLMADVEGKK 520
Query: 564 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
++L A R M A Y HY LAF YTHFTSP+RRYPD++VHR L
Sbjct: 521 EQ-NVLTQLAIRSMAKAIYTTKSS-------SHYGLAFDFYTHFTSPIRRYPDVLVHRLL 572
Query: 624 NAAL 627
L
Sbjct: 573 EHYL 576
>gi|13446610|emb|CAC35051.1| putative exoribonuclease DIS3 [Drosophila melanogaster]
Length = 983
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 177/546 (32%), Positives = 273/546 (50%), Gaps = 64/546 (11%)
Query: 91 SSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSR 150
+ +N+ +N + +A +S+ T PTGR+V I+ R +W Y G +
Sbjct: 327 AKDENEMLNQVR--AAALSAERT--PTGRIVGIVRR--------------KWRQYCGILQ 368
Query: 151 KDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAAR 210
+ D P K P++ + + A ++ + +
Sbjct: 369 PSL--------IEDTNRHIFVPADRKIPRIRIETRQA------------AMLQNQRIIVT 408
Query: 211 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ 270
ID W S +P H + G G++ + IL E+ + FS E LS LP +PW +
Sbjct: 409 IDTWPRNSRYPHGHFVRSLGPLGDMATENEVILLEHDVPHCKFSDEVLSFLPKMPWTITD 468
Query: 271 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 330
E+ R DLR+ I ++DP TD+DDAL L +G VGVHIADVS+F+ PG
Sbjct: 469 EDYSKRVDLRDLYICSVDPPGCTDIDDALHCRELPNGNLEVGVHIADVSHFIRPGKRTGH 528
Query: 331 EAQ-VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 389
T+VY++ ++I M+P LLS + SL GV+R AFS W++++ +V+ + ++
Sbjct: 529 GGSGPGETTVYLVGKRIDMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLSKRFHKS 588
Query: 390 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 449
VI+S ++YE AQ+IID D N ++ +S+++L ++KILK
Sbjct: 589 VIKSKRAMTYEEAQNIID---DATQQN----------------EIAKSLRNLNRLAKILK 629
Query: 450 DKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
+R +GAL L + + F D E P + + + N + EEFMLLAN T AE IA
Sbjct: 630 KRRMDNGALVLASPEIRFQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIATE 689
Query: 509 FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 568
F + A+LRRHP P G Q+D +S + SL++ +K D F+
Sbjct: 690 FSECAVLRRHPRPPPTNFDPLVKSARYQGFQVDINSGLELSHSLDKC---VKADNPYFNT 746
Query: 569 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
+I TR M A YF SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A++
Sbjct: 747 MIRILTTRCMMQAVYFISGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASI 805
Query: 628 EAEKLY 633
A+ Y
Sbjct: 806 GADSTY 811
>gi|328786997|ref|XP_397381.4| PREDICTED: exosome complex exonuclease RRP44-like [Apis mellifera]
Length = 978
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 182/556 (32%), Positives = 273/556 (49%), Gaps = 60/556 (10%)
Query: 81 STSDSTEKVSSSQQNDGMNAIERLSAMISSYPT-KRPTGRVVSIIERSPRRDGIVGFLNV 139
S SD + +D + + L ISS K PTG++V II R+ R+ G L
Sbjct: 297 SPSDIILQDEEETDDDVLETKKILDKFISSNKMEKSPTGKIVGIIRRNWRQ--YCGILQS 354
Query: 140 NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGD 199
N N +G R P K PK+ + + K+R+
Sbjct: 355 N---NIEGNVRH-----------------VFIPAERKIPKIRIETRQYGILSKQRI---- 390
Query: 200 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 259
+VA ID W S +P H + G G+ + IL E+ I S FS LS
Sbjct: 391 ------IVA--IDSWPRNSRYPLGHFVRALGEIGDKTTENEVILLEHDIPHSRFSDAVLS 442
Query: 260 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 319
LP +PW + +L R+D R+ + ++DP TD+DDAL LS+G VGVHIADV+
Sbjct: 443 SLPKMPWCITDSDLAQREDFRHLDVCSVDPPGCTDIDDALHCRYLSNGNLEVGVHIADVT 502
Query: 320 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 379
+F+ PGT LD EA +RST+VY++ +I MLP LLS + SL +RL FS W+++
Sbjct: 503 HFMRPGTPLDKEAALRSTTVYLVDTRIHMLPDLLSSNLCSLREKEERLTFSCIWEMDEDA 562
Query: 380 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 439
++++ +++I S ++Y+ AQ ID F +S + +S++
Sbjct: 563 NIINTRYCKSIIYSRAAMTYDEAQLKIDDAFQQDS-------------------LSKSLR 603
Query: 440 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 498
+L ++K L+ +R +GAL L + + F D E P D + N + EEFMLLAN
Sbjct: 604 NLNSLAKKLRKRRLENGALVLASPEIRFQVDCETHDPIDIEAKKLRETNSMVEEFMLLAN 663
Query: 499 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
+ A+ I FP+ A+LRRHP P G ++ +S + +SL+
Sbjct: 664 ISVAKKILEEFPECAILRRHPEPPPSNFEPLIKAAKNQGFIINVNSGKKLAESLDNCH-- 721
Query: 559 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
K+ F+ ++ ATR M A YF SG +++ HY LA P+YTHFTSP+RRY D+
Sbjct: 722 -KESNPYFNTMLRILATRCMMQAIYFISG-MHQQSEYYHYGLASPIYTHFTSPIRRYADV 779
Query: 618 VVHRTLNAALEAEKLY 633
+VHR L + A+ Y
Sbjct: 780 MVHRLLAVCIGADATY 795
>gi|451998902|gb|EMD91365.1| hypothetical protein COCHEDRAFT_1175213 [Cochliobolus
heterostrophus C5]
Length = 978
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 188/531 (35%), Positives = 262/531 (49%), Gaps = 67/531 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV II+R+ W Y G SS S ++ + L P
Sbjct: 371 QPTARVVGIIKRN--------------WRQYVGHI-DRDSVRSSSKSSRQQQTVFLVPMD 415
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK+ + + + + +R V A ID W ++S +P H + G
Sbjct: 416 KRIPKIRIRTRQAGELLGQR------------VLATIDSWEKDSRYPVGHFVRSLGELES 463
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCI 284
+G E E A+L E + F L CLP W+VP RKDLR+ +
Sbjct: 464 KGAETE----ALLLEWDVQYKPFPKTVLDCLPAEGHDWKVPANMDDPGWRGRKDLRDLLV 519
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL +L +G +VGVHIADVS+FV P A+D EA R T+VY++ +
Sbjct: 520 CSIDPVGCVDIDDALHAHKLPNGNYQVGVHIADVSHFVKPNNAMDKEASQRGTTVYLVDK 579
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP+LL ++ SL P V+R AFS+ W++ D+V ++VIRS SYE AQ
Sbjct: 580 RIDMLPMLLGTDLCSLKPYVERYAFSVIWEMTEDADIVASHFTKSVIRSREAFSYEQAQI 639
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
ID Q + D+ + +++L +SK LK KR GAL L + +
Sbjct: 640 RID-------------------DQSQDDDLTKGMRTLLMLSKKLKQKRMDAGALNLSSPE 680
Query: 465 -PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
V E P D D N L EEFMLLAN + A AFP +ALLRRH AP
Sbjct: 681 VKVRTESETSDPADVQTKKHLDTNSLVEEFMLLANTSVAAKNYEAFPQTALLRRHAAPPK 740
Query: 524 RKLREFE-AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
E + K G+++ T SS SL++ + + F+ L+ ATR M A
Sbjct: 741 TNFEELDNQLKVKKGMEIKTDSSKALADSLDKC---VDPNNPFFNTLVRIMATRCMMSAE 797
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
YFC+G + ++ HY LA +YTHFTSP+RRY DL HR L AA+E E+L
Sbjct: 798 YFCAGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLEAHRQLAAAIEYEQL 847
>gi|429849578|gb|ELA24947.1| exosome complex exonuclease exoribonuclease [Colletotrichum
gloeosporioides Nara gc5]
Length = 953
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 192/522 (36%), Positives = 259/522 (49%), Gaps = 59/522 (11%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT +VV II+R+ R+ VG ++ + G RK ++ + L P
Sbjct: 374 QPTAKVVGIIKRNWRQ--YVGHIDPSSASKSGGQGRK-------------QDNVFLIPMD 418
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ PK+ + + + + + KRL LV ID W +S P H + G
Sbjct: 419 RRIPKIKLRSRQVSELLGKRL----------LVT--IDAWERDSRHPVGHFVRSLGELET 466
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCIFTID 288
+ A+L E + F L CLP W VPQ R+DLR I +ID
Sbjct: 467 KAAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWRVPQSTEDPGWRDREDLRKLLICSID 526
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P D+DDAL L +G VGVHIADVS+FV PG A+D EA +R T+VY++ ++I M
Sbjct: 527 PIGCQDIDDALHARPLPNGNFEVGVHIADVSHFVKPGNAMDTEASLRGTTVYLVDKRIDM 586
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP+LL ++ SL P V+R AFS W++NS DVV ++VI+S SYE AQ ID
Sbjct: 587 LPMLLGTDLCSLKPYVERYAFSCIWEMNSNADVVSVRFTKSVIQSKEAFSYEAAQLRID- 645
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVF 467
+G Q D+ SI++L +SK LK KR GAL L + + V
Sbjct: 646 -----------DGSQQ-------DDLTNSIRTLLALSKKLKQKRMDAGALSLSSPEVKVQ 687
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
+ E P D D L EEFMLLAN + A I AFP +A+LRRH AP
Sbjct: 688 MESETSDPIDVKTKQHLDTMSLVEEFMLLANVSVATKIHEAFPQTAILRRHGAPPKTNFD 747
Query: 528 EF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCS 585
E + K GL+L SS SL+ + F+ L+ ATR M A YFCS
Sbjct: 748 ELADQLRVKKGLELRVDSSKALADSLDTCVDPANP---FFNTLVRIMATRCMMSAEYFCS 804
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
G + ++ HY LA +YTHFTSP+RRY DLV HR L AA+
Sbjct: 805 GT-QAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAI 845
>gi|255037464|ref|YP_003088085.1| ribonuclease R [Dyadobacter fermentans DSM 18053]
gi|254950220|gb|ACT94920.1| ribonuclease R [Dyadobacter fermentans DSM 18053]
Length = 795
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 255/498 (51%), Gaps = 44/498 (8%)
Query: 144 NYKGGSRKDAKKNRSSLSVPD------REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEE 197
N + R D+ +NR+ V D E + + +P++ + K L D I ++
Sbjct: 146 NLRSKGRGDSGRNRTEGRVTDIVERSNAEIVGIIEINPRFAVVQPDNKRLYDPIYLEPDQ 205
Query: 198 GDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPES 257
A + V ++ EW+ + ++ V G G + +++AIL E + F E
Sbjct: 206 VGAARHGDKVIVKVTEWSTRRSQAEGEIVSVLGAAGNNDVEMHAILAEFGLPYH-FPDEV 264
Query: 258 LSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 317
+ +P ++ +++L R+D+R+ FTIDP A D DDALS+ L + + VGVHIAD
Sbjct: 265 EAEAQKIPNKIVKKDLAKRRDIRDVLTFTIDPVDAKDFDDALSVRYLDEDVVEVGVHIAD 324
Query: 318 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 377
VS++VLPGT L+ EA R+TSVY++ R +PMLP LS + SL P DRLAFS +++ S
Sbjct: 325 VSHYVLPGTELEKEALRRATSVYLVDRTVPMLPEKLSNNLCSLRPNEDRLAFSAIFEITS 384
Query: 378 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 437
G ++ W GRTVI S + +YE AQ ++D GEG D +
Sbjct: 385 KGKLLKEWFGRTVIHSDRRFTYEEAQAVLDS----------GEG-----------DFPKE 423
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 497
+ +L +++KI + +RF GA+ E + F D G P R D N L EEFMLLA
Sbjct: 424 LDTLNKLAKIFRKERFKKGAINFETPEVRFRLDPEGRPLGIYTKERHDSNKLIEEFMLLA 483
Query: 498 NKTAAEVIARAF----PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
NK AE + ++ + R H AP+ +L+ F F +K GL+L+ + +S+
Sbjct: 484 NKRVAEYVYSLSKGEDKNTMVYRIHEAPDPDRLQTFANFVAKLGLKLEVEEESKIAKSMN 543
Query: 554 QAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 611
K+ K + L + L A R M A Y D GH+ LAF Y+HFTSP+
Sbjct: 544 AMLAKVEGKPEQNLIESL---AVRTMAKARYSTE-------DLGHFGLAFRRYSHFTSPI 593
Query: 612 RRYPDLVVHRTLNAALEA 629
RRYPD++ HR L L+
Sbjct: 594 RRYPDVMAHRLLQHYLDG 611
>gi|402580871|gb|EJW74820.1| hypothetical protein WUBG_14271 [Wuchereria bancrofti]
Length = 401
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/324 (45%), Positives = 198/324 (61%), Gaps = 16/324 (4%)
Query: 213 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP---CVPWEVP 269
EW + F + + G G++E + +L N + FS +LS LP V W++
Sbjct: 3 EWQATAQFARGKLYKSLGLAGDIEAETEGLLLANDVDTREFSQAALSSLPITEAVEWKID 62
Query: 270 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS--DGIS----RVGVHIADVSYFVL 323
++E RKD R+ +FTIDPSTA DLDDAL I+ +S DG VGVHIADVS+FV
Sbjct: 63 EKEFKYRKDFRDETVFTIDPSTARDLDDALHIKPISNCDGAGNPGWEVGVHIADVSHFVQ 122
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
GT LD A R TSVY++ + IPMLP +L EE+ SLNP VDRL FS+ W +N G++ D
Sbjct: 123 FGTELDHWAFNRGTSVYLVHKVIPMLPQMLCEELCSLNPDVDRLTFSVVWKINDQGEIFD 182
Query: 384 RWIGRTVIRSCCKLSYEHAQD-IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
W GRT+IRSCCKLSYEHAQD I++ + D SS P+++ + +V +I L
Sbjct: 183 EWFGRTIIRSCCKLSYEHAQDFIVNPEKDFVSSEL-----PKIFNGKKSDEVKEAILRLN 237
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTA 501
+++ IL+ KRF +G++ E K F DE G P LS R++ NFL EEFMLLAN
Sbjct: 238 KIAVILRKKRFENGSINFEMPKLNFTLDETSGMPNGLCLSERKEANFLVEEFMLLANMAV 297
Query: 502 AEVIARAFPDSALLRRHPAPNMRK 525
A I +FP +ALLRRHP P ++K
Sbjct: 298 ARKIELSFPKTALLRRHPPPKIKK 321
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 6/81 (7%)
Query: 270 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS--DGIS----RVGVHIADVSYFVL 323
++E RKD R+ +FTIDPSTA DLDDAL I+ +S DG VGVHIADVS+FV
Sbjct: 320 KKEFKYRKDFRDETVFTIDPSTARDLDDALHIKPISNCDGAGNPGWEVGVHIADVSHFVQ 379
Query: 324 PGTALDIEAQVRSTSVYMLQR 344
GT LD A R TSVY++ +
Sbjct: 380 FGTELDHWAFNRGTSVYLVHK 400
>gi|358367033|dbj|GAA83653.1| mitotic control protein Dis3 [Aspergillus kawachii IFO 4308]
Length = 1033
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 279/563 (49%), Gaps = 69/563 (12%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 142
+D TE V S ++ + R + SS +PT +VV +++R+ R+ VG ++
Sbjct: 347 TDDTEAVVSERERKALQEEVRKAHGKSSEGKPQPTAKVVGVMKRNWRQ--YVGHVDA--- 401
Query: 143 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
G + A R ++ + + P + PK+ V + D + +R+
Sbjct: 402 ----GSAGAQASSGRR------QQTVFVLPMDKRVPKIRVRTRQAGDLMGQRI------- 444
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 258
LV ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ---LVT--IDAWDRDSRYPTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPKAVL 495
Query: 259 SCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
CLP W VP + R+DLR+ I +IDP D+DDAL L +G VG
Sbjct: 496 DCLPAEGHDWRVPASKDNIGWKGRRDLRDLLICSIDPPGCQDIDDALHARPLPNGNFEVG 555
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVS+FV P A+D+EA +R T+VY++ ++I MLP LL ++ SL P V+R AFS+
Sbjct: 556 VHIADVSHFVKPNNAMDLEASLRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVL 615
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W++ +VV ++VIRS SYE AQ ID D + L E
Sbjct: 616 WEMTPNAEVVSADFTKSVIRSREAFSYEKAQKRID---DPTQKDELTE------------ 660
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFL 489
S+++L SKIL+ KR GAL L + + DE G P V + + N L
Sbjct: 661 ----SMRTLLRFSKILRQKRMDAGALNLASPEVRIETDNDEVGDPLTDVKTKAMLETNSL 716
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQF 548
EEFML AN T A I F +A+LRRH P + E K ++LD SSS
Sbjct: 717 VEEFMLHANITVASKIYSTFSQTAMLRRHATPPPQNFEELINQLTKKRNMRLDVSSSRAL 776
Query: 549 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 607
SL++ + + F+ L+ ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 777 ADSLDRC---VDEKNPFFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHF 832
Query: 608 TSPLRRYPDLVVHRTLNAALEAE 630
TSP+RRY DL+VHR L +A+ E
Sbjct: 833 TSPIRRYADLLVHRQLASAIGYE 855
>gi|171687865|ref|XP_001908873.1| hypothetical protein [Podospora anserina S mat+]
gi|170943894|emb|CAP69546.1| unnamed protein product [Podospora anserina S mat+]
Length = 1009
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 189/567 (33%), Positives = 276/567 (48%), Gaps = 60/567 (10%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+P +S + VS ++ ++R + + + PT +VV +I+R+ R+ VG
Sbjct: 361 KNENPDAEESDDFVSERERKALQEEVKRTHSKTTEGHAQ-PTAKVVGVIKRNWRQ--YVG 417
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
++ + RK ++ + + P K PK+ + + + + + KR
Sbjct: 418 HIDQSSVSQSAQQGRK-------------QDSVFVIPMDKKIPKIRLRTRQVSELLGKR- 463
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
+ ID W+ S P H + G + A+L E + F
Sbjct: 464 -----------ILVTIDAWDRSSRHPSGHFVRSLGELETKAAETEALLLEYDVQYRPFPK 512
Query: 256 ESLSCLPCV--PWEVPQE----ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 309
L CLP W VPQ R+DLR+ I +IDP D+DDAL L +G
Sbjct: 513 TVLDCLPKEGHDWRVPQSLEDPGWKDRQDLRDLLICSIDPIGCQDIDDALHSRPLPNGNF 572
Query: 310 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 369
VGVHIADVS+FV PG A+D EA +R T+VY++ ++I MLP+LL ++ SL P V+R AF
Sbjct: 573 EVGVHIADVSHFVKPGNAMDAEASIRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVERYAF 632
Query: 370 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 429
S+ W++ S D+V ++VI+S SYE AQ +D +SS
Sbjct: 633 SVIWEMTSDADIVGSRFTKSVIKSREAFSYEQAQLRVD-----DSS-------------- 673
Query: 430 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNF 488
+ ++ SI++L +SK LK KR GAL L + + V + E P D D
Sbjct: 674 QQDELTTSIRTLLALSKKLKQKRLDAGALSLSSPEVKVQMESETSDPIDVKTKVHLDTMS 733
Query: 489 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQ 547
L EEFMLLAN + A I AFP +A+LRRH AP E K GL L SS
Sbjct: 734 LVEEFMLLANTSVARRIYEAFPQTAILRRHGAPPKTNFDELANQLKVKRGLDLSVESSRA 793
Query: 548 FHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTH 606
SL++ + + F+ L+ ATR M A YFCSG + ++ HY LA +YTH
Sbjct: 794 LADSLDRC---VDEKEPFFNTLVRIMATRCMMSAEYFCSGT-QAYPEFRHYGLASEIYTH 849
Query: 607 FTSPLRRYPDLVVHRTLNAALEAEKLY 633
FTSP+RRY DL+ HR L AA+E E ++
Sbjct: 850 FTSPIRRYADLMAHRQLAAAIEYEAIH 876
>gi|160333118|ref|NP_001103928.1| DIS3-like exonuclease 1 [Danio rerio]
gi|166201902|sp|A2RV18.1|DI3L1_DANRE RecName: Full=DIS3-like exonuclease 1
gi|124481655|gb|AAI33137.1| DIS3 mitotic control homolog (S. cerevisiae)-like [Danio rerio]
Length = 1057
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 196/660 (29%), Positives = 318/660 (48%), Gaps = 94/660 (14%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++R+ RD +V + + S+K I + P
Sbjct: 324 PTGRVVEILQRN-WRDYVVTLPPFEEMQSQSRNSQK----------------ILVVPWDY 366
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A ++ + V R+D W S +P H + V G+ GE+
Sbjct: 367 RIPK-----------IRISTQQAEA-LQDQRVIVRLDSWESTSVYPNGHFVRVLGKSGEL 414
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLRN-FCIFTIDPS 290
E +I IL EN I FS L +P PW++ E+ SR+DLR+ +F+IDP
Sbjct: 415 ETEIQTILVENCIHVPPFSEAQLREMPVNTEENPWQMDSNEVSSRRDLRDSHLVFSIDPK 474
Query: 291 TATDLDDALSIERLSDGIS-RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
D+DD LS+ L G +GVHIADV++FV G+ D+EA+ R+T+ Y+ R+ ML
Sbjct: 475 GCEDVDDTLSVRTLPGGKRLELGVHIADVTHFVREGSLTDLEARSRATTYYLADRRYDML 534
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
P +LS ++ SL GVDR A S+ W+L++ +V W GRT+IRS +L YE AQ +++G
Sbjct: 535 PAVLSADLCSLLGGVDRYAMSVLWELDAETLEVCSVWFGRTLIRSSYQLHYELAQSLLNG 594
Query: 409 -KFDVESSNTL-GEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
+ +V N L G Q + S++++++++L V++ L+ +R GAL LE +
Sbjct: 595 EEVEVPELNPLKGSQRDQ-----KMSELLQALETLTRVARHLRAQRDKGGALELEGVEVR 649
Query: 467 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
DE V +++ E M+ AN A I +FP ALLR HP P
Sbjct: 650 AQLDEEKNITALVPKQPLEVHETVAECMIYANHWVARKIQESFPHHALLRHHPPPKQEFF 709
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 586
HG +DT S+ SLE+A + D ++ +L AT+ M A YF +G
Sbjct: 710 NHLIDSAKAHGFSIDTRSNRALADSLERAVD--PRDPLVNRLLRMMATQAMSNALYFSTG 767
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 646
++ + HY LA YTHFTSP+RRY D++VHR L AA++ EK
Sbjct: 768 SCPEE-QYYHYGLALARYTHFTSPIRRYADVIVHRLLMAAVQLEK--------------- 811
Query: 647 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVK 706
D+ +++L C L +A H N++ A ++ +
Sbjct: 812 -------------DESPSKAL---------------ACNKELEELAQHINNKNRAAQHSQ 843
Query: 707 DACVKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
++L+ + + K E +++A + A+ ++ + ++ +Y + EG ++
Sbjct: 844 KQSIELFQCMYFRDKDSHTDERCVADAVIYAVRANGFLAFVPQYGLKGAVYLKDREGQVI 903
>gi|336366467|gb|EGN94814.1| hypothetical protein SERLA73DRAFT_171208 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379157|gb|EGO20313.1| hypothetical protein SERLADRAFT_452990 [Serpula lacrymans var.
lacrymans S7.9]
Length = 995
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 193/558 (34%), Positives = 268/558 (48%), Gaps = 74/558 (13%)
Query: 108 ISSYPT-KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVPD 164
IS PT K+PTGRVV +I+R+ W Y S N +SLS
Sbjct: 367 ISKRPTEKQPTGRVVGVIKRN--------------WRAYVCHIDSTSLTSTNATSLS--- 409
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
++ + TP P++ + + P I ++ + ID W S +P+ H
Sbjct: 410 QQTVFATPVSRLLPRIRLRTRQAPSLIGQK------------ILVTIDRWESTSRYPEGH 457
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE-----ELLSRK 277
+ G+ E + ++L E + F L CLP W VP + E R+
Sbjct: 458 FVRALGKAESKEAEQESLLLEFEVPYRPFGKAILDCLPSEGEQWVVPPKSDRSPEWRDRE 517
Query: 278 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 337
DLR I +IDP D+DDAL RLS+G GVHIADVS+FV T +D EA R T
Sbjct: 518 DLRGLIICSIDPPGCQDIDDALHARRLSNGNIEAGVHIADVSHFVHSDTPMDSEAASRGT 577
Query: 338 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKL 397
+VY++ ++I MLP LL + SL P V+RLAFS W++ ++V+ ++VI S
Sbjct: 578 TVYLVDKRIDMLPALLGTNLCSLRPYVERLAFSAIWEMTPEAEIVNVRFTKSVIASKAAF 637
Query: 398 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 457
+YE AQ D P L ++ +SI+ L +++ LK R GA
Sbjct: 638 TYEEAQIRKDD--------------PHLQ-----DELTQSIRLLNSLAQKLKAGRMAAGA 678
Query: 458 LRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 515
L L + + D E P D + N L EEFMLLAN + A+ I FP +A+L
Sbjct: 679 LNLASPEVKIHLDSSESSDPIDVEQKEMRETNSLVEEFMLLANVSVAKKIQDTFPQTAVL 738
Query: 516 RRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN- 571
RRH P N KL++ + GL LD SSSG SL++ + F+ L+
Sbjct: 739 RRHLPPPRTNFEKLQDI--LQKRKGLTLDVSSSGALAASLDKC---IDAKEPAFNTLVRI 793
Query: 572 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
ATR M A YF SG DT +GHY LA P+YTHFTSP+RRY D++ HR L+AA+
Sbjct: 794 MATRCMLSAEYFSSGSVSRDT-FGHYGLASPIYTHFTSPIRRYADVLAHRQLSAAIG--- 849
Query: 632 LYWKHRRMLPKNNHREGV 649
+W L H E V
Sbjct: 850 -FWPLHATLHSKAHVERV 866
>gi|225679717|gb|EEH18001.1| ribonuclease R [Paracoccidioides brasiliensis Pb03]
Length = 950
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 192/563 (34%), Positives = 277/563 (49%), Gaps = 72/563 (12%)
Query: 84 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 143
+ E V + ++ + R + + ++ +PT RVV I++R+ W
Sbjct: 262 EEKEAVVTEKERRALQVEVRKAHVKTTEGRPQPTARVVGIVKRN--------------WR 307
Query: 144 NYKGGSRKDAKKNRSSLSVPDR--EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT 201
Y G K + ++ P R + + + P + PK+ + + + +R
Sbjct: 308 QYVGNIDKISTAAQAQ---PGRRQQTVFVIPMDKRIPKIRIRTRQAQELFGQR------- 357
Query: 202 IEMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPES 257
+ +D W+ +S +P H + G +G E E A+L E + F
Sbjct: 358 -----ILVTVDAWDRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPQIV 408
Query: 258 LSCLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRV 311
L CLP W+VPQ RKDLR + +IDP D+DDAL L +G V
Sbjct: 409 LDCLPPEGHNWKVPQNMDDPGWHDRKDLRELLVCSIDPPGCQDIDDALHARPLPNGNIEV 468
Query: 312 GVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSI 371
GVHIADVS+FV P T +D EA +R T+VY++ ++I MLP+LL ++ SL P V R AFS
Sbjct: 469 GVHIADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVQRYAFST 528
Query: 372 FWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEW 431
W++ + +VV ++VI S SYE AQ ID D+ ++ L E
Sbjct: 529 IWEMTPSAEVVSSSCTKSVIFSREAFSYEQAQLRID---DISKTDELTE----------- 574
Query: 432 SDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFL 489
S+++L ++SK+LK KR GAL L + + D E P V + + N L
Sbjct: 575 -----SMRTLSKLSKLLKQKRMDAGALNLASPEVRIETDSELSDPVADVKTKALLETNSL 629
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQF 548
EEFMLLAN T A I +AFP +A+LRRH P E A S K + LD SSS
Sbjct: 630 VEEFMLLANITVASKIFKAFPQTAMLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLAL 689
Query: 549 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 607
SL++ + F+ LI ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 690 ATSLDRCVDPANP---FFNTLIRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHF 745
Query: 608 TSPLRRYPDLVVHRTLNAALEAE 630
TSP+RRY DLVVHR L AA+ E
Sbjct: 746 TSPIRRYADLVVHRQLAAAIGYE 768
>gi|134055287|emb|CAK96177.1| unnamed protein product [Aspergillus niger]
Length = 1021
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 279/563 (49%), Gaps = 69/563 (12%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 142
+D TE V S ++ + R + SS +PT +VV +++R+ R+ VG ++
Sbjct: 347 TDDTEAVVSERERKALQEEVRKAHGKSSEGKPQPTAKVVGVMKRNWRQ--YVGHVDA--- 401
Query: 143 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
G + A R ++ + + P + PK+ V + D + +R+
Sbjct: 402 ----GSAGAQASSGRR------QQTVFVLPMDKRVPKIRVRTRQAGDLMGQRI------- 444
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 258
LV ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ---LVT--IDAWDRDSRYPTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPKAVL 495
Query: 259 SCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
CLP W VP + R+DLR+ I +IDP D+DDAL L +G VG
Sbjct: 496 DCLPAEGHDWRVPASKDNIGWKGRRDLRDLLICSIDPPGCQDIDDALHARPLPNGNFEVG 555
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVS+FV P A+D+EA +R T+VY++ ++I MLP LL ++ SL P V+R AFS+
Sbjct: 556 VHIADVSHFVKPNNAMDLEASLRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVL 615
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W++ +VV ++VIRS SYE AQ ID D + L E
Sbjct: 616 WEMTPDAEVVSADFTKSVIRSREAFSYEKAQKRID---DPTQKDELTE------------ 660
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFL 489
S+++L SKIL+ KR GAL L + + DE G P V + + N L
Sbjct: 661 ----SMRTLLRFSKILRQKRMDAGALNLASPEVRIETDNDEVGDPLTDVKTKAMLETNSL 716
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQF 548
EEFML AN T A I F +A+LRRH P + E K ++LD SSS
Sbjct: 717 VEEFMLHANITVASKIYSTFSQTAMLRRHATPPPQNFEELINQLTKKRDMRLDVSSSRAL 776
Query: 549 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 607
SL++ + + F+ L+ ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 777 ADSLDRC---VDEKNPFFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHF 832
Query: 608 TSPLRRYPDLVVHRTLNAALEAE 630
TSP+RRY DL+VHR L +A+ E
Sbjct: 833 TSPIRRYADLLVHRQLASAIGYE 855
>gi|226291462|gb|EEH46890.1| mitotic control protein dis3 [Paracoccidioides brasiliensis Pb18]
Length = 1037
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 192/563 (34%), Positives = 277/563 (49%), Gaps = 72/563 (12%)
Query: 84 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 143
+ E V + ++ + R + + ++ +PT RVV I++R+ W
Sbjct: 349 EEKEAVVTEKERRALQVEVRKAHVKTTEGRPQPTARVVGIVKRN--------------WR 394
Query: 144 NYKGGSRKDAKKNRSSLSVPDR--EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT 201
Y G K + ++ P R + + + P + PK+ + + + +R
Sbjct: 395 QYVGNIDKISTAAQAQ---PGRRQQTVFVIPMDKRIPKIRIRTRQAQELFGQR------- 444
Query: 202 IEMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPES 257
+ +D W+ +S +P H + G +G E E A+L E + F
Sbjct: 445 -----ILVTVDAWDRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPQIV 495
Query: 258 LSCLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRV 311
L CLP W+VPQ RKDLR + +IDP D+DDAL L +G V
Sbjct: 496 LDCLPPEGHNWKVPQNMDDPGWHDRKDLRELLVCSIDPPGCQDIDDALHARPLPNGNIEV 555
Query: 312 GVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSI 371
GVHIADVS+FV P T +D EA +R T+VY++ ++I MLP+LL ++ SL P V R AFS
Sbjct: 556 GVHIADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVQRYAFST 615
Query: 372 FWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEW 431
W++ + +VV ++VI S SYE AQ ID D+ ++ L E
Sbjct: 616 IWEMTPSAEVVSSSCTKSVIFSREAFSYEQAQLRID---DISKTDELTE----------- 661
Query: 432 SDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFL 489
S+++L ++SK+LK KR GAL L + + D E P V + + N L
Sbjct: 662 -----SMRTLSKLSKLLKQKRMDAGALNLASPEVRIETDSELSDPVADVKTKALLETNSL 716
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQF 548
EEFMLLAN T A I +AFP +A+LRRH P E A S K + LD SSS
Sbjct: 717 VEEFMLLANITVASKIFKAFPKTAMLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLAL 776
Query: 549 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 607
SL++ + F+ LI ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 777 ATSLDRCVDPANP---FFNTLIRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHF 832
Query: 608 TSPLRRYPDLVVHRTLNAALEAE 630
TSP+RRY DLVVHR L AA+ E
Sbjct: 833 TSPIRRYADLVVHRQLAAAIGYE 855
>gi|350638276|gb|EHA26632.1| hypothetical protein ASPNIDRAFT_172838 [Aspergillus niger ATCC
1015]
Length = 1033
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 279/563 (49%), Gaps = 69/563 (12%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 142
+D TE V S ++ + R + SS +PT +VV +++R+ R+ VG ++
Sbjct: 347 TDDTEAVVSERERKALQEEVRKAHGKSSEGKPQPTAKVVGVMKRNWRQ--YVGHVDA--- 401
Query: 143 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
G + A R ++ + + P + PK+ V + D + +R+
Sbjct: 402 ----GSAGAQASSGRR------QQTVFVLPMDKRVPKIRVRTRQAGDLMGQRI------- 444
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 258
LV ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ---LVT--IDAWDRDSRYPTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPKAVL 495
Query: 259 SCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
CLP W VP + R+DLR+ I +IDP D+DDAL L +G VG
Sbjct: 496 DCLPAEGHDWRVPASKDNIGWKGRRDLRDLLICSIDPPGCQDIDDALHARPLPNGNFEVG 555
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVS+FV P A+D+EA +R T+VY++ ++I MLP LL ++ SL P V+R AFS+
Sbjct: 556 VHIADVSHFVKPNNAMDLEASLRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVL 615
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W++ +VV ++VIRS SYE AQ ID D + L E
Sbjct: 616 WEMTPNAEVVSADFTKSVIRSREAFSYEKAQKRID---DPTQKDELTE------------ 660
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFL 489
S+++L SKIL+ KR GAL L + + DE G P V + + N L
Sbjct: 661 ----SMRTLLRFSKILRQKRMDAGALNLASPEVRIETDNDEVGDPLTDVKTKAMLETNSL 716
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQF 548
EEFML AN T A I F +A+LRRH P + E K ++LD SSS
Sbjct: 717 VEEFMLHANITVASKIYSTFSQTAMLRRHATPPPQNFEELINQLTKKRDMRLDVSSSRAL 776
Query: 549 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 607
SL++ + + F+ L+ ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 777 ADSLDRC---VDEKNPFFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHF 832
Query: 608 TSPLRRYPDLVVHRTLNAALEAE 630
TSP+RRY DL+VHR L +A+ E
Sbjct: 833 TSPIRRYADLLVHRQLASAIGYE 855
>gi|336267066|ref|XP_003348299.1| hypothetical protein SMAC_02796 [Sordaria macrospora k-hell]
gi|380091953|emb|CCC10219.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 984
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 186/527 (35%), Positives = 259/527 (49%), Gaps = 60/527 (11%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PT +VV II+R+ R+ VG ++ + + G ++D+ + + P
Sbjct: 376 PTAKVVGIIKRNWRQ--YVGHIDQSSVSSSGQGRKQDS--------------VFVIPMDK 419
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
K PK+ + + + + + KR + ID W+ S P H + G
Sbjct: 420 KIPKIRLRTRQVAELLGKR------------ILVTIDAWDRTSRHPTGHFVRSLGELETK 467
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDP 289
+ A+L E + F L CLP W+VP R+DLR+ I +IDP
Sbjct: 468 AAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWKVPASMDDPGWRDRQDLRDLLICSIDP 527
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++ ++I ML
Sbjct: 528 IGCQDIDDALHARALPNGNFEVGVHIADVSHFVKPNNAMDTEASIRGTTVYLVDKRIDML 587
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P+LL ++ SL P V+R AFS+ W++NS D+V ++VI+S SYE AQ ID
Sbjct: 588 PMLLGTDLCSLKPYVERYAFSVIWEMNSNADIVGSRFTKSVIKSREAFSYEQAQLRID-- 645
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 468
D + L SI++L E+SK LK KR GAL L + + V +
Sbjct: 646 -DASQQDEL----------------TNSIRTLLELSKKLKQKRLDAGALSLSSPEIKVHM 688
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 528
E P D L EEFMLLAN + A I AFP +A+LRRH AP E
Sbjct: 689 ESETSDPIDVKTKEHLPTMSLVEEFMLLANTSVAAKIYEAFPQTAILRRHAAPPKTNFDE 748
Query: 529 F-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 586
K GL L SS SL+ + + F+ LI ATR M A YFCSG
Sbjct: 749 LANQLRVKKGLDLSVESSRALADSLDLCVDPKEP---FFNTLIRIMATRCMMSAEYFCSG 805
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
+ ++ HY LA +YTHFTSP+RRY DL+ HR L AA+E E ++
Sbjct: 806 T-QSYPEFRHYGLASEIYTHFTSPIRRYADLMAHRQLAAAIEYEAVH 851
>gi|340720631|ref|XP_003398737.1| PREDICTED: exosome complex exonuclease RRP44-like [Bombus
terrestris]
Length = 981
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 190/592 (32%), Positives = 285/592 (48%), Gaps = 83/592 (14%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
K PTG+VV II R+ R+ + + Q N +G R P
Sbjct: 333 KTPTGKVVGIIRRNWRQ-----YCGILQPSNIEGNVRH-----------------LFVPA 370
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
K PK+ + + K+R+ +VA ID W S +P H + G G
Sbjct: 371 ERKIPKIRIETRQYTVLCKQRI----------IVA--IDSWPRNSRYPLGHFVRALGEIG 418
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ IL E+ I S FS LS LP + W V +L R+DLR + ++DP T
Sbjct: 419 NKITENEVILLEHDIPHSRFSDAVLSSLPEISWSVTDVDLAQREDLRYLDVCSVDPPGCT 478
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL L +G VGVHIADV++FV PGTALD EA RST+VY++ +I M+P LL
Sbjct: 479 DIDDALHCRDLPNGNLEVGVHIADVTHFVRPGTALDKEAASRSTTVYLVDTRIHMIPELL 538
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S SL ++L FS W+++ ++++ ++VI S ++Y+ AQ ID DV
Sbjct: 539 STNFCSLREKEEKLTFSCIWEMDRDANIINTRYCKSVICSRAAMTYDEAQLKID---DVT 595
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
++L V+S+++L ++K LK +R +GAL L + + F D E
Sbjct: 596 QQDSL----------------VKSLRNLNNLAKTLKKRRLDNGALLLASPEVRFEVDCET 639
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P + + + N + EEFMLLAN + A+ I FP+ A+LRRHP P
Sbjct: 640 HDPIEVEVKKLRETNSMVEEFMLLANISVAKKILEEFPECAVLRRHPEPPPTNFEPLIKA 699
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 591
G ++ S + SL + K+ F+ ++ ATR M A YF SG
Sbjct: 700 AKNQGFTINVDSGKELADSLNKCH---KESNPYFNTMLRILATRCMMQAVYFASG-MHQP 755
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY---------------WKH 636
+++ HY LA PVYTHFTSP+RRY D++VHR L A + A+ Y +
Sbjct: 756 SEYYHYGLACPVYTHFTSPIRRYADVIVHRLLAACIGADATYPDLLDKKKIHALCQNMNY 815
Query: 637 RRMLPKNNHREGVRGRFLTGIFYDKDAAESLEG------REALSVAALKYGV 682
R + + ++R V T +F+ ++ + EG + AL + +KYG+
Sbjct: 816 RHRMAQYSNRASV--ALNTHLFF-REKIQDEEGYILFVRKNALQILIIKYGL 864
>gi|219127886|ref|XP_002184157.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404388|gb|EEC44335.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 908
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 181/533 (33%), Positives = 269/533 (50%), Gaps = 54/533 (10%)
Query: 98 MNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNR 157
MN + A+ + RPTG+VV II R+ F+ GS A KN
Sbjct: 342 MNNVADTFALEDDAESLRPTGKVVGIIRRN---------------FSTYSGSIY-AIKNY 385
Query: 158 SSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEE 217
+RE+ + T +P + K +P I R + D +V A +D W
Sbjct: 386 ------EREHPDGSITCVFFP----VDKKIP-PILIRTTQRDRLFGQRIVVA-MDSWPST 433
Query: 218 SPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRK 277
S +P H + V G G + + +L E+ I F L+CLP + + + R+
Sbjct: 434 SIYPLGHYVRVIGPAGSKDVETEVLLQEHDIPHEPFPAAVLACLPPEDYRIDVDNSPGRQ 493
Query: 278 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 337
D+R+ + +IDP D+DDAL L +G +VGVHIADV+++V GTA+D+EA RST
Sbjct: 494 DIRHIPVLSIDPPNCKDIDDALHCTVLPNGNFQVGVHIADVTHYVQAGTAIDLEAANRST 553
Query: 338 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKL 397
S Y++ +++ MLP LL+ ++ SL VDR AFS+ W++ ++++ +T+I S L
Sbjct: 554 STYLVNKRLDMLPSLLTTDLCSLKGNVDRYAFSVLWEVTPEAEILNVEFQKTIIHSIAAL 613
Query: 398 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 457
+Y+ AQ +ID D + ++K L +++ + +R GA
Sbjct: 614 TYQQAQTMIDQPDDPNDIQS------------------NAVKRLASLARKFRKRRIDAGA 655
Query: 458 LRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 516
L L + + F+ D E P D + N + EEFMLLAN T ++ I R FP ++LR
Sbjct: 656 LTLASPEVKFVLDSESLNPTDVQAYALLEANAVVEEFMLLANVTVSKKILRHFPTLSVLR 715
Query: 517 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV--LFDILINYAT 574
RHPAPN + L ++ S + SL+ A + D YV L IL +T
Sbjct: 716 RHPAPNRAMFDSLISKAKSKDLDINIDDSKRLADSLDAAVVE-SDPYVNKLLRIL---ST 771
Query: 575 RPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
R M A YFCSG+F+ +W HY LA PVYTHFTSP+RRY D+ VHR L AA+
Sbjct: 772 RCMSPAQYFCSGEFR-PMEWHHYGLAAPVYTHFTSPIRRYADVCVHRLLAAAV 823
>gi|328849010|gb|EGF98200.1| hypothetical protein MELLADRAFT_54248 [Melampsora larici-populina
98AG31]
Length = 992
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 191/539 (35%), Positives = 272/539 (50%), Gaps = 67/539 (12%)
Query: 109 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 168
SS +++PTG+VV I++R N + + S +SSLS +
Sbjct: 363 SSTHSRQPTGKVVGILKR-----------NWRPYVCHLDPSSIPPSALQSSLSA---YAV 408
Query: 169 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
TP PK+ + + AT+ + V ID W+ S +P+ H +
Sbjct: 409 FATPLSRLIPKIRIRTRQA------------ATLANQKVLISIDSWDVNSRYPEGHFVRA 456
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLS-----RKDLRN 281
G E + ++L E + FS L CLP W VP++ S R+D RN
Sbjct: 457 LGVVESKEAEQESLLLEFDVPYRPFSQAILDCLPESGDKWVVPEKTSSSKLWKDREDFRN 516
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL ++LS+G VGVHIADVS+FVLP T +D EA R T+VY+
Sbjct: 517 LMICSIDPPGCQDIDDALHAKKLSNGNIEVGVHIADVSHFVLPDTPMDFEAASRGTTVYL 576
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYE 400
+ ++I MLP LL + SL P V+RLAFS+ W+L+ + V+ R+VI+S +YE
Sbjct: 577 VDKRIDMLPSLLGTNLCSLKPYVERLAFSVIWELSPETSEFVNVRFTRSVIQSKAAFTYE 636
Query: 401 HAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD-VVRSIKSLYEVSKILKDKRFTDGALR 459
AQ+ D K E SD + SI+ L +++ LK R GAL
Sbjct: 637 EAQNRKDNK--------------------ELSDEITESIRLLNDLAIKLKAARMRAGALN 676
Query: 460 LENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 517
L + + + E P D + N L EEFMLLAN + A+ I +FP +A+LRR
Sbjct: 677 LASPEVKIQMESSESSDPVDVEQKEARETNSLVEEFMLLANISVAKRIYESFPLTAVLRR 736
Query: 518 H---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YA 573
H P N L+ + + G+ LD+SSSG SL+ + ++ F+ L+ A
Sbjct: 737 HNPPPKTNFEVLQ--DVLMKRRGMVLDSSSSGALANSLDNC---IDPEWPTFNTLVRIMA 791
Query: 574 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
TR M A YF SG DT +GHY LA P+YTHFTSP+RRY D++VHR L+AA+ L
Sbjct: 792 TRCMLPAEYFASGSVSKDT-YGHYGLASPIYTHFTSPIRRYADVLVHRQLSAAITQSPL 849
>gi|317026214|ref|XP_001389177.2| exosome complex exonuclease DIS3 [Aspergillus niger CBS 513.88]
Length = 1033
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 279/563 (49%), Gaps = 69/563 (12%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 142
+D TE V S ++ + R + SS +PT +VV +++R+ R+ VG ++
Sbjct: 347 TDDTEAVVSERERKALQEEVRKAHGKSSEGKPQPTAKVVGVMKRNWRQ--YVGHVDA--- 401
Query: 143 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
G + A R ++ + + P + PK+ V + D + +R+
Sbjct: 402 ----GSAGAQASSGRR------QQTVFVLPMDKRVPKIRVRTRQAGDLMGQRI------- 444
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 258
LV ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ---LVT--IDAWDRDSRYPTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPKAVL 495
Query: 259 SCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
CLP W VP + R+DLR+ I +IDP D+DDAL L +G VG
Sbjct: 496 DCLPAEGHDWRVPASKDNIGWKGRRDLRDLLICSIDPPGCQDIDDALHARPLPNGNFEVG 555
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVS+FV P A+D+EA +R T+VY++ ++I MLP LL ++ SL P V+R AFS+
Sbjct: 556 VHIADVSHFVKPNNAMDLEASLRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVL 615
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W++ +VV ++VIRS SYE AQ ID D + L E
Sbjct: 616 WEMTPDAEVVSADFTKSVIRSREAFSYEKAQKRID---DPTQKDELTE------------ 660
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFL 489
S+++L SKIL+ KR GAL L + + DE G P V + + N L
Sbjct: 661 ----SMRTLLRFSKILRQKRMDAGALNLASPEVRIETDNDEVGDPLTDVKTKAMLETNSL 716
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQF 548
EEFML AN T A I F +A+LRRH P + E K ++LD SSS
Sbjct: 717 VEEFMLHANITVASKIYSTFSQTAMLRRHATPPPQNFEELINQLTKKRDMRLDVSSSRAL 776
Query: 549 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 607
SL++ + + F+ L+ ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 777 ADSLDRC---VDEKNPFFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHF 832
Query: 608 TSPLRRYPDLVVHRTLNAALEAE 630
TSP+RRY DL+VHR L +A+ E
Sbjct: 833 TSPIRRYADLLVHRQLASAIGYE 855
>gi|336464517|gb|EGO52757.1| mitotic control protein dis3 [Neurospora tetrasperma FGSC 2508]
Length = 984
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 186/527 (35%), Positives = 258/527 (48%), Gaps = 59/527 (11%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PT +VV +I+R+ R+ VG ++ + + RK ++ + + P
Sbjct: 375 PTAKVVGVIKRNWRQ--YVGHIDQSSVSSSAAQGRK-------------QDSVFVIPMDK 419
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
K PK+ + + + + + KR + ID W+ S P H + G
Sbjct: 420 KIPKIRLRTRQVAELLGKR------------ILVTIDAWDRTSRHPTGHFVRSLGELETK 467
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDP 289
+ A+L E + F L CLP W+VP R+DLR+ I +IDP
Sbjct: 468 AAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWKVPTSMDDPGWRDRQDLRDLLICSIDP 527
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++ ++I ML
Sbjct: 528 IGCQDIDDALHARALPNGNFEVGVHIADVSHFVKPNNAMDTEASIRGTTVYLVDKRIDML 587
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P+LL ++ SL P V+R AFS+ W++NS D+V ++VI+S SYE AQ ID
Sbjct: 588 PMLLGTDLCSLKPYVERYAFSVIWEMNSNADIVGSRFTKSVIKSREAFSYEQAQLRID-- 645
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 468
D + L SI++L E+SK LK KR GAL L + + V +
Sbjct: 646 -DASQQDEL----------------TNSIRTLLELSKKLKQKRLDAGALSLSSPEIKVHM 688
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 528
E P D L EEFMLLAN + A I AFP +A+LRRH AP E
Sbjct: 689 ESETSDPIDVKTKEHLPTMSLVEEFMLLANTSVAAKIYEAFPQTAILRRHAAPPKTNFDE 748
Query: 529 F-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 586
K GL L SS SL+ + + F+ LI ATR M A YFCSG
Sbjct: 749 LANQLRVKKGLDLSVESSRALADSLDLCVDPKEP---FFNTLIRIMATRCMMSAEYFCSG 805
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
+ ++ HY LA +YTHFTSP+RRY DLV HR L AA+E E ++
Sbjct: 806 T-QSYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIEYEAVH 851
>gi|400598795|gb|EJP66502.1| RNB domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 989
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 191/538 (35%), Positives = 263/538 (48%), Gaps = 71/538 (13%)
Query: 110 SYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKG-----GSRKDAKKNRSSLSVPD 164
S+P +PT +VV +I+R+ W Y G + K + R SV
Sbjct: 377 SHP--QPTAKVVGVIKRN--------------WRQYVGHIDPLSASKGPSQGRKLDSV-- 418
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
L P K PK+ + + + + + KRL LV ID W+ +S P H
Sbjct: 419 ----FLIPMDKKIPKIRLRTRQVSELLGKRL----------LVT--IDAWDRDSRHPVGH 462
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKD 278
+ G + A+L E + F L CLP W VP R+D
Sbjct: 463 FVRSLGELETKAAETEALLLEWDVQYRPFPKTVLDCLPKEGHDWRVPTSTDDPGWRDRED 522
Query: 279 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 338
LR I +IDP D+DDAL +L +G VGVHIADVS+FV P A+D EA VR T+
Sbjct: 523 LRGLLICSIDPVGCQDIDDALHARKLPNGNYEVGVHIADVSHFVKPANAMDAEASVRGTT 582
Query: 339 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 398
VY++ ++I MLP LL ++ SL P V+R AFS+ W+LN D+V+ ++VI+S S
Sbjct: 583 VYLVDKRIDMLPPLLGTDLCSLKPYVERYAFSVLWELNDNADIVNVRFTKSVIKSREAFS 642
Query: 399 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 458
YE AQ ID D + L +G +++L +S+ LK KR GAL
Sbjct: 643 YEQAQLRID---DASQQDELTQG----------------MRTLLALSRRLKKKRMDAGAL 683
Query: 459 RLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 517
L + + V + E P D D N L EEFML AN + A I AFP +A+LRR
Sbjct: 684 SLSSPEVKVQMESETSDPIDVKTKELLDTNSLVEEFMLFANISVAAKIYEAFPQTAILRR 743
Query: 518 HPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATR 575
H AP E E K GL+L T +S SL+ + + F+ L+ ATR
Sbjct: 744 HAAPPKTNFDELAEQLRVKRGLELRTDTSKALADSLDTCTDPAEP---FFNTLVRIMATR 800
Query: 576 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
M A YFCSG + ++ HY LA +YTHFTSP+RRY DL+ HR L AA++ E ++
Sbjct: 801 CMMSAEYFCSGT-QSYPEFRHYGLASEIYTHFTSPIRRYADLLAHRQLAAAIDYEAVH 857
>gi|85111130|ref|XP_963787.1| mitotic control protein dis3 [Neurospora crassa OR74A]
gi|28925520|gb|EAA34551.1| mitotic control protein dis3 [Neurospora crassa OR74A]
Length = 1013
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 184/527 (34%), Positives = 258/527 (48%), Gaps = 59/527 (11%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PT +VV +I+R+ R+ VG ++ + + RK ++ + + P
Sbjct: 404 PTAKVVGVIKRNWRQ--YVGHIDQSSVSSSAAQGRK-------------QDSVFVIPMDK 448
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
K PK+ + + + + + KR + ID W+ S P H + G
Sbjct: 449 KIPKIRLRTRQVAELLGKR------------ILVTIDAWDRTSRHPTGHFVRSLGELETK 496
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDP 289
+ A+L E + F L CLP W+VP R+DLR+ I +IDP
Sbjct: 497 AAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWKVPASMDDPGWRDRQDLRDLLICSIDP 556
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++ ++I ML
Sbjct: 557 IGCQDIDDALHARALPNGNFEVGVHIADVSHFVKPNNAMDTEASIRGTTVYLVDKRIDML 616
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P+LL ++ SL P V+R AFS+ W++NS D+V ++VI+S SYE AQ ID
Sbjct: 617 PMLLGTDLCSLKPYVERYAFSVIWEMNSNADIVGSRFTKSVIKSREAFSYEQAQLRID-- 674
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 468
+ ++ SI++L E+SK LK KR GAL L + + V +
Sbjct: 675 -----------------DASQQDELTNSIRTLLELSKKLKQKRLDAGALSLSSPEIKVHM 717
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 528
E P D L EEFMLLAN + A I AFP +A+LRRH AP E
Sbjct: 718 ESETSDPIDVKTKEHLPTMSLVEEFMLLANTSVAAKIYEAFPQTAILRRHAAPPKTNFDE 777
Query: 529 F-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 586
K GL L SS SL+ + + F+ LI ATR M A YFCSG
Sbjct: 778 LANQLRVKKGLDLSVESSRALADSLDLCVDPKEP---FFNTLIRIMATRCMMSAEYFCSG 834
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
+ ++ HY LA +YTHFTSP+RRY DLV HR L AA+E E ++
Sbjct: 835 T-QSYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIEYEAVH 880
>gi|242768929|ref|XP_002341666.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Talaromyces stipitatus ATCC 10500]
gi|218724862|gb|EED24279.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Talaromyces stipitatus ATCC 10500]
Length = 1026
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 185/559 (33%), Positives = 277/559 (49%), Gaps = 68/559 (12%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 142
S+ E + S ++ + R + ++ +PT RVV I++R+ R+ VG ++ +
Sbjct: 342 SEEAEVIVSEREKKALQEEVRKAHGQNAEGKAQPTARVVGIVKRNWRQ--YVGHVDPSST 399
Query: 143 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
+ R+ ++ + + P + PK+ + + + + +R
Sbjct: 400 LSQGNSGRR-------------QQSVFVLPMDKRIPKIRIRTRQAAELLGQR-------- 438
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 258
+ +D W+ +S +P H + G +G E E A+L E + F L
Sbjct: 439 ----ILVTVDSWDRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPKVVL 490
Query: 259 SCLPC------VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
CLP VP + R+DLR+ + +IDP D+DDAL L +G VG
Sbjct: 491 DCLPPEGHNWRVPTNMDHPGWHKRRDLRDLLVCSIDPPGCQDIDDALHARLLPNGNYEVG 550
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVS FV P A+D+EA +R T+VY++ ++I MLP+LL ++ SL P V+R AFS
Sbjct: 551 VHIADVSNFVKPNNAMDLEASLRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVERFAFSTI 610
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W++ G+VV ++VIRS SYE AQ ID ++S T
Sbjct: 611 WEITPNGEVVSTDFTKSVIRSREAFSYEQAQLRID-----DASQT--------------D 651
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLS-GREDLNFLF 490
++ +S+++L SKIL+ KR GAL L + + + E P V + N L
Sbjct: 652 ELTQSMRTLLHFSKILRQKRMDAGALNLASPEIRIETESELNDPLTDVKTKAHLATNSLV 711
Query: 491 EEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA-FCSKHGLQLDTSSSGQFH 549
EEFMLLAN T A I AFP +ALLRRH +P + + K GL LD SSSG
Sbjct: 712 EEFMLLANITVASKIYSAFPQTALLRRHASPPPQNFEQLATQLQKKRGLNLDVSSSGALA 771
Query: 550 QSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 608
SL++ + F+ L+ ATR M A YF +G + ++ HY LA P+YTHFT
Sbjct: 772 ASLDKC---VDPKNPFFNTLVRILATRCMTSAEYFTAGAHA-EVEFRHYGLASPIYTHFT 827
Query: 609 SPLRRYPDLVVHRTLNAAL 627
SP+RRY DL+VHR L AA+
Sbjct: 828 SPIRRYADLIVHRQLAAAI 846
>gi|330935111|ref|XP_003304826.1| hypothetical protein PTT_17530 [Pyrenophora teres f. teres 0-1]
gi|311318374|gb|EFQ87077.1| hypothetical protein PTT_17530 [Pyrenophora teres f. teres 0-1]
Length = 989
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 188/531 (35%), Positives = 261/531 (49%), Gaps = 67/531 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV II+R+ W Y G SS S ++ + L P
Sbjct: 382 QPTARVVGIIKRN--------------WRQYVGHI-DRDSVRSSSKSSRQQQTVFLVPMD 426
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK+ + + + + +R V A ID W+ +S +P H + G
Sbjct: 427 KRIPKIRIRTRQAGELLGQR------------VLATIDSWDRDSRYPVGHFVRSLGELES 474
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCI 284
+G E E A+L E + F L CLP W+VP RKDLR+ +
Sbjct: 475 KGAETE----ALLLEWDVQYKPFPKTVLDCLPAEGHDWKVPASMDDPGWKGRKDLRDLLV 530
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL +L +G +VGVHIADVS+FV P A+D EA R T+VY++ +
Sbjct: 531 CSIDPVGCVDIDDALHAHKLPNGNYQVGVHIADVSHFVKPNNAMDKEASQRGTTVYLVDK 590
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP+LL ++ SL P V+R AFS+ W++ D+V ++VIRS SYE AQ
Sbjct: 591 RIDMLPMLLGTDLCSLKPYVERYAFSVLWEVTEDADIVSSHFTKSVIRSREAFSYEQAQI 650
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
ID + D+ + +++L +SK LK KR GAL L + +
Sbjct: 651 RID-------------------DNSQQDDLTKGMRTLLMLSKKLKQKRMDAGALNLSSPE 691
Query: 465 -PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
V E P D + D N L EEFMLLAN + A AFP +ALLRRH AP
Sbjct: 692 VKVRTESETSDPVDVETKKQLDTNSLVEEFMLLANISVAAKNYEAFPQTALLRRHAAPPK 751
Query: 524 RKLREFE-AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
E + K G++L T SS SL++ + F+ L+ ATR M A
Sbjct: 752 TNFEELDNQLKVKKGMELKTDSSKALADSLDKC---VDAGNPFFNTLVRIMATRCMMSAE 808
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
YFC+G + ++ HY LA +YTHFTSP+RRY DL HR L AA+E E+L
Sbjct: 809 YFCAGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLEAHRQLAAAIEYEQL 858
>gi|115389566|ref|XP_001212288.1| mitotic control protein dis3 [Aspergillus terreus NIH2624]
gi|114194684|gb|EAU36384.1| mitotic control protein dis3 [Aspergillus terreus NIH2624]
Length = 1034
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 275/563 (48%), Gaps = 69/563 (12%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 142
S+ TE V + ++ + + + +S +PT +VV +++R+ W
Sbjct: 348 SEDTETVVTERERKALQEEVKKAHGKNSEGKPQPTAKVVGVVKRN--------------W 393
Query: 143 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
Y G + + + S ++ + + P + PK+ V + D + +R
Sbjct: 394 RQYVGHVDSGSTGAQGT-SGRRQQTVFVLPMDKRVPKIRVRTRQAADLLGQR-------- 444
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 258
+ ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ----ILVTIDAWDRDSRYPTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPKAVL 496
Query: 259 SCLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
CLP W VP + R+DLR+ I +IDP D+DDAL L +G VG
Sbjct: 497 DCLPPEGHDWRVPASKDNVGWKGRRDLRDLLICSIDPPGCQDIDDALHARPLPNGNFEVG 556
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVS+FV P A+D+EA +R T+VY++ ++I MLP LL ++ SL P V+R AFS+
Sbjct: 557 VHIADVSHFVKPNNAMDLEASLRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVL 616
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W++ +VV ++VIRS SYE AQ ID D + L E
Sbjct: 617 WEMTPNAEVVSADFTKSVIRSREAFSYEQAQKRID---DPSQKDELTE------------ 661
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFL 489
S+++L SKIL+ KR GAL L + + DE G P V + + N L
Sbjct: 662 ----SMRTLLRFSKILRQKRMDAGALNLASPEVRIEADNDEVGDPLTDVKTKAMLETNSL 717
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQF 548
EEFML AN T A I F +ALLRRH P + E K ++LD SSSG
Sbjct: 718 VEEFMLHANITVASKIYSTFSQTALLRRHATPPPQNFEELTNQLSKKRNMRLDVSSSGAL 777
Query: 549 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 607
SL++ ++ F+ L+ ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 778 ADSLDRCVDEANP---FFNTLVRILATRCMTSAEYFCAG-AHGESEFRHYGLASPIYTHF 833
Query: 608 TSPLRRYPDLVVHRTLNAALEAE 630
TSP+RRY DL+VHR L +A+ E
Sbjct: 834 TSPIRRYADLLVHRQLASAIGYE 856
>gi|119500108|ref|XP_001266811.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Neosartorya fischeri NRRL 181]
gi|119414976|gb|EAW24914.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Neosartorya fischeri NRRL 181]
Length = 1034
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 192/564 (34%), Positives = 282/564 (50%), Gaps = 70/564 (12%)
Query: 79 HPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLN 138
+P D+ E V+ ++ +++ S +PT +VV +I+R+ R+ VG ++
Sbjct: 345 NPEAEDNEEVVTEKERKALQEEVKKAHGK-HSEGRPQPTAKVVGVIKRNWRQ--YVGHVD 401
Query: 139 VNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEG 198
+G + A R ++ + + P + PK+ V + D + +R+
Sbjct: 402 -------QGSTGASASSGRR------QQNVFVLPMDKRIPKIRVRTRQASDLLGQRI--- 445
Query: 199 DATIEMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFS 254
LV ID W+ +S +P H + G +G E E A+L E + F
Sbjct: 446 -------LVT--IDAWDRDSRYPTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFP 492
Query: 255 PESLSCLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGI 308
L CLP W VP ++ R+DLR+ + +IDP D+DDAL L +G
Sbjct: 493 KAVLDCLPPEGHDWRVPADKEHVGWKGRRDLRDILVCSIDPPGCQDIDDALHARALPNGN 552
Query: 309 SRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 368
VGVHIADVS+FV P A+D+EA VR T+VY++ ++I MLP LL ++ SL P V+R A
Sbjct: 553 FEVGVHIADVSHFVKPNNAMDLEASVRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYA 612
Query: 369 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 428
FS+ W++ +VV ++VIRS SYE AQ ID S N
Sbjct: 613 FSVLWEMTPNAEVVSAEFTKSVIRSREAFSYEQAQMRIDDP----SQN------------ 656
Query: 429 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GRED 485
++ +S+++L +SKIL+ KR GAL L + + DE G P V +
Sbjct: 657 ---DELTQSMRTLLRLSKILRQKRMDAGALNLASPEVRIETDSDEVGDPLTDVKTKAMLA 713
Query: 486 LNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSS 544
N L EEFML AN T A I +F +ALLRRH P + E K L+LD SS
Sbjct: 714 TNSLVEEFMLHANITVAAKIYDSFSQTALLRRHATPPPQNFEELINQLSKKRNLELDVSS 773
Query: 545 SGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPV 603
S SL++ + + F+ L+ ATR M A YFC+G ++++ HY LA P+
Sbjct: 774 SRALADSLDRC---VDPENPFFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPI 829
Query: 604 YTHFTSPLRRYPDLVVHRTLNAAL 627
YTHFTSP+RRY DL+VHR L AA+
Sbjct: 830 YTHFTSPIRRYADLLVHRQLAAAI 853
>gi|440639867|gb|ELR09786.1| exosome complex exonuclease DIS3/RRP44 [Geomyces destructans
20631-21]
Length = 994
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 281/584 (48%), Gaps = 76/584 (13%)
Query: 65 EMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSII 124
++IE E +N + + +D E + + Q+ + + + S+ +PT +VV ++
Sbjct: 335 KIIEEE---ILNKNENADADDGEALVTPQERRALQEEVKKTHSKSTEGRPQPTAKVVGVL 391
Query: 125 ERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLV 184
+R+ R+ VG ++ + + SRK ++ + L P K PK+ V
Sbjct: 392 KRNWRQ--YVGHVDESSVSDSVKQSRK-------------QQTVFLIPMDKKIPKIRVRT 436
Query: 185 KDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQIN 240
+ + + KR + ID W+ ES +P H + G +G E E
Sbjct: 437 RQAGELLGKR------------ILVTIDSWDRESRYPVGHFVRSLGELETKGAETE---- 480
Query: 241 AILYENAICCSGFSPESLSCLP------CVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 294
A+L E I F L CLP VP R+DLR I +IDP D
Sbjct: 481 ALLLEYDIQYRPFPKTVLDCLPKEGSDWIVPSSTEDPGWKGRQDLRGLLICSIDPVGCQD 540
Query: 295 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 354
+DDAL L +G VGVHIADVS FV P A+D EA +R T+VY++ ++I MLP+LL
Sbjct: 541 IDDALHARPLPNGNYEVGVHIADVSNFVKPNNAMDKEASIRGTTVYLVDKRIDMLPMLLG 600
Query: 355 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 414
+ SL P V+R AFS W++ D+V ++VI+S SYE AQ ID
Sbjct: 601 TNLCSLMPYVERYAFSAVWEITPDADIVKSSFTKSVIKSREAFSYEQAQIRID------- 653
Query: 415 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYG 473
+ D+ + +++L +SK LK KR GAL L + + V + E
Sbjct: 654 ------------DASQQDDLTKGMRTLLMLSKKLKQKRMDAGALSLSSPEVKVQMESETS 701
Query: 474 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAF 532
P D + D N L EEFMLLAN + A I A+P +ALLRRH AP E
Sbjct: 702 DPIDVQTKQQLDTNSLVEEFMLLANISVATKIHEAYPQTALLRRHAAPPKSNFEELANQL 761
Query: 533 CSKHGLQLDTSSSGQFHQSLE---QAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDF 588
K GL+L SS SL+ +EK F+ L+ ATR M A Y+ +G+F
Sbjct: 762 KVKRGLELKHESSRALADSLDLCVDPKEK------FFNTLVRIMATRCMMSAEYYVAGNF 815
Query: 589 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
++ HY LA +YTHFTSP+RRY DLV HR L AA++ E+L
Sbjct: 816 A-YPEFRHYGLASEIYTHFTSPIRRYADLVAHRMLAAAIDYEQL 858
>gi|350296608|gb|EGZ77585.1| mitotic control protein dis3 [Neurospora tetrasperma FGSC 2509]
Length = 1009
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 186/527 (35%), Positives = 258/527 (48%), Gaps = 59/527 (11%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PT +VV +I+R+ R+ VG ++ + + RK ++ + + P
Sbjct: 400 PTAKVVGVIKRNWRQ--YVGHIDQSSVSSSAAQGRK-------------QDSVFVIPMDK 444
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
K PK+ + + + + + KR + ID W+ S P H + G
Sbjct: 445 KIPKIRLRTRQVAELLGKR------------ILVTIDAWDRTSRHPTGHFVRSLGELETK 492
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDP 289
+ A+L E + F L CLP W+VP R+DLR+ I +IDP
Sbjct: 493 AAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWKVPASMDDPGWRDRQDLRDLLICSIDP 552
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++ ++I ML
Sbjct: 553 IGCQDIDDALHARALPNGNFEVGVHIADVSHFVKPNNAMDTEASIRGTTVYLVDKRIDML 612
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P+LL ++ SL P V+R AFS+ W++NS D+V ++VI+S SYE AQ ID
Sbjct: 613 PMLLGTDLCSLKPYVERYAFSVIWEMNSNADIVGSRFTKSVIKSREAFSYEQAQLRID-- 670
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 468
D + L SI++L E+SK LK KR GAL L + + V +
Sbjct: 671 -DASQQDEL----------------TNSIRTLLELSKKLKQKRLDAGALSLSSPEIKVHM 713
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 528
E P D L EEFMLLAN + A I AFP +A+LRRH AP E
Sbjct: 714 ESETSDPIDVKTKEHLPTMSLVEEFMLLANTSVAAKIYEAFPQTAILRRHAAPPKTNFDE 773
Query: 529 F-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 586
K GL L SS SL+ + + F+ LI ATR M A YFCSG
Sbjct: 774 LANQLRVKKGLDLSVESSRALADSLDLCVDPKEP---FFNTLIRIMATRCMMSAEYFCSG 830
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
+ ++ HY LA +YTHFTSP+RRY DLV HR L AA+E E ++
Sbjct: 831 T-QSYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIEYEAVH 876
>gi|121708269|ref|XP_001272079.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Aspergillus clavatus NRRL 1]
gi|119400227|gb|EAW10653.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Aspergillus clavatus NRRL 1]
Length = 1032
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 191/563 (33%), Positives = 281/563 (49%), Gaps = 69/563 (12%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 142
++ E V + ++ + + + SS +PT +VV +I+R+ W
Sbjct: 348 AEENEAVVTERERKALQEEVKKAHGKSSEGRPQPTAKVVGVIKRN--------------W 393
Query: 143 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
Y G + +++S S ++ + + P + PK+ V + D + +R
Sbjct: 394 RQYVGHVDSGSTGSQAS-SGRRQQNVFVLPMDKRIPKIRVRTRQAGDLLGQR-------- 444
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 258
+ ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ----ILVTIDAWDRDSRYPTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPKAVL 496
Query: 259 SCLPCV--PWEVP--QEEL--LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
CLP W+VP +E++ R+DLR+ I +IDP D+DDAL L +G VG
Sbjct: 497 DCLPSEGHDWKVPASKEDIGWNGRRDLRDLLICSIDPPGCQDIDDALHARPLPNGNFEVG 556
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVS+FV P A+D+EA VR T+VY++ ++I MLP LL ++ SL P V+R AFS+
Sbjct: 557 VHIADVSHFVKPNNAMDLEASVRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVL 616
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W++ +VV ++VIRS SYE AQ ID D ++ L E
Sbjct: 617 WEMTPNAEVVSANFTKSVIRSREAFSYEQAQKRID---DPSKNDELTE------------ 661
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFL 489
S+++L +SKIL+ KR GAL L + + DE G P V + N L
Sbjct: 662 ----SMRTLLRLSKILRQKRMDAGALNLASPEVRIETDNDEVGDPLTDVKTKALLATNSL 717
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQF 548
EEFML AN T A I +F +ALLRRH P + E K L+LD SSS
Sbjct: 718 VEEFMLHANITVAAKIYDSFSQTALLRRHATPPPQNFEELINQLSKKRNLELDVSSSRAL 777
Query: 549 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 607
SL++ + + F+ L+ ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 778 ADSLDRC---VDAENPFFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHF 833
Query: 608 TSPLRRYPDLVVHRTLNAALEAE 630
TSP+RRY DL+VHR L +A+ E
Sbjct: 834 TSPIRRYADLLVHRQLASAIGYE 856
>gi|294659569|ref|XP_461958.2| DEHA2G09482p [Debaryomyces hansenii CBS767]
gi|199434064|emb|CAG90426.2| DEHA2G09482p [Debaryomyces hansenii CBS767]
Length = 1012
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 176/492 (35%), Positives = 253/492 (51%), Gaps = 43/492 (8%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
V+L+ + I+ R + + +V A +D W S +PQ H + G E +
Sbjct: 440 FVILMDKVLPKIRIRTRKSKELLGQRIVIA-VDSWPSTSKYPQGHFVRSLGEIESAEAET 498
Query: 240 NAILYENAICCSGFSPESLSCLP--CVPWEVPQ------EELLSRKDLRNFCIFTIDPST 291
A+L E+ + FS L CLP W VPQ E+L RKDLR+ + +IDP
Sbjct: 499 EALLLEHDVEYRPFSKNVLDCLPEEGTNWTVPQNLDNGDEQLAKRKDLRDKLVCSIDPPG 558
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
D+DDAL ++L +G VGVHIADV++FV P TALD E R TSVY++ ++I MLP+
Sbjct: 559 CVDIDDALHAQKLPNGNYEVGVHIADVTHFVRPNTALDNEGAARGTSVYLVDKRIDMLPM 618
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
LL + SL P V+R AFS+ W+L+ ++V+ +++I+S SYE AQ ID K
Sbjct: 619 LLGTNLCSLRPFVERYAFSVIWELDEDANIVNVNYMKSIIKSREAFSYEQAQLRIDDKSQ 678
Query: 412 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFD 470
+ ++ +S++ L +SK LK KR GAL L + + V +
Sbjct: 679 TD-------------------ELTKSMRILLNLSKKLKQKRLDAGALNLASPEVKVHMDS 719
Query: 471 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRKLR 527
E P + + + N L EEFML AN + A I A+P +A+LRRH PA N L
Sbjct: 720 ETSDPGEVEIKKLLETNSLVEEFMLFANISVARKIFDAYPQTAMLRRHAPPPATNFETLN 779
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 586
E K G+ + SS SL++ + KD Y F+ L+ +TR M A YF S
Sbjct: 780 EMLRI-RKTGMSVSLESSKSLADSLDRCNDP-KDPY--FNTLLRILSTRCMMAAEYFPSS 835
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR-----RMLP 641
+ ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR ++
Sbjct: 836 SY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHRDKNKMELIV 894
Query: 642 KNNHREGVRGRF 653
KN +R +F
Sbjct: 895 KNINRRHRNAQF 906
>gi|393219308|gb|EJD04795.1| RNB-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 1024
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 189/552 (34%), Positives = 275/552 (49%), Gaps = 71/552 (12%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
K+PTGR+V II+R+ R V ++ + DA + S SV + Q P
Sbjct: 400 KQPTGRIVGIIKRNWR--AFVCHID-------RASLASDASTSLSLQSV----FAQ--PV 444
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
P++ + + P + +++ LV+ ID W+ S +P+ H + G
Sbjct: 445 SRALPRIRMRTRQAPSLLGQKI----------LVS--IDRWDVNSRYPEGHFVRALGAAE 492
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLS-----RKDLRNFCIFT 286
E + ++L E + F L CLP W VP +++ S R+DLRNF I +
Sbjct: 493 SKEAEQESLLLEYEVPYRPFGKAILDCLPKEGDSWVVPPKDISSPEWRDREDLRNFVICS 552
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP D+DDAL +L +G GVHIADVS+FVLP +D EA R T+VY++ ++I
Sbjct: 553 IDPPGCQDIDDALHARQLPNGNIEAGVHIADVSHFVLPDNPMDHEAASRGTTVYLVDKRI 612
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP LL + SL P V+RLAFS+ W++ S ++V+ ++VI S +YE AQ
Sbjct: 613 DMLPSLLGTNLCSLRPFVERLAFSVIWEITSEAEIVNVRFSKSVIASKAAFTYEEAQ--- 669
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
L + P + ++ SI+ L +++ L+ R GAL L + +
Sbjct: 670 -----------LRKDDPH-----QQDELTSSIRLLNSLARKLRAGRMAAGALNLASPEVK 713
Query: 467 FLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAP 521
D E P D + N L EEFMLLAN + A+ I FP +A+LRRH P
Sbjct: 714 IHLDSSESSDPIDVEQKELHETNSLVEEFMLLANISVAKRIQETFPQTAVLRRHLPPPHT 773
Query: 522 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLA 580
N KL++ + + LD SSSG SL++ + + F+ L+ ATR M A
Sbjct: 774 NFEKLQDI--LKKRKNMTLDVSSSGALAASLDKC---IDSNEPAFNTLVRIMATRCMLSA 828
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR--- 637
YFCSG DT + HY LA P+YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 829 EYFCSGSVARDT-FAHYGLASPIYTHFTSPIRRYADVLAHRQLAAAINYAPLHASLHSKS 887
Query: 638 ---RMLPKNNHR 646
R+L NHR
Sbjct: 888 IVERILNVVNHR 899
>gi|350646837|emb|CCD58558.1| unnamed protein product [Schistosoma mansoni]
Length = 633
Score = 262 bits (669), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 158/429 (36%), Positives = 225/429 (52%), Gaps = 86/429 (20%)
Query: 268 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS-------------DGISRVGVH 314
+ +++ + RKD R +C+FTIDPSTA DLDDAL I +L + VGVH
Sbjct: 222 IREKDFIFRKDFRKYCVFTIDPSTARDLDDALHIRQLEPSEIEKLESSGYRNAFYEVGVH 281
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV P + +D EA R+TS+Y++Q +PMLP LL EE SLNPG D+LAFS+ +
Sbjct: 282 IADVSYFVKPNSLVDKEAASRATSIYLVQLCVPMLPRLLCEEQCSLNPGEDKLAFSVVFT 341
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
+ ++ W GRT IRSCCKLSYE AQ +D + + D+
Sbjct: 342 VTEDAKILTTWFGRTFIRSCCKLSYEDAQ--VDEPYTI-------------------MDI 380
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVF-LFDEYGTPYDSVLSGREDLNFLFEEF 493
+++ L +++ ++ RF GALRL+ K F L +E G P + N+L EE+
Sbjct: 381 CQNVLKLNDLATKMRKSRFHSGALRLDQVKSTFSLNNETGLPLGIAPYISKQSNWLIEEW 440
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSL- 552
ML ANK+ AE +A+ PDSA LRRHP+P++++L E + + G+ ++ S+G S+
Sbjct: 441 MLAANKSVAERLAKYLPDSAFLRRHPSPSVKQLTEVSSSLNVAGININIDSAGSIQNSIC 500
Query: 553 -------------EQAREKLKDDY----VLFD---------------------------- 567
A KL DD+ ++ D
Sbjct: 501 REAGCNVEVGYHYSDALVKLCDDFMSGVLIHDSHLIEEMKTMDLNSVVQKDKLPLKTLEH 560
Query: 568 ---ILINYA--TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
+L+ A T+ M LA YFC G + HYAL +YTHFTSP+RRY D++VHR
Sbjct: 561 EARLLVTVALLTKTMNLAVYFCLGLLPSELSPAHYALNMQLYTHFTSPIRRYADVIVHRQ 620
Query: 623 LNAALEAEK 631
L+A L E+
Sbjct: 621 LSAILAKEE 629
>gi|390343121|ref|XP_001200561.2| PREDICTED: DIS3-like exonuclease 1-like [Strongylocentrotus
purpuratus]
Length = 1047
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 272/518 (52%), Gaps = 44/518 (8%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
P GRVV I+ER+ RD + F ++ + G+ + +K I + P
Sbjct: 325 PCGRVVGILERN-WRDYVATFPEKDE---VQTGASRGSK-------------ILVIPWDY 367
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ V + + DA + +V R+D W +S +P H + G G++
Sbjct: 368 RIPKIRVSTR-----------QADALNDQRIVV-RLDNWPADSQYPNGHYVRSLGPIGQL 415
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVP----QEELLSRKDLRN-FCIFTIDPS 290
E ++ A L EN++ FS + +P W+ P EE+ RKDLRN IF+IDP
Sbjct: 416 ETEVAATLIENSLPVGPFSEGQIKEMPVNTWDNPWLMTDEEIGKRKDLRNSHLIFSIDPK 475
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L +G +GVHIADVSYFV G+ D+EA++RST+VY+ R+ MLP
Sbjct: 476 GCEDVDDTLSVRELGNGNIELGVHIADVSYFVKEGSLTDLEARLRSTTVYLADRRYDMLP 535
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR---WIGRTVIRSCCKLSYEHAQDIID 407
+LS ++ SL GVDR A S+ W+L V + W GRT+IRS K+ YE AQ + D
Sbjct: 536 EILSADLCSLIGGVDRYAVSVLWELKPFTFEVIKDKVWYGRTIIRSAYKMFYEAAQMLHD 595
Query: 408 GKFDVESSNTLGE--GWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
GK S++ + E + + E + ++ L +++ LK +R GA++LE ++
Sbjct: 596 GK--TLSADDIPELRDVDDMTKELELQRLKWAVDQLMMIARRLKAQREVGGAVQLEGTEV 653
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
+E + V +++ E M+ AN A+ IA+++P +ALLR HP P +
Sbjct: 654 KVELNEEQEIENLVPKQTMEIHETIAECMIYANHWVAKKIAQSYPQAALLRHHPLPRQEQ 713
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
++ G +DTS++ + +SL+ + + D V IL + AT+ M A YF +
Sbjct: 714 FQDLITSARSKGFHVDTSTNKKLAESLDGCID--RRDPVFNKILRSLATKAMSNALYFST 771
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
G D + HY LA YTHFTSP+RRY D++VHR L
Sbjct: 772 GSLSVD-QFFHYGLAMDRYTHFTSPIRRYADIIVHRLL 808
>gi|320580721|gb|EFW94943.1| exosome complex exonuclease RRP44 [Ogataea parapolymorpha DL-1]
Length = 974
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 187/535 (34%), Positives = 276/535 (51%), Gaps = 65/535 (12%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PT RVV I++RS R VG L N + KD Q+
Sbjct: 365 PTARVVGIVKRSWRL--YVGQLAPN-------SAAKD----------------QVGGNAA 399
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
K ++++ + LP ++ R + +V A +D W+ S +P H + V G +
Sbjct: 400 KSCFVILMDRSLP-KVRIRTRRARELLGKRIVVA-VDSWSPTSKYPDGHFVRVLGDIEDK 457
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE------ELLSRKDLRNFCIFTI 287
+ + A+L E+ + FS L CLP W+VP++ +L R+DLR + +I
Sbjct: 458 DAEQEALLLEHDVEYRPFSKNVLDCLPKEGHDWKVPEKLDNGDPQLAQRRDLREKLVCSI 517
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP D+DDAL +RL +G VGVHIADV++FV PGTALD E R+TSVY++ ++I
Sbjct: 518 DPPGCVDIDDALHAQRLPNGNYEVGVHIADVTHFVKPGTALDQEGASRATSVYLVDKRID 577
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 407
MLP+LL ++ SL P VDR AFS+ W+++ ++V +++IRS +YE AQ +D
Sbjct: 578 MLPMLLGTDLCSLKPYVDRFAFSVLWEMDEDANIVRVDYFKSIIRSKEAFAYEQAQLRMD 637
Query: 408 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PV 466
+ D+ + ++ L ++SK LK KR GAL L + + V
Sbjct: 638 DP-------------------SQQDDLTKGMRILLQLSKKLKQKRLDAGALNLASPEVKV 678
Query: 467 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNM 523
+ E P + + + N L EEFMLLAN + A+ I FP A+LRRH PA N
Sbjct: 679 HMDSETSDPGEVEVKKLVEANSLVEEFMLLANISVAKKIYDEFPQVAMLRRHASPPATNF 738
Query: 524 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASY 582
L + + G+ + SS SL++ E +D Y F+ L+ ATR M A Y
Sbjct: 739 EVLNDM--LRVRKGMSISLESSKALADSLDRC-EDPQDPY--FNTLLRIMATRCMMAAEY 793
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
F +G++ + D+ HY LA +YTHFTSP+RRY D+VVHR L AA+ E L+ HR
Sbjct: 794 FSAGNYGYE-DFRHYGLATEIYTHFTSPIRRYCDVVVHRQLAAAIGYEPLHPLHR 847
>gi|195573451|ref|XP_002104707.1| GD21090 [Drosophila simulans]
gi|194200634|gb|EDX14210.1| GD21090 [Drosophila simulans]
Length = 957
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 270/549 (49%), Gaps = 87/549 (15%)
Query: 90 SSSQQNDGMNAIERLSAMISSYPTKR-PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG 148
S + D + ++++ A S P +R PTGR+V I+ R +W Y G
Sbjct: 323 SEERAKDENDMLKQVRAAAS--PAERTPTGRIVGIVRR--------------KWRQYCGI 366
Query: 149 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVA 208
+ + D P K P++ + + A ++ + +
Sbjct: 367 LQPSL--------IEDTNRHIFVPADRKIPRIRIETRQA------------AKLQNQRII 406
Query: 209 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEV 268
ID W S +P H + G G+ + IL E+ + FS E LS LP +PW +
Sbjct: 407 VTIDTWPRNSRYPHGHFVRSLGPLGDTATENEVILLEHDVPHCKFSDEVLSFLPKMPWTI 466
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
E+ R DLR+ I ++DP TD+DDAL L +G VGVHIADVS+F+ PG AL
Sbjct: 467 TDEDYSKRVDLRDLFICSVDPPGCTDIDDALHCRELPNGNLEVGVHIADVSHFIRPGNAL 526
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D+EA R T+VY++ ++I M+P LLS + SL GV+R AFS W++++ +V+ + +
Sbjct: 527 DMEAAARGTTVYLVGKRIDMVPELLSSNLCSLVGGVERFAFSCVWEVDNEANVLSKRFHK 586
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
+VI+S ++YE AQ IID D N ++ +S++ L ++KIL
Sbjct: 587 SVIKSKRAMTYEEAQSIID---DATQQN----------------EIAKSLRHLNRLAKIL 627
Query: 449 KDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 507
K +R +GAL L + + F D E P + + + N + EEFMLLAN T AE IA
Sbjct: 628 KKRRMDNGALVLASPEIRFQVDSETHEPLEVEVKQMRETNSMVEEFMLLANITVAEHIAT 687
Query: 508 AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 567
F +++ Q+D S + SL++ +K D F+
Sbjct: 688 EFSEAS-------------------------QVDIESGLELSHSLDKC---VKADNPYFN 719
Query: 568 ILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 626
+I TR M A YF SG + + ++ HY LA P+YTHFTSP+RRY D++VHR L A+
Sbjct: 720 TMIRILTTRCMMQAVYFISGSLQKE-EFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAAS 778
Query: 627 LEAEKLYWK 635
+ A+ Y K
Sbjct: 779 IGADSTYAK 787
>gi|387790426|ref|YP_006255491.1| ribonuclease R [Solitalea canadensis DSM 3403]
gi|379653259|gb|AFD06315.1| ribonuclease R [Solitalea canadensis DSM 3403]
Length = 709
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 158/447 (35%), Positives = 237/447 (53%), Gaps = 52/447 (11%)
Query: 187 LPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYEN 246
+P K +++GD + ARI +W + + P ++ V GR GE ++NAIL +
Sbjct: 172 IPQHALKNVKDGDKAV------ARITDWPQGAKNPIGEIVEVLGRPGENNTEMNAILADY 225
Query: 247 AICC---SGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIER 303
+ E+ S L + QEE+ R+D RN FTIDP A D DDA+S +
Sbjct: 226 GFPIKFPAKVEDEANSLLDVIT----QEEIAKRRDFRNITTFTIDPIDAKDFDDAISFRK 281
Query: 304 LSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPG 363
L G +GVHIADVS+++LP T LD EA R TSVY++ R IPMLP LS V SL P
Sbjct: 282 LDTGNYEIGVHIADVSHYILPDTILDKEALERGTSVYLVDRVIPMLPERLSNGVCSLRPN 341
Query: 364 VDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP 423
++L FS ++++ +++ W GRTVI S + +YE AQ++++GK SS
Sbjct: 342 EEKLTFSAVFEIDEQANILSEWFGRTVINSDRRFTYEEAQEVLEGK----SS-------- 389
Query: 424 QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGR 483
E++D + L +++ +L+D+R+ GA+ E ++ F DE G P + R
Sbjct: 390 ------EYAD---ELLMLNKIAYVLRDQRYKTGAINFETTEVKFRLDETGKPIGVYVKER 440
Query: 484 EDLNFLFEEFMLLANKTAAEVIARAFPD----SALLRRHPAPNMRKLREFEAFCSKHGLQ 539
+D + L E+FMLLAN+ AE +A+ P + + R H AP+ L +F F ++ G +
Sbjct: 441 KDAHKLIEDFMLLANRKVAEFVAKMGPKKRSYTFVYRVHDAPDETMLTKFSEFAARFGYK 500
Query: 540 LDTSSSGQFHQSLEQAREKLKDDYV---LFDILINYATRPMQLASYFCSGDFKDDTDWGH 596
++ S H+ + ++ L DD ++L A R M A Y H
Sbjct: 501 INMKS----HKEISKSLNFLMDDVTGKKEQNVLTQLAIRAMAKAIYTTKKS-------SH 549
Query: 597 YALAFPVYTHFTSPLRRYPDLVVHRTL 623
Y LAF YTHFTSP+RRYPD++ HR L
Sbjct: 550 YGLAFDYYTHFTSPIRRYPDVLSHRLL 576
>gi|338210808|ref|YP_004654857.1| ribonuclease R [Runella slithyformis DSM 19594]
gi|336304623|gb|AEI47725.1| ribonuclease R [Runella slithyformis DSM 19594]
Length = 786
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 238/449 (53%), Gaps = 24/449 (5%)
Query: 187 LPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYEN 246
+P++ K ++GD V R+ ++ S + V+ V G+ G E +++AIL E
Sbjct: 197 IPETKLKGAQDGDK------VLIRLTQYATRSRRMEGEVVEVLGKAGSHETEMHAILAEF 250
Query: 247 AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 306
+ F E + +P + EE+ R+D+R+ FTIDP+ A D DDALS+ L +
Sbjct: 251 GLPIR-FPEELEAEANAIPDTISAEEIGRRRDMRDITTFTIDPADAKDFDDALSVRFLDN 309
Query: 307 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 366
G +G+HIADV+++V PGTAL+ EA R+TSVY++ R +PMLP LS + SL P D+
Sbjct: 310 GNYEIGIHIADVTHYVRPGTALEQEAYARATSVYLVDRTVPMLPEKLSNNLCSLRPNEDK 369
Query: 367 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY 426
L FS+ ++ + W GRTVI S + SYE AQ+I++ + + + EG+ L
Sbjct: 370 LTFSVVVEMTPDAKIKHEWFGRTVIHSDKRFSYEEAQEILEMQAATDKA-AKEEGFVDLS 428
Query: 427 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL 486
++ + + L ++ L+ +RF GA+ E + F DE G P R+D
Sbjct: 429 APLPYA---KELTLLNTLALQLRAERFAKGAVNFETVEVKFRLDEAGKPLGIYTKVRKDA 485
Query: 487 NFLFEEFMLLANKTAAEVIAR-----AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD 541
+ L EEFMLLANK E I R A P++ + R H P+M KLR F AF + G +L
Sbjct: 486 HKLIEEFMLLANKRVPEFIQRQSKDKAHPNTMVYRIHEEPDMEKLRVFAAFAGRLGYKLK 545
Query: 542 TSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAF 601
+ QSL E+L+ + L A R M A Y D GH+ LAF
Sbjct: 546 LENEKVAAQSLNHLMEELEGKPEQ-NALEQLAIRTMAKARYSTE-------DVGHFGLAF 597
Query: 602 PVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
Y+HFTSP+RRYPD++ HR L L+ +
Sbjct: 598 RRYSHFTSPIRRYPDMMAHRLLQHYLDGK 626
>gi|311748419|ref|ZP_07722204.1| ribonuclease R [Algoriphagus sp. PR1]
gi|126576931|gb|EAZ81179.1| ribonuclease R [Algoriphagus sp. PR1]
Length = 733
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 282/568 (49%), Gaps = 79/568 (13%)
Query: 72 YNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTK--RPTGRVVSIIERSPR 129
+ +I P S+ V + ++ +++ M++ +K +P GRV+ ++ER+
Sbjct: 101 FAFIIPDDPEKSEGDIMVKEADMKQALDG-DKVRVMVNPLKSKFGKPEGRVLEVVERA-- 157
Query: 130 RDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPD 189
RD VG + ++ F + VPD + + + + V DL
Sbjct: 158 RDEFVGRVEISPRF---------------AFVVPDFKKM--------HKDIFVHRGDL-- 192
Query: 190 SIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC 249
+ E V ++ EW E P V+ V G G E +I++I+ E +
Sbjct: 193 ---------EGAKHNEKVVVKLTEWREGDKNPTGKVIRVLGEAGLHEVEIHSIMAEFGLP 243
Query: 250 CSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 309
+ E + ++ +E+ SRKD R FTIDP+ A D DDA+S + L +G
Sbjct: 244 FE-YPEEPNKEANAISEKITAKEIKSRKDFRGVPTFTIDPADAKDFDDAISYQVLPNGNL 302
Query: 310 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 369
+GVHIADV+++V P TAL+ EA R+TSVY++ R IPMLP LS + SL P D+L F
Sbjct: 303 EIGVHIADVTHYVQPKTALEKEAFNRATSVYLVDRTIPMLPERLSNGLCSLRPNEDKLTF 362
Query: 370 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 429
S ++++ +++ WIGRTVI S + +YE AQ+ ID N G+ + +L
Sbjct: 363 SCVFEMDREANILKHWIGRTVIHSDRRFAYEEAQENID--------NQSGDFFAEL---- 410
Query: 430 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFL 489
L +++K ++ KRF +GA+ E + F D+ GTP ++ R+D++ L
Sbjct: 411 ---------TLLNDLAKKVRKKRFNNGAVNFETVEVKFKLDDKGTPLGLIVKERKDIHKL 461
Query: 490 FEEFMLLANKTAAEVIARAF--PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS--- 544
EEFMLLANK AE I + D+ + R H P+M +L F F + G + D +
Sbjct: 462 IEEFMLLANKFVAEFIYKKNKGKDTFVYRTHDFPDMERLDTFSGFAKRFGHEFDIENEQK 521
Query: 545 -SGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPV 603
SG ++ +++ + K + ++L A R M A Y GH+ LAF
Sbjct: 522 ISGALNKLMDEIQGKPEQ-----NVLEQLAIRSMAKAKYTTEPK-------GHFGLAFAH 569
Query: 604 YTHFTSPLRRYPDLVVHRTLNAALEAEK 631
YTHFTSP+RRYPD++VHR L+ L+ K
Sbjct: 570 YTHFTSPIRRYPDMMVHRLLDHYLQGGK 597
>gi|300120171|emb|CBK19725.2| unnamed protein product [Blastocystis hominis]
Length = 802
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 190/582 (32%), Positives = 278/582 (47%), Gaps = 75/582 (12%)
Query: 60 EAYNQEMIEREGYNYINGHHPST----SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKR 115
E Y + + E +N +P +D EK S ++ G + + S K
Sbjct: 80 ELYPKAQWKAESEYLVNNDNPEEEQKDNDDEEKEKESNKSSG-----KTESTSSRTAEKV 134
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
TGRVV+I R+ W Y G A+ +S Y P +
Sbjct: 135 TTGRVVAIARRN--------------WKQYCGSIEPIAEGTINS-------YYLFDPVNR 173
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ + + A + +V A I++W S +P H + G G+
Sbjct: 174 RIPK-----------IRIKTNQYAALVNQRIVVA-INDWPTTSSYPIGHYMKTLGVIGDR 221
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLR-NFCIFTIDPSTATD 294
E + +L E++I + FS E L CLP W + ++ R DLR CI +IDP D
Sbjct: 222 EVETQVLLLEHSIPPNVFSKEVLDCLPPADWHITEQNARGRLDLRGKVCIVSIDPPGCKD 281
Query: 295 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 354
+DDAL L +G VG+HIADV+Y++ +ALD+EA+ RSTS Y++ R++ MLP LL+
Sbjct: 282 IDDALHARELPNGNVEVGIHIADVTYYMKHNSALDLEARNRSTSTYLVDRRLDMLPKLLT 341
Query: 355 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 414
E + SL DR AFS+ ++ G+VV +T+IRS L+Y+ AQ+ +D + D
Sbjct: 342 ENLCSLVADQDRFAFSVIAEMTKQGEVVQTQFKKTIIRSKAALTYQQAQNYLDSRDD--- 398
Query: 415 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYG 473
S++ RS+ L+++SK LK +R + GAL L + + F D E
Sbjct: 399 ----------------RSEIGRSVHLLFDLSKRLKAQRISAGALTLASPEVRFEMDSETN 442
Query: 474 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 533
P +D N L EEFMLLAN A+ I AFP +A+LRRHP P+M F
Sbjct: 443 DPLSMDSYKLKDTNSLVEEFMLLANTLVAKRITEAFPKTAVLRRHPIPDM--FPRFSLLI 500
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKLKDDY--------VLFDILIN-YATRPMQLASYFC 584
+ + ++S L ++L D LF+ L+ TR M A YF
Sbjct: 501 VESASTISSASRSAPAYFLVSPNKQLADSLDKAVLPAEPLFNKLLRILTTRCMTQAVYFP 560
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 626
+G+ + HY LA +YTHFTSP+RRY D VVHR L AA
Sbjct: 561 AGEVP-PAQFYHYGLAASIYTHFTSPIRRYADDVVHRLLAAA 601
>gi|399030175|ref|ZP_10730681.1| ribonuclease R [Flavobacterium sp. CF136]
gi|398071681|gb|EJL62928.1| ribonuclease R [Flavobacterium sp. CF136]
Length = 726
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 178/521 (34%), Positives = 262/521 (50%), Gaps = 56/521 (10%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
KRP G V+ +IER+ + VG +++ F + ++
Sbjct: 132 KRPEGEVIEVIERN--KTDFVGVIDIQANFAF------------------------VSTA 165
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+PK + + KD E GD +V I++W + + P V+ V G+ G
Sbjct: 166 NPKMYTDIFIPKDKIG----EAENGD------VVLVTIEDWPKRADSPFGSVIRVLGKPG 215
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
E +I+AIL E + F E + + + E+ R+D+R+ FTIDP A
Sbjct: 216 EHNTEIHAILAEYGLPAD-FPVEVEVYAQKIDTSIQESEIAKRRDMRDTLTFTIDPKDAK 274
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D DDALS ++L +G +G+HIADVSY++ GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 275 DFDDALSFKKLENGNYEIGIHIADVSYYLEEGTILDDEAYQRATSVYLVDRVVPMLPEVL 334
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S SL P ++ FS ++++ V+++W GRTVI S + +YE AQ II+ K
Sbjct: 335 SNFACSLRPNEEKYTFSAVFEVSPTSQVINQWFGRTVIYSDQRFAYEEAQYIIETK---- 390
Query: 414 SSNTLGEGWPQLYGQFEWSD-VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
NT+ + SD +V + L E++KIL+ KR +GA+ + + F D
Sbjct: 391 -DNTIPIDISITGESYVVSDEIVDATLKLDELAKILRKKRMANGAISFDKVEVKFNLDAE 449
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
G P +D N L EEFMLLAN+ AE I + + + R H PN KL A
Sbjct: 450 GEPEGVYFKISKDANHLIEEFMLLANRKVAEYIGKQ-KKTFVYRIHDEPNEDKLIAMAAV 508
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKD 590
+K G ++D + G +SL E++ K + L D L A R M A Y S D
Sbjct: 509 IAKFGYKIDFRNKGDISKSLNALMEEVNGKKEQNLIDTL---AIRSMSKAKY--STD--- 560
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
+ GHY LAF Y+HFTSP+RRYPD++VHR L L+ K
Sbjct: 561 --NIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQYYLDGGK 599
>gi|71019237|ref|XP_759849.1| hypothetical protein UM03702.1 [Ustilago maydis 521]
gi|46099647|gb|EAK84880.1| hypothetical protein UM03702.1 [Ustilago maydis 521]
Length = 1012
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 187/538 (34%), Positives = 270/538 (50%), Gaps = 65/538 (12%)
Query: 109 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 168
SS +PTG+VV I+ R+ R V ++VN N S+LS + +
Sbjct: 385 SSRGEPQPTGKVVGIVRRNWR--SYVAHVDVNSV-------------NSSALSSLGAQTV 429
Query: 169 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
TP K P++ + + D + +++ L+A +D W S +P H +
Sbjct: 430 FATPVDRKLPRIRIRTRQAKDLMGQKI----------LIA--LDAWRPTSRYPDGHFVRA 477
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELL-----SRKDLRN 281
G+ E + ++L E+ + FS L CLP W VP +++ R D+R+
Sbjct: 478 LGQAESKEAEQESLLLEHDVPYRPFSKAILDCLPPEGDSWVVPPKDMTHHAWRDRVDMRD 537
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL ++L +G GVHIADVSYFV P +D EA R T+VY+
Sbjct: 538 EIICSIDPPGCQDIDDALHAKQLPNGNIEAGVHIADVSYFVRPDNPMDAEAASRGTTVYL 597
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ ++I MLP LL + SL P V+RLAFS W++ ++V+ ++VI S +YE
Sbjct: 598 VDKRIDMLPHLLGTNLCSLRPYVERLAFSAVWEMTPDAEIVNVRFHKSVIASKAAFTYEE 657
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ + D S N + +SI+ L ++K LK KR GAL L
Sbjct: 658 AQ----LRKDDASKNDA---------------ITKSIRLLNSLAKKLKQKRMDAGALNLA 698
Query: 462 NSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH- 518
+ + D E P D + N L EEFMLLAN + AE I + FP +A+LRRH
Sbjct: 699 SPEVRIHLDSSECAAPIDVEQKEMRETNSLVEEFMLLANVSVAERIYQVFPMTAVLRRHL 758
Query: 519 --PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATR 575
P N L++ + ++LD SSSG SL++ + KD F+ L+ ATR
Sbjct: 759 PPPRTNFETLQDI--LLKRRNMELDVSSSGALAASLDKCVDP-KDP--AFNTLVRIMATR 813
Query: 576 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
M A YFCSG DT + HY LA +YTHFTSP+RRY D++ HR L AA+ E L+
Sbjct: 814 CMLSAEYFCSGSVARDT-FSHYGLAAGMYTHFTSPIRRYADVLAHRQLAAAINYEPLH 870
>gi|365960788|ref|YP_004942355.1| ribonuclease R [Flavobacterium columnare ATCC 49512]
gi|365737469|gb|AEW86562.1| ribonuclease R [Flavobacterium columnare ATCC 49512]
Length = 725
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/521 (34%), Positives = 259/521 (49%), Gaps = 56/521 (10%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
KRP V+ +IER R VG ++V + F + +T
Sbjct: 132 KRPEAEVIEVIERE--RMEFVGVIDVQKNFAF------------------------VTTA 165
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+PK + + K+ K +GD +V +I++W +++ P V V GR G
Sbjct: 166 NPKMYTDIFIPKEKIGEAK----DGD------VVLVKIEDWPKKADSPFGSVEKVLGRPG 215
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
E + +I+AIL E + F E + + + EE+ R+D+RN FTIDP A
Sbjct: 216 EHDTEIHAILAEYGLPYD-FPVEVEAYAKKLDTTIQPEEIAKRRDMRNVLTFTIDPKDAK 274
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D DDALS + L +G +GVHIADVS++V GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 275 DFDDALSFQVLENGNYEIGVHIADVSHYVQEGTILDDEAFKRATSVYLVDRVVPMLPEVL 334
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S SL P ++ FS +++N+ +VV++W GRTVI S + +YE AQ II+ K
Sbjct: 335 SNFACSLRPHEEKYTFSAVFEINAKAEVVNQWFGRTVIYSDQRFAYEEAQHIIETK---- 390
Query: 414 SSNTLGEGWPQLYGQFEWSD-VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
NT+ + D +V + L E++KIL+ R +GA+ + + F DE
Sbjct: 391 -GNTIPAEISLTEEAYIVPDAIVEATLKLDELAKILRRNRMNNGAISFDKVEVKFKLDEN 449
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P +D N L EEFMLLAN+ AE I + + + R H P+ KL +
Sbjct: 450 DEPVGVYFKIAKDANHLIEEFMLLANRKVAEFIGKQ-KKTFVYRIHDEPDENKLMNLQGI 508
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKD 590
SK G L+ S +SL E + K + + D L A R M A Y
Sbjct: 509 ISKFGYSLNFKSKDTISKSLNTLLENVAGKKEQNMVDTL---AIRTMSKAKYSTE----- 560
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
+ GHY LAF Y+HFTSP+RRYPD++VHR L L+ K
Sbjct: 561 --NIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQQYLDGAK 599
>gi|389749303|gb|EIM90480.1| RNB-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 1003
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 260/535 (48%), Gaps = 69/535 (12%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVPDREYIQLT 171
K+PTGRVV +I+R+ W Y S N +SLS ++ + T
Sbjct: 377 KQPTGRVVGVIKRN--------------WRAYVCHIDSTSLTSINSTSLS---QQTVFAT 419
Query: 172 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
P P++ + + P + ++ + ID+W+ S +P+ H + G+
Sbjct: 420 PVSRLLPRIRMRTRQAPSLLNQK------------ILVTIDKWDRTSRYPEGHFVRALGK 467
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE-----LLSRKDLRNFCI 284
E + ++L E + F L CLP W VP + R+DLR+ I
Sbjct: 468 VESKEAEQESLLLEFDVPYRPFGRAILDCLPSEGENWVVPPKSEGNAIWRDREDLRDMVI 527
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL RL +G GVHIADVS+FVLP +D EA R T+VY++ +
Sbjct: 528 CSIDPPGCQDIDDALHARRLPNGNIEAGVHIADVSHFVLPDNPMDSEAASRGTTVYLVDK 587
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP LL + SL P V+RLAFS W++ +V+ ++VI S +YE AQ
Sbjct: 588 RIDMLPALLGTNLCSLRPFVERLAFSCIWEMTEDAKIVNVRFTKSVIASKSAFTYEEAQI 647
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
D P L+ ++ I+ L ++ LK R GAL L + +
Sbjct: 648 RKDD--------------PNLH-----DEITEGIRLLNTLALKLKAGRMAAGALNLASPE 688
Query: 465 PVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---P 519
D E P D + N L EEFMLLAN + A+ I FP +A+LRRH P
Sbjct: 689 VKIHLDTAESSDPIDVEQKELRETNSLVEEFMLLANISVAKKIQETFPQTAVLRRHLPPP 748
Query: 520 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 578
N KL++ + GL LD SSSG SL++ L F+ L+ ATR M
Sbjct: 749 KTNFEKLQDI--LRKRKGLTLDVSSSGALADSLDKC---LDPSEPAFNTLVRIMATRCML 803
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
A YFCSG DT +GHY LA P+YTHFTSP+RRY D++ HR L+AA+ L+
Sbjct: 804 SAEYFCSGSVSRDT-FGHYGLATPIYTHFTSPIRRYADVLAHRQLSAAINYTPLH 857
>gi|119184632|ref|XP_001243197.1| hypothetical protein CIMG_07093 [Coccidioides immitis RS]
gi|392866079|gb|EAS28686.2| VacB and RNase II family 3'-5' exoribonuclease [Coccidioides
immitis RS]
Length = 1044
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 189/533 (35%), Positives = 272/533 (51%), Gaps = 74/533 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGS-RKDAKKNRSSLSVPDREYIQLTPT 173
+PT RVV +I+R+ R+ VG N GGS +A R ++ + + P
Sbjct: 380 QPTARVVGVIKRNWRQ--YVG--------NIDGGSFSSEASSGRR------QQAVFVIPM 423
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG--- 230
+ PK+ + + + + +R + ID W+ +S +P H + G
Sbjct: 424 DKRVPKIKIRTRQASELLGQR------------ILITIDAWDRDSRYPTGHFVRSLGELE 471
Query: 231 -RGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQ--EELL--SRKDLRNFC 283
+G E E A+L E + FS L+CLP W+VP ++ L RKDLR+
Sbjct: 472 TKGAETE----ALLLEYDVQYRPFSQTVLNCLPPEGHSWKVPGNLDDPLWKDRKDLRDLL 527
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
+ +IDP D+DD L L +G VGVHIADVS+FV P A+DIEA +R T+VY++
Sbjct: 528 VCSIDPPGCQDIDDTLHSRPLPNGNFEVGVHIADVSHFVQPNNAMDIEASMRGTTVYLVD 587
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
++I MLP+LL ++ SL P V+R AFS+ W++ ++V ++VI S SYE AQ
Sbjct: 588 KRIDMLPMLLGTDLCSLKPYVERFAFSVIWEMTPDAEIVSANFTKSVILSKEAFSYEQAQ 647
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
ID + + ++ +S+++L +SKIL+ KR GAL L +
Sbjct: 648 LRID-------------------DESKKDELTQSMRTLLRMSKILRQKRMDAGALNL--A 686
Query: 464 KPVFLFDEYGTPYDSVLSGRED----LNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 519
P + D V + N L EEFMLLAN T A I ++FP +ALLRRH
Sbjct: 687 SPEVRIETESELNDPVADVKTKALLATNSLVEEFMLLANITVASRIYQSFPQTALLRRHA 746
Query: 520 APNMRKLREFEAFCS-KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 577
P + + A S K GL LD SSS SL++ + F+ LI ATR M
Sbjct: 747 TPPPQNFEQLIAQLSKKRGLTLDVSSSLALANSLDKC---VDPSNPFFNTLIRILATRCM 803
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
A YFC+G ++++ HY LA +YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 804 TSAEYFCAGAHA-ESEFRHYGLASSIYTHFTSPIRRYADLVVHRQLAAAIGYE 855
>gi|410077995|ref|XP_003956579.1| hypothetical protein KAFR_0C04530 [Kazachstania africana CBS 2517]
gi|372463163|emb|CCF57444.1| hypothetical protein KAFR_0C04530 [Kazachstania africana CBS 2517]
Length = 1000
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 193/541 (35%), Positives = 266/541 (49%), Gaps = 73/541 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV I RS W Y G P+ +Q T
Sbjct: 386 QPTARVVGITRRS--------------WRLYVGQI------------APNSVDLQSNGTQ 419
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ ++++ K LP I+ R + ++ +V A +D+W +P H + G
Sbjct: 420 NVF--VILMDKCLP-KIRIRTRRANELLDKRIVIA-VDDWPATHKYPLGHFVRDLGGIET 475
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE-----------ELLSRKDLRN 281
VE + A+L E+ + FS + L CLP W+ P L R DLR+
Sbjct: 476 VEAETEALLLEHDVEYRPFSRKVLECLPAEGHDWKTPSNIKDPEALANDPLLAKRTDLRD 535
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL +RL +G VGVHIADV++FV PGTALD E R TSVY+
Sbjct: 536 KLICSIDPPGCVDIDDALHAKRLPNGNWEVGVHIADVTHFVKPGTALDAEGASRGTSVYL 595
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ ++I MLP+LL ++ SL P VDR AFS+ W+LN D+V+ ++VIRS SYE
Sbjct: 596 VDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELNEDADIVNVDFTKSVIRSREAFSYEQ 655
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ ID D + L G +++L +SK LK KR GAL L
Sbjct: 656 AQVRID---DSNQKDELTLG----------------MRALLHLSKKLKQKRLDAGALNLA 696
Query: 462 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
+ + V + E P + + N L EEFMLLAN + A I AFP +A+LRRH A
Sbjct: 697 SPEVKVHMDSETSDPGEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAA 756
Query: 521 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 576
P N L E + + + SS SL++ + +D Y F+ L+ +TR
Sbjct: 757 PPSTNFELLNEM--LHQRKNMTISLESSKALADSLDRCIDP-QDAY--FNTLVRIMSTRC 811
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L AA++ E L H
Sbjct: 812 MMAAQYFYSGAYS-YPDFKHYGLAVDIYTHFTSPIRRYCDVVAHRQLAAAIDYEPLSLMH 870
Query: 637 R 637
R
Sbjct: 871 R 871
>gi|303320481|ref|XP_003070240.1| exosome complex exonuclease RRP44, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240109926|gb|EER28095.1| exosome complex exonuclease RRP44, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 1044
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 189/533 (35%), Positives = 272/533 (51%), Gaps = 74/533 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGS-RKDAKKNRSSLSVPDREYIQLTPT 173
+PT RVV +I+R+ R+ VG N GGS +A R ++ + + P
Sbjct: 380 QPTARVVGVIKRNWRQ--YVG--------NIDGGSFSSEASSGRR------QQAVFVIPM 423
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG--- 230
+ PK+ + + + + +R + ID W+ +S +P H + G
Sbjct: 424 DKRVPKIKIRTRQASELLGQR------------ILITIDAWDRDSRYPTGHFVRSLGELE 471
Query: 231 -RGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQ--EELL--SRKDLRNFC 283
+G E E A+L E + FS L+CLP W+VP ++ L RKDLR+
Sbjct: 472 TKGAETE----ALLLEYDVQYRPFSQAVLNCLPPEGHSWKVPGNLDDPLWKDRKDLRDLL 527
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
+ +IDP D+DD L L +G VGVHIADVS+FV P A+DIEA +R T+VY++
Sbjct: 528 VCSIDPPGCQDIDDTLHSRPLPNGNFEVGVHIADVSHFVQPNNAMDIEASMRGTTVYLVD 587
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
++I MLP+LL ++ SL P V+R AFS+ W++ ++V ++VI S SYE AQ
Sbjct: 588 KRIDMLPMLLGTDLCSLKPYVERFAFSVIWEMTPDAEIVSANFTKSVILSKEAFSYEQAQ 647
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
ID + + ++ +S+++L +SKIL+ KR GAL L +
Sbjct: 648 LRID-------------------DESKKDELTQSMRTLLRMSKILRQKRMDAGALNL--A 686
Query: 464 KPVFLFDEYGTPYDSVLSGRED----LNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 519
P + D V + N L EEFMLLAN T A I ++FP +ALLRRH
Sbjct: 687 SPEVRIETESELNDPVADVKTKALLATNSLVEEFMLLANITVASRIYQSFPQTALLRRHA 746
Query: 520 APNMRKLREFEAFCS-KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 577
P + + A S K GL LD SSS SL++ + F+ LI ATR M
Sbjct: 747 TPPPQNFEQLIAQLSKKRGLTLDVSSSLALANSLDKC---VDPSNPFFNTLIRILATRCM 803
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
A YFC+G ++++ HY LA +YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 804 TSAEYFCAGAHA-ESEFRHYGLASSIYTHFTSPIRRYADLVVHRQLAAAIGYE 855
>gi|334184269|ref|NP_001189541.1| exosome complex exonuclease DIS3/RRP44 [Arabidopsis thaliana]
gi|330251545|gb|AEC06639.1| exosome complex exonuclease DIS3/RRP44 [Arabidopsis thaliana]
Length = 1012
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 205/680 (30%), Positives = 311/680 (45%), Gaps = 147/680 (21%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP----DREYIQL 170
RP+GRVV +I R+ W +Y G + +S+P +
Sbjct: 381 RPSGRVVGVIRRN--------------WHSYCG--------SLEPMSLPAGSGGTAHALF 418
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
+ PK+ + + L + ++M +V A +D W+ +S +P H + G
Sbjct: 419 VSKDRRIPKIRINTRQLQN-----------LLDMRIVVA-VDSWDRQSRYPSGHYVRPIG 466
Query: 231 RGG------EVEPQIN----------------AILYENAICCSGFSPESLSCLPCVPWEV 268
+ G EV IN +L EN + S FS + L+CLP +PW V
Sbjct: 467 KIGDKETETEVRDHINLFDSILVGVRWARVGKVVLIENDVDYSPFSSQVLACLPPLPWSV 526
Query: 269 PQEELLS--RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV------------H 314
E++ + R+DLR+ +F++DP D+DDAL L +G +GV +
Sbjct: 527 SSEDVSNPVRQDLRHLLVFSVDPPGCKDIDDALHCTSLPNGNFELGVRILESSDSHKYDY 586
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADV+ FV PGT LD EA R TSVY+++R+I MLP L+E++ SL V+RLAFS+ W+
Sbjct: 587 IADVTNFVHPGTPLDDEASKRGTSVYLVERRIDMLPKPLTEDICSLRADVERLAFSVIWE 646
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
++ +++ +++I+S LSY AQ +D +S T
Sbjct: 647 MSPDAEIISTRFTKSIIKSSAALSYIEAQARMDDSRLTDSLTT----------------- 689
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEF 493
++++ ++KI++ +R GAL L +++ F D E P + + + N + EEF
Sbjct: 690 --DLRNMNTLAKIMRQRRIDRGALTLASAEVKFDIDPENHDPLNIGMYQILEANQMVEEF 747
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
ML AN + A I + FP +LLRRHP P L + GL LD SSS SL+
Sbjct: 748 MLAANVSVAGQILKLFPSCSLLRRHPTPTREMLEPLLRTAAAIGLTLDVSSSKALADSLD 807
Query: 554 QAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLR 612
+A +D Y F+ LI ATR M A YFCSGD ++ HY LA P+YTHFTSP+R
Sbjct: 808 RAVG--EDPY--FNKLIRILATRCMTQAVYFCSGDLS-PPEYHHYGLAAPLYTHFTSPIR 862
Query: 613 RYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREA 672
RY D+ VHR L A+L K L +F D+
Sbjct: 863 RYADVFVHRLLAASLGIYK----------------------LPTVFQDRPQ--------- 891
Query: 673 LSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLA 732
L +VA + N R + A V+LY+ I + + EARV+
Sbjct: 892 ---------------LTSVADNLNYRHRNAQMAGRASVELYVLIYFRTRPT-DEEARVVK 935
Query: 733 LGPRFMTIYIEKLAIERRIY 752
+ +++ K IE +Y
Sbjct: 936 IRSNGFIVFVPKYGIEGPVY 955
>gi|381186560|ref|ZP_09894130.1| 3'-to-5' exoribonuclease RNase R [Flavobacterium frigoris PS1]
gi|379651404|gb|EIA09969.1| 3'-to-5' exoribonuclease RNase R [Flavobacterium frigoris PS1]
Length = 729
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 176/521 (33%), Positives = 267/521 (51%), Gaps = 57/521 (10%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
K+P G V+ ++ER+ + VG +++ + F++ ++
Sbjct: 132 KKPEGEVIEVLERN--KTDFVGVIDIQKNFSF------------------------VSTA 165
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+PK + + KD E+GD +V I++W ++ P V+ V G+ G
Sbjct: 166 NPKMYTDIFIPKDKIGE----AEQGD------VVLVHIEDWPSKADSPFGKVIKVLGKPG 215
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
E + +I+AIL E + S F E + + + + E+ R+D+R+ FTIDP A
Sbjct: 216 EHDTEIHAILAEYGLP-SEFPIEVETYAQKIDTSITEAEIAKRRDMRDTLTFTIDPKDAK 274
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D DDALS ++L +G +G+HIADVSY++ GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 275 DFDDALSFKKLENGNYEIGIHIADVSYYLEEGTILDDEAYQRATSVYLVDRVVPMLPEVL 334
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S SL P ++ FS ++++ V+ W GRTVI S + +YE AQ II+ K D
Sbjct: 335 SNFACSLRPQEEKYTFSAVFEIDDKCKVISEWFGRTVIYSDQRFAYEEAQYIIETKDD-- 392
Query: 414 SSNTLGEGWPQLYGQFEWS-DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
T+ E ++ S ++V + L E++KI + KR DGA+ + + F +
Sbjct: 393 ---TIPEEISITGSSYQVSPEIVSATLKLDELAKIFRRKRMNDGAISFDKVEVKFDLSDE 449
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
G P +D N L EEFMLLANK AE + + + + R H PN KL +A
Sbjct: 450 GEPEGVYFKVSKDANHLIEEFMLLANKKVAEFVGKQ-KKTFIYRIHDEPNEDKLFAMQAV 508
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKD 590
+K G ++D G Q+L + E + K + L D L A R M A Y S D
Sbjct: 509 IAKFGHKIDF-KQGSISQALNKLMEDVNGKKEQNLIDTL---AIRTMSKAKY--STD--- 559
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
+ GHY LAF Y+HFTSP+RRYPD++VHR L L+ K
Sbjct: 560 --NIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQFYLDGAK 598
>gi|424843137|ref|ZP_18267762.1| ribonuclease R [Saprospira grandis DSM 2844]
gi|395321335|gb|EJF54256.1| ribonuclease R [Saprospira grandis DSM 2844]
Length = 986
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 179/528 (33%), Positives = 263/528 (49%), Gaps = 81/528 (15%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+P GRVV I++R+ R+ +G L V++ F + +PD +
Sbjct: 165 KPEGRVVKILKRN--RETFIGTLVVSKRFCF---------------VIPDENTV------ 201
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNE--ESPFPQAHVLHVFGRG 232
M ++V + L EG + + V I EW + + P+ V V G+
Sbjct: 202 ----PMDIIVD------RNSLMEGQSD---DKVVVHITEWPKPNSNDNPKGVVTAVLGKA 248
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G + ++ +IL + F E ++ +P E+P+ E+ R DLR FTIDP+TA
Sbjct: 249 GGNDIEMKSILIKQGFELD-FPEEVMAESEAIPLEIPEAEIQKRLDLRQIPTFTIDPATA 307
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D DDALS+E L +G R+G+HIADV+Y+V G+ LD EA R+TSVY++ R +PMLP
Sbjct: 308 KDFDDALSVEMLDNGNYRIGIHIADVTYYVAKGSPLDKEAAKRTTSVYLVDRVLPMLPEK 367
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS V SL P D+L FS ++LN+ G VV+ W G+TVI S + +YE AQ+I+DG
Sbjct: 368 LSNGVCSLRPHEDKLTFSALFELNAKGHVVEEWFGKTVIHSDQRFAYEEAQEILDG---- 423
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
EG Y Q ++ L + IL+ RF GA+ E+ + F DE
Sbjct: 424 ------AEG---PYSQ--------ELRILNRYAHILRKARFKKGAISFESPEVRFKLDED 466
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA-----LLRRHPAPNMRKLR 527
G P D L R+D + L E+FMLLAN+ I + + + R H P+M K+
Sbjct: 467 GKPVDVYLKHRKDAHMLVEDFMLLANRRVGAKIMNIYRNGGKEVPFVYRIHDLPDMEKVN 526
Query: 528 EFEAFCSKHGLQLDTSS----SGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 583
F F ++ G +L +G F++ L+ A K + +L R M A+Y
Sbjct: 527 GFGKFAAQLGYRLKIQDVEEVAGAFNKMLKAAEGKPE-----HAVLHQLGIRTMSKAAYS 581
Query: 584 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
+ GHY L F Y+HFTSP+RRY D++VHR L L EK
Sbjct: 582 TQ-------NIGHYGLGFEDYSHFTSPIRRYADVLVHRNLQHFLMHEK 622
>gi|390369060|ref|XP_793897.3| PREDICTED: DIS3-like exonuclease 1-like, partial
[Strongylocentrotus purpuratus]
Length = 839
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 176/518 (33%), Positives = 272/518 (52%), Gaps = 44/518 (8%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
P GRVV I+ER+ RD + F ++ + G+ + +K I + P
Sbjct: 324 PCGRVVGILERN-WRDYVATFPEKDE---VQTGASRGSK-------------ILVIPWDY 366
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ V + + DA + +V R+D W +S +P H + G G++
Sbjct: 367 RIPKIRVSTR-----------QADALNDQRIVV-RLDNWPADSQYPNGHYVRSLGPIGQL 414
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVP----QEELLSRKDLRN-FCIFTIDPS 290
E ++ A L EN++ FS + +P W+ P EE+ RKDLRN IF+IDP
Sbjct: 415 ETEVAATLIENSLPVGPFSEGQIKEMPVNTWDDPWLMTDEEMGKRKDLRNSHLIFSIDPK 474
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DD LS+ L +G +GVHIADVSYFV G+ D+EA++RST+VY+ R+ MLP
Sbjct: 475 GCEDVDDTLSVRELGNGNIELGVHIADVSYFVKEGSLTDLEARLRSTTVYLADRRYDMLP 534
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR---WIGRTVIRSCCKLSYEHAQDIID 407
+LS ++ SL GVDR A S+ W+L V + W GRT+IRS K+ YE AQ + D
Sbjct: 535 EILSADLCSLIGGVDRYAVSVLWELKPFTFEVIKDKVWYGRTIIRSAYKMFYEAAQMLHD 594
Query: 408 GKFDVESSNTLGE--GWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
GK S++ + E + + E + ++ L +++ LK +R GA++LE ++
Sbjct: 595 GK--TLSADDIPELRDVDDMTKELELQRLKWAVDQLMMIARRLKAQREVGGAVQLEGTEV 652
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
+E + V +++ E M+ AN A+ IA+++P +ALLR HP P +
Sbjct: 653 KVELNEEQEIENLVPKQTMEIHETIAECMIYANHWVAKKIAQSYPQAALLRHHPLPRQEQ 712
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
++ G +DTS++ + +SL+ + + D V IL + AT+ M A YF +
Sbjct: 713 FQDLITSARSKGFLVDTSTNKKLAESLDGCID--RRDPVFNKILRSLATKAMSNALYFST 770
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
G D + HY LA YTHFTSP+RRY D++VHR L
Sbjct: 771 GSLSVDQ-FFHYGLAMDRYTHFTSPIRRYADIIVHRLL 807
>gi|189188860|ref|XP_001930769.1| ribonuclease R [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972375|gb|EDU39874.1| ribonuclease R [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 989
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 187/531 (35%), Positives = 260/531 (48%), Gaps = 67/531 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV II+R+ W Y G SS S ++ + L P
Sbjct: 382 QPTARVVGIIKRN--------------WRQYVGHI-DRDSVRSSSKSSRQQQTVFLVPMD 426
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK+ + + + + +R V A ID W+ +S +P H + G
Sbjct: 427 KRIPKIRIRTRQAGELLGQR------------VLATIDSWDRDSRYPVGHFVRSLGELES 474
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCI 284
+G E E A+L E + F L CLP W+VP R+DLR+ +
Sbjct: 475 KGAETE----ALLLEWDVQYKPFPKTVLDCLPAEGHDWKVPASMDDPGWKGRRDLRDLLV 530
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL +L +G +VGVHIADVS+FV P A+D EA R T+VY++ +
Sbjct: 531 CSIDPVGCVDIDDALHAHKLPNGNYQVGVHIADVSHFVKPNNAMDKEASQRGTTVYLVDK 590
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP+LL ++ SL P V+R AFS+ W++ D+V ++VIRS SYE AQ
Sbjct: 591 RIDMLPMLLGTDLCSLKPYVERYAFSVLWEVTEDADIVSSHFTKSVIRSREAFSYEQAQI 650
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
ID + D+ + +++L +SK LK KR GAL L + +
Sbjct: 651 RID-------------------DNSQQDDLTKGMRTLLMLSKKLKQKRMDAGALNLSSPE 691
Query: 465 -PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
V E P D D N L EEFMLLAN + A AFP +ALLRRH AP
Sbjct: 692 VKVRTESETSDPVDVETKKHLDTNSLVEEFMLLANISVAAKNYEAFPQTALLRRHAAPPK 751
Query: 524 RKLREFE-AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
E + K G++L T SS SL++ + F+ L+ ATR M A
Sbjct: 752 TNFEELDNQLKVKKGMELKTDSSKALADSLDKC---VDPGNPFFNTLVRIMATRCMMSAE 808
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
YFC+G + ++ HY LA +YTHFTSP+RRY DL HR L AA+E E+L
Sbjct: 809 YFCAGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLEAHRQLAAAIEYEQL 858
>gi|212542443|ref|XP_002151376.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Talaromyces marneffei ATCC 18224]
gi|210066283|gb|EEA20376.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Talaromyces marneffei ATCC 18224]
Length = 1025
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 181/527 (34%), Positives = 262/527 (49%), Gaps = 68/527 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT R+V I++R N Q+ + S + N S ++ + + P
Sbjct: 373 QPTARIVGIVKR-----------NWRQYVGHIDASSTSLQGN----SGRRQQTVFVLPMD 417
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK+ + + + + +R + +D W+ +S +P H + G
Sbjct: 418 KRIPKIRIRTRQAAELLGQR------------ILVTVDSWDRDSRYPTGHFVRSLGELET 465
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDLRNFCI 284
+G E E A+L E + F L CLP VP + R+DLR+ +
Sbjct: 466 KGAETE----ALLLEYDVQYRPFPKVVLDCLPPEGHDWRVPTNMDHPGWHKRRDLRDLLV 521
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL L +G VGVHIADVS FV P A+D+EA +R T+VY++ +
Sbjct: 522 CSIDPPGCQDIDDALHARLLPNGNYEVGVHIADVSNFVKPNNAMDLEASLRGTTVYLVDK 581
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP+LL ++ SL P V+R AFS W++ G++V ++VI S SYE AQ
Sbjct: 582 RIDMLPMLLGTDLCSLKPYVERFAFSTIWEITPNGEIVSSDFTKSVILSREAFSYEQAQL 641
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
ID ++S T D+ +S+++L SKIL+ KR GAL L + +
Sbjct: 642 RID-----DASQT--------------DDLTQSMRTLLHFSKILRQKRMDAGALNLASPE 682
Query: 465 -PVFLFDEYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
+ E P V + N L EEFMLLAN T A I AFP +ALLRRH +P
Sbjct: 683 IRIETESELNDPLTDVKTKAHLATNSLVEEFMLLANITVASKIYSAFPQTALLRRHASPP 742
Query: 523 MRKLREFEA-FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLA 580
+ + A K GL LD SSSG SL++ + F+ L+ ATR M A
Sbjct: 743 PQNFEQLAAQLQKKRGLHLDVSSSGALADSLDRC---VDPKNPFFNTLVRILATRCMTSA 799
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
YF +G + ++ HY LA P+YTHFTSP+RRY DL+VHR L AA+
Sbjct: 800 EYFTAGAHA-EAEFRHYGLASPIYTHFTSPIRRYADLIVHRQLAAAI 845
>gi|302503963|ref|XP_003013941.1| hypothetical protein ARB_08053 [Arthroderma benhamiae CBS 112371]
gi|291177507|gb|EFE33301.1| hypothetical protein ARB_08053 [Arthroderma benhamiae CBS 112371]
Length = 1044
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 184/527 (34%), Positives = 264/527 (50%), Gaps = 68/527 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT +VV II+R N Q+ + GS +++S + ++ + + P
Sbjct: 380 QPTAKVVGIIKR-----------NWRQYVGHIDGS----STSQASSAGRRQQTVFVIPMD 424
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK+ + + + + +R + ID W+ +S +P H + G
Sbjct: 425 KRVPKIRIRTRQANELMGQR------------ILITIDAWDRDSRYPVGHFVRSLGEVET 472
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCI 284
+G E E A+L E + F L CLP W+VP++ RKDLR+ +
Sbjct: 473 KGAETE----ALLLEYDVQYRPFPQTVLDCLPPEGHDWKVPKDMSDPGWNDRKDLRDLLV 528
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL L +G VGVHIADVS FV P A+D EA +R T+VY++ +
Sbjct: 529 CSIDPPGCQDIDDALHSRPLPNGNFEVGVHIADVSNFVRPNNAMDTEASMRGTTVYLVDK 588
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP+LL ++ SL P V+R AFS+ W++ +VV ++VI S SYE AQ
Sbjct: 589 RIDMLPMLLGTDLCSLKPHVERYAFSVLWEITPDAEVVSSSFTKSVIFSREAFSYEQAQL 648
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
ID Q + D+ S+++L +SK+L+ KR GAL L + +
Sbjct: 649 RID-------------------DQSKTDDLTASMRTLLRLSKLLRQKRMDAGALNLASPE 689
Query: 465 PVFLFD-EYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
D E P V + D N L EEFMLLAN + A I +FP +ALLRRH P
Sbjct: 690 VRIETDSELSDPVADVKTKALLDTNSLVEEFMLLANISVAARIYESFPQTALLRRHATPP 749
Query: 523 MRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLA 580
E K L LD SSS SL++ + + F+ LI ATR M A
Sbjct: 750 PSNFEELITQLSKKRNLTLDVSSSLALANSLDKC---VDERNPFFNTLIRILATRCMTSA 806
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
YFC+G ++++ HY LA P+YTHFTSP+RRY DLVVHR L AA+
Sbjct: 807 EYFCAG-AHSESEFRHYGLASPIYTHFTSPIRRYADLVVHRQLAAAI 852
>gi|315039361|ref|XP_003169056.1| mitotic control protein dis3 [Arthroderma gypseum CBS 118893]
gi|311337477|gb|EFQ96679.1| mitotic control protein dis3 [Arthroderma gypseum CBS 118893]
Length = 1043
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 185/530 (34%), Positives = 266/530 (50%), Gaps = 68/530 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT +VV II+R+ R+ VG ++ + + R+ ++ + + P
Sbjct: 380 QPTAKVVGIIKRNWRQ--YVGHIDGSSSSHASSAGRR-------------QQTVFVIPMD 424
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK I+ R +G+ + ++ ID W+ +S +P H + G
Sbjct: 425 KRVPK-----------IRIRTRQGNELMGQRILIT-IDSWDRDSRYPVGHFVRSLGEVET 472
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCI 284
+G E E A+L E + F L CLP W+VP ++ RKDLR +
Sbjct: 473 KGAETE----ALLLEYDVQYKPFPQTVLDCLPPEGHDWKVPADKSDPGWKDRKDLRELLV 528
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL L++G VGVHIADVS FV P A+D EA +R T+VY++ +
Sbjct: 529 CSIDPPGCQDIDDALHSRPLTNGNFEVGVHIADVSNFVRPNNAMDTEASMRGTTVYLVDK 588
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP+LL ++ SL P V+R AFS+ W++ ++V ++VI S SYE AQ
Sbjct: 589 RIDMLPMLLGTDLCSLKPHVERYAFSVLWEITPEAEIVSSSFTKSVIFSREAFSYEQAQL 648
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
ID Q + D+ S+++L +SK+L+ KR GAL L + +
Sbjct: 649 RID-------------------DQSKTDDLTASMRTLLRLSKLLRQKRMDAGALNLASPE 689
Query: 465 PVFLFD-EYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
D E P V + D N L EEFMLLAN + A I +FP +ALLRRH P
Sbjct: 690 VRIETDSELSDPVADVKTKALLDTNSLVEEFMLLANISVAARIYESFPQTALLRRHATPP 749
Query: 523 MRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLA 580
E K L LD SSS SL++ + + F+ LI ATR M A
Sbjct: 750 PSNFEELITQLSKKRNLTLDVSSSLALANSLDKC---VDERNPFFNTLIRILATRCMTSA 806
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
YFC+G ++++ HY LA P+YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 807 EYFCAG-AHSESEFRHYGLASPIYTHFTSPIRRYADLVVHRQLAAAIGYE 855
>gi|404486882|ref|ZP_11022070.1| ribonuclease R [Barnesiella intestinihominis YIT 11860]
gi|404335936|gb|EJZ62402.1| ribonuclease R [Barnesiella intestinihominis YIT 11860]
Length = 712
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 187/564 (33%), Positives = 273/564 (48%), Gaps = 89/564 (15%)
Query: 75 INGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKR---PTGRVVSIIERSPRRD 131
+NG + +D E + +++N M+A++ + Y +R G VV I+E++P+
Sbjct: 91 VNGKNHVITDDDESIFIAERN-AMHAMDGDRVRVLVYAKRRGHDAEGEVVEIVEKTPQI- 148
Query: 132 GIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDL--PD 189
VG L V + F + K VL D+ P
Sbjct: 149 -FVGTLEVQKHFAFLLTDNK------------------------------VLANDIFIPK 177
Query: 190 SIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC 249
+ K + GD + RI EW + + P V+ + G GE +I+AIL E +
Sbjct: 178 TALKGGKTGDKAV------VRITEWPDRARNPYGEVVDILGPAGENNTEIHAILAEFGLP 231
Query: 250 CSGFSPESL-SCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGI 308
PE++ +P + EE+ +R+D R FTIDP A D DDALSI RLS+G
Sbjct: 232 YR--YPEAVEKAANKIPDAITDEEIAAREDFRQVTTFTIDPKDAKDFDDALSIRRLSNGN 289
Query: 309 SRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 368
VGVHIADVSY+V PG+ +D EA+ R TSVY++ R +PMLP L E+ SL P D+L
Sbjct: 290 WEVGVHIADVSYYVKPGSIIDKEAESRGTSVYLVDRVVPMLPERLCNEICSLRPDEDKLT 349
Query: 369 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 428
FS ++LN +V I RTVIRS + +YE AQ++I+ GEG
Sbjct: 350 FSCIFELNGNAEVQKSHIARTVIRSNRRFAYEEAQEVIE----------TGEG------- 392
Query: 429 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNF 488
D I +L ++++ L+ +RF +G++ + + F DE G P ++ N
Sbjct: 393 ----DYKEEILALNDLAQKLRKRRFDNGSINFDRHEVKFDIDESGKPIGVYFKVSKEANK 448
Query: 489 LFEEFMLLANKTAAEVI----ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS 544
L EEFMLLAN+T AE I P + + R H P+ K+ F AF ++ G ++ T
Sbjct: 449 LIEEFMLLANRTVAEFIGKPKDGKKPKAFVYRVHDLPDPDKMASFAAFITRFGYKIKTEG 508
Query: 545 SGQ-----FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYAL 599
S + L + K +++ V A R M A Y + GHY L
Sbjct: 509 SKADLSKGINSLLANVQGKPEENLVE-----TIAIRAMAKAVYTT-------VNIGHYGL 556
Query: 600 AFPVYTHFTSPLRRYPDLVVHRTL 623
+F YTHFTSP+RRYPDL+VHR L
Sbjct: 557 SFDYYTHFTSPIRRYPDLMVHRLL 580
>gi|367043660|ref|XP_003652210.1| hypothetical protein THITE_2113438 [Thielavia terrestris NRRL 8126]
gi|346999472|gb|AEO65874.1| hypothetical protein THITE_2113438 [Thielavia terrestris NRRL 8126]
Length = 985
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 182/527 (34%), Positives = 259/527 (49%), Gaps = 59/527 (11%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT +VV +++R+ R+ VG ++ + RK ++ + L P
Sbjct: 375 QPTAKVVGVVKRNWRQ--YVGHIDQSSVSQSAQQGRK-------------QDTVFLIPMD 419
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
K PK+ + + + + + KR + ID W+ S P H + G
Sbjct: 420 KKIPKIRLRTRQVAELVGKR------------ILVTIDAWDRSSRHPTGHFVRSLGEMET 467
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCIFTID 288
+ A+L E + F L CLP W VPQ R+DLR+ I +ID
Sbjct: 468 KAAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWRVPQSTDDPGWRGREDLRHLLICSID 527
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P D+DDAL L +G VGVHIADVS+FV P TA+D EA +R T+VY++ ++I M
Sbjct: 528 PIGCQDIDDALHSRPLPNGNIEVGVHIADVSHFVKPNTAMDAEASIRGTTVYLVDKRIDM 587
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP+LL ++ SL P V+R AFS+ W+L+ D+V+ ++VI+S SYE AQ +D
Sbjct: 588 LPMLLGTDLCSLKPYVERYAFSVLWELSPDADIVNVRFTKSVIKSREAFSYEQAQLRVDD 647
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVF 467
+ D+ +SI++L +S+ LK KR GAL L + + V
Sbjct: 648 P-------------------SQQDDLTKSIRTLLALSRKLKQKRMDAGALSLSSPEVKVQ 688
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
+ E P D D L EEFMLLAN + A I AFP +A+LRRH AP
Sbjct: 689 MESETSDPIDVKTKELLDTMSLVEEFMLLANVSVARKIYEAFPQTAILRRHGAPPKTNFD 748
Query: 528 EF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCS 585
E K GL L+ SS SL+ + + F+ L+ ATR M A YFCS
Sbjct: 749 ELANQLRVKRGLDLNVESSRALADSLDACVDPKEP---FFNTLVRIMATRCMMAAEYFCS 805
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
G + ++ HY LA +YTHFTSP+RRY DLV HR L AA+ E +
Sbjct: 806 GT-QAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIGYEAV 851
>gi|395802577|ref|ZP_10481829.1| ribonuclease R [Flavobacterium sp. F52]
gi|395435018|gb|EJG00960.1| ribonuclease R [Flavobacterium sp. F52]
Length = 727
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 175/519 (33%), Positives = 262/519 (50%), Gaps = 55/519 (10%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
KRP G V+ +IER + VG +++ F + ++
Sbjct: 132 KRPEGEVIEVIERD--KTEFVGVIDMQPNFAF------------------------VSTA 165
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+PK + + KD E GD +V +I++W + + P V+ V G+ G
Sbjct: 166 NPKMYTDIFIPKDKIGE----AENGD------VVLVKIEDWPKRADSPFGSVIRVLGKPG 215
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
E +I+AIL E + F E + + + E+ R+D+R+ FTIDP A
Sbjct: 216 EHNTEIHAILAEYGLPAD-FPVEVEVFAQKLDTSIQESEIAKRRDMRDTLTFTIDPKDAK 274
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D DDALS ++L +G +G+HIADVSY++ GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 275 DFDDALSFKKLENGNFEIGIHIADVSYYLEEGTILDDEAYQRATSVYLVDRVVPMLPEVL 334
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S SL P ++ FS ++++ V+++W GRTVI S + +YE AQ II+ K
Sbjct: 335 SNFACSLRPNEEKYTFSAIFEVSPTAQVINQWFGRTVIYSDQRFAYEEAQHIIETK---- 390
Query: 414 SSNTLGEGWPQLYGQFEWSD-VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
+NT+ + SD +V + L E++KIL+ KR GA+ + + F +E
Sbjct: 391 GNNTIPVDISITGESYVVSDEIVEATLKLDELAKILRKKRMQQGAISFDKVEVKFNLNEE 450
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
G P +D N L EEFMLLAN+ AE I + + + R H PN KL +
Sbjct: 451 GEPEGVYFKISKDANHLIEEFMLLANRKVAEYIGKQ-KKTFVYRIHDEPNEDKLIAMQTV 509
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKD 590
+K G ++D + G +S+ E++ K + L D L A R M A Y S D
Sbjct: 510 IAKFGYKIDFRTKGDIAKSINALMEEVNGKKEQNLIDTL---AIRSMSKAKY--STD--- 561
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
+ GHY LAF Y+HFTSP+RRYPD++VHR L L+
Sbjct: 562 --NIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQYYLDG 598
>gi|54114933|gb|AAH26166.1| DIS3 mitotic control homolog (S. cerevisiae)-like 2 [Homo sapiens]
gi|71051508|gb|AAH36113.2| DIS3 mitotic control homolog (S. cerevisiae)-like 2 [Homo sapiens]
Length = 619
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 158/402 (39%), Positives = 220/402 (54%), Gaps = 40/402 (9%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDAPVTKDETTCISQDTRALSEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVH
Sbjct: 350 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+IRSC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 470 LTPEGKILDEWFGRTIIRSCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEV 525
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTP 475
+++ +L+ ++K L+ +RF DGALRL+ K F D E G P
Sbjct: 526 HQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAFTLDHETGLP 567
>gi|157928154|gb|ABW03373.1| DIS3 mitotic control homolog (S. cerevisiae)-like 2 [synthetic
construct]
gi|157928854|gb|ABW03712.1| DIS3 mitotic control homolog (S. cerevisiae)-like 2 [synthetic
construct]
Length = 612
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 158/402 (39%), Positives = 220/402 (54%), Gaps = 40/402 (9%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 197 DGDAPVTKDETTCISQDTRALSEKSLQR-------------SAKVVYILEKKHSR-AATG 242
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 243 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 286
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 287 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 342
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVH
Sbjct: 343 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVH 402
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 403 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 462
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+IRSC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 463 LTPEGKILDEWFGRTIIRSCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEV 518
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTP 475
+++ +L+ ++K L+ +RF DGALRL+ K F D E G P
Sbjct: 519 HQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAFTLDHETGLP 560
>gi|119591395|gb|EAW70989.1| hCG2013107, isoform CRA_d [Homo sapiens]
Length = 619
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 158/402 (39%), Positives = 220/402 (54%), Gaps = 40/402 (9%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDAPVTKDETTCISQDTRALSEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVH
Sbjct: 350 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+IRSC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 470 LTPEGKILDEWFGRTIIRSCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEV 525
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTP 475
+++ +L+ ++K L+ +RF DGALRL+ K F D E G P
Sbjct: 526 HQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAFTLDHETGLP 567
>gi|146298778|ref|YP_001193369.1| ribonuclease R [Flavobacterium johnsoniae UW101]
gi|146153196|gb|ABQ04050.1| ribonuclease R [Flavobacterium johnsoniae UW101]
Length = 726
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 176/519 (33%), Positives = 263/519 (50%), Gaps = 56/519 (10%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
KRP G V+ +IER + VG +++ F + ++
Sbjct: 132 KRPEGEVIEVIERD--KTEFVGVIDIQPNFAF------------------------VSTA 165
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+PK + + KD +L E + ++V +I++W + + P V+ V G+ G
Sbjct: 166 NPKMYTDIFIPKD-------KLGEAENG---DVVLVKIEDWPKRADSPFGSVIRVLGKPG 215
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
E +I+AIL E + S F E + + + E+ R+D+R+ FTIDP A
Sbjct: 216 EHNTEIHAILAEYGL-PSDFPVEVEVYAQKLDTSIQESEIAKRRDMRDTLTFTIDPKDAK 274
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D DDALS ++L +G +G+HIADVSY++ GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 275 DFDDALSFKKLENGNFEIGIHIADVSYYLEEGTILDDEAYQRATSVYLVDRVVPMLPEVL 334
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S SL P ++ FS ++++ V+++W GRTVI S + +YE AQ II+ K
Sbjct: 335 SNFACSLRPNEEKYTFSAIFEVSPTAQVINQWFGRTVIYSDQRFAYEEAQYIIETK---- 390
Query: 414 SSNTLGEGWPQLYGQFEWSDVVR-SIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
NT+ + SD +R + L E++KIL+ KR GA+ + + F D
Sbjct: 391 -DNTIPVDVSITGESYVVSDEIREATLKLDELAKILRKKRMQQGAISFDKVEVKFNLDAE 449
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
G P +D N L EEFMLLAN+ AE I + + + R H PN KL +
Sbjct: 450 GEPEGVYFKISKDANHLIEEFMLLANRKVAEYIGKQ-KKTFVYRIHDEPNEDKLIAMQTV 508
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKD 590
+K G ++D + G +SL E++ K + L D L A R M A Y S D
Sbjct: 509 IAKFGYKIDFRNKGDIAKSLNSLMEEVNGKKEQNLIDTL---AIRSMSKAKY--STD--- 560
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
+ GHY LAF Y+HFTSP+RRYPD++VHR L L+
Sbjct: 561 --NIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQYYLDG 597
>gi|350401245|ref|XP_003486097.1| PREDICTED: exosome complex exonuclease RRP44-like [Bombus
impatiens]
Length = 981
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 188/592 (31%), Positives = 284/592 (47%), Gaps = 83/592 (14%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
K PTG+VV II R+ R+ + + Q N +G R P
Sbjct: 333 KTPTGKVVGIIRRNWRQ-----YCGILQPSNIEGNVRH-----------------LFVPA 370
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
K PK+ + + K+R+ +VA ID W S +P H + G G
Sbjct: 371 ERKIPKIRIETRQYTVLCKQRI----------IVA--IDSWPRNSRYPLGHFVRALGEIG 418
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ IL E+ I S FS LS LP + W V ++ R+DLR + ++DP T
Sbjct: 419 NKTTENEVILLEHDIPHSRFSDAVLSSLPEISWRVTDVDIAQREDLRYLDVCSVDPPGCT 478
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL L +G VGVHIADV++FV PGTALD EA +RST+VY++ +I M+P LL
Sbjct: 479 DIDDALHCRDLPNGNLEVGVHIADVTHFVRPGTALDKEAALRSTTVYLVDTRIHMIPELL 538
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S SL ++L FS W+++ ++++ ++VI S ++Y+ AQ ID DV
Sbjct: 539 STNFCSLREKEEKLTFSCIWEMDRDANIINTRYCKSVICSRAAMTYDEAQLKID---DVT 595
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EY 472
++L V+S+++L ++K LK +R +GAL L + + F D E
Sbjct: 596 QQDSL----------------VKSLRNLNNLAKKLKKRRLDNGALLLASPEVRFEVDCET 639
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P + + + N + EEFMLLAN + A+ I FP+ A+LRRHP P
Sbjct: 640 HDPIEVEVKKLRETNSMVEEFMLLANISVAKKILEEFPECAVLRRHPEPPPTNFEPLIKA 699
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 591
G ++ S SL + K+ F+ ++ ATR M A YF SG
Sbjct: 700 AKNQGFTINVDSGKALADSLNKCH---KESNPYFNTMLRILATRCMMQAVYFVSG-MHQP 755
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY---------------WKH 636
+++ HY LA PVYTHFTSP+RRY D++VHR L + A+ Y +
Sbjct: 756 SEYYHYGLACPVYTHFTSPIRRYADVMVHRLLAVCIGADATYPDLLDKKKNHTLCQNMNY 815
Query: 637 RRMLPKNNHREGVRGRFLTGIFYDKDAAESLEG------REALSVAALKYGV 682
R + + ++R V T +F+ ++ + EG + AL + +KYG+
Sbjct: 816 RHRMAQYSNRASV--ALNTHLFF-REKIQDEEGYILFVRKNALQILIIKYGL 864
>gi|70993518|ref|XP_751606.1| exosome complex exonuclease exoribonuclease (Rrp44) [Aspergillus
fumigatus Af293]
gi|66849240|gb|EAL89568.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Aspergillus fumigatus Af293]
gi|159125468|gb|EDP50585.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Aspergillus fumigatus A1163]
Length = 1034
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 189/564 (33%), Positives = 280/564 (49%), Gaps = 70/564 (12%)
Query: 79 HPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLN 138
+P D+ E V+ ++ +++ S +PT +VV +I+R+ R+ VG ++
Sbjct: 345 NPEAEDNEEVVTEKERKALQEEVKKAHGK-HSEGRPQPTAKVVGVIKRNWRQ--YVGHVD 401
Query: 139 VNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEG 198
+ R+ ++ + + P + PK+ V + D + +R+
Sbjct: 402 QSSTGASASSGRR-------------QQNVFVLPMDKRIPKIRVRTRQASDLLGQRI--- 445
Query: 199 DATIEMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFS 254
LV ID W+ +S +P H + G +G E E A+L E + F
Sbjct: 446 -------LVT--IDAWDRDSRYPTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFP 492
Query: 255 PESLSCLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGI 308
L CLP W+VP ++ R+DLR+ + +IDP D+DDAL L +G
Sbjct: 493 KAVLDCLPPEGHDWKVPADKEHVGWKGRRDLRDILVCSIDPPGCQDIDDALHARPLPNGN 552
Query: 309 SRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 368
VGVHIADVS+FV P A+D+EA R T+VY++ ++I MLP LL ++ SL P V+R A
Sbjct: 553 FEVGVHIADVSHFVKPNNAMDLEASARGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYA 612
Query: 369 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 428
FS+ W++ +VV ++VIRS SYE AQ ID S N
Sbjct: 613 FSVLWEMTPNAEVVSAEFTKSVIRSREAFSYEQAQKRIDDP----SQN------------ 656
Query: 429 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GRED 485
++ +S+++L +SKIL+ KR GAL L + + DE G P V +
Sbjct: 657 ---DELTQSMRTLLRLSKILRQKRMDAGALNLASPEVRIETDSDEVGDPLTDVKTKAMLA 713
Query: 486 LNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSS 544
N L EEFML AN T A I +F +ALLRRH P + E K L+LD SS
Sbjct: 714 TNSLVEEFMLHANITVAAKIYDSFSQTALLRRHATPPPQNFEELINQLSKKRNLELDVSS 773
Query: 545 SGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPV 603
S SL++ + + F+ L+ ATR M A YFC+G ++++ HY LA P+
Sbjct: 774 SRALADSLDRC---VDPENPFFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPI 829
Query: 604 YTHFTSPLRRYPDLVVHRTLNAAL 627
YTHFTSP+RRY DL+VHR L AA+
Sbjct: 830 YTHFTSPIRRYADLLVHRQLAAAI 853
>gi|379728870|ref|YP_005321066.1| ribonuclease R [Saprospira grandis str. Lewin]
gi|378574481|gb|AFC23482.1| ribonuclease R [Saprospira grandis str. Lewin]
Length = 986
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 177/528 (33%), Positives = 263/528 (49%), Gaps = 81/528 (15%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+P GRV+ I++R+ R+ +G L V++ F + +PD +
Sbjct: 165 KPEGRVIKILKRN--RETFIGTLVVSKRFCF---------------VIPDENTV------ 201
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNE--ESPFPQAHVLHVFGRG 232
M ++V + L EG + + V I EW + + P+ + V G+
Sbjct: 202 ----PMDIIVD------RNSLMEGQSD---DKVVVHITEWPKPNSNDNPKGVITTVLGKA 248
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G + ++ +IL + F E ++ +P E+P+ E+ R DLR FTIDP+TA
Sbjct: 249 GGNDIEMKSILIKQGFELD-FPEEVMAESEAIPLEIPESEIQKRLDLRQIPTFTIDPATA 307
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D DDALS+E L +G R+G+HIADV+Y+V G+ LD EA R+TSVY++ R +PMLP
Sbjct: 308 KDFDDALSVEMLDNGNYRIGIHIADVTYYVAKGSPLDKEAAKRTTSVYLVDRVLPMLPEK 367
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS V SL P D+L FS ++LN+ G VV+ W G+TVI S + +YE AQ+I+DG
Sbjct: 368 LSNGVCSLRPHEDKLTFSALFELNAKGHVVEEWFGKTVIHSDQRFAYEEAQEILDG---- 423
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
EG Y Q ++ L + IL+ RF GA+ E+ + F DE
Sbjct: 424 ------AEG---PYSQ--------ELRILNRYAHILRKARFKKGAISFESPEVRFKLDED 466
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA-----LLRRHPAPNMRKLR 527
G P D L R+D + L E+FMLLAN+ I + + + R H P+M K+
Sbjct: 467 GKPVDVYLKHRKDAHMLVEDFMLLANRRVGAKIMNIYRNGGKEIPFVYRIHDLPDMEKVN 526
Query: 528 EFEAFCSKHGLQLDTSS----SGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 583
F F ++ G +L +G F++ L+ A K + +L R M A+Y
Sbjct: 527 GFGKFAAQLGYRLKIQDVEQVAGAFNKMLKAAEGKPE-----HAVLHQLGIRTMSKAAYS 581
Query: 584 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
+ GHY L F Y+HFTSP+RRY D++VHR L L EK
Sbjct: 582 TQ-------NIGHYGLGFEDYSHFTSPIRRYADVLVHRNLQHFLMNEK 622
>gi|348555427|ref|XP_003463525.1| PREDICTED: DIS3-like exonuclease 1-like [Cavia porcellus]
Length = 1055
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 175/518 (33%), Positives = 275/518 (53%), Gaps = 38/518 (7%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++++ RD +V F + + +G K+A+K I +TP
Sbjct: 330 PTGRVVGILQKN-WRDYVVTFPSKEE-VQSQG---KNAQK------------ILVTPWDY 372
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK I+ ++ +A + ++ ID W S +P H + V GR G++
Sbjct: 373 RIPK-----------IRISTQQAEALQDFRVIV-HIDSWESTSLYPNGHFVRVLGRIGDL 420
Query: 236 EPQINAILYENAICCSGFSPESLSCLPC----VPWEV-PQEELLSRKDLRNFCIFTIDPS 290
E +I IL EN+I + FS L P PW+V +EE R R +F+IDP
Sbjct: 421 EGEIATILVENSISVTPFSEAQLCETPVNTPEKPWQVSAEEERRRRDLRRTHLVFSIDPK 480
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDALS+ LS+G +GVHIADV++FV + +D++A+ R+T+ Y+ R+ MLP
Sbjct: 481 GCEDVDDALSVRTLSNGDLELGVHIADVTHFVASNSYIDVKARTRATTYYLADRRYDMLP 540
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GVDR A S+ W L+ ++ W GRT+IRS KL YE AQ+++D
Sbjct: 541 SVLSADLCSLLGGVDRYAVSVMWQLDKTSYEIKTVWYGRTIIRSAYKLCYEAAQELLDRN 600
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F + + + Q ++ +I+ L ++++ ++ KR GAL LE +
Sbjct: 601 FGIVDEIPELKNLDEKSKQARLEELAGAIERLTDIARHVRAKRNRCGALELEGVEVRVQL 660
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ +D + +++ E M+LAN A+ I +FP ALLR+HP P+ E
Sbjct: 661 DDKNNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFAEL 720
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
+ G +DT S+ SL++A + D ++ +L + AT+ M A YF SG
Sbjct: 721 RKCAAAKGFTIDTRSNKALADSLDKAED--PTDPMVNRLLRSMATQAMSNALYFSSGSCA 778
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
++ ++ HY LA YTHFTSP+RRY D++VHR L AA+
Sbjct: 779 EE-EFHHYGLALGKYTHFTSPIRRYSDIIVHRLLMAAI 815
>gi|312131136|ref|YP_003998476.1| rnase r [Leadbetterella byssophila DSM 17132]
gi|311907682|gb|ADQ18123.1| RNAse R [Leadbetterella byssophila DSM 17132]
Length = 739
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 172/523 (32%), Positives = 254/523 (48%), Gaps = 70/523 (13%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
K P GR+V I+ R+ R+ +VG + V + NY +L PD
Sbjct: 130 KNPEGRIVEIVTRA--RNTVVGKIKV--FKNY-------------ALVSPD--------- 163
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
VK ++I ++ + +LV + + + V V G+ G
Sbjct: 164 ----------VKGFHENIFVPKDKINGATSDDLVIVELITYPQLGIQASGEVKAVLGKSG 213
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ ++NAI+ E + F L + +P+EE+ R+D+R+ FTIDP A
Sbjct: 214 DNNAEMNAIMAEFGLPVD-FPQAVLDQAAAISEAIPEEEIKKRRDVRDILTFTIDPFDAK 272
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D DDALS L +G VG+HIADVS++V PGT L+ EA R+TSVY++ R IPMLP L
Sbjct: 273 DFDDALSFRTLENGNYEVGIHIADVSHYVRPGTLLEEEALKRATSVYLVDRTIPMLPEKL 332
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL P D+L FS +++N +V+ W GR ++ S + +YE AQ+I+DGK D
Sbjct: 333 SNNLCSLRPHEDKLVFSAIFEMNDKAEVLKEWFGRCIMHSDRRFTYEEAQEILDGKEDET 392
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 473
S L +L ++ IL+D+RF GA E + F DE G
Sbjct: 393 YSPVL--------------------HTLNNMAHILRDERFKKGAFNFETDEVKFRLDEEG 432
Query: 474 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD-----SALLRRHPAPNMRKLRE 528
P R+D + L EEFMLLAN+ A + P + + R H PN KL
Sbjct: 433 KPLGIYQKVRKDAHKLIEEFMLLANRRVATFVHNKGPKDQEPYTMVYRVHEPPNPSKLET 492
Query: 529 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF 588
F F +K G + + S+ Q QSL + +++ + ++L + A R M A Y
Sbjct: 493 FVRFANKMGFSIKSGSTQQLSQSLNRLMTEIEGKPIQ-NVLESLAVRTMSKARYSTQ--- 548
Query: 589 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
+ GH+ LAF Y+HFTSP+RRYPD++ HR L L+ K
Sbjct: 549 ----NLGHFGLAFDHYSHFTSPIRRYPDIMAHRMLQHYLDGGK 587
>gi|440297048|gb|ELP89778.1| exosome complex exonuclease RRP44, putative [Entamoeba invadens
IP1]
Length = 914
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 190/603 (31%), Positives = 279/603 (46%), Gaps = 81/603 (13%)
Query: 81 STSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVN 140
S D T+ V NA+E PTG+VV +++R+
Sbjct: 300 SVVDVTQDVEEHTPTTDQNAME---------TEGNPTGKVVGVLKRN------------- 337
Query: 141 QWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA 200
W G +K+ N S+ + PT+ YP + + +D +RL
Sbjct: 338 -WKPVPGYIKKEIGGNYST-------NLLFLPTNKSYPPIRIKARDPARLASQRL----- 384
Query: 201 TIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSC 260
A ID+W+ S +P H + G G+ + AIL + I F L C
Sbjct: 385 -------LAVIDQWDTTSRYPTGHYVATLGNVGDRASETEAILELHDIPHYEFPETVLRC 437
Query: 261 LPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 320
LP +P+E+ E L R+D R + +IDP D+DDAL + L +G +GVHIADVS
Sbjct: 438 LPKLPFEITDEYLKGRRDFRRCNVCSIDPPGCKDIDDALHCKLLPNGHFEIGVHIADVSC 497
Query: 321 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGD 380
F+ P T +D EA+ R T+VY+ R+I MLP L+E V S+ D L FS+ W++++ G+
Sbjct: 498 FLKPNTTMDEEARKRGTTVYLADRRIDMLPKPLTEIVCSITEKTDTLTFSVVWEVDANGE 557
Query: 381 VVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKS 440
+++ + ++ S +Y AQ +ID K D SD + +++
Sbjct: 558 IINCEYTKGIVNSYKAFAYGVAQGVIDNKED-------------------QSDRAKELRA 598
Query: 441 LYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKT 500
L +SK LK KR GAL L +S+ DE P + N + EE+MLLAN
Sbjct: 599 LLMISKKLKQKRLEAGALVLASSEISIEKDEKYNPVGVKEYQTYETNSMVEEYMLLANVW 658
Query: 501 AAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 560
A+ I AFP ALLRRHP P+ G +LD SSS SL
Sbjct: 659 VAKKIYDAFPQCALLRRHPPPDEHAFEWLSNVMKTRGQKLDFSSSKALSDSLANCES--S 716
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
D V+ I+ TR MQ A YF SG F + ++ HY LA +YTHFTSP+RRY D++VH
Sbjct: 717 KDPVVGKIMRILVTRCMQQAKYFSSGYFPMN-EYRHYGLACDIYTHFTSPIRRYADVLVH 775
Query: 621 RTLNAALEAEKLYW--------------KHRRMLPKNNHREGVRGRFLTGIFYDKDAAES 666
R L A+ +++ +R + ++ RE + + T IFY KD
Sbjct: 776 RFLAMAIGFDRIELTITKESVKEIADNINYRHTMAQHAGRESI--QMYTLIFY-KDKEVE 832
Query: 667 LEG 669
++G
Sbjct: 833 VDG 835
>gi|296816335|ref|XP_002848504.1| mitotic control protein dis3 [Arthroderma otae CBS 113480]
gi|238838957|gb|EEQ28619.1| mitotic control protein dis3 [Arthroderma otae CBS 113480]
Length = 1044
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 181/530 (34%), Positives = 265/530 (50%), Gaps = 68/530 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT +VV II+R+ R+ VG ++ + R+ ++ + + P
Sbjct: 380 QPTAKVVGIIKRNWRQ--YVGHIDGSSSSQASSAGRR-------------QQTVFVIPMD 424
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK+ + + + + +R + ID W+ +S +P H + G
Sbjct: 425 KRVPKIRIRTRQANELMGQR------------ILITIDAWDRDSRYPMGHFVRSLGEVET 472
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCI 284
+G E E A+L E + F L CLP W+VP++ R+DLR+ +
Sbjct: 473 KGAETE----ALLLEYDVQYRPFPQTVLDCLPAEGHDWKVPKDMSDPGWKDRRDLRDLLV 528
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL L +G VGVHIADVS FV P A+D EA +R T+VY++ +
Sbjct: 529 CSIDPPGCQDIDDALHSRPLPNGNFEVGVHIADVSNFVRPNNAMDTEASMRGTTVYLVDK 588
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP+LL ++ SL P V+R AFS+ W++ + ++V ++VI S SYE AQ
Sbjct: 589 RIDMLPMLLGTDLCSLKPHVERFAFSVLWEVTADAEIVSSSFTKSVIFSREAFSYEQAQL 648
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
ID + + D+ S+++L +SK+L+ KR GAL L + +
Sbjct: 649 RIDDRSKTD-------------------DLTESMRTLLRLSKLLRQKRMDAGALNLASPE 689
Query: 465 PVFLFD-EYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
D E P V + D N L EEFMLLAN + A I +FP +ALLRRH P
Sbjct: 690 VRIETDSELSDPVADVKTKALLDTNSLVEEFMLLANISVAARIYESFPQTALLRRHATPP 749
Query: 523 MRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLA 580
E K L LD SSS SL++ + + F+ LI ATR M A
Sbjct: 750 PSNFEELITQLSKKRNLTLDVSSSLALANSLDKC---VDERNPFFNTLIRILATRCMTSA 806
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
YFC+G ++++ HY LA P+YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 807 EYFCAG-AHSESEFRHYGLASPIYTHFTSPIRRYADLVVHRQLAAAIGYE 855
>gi|326482722|gb|EGE06732.1| mitotic control protein dis3 [Trichophyton equinum CBS 127.97]
Length = 1044
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 187/564 (33%), Positives = 276/564 (48%), Gaps = 72/564 (12%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 142
++ E V + ++ + R + + +PT +VV II+R+ R+ VG ++ +
Sbjct: 348 AEENEAVVTERERKALQEEVRKAHGTGTESRPQPTAKVVGIIKRNWRQ--YVGHIDGSSS 405
Query: 143 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
R+ ++ + + P + PK+ + + + + +R
Sbjct: 406 SQASSAGRR-------------QQTVFVIPMDKRVPKIRIRTRQANELMGQR-------- 444
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 258
+ ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ----ILITIDAWDRDSRYPVGHFVRSLGEVETKGAETE----ALLLEYDVQYRPFPQTVL 496
Query: 259 SCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
CLP W+VP++ RKDLR+ + +IDP + D+DDAL L +G VG
Sbjct: 497 DCLPPEGHDWKVPKDMSDPGWKDRKDLRDLLVCSIDPPSCQDIDDALHSRPLPNGNFEVG 556
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVS FV P A+D EA +R T+VY++ ++I MLP+LL ++ SL P V+R AFS+
Sbjct: 557 VHIADVSNFVRPNNAMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVERYAFSVL 616
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W++ +VV ++VI S SYE AQ ID Q +
Sbjct: 617 WEITPDAEVVSSSFTKSVIFSREAFSYEQAQLRID-------------------DQSKTD 657
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRE----DLNF 488
D+ S+++L +SK+L+ KR GAL L + P + DSV + D N
Sbjct: 658 DLTTSMRTLLRLSKLLRQKRMDAGALNL--ASPEVRIETDSELSDSVADVKTKALLDTNS 715
Query: 489 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQ 547
L EEFMLLAN + A I +FP +ALLRRH P E K L LD SSS
Sbjct: 716 LVEEFMLLANISVAARIYESFPQTALLRRHATPPPSNFEELITQLSKKRNLTLDVSSSLA 775
Query: 548 FHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTH 606
SL++ + + F+ LI ATR M A YFC+G ++++ HY LA P+YTH
Sbjct: 776 LANSLDKC---VDERNPFFNTLIRILATRCMTSAEYFCAG-AHSESEFRHYGLASPIYTH 831
Query: 607 FTSPLRRYPDLVVHRTLNAALEAE 630
FTSP+RRY DLVVHR L AA+ E
Sbjct: 832 FTSPIRRYADLVVHRQLAAAIGYE 855
>gi|119591391|gb|EAW70985.1| hCG2043065 [Homo sapiens]
Length = 665
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 158/402 (39%), Positives = 220/402 (54%), Gaps = 40/402 (9%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDAPVTKDETTCISQDTRALSEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVH
Sbjct: 350 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+IRSC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 470 LTPEGKILDEWFGRTIIRSCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEV 525
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTP 475
+++ +L+ ++K L+ +RF DGALRL+ K F D E G P
Sbjct: 526 HQAVLNLHGIAKQLRQQRFVDGALRLDQLKLAFTLDHETGLP 567
>gi|339252888|ref|XP_003371667.1| exosome complex exonuclease RRP44 [Trichinella spiralis]
gi|316968045|gb|EFV52388.1| exosome complex exonuclease RRP44 [Trichinella spiralis]
Length = 785
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 201/588 (34%), Positives = 297/588 (50%), Gaps = 78/588 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTG+VV I R+ R I G L + A SS + TP+
Sbjct: 135 PTGKVVGIWRRACR--PICGVL-------------EPASSTISSQRL-------FTPSDR 172
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ P++++ + + + +R + A ID W S +P H + G+ G+
Sbjct: 173 RLPRVLLDLSETAHLVDQR------------IVATIDCWPISSRYPIGHFVRELGKIGDR 220
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
+ + A+L E+ + FS L CLP PW + +++L R+DLR+ I ++DP TD+
Sbjct: 221 QTENAALLLEHDVPNRCFSKSVLDCLPETPWTITEKDLQEREDLRHLTICSVDPPGCTDI 280
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDAL +L++G VGVHIADVS+FV+P +ALD EA R T+VY++ ++I MLP LLS
Sbjct: 281 DDALHCVQLANGNFEVGVHIADVSHFVIPNSALDQEAANRGTTVYLVDQRIDMLPDLLSS 340
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
++ SL DR AFS+ W+L+ +V+ +++IRS L+Y AQ +D
Sbjct: 341 KLCSLLAENDRFAFSVIWELDRNANVLKCRFCKSIIRSSMALTYADAQSRLDD------- 393
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGT 474
P + V ++++L +SK+LK +R GAL L +++ F D E
Sbjct: 394 -------PNMNDA-----VTVTLRNLNNLSKLLKKRRLERGALTLASTEVRFDVDSETSD 441
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + + N + EEFMLLAN T AE I FP ALLRRHP P + S
Sbjct: 442 PIEVQAKQMFETNSMVEEFMLLANITVAEKIYTEFPQVALLRRHPPPPVSSYEPVVKAAS 501
Query: 535 KHGLQLDTSSSGQ-FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTD 593
+ G +L G+ SL +A L+ + +L TR M A YFCSG +
Sbjct: 502 RLGFELIVDRGGKALADSLNKA--VLETNPYFNTMLRMLTTRCMTQAVYFCSGSVSKEL- 558
Query: 594 WGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL---YWKHRR--MLPKN-NHRE 647
+ H+ LA P+YTHFTSP+RRY DLVVHR L+AAL+ ++ RR +L +N N+R
Sbjct: 559 YLHFGLASPIYTHFTSPIRRYADLVVHRLLSAALDQSRIVPSMLDRRRLELLCQNLNYRH 618
Query: 648 GV---RGR----FLTGIFYDKDAAESLEG------REALSVAALKYGV 682
+ GR T +F+ K+ E LE R AL + KYG+
Sbjct: 619 RMAQYAGRASVSLNTHLFF-KNRLEQLEAYVLFVRRNALQLLIPKYGL 665
>gi|349605179|gb|AEQ00502.1| DIS3-like exonuclease 1-like protein, partial [Equus caballus]
Length = 646
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 276/549 (50%), Gaps = 57/549 (10%)
Query: 224 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDL 279
H + V GR G++E +I IL EN+I FS + +P PW+V E+ R+DL
Sbjct: 1 HFVRVLGRIGDLEAEIATILAENSISVVPFSEAQMCEMPVNTPENPWKVNPEDERERRDL 60
Query: 280 R-NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 338
R +F+IDP D+DD LS+ L +G +GVHIADV++FV P + +DIEA+ R+T+
Sbjct: 61 RKTHLVFSIDPKGCEDVDDTLSVRTLHNGNLELGVHIADVTHFVAPNSYIDIEARTRATT 120
Query: 339 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKL 397
Y+ R+ MLP +LS ++ SL GVDR A S+ W+L+ ++ W GRT+IRS KL
Sbjct: 121 YYLADRRYDMLPSVLSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKL 180
Query: 398 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 457
YE AQ+++DG + + + ++V +I L ++++ ++ KR GA
Sbjct: 181 FYEAAQELLDGNVSIVDDIPEFRNLDEKSREARLKELVWAIGKLTDIARHVRAKRDRCGA 240
Query: 458 LRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 517
L LE + DE +D + +++ E M+LAN A+ I +FP ALLR+
Sbjct: 241 LELEGVEVRVQLDEKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQ 300
Query: 518 HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPM 577
HP P+ E G +DT S+ SL++A + +D ++ +L + AT+ M
Sbjct: 301 HPPPHQEFFSELRECAKAKGFVIDTRSNKTLADSLDKAND--PNDPIVNRLLRSMATQAM 358
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
A YF +G ++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K
Sbjct: 359 SNALYFSTGSCAEE-EFHHYGLALDKYTHFTSPIRRYSDIIVHRLLMAAISKDK------ 411
Query: 638 RMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCND 697
+M K N +F +KD E + H N+
Sbjct: 412 KMEIKEN------------LFSNKDLEE-------------------------LCRHINN 434
Query: 698 RKLACRNVKDACVKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
R A ++ + +L+ + K K E +S+ + ++ + ++I + I+ Y
Sbjct: 435 RNRAAQHSQKQSTELFQCMYFKDKDPETEERCISDGVIYSIRTNGVLVFIPRFGIKGAAY 494
Query: 753 YDEVEGLIV 761
+GL++
Sbjct: 495 LKNKDGLVI 503
>gi|431796052|ref|YP_007222956.1| ribonuclease R [Echinicola vietnamensis DSM 17526]
gi|430786817|gb|AGA76946.1| ribonuclease R [Echinicola vietnamensis DSM 17526]
Length = 724
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 161/478 (33%), Positives = 250/478 (52%), Gaps = 36/478 (7%)
Query: 166 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 225
E++ P++ +V K + I R + + + V +I EW +E P V
Sbjct: 160 EFVGRVEISPRFAFVVSDFKKMHHDIFIRKSDLNGAEHNQKVVVKITEWRDEDKNPTGKV 219
Query: 226 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 285
L V G GE E +I++I+ E + + E + + ++ + ++ SRKD R F
Sbjct: 220 LQVLGEAGEHEVEIHSIMAEFGLPFE-YPDEIVQEAEAISDKISKSDIKSRKDFRGVTTF 278
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
TIDP+ A D DDA+S +RL +G +GVHIADV+++V P T L+ EA R+TSVY++ R
Sbjct: 279 TIDPADAKDFDDAISYQRLPNGNIEMGVHIADVTHYVKPNTPLEKEAYDRATSVYLVDRT 338
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 405
IPMLP LS + SL P D+L FS ++L+ G V+ WIGRT+I S + +YE AQ+
Sbjct: 339 IPMLPERLSNGLCSLRPHEDKLTFSCVFELDEDGQVLKHWIGRTIIHSDRRFAYEEAQEN 398
Query: 406 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKP 465
ID Q G F +S++ L ++K ++ +RF GA+ E +
Sbjct: 399 ID----------------QQEGDF-YSELT----LLNNLAKKIRKRRFQQGAINFETVEV 437
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI--ARAFPDSALLRRHPAPNM 523
F D+ GTP ++ R+D++ + EEFMLLANK AE + D+ + R H P++
Sbjct: 438 KFKLDDKGTPLGLMVKERKDIHKMIEEFMLLANKAVAEFVFNKNKGDDTFVYRIHDHPDL 497
Query: 524 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 583
+L F F K G ++ + + + +L + +++ ++L A R M A Y
Sbjct: 498 ERLETFANFAKKFGHEVSITEATRVSATLNKLMGEIEGKPEQ-NLLEQLAIRSMAKARYT 556
Query: 584 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE----AEKLYWKHR 637
GH+ LAF YTHFTSP+RRYPD++VHR L L+ A+K W+ +
Sbjct: 557 TEPK-------GHFGLAFKHYTHFTSPIRRYPDMMVHRLLQHYLDGGKSADKEAWEDK 607
>gi|212645896|ref|NP_501835.2| Protein DIS-3 [Caenorhabditis elegans]
gi|221222479|sp|Q17632.2|RRP44_CAEEL RecName: Full=Probable exosome complex exonuclease RRP44; AltName:
Full=Protein DIS3 homolog; AltName: Full=Ribosomal
RNA-processing protein 44
gi|189310666|emb|CAA94677.2| Protein DIS-3 [Caenorhabditis elegans]
Length = 961
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 235/444 (52%), Gaps = 27/444 (6%)
Query: 194 RLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 252
R+E A T+ + + ID W +S +P H + G G E + +L E+ I +
Sbjct: 393 RIETEQAETLSQQRIVVAIDHWPRDSKYPLGHYVRSIGEMGSRETENEVLLLEHDIPHAP 452
Query: 253 FSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 309
FS L CLP WE E L R DLR+ I ++DP TD+DDAL +++ + +
Sbjct: 453 FSESVLDCLPREEWEPDLTENRGPLPRVDLRDLTICSVDPLGCTDIDDALHCKQIGEDLF 512
Query: 310 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 369
VGVHIADV++FV PGTA+D EA +R T+VY+ R+I MLP LLS + SL +R AF
Sbjct: 513 EVGVHIADVTHFVRPGTAIDDEAALRGTTVYLCDRRIDMLPCLLSSNLCSLRGEEERYAF 572
Query: 370 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 429
S W + S+ D+ +++I+S L+YE AQ+IID P+
Sbjct: 573 SCIWTMTSSADIQSVKYHKSLIKSKAALTYEKAQEIIDD--------------PK----- 613
Query: 430 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNF 488
E +DV ++ L ++SK+L +R +GAL L +S+ F D E TP + D +
Sbjct: 614 EQNDVALGLRGLMKLSKVLNARRTGNGALTLASSEVRFDMDWESRTPKKVMEKQHLDTHS 673
Query: 489 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 548
+ EEFMLLAN + AE I +PD ALLRRHP P + G ++ S
Sbjct: 674 MVEEFMLLANISVAEKILEEYPDCALLRRHPVPLKESYKPLVEAARHRGFEIIVESGKGL 733
Query: 549 HQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 608
SL + + K + +L +L TR M A YF +G + H+ LA +YTHFT
Sbjct: 734 ADSLNRCVD--KKNPMLNRLLRMLTTRCMTQAVYFSAGTVP-VPQYQHFGLACAIYTHFT 790
Query: 609 SPLRRYPDLVVHRTLNAALEAEKL 632
SP+RRY D++VHR L AA+ A+ +
Sbjct: 791 SPIRRYADVIVHRLLAAAIGADDI 814
>gi|443896905|dbj|GAC74248.1| exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3
[Pseudozyma antarctica T-34]
Length = 1006
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 182/532 (34%), Positives = 265/532 (49%), Gaps = 65/532 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PTG+VV I+ R+ R V ++ N N S+LS + + TP
Sbjct: 389 QPTGKVVGIVRRNWR--SYVAHVDANSV-------------NSSALSSLGAQTVFATPVD 433
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
K P++ + + + + +++ LVA +D W S +P H + G+
Sbjct: 434 RKLPRIRIRTRQARELMGQKI----------LVA--LDAWRPVSRYPDGHFVRALGQAES 481
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLSRK-----DLRNFCIFTI 287
E + ++L E+ + FS L CLP W VP +++ R D+R+ I +I
Sbjct: 482 KEAEQESLLLEHDVPYRPFSKAILDCLPAEGDSWVVPPKDMTHRAWRDRVDMRDEIICSI 541
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP D+DDAL ++L +G + GVHIADVSYFV P +D EA R T+VY++ ++I
Sbjct: 542 DPPGCQDIDDALHAKQLPNGNIQAGVHIADVSYFVRPDNPMDAEAASRGTTVYLVDKRID 601
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 407
MLP LL + SL P V+RLAFS W++ ++V ++VI S +YE AQ
Sbjct: 602 MLPHLLGTNLCSLRPYVERLAFSAVWEMTPEAEIVSVRFHKSVIASKAAFTYEEAQ---- 657
Query: 408 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
+ D S N + +SI+ L ++K LK KR GAL L + +
Sbjct: 658 LRKDDASKNDA---------------ITKSIRLLNSLAKKLKQKRMDAGALNLASPEVRI 702
Query: 468 LFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPN 522
D E P D + N L EEFMLLAN + AE I FP +A+LRRH P N
Sbjct: 703 HLDSPESAGPIDVEQKEMRETNSLVEEFMLLANVSVAERIYEVFPMTAVLRRHMPPPRTN 762
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
L++ + G++LD SSSG SL++ + F+ L+ ATR M A
Sbjct: 763 FETLQDI--LLKRRGMELDVSSSGALAASLDKCVDPADG---TFNTLVRIMATRCMLSAE 817
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
YFCSG DT + HY LA +YTHFTSP+RRY D++ HR L A++ E L+
Sbjct: 818 YFCSGSVARDT-FSHYGLAAGMYTHFTSPIRRYADVLAHRQLAASINYEPLH 868
>gi|320041326|gb|EFW23259.1| exosome complex exonuclease [Coccidioides posadasii str. Silveira]
Length = 1044
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 188/533 (35%), Positives = 271/533 (50%), Gaps = 74/533 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGS-RKDAKKNRSSLSVPDREYIQLTPT 173
+PT RVV +I+R+ R+ VG N GGS +A R ++ + + P
Sbjct: 380 QPTARVVGVIKRNWRQ--YVG--------NIDGGSFSSEASSGRR------QQAVFVIPM 423
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG--- 230
+ PK+ + + + + +R + ID W+ +S +P H + G
Sbjct: 424 DKRVPKIKIRTRQASELLGQR------------ILITIDAWDRDSRYPTGHFVRSLGELE 471
Query: 231 -RGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQ--EELL--SRKDLRNFC 283
+G E E A+L E + FS L+CLP W+VP ++ L RKDLR+
Sbjct: 472 TKGAETE----ALLLEYDVQYRPFSQAVLNCLPPEGHSWKVPGNLDDPLWKDRKDLRDLL 527
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
+ +IDP D+DD L L +G VGVHIADVS+FV P A+DIEA +R T+VY++
Sbjct: 528 VCSIDPPGCQDIDDTLHSRPLPNGNFEVGVHIADVSHFVQPNNAMDIEASMRGTTVYLVD 587
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
++I MLP+LL ++ SL P V+R FS+ W++ ++V ++VI S SYE AQ
Sbjct: 588 KRIDMLPMLLGTDLCSLKPYVERFGFSVIWEMTPDAEIVSANFTKSVILSKEAFSYEQAQ 647
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
ID + + ++ +S+++L +SKIL+ KR GAL L +
Sbjct: 648 LRID-------------------DESKKDELTQSMRTLLRMSKILRQKRMDAGALNL--A 686
Query: 464 KPVFLFDEYGTPYDSVLSGRED----LNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 519
P + D V + N L EEFMLLAN T A I ++FP +ALLRRH
Sbjct: 687 SPEVRIETESELNDPVADVKTKALLATNSLVEEFMLLANITVASRIYQSFPQTALLRRHA 746
Query: 520 APNMRKLREFEAFCS-KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 577
P + + A S K GL LD SSS SL++ + F+ LI ATR M
Sbjct: 747 TPPPQNFEQLIAQLSKKRGLTLDVSSSLALANSLDKC---VDPSNPFFNTLIRILATRCM 803
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
A YFC+G ++++ HY LA +YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 804 TSAEYFCAGAHA-ESEFRHYGLASSIYTHFTSPIRRYADLVVHRQLAAAIGYE 855
>gi|423315862|ref|ZP_17293767.1| ribonuclease R [Bergeyella zoohelcum ATCC 43767]
gi|405585578|gb|EKB59402.1| ribonuclease R [Bergeyella zoohelcum ATCC 43767]
Length = 719
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 158/431 (36%), Positives = 227/431 (52%), Gaps = 37/431 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V RI +W S P+ V+ V G GE E +I++IL E + S F E +
Sbjct: 194 VVVRIVDWKPHSKNPEGKVVQVLGAPGEHETEIHSILAEYGLPYS-FPEEVEQEADAINR 252
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+ +EE+ R+D+R+ FTIDP A D DDALSI +L +G VGVHIADVS++V PGT
Sbjct: 253 NIDEEEVKKRRDMRDVLTFTIDPKDAKDFDDALSIRQLKNGNWEVGVHIADVSHYVTPGT 312
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TS+Y++ R +PMLP +LS +V SL P D+ FS ++LN +++ +W
Sbjct: 313 LLDEEAYSRATSIYLVDRVVPMLPEVLSNDVCSLRPNEDKYTFSAVFELNDKAEIIKQWF 372
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
GRTVI S + +YE AQ+ I+ G+G D+ I L +++K
Sbjct: 373 GRTVIHSDRRFTYEEAQERIE----------TGKG-----------DLAEEILVLDKLAK 411
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
IL++ R GA+ + S+ F DE P +D N L EEFMLLAN+ +E I+
Sbjct: 412 ILREDRVKKGAITFDRSEVRFHLDENNEPVGVYFKTSKDANHLIEEFMLLANRKVSEYIS 471
Query: 507 RAFPDSA-----LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
+ + R H P+ KL F + G +++ S+S + +S+ + +K
Sbjct: 472 INAKNEVTGLTFIYRVHDDPDPTKLEALRDFVATFGYKMNLSNSKKVAESMNNLLKSVKG 531
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTD-WGHYALAFPVYTHFTSPLRRYPDLVVH 620
+++ A R M A Y TD GHY L F YTHFTSP+RRYPDL+ H
Sbjct: 532 KGEE-NMIETLAMRSMSKAVY--------STDPIGHYGLGFAYYTHFTSPIRRYPDLIAH 582
Query: 621 RTLNAALEAEK 631
R L L+ K
Sbjct: 583 RLLQHYLDKGK 593
>gi|388855912|emb|CCF50487.1| probable DIS3 3`-5` exoribonuclease required for 3` end formation
of 5.8S rRNA [Ustilago hordei]
Length = 1022
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 265/536 (49%), Gaps = 61/536 (11%)
Query: 109 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 168
SS +PTG+VV I+ R+ R V ++VN N S+LS + +
Sbjct: 383 SSRGEPQPTGKVVGIVRRNWR--SYVAHVDVNSV-------------NSSALSSLGAQTV 427
Query: 169 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
TP K P++ + + D + +++ L+A +D W S +P H +
Sbjct: 428 FATPVDRKLPRIRIRTRQAKDLMGQKI----------LIA--LDSWRPTSRYPDGHFVRA 475
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLSRK-----DLRN 281
G+ + + ++L E+ + FS L CLP W VP +++ R D+R
Sbjct: 476 LGQAESKQAEQESLLLEHDVPYRPFSKAILDCLPPEGDSWVVPPKDMTHRAWKDRIDMRE 535
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL ++L +G GVHIADVSYFV P +D EA R T+VY+
Sbjct: 536 EMICSIDPPGCQDIDDALHAKQLPNGNIEAGVHIADVSYFVRPDNPMDAEAASRGTTVYL 595
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ ++I MLP LL + SL P V+RLAFS W++ ++V+ ++VI S +YE
Sbjct: 596 VDKRIDMLPHLLGTNLCSLRPDVERLAFSAVWEMTPDAEIVNVRFHKSVIASKAAFTYEE 655
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ D K ++ + SI+ L ++ LK KR GAL L
Sbjct: 656 AQFRKDDKSKKDA-------------------ITESIRLLNSLAIKLKQKRMDAGALNLA 696
Query: 462 NSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHP 519
+ + D E P + + N L EEFMLLAN + A+ I FP +A+LRRH
Sbjct: 697 SPEVRIHLDSPEQAGPIEVEQKEMRETNSLVEEFMLLANVSVAQRIYEVFPMTAVLRRHL 756
Query: 520 APNMRKLREFEAFCSK-HGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 577
AP + K ++LD SSSG SL++ + KD F+ L+ ATR M
Sbjct: 757 APPRTNFENLQDILQKRRRMELDVSSSGALAASLDKCVDP-KDPP--FNTLVRIMATRCM 813
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
A YFCSG DT +GHY LA +YTHFTSP+RRY D++ HR L AA+ E L+
Sbjct: 814 LAAEYFCSGSVARDT-FGHYGLAAGMYTHFTSPIRRYADVLAHRQLAAAINYEPLH 868
>gi|154340243|ref|XP_001566078.1| putative ribonuclease II-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063397|emb|CAM39576.1| putative ribonuclease II-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 929
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 234/775 (30%), Positives = 370/775 (47%), Gaps = 109/775 (14%)
Query: 1 MKGFSNNSSIVEDSNLPTE---------ANGMHSDICKGKSKVDVSYEYSNCTLLSEKGI 51
+ ++ N S V S LP + +HSD+ + ++ + + +
Sbjct: 33 FRNYTTNLSFVRSSRLPCDVVLNSAELRGPALHSDVVAVELLPLTQWQLVPNAVSTASDL 92
Query: 52 HHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMN---AIERLSAMI 108
D++S+A + +G H + + E ++ QN A++ +
Sbjct: 93 ---GDNASDAKTDSGLRAMPSTLPDGRHIAQLIAPETTAAILQNASAEVSLAVQMGAPSS 149
Query: 109 SSYPT-KRPTGRVVSIIERS-PRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 166
+P+ KRP GRV+ I+ER PR V + NQ +G + +
Sbjct: 150 YEWPSEKRPLGRVIRILERHLPRLH--VARIADNQVQPGQG--------------LRESY 193
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
Y + P + YP++ V D+ + A I M L + + + + +
Sbjct: 194 YYRFRPFNQLYPQLAVQGCDI-------MAPYHANIGMSLFSLALQQGEKGD-------V 239
Query: 227 HVFGRGGEV----------EPQINAILYENAICCS------GFSPESLSCLPCVPWEVPQ 270
H R G V + A+ + +AIC S FS E+ +C+ + +P
Sbjct: 240 HTAPRMGNVLLCKVHSFLGDASTMAVAH-HAICTSCNVPNEPFSEEAEACV-AKDFTIPS 297
Query: 271 EELLS---RKDLR-NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
L+ R+DLR + + TIDP+TA DLDDALSI+ DG VGVHIADVSYFVLP T
Sbjct: 298 AAELADMGRRDLRESEFVLTIDPATARDLDDALSIKPRKDGGYHVGVHIADVSYFVLPRT 357
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD--- 383
ALD EAQ RS S Y++ R IPMLP LSE+ SLNPG D+ AFS ++ + G ++
Sbjct: 358 ALDEEAQRRSNSTYLVDRVIPMLPSRLSEQYCSLNPGEDKFAFSGLFEFDRDGHLISEAE 417
Query: 384 -----RWIGRTVIRSCCKLSYEHAQDIIDG---KFDV-ESSNTLGEGWPQLYGQFEWSDV 434
W G++VIRS C+L+YE AQ I+D + DV +++ LG + + + V
Sbjct: 418 TGEKCEWFGQSVIRSRCRLAYEQAQKILDNDPVELDVAQAAFDLG-----ISEEAARNKV 472
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGRE-DLNFLFE 491
+SIK+L++++ L+++ DG + + N + F F+ E +P S ++ N+L E
Sbjct: 473 KQSIKNLFKLASKLREQSLRDGRVVIGNIRLGFHFEKNEVNSPPVSFSVHQQIQANWLVE 532
Query: 492 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 551
EFMLLAN+ A+ I + P+ ALLRRH PN RK+ S GL SS + +
Sbjct: 533 EFMLLANQRVAQKIVQFIPNGALLRRHKPPNPRKMDLLREALSSRGLPTCGSSGQELQRM 592
Query: 552 LEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 611
L+ + + D+ L+ Y+ +A+ + + D + H+A+A P YTHFTSP+
Sbjct: 593 LDIMMKDHQGDFYTVCELVKYSL----MAAEYIANDPTEKDIRSHFAVAAPWYTHFTSPI 648
Query: 612 RRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAE--SLEG 669
RRY DL+VHR L ALE E+ + + +P+ H V R IF + +L+
Sbjct: 649 RRYCDLMVHRQLLVALELEQRIEEAQLAMPRAPHL-AVERRPEDDIFDPTRVVDVSTLKT 707
Query: 670 REALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVK----LYMWILLKK 720
RE P ++ L N+ H N+ +L R+ D ++ LY+ L K+
Sbjct: 708 RELF--------YPHSE-LQNIVAHANECRLNSRSAGDMSLEYSLCLYLLALQKR 753
>gi|302413990|ref|XP_003004827.1| mitotic control protein dis3 [Verticillium albo-atrum VaMs.102]
gi|261355896|gb|EEY18324.1| mitotic control protein dis3 [Verticillium albo-atrum VaMs.102]
Length = 752
Score = 258 bits (660), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 184/528 (34%), Positives = 257/528 (48%), Gaps = 59/528 (11%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT +VV +I+R+ W Y G + ++S +E + L P
Sbjct: 143 QPTAKVVGVIKRN--------------WRQYVGHI-DPSSTSQSGTQGRRQENVFLIPMD 187
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
PK+ + + + + KRL ID W +S P H + G
Sbjct: 188 KCIPKIRIRTRQAAELLGKRL------------VVTIDGWERDSRHPVGHFVRSLGELET 235
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDLRNFCIFTID 288
+ + A+L E + F L CLP VP + R+DLR+ I +ID
Sbjct: 236 KQAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWRVPTSLDDPGWRDREDLRSLLICSID 295
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P D+DDAL L +G VGVHIADVS FV P TA+D EA +R TSVY++ ++I M
Sbjct: 296 PIGCQDIDDALHARSLPNGNYEVGVHIADVSNFVKPLTAMDNEASIRGTSVYLVDKRIDM 355
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP+LL ++ SLNP ++R AFS+ W+LN D+V+ ++VI+S LSYE AQ +D
Sbjct: 356 LPMLLGTDLCSLNPYIERFAFSVIWELNENADIVNVRFTKSVIKSREALSYEQAQLRVD- 414
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVF 467
++S T D+ + I+ L ++S+ LK KR GAL L + + V
Sbjct: 415 ----DASQT--------------DDLTQGIRMLMKLSRKLKQKRMDAGALSLSSPEVKVQ 456
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
+ E P D D L EEFML AN + A I AFP +A+LRRH AP
Sbjct: 457 MESETSDPIDVKTKELLDTMSLVEEFMLFANVSVAAKIYEAFPQTAILRRHGAPPKTNFD 516
Query: 528 EF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCS 585
E K GL+L SS SL+ + + F+ L+ ATR M A YFCS
Sbjct: 517 ELANQLKVKKGLELRVDSSKALADSLDTC---VDPENPFFNTLVRIMATRCMMSAEYFCS 573
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
G D ++ HY LA +YTHFTSP+RRY DL HR L AA+ E ++
Sbjct: 574 GTQTYD-EFRHYGLASEIYTHFTSPIRRYADLQAHRQLAAAIGYEAVH 620
>gi|385304885|gb|EIF48887.1| exosome complex exonuclease rrp44 [Dekkera bruxellensis AWRI1499]
Length = 568
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 170/443 (38%), Positives = 239/443 (53%), Gaps = 38/443 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV-- 264
+ +D W+E S FPQ H + G + + + AIL E+ I FS L CLP
Sbjct: 23 IVVAVDSWSESSKFPQGHYVRTLGDIEDKDAEEEAILLEHDIEYRPFSKNVLDCLPKEGH 82
Query: 265 PWEVPQ-----EELLS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADV 318
W+VP+ ++LL+ R+DLR+ I +IDP D+DDAL ++L +G VGVHIADV
Sbjct: 83 NWKVPENLNNGDQLLAKREDLRDRLICSIDPPGCVDIDDALHAKKLXNGNYEVGVHIADV 142
Query: 319 SYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSA 378
++FV PGTA+D EA R T+VY++ ++I MLP LL ++ SL VDR AFS+ W++N
Sbjct: 143 THFVKPGTAIDQEAASRGTTVYLVDKRIDMLPSLLGTDLCSLMANVDRYAFSVIWEMNDK 202
Query: 379 GDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSI 438
++ + +++IRS SYE AQ +D D E + L + +
Sbjct: 203 AEIQNVKFTKSIIRSRHAFSYEEAQMRMD---DQEKQDPLTQ----------------DL 243
Query: 439 KSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 497
+ L +SKILK KR GAL L + + V + E P + + + N L EEFML A
Sbjct: 244 RILLRLSKILKKKRLDAGALNLASPEVRVHMDSETSDPSEVEVKQLLEANSLVEEFMLAA 303
Query: 498 NKTAAEVIARAFPDSALLRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 554
N + A I FP A+LRRH PA N L + + G+ L SS SL++
Sbjct: 304 NISVARKIYETFPQVAMLRRHATPPATNFEALNDM--LRVRKGMSLSVESSKALADSLDR 361
Query: 555 AREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
+ KD Y F+ L+ ATR M A YF +G F ++ HY LA +YTHFTSP+RR
Sbjct: 362 CVDP-KDPY--FNTLVRILATRCMTAAEYFTAGSFS-YPEFHHYGLAVDIYTHFTSPIRR 417
Query: 614 YPDLVVHRTLNAALEAEKLYWKH 636
Y D +VHR L+AA+ E L H
Sbjct: 418 YCDDIVHRQLSAAINYETLSKLH 440
>gi|371775901|ref|ZP_09482223.1| ribonuclease R [Anaerophaga sp. HS1]
Length = 720
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 178/576 (30%), Positives = 268/576 (46%), Gaps = 81/576 (14%)
Query: 65 EMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSII 124
EM +R G YI P D V+ S +N + P ++ G VV +I
Sbjct: 89 EMTQR-GAAYIV---PDEGDEDIFVAQSNLGHALNGDRVKVLRYARKPGRQAEGEVVEVI 144
Query: 125 ERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLV 184
ER+ RD VG L V++ F + D++ + +P
Sbjct: 145 ERN--RDHFVGILQVSKGFAFLVA---DSRVMHHDIFIP--------------------- 178
Query: 185 KDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILY 244
L++ + + +I EW +++ P V+ V G GE +++AIL
Sbjct: 179 ----------LDQLNGGKNGQKAVVQITEWPDKAKNPIGKVVDVLGEPGENNAEMHAILA 228
Query: 245 ENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERL 304
E + + ++ + +P E+ R+D R FTIDP A D DDALS+ +L
Sbjct: 229 EFNLPYK-YPENVVAAANKIKASIPNSEIKKRRDFRGVTTFTIDPVDAKDFDDALSVRKL 287
Query: 305 SDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGV 364
+G+ VGVHIADV+Y+V P + ++ EA R+TSVY++ R +PMLP LS E+ SL P
Sbjct: 288 DNGLWEVGVHIADVTYYVNPNSIIEKEAAKRATSVYLVDRVVPMLPERLSNELCSLRPDE 347
Query: 365 DRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQ 424
D+L FS+ + ++ ++D W+GRT+IRS + +YE AQ +I+ LG
Sbjct: 348 DKLCFSVVFQIDDNAKIIDSWVGRTIIRSIRRFTYEEAQQVIE--------TGLG----- 394
Query: 425 LYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRE 484
D ++ L +++K L+ +RF+ G++ E + F D+ G P +
Sbjct: 395 --------DCKMELEVLNDLAKKLRAERFSKGSVDFERVEVKFELDDDGKPLSVTFKEPK 446
Query: 485 DLNFLFEEFMLLANKTAAEVIARAFPDSA-----------LLRRHPAPNMRKLREFEAFC 533
D N L EEFMLLANK AE+I + D A + R H P+ K F F
Sbjct: 447 DANKLIEEFMLLANKRVAEIIGKNELDKAPSHHNKTAKTFVYRIHDEPDPEKFETFSRFV 506
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTD 593
K GL+ SL + +K++ +I+ A R M A Y +
Sbjct: 507 RKFGLEAKPKGQETISHSLNRLLDKVQGQKHQ-NIVETLAIRTMSKAVYSTH-------N 558
Query: 594 WGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
GHY L F YTHFTSP+RRYPD++VHR L LE
Sbjct: 559 IGHYGLGFKYYTHFTSPIRRYPDMMVHRLLQRYLEG 594
>gi|366998023|ref|XP_003683748.1| hypothetical protein TPHA_0A02320 [Tetrapisispora phaffii CBS 4417]
gi|357522043|emb|CCE61314.1| hypothetical protein TPHA_0A02320 [Tetrapisispora phaffii CBS 4417]
Length = 1015
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 190/561 (33%), Positives = 277/561 (49%), Gaps = 78/561 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PT +VV+I RS R+ VG + N GG++
Sbjct: 402 PTAKVVAITRRSWRQ--YVGQIAPNSVDKQVGGTQN------------------------ 435
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
V+L+ I+ R + + +V + +D W + +P H + G
Sbjct: 436 ---VFVILMDKCLPKIRIRTRRANELLNKRIVIS-VDSWPADHKYPLGHFVRDLGDVESS 491
Query: 236 EPQINAILYENAICCSGFSPESLSCLP------CVPWEV--PQEE-----LLSRKDLRNF 282
E + A+L E+ + FS + L CLP P + PQE+ L +R+DLR+
Sbjct: 492 EAETEALLLEHDVEYRPFSRKVLDCLPEEGHNWKAPTNINDPQEQAKDPLLKNRQDLRDK 551
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
I +IDP D+DDAL +RL +G VGVHIADV++FV PGTALD E R TSVY++
Sbjct: 552 LICSIDPPGCVDIDDALHAKRLPNGNWEVGVHIADVTHFVKPGTALDAEGASRGTSVYLV 611
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
++I MLP+LL ++ SL P VDR AFS+ W+L+ +++D ++VIRS SYE A
Sbjct: 612 DKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDNAEIIDVKFTKSVIRSREAFSYEQA 671
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
Q ID K + ++ + +++L E+S LK KR GAL L +
Sbjct: 672 QLRIDDKNQTD-------------------ELTKGMRALLELSVKLKQKRLDAGALNLAS 712
Query: 463 SK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
+ V + E P + + N L EEFMLLAN + A I AFP +A+LRRH +P
Sbjct: 713 PEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIFDAFPQTAMLRRHASP 772
Query: 522 ---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPM 577
N L E + L + SS SL++ + KD Y F+ LI +TR M
Sbjct: 773 PSTNFAILNEM--LQKRKNLSISLESSKALADSLDRCIDP-KDPY--FNTLIRIMSTRCM 827
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
A YF SG ++ +D+ HY LA +YTHFTSP+RR+ D++ HR L A+ E L HR
Sbjct: 828 MAAQYFYSGAYQ-YSDFRHYGLAVDIYTHFTSPIRRFCDVIAHRQLAGAIGYEPLALMHR 886
Query: 638 -----RMLPKNNHREGVRGRF 653
M+ KN +++ +F
Sbjct: 887 DKNKMEMICKNINKKHRNAQF 907
>gi|328770432|gb|EGF80474.1| hypothetical protein BATDEDRAFT_30067 [Batrachochytrium
dendrobatidis JAM81]
Length = 942
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 271/556 (48%), Gaps = 54/556 (9%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 142
+D T + + + + + +L A T +PT RVV II+R+ W
Sbjct: 301 ADDTNQAVAVKTDSMILENNKLLASTEPESTAKPTARVVGIIKRN--------------W 346
Query: 143 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
+ G + + + + + PK+ + + + KR
Sbjct: 347 RPFCGTIESTTVQTAAESINTQMQSVFFWALDKRIPKIRIRTRQAQHLVGKR-------- 398
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP 262
+ +D W + S +P H + G G+ + +L E+ + + FSP L LP
Sbjct: 399 ----IVVAMDSWAKNSRYPSGHYVRTLGDVGDRATETEVLLLEHDVPYAPFSPLVLRFLP 454
Query: 263 --CVPWEVPQEELLS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 319
W V EE L R+D R + + +IDP TD+DDAL ++L +G VGVHIADVS
Sbjct: 455 EEGESWVVRDEEHLEGREDFRTWDVCSIDPPGCTDIDDALHAKQLPNGNYSVGVHIADVS 514
Query: 320 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 379
+FV P A+D+EA+ R T+VY++ ++I MLP LL + SL VDRLAFS W+++
Sbjct: 515 HFVKPDNAMDLEARRRGTTVYLVDKRIDMLPSLLGTNLCSLRSNVDRLAFSCLWEMSPLA 574
Query: 380 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 439
+V+ ++VIRS L+Y+ AQ +D DV+ ++ + G I+
Sbjct: 575 EVISVRFTKSVIRSKASLTYDEAQARLD---DVKMTDPVSTG----------------IR 615
Query: 440 SLYEVSKILKDKRFTDGALRLENSKPVF-LFDEYGTPYDSVLSGREDLNFLFEEFMLLAN 498
L ++K L+ KR GAL L + + F + ++ P D L +D N L EEFMLLAN
Sbjct: 616 ILNSLAKQLRAKRMAAGALTLASPEVRFKMQNDSQDPVDVELKELKDTNALVEEFMLLAN 675
Query: 499 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
A I +FP+ ++LRRHP P + ++LD ++S SL++A
Sbjct: 676 IYVARKIYDSFPECSMLRRHPKPPATNFEDLAKALEPLNIELDPTTSKTLGDSLDKAVVP 735
Query: 559 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
D Y F+ L+ TR M A YFCSG W HY L+ +YTHFTSP+RRY DL
Sbjct: 736 -TDPY--FNQLVRIMTTRCMMQAVYFCSGTVAQPDFW-HYGLSTDIYTHFTSPIRRYADL 791
Query: 618 VVHRTLNAALEAEKLY 633
VVHR L A + +K Y
Sbjct: 792 VVHRLLAACIGYDKTY 807
>gi|346320999|gb|EGX90599.1| mitotic control protein dis3 [Cordyceps militaris CM01]
Length = 985
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 188/534 (35%), Positives = 261/534 (48%), Gaps = 59/534 (11%)
Query: 109 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 168
SS +PT +VV II+R+ R+ VG ++ + RK + +
Sbjct: 370 SSESQAQPTAKVVGIIKRNWRQ--YVGHIDPSSASKGPSQGRK-------------LDSV 414
Query: 169 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
L P K PK+ + + + + + KRL LV ID W+ +S P H +
Sbjct: 415 FLIPMDKKIPKIRLRTRQVAELLGKRL----------LVT--IDAWDRDSRHPVGHFVRS 462
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNF 282
G + A+L E + F L CLP W+VP R+DLR+
Sbjct: 463 LGELETKAAETEALLLEWDVQYRPFPKTVLDCLPTEGHDWQVPASTDDPGWRDREDLRDL 522
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
I +IDP D+DDAL +L +G VGVHIADVS+FV P A+D EA VR T+VY++
Sbjct: 523 LICSIDPVGCQDIDDALHARKLPNGNYEVGVHIADVSHFVKPANAMDSEASVRGTTVYLV 582
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
++I MLP LL + SL P V+R AFS+ W+L D+V ++VI+S SYE A
Sbjct: 583 DKRIDMLPPLLGTNLCSLKPYVERYAFSVLWELTDNADIVSARFTKSVIKSREAFSYEQA 642
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
Q ID D + L +G +++L +S+ LK KR GAL L +
Sbjct: 643 QLRID---DAAQQDELTQG----------------MRALLALSRRLKKKRMDAGALSLSS 683
Query: 463 SK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
+ V + E P D D N L EEFML AN + A I AFP +A+LRRH AP
Sbjct: 684 PEVKVQMESETSDPIDVKTKELLDTNSLVEEFMLFANISVAAKIYEAFPQTAILRRHAAP 743
Query: 522 NMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQL 579
+ E K GL L T +S SL+ + + F+ L+ ATR M
Sbjct: 744 PKTNFDDLAEQLRVKRGLALRTDTSKALADSLDACVDPAEP---FFNTLVRIMATRCMMS 800
Query: 580 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
A YFCSG + ++ HY LA +YTHFTSP+RRY DL+ HR L AA+ E ++
Sbjct: 801 AEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLLAHRQLAAAIGYEAVH 853
>gi|406672651|ref|ZP_11079876.1| ribonuclease R [Bergeyella zoohelcum CCUG 30536]
gi|405587195|gb|EKB60923.1| ribonuclease R [Bergeyella zoohelcum CCUG 30536]
Length = 719
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 157/431 (36%), Positives = 227/431 (52%), Gaps = 37/431 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V RI +W S P+ V+ V G GE E +I++IL E + S F E +
Sbjct: 194 VVVRIVDWKPHSKNPEGKVVQVLGAPGEHETEIHSILAEYGLPYS-FPEEVEQEADAINR 252
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+ +EE+ R+D+R+ FTIDP A D DDALSI +L +G +GVHIADVS++V PGT
Sbjct: 253 NIDEEEVKKRRDMRDVLTFTIDPKDAKDFDDALSIRQLKNGNWEIGVHIADVSHYVTPGT 312
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TS+Y++ R +PMLP +LS +V SL P D+ FS ++LN +++ +W
Sbjct: 313 LLDEEAYSRATSIYLVDRVVPMLPEVLSNDVCSLRPNEDKYTFSAVFELNDKAEIIKQWF 372
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
GRTVI S + +YE AQ+ I+ G+G D+ I L +++K
Sbjct: 373 GRTVIHSDRRFTYEEAQERIE----------TGKG-----------DLAEEILVLDKLAK 411
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
IL++ R GA+ + S+ F DE P +D N L EEFMLLAN+ +E I+
Sbjct: 412 ILREDRVKKGAITFDRSEVRFHLDENNEPVGVYFKTSKDANHLIEEFMLLANRKVSEYIS 471
Query: 507 RAFPDSA-----LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
+ + R H P+ KL F + G +++ S+S + +S+ + +K
Sbjct: 472 INAKNEVTGLTFIYRVHDDPDPTKLEALRDFVATFGYKMNLSNSKKVAESMNNLLKSVKG 531
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTD-WGHYALAFPVYTHFTSPLRRYPDLVVH 620
+++ A R M A Y TD GHY L F YTHFTSP+RRYPDL+ H
Sbjct: 532 KGEE-NMIETLAMRSMSKAVY--------STDPIGHYGLGFAYYTHFTSPIRRYPDLIAH 582
Query: 621 RTLNAALEAEK 631
R L L+ K
Sbjct: 583 RLLQHYLDKGK 593
>gi|326475168|gb|EGD99177.1| exosome complex exonuclease exoribonuclease [Trichophyton tonsurans
CBS 112818]
Length = 1044
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 187/562 (33%), Positives = 275/562 (48%), Gaps = 68/562 (12%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 142
++ E V + ++ + R + + +PT +VV II+R+ R+ VG ++ +
Sbjct: 348 AEENEAVVTERERKALQEEVRKAHGTGTESRPQPTAKVVGIIKRNWRQ--YVGHIDGSSS 405
Query: 143 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
R+ ++ + + P + PK+ + + + + +R
Sbjct: 406 SQASSAGRR-------------QQTVFVIPMDKRVPKIRIRTRQANELMGQR-------- 444
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 258
+ ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ----ILITIDAWDRDSRYPVGHFVRSLGEVETKGAETE----ALLLEYDVQYRPFPQTVL 496
Query: 259 SCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
CLP W+VP++ RKDLR+ + +IDP D+DDAL L +G VG
Sbjct: 497 DCLPPEGHDWKVPKDMSDPGWKDRKDLRDLLVCSIDPPGCQDIDDALHSRPLPNGNFEVG 556
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVS FV P A+D EA +R T+VY++ ++I MLP+LL ++ SL P V+R AFS+
Sbjct: 557 VHIADVSNFVRPNNAMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVERYAFSVL 616
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W++ +VV ++VI S SYE AQ ID Q +
Sbjct: 617 WEITPDAEVVSSSFTKSVIFSREAFSYEQAQLRID-------------------DQSKTD 657
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLF 490
D+ S+++L +SK+L+ KR GAL L + + D E P V + D N L
Sbjct: 658 DLTTSMRTLLRLSKLLRQKRMDAGALNLASPEVRIETDSELSDPVADVKTKALLDTNSLV 717
Query: 491 EEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFH 549
EEFMLLAN + A I +FP +ALLRRH P E K L LD SSS
Sbjct: 718 EEFMLLANISVAARIYESFPQTALLRRHATPPPSNFEELITQLSKKRNLTLDVSSSLALA 777
Query: 550 QSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 608
SL++ + + F+ LI ATR M A YFC+G ++++ HY LA P+YTHFT
Sbjct: 778 NSLDKC---VDERNPFFNTLIRILATRCMTSAEYFCAG-AHSESEFRHYGLASPIYTHFT 833
Query: 609 SPLRRYPDLVVHRTLNAALEAE 630
SP+RRY DLVVHR L AA+ E
Sbjct: 834 SPIRRYADLVVHRQLAAAIGYE 855
>gi|341884100|gb|EGT40035.1| hypothetical protein CAEBREN_08001 [Caenorhabditis brenneri]
Length = 956
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 163/446 (36%), Positives = 236/446 (52%), Gaps = 27/446 (6%)
Query: 191 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 250
I+ E+ + + +V A ID W +S +P H + G G E + +L E+ I
Sbjct: 389 IRIETEQAEILSQQRIVVA-IDHWPRDSKYPLGHYVRSIGEMGSRETENEVLLLEHDIPH 447
Query: 251 SGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDG 307
+ FS L CLP WE E L R DLR+ I ++DP TD+DDAL +++ D
Sbjct: 448 APFSEAVLDCLPREEWEPDLSENRGPLPRVDLRHLTICSVDPLGCTDIDDALHCKQIGDD 507
Query: 308 ISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRL 367
+ VGVHIADV++FV PGTA+D EA +R T+VY+ R+I MLP LLS + SL +R
Sbjct: 508 LFEVGVHIADVTHFVRPGTAIDDEAALRGTTVYLCDRRIDMLPCLLSSNLCSLRGEEERY 567
Query: 368 AFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYG 427
AFS W + S+ D+ +++I+S L+YE AQ+IID P+
Sbjct: 568 AFSCIWTMTSSADIQSVKYHKSLIKSKAALTYEKAQEIIDD--------------PK--- 610
Query: 428 QFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDL 486
E DV + ++ L ++SK+L +R +GAL L +S+ F D E TP + D
Sbjct: 611 --ETDDVAQGLRGLMKLSKVLNARRTGNGALTLASSEVRFDMDWESRTPKKVMEKQHLDT 668
Query: 487 NFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSG 546
+ + EEFMLLAN + AE I + +PD ALLRRHP P + G ++ S
Sbjct: 669 HSMVEEFMLLANISVAEKILQEYPDCALLRRHPVPLKESYKPLIEAARHRGFEIIVESGK 728
Query: 547 QFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTH 606
SL + + + +L +L TR M A YF +G + H+ LA +YTH
Sbjct: 729 GLADSLNRCVD--TKNPMLNRLLRMLTTRCMTQAVYFSAGTVP-VPQYQHFGLACAIYTH 785
Query: 607 FTSPLRRYPDLVVHRTLNAALEAEKL 632
FTSP+RRY D++VHR L AA+ A+ +
Sbjct: 786 FTSPIRRYADVIVHRLLAAAIGADDI 811
>gi|238503894|ref|XP_002383179.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Aspergillus flavus NRRL3357]
gi|220690650|gb|EED46999.1| exosome complex exonuclease exoribonuclease (Rrp44), putative
[Aspergillus flavus NRRL3357]
Length = 1032
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 276/563 (49%), Gaps = 69/563 (12%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 142
++ E V + ++ + R + S+ +PT +VV +I+R+ W
Sbjct: 348 AEDNEAVVTERERKALQEEVRQAHGKSTEGRPQPTAKVVGVIKRN--------------W 393
Query: 143 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
Y G + +++S S ++ + + P + PK+ V + + + +R
Sbjct: 394 RQYVGHVDSGSTGSQAS-SGRRQQNVFVLPMDKRVPKIRVRTRQASELLGQR-------- 444
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 258
+ ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ----ILVTIDAWDRDSRYPTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPQAVL 496
Query: 259 SCLPCV--PWEVP--QEEL--LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
CLP W VP +E++ R+DLR+ I +IDP D+DDAL L +G VG
Sbjct: 497 DCLPAEGHDWRVPASKEDIGWKGRRDLRDLLICSIDPPGCQDIDDALHARPLPNGNFEVG 556
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVS+FV P A+D+EA +R T+VY++ ++I MLP LL ++ SL P V+R AFS+
Sbjct: 557 VHIADVSHFVKPNNAMDLEASLRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVL 616
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W++ +VV ++VIRS SYE AQ ID D + L E
Sbjct: 617 WEMTPNAEVVSTDFTKSVIRSREAFSYEQAQMRID---DPSKKDELTE------------ 661
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFL 489
S+++L SKIL+ KR GAL L + + DE G P V + N L
Sbjct: 662 ----SMRTLLRFSKILRQKRMDAGALNLASPEVRIEADNDEVGDPLTDVKTKAMLATNSL 717
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQF 548
EEFML AN T A I F +A+LRRH P + E K ++LD SSS
Sbjct: 718 VEEFMLHANITVAAKIYSTFSQTAMLRRHATPPPQNFEELINQLSKKRDMRLDVSSSHAL 777
Query: 549 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 607
SL+Q + F+ L+ ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 778 ADSLDQC---VDSKNPFFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHF 833
Query: 608 TSPLRRYPDLVVHRTLNAALEAE 630
TSP+RRY DL+VHR L +A+ E
Sbjct: 834 TSPIRRYADLLVHRQLASAIGYE 856
>gi|169764839|ref|XP_001816891.1| exosome complex exonuclease DIS3 [Aspergillus oryzae RIB40]
gi|83764745|dbj|BAE54889.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391863230|gb|EIT72541.1| exosomal 3'-5' exoribonuclease complex, subunit Rrp44/Dis3
[Aspergillus oryzae 3.042]
Length = 1032
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 188/563 (33%), Positives = 276/563 (49%), Gaps = 69/563 (12%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 142
++ E V + ++ + R + S+ +PT +VV +I+R+ W
Sbjct: 348 AEDNEAVVTERERKALQEEVRQAHGKSTEGRPQPTAKVVGVIKRN--------------W 393
Query: 143 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
Y G + +++S S ++ + + P + PK+ V + + + +R
Sbjct: 394 RQYVGHVDSGSTGSQAS-SGRRQQNVFVLPMDKRVPKIRVRTRQASELLGQR-------- 444
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 258
+ ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ----ILVTIDAWDRDSRYPTGHFIRSLGELETKGAETE----ALLLEYDVQYKPFPQAVL 496
Query: 259 SCLPCV--PWEVP--QEEL--LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
CLP W VP +E++ R+DLR+ I +IDP D+DDAL L +G VG
Sbjct: 497 DCLPAEGHDWRVPASKEDIGWKGRRDLRDLLICSIDPPGCQDIDDALHARPLPNGNFEVG 556
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVS+FV P A+D+EA +R T+VY++ ++I MLP LL ++ SL P V+R AFS+
Sbjct: 557 VHIADVSHFVKPNNAMDLEASLRGTTVYLVDKRIDMLPHLLGTDLCSLKPYVERYAFSVL 616
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W++ +VV ++VIRS SYE AQ ID D + L E
Sbjct: 617 WEMTPNAEVVSTDFTKSVIRSREAFSYEQAQMRID---DPSKKDELTE------------ 661
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF--DEYGTPYDSVLS-GREDLNFL 489
S+++L SKIL+ KR GAL L + + DE G P V + N L
Sbjct: 662 ----SMRTLLRFSKILRQKRMDAGALNLASPEVRIEADNDEVGDPLTDVKTKAMLATNSL 717
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQF 548
EEFML AN T A I F +A+LRRH P + E K ++LD SSS
Sbjct: 718 VEEFMLHANITVAAKIYSTFSQTAMLRRHATPPPQNFEELINQLSKKRDMRLDVSSSRAL 777
Query: 549 HQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 607
SL+Q + F+ L+ ATR M A YFC+G ++++ HY LA P+YTHF
Sbjct: 778 ADSLDQC---VDSKNPFFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASPIYTHF 833
Query: 608 TSPLRRYPDLVVHRTLNAALEAE 630
TSP+RRY DL+VHR L +A+ E
Sbjct: 834 TSPIRRYADLLVHRQLASAIGYE 856
>gi|390595687|gb|EIN05091.1| RNB-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 982
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 191/551 (34%), Positives = 265/551 (48%), Gaps = 73/551 (13%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVPDREYIQLT 171
K+PTGRVV +I+R+ W Y S + N +SLS ++ + T
Sbjct: 363 KQPTGRVVGVIKRN--------------WRAYVCHIDSTSLSSLNATSLS---QQTVFAT 405
Query: 172 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
P P++ + + P I ++ + ID W S +P+ H + GR
Sbjct: 406 PVSRLLPRIRMRTRQAPTLIGQK------------ILVTIDRWEPTSRYPEGHFVRALGR 453
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE-----ELLSRKDLRNFCI 284
E + ++L E + F L CLP W VP + E R+DLR+ I
Sbjct: 454 VESKEAEQESLLLEYEVPYRPFGKAILDCLPVEGDKWVVPTKSDTSPEWRDREDLRDMII 513
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL L +G GVHIADVS+FV T +D EA R T+VY++ +
Sbjct: 514 CSIDPPGCQDIDDALHARLLPNGNIEAGVHIADVSHFVHADTPMDNEAAARGTTVYLVDK 573
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP LL + SL P V+RLAFS W+L +V ++VI S +Y+ AQ
Sbjct: 574 RIDMLPSLLGTNLCSLRPYVERLAFSCIWELTPNAQIVKVRFTKSVIASKAAFTYKEAQ- 632
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
+ + P L ++ +SI+ L ++ LK R GAL L + +
Sbjct: 633 -------------MRKDDPNLN-----DELTKSIRLLNSLALKLKAGRMAAGALNLASPE 674
Query: 465 PVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---P 519
D E P D + N L EEFMLLAN + A+ I FP +A+LRRH P
Sbjct: 675 VKIHMDSAESSDPIDVEQKEMLETNSLVEEFMLLANISVAQKIQETFPQTAVLRRHLPPP 734
Query: 520 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 578
N KL++ + GL LD SSSG +SL+Q L F+ L+ ATR M
Sbjct: 735 RTNFEKLQDI--LQKRKGLTLDVSSSGALAKSLDQC---LDPKEPAFNTLVRIMATRCML 789
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRR 638
A YF SG DT +GHY LA P+YTHFTSP+RRY D++VHR L+AA+ YW
Sbjct: 790 SAEYFNSGSVARDT-FGHYGLASPIYTHFTSPIRRYADVLVHRQLSAAIS----YWPLHP 844
Query: 639 MLPKNNHREGV 649
L +H E V
Sbjct: 845 SLHSKSHVERV 855
>gi|449671731|ref|XP_004207554.1| PREDICTED: exosome complex exonuclease RRP44-like [Hydra
magnipapillata]
Length = 953
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 158/429 (36%), Positives = 226/429 (52%), Gaps = 23/429 (5%)
Query: 202 IEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCL 261
++ + + ID W S +P H + G G + +L E+ + FS L L
Sbjct: 385 LQQKKIIVSIDCWPRNSRYPLGHYVRDLGESGNKATEKEVLLLEHDVPHQPFSQHVLDDL 444
Query: 262 PCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYF 321
P +PW + +++ L+R DLR I +IDP TD+DDAL L +G GVHIADVS F
Sbjct: 445 PKLPWCITEQDYLARHDLRELNICSIDPPGCTDIDDALHWRPLENGNFECGVHIADVSLF 504
Query: 322 VLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV 381
V PGT LD +A+ R T+VY++ ++I M+P LLS ++ SL+ +R AFS W++ ++
Sbjct: 505 VKPGTHLDEKAKQRGTTVYLVDQRIDMIPELLSSDLCSLHEKEERFAFSCIWEMTPDAEI 564
Query: 382 VDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSL 441
V+ ++VI S L+Y AQ IID V+ + S+++L
Sbjct: 565 VNVNFVKSVICSKAALTYAEAQMIIDDNTRVDP-------------------IAISVRNL 605
Query: 442 YEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKT 500
E++K LK KR GAL L + + F D E P D D N L EEFMLLAN +
Sbjct: 606 NELAKKLKAKRIEFGALTLASPEVRFHIDSETHDPIDMQKKELRDTNSLVEEFMLLANIS 665
Query: 501 AAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 560
A+ + FP ++LR+HP P+ + + +D SS SL+ A +
Sbjct: 666 VAKKLYEHFPQHSVLRKHPTPSAAMFETLIKSAASLNVPIDISSGKSLQNSLDAAV--FE 723
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
DD +L +TR M A YFCSG K +D+ HY LA P+YTHFTSP+RRYPD++VH
Sbjct: 724 DDPYKNIMLRILSTRSMTQALYFCSGTEK-FSDYQHYGLATPIYTHFTSPIRRYPDIMVH 782
Query: 621 RTLNAALEA 629
R L A A
Sbjct: 783 RLLGVACGA 791
>gi|50303069|ref|XP_451472.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640603|emb|CAH03060.1| KLLA0A10835p [Kluyveromyces lactis]
Length = 1008
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 192/557 (34%), Positives = 271/557 (48%), Gaps = 84/557 (15%)
Query: 105 SAMISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP 163
SA+++ K +PT RVV I RS W Y G
Sbjct: 384 SAILAQKSNKVQPTARVVGITRRS--------------WRQYVG---------------- 413
Query: 164 DREYIQLTPTH--PKYPK----MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEE 217
Q+TPT P+ V+L+ I+ R + +V + +D W E
Sbjct: 414 -----QITPTSVDPQSSGTQNVFVILMDKCLPKIRIRTRLAKQLLNKRIVIS-VDCWPEN 467
Query: 218 SPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE--- 272
+P H + G + + A+L E+ + FS + L CLP W+ P++
Sbjct: 468 YRYPLGHFVRDLGDIESAQAETEALLLEHDVEYRPFSKKVLDCLPKEGHDWKAPEDLTDP 527
Query: 273 --------LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
L SRKD R+ I +IDP D+DDAL ++L +G VGVHIADV++FV P
Sbjct: 528 EAIRNDPLLPSRKDFRDKLICSIDPPGCVDIDDALHAKQLPNGNWEVGVHIADVTHFVKP 587
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
GTALD E R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+L++ ++V
Sbjct: 588 GTALDAEGASRGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVVWELDNDANIVGV 647
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 444
++VIRS SYE AQ+ ID + + TLG +++L ++
Sbjct: 648 DFTKSVIRSREAFSYEKAQNRIDDE-TAKDELTLG------------------MRALLQL 688
Query: 445 SKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
SK LK KR GAL L + + V + E P + + D N L EEFMLLAN + A
Sbjct: 689 SKKLKQKRLDAGALNLASPEVKVHMDSETSDPNEVEIKKLLDTNSLVEEFMLLANISVAR 748
Query: 504 VIARAFPDSALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 560
I AFP +A+LRRH AP N L E + G+ + SS SL++ +
Sbjct: 749 KIYEAFPQTAMLRRHAAPPSTNFELLNEM--LQVRKGMSISLESSKALADSLDRCED--P 804
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
+D L ++ +TR M A YF +G F D+ HY LA +YTHFTSP+RRY D+V H
Sbjct: 805 NDSYLNTLIRIMSTRCMMAAQYFHAGAFS-YADFRHYGLAVDIYTHFTSPIRRYCDVVAH 863
Query: 621 RTLNAALEAEKLYWKHR 637
R L A+ E L HR
Sbjct: 864 RQLAGAIGYEALDLSHR 880
>gi|193213033|ref|YP_001998986.1| ribonuclease R [Chlorobaculum parvum NCIB 8327]
gi|193086510|gb|ACF11786.1| ribonuclease R [Chlorobaculum parvum NCIB 8327]
Length = 798
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 188/544 (34%), Positives = 273/544 (50%), Gaps = 84/544 (15%)
Query: 112 PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLT 171
P +R G +V+++ R + IVG L ++NR L PD+ I
Sbjct: 201 PHQRCEGLIVNVVSR--KLTTIVGTLQ---------------RENRRFLLKPDQRKI--- 240
Query: 172 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
P++ + VKD K+ ++G + +L E+ + QA V+ + G+
Sbjct: 241 -----LPEIHISVKD-----AKKAKDGAKVLAGDL------EFLKNGTI-QARVIEILGQ 283
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 291
GE + +++AI I + F E L+ V E+ E+L R D+R+ +FTIDP
Sbjct: 284 AGESQVEVSAIARGLGIDET-FEQELLTFAEKVREEITDEDLKERLDIRDKDVFTIDPVD 342
Query: 292 ATDLDDALSIERLSDGIS-RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
A D DDALSIE+L +G +VGVHIADVS++V +ALD EA+ R+TSVY++ R IPMLP
Sbjct: 343 AKDFDDALSIEKLGNGGGYKVGVHIADVSHYVPENSALDKEARKRATSVYLVDRVIPMLP 402
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 410
LSE+V SLNPGVDR+AFS+F+++ G+V +TVI S + +YE Q IID
Sbjct: 403 SRLSEKVCSLNPGVDRMAFSVFFNITKKGEVKKFEFHKTVIHSKRRFTYEDVQQIIDA-- 460
Query: 411 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 470
G+G D V +++L +SK ++ +R G L E + F
Sbjct: 461 --------GKG-----------DYVEELQALESLSKTIRAQRMESGGLEFETEEVRFKLG 501
Query: 471 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALLRRHPAPNMR 524
G P + + R D + L EEFMLLAN+T A + + P + R H AP M
Sbjct: 502 SNGEPVEVIKKERLDSHRLIEEFMLLANRTVAAYLTARYAENEKNPHPVIYRVHGAPQME 561
Query: 525 KLREFEAFCSKHGLQLDTSSSGQ-----FHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 578
+++ F K G L G+ ++L + +K+ V F L+N R M
Sbjct: 562 RVQVLANFVRKIGFDLKLDRKGKDSATVSSRALRELLQKVHGTNVEF--LVNELVLRSMS 619
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRR 638
A Y S D GH+ L F YTHFTSP+RRYPDLV+HR L E E K R+
Sbjct: 620 KAVYMSSND-------GHFGLGFEHYTHFTSPIRRYPDLVIHRIL---FEYETTRKKRRK 669
Query: 639 MLPK 642
+ P+
Sbjct: 670 VTPE 673
>gi|358331641|dbj|GAA50418.1| DIS3-like exonuclease 2 [Clonorchis sinensis]
Length = 1909
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 204/702 (29%), Positives = 328/702 (46%), Gaps = 114/702 (16%)
Query: 117 TGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNR-------SSLSVPDRE--- 166
TG+VV II R R +G+L + + G +KD +S SV ++
Sbjct: 249 TGKVVGIINRLHSR-ACIGYLTLPK---STGTPKKDKTAQAVTEADTATSTSVSSKDVAN 304
Query: 167 -------YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 219
+ +L T + P +++ + P + ++ + ARI W E S
Sbjct: 305 TSTNCWSHARLIQTDTRLPHLLIPRQVCPQAFIS----DPSSFKHVRYVARITSWPESSL 360
Query: 220 FPQAHVLHVFGRGGE--VEPQINAILYENAICCSGFSP--ESLSCLPCVPWEVPQEE--- 272
FP +L VE + + IL +GF ES+ P E +EE
Sbjct: 361 FPTGELLRSLSTDSAKLVEAETDRILV-----VAGFYSGLESIHRFPDEVEESAKEEVYR 415
Query: 273 --------LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD-------------GISRV 311
L R D R C+FTIDPSTA DLDDAL I LSD V
Sbjct: 416 ANSAFLDELCWRTDFRPLCVFTIDPSTARDLDDALHIRSLSDKEIDELAQDGCPGATYEV 475
Query: 312 GVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSI 371
GVHIADVSYFV P + LD+E+ R+T++Y++Q +PMLP +L EE+ SLN G D+ FS+
Sbjct: 476 GVHIADVSYFVRPNSPLDMESARRATTIYLVQLCVPMLPRILCEELCSLNVGEDKRTFSV 535
Query: 372 FWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEW 431
+ ++ G+++ GR+VIRSC KLSYE+AQ + G+ + F
Sbjct: 536 VFKVDKYGNILRSSFGRSVIRSCAKLSYENAQSV---------------GF--CFAAFSP 578
Query: 432 SDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDE-YGTPYDSVLSGREDLNFLF 490
+ ++ S L++++ + +RF+ G+LRL+ K F+ D+ P + + N+L
Sbjct: 579 AIII-SYFVLFQLAMQRRQRRFSGGSLRLDQIKTAFVLDDDKQIPLGVAPAICKPSNWLV 637
Query: 491 EEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQ 550
EE+ML AN++ AE +A+ P++A LRRH P++ +L + G+ ++T ++G
Sbjct: 638 EEWMLAANESVAERLAKELPETAFLRRHAPPSLNQLSKAADSLKSVGINVNTETAG---- 693
Query: 551 SLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSP 610
S+++ + +L+ + + + ++ T+ M LA YFC G+ + HYAL YTHFTSP
Sbjct: 694 SIQERKAQLEQEARML-VAVSLLTKTMNLAEYFCLGELPKECTTEHYALNMEFYTHFTSP 752
Query: 611 LRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGR 670
+RRY D++VHR L A L E D L
Sbjct: 753 IRRYADVIVHRQLAAILAREA----------------------------QNDGNAELANW 784
Query: 671 EALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARV 730
A +V P + L A CN +KL R + +L+ + +K+ L V
Sbjct: 785 YAQTVCTPG---PSSKQLQTQAEVCNSKKLCARRAGEESAELFYVLFVKESGPLTEVCAV 841
Query: 731 LALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLVL 772
++ R + + + RR+Y +V + +++ ++T+ L
Sbjct: 842 TSVLNRSFDVMLLSCGLTRRVYL-QVCDICAIFIDLSNTISL 882
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 202/707 (28%), Positives = 319/707 (45%), Gaps = 111/707 (15%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
P G+V+S+ +R+PRR ++G ++ +F G + D P
Sbjct: 1121 PVGQVLSVAKRNPRRRRLLGQIS---FFRPSSGRITRDTVPLDQDAPVDDAICLFIPNSG 1177
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+P + ++ +P+++ + G + + I WN P + G E+
Sbjct: 1178 SHPSVKIVPGGIPEAVLRNRALGLSPNYV----CEITGWNRRLNLPYGVISEQLGGMDEL 1233
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVP--WEVPQEELLSRKDLRNFCIFTIDPSTAT 293
E IL E + F PE L LP P + +P +E L R+D R+ C+ +IDP++A
Sbjct: 1234 ELATKQILIEYGLEDKDFLPEHLEGLPKDPDDFRIPSKEYLKRRDFRSCCVLSIDPASAK 1293
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL I + + + VG+HIADVSYFV PGTALD EA R+TSVY++QR IPMLP +L
Sbjct: 1294 DIDDALHIRPIDNDLFEVGIHIADVSYFVKPGTALDREAADRTTSVYLVQRVIPMLPAIL 1353
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA---QDIIDGKF 410
S + SL PG DRLAFS+ + ++G++VD W GRT+IRS KLSY+ A + +D
Sbjct: 1354 SSHLCSLQPGADRLAFSVVMKIRTSGEIVDVWFGRTIIRSRTKLSYDEALALMETVDLDS 1413
Query: 411 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-----P 465
+ E L + P+ F+ DV ++ +L ++++ L+ +R GAL L+ +K P
Sbjct: 1414 NSEKVKQLHKVIPKPEAPFKLEDVRDALTNLNKIARNLRKQRLQQGALTLQKAKIEFDLP 1473
Query: 466 VFLFDEYGTPYDSV----------------------LSGREDLNFLFEEFMLLANKTAAE 503
FD P+D + + + L EE+ML AN+ A
Sbjct: 1474 SSTFDP--GPFDPIDPSNSAETSSTLDRTRWPRGYSVRSPGPSHQLIEEWMLAANQAVAR 1531
Query: 504 VIARAFPD--------------------SALLRRHPAPNMRKLREFEAF------CSKHG 537
+ +AF ALLRRH P + L+E C
Sbjct: 1532 RLFQAFVQHVSSCSKPTVIDQFRQDVWPGALLRRHEEPTKKNLKELVLLRHLIIGCIPAD 1591
Query: 538 LQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK-------- 589
+ + + L +A ++ + D L + M++A+YF D
Sbjct: 1592 VTKCCQALYDHSRKLIEAGHSEEERTAIMDALSHLVYVRMKMATYFSLDDLTLINPEVLQ 1651
Query: 590 ---DDTD------WGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRML 640
+ D W HY L+ P+YTHFTSP+RRY DL+VHR L+A L +
Sbjct: 1652 SIPTNVDQLFEHTW-HYGLSVPLYTHFTSPIRRYADLLVHRQLSAILHESE--------- 1701
Query: 641 PKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKL 700
+ R+ V + I + +ES + L AL+ A CN R++
Sbjct: 1702 ---HQRDPVSQ--MGRIRKSRRLSESGRTNQPLPQLALQ------------AQWCNSRRM 1744
Query: 701 ACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAI 747
R ++A +L++ L+ LL + VL + + + + I
Sbjct: 1745 LSRRAQEASQRLFLTACLRDCGPLLMDGTVLDFNASSIKVLLSEFGI 1791
>gi|327302334|ref|XP_003235859.1| exosome complex exonuclease exoribonuclease [Trichophyton rubrum
CBS 118892]
gi|326461201|gb|EGD86654.1| exosome complex exonuclease exoribonuclease [Trichophyton rubrum
CBS 118892]
Length = 1044
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 185/559 (33%), Positives = 274/559 (49%), Gaps = 68/559 (12%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 142
++ E V + ++ + R + + +PT +VV II+R+ R+ VG ++ +
Sbjct: 348 AEENEAVVTERERKALQEEVRKAHGTGTESRPQPTAKVVGIIKRNWRQ--YVGHIDGSSS 405
Query: 143 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
R+ ++ + + P + PK+ + + + + +R
Sbjct: 406 SQASSAGRR-------------QQTVFVIPMDKRVPKIRIRTRQANELMGQR-------- 444
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESL 258
+ ID W+ +S +P H + G +G E E A+L E + F L
Sbjct: 445 ----ILVTIDAWDRDSRYPVGHFVRSLGEVETKGAETE----ALLLEYDVQYRPFPQTVL 496
Query: 259 SCLPCV--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
CLP W+VP++ RKDLR+ + +IDP D+DDAL L +G VG
Sbjct: 497 DCLPPEGHDWKVPKDMSDPGWKDRKDLRDLLVCSIDPPGCQDIDDALHSRPLPNGNFEVG 556
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVS FV P A+D EA +R T+VY++ ++I MLP+LL ++ SL P V+R AFS+
Sbjct: 557 VHIADVSNFVRPNNAMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVERYAFSVL 616
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W++ +VV ++VI S SYE AQ ID Q +
Sbjct: 617 WEITPEAEVVSSSFTKSVIFSREAFSYEQAQLRID-------------------DQSKTD 657
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLF 490
D+ S+++L +SK+L+ KR GAL L + + D E P V + D N L
Sbjct: 658 DLTASMRTLLRLSKLLRQKRMEAGALNLASPEVRIETDSELSDPVADVKTKALLDTNSLV 717
Query: 491 EEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFH 549
EEFMLLAN + A I ++P +ALLRRH P E K L LD SSS
Sbjct: 718 EEFMLLANISVAARIYESYPQTALLRRHATPPPSNFEELITQLSKKRSLTLDVSSSLALA 777
Query: 550 QSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 608
SL++ + + F+ LI ATR M A YFC+G ++++ HY LA P+YTHFT
Sbjct: 778 NSLDKC---IDERNPFFNTLIRILATRCMTSAEYFCAG-AHSESEFRHYGLASPIYTHFT 833
Query: 609 SPLRRYPDLVVHRTLNAAL 627
SP+RRY DLVVHR L AA+
Sbjct: 834 SPIRRYADLVVHRQLAAAI 852
>gi|332019034|gb|EGI59568.1| Exosome complex exonuclease RRP44 [Acromyrmex echinatior]
Length = 976
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 200/609 (32%), Positives = 297/609 (48%), Gaps = 84/609 (13%)
Query: 109 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA-KKNRSSLSVPDREY 167
S K PTG++V II R +W Y G + A K N L VP
Sbjct: 328 SKMQEKIPTGKIVGIIRR--------------KWRQYCGILQPSAIKTNVRHLFVP---- 369
Query: 168 IQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI-EMELVAARIDEWNEESPFPQAHVL 226
K PK+ R+E A I + + +D W S +P H +
Sbjct: 370 -----AERKIPKI-------------RIETRQAEILSKQRIIVALDSWPRNSRYPLGHFV 411
Query: 227 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 286
G G+ E + +L E+ + S FS LS LP +PW + + ++ R+DLR I +
Sbjct: 412 RALGNIGDKETENEVLLLEHDVPHSRFSDAVLSFLPKLPWIITETDVAQREDLRYLDICS 471
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
+DP TD+DDAL LS+G VGVHIADVS+F+ PGTALD EA +R+T+VY++ ++I
Sbjct: 472 VDPPGCTDIDDALHCRSLSNGNFDVGVHIADVSHFIRPGTALDKEAALRATTVYLVDKRI 531
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
M+P LLS + SL +R AFS W+++S ++++ +++I S ++YE AQ I
Sbjct: 532 DMVPELLSSNLCSLRGKEERFAFSCIWEIDSDANIINMRFCKSIICSRQAMTYEEAQLKI 591
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
D ++ + +S++ L +++K LK KR +GAL L + +
Sbjct: 592 DDATQQDA-------------------IAKSLRGLNQLAKKLKKKRLENGALTLASPEIR 632
Query: 467 FLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
F D E P D D N + EEFMLLAN + AE I FP+ A+LRRHP P
Sbjct: 633 FQVDSETHDPIDVEAKKLRDTNSMVEEFMLLANISVAEKILAEFPECAMLRRHPEPPQSN 692
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFC 584
G ++TS+ +F +SLE+ K+ F+ ++ ATR M A YF
Sbjct: 693 FEPLIKAAKNQGFIINTSTGKEFARSLEETH---KESNPYFNTMLKILATRCMLQAVYFI 749
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRR-YPDLVVHRTLNAALEAEKLY------WKHR 637
SG + + ++ HY LA +YTHFTSP+RR Y D++VHR L + A+ Y K+
Sbjct: 750 SGMHQPE-EFKHYGLACSIYTHFTSPIRRQYADIIVHRLLAVCIGADATYPELLDKKKNH 808
Query: 638 RMLPKNNHREGV---RGR----FLTGIFYDKDAAESLEG------REALSVAALKYGVPC 684
+ N+R + GR T IF+ ++ + EG + AL V KYG+
Sbjct: 809 SLCHNLNYRNRMAQYAGRASVALHTHIFF-RNKIQDEEGYILFVRKNALQVLIPKYGLEG 867
Query: 685 ADILVNVAT 693
L N A+
Sbjct: 868 TLYLNNSAS 876
>gi|392587639|gb|EIW76973.1| RNB-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 997
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 187/546 (34%), Positives = 264/546 (48%), Gaps = 69/546 (12%)
Query: 103 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA--KKNRSSL 160
R+SA K+PTGR+V +++R+ W Y + + N +SL
Sbjct: 365 RVSAEEKKAAEKQPTGRIVGVVKRN--------------WRAYVCHIDRTSLTSSNATSL 410
Query: 161 SVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPF 220
S ++ + TP P++ + + P T+ + + ID W+ S +
Sbjct: 411 S---QQTVFATPVSRLLPRIRIRTRQAP------------TLLGQKIIVSIDRWDPSSRY 455
Query: 221 PQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVP-----QEEL 273
P+ H + G E + ++L E + F L CLP W VP E
Sbjct: 456 PEGHFVRALGHSESKEAEQESLLLEFDVPYRPFGRAILDCLPKEGEQWVVPPMSASSEVW 515
Query: 274 LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 333
+R DLR+ + +IDP D+DDAL RL++G GVHIADVS+FV T +D EA
Sbjct: 516 RNRTDLRHLNVCSIDPPGCQDIDDALHARRLTNGNIEAGVHIADVSHFVHADTPMDTEAA 575
Query: 334 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 393
R T+VY++ ++I MLP LL + SL P V+RLAFS W+L D+V+ ++VI S
Sbjct: 576 ARGTTVYLVDKRIDMLPSLLGTNLCSLRPHVERLAFSAIWELTPEADIVNVRFTKSVIAS 635
Query: 394 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 453
Y AQ D D ++ L E SI+ L +++ K KR
Sbjct: 636 KAAFEYGEAQIRKD---DPNRTDELTE----------------SIRLLNTLAEKFKAKRM 676
Query: 454 TDGALRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 511
GAL L + + D E P D + N L EEFMLLAN + A+ I AFP
Sbjct: 677 QAGALNLASPEVKIHLDSPESSDPIDVEQKALHETNSLVEEFMLLANISVAKRIQEAFPQ 736
Query: 512 SALLRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDI 568
+A+LRRH P N KL++ + GL LD SSSG SL+ + KD F+
Sbjct: 737 TAVLRRHMPPPKTNFEKLQDI--LMKRKGLTLDVSSSGALADSLDHCIDP-KD--ATFNT 791
Query: 569 LIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
L+ ATR M A YF SG DT + HY LA P+YTHFTSP+RRY D++ HR L AA+
Sbjct: 792 LVRIMATRCMLSAEYFSSGSVARDT-FAHYGLATPIYTHFTSPIRRYADVLAHRQLAAAI 850
Query: 628 EAEKLY 633
+ L+
Sbjct: 851 DYAPLH 856
>gi|302659667|ref|XP_003021521.1| hypothetical protein TRV_04368 [Trichophyton verrucosum HKI 0517]
gi|291185424|gb|EFE40903.1| hypothetical protein TRV_04368 [Trichophyton verrucosum HKI 0517]
Length = 1044
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 184/530 (34%), Positives = 264/530 (49%), Gaps = 68/530 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT +VV II+R+ R+ VG ++ + R+ ++ + + P
Sbjct: 380 QPTAKVVGIIKRNWRQ--YVGHIDGSSSSQASSAGRR-------------QQTVFVIPMD 424
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK+ + + + + +R + ID W+ +S +P H + G
Sbjct: 425 KRVPKIRIRTRQANELMGQR------------ILITIDAWDRDSRYPVGHFVRSLGEVET 472
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCI 284
+G E E A+L E + F L CLP W+VP++ RKDLR+ +
Sbjct: 473 KGAETE----ALLLEYDVQYRPFPQTVLDCLPPEGHDWKVPKDMSDPGWNDRKDLRDLLV 528
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL L +G VGVHIADVS FV P A+D EA +R T+VY++ +
Sbjct: 529 CSIDPPGCQDIDDALHSRPLPNGNFEVGVHIADVSNFVRPNNAMDTEASMRGTTVYLVDK 588
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP+LL ++ SL P V+R AFS+ W++ +VV ++VI S SYE AQ
Sbjct: 589 RIDMLPMLLGTDLCSLKPHVERYAFSVLWEITPDAEVVSSSFTKSVIFSREAFSYEQAQL 648
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
ID Q + D+ S+++L +SK+L+ KR GAL L + +
Sbjct: 649 RID-------------------DQSKTDDLTASMRTLLRLSKLLRQKRMDAGALNLASPE 689
Query: 465 PVFLFD-EYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
D E P V + D N L EEFMLLAN + A I +FP +ALLRRH P
Sbjct: 690 VRIETDSELSDPVADVKTKALLDTNSLVEEFMLLANISVAARIYESFPQTALLRRHATPP 749
Query: 523 MRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLA 580
E K L LD SSS SL++ + + F+ LI ATR M A
Sbjct: 750 PSNFEELITQLSKKRNLTLDVSSSLALANSLDKC---VDERNPFFNTLIRILATRCMTSA 806
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
YFC+G ++++ HY LA P+YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 807 EYFCAG-AHSESEFRHYGLASPIYTHFTSPIRRYADLVVHRQLAAAIGYE 855
>gi|297265110|ref|XP_001114025.2| PREDICTED: DIS3-like exonuclease 2-like [Macaca mulatta]
Length = 590
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 157/402 (39%), Positives = 219/402 (54%), Gaps = 40/402 (9%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDAPVTKDETTCISQDTRALPEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG VGVH
Sbjct: 350 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+I SC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 470 LTPEGKILDEWFGRTIICSCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEV 525
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTP 475
+++ +L++++K L+ +RF DGALRL+ K F D E G P
Sbjct: 526 HQAVLNLHQIAKQLRQQRFADGALRLDQLKLAFTLDHETGLP 567
>gi|402220533|gb|EJU00604.1| RNB-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 983
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 165/474 (34%), Positives = 242/474 (51%), Gaps = 46/474 (9%)
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
TP P P++ + + P + ++ + ID+W+ +S +P+ H + G
Sbjct: 417 TPVSPNLPRIRLRTRQAPQLVHQK------------IVVSIDKWDVDSRYPEGHFVRALG 464
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLS-----RKDLRNFC 283
+ G E + ++L E + F L CLP W VP + S R+DLR
Sbjct: 465 QVGSKEAEQESLLLEWEVPYRAFGRAILDCLPKEGDAWVVPPKTEDSIVWRDREDLREMI 524
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
I +IDP D+DDAL RL +G GVHIADVS+FVLP A+D EA R T+VY++
Sbjct: 525 ICSIDPPGCQDIDDALHARRLPNGNIEAGVHIADVSHFVLPDNAMDTEAAARGTTVYLVD 584
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
++I MLP LL + SL V+RLAFS+ W+L +++ ++VI S +Y+ AQ
Sbjct: 585 KRIDMLPSLLGTNLCSLRAHVERLAFSVIWELTPEAKIINVRFTKSVIASKAAFTYKEAQ 644
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
D ++ ++ + E SI+ L ++K L+ R GAL L +
Sbjct: 645 TRKD---NLALTDPVSE----------------SIRLLNALAKKLRAARMAAGALNLASP 685
Query: 464 KPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
+ + E P D + + N L EEFMLLAN + A I FP +A+LRRH P
Sbjct: 686 EVRIQMESPESSDPVDVEQKEQLETNSLVEEFMLLANISVAAKIQETFPQTAVLRRHQPP 745
Query: 522 NMRKLREFE-AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQL 579
E + G++LD SSSG SL+ + D F+IL+ ATR M+
Sbjct: 746 PASNFELLEDVLLKRKGMKLDISSSGALANSLDTC---VIADEPDFNILVRIMATRCMRP 802
Query: 580 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
A YFC+G +T +GHY LA P+YTHFTSP+RR+ D++VHR L AA+ L+
Sbjct: 803 AEYFCAGSVSRET-FGHYGLASPIYTHFTSPIRRFADVLVHRQLAAAINYTPLH 855
>gi|355565272|gb|EHH21761.1| hypothetical protein EGK_04897 [Macaca mulatta]
Length = 580
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 157/402 (39%), Positives = 219/402 (54%), Gaps = 40/402 (9%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDAPVTKDETTCISQDTRALPEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG VGVH
Sbjct: 350 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+I SC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 470 LTPEGKILDEWFGRTIICSCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEV 525
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTP 475
+++ +L++++K L+ +RF DGALRL+ K F D E G P
Sbjct: 526 HQAVLNLHQIAKQLRQQRFADGALRLDQLKLAFTLDHETGLP 567
>gi|333377320|ref|ZP_08469055.1| ribonuclease R [Dysgonomonas mossii DSM 22836]
gi|332884640|gb|EGK04897.1| ribonuclease R [Dysgonomonas mossii DSM 22836]
Length = 718
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 268/552 (48%), Gaps = 85/552 (15%)
Query: 97 GMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN 156
MN M++ + P G V+ I+ER ++ VG L+V + F
Sbjct: 120 AMNGDRVKIQMLAKRKGRDPEGEVLEILER--KQTTFVGTLDVQKQF------------- 164
Query: 157 RSSLSVPDREYIQLTPTHPKYPKMVVLVKDL--PDSIKKRLEEGDATIEMELVAARIDEW 214
+ V D + +L D+ P K +GD + +E+V EW
Sbjct: 165 --AFLVMDSK---------------ILANDIFIPKENLKGGNDGDKAL-VEIV-----EW 201
Query: 215 NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VPWEVPQEEL 273
+++ P V+ + G+ GE ++NAIL E + PE + +P ++ EE+
Sbjct: 202 PQKAKNPIGKVIDILGKAGENNTEMNAILAEFGLPYK--YPEKVEAAANKIPDDISAEEI 259
Query: 274 LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 333
R+D+RN FTIDP A D DDALSI++L +G VGVHIADV+++V G +D E +
Sbjct: 260 AKREDMRNTTTFTIDPRDAKDFDDALSIKQLKNGRWEVGVHIADVTHYVQEGDTIDKEGE 319
Query: 334 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 393
R+TS+Y++ R IPMLP LS + SL P D+L +S+ ++L+ ++ I RTVI S
Sbjct: 320 SRATSIYLVDRTIPMLPERLSNNLCSLRPHEDKLCYSVIFELDDEANIKKHRITRTVIHS 379
Query: 394 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 453
+ +YE AQDII+G EG D I L +++K L+ KRF
Sbjct: 380 DRRFTYEEAQDIIEG----------AEG-----------DFKEDILQLNDLAKKLRAKRF 418
Query: 454 TDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD-- 511
DGA+ + + F DE G P +D N L EEFMLLANKT AE + +
Sbjct: 419 NDGAIAFDRHEVRFEIDEKGKPLSVYFKYAKDSNKLIEEFMLLANKTVAEFVGNVPKNKN 478
Query: 512 --SALLRRHPAPNMRKLREFEAFCSKHGLQL-----DTSSSGQFHQSLEQAREKLKDDYV 564
+ + R H PN K++ F + G ++ T+ S + L++ K ++
Sbjct: 479 AKTFVYRIHDIPNTEKMKNLSEFIRRFGYKIKVDGTKTNVSKAINHLLDEVSGKPEE--- 535
Query: 565 LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 624
+++ A R M A Y + GHY LAF YTHFTSP+RRYPD++VHR L
Sbjct: 536 --NLISTIAIRAMAKAIYST-------VNIGHYGLAFEYYTHFTSPIRRYPDMMVHRLLT 586
Query: 625 AALEAEKLYWKH 636
L+ + KH
Sbjct: 587 RYLDGGRSVNKH 598
>gi|254584977|ref|XP_002498056.1| ZYRO0G01166p [Zygosaccharomyces rouxii]
gi|238940950|emb|CAR29123.1| ZYRO0G01166p [Zygosaccharomyces rouxii]
Length = 993
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 192/562 (34%), Positives = 277/562 (49%), Gaps = 78/562 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVVSI RS R+ VG + N GG++
Sbjct: 379 QPTARVVSITRRSWRQ--YVGQIAPNSVDAQNGGTQN----------------------- 413
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
V+L+ I+ R + +V + +D W E +P H + G
Sbjct: 414 ----VFVILMDKCLPKIRIRTRRAHELLSQRIVIS-VDSWPETHKYPLGHFVRNLGEVES 468
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQ----------EELL-SRKDLRN 281
V+ + A+L E+ + FS + L CLP W+ P+ + LL R+DLR+
Sbjct: 469 VQAETEALLLEHDVEYRPFSKKVLECLPPEGHDWKAPETLDDASAVSKDPLLPKRRDLRD 528
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL ++L +G VGVHIADV++FV P TALD E R TSVY+
Sbjct: 529 KLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPNTALDGEGASRGTSVYL 588
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ ++I MLP+LL ++ SL P VDR AFS+ W+LN D+V+ ++VI+S SYE
Sbjct: 589 VDKRIDMLPMLLGTDLCSLKPYVDRFAFSVLWELNENADIVNVDFAKSVIKSREAFSYEQ 648
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ ID D + L G +++L ++S LK+KR GAL L
Sbjct: 649 AQLRID---DPNQQDELTHG----------------MRALLKLSIKLKEKRINAGALNLA 689
Query: 462 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
+ + V + E P + + N L EEFMLLAN + A I +FP +A+LRRH +
Sbjct: 690 SPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDSFPQTAMLRRHAS 749
Query: 521 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 576
P N L E ++ G+ + SS SL++ + KD Y F+ L+ +TR
Sbjct: 750 PPSTNFELLNEM--LQTRKGMSISLESSKALADSLDRCIDP-KDPY--FNTLVRIMSTRC 804
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
M A YF SG + +D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L H
Sbjct: 805 MMAAQYFYSGAYS-YSDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLDLSH 863
Query: 637 R-----RMLPKNNHREGVRGRF 653
R M+ KN +++ +F
Sbjct: 864 RDKNRMDMICKNINKKHRNAQF 885
>gi|406884788|gb|EKD32133.1| hypothetical protein ACD_77C00174G0023 [uncultured bacterium]
Length = 705
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 187/596 (31%), Positives = 285/596 (47%), Gaps = 91/596 (15%)
Query: 57 SSSEAYNQEMIEREGYNYI--NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTK 114
S E+ + + REGY +I G +K+ + D I R+S + TK
Sbjct: 38 SREESTGKVSMTREGYAFIIREGIEDDVFVPAQKLRGALHGD----IVRVSIVAKKSLTK 93
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNV--NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 172
R G V+ I+ER+ R +G L + NQ +
Sbjct: 94 RYEGEVIEIVERTKR--PFIGILQITGNQAW----------------------------- 122
Query: 173 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
++ K++P IK +E + VAA +DEW + P H++ V G+
Sbjct: 123 -------VICENKNMPHDIKIPIEGVEDIYNGFKVAAIVDEWPRSAEEPIGHIIEVLGKP 175
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE +++AIL E + F P+ + ++ EE+ R+D R FTIDP+ A
Sbjct: 176 GENNTEMHAILTEFGLPFR-FDPKVEKEAEKISEKIDPEEIKRRRDFRGVTTFTIDPTDA 234
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D DDALS+++L +G VGVHIADV+++V PGT ++ EA R+TSVY++ R +PMLP
Sbjct: 235 KDFDDALSLKKLDNGNWEVGVHIADVTHYVRPGTLVEQEALERATSVYLVDRTVPMLPEK 294
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS ++ SL P ++L FS ++LN ++ RW GRT+I S + YE AQ+ I+ K
Sbjct: 295 LSNKLCSLRPNEEKLCFSAVFELNEKAKIITRWFGRTIIESDYRFDYEEAQNTIETK--- 351
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
EG + I L++++ L+++RF+ GA+ E + DE
Sbjct: 352 -------EG-----------PLKNEILKLHQLASSLRNERFSKGAISFERPEMKVEVDEA 393
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA--LLRRHPAPNMRKLREFE 530
G P +D N+L EEFMLLANK A + DS + R H PNM K+
Sbjct: 394 GKPIRVYQKESKDSNWLIEEFMLLANKEVAFFVGGKGRDSKTFVYRIHEEPNMDKVTILR 453
Query: 531 AFCSKHGLQLDTSS-----SGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
F G + + SG+ ++ L + + ++ + +I+ A R M A Y
Sbjct: 454 TFVKHFGYDMSPTKNARELSGEINKLLSTVKGRPEESAI--EIM---ALRSMARARYSTD 508
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT----LNAALEAEKLYWKHR 637
+ GHY LAF YTHFTSP+RRYPD++VHR L+ A +K Y++ R
Sbjct: 509 -------NAGHYGLAFDYYTHFTSPIRRYPDMMVHRLLALYLDNAKSQDKGYYEDR 557
>gi|355750921|gb|EHH55248.1| hypothetical protein EGM_04408 [Macaca fascicularis]
Length = 580
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 157/402 (39%), Positives = 219/402 (54%), Gaps = 40/402 (9%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 HGDAPVTKDETTCISQDTRALPEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG VGVH
Sbjct: 350 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFEVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L G ++D W GRT+I SC KLSYEHAQ +I+ + + L P + + +V
Sbjct: 470 LTPEGKILDEWFGRTIICSCTKLSYEHAQSMIESPTEKIPAKEL----PPISPEHSSEEV 525
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTP 475
+++ +L++++K L+ +RF DGALRL+ K F D E G P
Sbjct: 526 HQAVLNLHQIAKQLRQQRFADGALRLDQLKLAFTLDHETGLP 567
>gi|326334664|ref|ZP_08200871.1| ribonuclease R [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325693114|gb|EGD35046.1| ribonuclease R [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 685
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 160/435 (36%), Positives = 229/435 (52%), Gaps = 26/435 (5%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V RI +W + P + + G+ GE +++AIL E + F E +
Sbjct: 141 VLVRITQWTSRANSPYGVIEKILGKPGEHNTEMHAILAEYGLPYE-FPEEVEKYAQGLDT 199
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+ QEE+ R+D+R FTIDP A D DDALS ++L +G VGVHIADVSY+V P T
Sbjct: 200 TIKQEEIARRRDMREVLTFTIDPRDAKDFDDALSFQKLENGNYEVGVHIADVSYYVQPNT 259
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R +PMLP +LS SL P ++ FS ++L+ ++ + W+
Sbjct: 260 ILDDEAYKRATSVYLVDRVVPMLPEVLSNFACSLRPEEEKYTFSAIFELSPRAEIRNVWL 319
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGW--------PQLYGQFE-WSDVVRS 437
GRTVIRS + SYE AQ +I+ FD L + P+ G ++ +V +
Sbjct: 320 GRTVIRSDARFSYEEAQAVIEA-FDTPYREVLTDFMMPEEISIRPE--GSYKVIQPIVEA 376
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 497
I SL +++I +DKR GA+ + + FL DE P ++ N L EEFMLLA
Sbjct: 377 ILSLNYLAEIFRDKRMKSGAISFDKLEVKFLLDENNNPIGVYTKESKEANKLIEEFMLLA 436
Query: 498 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 557
N+ AE A + + R H P+ KL + + S+ G +L+ S S+ E
Sbjct: 437 NRKVAEY-ASKLKKTFVYRVHDEPDEEKLIQMQGIISRFGYKLNMQSKDSIAHSINHLLE 495
Query: 558 KL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
++ K + L D L A R M A+Y + GHY LAF YTHFTSP+RRYP
Sbjct: 496 EVHGKKEQNLVDTL---AIRSMSKAAYSTH-------NIGHYGLAFADYTHFTSPIRRYP 545
Query: 616 DLVVHRTLNAALEAE 630
D++VHR L L+ E
Sbjct: 546 DVMVHRLLQRYLDGE 560
>gi|383449353|ref|YP_005356074.1| Ribonuclease R [Flavobacterium indicum GPTSA100-9]
gi|380500975|emb|CCG52017.1| Ribonuclease R [Flavobacterium indicum GPTSA100-9]
Length = 725
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 176/522 (33%), Positives = 261/522 (50%), Gaps = 56/522 (10%)
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 172
++RP VV I+ER+ ++ VG ++V + F + +T
Sbjct: 130 SRRPEAEVVEILERA--KNEFVGVIDVQKNFAF------------------------VTT 163
Query: 173 THPK-YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
+ K Y + + D+ ++ + G E+V R+ +W +++ P V+ V G+
Sbjct: 164 ANAKMYTDIFIPKNDIGEA-----QHG------EVVLVRMTDWPKKADSPFGKVVKVLGK 212
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 291
GE +I+AIL E + F E + + + EE+ R+DLRN FTIDP
Sbjct: 213 PGEHNTEIHAILAEYGLPYD-FPIEVEAFANKIDTSITVEEIAKRRDLRNVLTFTIDPKD 271
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
A D DDALS + L +G +GVHIADVS++V GT LD EA R+TSVY++ R +PMLP
Sbjct: 272 AKDFDDALSFQVLENGNYEIGVHIADVSHYVKEGTILDDEAYHRATSVYLVDRVVPMLPE 331
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
+LS SL P ++ FS + LN +V+D W GRTVI S + +YE AQ+II+ K D
Sbjct: 332 VLSNFACSLRPHEEKYTFSAVFQLNEKAEVLDSWFGRTVIYSDQRFAYEEAQEIIETKSD 391
Query: 412 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDE 471
+ ++ G Q + +V + L E++K L+ KR GA+ + + F +E
Sbjct: 392 IIPAHISLTG-EQYHAP---KPIVEATLKLDELAKKLRSKRMAAGAISFDKVEVKFNLNE 447
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P +D N L EEFMLLAN+ AE I + + + R H PN KL ++
Sbjct: 448 NAEPVGVFFKQSKDANHLIEEFMLLANRKVAEFIGKQ-KKTFVYRIHDEPNEDKLMSLQS 506
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFK 589
SK G ++ S SL E + K + + D L A R M A+Y
Sbjct: 507 VISKFGYSINFKSKATISSSLNTLLEDVQGKKEQNMVDTL---AIRCMSKAAYSTQ---- 559
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
+ GHY LAF Y+HFTSP+RRYPD++ HR L L+ K
Sbjct: 560 ---NIGHYGLAFDYYSHFTSPIRRYPDVMAHRLLQYYLDGGK 598
>gi|366992478|ref|XP_003676004.1| hypothetical protein NCAS_0D00590 [Naumovozyma castellii CBS 4309]
gi|342301870|emb|CCC69640.1| hypothetical protein NCAS_0D00590 [Naumovozyma castellii CBS 4309]
Length = 998
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 194/562 (34%), Positives = 278/562 (49%), Gaps = 78/562 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV+I PRR W Y G P+ +Q T
Sbjct: 384 QPTARVVAI----PRR----------SWRQYVGQI------------APNSVDLQTGGTQ 417
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ ++++ K LP I+ R ++ +V + +D W +P H + G
Sbjct: 418 NVF--VILMDKCLP-KIRIRTRRAKELLDKRIVIS-VDSWPTTHKYPLGHFVRDLGGIET 473
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV------------PWEVPQEELL-SRKDLRN 281
+ + A+L E+ + FS + L CLP P E+ ++ LL RKDLR+
Sbjct: 474 AQAETEALLLEHDVEYRPFSKKVLECLPAEGHEWKAPEVLTDPVEIAKDPLLVRRKDLRD 533
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL +RL +G VGVHIADV++FV PGTALD E R TSVY+
Sbjct: 534 KLICSIDPPGCVDIDDALHAKRLPNGNWEVGVHIADVTHFVKPGTALDAEGASRGTSVYL 593
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ ++I MLP+LL ++ SL P VDR AFS+ W+L+ D+V+ ++VI+S SYE
Sbjct: 594 VDKRIDMLPMLLGTDLCSLKPYVDRFAFSVLWELDENADIVNVDFTKSVIKSREAFSYEQ 653
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ ID D ++ L +G +++L ++S LK KR GAL L
Sbjct: 654 AQLRID---DASQTDDLTQG----------------MRALLQLSIKLKQKRLDAGALNLA 694
Query: 462 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
+ + V + E P + + N L EEFMLLAN + A I AFP +A+LRRH A
Sbjct: 695 SPEVKVHMDSETSDPGEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAA 754
Query: 521 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 576
P N L E + + + SS SL++ E KD Y F+ L+ +TR
Sbjct: 755 PPSTNFELLNEM--LHQRKNMSISLESSKALADSLDRC-EDPKDPY--FNTLVRIMSTRC 809
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
M A YF SG + D+ HY LA +YTHFTSP+RR+ D+V HR L A+ E L H
Sbjct: 810 MMAAQYFYSGAYS-YPDFKHYGLAVDIYTHFTSPIRRFCDVVAHRQLAGAIGYEPLDLSH 868
Query: 637 R-----RMLPKNNHREGVRGRF 653
R M+ +N +R+ +F
Sbjct: 869 RDKNKMDMICRNINRKHRNAQF 890
>gi|67465834|ref|XP_649075.1| exosome complex exonuclease [Entamoeba histolytica HM-1:IMSS]
gi|56465429|gb|EAL43686.1| exosome complex exonuclease, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449707926|gb|EMD47488.1| exosome complex exonuclease, putative [Entamoeba histolytica KU27]
Length = 901
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 194/653 (29%), Positives = 298/653 (45%), Gaps = 103/653 (15%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PTG++V II+R+ W G ++++ + S+ + PT
Sbjct: 312 KPTGKIVGIIKRN--------------WKPLPGYIKQESSGSYST-------NLLFLPTD 350
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
++P P IK R A + + + ID W+ S +P H + G G+
Sbjct: 351 KRFP---------PIRIKAR---DPAKLASQRILVLIDAWDTTSKYPTGHYVATLGNVGD 398
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 294
+ AIL + I F L CLP +P+E+ ++ L R+D R + +IDP TD
Sbjct: 399 KASETEAILELHEIPHYEFPEIVLKCLPVLPFEITEDYLKGRRDFRKENVCSIDPPGCTD 458
Query: 295 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 354
+DDAL + L +G +GVHIADVS FV P TALD EA R T+VY+ R+I MLP L+
Sbjct: 459 IDDALHCKILPNGNYEIGVHIADVSCFVKPHTALDEEAAKRGTTVYLADRRIDMLPKPLT 518
Query: 355 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 414
E + S+ D L FS+ W+L+ +V++ + ++ S +Y AQ +ID K
Sbjct: 519 EVICSITQNTDTLTFSVVWELDKDANVINCTYHKGIVHSYRAYAYGQAQSVIDDK----- 573
Query: 415 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT 474
SN S+ + ++++ +SK LK KR GAL L +S+ DE
Sbjct: 574 SNQ--------------SEYAQQLRAMLMLSKKLKQKRIDAGALMLASSEIKIEKDEQFN 619
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + N + EE+MLLAN A+ I AFP A+LRRHP P+
Sbjct: 620 PIGVKEYQTYETNSMVEEYMLLANVWVAKKIYDAFPHCAMLRRHPPPDEHTFEWLANVLK 679
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
G LD SSS +SL++ +D ++ I+ TR MQ A YF SG F + ++
Sbjct: 680 HKGKSLDFSSSKALSESLDKC--GTNEDPIIGKIMRILVTRCMQQAKYFSSGYFSYN-EF 736
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HY LA +YTHFTSP+RRY D++VHR L A+ +++
Sbjct: 737 RHYGLAAEIYTHFTSPIRRYADVMVHRLLAQAIGFDQI---------------------- 774
Query: 655 TGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYM 714
D S E + +A + N R ++ A ++Y
Sbjct: 775 -------DLTMSKEK------------------MKEIADNINHRHTMAQHAGRASTQMYT 809
Query: 715 WILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETT 767
I LK KEV + + V+ + + I I + +E + D+ G++ + E T
Sbjct: 810 LIFLKDKEVAV-DGYVIKVMKNGIIINIPQYGLEVIVLIDQKYGMVFDENENT 861
>gi|343084834|ref|YP_004774129.1| ribonuclease R [Cyclobacterium marinum DSM 745]
gi|342353368|gb|AEL25898.1| ribonuclease R [Cyclobacterium marinum DSM 745]
Length = 725
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/492 (34%), Positives = 250/492 (50%), Gaps = 45/492 (9%)
Query: 148 GSRKDAKKNRSSLSVPDR---EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEM 204
G+R++ K L + +R E++ P++ +V K + I R +
Sbjct: 144 GNRREGK----VLEIMERSRDEFVGRIEISPRFAFVVPDFKKMHHDIFVRKSDLAGAQHN 199
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
+ V ++ +W E P ++HV G+ G+ E +I++I+ E + + E + +
Sbjct: 200 QKVVVKLTDWKEGDKSPSGKIIHVLGKAGDHEVEIHSIMAEFGLPFD-YPEEVEAEAESI 258
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
+P++E+ RKD R+ FTIDP+ A D DDA+S L +G +GVHIADV+++V P
Sbjct: 259 SEVIPEDEIKKRKDFRDIDTFTIDPADAKDFDDAISFRYLDNGNMEIGVHIADVTHYVKP 318
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
T ++ EA R+TSVY++ R IPMLP LS + SL P D+L FS +++ +V D
Sbjct: 319 KTLMEKEAYDRATSVYLVDRTIPMLPERLSNGLCSLRPNEDKLTFSCVFEITDQAEVKDF 378
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 444
WIGRTVI S + +YE AQ+ +D N G E++ + I SL
Sbjct: 379 WIGRTVIHSNRRFTYEEAQENMD--------NESG----------EYAKDLLKINSL--- 417
Query: 445 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 504
+K+L+ RF GA+ E + F DE GTP ++ R+D++ L EEFMLLANKT A
Sbjct: 418 AKLLRSARFKKGAINFETVEVKFQLDESGTPTGLIIKERKDVHKLIEEFMLLANKTVATY 477
Query: 505 I--ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
I + + R H P++ KL F F K G ++ + SL KL DD
Sbjct: 478 IYNKNKGKSTFVYRVHDYPDLEKLATFSNFAKKFGHEIKILDEKKVSNSL----NKLMDD 533
Query: 563 YV---LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
V +IL A R M A Y H+ LAF YTHFTSP+RRYPD++V
Sbjct: 534 IVGKPEQNILEQLAIRSMAKAKYTTEPK-------QHFGLAFDHYTHFTSPIRRYPDMMV 586
Query: 620 HRTLNAALEAEK 631
HR L L+ K
Sbjct: 587 HRLLQHYLDGGK 598
>gi|145219389|ref|YP_001130098.1| RNAse R [Chlorobium phaeovibrioides DSM 265]
gi|145205553|gb|ABP36596.1| RNAse R [Chlorobium phaeovibrioides DSM 265]
Length = 794
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 185/544 (34%), Positives = 269/544 (49%), Gaps = 84/544 (15%)
Query: 110 SYPTKRPTGRVVSIIERSPRRDGIVGFL-NVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 168
S P +R G + +II R R IVG L N+ FN K RK
Sbjct: 197 STPHQRCEGLITNIINR--RITTIVGTLVRANRRFNLKADERK----------------- 237
Query: 169 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
P++++ +K+ + ++G + EL ++++E QA VL +
Sbjct: 238 -------ILPEIIISIKN-----SAKAKDGQKVLVGEL------DFSKEGTI-QAKVLEI 278
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTID 288
G G+ +++AI I + F E + + V ++L R D+R+ +FTID
Sbjct: 279 LGTAGDSAVEVSAIARSKGIDET-FEKEIIKAAETIKMGVTDKDLKERLDIRDKVLFTID 337
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P A D DDALS+E L DG R+GVHIADVS++V +ALD EA RSTSVY++ R IPM
Sbjct: 338 PVDAKDFDDALSVESLGDGNWRIGVHIADVSHYVPEDSALDKEALKRSTSVYLVDRVIPM 397
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP LSE++ SLNPGVDR+AFS+F+ +N G V + +TVI S + +YE QDI++
Sbjct: 398 LPSRLSEDICSLNPGVDRMAFSVFFTMNEKGKVSKQEFHKTVIHSKRRFTYEDVQDILNN 457
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 468
G+G D + ++ L ++S +L+++RF G L E + F
Sbjct: 458 ----------GKG-----------DYLMELQLLEKISVLLREERFRHGGLDFETEEVRFR 496
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALLRRHPAPN 522
G P + + R + L EEFMLLAN+ AE + + F P + R H +P
Sbjct: 497 LGSKGEPLEVMKKERLGSHRLIEEFMLLANRKVAEHLTKTFKDGKKEPQPVIYRVHGSPQ 556
Query: 523 MRKLREFEAFCSKHG--LQLDTSSSGQF--HQSLEQAREKLKDDYVLFDILIN-YATRPM 577
++ F K G L+L+ G ++L + +K++ V F L+N R M
Sbjct: 557 QERVTILANFVKKMGYELKLNKGKDGPIVSAKALRELLQKVRGSNVEF--LVNELVLRCM 614
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
A Y D GHY L F YTHFTSP+RRYPDL+VHR L E E K R
Sbjct: 615 SKAVYTGEND-------GHYGLGFDHYTHFTSPIRRYPDLIVHRML---FEYEAFRKKRR 664
Query: 638 RMLP 641
++ P
Sbjct: 665 KITP 668
>gi|342319090|gb|EGU11041.1| Mitotic control protein dis3 [Rhodotorula glutinis ATCC 204091]
Length = 1020
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/470 (36%), Positives = 241/470 (51%), Gaps = 44/470 (9%)
Query: 211 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEV 268
ID W S +P+ H + V G+ G E ++ ++L E + FS LSCLP W V
Sbjct: 459 IDRWPITSRYPEGHFVRVLGQVGSKEGEVESLLEEWEVPYRPFSSAILSCLPEEGDKWAV 518
Query: 269 P-------QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYF 321
P + +R+DLR+ I +IDP D+DDAL +RL +G + GVHIADVS+F
Sbjct: 519 PPKGEADVKNVWRAREDLRDEIICSIDPPGCQDIDDALHAKRLPNGNIQAGVHIADVSHF 578
Query: 322 VLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV 381
V P +D EA R T+VY++ ++I MLP LL + SL P V+RLAFS+ W+L+ ++
Sbjct: 579 VHPDNPMDAEAASRGTTVYLVDKRIDMLPSLLGTNLCSLRPYVERLAFSVIWELDDDANI 638
Query: 382 VDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSL 441
VD ++VI S +YE AQ D D ++ L EG I+ L
Sbjct: 639 VDVRFTKSVIASKEAFTYEAAQRRKD---DKSLTDPLTEG----------------IRLL 679
Query: 442 YEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANK 499
++ LK KR GAL L + + + E P D + N L EEFMLLAN
Sbjct: 680 NSIAIKLKAKRMAAGALNLASPEVKIHLEQSEQSGPVDVEHKELFETNSLVEEFMLLANI 739
Query: 500 TAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSK-HGLQLDTSSSGQFHQSLEQAREK 558
+ AE I + FP +A+LRRH P + K G+ LD S+SG SL++
Sbjct: 740 SVAERIYKQFPQTAVLRRHAPPPKTNFEVLQDVLQKRRGMTLDVSTSGALADSLDKC--- 796
Query: 559 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
+ + F+ L+ ATR M A YFCSG + + HY LA P+YTHFTSP+RRY D+
Sbjct: 797 VDPSFPAFNTLVRIMATRCMLSAEYFCSGSLP-ASQFSHYGLASPIYTHFTSPIRRYADV 855
Query: 618 VVHRTLNAALEAEKLY-------WKHRRMLPKNNHREGVRGRFLTGI-FY 659
+VHR L+AA+ L+ W + + N G +G I FY
Sbjct: 856 LVHRQLSAAISGLPLHTGLQTRAWVDKTLEVVNKRHRGAQGAARASIEFY 905
>gi|429750142|ref|ZP_19283202.1| ribonuclease R [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429165800|gb|EKY07832.1| ribonuclease R [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 733
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 232/431 (53%), Gaps = 28/431 (6%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V RI+EW ++S P V V G+ GE ++++IL E + + + E + +
Sbjct: 195 VLVRIEEWKDKSDSPTGVVEQVLGKPGEQNTEMHSILAEYGLPYT-YPEEVDTYAKALDV 253
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+ +EE+ R+D+R FTIDP A D DDALS L +G VGVHIADVS++V GT
Sbjct: 254 TITEEEIAKRRDMREVLTFTIDPKDAKDFDDALSFRVLGNGNYEVGVHIADVSHYVKEGT 313
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R +PMLP +LS SL P D+ FS +++N ++V++WI
Sbjct: 314 ILDEEAYNRATSVYLVDRVVPMLPEVLSNFACSLRPNEDKYTFSAIFEMNGKAEIVNQWI 373
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGW---PQLYGQFEW----SDVVRSIK 439
GRTVI S + +YE AQ II+ ++GE + P+L +++V ++
Sbjct: 374 GRTVIHSSQRFAYEEAQAIIE-------EGSVGEHYTLQPELSITNSERTIPAEIVDAVL 426
Query: 440 SLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANK 499
+L ++++L+ KR GA+ + + F DE P ++ N L EEFMLLAN+
Sbjct: 427 TLNTLAQVLRHKRMQRGAISFDKIEVKFQLDENDNPIGVYFKESKEANKLIEEFMLLANR 486
Query: 500 TAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 559
AE +++ + + R H P+ KL + S+ G ++ + SL E++
Sbjct: 487 RVAEFVSK-MKKTFVYRVHDEPDAEKLEQLNGVISRFGYAINLQNKNTITHSLNTLLEEV 545
Query: 560 --KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
K + L D L A R M A+Y + GHY LAF YTHFTSP+RRYPD+
Sbjct: 546 KGKKEQNLVDTL---AIRSMAKAAYSTK-------NIGHYGLAFDDYTHFTSPIRRYPDV 595
Query: 618 VVHRTLNAALE 628
+VHR L L+
Sbjct: 596 MVHRLLQLYLD 606
>gi|319953015|ref|YP_004164282.1| rnase r [Cellulophaga algicola DSM 14237]
gi|319421675|gb|ADV48784.1| RNAse R [Cellulophaga algicola DSM 14237]
Length = 729
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 161/446 (36%), Positives = 227/446 (50%), Gaps = 26/446 (5%)
Query: 187 LPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYEN 246
+P E+GD I +EW +++ P + V G+ GE +I++IL E
Sbjct: 176 IPKDKINNAEDGDKVI------VEYNEWPDKTDSPYGTITQVLGKPGEHNTEIHSILAEY 229
Query: 247 AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 306
+ F E + + EE+ R+D+R+ FTIDP A D DDALS E L +
Sbjct: 230 GLPYE-FPVEVEQFANDLDTSIKPEEIAKRRDMRDTLTFTIDPRDAKDFDDALSFEVLDN 288
Query: 307 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 366
G +G+HIADVS+++ P T +D EA R+TSVY++ R +PMLP +LS SL P ++
Sbjct: 289 GNFEIGIHIADVSHYLTPDTVMDDEAYERATSVYLVDRVVPMLPEVLSNNACSLRPHEEK 348
Query: 367 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY 426
FS ++++ V+ W GRTVI S + SYE AQ II+ K N++ E
Sbjct: 349 YTFSAIFEIDKKAHVIKEWFGRTVINSNERFSYEEAQHIIENKV-----NSIPEDISIRA 403
Query: 427 GQFEWS-DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRED 485
+E S +VV + L E++KI++ +R GA+ + + F G P +D
Sbjct: 404 AAYEVSEEVVNATLKLDELAKIMRSRRMNAGAISFDKVEVRFNLTPEGEPESVYFKEAKD 463
Query: 486 LNFLFEEFMLLANKTAAEVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSS 544
N L EEFMLLAN+ AE I + P+ + R H PN KL S+ G +LD S
Sbjct: 464 ANKLIEEFMLLANRKVAEFIGKQKPEKTFVYRVHDEPNEEKLMALNGIISRFGHKLDFKS 523
Query: 545 SGQFHQSLEQARE--KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFP 602
SL Q E K K + + D L A R M A Y + GHY LAF
Sbjct: 524 KKTISSSLNQLLEDVKGKGEQNMVDTL---AIRTMSKAIYTTD-------NIGHYGLAFD 573
Query: 603 VYTHFTSPLRRYPDLVVHRTLNAALE 628
YTHFTSP+RRYPD++VHR L L+
Sbjct: 574 YYTHFTSPIRRYPDVMVHRLLQHYLD 599
>gi|347534972|ref|YP_004842397.1| ribonuclease R [Flavobacterium branchiophilum FL-15]
gi|345528130|emb|CCB68160.1| Ribonuclease R [Flavobacterium branchiophilum FL-15]
Length = 726
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 177/550 (32%), Positives = 275/550 (50%), Gaps = 70/550 (12%)
Query: 94 QNDGMN-AIERLSAMISSY---PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGS 149
QN+ +N A+++ + + Y K+P G VV +IER + VG + + + F +
Sbjct: 108 QNNNLNHALDKDTVKVYVYNRRKGKKPEGEVVEVIER--HKSEFVGVIEIQKNFAF---- 161
Query: 150 RKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAA 209
+T +PK + + KD + GDAT ++V
Sbjct: 162 --------------------VTTANPKMYTDIFIPKD---------KIGDAT-HGDVVLV 191
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP 269
I++W + + P V+ V G+ GE +I+AIL E + S F + + +
Sbjct: 192 HIEDWPKRADSPFGAVIKVLGKPGEHNTEIHAILAEYGLP-SEFDLDVTLFAQKIDTSIQ 250
Query: 270 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 329
+ E+ +R+D+R+ FTIDP A D DDALS + L +G +G+HIADVSY++ T LD
Sbjct: 251 ESEIANRRDMRDTLTFTIDPKDAKDFDDALSYKVLDNGNFEIGIHIADVSYYLKENTILD 310
Query: 330 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 389
EA R+TSVY++ R +PMLP +LS SL P ++ FS +++NS VV W GRT
Sbjct: 311 DEAYQRATSVYLVDRVVPMLPEVLSNFACSLRPNEEKYTFSAVFEINSKAQVVSEWFGRT 370
Query: 390 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ-FEWSD-VVRSIKSLYEVSKI 447
VI S + +YE AQ +I+ + S+T+ + G +E + V+ ++ L ++KI
Sbjct: 371 VIYSNQRFAYEEAQYLIENQ-----SDTIIPSAISITGTAYEVAQPVIDAVLKLDTLAKI 425
Query: 448 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 507
L+ KR DGA+ + + F E G P +D N L EEFMLLAN+ AE I +
Sbjct: 426 LRKKRMADGAISFDKVEVKFHLSEDGNPDGVYFKISKDANHLIEEFMLLANRKVAEFIGK 485
Query: 508 AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD------TSSSGQFHQSLEQAREKLKD 561
+ + R H PN KL + SK G +++ + + Q Q + ++E+
Sbjct: 486 Q-KKTFIYRIHDEPNEDKLFAMQDLISKFGYKVNFKKGDVSKALNQLMQDVHGSKEQ--- 541
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+++ A R M A Y + GHY LAF Y+HFTSP+RRYPD++VHR
Sbjct: 542 -----NLIDTLAIRSMSKAKYTTQ-------NIGHYGLAFDYYSHFTSPIRRYPDVMVHR 589
Query: 622 TLNAALEAEK 631
L L+ K
Sbjct: 590 LLQFYLDGGK 599
>gi|336172138|ref|YP_004579276.1| ribonuclease R [Lacinutrix sp. 5H-3-7-4]
gi|334726710|gb|AEH00848.1| ribonuclease R [Lacinutrix sp. 5H-3-7-4]
Length = 734
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 163/477 (34%), Positives = 245/477 (51%), Gaps = 33/477 (6%)
Query: 166 EYIQLTPTHPKYPKMVVLV------KDLPDSIKKRLEEGDATIEMELVAARIDEWNEESP 219
+Y+ + HPK V+V KD+ I K L+ D + V +++W E++
Sbjct: 150 DYVGIIQIHPKNNYAFVVVDGNKMNKDIFVPINKTLKAQDG----DKVLVTLEDWPEKAD 205
Query: 220 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 279
P VL V G+ GE +I+AIL + + F E + ++ EE+ R+D+
Sbjct: 206 SPNGKVLKVLGKAGEHNTEIHAILADYGLPYE-FPKEVEDYANNIDLKIQPEEIKKRRDM 264
Query: 280 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 339
R FTIDP A D DDALS L +G +G+HIADVS+++ GT LD EA R+TSV
Sbjct: 265 RKDLTFTIDPKDAKDFDDALSFTVLENGNYEIGIHIADVSHYLQEGTVLDDEAYERATSV 324
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 399
Y++ R +PMLP +LS SL P ++ FS ++L++ + + W GRTV S + +Y
Sbjct: 325 YLVDRVVPMLPEILSNGACSLRPHEEKYTFSAVFELDNKAQIKNEWFGRTVTYSDARFAY 384
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--VVRSIKSLYEVSKILKDKRFTDGA 457
E AQ II+ K + +N L G+ +D + ++ + E++KI++ KR GA
Sbjct: 385 EEAQAIIENKNNTIPANV------SLTGKEYKTDQAIADAVLKMDELAKIMRSKRMRSGA 438
Query: 458 LRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 517
+ + + F DE P +D N L EEFMLLAN+ +E + + P+ + R
Sbjct: 439 ISFDKVEVKFNLDEDANPVGVFFKTSKDANKLIEEFMLLANRKVSEFVGKQKPEKTFVYR 498
Query: 518 -HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYAT 574
H P+ KL + +K G +L+ + G QSL + + K + L D L A
Sbjct: 499 VHDEPDESKLAALQGVVAKFGHKLNF-NKGNVSQSLNKLLVDVQGKKEQNLVDTL---AI 554
Query: 575 RPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
R M A Y + GHY LAF Y+HFTSP+RRYPD++ HR L L+ EK
Sbjct: 555 RTMSKAEYTTH-------NIGHYGLAFDYYSHFTSPIRRYPDVMAHRLLQRYLDGEK 604
>gi|291392382|ref|XP_002712499.1| PREDICTED: DIS3 mitotic control homolog (S. cerevisiae)-like 2
[Oryctolagus cuniculus]
Length = 574
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 139/306 (45%), Positives = 186/306 (60%), Gaps = 9/306 (2%)
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
R+Y +PT + P++ V +KD P R ++ T L RI +W E+S F
Sbjct: 263 RKYALFSPTDHRVPRVYVPLKDCPQDFVGRPKDYANT----LFICRIVDWKEDSNFALGQ 318
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VPWEVPQEELLSRKDLRNFC 283
+ G+ GE+EP+ IL E + S FS E L CLP +PW VP EE R+DLR C
Sbjct: 319 LAKSLGQAGEIEPETEGILTEYGVDFSDFSSEVLECLPQRLPWTVPPEEFNKRRDLRKDC 378
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
IFTIDPSTA DLDDALS L+DG +VGVHIADVSYFV G+ LD A R+TSVY++Q
Sbjct: 379 IFTIDPSTARDLDDALSCRPLADGNFQVGVHIADVSYFVPEGSELDKVAAERATSVYLVQ 438
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
+ +PMLP LL EE+ SLNP DRL FS+ W L G ++D W GRT+IRSC KLSY+HAQ
Sbjct: 439 KVVPMLPRLLCEELCSLNPMTDRLTFSVIWTLTPEGKILDEWFGRTIIRSCTKLSYDHAQ 498
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+I+ + L P + + +V R++ +L+ +++ L+ +RF DGALRL+
Sbjct: 499 SMIENPAEKIPETAL----PPVSPEHSSEEVHRAVLNLHGIAQKLRRQRFADGALRLDQF 554
Query: 464 KPVFLF 469
P F
Sbjct: 555 LPRVPF 560
>gi|346974997|gb|EGY18449.1| mitotic control protein dis3 [Verticillium dahliae VdLs.17]
Length = 984
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 257/528 (48%), Gaps = 59/528 (11%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT +VV +I+R+ W Y G + ++S +E + L P
Sbjct: 375 QPTAKVVGVIKRN--------------WRQYVGHI-DPSSTSQSGTQGRRQENVFLIPMD 419
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
PK+ + + + + KRL ID W +S P H + G
Sbjct: 420 KCIPKIRIRTRQAAELLGKRL------------VVTIDAWERDSRHPVGHFVRSLGELET 467
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDLRNFCIFTID 288
+ + A+L E+ + F L CLP VP + R+DLR+ I +ID
Sbjct: 468 KQAETEALLLEHDVQYRPFPKTVLDCLPKEGHDWRVPTSLDDPGWRGREDLRSLLICSID 527
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P D+DDAL L +G VGVHIADVS FV P TA+D EA +R TSVY++ ++I M
Sbjct: 528 PIGCQDIDDALHARSLPNGNYEVGVHIADVSNFVKPLTAMDNEASIRGTSVYLVDKRIDM 587
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP+LL ++ SLNP ++R AFS+ W+L+ D+V+ ++VI+S LSYE AQ +D
Sbjct: 588 LPMLLGTDLCSLNPYIERFAFSVIWELDENADMVNVRFTKSVIKSREALSYEAAQLRVD- 646
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVF 467
D ++ L +G I+ L ++S+ LK KR GAL L + + V
Sbjct: 647 --DASQTDELTQG----------------IRMLMKLSRKLKQKRMDAGALSLSSPEVKVQ 688
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
+ E P D D L EEFML AN + A I AFP +A+LRRH AP
Sbjct: 689 MESETSDPIDVKTKELLDTMSLVEEFMLFANVSVAAKIYEAFPQTAILRRHGAPPKTNFD 748
Query: 528 EF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCS 585
E K GL+L SS SL+ + + F+ L+ ATR M A YFCS
Sbjct: 749 ELANQLKVKKGLELRVDSSKALADSLDTC---VDPENPFFNTLVRIMATRCMMSAEYFCS 805
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
G D ++ HY LA +YTHFTSP+RRY DL HR L AA+ E ++
Sbjct: 806 GTQTYD-EFRHYGLASEIYTHFTSPIRRYADLQAHRQLAAAIGYEAVH 852
>gi|156845640|ref|XP_001645710.1| hypothetical protein Kpol_1043p42 [Vanderwaltozyma polyspora DSM
70294]
gi|156116377|gb|EDO17852.1| hypothetical protein Kpol_1043p42 [Vanderwaltozyma polyspora DSM
70294]
Length = 988
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 203/606 (33%), Positives = 291/606 (48%), Gaps = 82/606 (13%)
Query: 75 INGHHPSTSDSTEKVSSSQQNDGMNAIERL---SAMISSYPTK-RPTGRVVSIIERSPRR 130
++ H +D+ E + N ++ RL +A+ + K +PT RVV+I RS R+
Sbjct: 330 LDAEHYDVNDNPENDNEVDANLIADSQRRLLAENAITAQKSNKVQPTARVVAIPRRSWRQ 389
Query: 131 DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDS 190
VG + N GG++ V+L+
Sbjct: 390 --YVGQIAPNSVDTQTGGTQN---------------------------VFVILMDKCLPK 420
Query: 191 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 250
I+ R + +V + ID W FP H + G E + + A+L E+ +
Sbjct: 421 IRIRTRRATELLSKRIVVS-IDSWPSNHKFPLGHFVRNLGGVEEAQAETEALLLEHDVEY 479
Query: 251 SGFSPESLSCLP--CVPWEVP----------QEELLSRK-DLRNFCIFTIDPSTATDLDD 297
FS + L CLP W+ P ++ LL ++ DLR+ I +IDP D+DD
Sbjct: 480 RPFSKKVLECLPEEGHDWKAPVDLKSQDAIAKDPLLQKRVDLRDKLICSIDPPGCVDIDD 539
Query: 298 ALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEV 357
AL ++L +G VGVHIADV++FV GT LD E R TSVY++ ++I MLP+LL ++
Sbjct: 540 ALHAKKLPNGHFEVGVHIADVTHFVKAGTPLDAEGASRGTSVYLVDKRIDMLPMLLGTDL 599
Query: 358 GSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNT 417
SL P VDR AFS+ W+L+ D+V ++VIRS SYE AQ ID K + T
Sbjct: 600 CSLKPYVDRFAFSVIWELDENADIVKVDFSKSVIRSREAFSYEQAQLRIDDKNQTDEL-T 658
Query: 418 LGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPY 476
LG +++L ++S LK KR GAL L + + V + E P
Sbjct: 659 LG------------------MRALLDLSIKLKQKRLDAGALNLASPEVKVHMDSETSDPG 700
Query: 477 DSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP---NMRKLREFEAFC 533
+ + N L EEFMLLAN + A I +FP +A+LRRH AP N L E
Sbjct: 701 EVEIKKLLATNSLVEEFMLLANISVARKIYDSFPQTAMLRRHAAPPSTNFEILNEM--LQ 758
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDT 592
+ GL + SS SL++ +K KD Y F+ L+ +TR M A YF SG + +
Sbjct: 759 KRKGLSISLESSKALADSLDRCVDK-KDPY--FNTLVRIMSTRCMMAAQYFYSGAYS-YS 814
Query: 593 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR-----RMLPKNNHRE 647
D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR M+ KN +R
Sbjct: 815 DFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLDLSHRDKNKMEMICKNINRR 874
Query: 648 GVRGRF 653
+F
Sbjct: 875 HRNAQF 880
>gi|406605933|emb|CCH42570.1| exosome complex exonuclease [Wickerhamomyces ciferrii]
Length = 984
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 196/619 (31%), Positives = 298/619 (48%), Gaps = 90/619 (14%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PTGRVV I++RS W +Y G + + + T
Sbjct: 369 QPTGRVVGIVKRS--------------WRSYVG-------------QIVENSVSKQTTNS 401
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
K + ++ + LP I+ + + ++V A ID WN S P+ H + G
Sbjct: 402 AKSCFVKLMDRSLP-RIRIKTRRAQELLGQKIVIA-IDSWNITSKNPEGHFVKSLGAADT 459
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE-----------LLSRKDLRN 281
V + A+L E+ + FS L CLP W+VP++ L RKD R+
Sbjct: 460 VGAETEALLLEHDVEYRPFSKNVLDCLPKEGHDWKVPEDLTDETVLKADPLLPKRKDFRD 519
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL ++L +G VGVHIADV++FV G+ALD E R TSVY+
Sbjct: 520 KLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKAGSALDAEGASRGTSVYL 579
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ ++I MLP+LL ++ SL P V+R AFS+ W+L+ ++++ +++I+S SYE
Sbjct: 580 VDKRIDMLPMLLGTDLCSLKPYVERFAFSVIWELDDDANIINVDYNKSIIKSREAFSYEQ 639
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ ID K + + T+G +++L +SK LK +R GAL L
Sbjct: 640 AQLRIDDKSN-QDELTVG------------------MRALLHLSKKLKQQRLDAGALNLA 680
Query: 462 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
+ + V + E P + + + N L EEFMLLAN + A I FP +A+LRRH A
Sbjct: 681 SPEVKVHMDSETSDPGEVEIKKLLETNSLVEEFMLLANISVARKIFNEFPQTAMLRRHAA 740
Query: 521 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 576
P N KL + K + + SS SL++ + KD+Y F+ L+ +TR
Sbjct: 741 PPSTNFEKLNDMLRI--KKNMSVSLESSKALADSLDRCIDP-KDEY--FNTLVRIMSTRC 795
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
M A YF SG + ++ HY LA +YTHFTSP+RRY D+V HR L AA+ E L H
Sbjct: 796 MMAAEYFSSGSY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAAAISYEPLDLTH 854
Query: 637 R-----RMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREA-------------LSVAAL 678
R ++ KN ++ +F + + ++ E+ + V
Sbjct: 855 RDKTKMELICKNINKRHRNAQFAGRASIEYYVGQVMKNNESTETGYVIRVFSNGIVVLVP 914
Query: 679 KYGVPCADILVNVATHCND 697
K+GV L ++ +H ND
Sbjct: 915 KFGVESLIKLEDITSHVND 933
>gi|365989884|ref|XP_003671772.1| hypothetical protein NDAI_0H03560 [Naumovozyma dairenensis CBS 421]
gi|343770545|emb|CCD26529.1| hypothetical protein NDAI_0H03560 [Naumovozyma dairenensis CBS 421]
Length = 1012
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 191/541 (35%), Positives = 270/541 (49%), Gaps = 73/541 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV+I RS W Y G P+ +Q T
Sbjct: 398 QPTARVVAITRRS--------------WRQYVGQI------------APNSVDLQTGGTQ 431
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ ++++ K LP I+ R ++ +V + ID W + +P H + G
Sbjct: 432 NVF--VILMDKCLP-KIRIRTRRAHDLLDKRIVIS-IDSWPTDQKYPLGHFVRDLGGIET 487
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVP----------QEELLS-RKDLRN 281
E + A+L E+ + FS + L CLP W+ P ++ LL+ RKDLR+
Sbjct: 488 AEAETEALLLEHDVEYRPFSKKVLECLPAEGHEWKAPASLTDPASLAKDPLLANRKDLRD 547
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL ++L +G VGVHIADV++FV GTALD E R TSVY+
Sbjct: 548 KLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKQGTALDAEGASRGTSVYL 607
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ ++I MLP+LL ++ SL P VDR AFS+ W+L+S D+V ++VI+S SYE
Sbjct: 608 VDKRIDMLPMLLGTDLCSLKPYVDRFAFSVLWELDSNADIVKVDFTKSVIKSREAFSYEQ 667
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ ID D ++ L +G +++L ++S LK KR +GAL L
Sbjct: 668 AQLRID---DPNQTDDLTQG----------------MRALLQLSIKLKQKRLDNGALNLA 708
Query: 462 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
+ + V + E P + + N L EEFMLLAN + A I AFP +A+LRRH A
Sbjct: 709 SPEVKVHMDSETSDPGEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAA 768
Query: 521 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 576
P N L E + + + SS SL++ E KD Y F+ L+ +TR
Sbjct: 769 PPSTNFELLNEM--LHRRKNMSISLESSKALADSLDRC-EDPKDPY--FNTLVRIMSTRC 823
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L H
Sbjct: 824 MMAAQYFYSGAYS-YPDFKHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLSH 882
Query: 637 R 637
R
Sbjct: 883 R 883
>gi|347832029|emb|CCD47726.1| similar to exosome complex exonuclease exoribonuclease (Rrp44)
[Botryotinia fuckeliana]
Length = 996
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 282/582 (48%), Gaps = 72/582 (12%)
Query: 65 EMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSII 124
++IE E +N + +D E V + ++ + + + + +PT RVV ++
Sbjct: 335 KIIEEET---LNKDENADADEGEAVVTEKERRALQEEVKKTHSKGTENRPQPTARVVGVV 391
Query: 125 ERSPRR-DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVL 183
+R+ R+ G V +V+Q S K +K ++ + L P + PK+ V
Sbjct: 392 KRNWRQYVGHVDESSVSQ-------SVKQGRKQQT---------VFLIPMDKRIPKIRVR 435
Query: 184 VKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQI 239
+ + + KR V ID W+ +S +P H + G +G E E
Sbjct: 436 TRQAGEILGKR------------VLVTIDSWDRDSRYPVGHFVRSLGELETKGAETE--- 480
Query: 240 NAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
A+L E + F L CLP VP V +R+DLR I +IDP
Sbjct: 481 -ALLLEYDVQYRPFPKTVLDCLPAEGHDWIVPPSVDDPGWKNRRDLRGLNICSIDPIGCQ 539
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++ ++I MLP+LL
Sbjct: 540 DIDDALHARPLPNGNYEVGVHIADVSHFVKPNNAMDAEASIRGTTVYLVDKRIDMLPMLL 599
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
++ SL P V+R AFS W++ ++V+ ++VI+S SYE AQ +D D
Sbjct: 600 GTDLCSLKPYVERYAFSCLWEITPDAEIVNSEYTKSVIKSREAFSYEDAQKRVD---DAS 656
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEY 472
+ + L +I++L +SK K KR GAL L + + V + E
Sbjct: 657 AQDEL----------------TTNIRTLLMLSKKFKQKRMDAGALSLSSPEVKVEMESET 700
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EA 531
P D D L EEFMLLAN + A I AFP +A+LRRH AP E
Sbjct: 701 SDPIDIKQKKHLDTMSLVEEFMLLANTSVAAKIYSAFPQTAMLRRHAAPPKTNFEELANQ 760
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
K GL+L SS + +L+ + + F+ L+ ATR M A YFCSG +
Sbjct: 761 LKVKRGLELKVGSSRELADTLDGCVDPAEP---FFNTLVRIMATRCMMSAEYFCSGT-QA 816
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
++ HY LA +YTHFTSP+RRY DLV HR L AA++ E L
Sbjct: 817 YPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIDYEPL 858
>gi|170095541|ref|XP_001878991.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646295|gb|EDR10541.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1000
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 179/529 (33%), Positives = 256/529 (48%), Gaps = 69/529 (13%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVPDREYIQLT 171
K+PTGR+V +I+R+ W Y S N +SLS+ + + T
Sbjct: 374 KQPTGRIVGVIKRN--------------WRAYVCHIDSTSLTSSNATSLSL---QTVFAT 416
Query: 172 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
P P++ + + P I ++ + ID W+ S +P+ H + G+
Sbjct: 417 PVSRLLPRIRLRTRQAPILIGQK------------ILVTIDRWDTTSRYPEGHFVRALGK 464
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE-----ELLSRKDLRNFCI 284
E + ++L E + F L CLP W VP + E R+DLR I
Sbjct: 465 VESKEAEQESLLLEFEVPYRPFGKAILDCLPPQGEQWVVPPKSPDSPEWKDREDLRGLII 524
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL +L +G GVHIADVS+FV P +D EA R T+VY++ +
Sbjct: 525 CSIDPPNCQDIDDALHARKLPNGNIEAGVHIADVSHFVHPDNPMDSEAASRGTTVYLVDK 584
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP LL + SL P V+RLAFS W++ ++V+ ++VI S +YE AQ
Sbjct: 585 RIDMLPSLLGTNLCSLRPFVERLAFSAIWEMTPEAEIVNVRFTKSVIASKAAFTYEEAQI 644
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
D + ++ +SI+ L ++ LK R GAL L + +
Sbjct: 645 RKDDP-------------------HQQDELTQSIRLLNSLALKLKAGRMAAGALNLASPE 685
Query: 465 PVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---P 519
D E P D + N L EEFMLLAN + A I FP +A+LRRH P
Sbjct: 686 VKIQLDTSESSDPIDVEQKELRETNSLVEEFMLLANISVARKIQETFPQTAVLRRHLPPP 745
Query: 520 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 578
N KL++ + G++LD SSSG SL+ + + F+ L+ ATR M
Sbjct: 746 RTNFEKLQDI--LMKRKGMKLDVSSSGALAASLDLC---VDPELPAFNTLVRIMATRCML 800
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
A YFCSG DT +GHY LA P+YTHFTSP+RRY D++ HR L AA+
Sbjct: 801 SAEYFCSGSVARDT-FGHYGLASPIYTHFTSPIRRYADVLAHRQLAAAI 848
>gi|407036449|gb|EKE38169.1| exosome complex exonuclease, putative [Entamoeba nuttalli P19]
Length = 901
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 195/653 (29%), Positives = 297/653 (45%), Gaps = 103/653 (15%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PTG++V II+R+ W G ++++ + S+ + PT
Sbjct: 312 KPTGKIVGIIKRN--------------WKPLPGYIKQESSGSYST-------NLLFLPTD 350
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
++P P IK R A + + + ID W+ S +P H + G G+
Sbjct: 351 KRFP---------PIRIKAR---DPAKLASQRILVLIDAWDTTSKYPTGHYVATLGNVGD 398
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 294
+ AIL + I F L CLP +P+E+ ++ L R D R + +IDP TD
Sbjct: 399 KASETEAILELHEIPHYEFPEIVLKCLPVLPFEITEDYLKGRYDFRKENVCSIDPPGCTD 458
Query: 295 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 354
+DDAL + L +G +GVHIADVS FV P TALD EA R T+VY+ R+I MLP L+
Sbjct: 459 IDDALHCKILPNGNYEIGVHIADVSCFVKPHTALDEEASKRGTTVYLADRRIDMLPKPLT 518
Query: 355 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 414
E + S+ D L FS+ W+L+ +V++ + ++ S +Y AQ +ID K
Sbjct: 519 EVICSITQNTDTLTFSVVWELDKDANVINCTYHKGIVHSYRAYAYGQAQAVIDDK----- 573
Query: 415 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT 474
SN S+ + ++++ +SK LK KR GAL L +S+ DE
Sbjct: 574 SNQ--------------SEYAQQLRAMLMLSKKLKQKRIDAGALMLASSEIKIEKDEQFN 619
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + N + EE+MLLAN A+ I AFP A+LRRHP P+
Sbjct: 620 PIGVKEYQTYETNSMVEEYMLLANVWVAKKIYDAFPHCAMLRRHPPPDEHTFEWLANVLK 679
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
G LD SSS +SL++ +D V+ I+ TR MQ A YF SG F + ++
Sbjct: 680 HKGKSLDFSSSKALSESLDKC--GTNEDPVIGKIMRILVTRCMQQAKYFSSGYFSYN-EF 736
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFL 654
HY LA +YTHFTSP+RRY D++VHR L A+ +++
Sbjct: 737 RHYGLAAEIYTHFTSPIRRYADVMVHRLLAQAIGFDQI---------------------- 774
Query: 655 TGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYM 714
D S E + +A + N R ++ A ++Y
Sbjct: 775 -------DLTMSKEK------------------MKEIADNINHRHTMAQHAGRASTQMYT 809
Query: 715 WILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETT 767
I LK KEV + + V+ + + I I + +E + D+ G++ + E T
Sbjct: 810 LIFLKDKEVTV-DGYVIKVMKNGIIINIPQYGLEVIVLIDQKYGMVFDENENT 861
>gi|21673344|ref|NP_661409.1| ribonuclease II family protein [Chlorobium tepidum TLS]
gi|21646438|gb|AAM71751.1| ribonuclease II family protein [Chlorobium tepidum TLS]
Length = 720
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 192/544 (35%), Positives = 271/544 (49%), Gaps = 84/544 (15%)
Query: 112 PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLT 171
P +R G VV++IER R +VG L+ ++NR L PD+ I L
Sbjct: 123 PHQRCEGLVVNVIER--RLVTVVGTLH---------------RENRRFLLKPDQRKI-LP 164
Query: 172 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
H +P K+ + GD + EL + S QA V+ + G
Sbjct: 165 EIH------------IPLKAAKKAKAGDKVLAGELEFLK-------SGTIQARVIEILGT 205
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 291
GE + +++AI I + F PE L+ V + E+L R D+R+ +FTIDP
Sbjct: 206 AGESQVEVSAIARGLGIDET-FEPELLTFAEKVREAITDEDLKERLDIRDKDVFTIDPVD 264
Query: 292 ATDLDDALSIERLSDGIS-RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
A D DDALSIE L +G +VGVHIADVS++V +ALD EA+ R+TSVY++ R IPMLP
Sbjct: 265 AKDFDDALSIETLGNGGGYKVGVHIADVSHYVPENSALDKEARKRATSVYLVDRVIPMLP 324
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 410
LSE+V SLNPGVDRLAFS+F+++ G+V +TVI S + +YE Q I+D
Sbjct: 325 SRLSEKVCSLNPGVDRLAFSVFFNITKKGEVTKFEFHKTVIHSKRRFTYEDVQQILDA-- 382
Query: 411 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 470
G+G D R +++L ++SK ++ +R G L E + F
Sbjct: 383 --------GKG-----------DYFRELQALDQLSKKIRAQRMESGGLEFETEEVRFKLG 423
Query: 471 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALLRRHPAPNMR 524
G P + + R D + L EEFMLLAN+T A + + P + R H AP M
Sbjct: 424 SNGEPVEVIKKERLDSHRLIEEFMLLANRTVAAYLTARYAENEKNPHPVIYRVHGAPQME 483
Query: 525 KLREFEAFCSKHGLQLDTSSSGQ-----FHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 578
K++ +F K G L G+ ++L + +K++ V F L+N R M
Sbjct: 484 KVQVLASFVRKIGFDLKLDRKGKDSATVSSKALRELLQKVRGTNVEF--LVNELVLRSMS 541
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRR 638
A Y D GH+ L F YTHFTSP+RRYPDL+VHR L E E K R+
Sbjct: 542 KAVYSPLND-------GHFGLGFEHYTHFTSPIRRYPDLIVHRIL---FEYETTRKKRRK 591
Query: 639 MLPK 642
+ P+
Sbjct: 592 VTPE 595
>gi|213963000|ref|ZP_03391259.1| ribonuclease R [Capnocytophaga sputigena Capno]
gi|213954341|gb|EEB65664.1| ribonuclease R [Capnocytophaga sputigena Capno]
Length = 743
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 158/433 (36%), Positives = 232/433 (53%), Gaps = 32/433 (7%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VP 265
V RI++W ++S P V + G+ GE ++++IL E + + PE + +
Sbjct: 204 VIVRIEDWKDKSDSPMGVVEQILGKPGEQTTEMHSILAEYGLPYT--YPEEVEAFAKKLD 261
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
+ EE+ R+D+R FTIDP A D DDALS + L +G +GVHIADVS++V G
Sbjct: 262 LSITDEEIARRRDMRQTLNFTIDPRDAKDFDDALSFKVLENGNYEIGVHIADVSHYVKEG 321
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
T LD EA R+TSVY++ R +PMLP +L SL P D+ FS +++N +VVD W
Sbjct: 322 TILDEEAYNRATSVYLVDRVVPMLPEILCNFACSLRPDEDKYTFSAVFEMNKKAEVVDIW 381
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--------VVRS 437
IGRTV S + +YE AQ +I+ +GEG+ + + +D VV +
Sbjct: 382 IGRTVTHSSFRFAYEEAQSVIE-------QAKVGEGYT-IPAETSITDKERAVPANVVEA 433
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 497
I +L +++ L+ KR GA+ + + F DE G P ++ N L EEFMLLA
Sbjct: 434 ILTLNTLAEKLRSKRMRLGAITFDKVEVKFDLDENGNPTGVYFKESKEANKLIEEFMLLA 493
Query: 498 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 557
N+ AE +A+ + + R H P+ KL++F A S+ G L+ ++ SL E
Sbjct: 494 NRKVAEYVAK-MKKTFVYRVHDEPDADKLQQFNAVISRFGYSLNLNNRQTTTDSLNNLLE 552
Query: 558 KL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
++ K + L D L A R M A+Y + GHY LAF YTHFTSP+RRYP
Sbjct: 553 EVKGKKEQNLVDTL---AIRSMAKATYTTK-------NIGHYGLAFDYYTHFTSPIRRYP 602
Query: 616 DLVVHRTLNAALE 628
D++VHR L L+
Sbjct: 603 DVMVHRLLQLYLD 615
>gi|154490007|ref|ZP_02030268.1| hypothetical protein PARMER_00236 [Parabacteroides merdae ATCC
43184]
gi|423723010|ref|ZP_17697163.1| ribonuclease R [Parabacteroides merdae CL09T00C40]
gi|154089449|gb|EDN88493.1| ribonuclease R [Parabacteroides merdae ATCC 43184]
gi|409241840|gb|EKN34607.1| ribonuclease R [Parabacteroides merdae CL09T00C40]
Length = 726
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 233/436 (53%), Gaps = 42/436 (9%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP 269
RI EW EE+ P V+ + G G+ + ++NAIL E + + + +P
Sbjct: 208 RITEWPEEAKNPLGEVVDILGTAGDNDAEMNAILAEFDLPYK-YPANVEKAAEKISDAIP 266
Query: 270 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 329
+EE+ R+D R FTIDP A D DDALS +L +G VGVHIADV+Y+V P + +D
Sbjct: 267 EEEIAKREDFRGVTTFTIDPKDAKDFDDALSARKLDNGNWEVGVHIADVTYYVKPESLID 326
Query: 330 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 389
EA R+TSVY++ R IPMLP L ++ SL P ++L FS+ ++LN ++ I RT
Sbjct: 327 REAFSRATSVYLVDRTIPMLPERLCNQICSLRPNEEKLCFSVIFELNKNAEIQQSHITRT 386
Query: 390 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 449
+I+S + +YE AQ +I+ GEG E+ + + ++ L ++ L+
Sbjct: 387 IIKSDRRFTYEEAQAVIE----------TGEG--------EYKEEILALNGL---AQKLR 425
Query: 450 DKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA- 508
D+RF DGA+ + + F DE G P + + ++ N L EEFMLLAN+T AE I ++
Sbjct: 426 DRRFKDGAIAFDRYEVKFDIDENGKPLGTYIKESKEANKLIEEFMLLANRTVAEFIGKSK 485
Query: 509 --FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKLKD 561
+ + R H P+ KLR+F AF S+ G ++ T S ++ L+ + K ++
Sbjct: 486 NKTKKTFVYRIHEQPDPEKLRDFSAFISRFGYKMRTEGTKTDISKGINKLLDSVQGKPEE 545
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+ V A R MQ A Y + GHY LA YTHFTSP+RRYPD++VHR
Sbjct: 546 NLVE-----TLAIRSMQKAHYTTD-------NIGHYGLAMDYYTHFTSPIRRYPDMMVHR 593
Query: 622 TLNAALEAEKLYWKHR 637
L L + K++
Sbjct: 594 LLERYLAGGRSVIKNK 609
>gi|393780515|ref|ZP_10368727.1| ribonuclease R [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392608243|gb|EIW91098.1| ribonuclease R [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 743
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 157/433 (36%), Positives = 230/433 (53%), Gaps = 32/433 (7%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVP 265
V RI++W ++S P V + G+ GE ++++IL E + + PE + +
Sbjct: 204 VIVRIEDWKDKSDSPMGVVEQILGKPGEQTTEMHSILAEYGLPYT--YPEEVEAFAKNLD 261
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
+ EE+ R+D+R FTIDP A D DDALS + L +G +GVHIADVS++V G
Sbjct: 262 LSITDEEIARRRDMRETLTFTIDPRDAKDFDDALSFKVLENGNYEIGVHIADVSHYVKEG 321
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
T LD EA R+TSVY++ R +PMLP +L SL P D+ FS +++N +VVD W
Sbjct: 322 TILDEEAYNRATSVYLVDRVVPMLPEILCNFACSLRPDEDKYTFSAVFEMNKKAEVVDIW 381
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--------VVRS 437
IGRTV S + +YE AQ +I+ +GEG+ + + +D VV +
Sbjct: 382 IGRTVTHSSFRFAYEEAQSVIE-------QAKVGEGYT-IPAETSITDKERAVPAEVVEA 433
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 497
I +L +++ L+ KR GA+ + + F DE G P ++ N L EEFMLLA
Sbjct: 434 ILTLNTLAEKLRGKRMRLGAITFDKVEVKFDLDENGNPTGVYFKESKEANKLIEEFMLLA 493
Query: 498 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 557
N+ AE +A+ + + R H P+ KL++F ++ G LD + SL E
Sbjct: 494 NRKVAEYVAK-MKKTFVYRVHDEPDAEKLQQFNTVINRFGYSLDLKNRQTTTDSLNNLLE 552
Query: 558 KL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
++ K + L D L A R M A+Y + GHY LAF YTHFTSP+RRYP
Sbjct: 553 EVKGKKEQNLVDTL---AIRSMAKATYTTK-------NIGHYGLAFDYYTHFTSPIRRYP 602
Query: 616 DLVVHRTLNAALE 628
D++VHR L L+
Sbjct: 603 DVMVHRLLQLYLD 615
>gi|47213260|emb|CAF92921.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1074
Score = 256 bits (653), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 186/552 (33%), Positives = 271/552 (49%), Gaps = 70/552 (12%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTGRVV I++R+ RD +V F P RE Q P
Sbjct: 312 PTGRVVGILQRN-WRDYVVTF--------------------------PPREGPQSQGRGP 344
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
K+ V + +P I+ ++ DA ++ V RID W S +P H++ V GR GE+
Sbjct: 345 KHVLTVPWDRRIP-KIRVGTQQADA-LQGHRVVVRIDSWESTSQYPNGHMVRVLGRAGEL 402
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCIFTIDPS 290
E +I +L EN I S FS L +P PW V ++ +R+DLR + +F+IDP
Sbjct: 403 ETEIQTVLVENGIHLSPFSDAQLREMPVSSPERPWRVDPDQAAARRDLRESHLVFSIDPR 462
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
D+DDALS+ RL G+ +GVHIADV++FV G+ D+EA++R+T+ Y+ R+ MLP
Sbjct: 463 GCEDVDDALSVRRLDGGLLELGVHIADVTHFVKEGSLTDVEARLRATTYYLADRRYDMLP 522
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV-DRWIGRTVIRSCCKLSYEHAQDIIDGK 409
+LS ++ SL GV R A S+ W L++ V D W GRTVIRS +L YE AQ +++G+
Sbjct: 523 PVLSSDLCSLLGGVGRYAMSVMWQLDAHTLAVKDVWFGRTVIRSSYQLHYELAQALLNGE 582
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
E G G + + + + ++++ L +V++ L+ R GAL LE +
Sbjct: 583 -QAEVPELAGLGPEERDARL--AKLTQALEMLTQVARRLRAHRDRGGALELEGVEVRAQL 639
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
D+ V +++ E M+ AN A I AFP ALLRRHP P +
Sbjct: 640 DKDKNITALVPRQPLEVHETVAECMIHANHWVARRIQEAFPHQALLRRHPPPRQEVFGQL 699
Query: 530 EAFCSKHGLQLDT----------------------------SSSGQFHQSLEQAREKLKD 561
+ G + T S+ + +SL++A +
Sbjct: 700 VDSAAAKGFAITTRHTFSPRGGCLPLNLQRMSPLIFCFYLCRSNKELAESLDRAVD--PQ 757
Query: 562 DYVLFDILINYATRPMQLASYFCSG--DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
D ++ +L AT M A YF +G D D HY LA YTHFTSP+RRY D+VV
Sbjct: 758 DALVNRLLRMMATSAMSQALYFSTGAQDQAQDQYQYHYGLALEKYTHFTSPIRRYADMVV 817
Query: 620 HRTLNAALEAEK 631
HR L AA+ EK
Sbjct: 818 HRLLAAAISLEK 829
>gi|256819668|ref|YP_003140947.1| ribonuclease R [Capnocytophaga ochracea DSM 7271]
gi|256581251|gb|ACU92386.1| ribonuclease R [Capnocytophaga ochracea DSM 7271]
Length = 742
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 158/433 (36%), Positives = 232/433 (53%), Gaps = 32/433 (7%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VP 265
V RI++W ++S P V + G+ GE ++++IL E + + PE + +
Sbjct: 204 VIVRIEDWKDKSDSPMGVVEQILGKPGEQTTEMHSILAEYGLPYT--YPEEVEAFAKKLD 261
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
+ EE+ R+D+R FTIDP A D DDALS + L +G +GVHIADVS++V G
Sbjct: 262 LSITDEEIARRRDMRENLTFTIDPRDAKDFDDALSFKLLENGNYEIGVHIADVSHYVKEG 321
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
T LD EA R+TSVY++ R +PMLP +L SL P D+ FS +++N +VVD W
Sbjct: 322 TILDEEAYNRATSVYLVDRVVPMLPEVLCNFACSLRPDEDKYTFSAVFEMNKKAEVVDIW 381
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--------VVRS 437
IGRTV S + +YE AQ +I+ +GEG+ + + +D VV +
Sbjct: 382 IGRTVTHSSFRFAYEEAQSVIE-------QAKVGEGYT-IPAETSITDKERAIPAEVVEA 433
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 497
I +L +++ L+ KR GA+ + + F DE G P ++ N L EEFMLLA
Sbjct: 434 ILTLNTLAEKLRRKRMRLGAITFDKVEVKFDLDENGNPTGVYFKESKEANKLIEEFMLLA 493
Query: 498 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 557
N+ AE +A+ + + R H P+ KL++F A S+ G L+ ++ SL E
Sbjct: 494 NRKVAEYVAK-MKKTFVYRVHDEPDADKLQQFNAVISRFGYSLNLNNRQTTTDSLNNLLE 552
Query: 558 KL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
++ K + L D L A R M A+Y + GHY LAF YTHFTSP+RRYP
Sbjct: 553 EVKGKKEQNLVDTL---AIRSMAKATYTTK-------NIGHYGLAFEYYTHFTSPIRRYP 602
Query: 616 DLVVHRTLNAALE 628
D++VHR L L+
Sbjct: 603 DVMVHRLLQLYLD 615
>gi|255534171|ref|YP_003094542.1| Ribonuclease R [Flavobacteriaceae bacterium 3519-10]
gi|255340367|gb|ACU06480.1| Ribonuclease R [Flavobacteriaceae bacterium 3519-10]
Length = 718
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 154/430 (35%), Positives = 228/430 (53%), Gaps = 35/430 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V ++ +W P+ ++ V G GE E +I++IL E + S F E +
Sbjct: 194 VVVKMTDWKSGEKNPEGEIIKVLGAPGEHETEIHSILAEYGLPYS-FPAEVEKEADDIDR 252
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+ E+ R+D+R C FTIDP A D DDALSI++L++G +GVHIADVS++V PGT
Sbjct: 253 TIHDSEVAKRRDMRGICTFTIDPKDAKDFDDALSIQKLNNGNWEIGVHIADVSHYVQPGT 312
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R +PMLP +LS +V SL P D+ FS ++++ DVV+ W
Sbjct: 313 LLDDEAYDRATSVYLVDRVVPMLPEVLSNDVCSLRPNEDKYTFSAVFEMDENADVVNEWF 372
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
GRTVI S + +YE AQ+ I+ G G D+ I +L ++K
Sbjct: 373 GRTVIHSDRRFAYEEAQERIE----------TGTG-----------DLAEEILTLDRLAK 411
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
IL+ +R +GA+ + S+ F DE P +D N L EEFMLLAN+ +E I+
Sbjct: 412 ILRKERIRNGAITFDRSEVRFNLDENSEPIGVYFKISKDSNHLIEEFMLLANRKVSEFIS 471
Query: 507 ---RAFP--DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
+ P ++ + R H P+ KL F G Q+D +++ + +SL + + +K
Sbjct: 472 LNRKGEPTANTFIYRIHDDPDPTKLEALRDFVGTFGYQMDLANTKKVAESLNRLLQDVKG 531
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+++ A R M A Y + GHY L F Y+HFTSP+RRYPDL+ HR
Sbjct: 532 KGEE-NMIETLAMRSMSKAVYSTNP-------IGHYGLGFDFYSHFTSPIRRYPDLIAHR 583
Query: 622 TLNAALEAEK 631
L L+ K
Sbjct: 584 LLQHYLDGGK 593
>gi|361127237|gb|EHK99212.1| putative Exosome complex exonuclease dis3 [Glarea lozoyensis 74030]
Length = 1241
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 183/532 (34%), Positives = 262/532 (49%), Gaps = 67/532 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV +I+R+ R+ VG ++ + K AK++R ++ + L P
Sbjct: 629 QPTARVVGVIKRNWRQ--YVGHVD-------ESSVSKSAKESRK------QQTVFLIPMD 673
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK+ V + + + KR V ID W+ +S P H + G
Sbjct: 674 KRIPKIRVRTRQAGEIVGKR------------VLVTIDSWDRDSRHPVGHFVRSLGDLET 721
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDLRNFCI 284
+G E E A+L E + F L CLP VP R+DLR+ I
Sbjct: 722 KGAETE----ALLLEYDVQYRPFPKAVLDCLPAEGHDWIVPPSTDDPGWKDRRDLRHLEI 777
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++ +
Sbjct: 778 CSIDPIGCQDIDDALHARPLPNGNYEVGVHIADVSHFVKPNNAMDAEASIRGTTVYLVDK 837
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP+LL ++ SL P ++R AFS W++ ++V ++VI+S SYE AQ
Sbjct: 838 RIDMLPMLLGTDLCSLKPYIERYAFSAIWEMTPDAEIVKSEFTKSVIKSREAFSYEQAQI 897
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
+D K + D+ +I++L +SK K KR GAL L + +
Sbjct: 898 RVDDK-------------------SQQDDLTTAIRTLLMLSKKFKQKRMDAGALSLSSPE 938
Query: 465 -PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
V + E P D D L EEFMLLAN + A I AFP +A+LRRH AP
Sbjct: 939 VRVEMESETSDPIDIKTKKHLDTMSLVEEFMLLANTSVAAKIYEAFPQTAMLRRHGAPPK 998
Query: 524 RKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
E +K L L ++S + SL+ + + F+ L+ ATR M A
Sbjct: 999 TNFEELANQLKTKRNLDLRMATSKELADSLDTCVDPKEP---FFNTLVRIMATRCMMSAE 1055
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
YFCSG + ++ HY LA +YTHFTSP+RRY DLV HR L AA++ E L+
Sbjct: 1056 YFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIDYEPLH 1106
>gi|315225125|ref|ZP_07866942.1| ribonuclease R [Capnocytophaga ochracea F0287]
gi|420159399|ref|ZP_14666202.1| ribonuclease R [Capnocytophaga ochracea str. Holt 25]
gi|314944808|gb|EFS96840.1| ribonuclease R [Capnocytophaga ochracea F0287]
gi|394762233|gb|EJF44499.1| ribonuclease R [Capnocytophaga ochracea str. Holt 25]
Length = 743
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 158/433 (36%), Positives = 232/433 (53%), Gaps = 32/433 (7%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VP 265
V RI++W ++S P V + G+ GE ++++IL E + + PE + +
Sbjct: 204 VIVRIEDWKDKSDSPMGVVEQILGKPGEQTTEMHSILAEYGLPYT--YPEEVEAFAKKLD 261
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
+ EE+ R+D+R FTIDP A D DDALS + L +G +GVHIADVS++V G
Sbjct: 262 LSITDEEIARRRDMRETLTFTIDPRDAKDFDDALSFKVLENGNYEIGVHIADVSHYVKEG 321
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
T LD EA R+TSVY++ R +PMLP +L SL P D+ FS +++N +VVD W
Sbjct: 322 TILDEEAYNRATSVYLVDRVVPMLPEVLCNFACSLRPDEDKYTFSAVFEMNKKAEVVDIW 381
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--------VVRS 437
IGRTV S + +YE AQ +I+ +GEG+ + + +D VV +
Sbjct: 382 IGRTVTYSSFRFAYEEAQSVIE-------QAKVGEGYT-IPAKTSITDKERSVPAEVVEA 433
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 497
I +L +++ L+ KR GA+ + + F DE G P ++ N L EEFMLLA
Sbjct: 434 ILTLNALAEKLRGKRMRLGAITFDKVEVKFDLDENGNPTGVYFKESKEANKLIEEFMLLA 493
Query: 498 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 557
N+ AE +A+ + + R H P+ KL++F A S+ G L+ ++ SL E
Sbjct: 494 NRKVAEYVAK-MKKTFVYRVHDEPDADKLQQFNAVISRFGYSLNLNNRQTTTDSLNNLLE 552
Query: 558 KL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
++ K + L D L A R M A+Y + GHY LAF YTHFTSP+RRYP
Sbjct: 553 EVKGKKEQNLVDTL---AIRSMAKATYTTK-------NIGHYGLAFDYYTHFTSPIRRYP 602
Query: 616 DLVVHRTLNAALE 628
D++VHR L L+
Sbjct: 603 DVMVHRLLQLYLD 615
>gi|399925993|ref|ZP_10783351.1| ribonuclease R [Myroides injenensis M09-0166]
Length = 639
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 173/518 (33%), Positives = 259/518 (50%), Gaps = 56/518 (10%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
K+P VV IIER + VG + + +KN + ++ D
Sbjct: 45 KKPEAEVVEIIERYKTQ--FVGVIEI--------------QKNFAFVATAD--------- 79
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
PKM + +P +GD +V I++W +++ P V+ V G+ G
Sbjct: 80 ----PKMYTDIF-IPKDKVGEARDGD------VVVVEIEDWLDKADSPFGKVVKVLGKQG 128
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
E +I+AIL E + F E + + EE+ RKD+R+ FTIDP A
Sbjct: 129 EHNTEIHAILAEYGLPYD-FPKEVEDFANKLDTSINDEEVSKRKDMRDVLTFTIDPKDAK 187
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D DDALS +L +G +G+HIADVS++V GT LD EA R+TS+Y++ R IPMLP +L
Sbjct: 188 DFDDALSFRKLENGNYEIGIHIADVSHYVQEGTKLDEEAYNRATSIYLVDRTIPMLPEVL 247
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S SL P D+ FS ++LN ++V++W GRTV S +++YE AQ II+ K
Sbjct: 248 SNFACSLRPNEDKFTFSALFELNDKAEIVNKWFGRTVTHSDQRMAYEEAQHIIETKESTI 307
Query: 414 SSNTLGEGWPQLYGQFEWS-DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
G Q E S +V ++ L +++KIL+ KR DGA+ + + F DE
Sbjct: 308 PKEISLTGEVQ-----EISPEVTEAVLKLNDLAKILRAKRMGDGAISFDKIEVKFNLDEN 362
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF 532
P ++ N L EEFMLLAN+ +E I + + + R H P+ KL +A
Sbjct: 363 DIPTGVFFKEAKEANHLIEEFMLLANRKVSEFIGKQ-KKTFVYRVHDEPDEEKLLGLQAV 421
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKD 590
++ G +++ + G +SL + + + K + L D L R M ASY +
Sbjct: 422 IARFGHKINLKTKGGISKSLNKLLKDVNGKKEQNLVDTL---TIRCMSKASYSTN----- 473
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
+ GHY LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 474 --NIGHYGLAFDYYSHFTSPIRRYPDVMAHRLLQHYLD 509
>gi|420150804|ref|ZP_14657959.1| ribonuclease R [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394751368|gb|EJF35141.1| ribonuclease R [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 743
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 229/425 (53%), Gaps = 16/425 (3%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VP 265
V RI++W ++S P V + G+ GE ++++IL E + + PE + +
Sbjct: 204 VIVRIEDWKDKSDSPMGVVEQILGKPGEQTTEMHSILAEYGLPYT--YPEEVEAFAKKLD 261
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
+ +EE+ R+D+R FTIDP A D DDALS + L +G +GVHIADVS++V G
Sbjct: 262 LSITEEEIARRRDMRETLTFTIDPRDAKDFDDALSFKVLENGNYEIGVHIADVSHYVKEG 321
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
T LD EA R+TSVY++ R +PMLP +L SL P D+ FS +++N +VVD W
Sbjct: 322 TILDEEAYNRATSVYLVDRVVPMLPEILCNFACSLRPDEDKYTFSAVFEMNKKAEVVDIW 381
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 445
IGRTV S + +YE AQ +I+ E E + ++VV +I +L ++
Sbjct: 382 IGRTVTHSSFRFAYEEAQSVIEQAKVGEEYTIPAETSIIDKERAVPAEVVEAILTLNTLA 441
Query: 446 KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI 505
+ L+ KR GA+ + + F DE G P ++ N L EEFMLLAN+ AE +
Sbjct: 442 EKLRGKRMRLGAITFDKVEVKFDLDENGNPTGVYFKESKEANKLIEEFMLLANRKVAEYV 501
Query: 506 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDY 563
A+ + + R H P+ KL++F A S+ G L+ ++ SL E++ K +
Sbjct: 502 AK-MKKTFVYRVHDEPDADKLQQFNAVISRFGYSLNLNNRQTTTDSLNNLLEEVKGKKEQ 560
Query: 564 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
L D L A R M A+Y + GHY LAF YTHFTSP+RRYPD++VHR L
Sbjct: 561 NLVDTL---AIRSMAKATYTTK-------NIGHYGLAFDYYTHFTSPIRRYPDVMVHRLL 610
Query: 624 NAALE 628
L+
Sbjct: 611 QLYLD 615
>gi|402495166|ref|ZP_10841899.1| ribonuclease R [Aquimarina agarilytica ZC1]
Length = 739
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 229/432 (53%), Gaps = 22/432 (5%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
ELV +D+W E++ P V V G GE E +I+AIL + + F + +
Sbjct: 189 ELVLVSMDDWPEKADSPFGTVKEVLGTPGEHETEIHAILLQYGLPYE-FPKKVEEYANKL 247
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
+ +EE+ R+D+R+ FTIDP A D DDALS + L +G +G+HIADVS++V P
Sbjct: 248 DTSIQKEEIAKRRDMRDTLTFTIDPKDAKDFDDALSFKTLKNGNYEIGIHIADVSHYVKP 307
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
GT LD EA R+TSVY++ R +PMLP +LS SL P ++ FS +++ +V+
Sbjct: 308 GTILDDEAYERATSVYLVDRVVPMLPEVLSNNACSLRPHEEKYTFSAVFEITPNTKIVNE 367
Query: 385 WIGRTVIRSCCKLSYEHAQDIID-GKFDVESSNTL-GEGWPQLYGQFEWSDVVRSIKSLY 442
W GRTV S + +YE AQ II+ G+ + +S +L GE + +++ ++ L
Sbjct: 368 WFGRTVTYSDARFAYEEAQQIIETGESTIPASISLTGEAYQA------SAEITEAVLKLD 421
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
E++K++++ R GAL + ++ F +E P +D N L EEFMLLANK A
Sbjct: 422 ELAKVMREARMKSGALSFDKTEVKFQLNENNEPTGVFFKTSKDANKLIEEFMLLANKKVA 481
Query: 503 EVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK- 560
E I + P + R H PN KL + S+ G L+ + SL + +K
Sbjct: 482 EFIGKQTPKKTFVYRIHDEPNEEKLVALQNIVSQFGHSLNLQNKKTVTSSLNKLLSDVKG 541
Query: 561 -DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
+ + D L A R M A Y + GHY L+F Y+HFTSP+RRYPD++
Sbjct: 542 QKEQNMVDTL---AIRTMSKAVYTTQ-------NIGHYGLSFDYYSHFTSPIRRYPDVMA 591
Query: 620 HRTLNAALEAEK 631
HR L L+A K
Sbjct: 592 HRLLQHYLDAGK 603
>gi|218258472|ref|ZP_03474839.1| hypothetical protein PRABACTJOHN_00494 [Parabacteroides johnsonii
DSM 18315]
gi|423342570|ref|ZP_17320284.1| ribonuclease R [Parabacteroides johnsonii CL02T12C29]
gi|218225444|gb|EEC98094.1| hypothetical protein PRABACTJOHN_00494 [Parabacteroides johnsonii
DSM 18315]
gi|409217487|gb|EKN10463.1| ribonuclease R [Parabacteroides johnsonii CL02T12C29]
Length = 726
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 156/426 (36%), Positives = 224/426 (52%), Gaps = 42/426 (9%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP 269
RI EW EE+ P V+ + G GE ++NAIL E + + + +P
Sbjct: 208 RITEWPEEAKNPLGEVVDILGTAGENNAEMNAILAEFNLPYK-YPVNVEKAAEKISEAIP 266
Query: 270 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 329
+EE+ R+D R FTIDP A D DDALS +L +G VGVHIADV+Y+V P + +D
Sbjct: 267 EEEIAKREDFRGITTFTIDPKDAKDFDDALSARKLDNGNWEVGVHIADVTYYVKPESLID 326
Query: 330 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 389
EA R+TSVY++ R IPMLP L ++ SL P ++L FS ++LN +V I RT
Sbjct: 327 REAFSRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSAVFELNKDAEVQQSHITRT 386
Query: 390 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 449
+I+S + +YE AQ +I+ GEG D I L +++ L+
Sbjct: 387 IIKSDRRFTYEEAQVVIE----------TGEG-----------DYKEEILMLNSMAQKLR 425
Query: 450 DKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA- 508
D+RF DGA+ + + F DE G P + + ++ N L EEFMLLAN+T AE + ++
Sbjct: 426 DRRFKDGAIAFDRYEVKFDIDENGKPLGTYIKESKEANKLIEEFMLLANRTVAEFVGKSK 485
Query: 509 --FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKLKD 561
+ + R H P+ KLR+F AF S+ G ++ T S ++ L+ + K ++
Sbjct: 486 NRTKKTFVYRIHEQPDPEKLRDFSAFISRFGYKMRTEGTKTDISKGINKLLDNVQGKPEE 545
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+ V A R MQ A Y + GHY LA YTHFTSP+RRYPD++VHR
Sbjct: 546 NLVE-----TLAIRSMQKAHYTTD-------NIGHYGLAMDYYTHFTSPIRRYPDMMVHR 593
Query: 622 TLNAAL 627
L L
Sbjct: 594 LLERYL 599
>gi|156062888|ref|XP_001597366.1| hypothetical protein SS1G_01560 [Sclerotinia sclerotiorum 1980]
gi|154696896|gb|EDN96634.1| hypothetical protein SS1G_01560 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 998
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 185/531 (34%), Positives = 259/531 (48%), Gaps = 67/531 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV +++R+ R+ VG ++ + SRK ++ + L P
Sbjct: 382 QPTARVVGVLKRNWRQ--YVGHVDESSVSQSVKQSRK-------------QQTVFLIPMD 426
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK+ V + + + KR V ID W+ +S +P H + G
Sbjct: 427 KRIPKIRVRTRQAGEILGKR------------VLVTIDSWDRDSRYPVGHFVRSLGELET 474
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDLRNFCI 284
+G E E A+L E + F L CLP VP +R+DLR I
Sbjct: 475 KGAETE----ALLLEYDVQYRPFPKAVLDCLPAEGHDWIVPPSTDDPGWKNRRDLRGLNI 530
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++ +
Sbjct: 531 CSIDPIGCQDIDDALHARPLPNGNYEVGVHIADVSHFVKPNNAMDAEASIRGTTVYLVDK 590
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP+LL ++ SL P V+R AFS W++ ++V+ ++VI+S SYE AQ
Sbjct: 591 RIDMLPMLLGTDLCSLKPYVERYAFSCLWEITPDAEIVNAEYTKSVIKSREAFSYEDAQK 650
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
+D D + L +I++L +SK K KR GAL L + +
Sbjct: 651 RVD---DASQQDEL----------------TTNIRTLLMLSKKFKQKRMDAGALSLSSPE 691
Query: 465 -PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
V + E P D D L EEFMLLAN + A I AFP +A+LRRH AP
Sbjct: 692 VKVEMESETSDPIDIKQKKHLDTMSLVEEFMLLANTSVAAKIYSAFPQTAMLRRHAAPPK 751
Query: 524 RKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
E K GL+L SS Q SL+ + + F+ L+ ATR M A
Sbjct: 752 TNFEELANQLKVKRGLELKVGSSRQLADSLDGCVDPTEP---FFNTLVRIMATRCMMSAE 808
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
YFCSG + ++ HY LA +YTHFTSP+RRY DLV HR L AA++ E L
Sbjct: 809 YFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIDYEPL 858
>gi|149239608|ref|XP_001525680.1| exosome complex exonuclease RRP44 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451173|gb|EDK45429.1| exosome complex exonuclease RRP44 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 990
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 171/491 (34%), Positives = 251/491 (51%), Gaps = 42/491 (8%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
++++ K LP I+ R + + +V +D W +S +P H + G E +
Sbjct: 419 VILMDKTLP-KIRIRTRKAKEYLGQRIVVV-VDSWPSDSKYPNGHFVRALGDVESAEAET 476
Query: 240 NAILYENAICCSGFSPESLSCLPCV--PWEVPQ------EELLSRKDLRNFCIFTIDPST 291
A+L E+ + FS L CLP W VP ++L R DLR+ + +IDP
Sbjct: 477 EALLLEHDVEYRPFSKNVLDCLPKEGDNWVVPDITNTTDKQLQKRVDLRDKLVCSIDPPN 536
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
D+DDAL ++L +G VGVHIADV++FV GTALD E R TS Y++ ++I MLP+
Sbjct: 537 CVDIDDALHAQKLPNGNFEVGVHIADVTHFVKAGTALDQEGASRGTSTYLVDKRIDMLPM 596
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
LL + SL P VDR AFS+ W++++ ++++ +++I+S SYE AQ ID D
Sbjct: 597 LLGTNLCSLKPFVDRFAFSVIWEVDAEANIINVKFMKSIIKSRQAFSYEQAQARID---D 653
Query: 412 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFD 470
+ L E S++ L +SK LK KR GAL L + + V++
Sbjct: 654 ATQKDELTE----------------SMRILLRLSKKLKQKRIDAGALNLASPEVKVYMDS 697
Query: 471 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFE 530
E P + + + N L EEFML AN + A I A+P +A+LRRH AP
Sbjct: 698 ETSDPQEVEIKKLLETNSLVEEFMLFANISVARKIYDAYPQTAMLRRHAAPPATNFETLN 757
Query: 531 AFCS--KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGD 587
+ K+GL + SS SL++ + D Y F+ LI +TR M A YF SG
Sbjct: 758 DMLNVRKNGLSISLESSKALADSLDRCIDP-TDPY--FNTLIRIMSTRCMMAAEYFPSGS 814
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR-----RMLPK 642
+ ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR M+ K
Sbjct: 815 Y-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHRDKHKMEMIVK 873
Query: 643 NNHREGVRGRF 653
N ++ +F
Sbjct: 874 NINKRHRNAQF 884
>gi|351715235|gb|EHB18154.1| Exosome complex exonuclease RRP44 [Heterocephalus glaber]
Length = 986
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 183/551 (33%), Positives = 261/551 (47%), Gaps = 116/551 (21%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG-SRKDAKKNRSSLSVPDREYIQLTPT 173
+PTGRVV II+R+ W Y G S+ D K++R L TP
Sbjct: 363 KPTGRVVGIIKRN--------------WRPYCGMLSKSDIKESRRHL---------FTPA 399
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDAT-IEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ P++ R+E A+ +E + ID W S +P H + G
Sbjct: 400 DKRIPRI-------------RIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDV 446
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE E + +L E+ + FS LS LP +PW + + +L +R+DLR+ C+ ++DP
Sbjct: 447 GEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWSITENDLKNREDLRHLCVCSVDPPGC 506
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
TD+DDAL L +G VGVHIADVS+F+ PG ALD E+ R T+VY+ +++I M+P L
Sbjct: 507 TDIDDALHCRELKNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPEL 566
Query: 353 LSEEVGSLNPGVD-----------------------------RLAFSIFWDLNSAGDVVD 383
LS + SL VD RLAFS W++N +++
Sbjct: 567 LSSNLCSLRCNVDRYLCMLFHKNVVFTILTGSHQQILSVFTHRLAFSCIWEMNHNAEILK 626
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
++VI S L+Y AQ ID S T+ + D+ S++ L +
Sbjct: 627 TRFTKSVINSKASLTYAEAQMRID-------SATMND------------DITTSLRGLNK 667
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++KILK R GAL L + + F D E P D + N + EEFMLLAN + A
Sbjct: 668 LAKILKKGRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLLANISVA 727
Query: 503 EVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
+ I F +KH L++ T ++ SL++A E
Sbjct: 728 KKIHEGF------------------------AKHNLEIKTDTAKSLADSLDRA-ESPAFP 762
Query: 563 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
Y L +L ATR M A YFCSG D D+ HY LA P+YTHFTSP+RRY D++VHR
Sbjct: 763 Y-LNTLLRILATRCMMQAVYFCSG---MDNDFHHYGLASPIYTHFTSPIRRYADIIVHRL 818
Query: 623 LNAALEAEKLY 633
L A+ A+ Y
Sbjct: 819 LAVAIGADCTY 829
>gi|124003005|ref|ZP_01687856.1| ribonuclease R [Microscilla marina ATCC 23134]
gi|123991655|gb|EAY31063.1| ribonuclease R [Microscilla marina ATCC 23134]
Length = 736
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 223/429 (51%), Gaps = 38/429 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V + EW+ E P A V V G G E +++AI+ E + F E L +
Sbjct: 206 VIVEVLEWHNEKNSPVAKVKEVLGAPGVNETEMHAIMAEFGLA-RHFPAEVLKDAEKIRG 264
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+ + E+ R+D+R FTIDP A D DDALSI++L +G +G+HIADV+++V P +
Sbjct: 265 RITKVEIKKRRDIRETLTFTIDPENAKDFDDALSIKKLDNGNWEIGIHIADVTHYVKPDS 324
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
+D E R+TSVY++ R +PMLP LS E+ SL P D+L FS ++L+ V+ W
Sbjct: 325 KVDKEGAERATSVYLVDRVVPMLPERLSNELCSLRPHEDKLTFSAMFELDENAHVIKEWF 384
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
GRTVI S + SYE AQ+++D G G D V +++L ++K
Sbjct: 385 GRTVIHSDRRFSYEEAQEVMDS----------GNG-----------DHVDELRTLNALAK 423
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI- 505
L +RF GA+ E + F DE GTP R+D + L EEFMLLAN+ AE +
Sbjct: 424 KLTAQRFEKGAMSFETVEVKFKLDENGTPIGLYTKERKDAHKLIEEFMLLANRKVAEFVF 483
Query: 506 ------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 559
+A ++ + R H PN+ KL+ F F K G ++ + +SL + +
Sbjct: 484 KLPVKGTKAESNTMVYRTHDDPNVEKLKNFSGFAKKLGHEVKLNGKA-MTRSLNKLMTDI 542
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
+D ++L A R M A Y GH+ LAF YTHFTSP+RRYPD++V
Sbjct: 543 -EDTPQQNVLQGLAIRTMAKAIYTTEA-------TGHFGLAFDHYTHFTSPIRRYPDMMV 594
Query: 620 HRTLNAALE 628
HR L L+
Sbjct: 595 HRLLQHYLD 603
>gi|229495883|ref|ZP_04389609.1| ribonuclease R [Porphyromonas endodontalis ATCC 35406]
gi|229317196|gb|EEN83103.1| ribonuclease R [Porphyromonas endodontalis ATCC 35406]
Length = 736
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 182/556 (32%), Positives = 261/556 (46%), Gaps = 74/556 (13%)
Query: 84 DSTEKVSSSQQNDGMNAIERLSAMISSYPTK---RPTGRVVSIIERSPRRDGIVGFLNVN 140
D + +V S +N+ +A+ ++ +P K TG+VV +++R RR VG + V
Sbjct: 121 DESAEVIVSDRNNPEHALPGDRVRVALFPLKARRTRTGQVVEVLQR--RRSTYVGRVVVT 178
Query: 141 QWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA 200
+ F+Y L DR ++L ++ K D
Sbjct: 179 KGFSY--------------LHTEDR----------ALDSRILLPREALAGAKN----NDK 210
Query: 201 TIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSC 260
I RI W P P V+ V G G+ +++AIL E + S + E+
Sbjct: 211 AI------VRIAHWGAREPEPTGEVVEVLGAAGDNNTEMHAILAEYDLPYS-YPEEAEEA 263
Query: 261 LPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 320
+P E+P EE+ R+D R TIDP+ A D DDALS +L G+ VGVHIADVSY
Sbjct: 264 ARQIPSEIPSEEMAKREDFREVFTLTIDPADAKDFDDALSWRKLEGGLVEVGVHIADVSY 323
Query: 321 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGD 380
+V PG+ +D EA R+TS+Y++ R IPMLP L ++ SL P RLAFS + LN A +
Sbjct: 324 YVTPGSVIDKEAYDRATSIYLVDRTIPMLPERLCNDLCSLRPNEARLAFSCVFVLNEAAE 383
Query: 381 VVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKS 440
V IGRT+I S + +YE AQ +ID K EG D I S
Sbjct: 384 VQSYRIGRTIIESNRRYAYEEAQQVIDTK----------EG-----------DDAEVILS 422
Query: 441 LYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKT 500
L+ ++++L+ +RF GA+ + + F+ D G P D + N L EEFMLLAN+T
Sbjct: 423 LHSLAQLLRKRRFAQGAINFSSQEVQFVLDAEGRPVDVMARPHGTANELIEEFMLLANRT 482
Query: 501 AAEVIARAFPDSA------LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 554
A + +S + R H P+ KL + AF + G Q ++
Sbjct: 483 VATEFGKKQRNSNGDAKTFIYRIHDLPDGDKLNQMGAFIRRFGYQFKNATEASAISKNLN 542
Query: 555 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 614
A + D ++ A R M A Y + GHY LAF YTHFTSP+RRY
Sbjct: 543 AVIEASQDKPEATLIQTMAVRTMARAEYSTE-------NIGHYGLAFEYYTHFTSPIRRY 595
Query: 615 PDLVVHRTLNAALEAE 630
PDL+VHR + + E
Sbjct: 596 PDLLVHRLVARYMAGE 611
>gi|167387139|ref|XP_001738038.1| exosome complex exonuclease RRP44 [Entamoeba dispar SAW760]
gi|165898904|gb|EDR25648.1| exosome complex exonuclease RRP44, putative [Entamoeba dispar
SAW760]
Length = 901
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 174/513 (33%), Positives = 251/513 (48%), Gaps = 55/513 (10%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PTG++V II+R+ W G ++++ N S+ + PT
Sbjct: 312 KPTGKIVGIIKRN--------------WKPLPGYIKQESSGNYST-------NLLFLPTD 350
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
++P P IK R A + + + ID W+ S +P H + G G+
Sbjct: 351 KRFP---------PIRIKAR---DPAKLASQRILVLIDAWDTTSKYPTGHYVATLGNVGD 398
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 294
+ AIL + I F L CLP +P+E+ + L R D R + +IDP TD
Sbjct: 399 KASETEAILELHEIPHYEFPEIVLKCLPLLPFEITDDYLKGRYDFRKENVCSIDPPGCTD 458
Query: 295 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 354
+DDAL + L +G +GVHIADVS FV P TALD EA R T+VY+ R+I MLP L+
Sbjct: 459 IDDALHCKILPNGNYEIGVHIADVSCFVKPHTALDEEAAKRGTTVYLADRRIDMLPKPLT 518
Query: 355 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 414
E + S+ D L FS+ W+L+ +V++ + ++ S +Y AQ +ID K
Sbjct: 519 EVICSITQNTDTLTFSVVWELDKNANVINCTYHKGIVHSYRAYAYGQAQAVIDDK----- 573
Query: 415 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT 474
SN S+ + ++ + +SK LK KR GAL L +S+ DE
Sbjct: 574 SNQ--------------SEYAQQLRVMLMLSKKLKQKRIDAGALMLASSEIKIEKDEQFN 619
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS 534
P + N + EE+MLLAN A+ I AFP A+LRRHP P+
Sbjct: 620 PIGVKEYQTYETNSMVEEYMLLANVWVAKKIYDAFPHCAMLRRHPPPDEHTFEWLANVLK 679
Query: 535 KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDW 594
G LD SSS +SL++ +D V+ I+ TR MQ A YF SG F + ++
Sbjct: 680 HKGKSLDFSSSKALSESLDKC--GTNEDPVVGRIMRILVTRCMQQAKYFSSGYFSYN-EF 736
Query: 595 GHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
HY LA +YTHFTSP+RRY D++VHR L A+
Sbjct: 737 RHYGLAAEIYTHFTSPIRRYADVMVHRLLAQAI 769
>gi|376316415|emb|CCF99807.1| ribonuclease R [uncultured Flavobacteriia bacterium]
Length = 736
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 262/527 (49%), Gaps = 62/527 (11%)
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 172
+K+ G +V I+ER + + VG + + + F + S + K R+ + VP
Sbjct: 131 SKKHEGEIVEILER--KTEEFVGVIQMQKNFAFVNTSAEG--KMRTDVFVP--------- 177
Query: 173 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
K ++ GDA + E V +I++W E++ P V+ V G
Sbjct: 178 -------------------KNKI--GDAK-DGEKVLVKIEDWPEKADSPFGKVIKVLGMP 215
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE +I++IL + + F E + + ++E+ R+D+R+ FTIDP A
Sbjct: 216 GEHNTEIHSILAQYGLPHD-FPKEVEDYANNIDTSIKEDEIKKRRDMRDVLTFTIDPKDA 274
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D DDALS ++L +G +G+HIADVS++V+PGT LD EA R+TSVY++ R +PMLP +
Sbjct: 275 KDFDDALSFQKLENGNYEIGIHIADVSHYVVPGTILDDEAYERATSVYLVDRVVPMLPEI 334
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDII---DG 408
LS SL P ++ FS ++L+ S+G V+D+W GRTV S + +YE AQ II +G
Sbjct: 335 LSNNACSLRPNEEKYTFSAVFELDKSSGKVLDQWFGRTVTYSDARFAYEEAQHIIETREG 394
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSD-VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
E S T E + +D +V + L ++KI++ +R +GA+ + + F
Sbjct: 395 TIPAEISLTGKE--------YTSTDAIVEATIELDRLAKIMRKQRMKNGAISFDKVEVKF 446
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR-HPAPNMRKL 526
DE P +D N L EEFMLLANK AE I + P + R H PN KL
Sbjct: 447 NLDEDNEPVGVFFKSSKDANKLIEEFMLLANKKVAEFIGKQTPKKTFVYRIHDEPNDEKL 506
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFC 584
+ + G +++ SL + K + L D L R M A Y
Sbjct: 507 AALQTIAGRFGYKMNYKDRKSTTASLNNLLSDVAGKKEQNLIDTL---TIRTMSKAVYST 563
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
+ GHY LAF Y+HFTSP+RRYPD++VHR L L+ K
Sbjct: 564 D-------NIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQHYLDQGK 603
>gi|429746220|ref|ZP_19279585.1| ribonuclease R [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429166804|gb|EKY08756.1| ribonuclease R [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 742
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 157/433 (36%), Positives = 230/433 (53%), Gaps = 32/433 (7%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VP 265
V RI++W ++S P V + G+ GE ++++IL E + + PE + +
Sbjct: 204 VIVRIEDWKDKSDSPMGVVEQILGKPGEQTTEMHSILAEYGLPYT--YPEEVEAFAKKLD 261
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
+ EE+ R+D+R FTIDP A D DDALS + L +G +GVHIADVS++V G
Sbjct: 262 LSITDEEIARRRDMRETLTFTIDPRDAKDFDDALSFKVLENGNYEIGVHIADVSHYVKEG 321
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
T LD EA R+TSVY++ R +PMLP +L SL P D+ FS +++N +VVD W
Sbjct: 322 TILDEEAYNRATSVYLVDRVVPMLPEILCNFACSLRPDEDKYTFSAVFEMNKKAEVVDIW 381
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--------VVRS 437
IGRTV S + +YE AQ +I+ +GEG+ + + +D VV +
Sbjct: 382 IGRTVTHSSFRFAYEEAQSVIE-------QAKVGEGYT-IPAETSITDKERSVPAEVVDA 433
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 497
I +L +++ L+ KR GA+ + + F DE G P ++ N L EEFMLLA
Sbjct: 434 ILTLNTLAEKLRGKRMRLGAITFDKVEVKFDLDENGNPTGVYFRESKEANKLIEEFMLLA 493
Query: 498 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 557
N+ AE +A+ + + R H P+ KL++F ++ G LD + SL E
Sbjct: 494 NRKVAEYVAK-MKKTFVYRVHDEPDAEKLQQFNTVINRFGYSLDLKNRQTTTDSLNNLLE 552
Query: 558 KL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
++ K + L D L A R M A+Y + GHY LAF YTHFTSP+RRYP
Sbjct: 553 EVKGKKEQNLVDTL---AIRSMAKATYTTK-------NIGHYGLAFDYYTHFTSPIRRYP 602
Query: 616 DLVVHRTLNAALE 628
D++VHR L L+
Sbjct: 603 DVMVHRLLQLYLD 615
>gi|406862703|gb|EKD15752.1| RNB domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 994
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 185/531 (34%), Positives = 258/531 (48%), Gaps = 67/531 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT +VV +++R+ R+ VG ++ + SRK ++ + L P
Sbjct: 382 QPTAKVVGVVKRNWRQ--YVGHVDESSVSQSIKQSRK-------------QQTVFLIPMD 426
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK+ V + + + KR V ID W+ +S +P H + G
Sbjct: 427 KRIPKIRVRTRQAGEIVGKR------------VLVTIDSWDRDSRYPIGHFVRSLGELET 474
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLP------CVPWEVPQEELLSRKDLRNFCI 284
+G E E A+L E + F L CLP VP R+DLR I
Sbjct: 475 KGAETE----ALLLEYDVQYRPFPKTVLDCLPKEGHDWIVPPSTDDPGWKDRRDLRGLQI 530
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL L +G VGVHIADVS+FV P A+D EA +R T+VY++ +
Sbjct: 531 CSIDPIGCQDIDDALHARPLPNGNFEVGVHIADVSHFVKPNNAMDAEASIRGTTVYLVDK 590
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP+LL ++ SL P V+R AFS W++ ++V ++VI+S SYE AQ
Sbjct: 591 RIDMLPMLLGTDLCSLKPYVERYAFSAIWEITPDAEIVKSDFTKSVIKSREAFSYEEAQL 650
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
ID + + T +I++L +SK K KR GAL L + +
Sbjct: 651 RIDNPANNDELTT-------------------NIRTLLMLSKKFKQKRMDAGALSLSSPE 691
Query: 465 -PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
V E P D D L EEFMLLAN + A I AFP +A+LRRH AP
Sbjct: 692 VRVETESETSDPIDIKTKKHLDTMSLVEEFMLLANTSVAAKIYSAFPQTAMLRRHGAPPK 751
Query: 524 RKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
E K GL+L TSSS + SL+ + + F+ L+ ATR M A
Sbjct: 752 TNFEELGNQLKVKRGLELRTSSSKELADSLDGC---VDPNEPFFNTLVRIMATRCMMSAE 808
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
YFCSG + ++ HY LA +YTHFTSP+RRY DLV HR L AA++ E L
Sbjct: 809 YFCSGT-QAYPEFTHYGLASEIYTHFTSPIRRYADLVAHRQLAAAIDYEPL 858
>gi|412987920|emb|CCO19316.1| predicted protein [Bathycoccus prasinos]
Length = 1147
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 173/528 (32%), Positives = 269/528 (50%), Gaps = 53/528 (10%)
Query: 118 GRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKY 177
+VV I++R+ R G L++ + +++ +N + + + P K
Sbjct: 491 AKVVRIVKRNWRDRGYACALDIESCADLARKQHENSNENETEDGGGRAKRVLCVPNDRKT 550
Query: 178 PKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEP 237
PK+ + + I + + ID W SP+P+ H + G GE
Sbjct: 551 PKIRINTRHA------------HQIASQRIVVVIDAWLASSPYPEGHFVRALGEIGETAS 598
Query: 238 QINAILYENAICCSGFSPESLSCLPCVPWEVPQE--ELLSRKDLRNFCIFTIDPSTATDL 295
+ A+L E + F+P C+P +PW+V +E E R+DLRN + ++DP D+
Sbjct: 599 ETAALLLEADVDDRPFAPAVHKCVPPLPWKVTEEHIEEPKREDLRNLRVCSVDPPGCRDI 658
Query: 296 DDALSI-------ERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
DDALS + +GVHIADV+ F+ PGT +D EA R T+ Y++QR++ M
Sbjct: 659 DDALSAVVVPKNDGVEGEEEIEIGVHIADVTTFLKPGTPMDDEALRRGTTTYLVQRRLDM 718
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSA-----GDVVDRWIGRTVIRSCCKLSYEHAQ 403
LP L+E++ SL V+RLAFS+FW ++ A DV R+ +++I+S L+Y+ AQ
Sbjct: 719 LPKPLTEDICSLRADVERLAFSVFWRVDPATMLPRKDVKPRFT-KSIIKSSKALTYQKAQ 777
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+IID + + + SD+ ++ L +VSK L+ KR GAL L +
Sbjct: 778 EIIDDETN------------------DKSDLANDLRRLRDVSKALRAKRMEQGALTLASP 819
Query: 464 KPVF-LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
+ F L DE P D L + N + EE MLLAN AE I+ +P ALLRRHP P
Sbjct: 820 EVRFELDDETSNPLDVSLYISRETNKMVEEMMLLANIAVAERISEHYPSFALLRRHPEPR 879
Query: 523 MRKLREFEAFCSKHGLQ--LDTSSSGQFHQSLEQAREKLKDDYVLFDILINY-ATRPMQL 579
+ GL+ ++ +S+ +SL+ +++D F+ L+ ATR M
Sbjct: 880 EKMFLPLLETVQLLGLENKINCASNKTLAESLDAC---VREDDPYFNTLLRLQATRCMST 936
Query: 580 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
A Y +G F + + HY LA P+YTHFTSP+RRY D++VHR L+A+L
Sbjct: 937 AKYCSTGSFPRNELY-HYGLASPLYTHFTSPIRRYADVIVHRLLSASL 983
>gi|423346443|ref|ZP_17324131.1| ribonuclease R [Parabacteroides merdae CL03T12C32]
gi|409220261|gb|EKN13217.1| ribonuclease R [Parabacteroides merdae CL03T12C32]
Length = 726
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 232/436 (53%), Gaps = 42/436 (9%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP 269
RI EW EE+ P V+ + G G+ ++NAIL E + + + +P
Sbjct: 208 RITEWPEEAKNPLGEVVDILGTAGDNNAEMNAILAEFDLPYK-YPANVEKAAEKISDAIP 266
Query: 270 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 329
+EE+ R+D R FTIDP A D DDALS +L +G VGVHIADV+Y+V P + +D
Sbjct: 267 EEEIAKREDFRGVTTFTIDPKDAKDFDDALSARKLDNGNWEVGVHIADVTYYVKPESLID 326
Query: 330 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 389
EA R+TSVY++ R IPMLP L ++ SL P ++L FS+ ++LN ++ I RT
Sbjct: 327 REAFSRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSVIFELNKNAEIQQSHITRT 386
Query: 390 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 449
+I+S + +YE AQ +I+ GEG E+ + + ++ L ++ L+
Sbjct: 387 IIKSDRRFTYEEAQAVIE----------TGEG--------EYKEEILALNGL---AQKLR 425
Query: 450 DKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA- 508
D+RF DGA+ + + F DE G P + + ++ N L EEFMLLAN+T AE I ++
Sbjct: 426 DRRFKDGAIAFDRYEVKFDIDENGKPLGTYIKESKEANKLIEEFMLLANRTVAEFIGKSK 485
Query: 509 --FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKLKD 561
+ + R H P+ KLR+F AF S+ G ++ T S ++ L+ + K ++
Sbjct: 486 NKTKKTFVYRIHEQPDPEKLRDFSAFISRFGYKMRTEGTKTDISKGINKLLDSVQGKPEE 545
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+ V A R MQ A Y + GHY LA YTHFTSP+RRYPD++VHR
Sbjct: 546 NLVE-----TLAIRSMQKAHYTTD-------NIGHYGLAMDYYTHFTSPIRRYPDMMVHR 593
Query: 622 TLNAALEAEKLYWKHR 637
L L + K++
Sbjct: 594 LLERYLAGGRSVIKNK 609
>gi|380483240|emb|CCF40746.1| mitotic control protein dis3 [Colletotrichum higginsianum]
Length = 567
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 173/467 (37%), Positives = 235/467 (50%), Gaps = 44/467 (9%)
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + +P+ + KRL LV ID W+ +S +P H + G
Sbjct: 4 RIPKIKLRSRQVPELLGKRL----------LVT--IDAWDRDSRYPVGHFVRSLGELETK 51
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE----ELLSRKDLRNFCIFTIDP 289
+ A+L E+ + F L CLP W VPQ R+DLR I +IDP
Sbjct: 52 AAETEALLLEHDVQYRPFPKTVLDCLPKEGHDWRVPQNLEDPGWRDREDLRKLLICSIDP 111
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
D+DD L L +G VGVHIADVS+FV PG A+D EA +R TSVY++ ++I ML
Sbjct: 112 IGCQDIDDTLHARPLPNGNFEVGVHIADVSHFVKPGNAMDTEASLRGTSVYLVDKRIDML 171
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P+LL ++ SL P V+R AFS+ W++N D+V ++VI+S SYE AQ +D
Sbjct: 172 PMLLGTDLCSLKPYVERYAFSVIWEMNPNADIVGARFTKSVIQSKEAFSYEAAQLRVD-- 229
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 468
+ D+ SI++L +SK LK KR GAL L + + V +
Sbjct: 230 -----------------DASQQDDLTNSIRTLMMLSKKLKQKRMDAGALSLSSPEVKVQM 272
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 528
E P D D L EEFMLLAN + A I AFP +A+LRRH AP E
Sbjct: 273 ESETSDPIDVKTKQHLDTMSLVEEFMLLANVSVASKIYEAFPQTAILRRHGAPPKTNFDE 332
Query: 529 F-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 586
K GL+L SS SL+ + F+ L+ ATR M A YFCSG
Sbjct: 333 LSNQLRVKKGLELRVDSSKALADSLDNCVDPADP---FFNTLVRIMATRCMMSAEYFCSG 389
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
+ ++ HY LA +YTHFTSP+RRY DLV HR L A + E ++
Sbjct: 390 T-QAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAXIGYEAIH 435
>gi|403214808|emb|CCK69308.1| hypothetical protein KNAG_0C01950 [Kazachstania naganishii CBS
8797]
Length = 996
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 192/562 (34%), Positives = 277/562 (49%), Gaps = 78/562 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RPT RVV+I RS W Y G P+ +Q T
Sbjct: 382 RPTARVVAITRRS--------------WRQYVGQI------------APNSVDLQTAGTQ 415
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ ++++ K LP I+ R ++ +V + +D W +P H + G
Sbjct: 416 NVF--IILMDKCLP-KIRIRTRRAAELLDKRVVIS-VDSWPANYKYPLGHFVRDLGTIES 471
Query: 235 VEPQINAILYENAICCSGFSPESLSCLP--CVPWEVP----------QEELLS-RKDLRN 281
+ + A+L E+ + FS + L CLP W+ P + LL+ RKDLR+
Sbjct: 472 AQAETEALLLEHDVEYRPFSKKVLECLPEEGHDWKAPVSVDDIEANKADPLLAKRKDLRD 531
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E R TSVY+
Sbjct: 532 KLICSIDPPGCVDIDDALHAKKLPNGHWEVGVHIADVTHFVKPGTALDAEGASRGTSVYL 591
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ ++I MLP+LL ++ SL P VDR AFS+ W+L+ D+++ ++VIRS +YE
Sbjct: 592 VDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDENADIINVEFHKSVIRSREAFAYEQ 651
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ ID D + + L G +++L ++S LK KR GAL L
Sbjct: 652 AQLRID---DPKQQDELTLG----------------MRALLQLSIKLKQKRLEAGALNLA 692
Query: 462 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH-- 518
+ + V + E P + + N L EEFMLLAN + A I +FP +A+LRRH
Sbjct: 693 SPEVKVHMDSETSDPGEVEIKKLLATNSLVEEFMLLANISVARKIYDSFPQTAMLRRHAP 752
Query: 519 -PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 576
PA N L E + + + SS SL++ E KD Y F+ L+ +TR
Sbjct: 753 PPATNFEILNEM--LQRRKNMSISVESSKALADSLDRC-EDPKDPY--FNTLVRIMSTRC 807
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A++ E L H
Sbjct: 808 MMAAQYFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDIVAHRQLAGAIDYEPLSLDH 866
Query: 637 R-----RMLPKNNHREGVRGRF 653
R M+ +N +R+ +F
Sbjct: 867 RDKHKMDMICRNINRKHRNAQF 888
>gi|116180372|ref|XP_001220035.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185111|gb|EAQ92579.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 987
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 181/532 (34%), Positives = 262/532 (49%), Gaps = 59/532 (11%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT +VV +++R+ R+ VG ++ + RK ++ + + P
Sbjct: 376 QPTAKVVGVVKRNWRQ--YVGHIDQSSVSQSAQQGRK-------------QDTVFVIPMD 420
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
K P++ + + + + + KR + ID W+ S P H + G
Sbjct: 421 KKIPRIRLRTRQVAELVGKR------------ILITIDAWDRGSRHPTGHFVRSLGELET 468
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCIFTID 288
+ A+L E + F L CLP W+VP+ R+DLR I +ID
Sbjct: 469 KAAETEALLLEYDVQYRPFPKTVLDCLPKEGHDWKVPESMEDPGWKDREDLRGLLICSID 528
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P D+DDAL L +G + VGVHIADVS+FV P A+D EA +R T+VYM+ ++I M
Sbjct: 529 PVGCQDIDDALHSRPLPNGNTEVGVHIADVSHFVKPNNAMDAEASIRGTTVYMVDKRIDM 588
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP+LL ++ SL P V+R AFS+ W+L+ D+V+ ++VI+S SYE AQ +D
Sbjct: 589 LPMLLGTDLCSLKPYVERYAFSVLWELSPDADIVNVRFTKSVIKSREAFSYEQAQLRVD- 647
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVF 467
+SS ++ SI++L +SK LK KR GAL L + + V
Sbjct: 648 ----DSSQN--------------DELTTSIRTLLALSKKLKQKRLDAGALSLSSPEVKVQ 689
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
+ E P D D L EEFMLLAN + A I AFP +A+LRRH AP
Sbjct: 690 MESETSDPIDVKTKVLLDTMSLVEEFMLLANVSVARKIHEAFPQTAILRRHGAPPKTNFD 749
Query: 528 EF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCS 585
E +K G+ L SS SL+ + + F+ LI ATR M A YFCS
Sbjct: 750 ELANQLRAKRGMDLSVESSRALADSLDACVDPKEP---FFNTLIRIMATRCMMAAEYFCS 806
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
G + ++ HY LA +YTHFTSP+RRY DL+ HR L AA+ E ++ R
Sbjct: 807 GT-QAYPEFRHYGLASEIYTHFTSPIRRYADLMAHRQLAAAIGYEAIHPTTR 857
>gi|429755398|ref|ZP_19288055.1| ribonuclease R [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429174656|gb|EKY16129.1| ribonuclease R [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 743
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/434 (35%), Positives = 231/434 (53%), Gaps = 32/434 (7%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VP 265
V RI++W ++S P V + G+ GE ++++IL E + + PE + +
Sbjct: 204 VIVRIEDWKDKSDSPMGVVEQILGKPGEQTTEMHSILAEYGLPYT--YPEEVEAFAKKLD 261
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
+ + +E+ R+D+R FTIDP A D DDALS + L +G +GVHIADVS++V G
Sbjct: 262 FSITDDEIARRRDMRETLTFTIDPRDAKDFDDALSFKVLENGNYEIGVHIADVSHYVKEG 321
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
T LD EA R+TSVY++ R +PMLP +L SL P D+ FS +++N +VVD W
Sbjct: 322 TILDEEAYNRATSVYLVDRVVPMLPEVLCNFACSLRPDEDKYTFSAVFEMNKKAEVVDIW 381
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--------VVRS 437
IGRTV S + +YE AQ +I+ +GEG+ + + +D VV +
Sbjct: 382 IGRTVTHSSFRFAYEEAQSVIE-------QAKVGEGYT-IPAETSITDKERAVPAEVVDA 433
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 497
I +L +++ L+ KR GA+ + + F DE G P ++ N L EEFMLLA
Sbjct: 434 ILTLNALAEKLRGKRMRLGAITFDKVEVKFDLDENGNPTGVYFKESKEANKLIEEFMLLA 493
Query: 498 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 557
N+ AE +A+ + + R H P+ KL++F ++ G LD + SL E
Sbjct: 494 NRKVAEYVAK-MKKTFVYRVHDEPDAEKLQQFNTVINRFGYSLDLKNRQTTTDSLNNLLE 552
Query: 558 KL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
++ K + L D L A R M A+Y + GHY LAF YTHFTSP+RRYP
Sbjct: 553 EVKGKKEQNLVDTL---AIRSMAKATYTTK-------NIGHYGLAFDYYTHFTSPIRRYP 602
Query: 616 DLVVHRTLNAALEA 629
D++VHR L L+
Sbjct: 603 DVMVHRLLQLYLDG 616
>gi|345867996|ref|ZP_08819992.1| ribonuclease R [Bizionia argentinensis JUB59]
gi|344047478|gb|EGV43106.1| ribonuclease R [Bizionia argentinensis JUB59]
Length = 745
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/490 (32%), Positives = 237/490 (48%), Gaps = 45/490 (9%)
Query: 166 EYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHV 225
EY+ + H Y +VV + I + + + + + V ++EW E+S P V
Sbjct: 149 EYVGVIQLHNNYAFVVVDSNKMYTDIFVPINKTNKAKDGDKVLVSLEEWPEKSDSPNGKV 208
Query: 226 LHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIF 285
+ V GR GE +I+AIL E + F E + + +EE+ R+D+R F
Sbjct: 209 IEVLGRPGEHNTEIHAILAEYGLPLE-FPKEVEDFANKIDTSITKEEIAKRRDMRKDLTF 267
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
TIDP A D DDALS E L +G+ +G+HIADVS+++ PGT LD EA R+TSVY++ R
Sbjct: 268 TIDPKDAKDFDDALSFEILDNGLYEIGIHIADVSHYLQPGTILDDEAYERATSVYLVDRV 327
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 405
+PMLP +LS SL P ++ FS + +N G+VVD W G+TV S + +YE AQ I
Sbjct: 328 VPMLPEVLSNNACSLRPNEEKYTFSAVFKMNDKGEVVDEWFGKTVTFSNARFAYEEAQAI 387
Query: 406 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS-------------------- 445
I+ ++ N + + E +D+ SI + +S
Sbjct: 388 IENNAEL---NVISKA-------VEMADIDTSIPADVAISGKDYNTTKEIAFAVLKMDAF 437
Query: 446 -KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 504
K ++ KR GA+ + + F D+ P +D N + EEFMLLAN+ +E
Sbjct: 438 AKKMRSKRMRSGAISFDKVEVKFELDKDANPIGVFFKSSKDANKMIEEFMLLANRKVSEF 497
Query: 505 IARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KD 561
+ + P+ + R H P+ KL + + G +LD SL ++
Sbjct: 498 VGKQKPEKTFIYRVHDEPDESKLASLQNVVGRFGYKLDFKDKKSISSSLNNLLSEVVGTK 557
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+ L D L R M A Y + GHY LAF Y+HFTSP+RRYPD++ HR
Sbjct: 558 EQNLVDTL---TIRTMSKAEYTTD-------NIGHYGLAFDYYSHFTSPIRRYPDIMAHR 607
Query: 622 TLNAALEAEK 631
L L+ EK
Sbjct: 608 LLQMYLDGEK 617
>gi|363581142|ref|ZP_09313952.1| ribonuclease R [Flavobacteriaceae bacterium HQM9]
Length = 739
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 157/432 (36%), Positives = 228/432 (52%), Gaps = 22/432 (5%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
ELV +D+W E++ P + V G GE E +I+AIL + + F + +
Sbjct: 189 ELVLVTMDDWPEKADSPFGTIKEVLGTPGEHETEIHAILLQYGLPYE-FPKKVEDYANQL 247
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
+ +EE+ R+D+R FTIDP A D DDALS + L +G VG+HIADVS++V P
Sbjct: 248 DTSIQKEEIAKRRDMRKTLTFTIDPKDAKDFDDALSFKILENGNYEVGIHIADVSHYVKP 307
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
GT LD EA R+TSVY++ R +PMLP +LS SL P ++ FS +++ +V+
Sbjct: 308 GTILDDEAYERATSVYLVDRVVPMLPEVLSNNACSLRPHEEKYTFSAVFEITPNAKIVNE 367
Query: 385 WIGRTVIRSCCKLSYEHAQDIID-GKFDVESSNTL-GEGWPQLYGQFEWSDVVRSIKSLY 442
W GRTVI S + +YE AQ II+ GK + ++ +L GE + S V ++I L
Sbjct: 368 WFGRTVIYSDSRFAYEEAQQIIETGKTTIPANISLTGETYEA------CSYVAQAILKLD 421
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
+++KI+++ R GAL + ++ F DE P +D N L EEFMLLANK +
Sbjct: 422 DLAKIMRNARMKSGALSFDKTEVKFKLDENNEPIGVFFKTSKDANKLIEEFMLLANKKVS 481
Query: 503 EVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK- 560
E I + P + R H PN KL + S+ G L+ + SL + +K
Sbjct: 482 EFIGKQTPKKTFVYRIHDEPNEEKLVALQNIVSQFGHSLNLQNKKTVTSSLNKLLLDVKG 541
Query: 561 -DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
+ + D L A R M A Y + GHY L+F Y+HFTSP+RRYPD++
Sbjct: 542 QKEQNMVDTL---AIRTMSKAVYTTQ-------NIGHYGLSFDYYSHFTSPIRRYPDVMA 591
Query: 620 HRTLNAALEAEK 631
HR L L+ K
Sbjct: 592 HRLLQHYLDGGK 603
>gi|224000053|ref|XP_002289699.1| ribonuclease [Thalassiosira pseudonana CCMP1335]
gi|220974907|gb|EED93236.1| ribonuclease [Thalassiosira pseudonana CCMP1335]
Length = 600
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 171/520 (32%), Positives = 259/520 (49%), Gaps = 80/520 (15%)
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
W+ +E R+D R+ +FTIDP+TA DLDDAL + +L DG +GVHIADVS+FV P
Sbjct: 132 WKPTEEMCRGRRDYRSHRVFTIDPTTARDLDDALHVTQLPDGRVEIGVHIADVSHFVQPS 191
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--- 382
+A+D EA R+T+VY++ R IPMLP L E SLN V+RLAFS+ W +N G +
Sbjct: 192 SAVDEEALRRATTVYLVDRVIPMLPRPLCEIACSLNENVERLAFSVVWRMNMDGTLSKKK 251
Query: 383 ---------DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEG----WP---QLY 426
D W GRTVI+SC +L Y AQ+IID K V ++N E WP Q
Sbjct: 252 GSAEKCKEDDIWYGRTVIKSCARLDYATAQNIIDNK--VAAANGESEVDETLWPKSRQPT 309
Query: 427 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG-TPYDSVLSGRED 485
G ++V ++ +++V+ + RF +GAL L K F ++ G TP D
Sbjct: 310 GGHTIAEVAADVRLMHQVAMKRRKLRFENGALALNGIKLTFQLEDDGETPKLCAPYPIRD 369
Query: 486 LNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP---NMRKLREF--EAFCSKHGLQL 540
N L EE+MLLAN A+ + ALLR+H P M+ + + E+F +
Sbjct: 370 SNRLIEEYMLLANFLVAQRLITHAKGRALLRQHSPPLEAGMQNVVDVSKESF----DFDI 425
Query: 541 DTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALA 600
D +SS +SL + D+ V+ + + T PM+ A Y +G+ D+ DW H+AL
Sbjct: 426 DITSSKTLQESLSRLSRTCDDELVIQCVTESLMT-PMRPAEYIAAGEVNDE-DWQHFALN 483
Query: 601 FPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYD 660
P YTHFTSP+RRY D++VHR L A L D
Sbjct: 484 IPYYTHFTSPIRRYADVIVHRLLQATL--------------------------------D 511
Query: 661 KDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKK 720
+E + ++ + A A CND+++A + ++ ++++ + LK+
Sbjct: 512 DAVSEFPQTQQEIHSA---------------ADQCNDKRMASKKAQERSDRVFLSLYLKE 556
Query: 721 KEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLI 760
+ L +G + T+++ L + R++ E E +
Sbjct: 557 HPIASVLGVCLGIGEKTFTVFVPSLGMSTRVFLQEHEDVF 596
>gi|326800487|ref|YP_004318306.1| ribonuclease R [Sphingobacterium sp. 21]
gi|326551251|gb|ADZ79636.1| ribonuclease R [Sphingobacterium sp. 21]
Length = 711
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 179/528 (33%), Positives = 257/528 (48%), Gaps = 98/528 (18%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
++ G VV IIER R G L++++ F + L DR+ +
Sbjct: 132 RKKEGEVVEIIERF--RSDFTGILSISKRFAF--------------LIADDRKML----- 170
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
H Y +P +E+ + + + V I +W + S P V HV G+ G
Sbjct: 171 HDIY---------IP------IEDLNGAKDQDKVVVTITDWPQGSKNPVGRVKHVLGKQG 215
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ-EELLS------RKDLRNFCIFT 286
E ++NAIL + GF L+ V E + EE++S RKD R+ FT
Sbjct: 216 ENNTEMNAILAD-----FGFP---LAFPTAVEQEADKIEEVISPVEISRRKDFRSVLTFT 267
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP+ A D DDA+S ++ DG VGVHIADV+++V P +ALD EA R TSVY++ R I
Sbjct: 268 IDPADAKDFDDAISFRKMPDGNYEVGVHIADVTHYVQPDSALDKEAYERGTSVYLVDRVI 327
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
PMLP LS + SL P D+L FS + ++ V ++W GRT+I S + +YE AQ+II
Sbjct: 328 PMLPERLSNNLCSLRPNEDKLCFSAVFIIDDQAHVKEQWFGRTIIHSDRRFTYEEAQEII 387
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
+ K GQF ++ L +++ IL+D++F GA+ E+++
Sbjct: 388 ENK----------------EGQFSEELLI-----LNKLAYILRDRKFKQGAINFESTEVK 426
Query: 467 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL----RRHPAPN 522
F DE G P R+D + L E+FMLLAN+ AE I + L R H APN
Sbjct: 427 FKLDENGKPLGVYTKERKDAHKLIEDFMLLANRKVAEFIGKQGKGKNKLPFVYRSHDAPN 486
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSL-------EQAREKLKDDYVLFDILINYATR 575
L F F ++ G ++ T S + +SL E +E+ ++L A R
Sbjct: 487 EESLASFAQFAARFGYKVSTKSEKEIAKSLNALMHDVEGTKEQ--------NVLTTLAIR 538
Query: 576 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
M A Y HY LAF YTHFTSP+RRYPD++VHR L
Sbjct: 539 SMAKAIYTTK-------KHSHYGLAFDYYTHFTSPIRRYPDVMVHRLL 579
>gi|367013066|ref|XP_003681033.1| hypothetical protein TDEL_0D02380 [Torulaspora delbrueckii]
gi|359748693|emb|CCE91822.1| hypothetical protein TDEL_0D02380 [Torulaspora delbrueckii]
Length = 997
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 188/541 (34%), Positives = 268/541 (49%), Gaps = 73/541 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV+I RS R+ VG + N GGS+ + +
Sbjct: 383 QPTARVVAIPRRSWRQ--YVGQIAPNSVDAKTGGSQN----------------VFVILMD 424
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
PK+ + + D + KR + +D W +P H + G
Sbjct: 425 KCLPKVRIRTRRANDLLGKR------------IVISLDSWPATHKYPLGHFVRDLGEVES 472
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE----ELLS-------RKDLRN 281
E + A+L E+ + FS + L CLP W+ P + E+++ R+DLR+
Sbjct: 473 AEAETEALLLEHDVEYRPFSKKVLECLPAEGHDWKAPADLNDPEMIAKDSLLQKRRDLRD 532
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL +RLS+G VGVHIADV++FV P TALD E R TSVY+
Sbjct: 533 KLICSIDPPGCVDIDDALHAKRLSNGNWEVGVHIADVTHFVKPNTALDAEGASRGTSVYL 592
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ ++I MLP+LL ++ SL P V+R AFS+ W+L+ ++V+ ++VI+S SYE
Sbjct: 593 VDKRIDMLPMLLGTDLCSLKPYVERFAFSVIWELDDNANIVNVDFMKSVIKSREAFSYEQ 652
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ ID D + L EG +++L ++S LK KR GAL L
Sbjct: 653 AQLRID---DPNQKDELTEG----------------MRALLQLSIKLKQKRLDAGALNLA 693
Query: 462 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
+ + V + E P + + N L EEFMLLAN + A I AFP +A+LRRH A
Sbjct: 694 SPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIFDAFPQTAMLRRHAA 753
Query: 521 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 576
P N L E ++ GL + SS SL++ + +D Y F+ L+ +TR
Sbjct: 754 PPSTNFETLNEM--LQTRKGLSISIESSKALADSLDRCIDP-QDPY--FNTLVRIMSTRC 808
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L H
Sbjct: 809 MMAAQYFYSGAYS-YADFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLDLMH 867
Query: 637 R 637
R
Sbjct: 868 R 868
>gi|163754550|ref|ZP_02161672.1| putative exoribonuclease [Kordia algicida OT-1]
gi|161325491|gb|EDP96818.1| putative exoribonuclease [Kordia algicida OT-1]
Length = 731
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/433 (36%), Positives = 225/433 (51%), Gaps = 28/433 (6%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V I++W + P +V + G+ GE + +I++IL E + F E +
Sbjct: 188 VLVEIEDWPARADSPFGNVTQILGKPGEHDTEIHSILAEYGLPYE-FPAEVEKFANKIDL 246
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+ +E+ R+D+R+ FTIDP A D DDALS + L +G +G+HIADVS++V PGT
Sbjct: 247 SIQADEIKKRRDMRDVLTFTIDPKDAKDFDDALSFQTLENGNYEIGIHIADVSHYVKPGT 306
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R +PMLP +LS SL P ++ FS +++N +V+++W
Sbjct: 307 VLDEEAYNRATSVYLVDRVVPMLPEILSNGACSLRPNEEKYTFSAVFEINKKAEVLNQWF 366
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP---QLYGQFEWSD--VVRSIKSL 441
GRTV S + +YE AQ II+ K G P L G+ D +V + L
Sbjct: 367 GRTVTYSDKRFAYEEAQVIIETK---------GNEIPADISLTGKAYKVDQAIVEATLKL 417
Query: 442 YEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTA 501
E++KI++ KR GA+ + + F DE P ++D N L EEFMLLAN+
Sbjct: 418 DELAKIMRAKRMQHGAISFDKVEVRFNLDENNNPEGVYFKTQKDANKLIEEFMLLANRKV 477
Query: 502 AEVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ--AREK 558
A I + P + R H P++ KL + S+ G L+ S SL Q A K
Sbjct: 478 AAYIGKQEPKKTFVYRIHDEPDIDKLANLQTIISRFGYSLNLKSRKSTTSSLNQLLADVK 537
Query: 559 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
K + + D L A R M A Y + GHY LAF Y+HFTSP+RRYPD++
Sbjct: 538 GKGEQNMVDTL---AIRSMSKAKYTTD-------NIGHYGLAFDYYSHFTSPIRRYPDVM 587
Query: 619 VHRTLNAALEAEK 631
VHR L L+ K
Sbjct: 588 VHRLLQHYLDGGK 600
>gi|228472159|ref|ZP_04056925.1| ribonuclease R [Capnocytophaga gingivalis ATCC 33624]
gi|228276362|gb|EEK15086.1| ribonuclease R [Capnocytophaga gingivalis ATCC 33624]
Length = 732
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 161/444 (36%), Positives = 234/444 (52%), Gaps = 28/444 (6%)
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
E+GD V RI +W + P + + G+ GE + +I+AIL E + F
Sbjct: 183 EDGDK------VLVRITQWTSRANSPYGVIEKILGKPGEHDTEIHAILAEYGLPHE-FPK 235
Query: 256 ESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHI 315
E + + +EE+ R+D+R FTIDP A D DDALS + L +G +GVHI
Sbjct: 236 EVEEYAQGLDTSIKEEEIAKRRDMREVLTFTIDPRDAKDFDDALSFQVLENGNFEIGVHI 295
Query: 316 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 375
ADVS++V P T LD EA R+TSVY++ R +PMLP +LS SL P ++ FS ++L
Sbjct: 296 ADVSHYVQPNTILDDEAYQRATSVYLVDRVVPMLPEVLSNFACSLRPEEEKYTFSAIFEL 355
Query: 376 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEG-WPQLY-----GQF 429
+ ++ + W+GRTVIRS + +YE AQ +I+ FD L + PQ G +
Sbjct: 356 SPKAEIRNTWLGRTVIRSDARFAYEEAQAVIEA-FDTPYMEVLTDFVMPQEISIRPEGSY 414
Query: 430 EWS-DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNF 488
S ++V +I SL +++IL++KR GA+ + + FL DE P ++ N
Sbjct: 415 TVSKEIVEAILSLNALAEILREKRMRAGAISFDKVEVKFLLDENNNPLGVYTKESKEANK 474
Query: 489 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 548
L EEFMLLAN+ AE A + + R H P+ KL + + S+ G +L+
Sbjct: 475 LIEEFMLLANRKVAEY-ASKLQKTFVYRIHDVPDEEKLLQMQGIISRFGYRLNLKDKKNI 533
Query: 549 HQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTH 606
S+ E++ K + L D L A R M A+Y + GHY LAF YTH
Sbjct: 534 SHSINHLLEEVHGKKEQNLVDTL---AIRSMSKAAYSTH-------NIGHYGLAFDDYTH 583
Query: 607 FTSPLRRYPDLVVHRTLNAALEAE 630
FTSP+RRYPD++VHR L L+ E
Sbjct: 584 FTSPIRRYPDVMVHRLLQRYLDKE 607
>gi|389642583|ref|XP_003718924.1| mitotic control protein dis3 [Magnaporthe oryzae 70-15]
gi|351641477|gb|EHA49340.1| mitotic control protein dis3 [Magnaporthe oryzae 70-15]
gi|440464780|gb|ELQ34148.1| mitotic control protein dis3 [Magnaporthe oryzae Y34]
gi|440489176|gb|ELQ68851.1| mitotic control protein dis3 [Magnaporthe oryzae P131]
Length = 990
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 189/562 (33%), Positives = 273/562 (48%), Gaps = 64/562 (11%)
Query: 81 STSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVN 140
S+ + TEK + Q++ ++R+ A + +PT +VV +I+R+ R+ VG ++
Sbjct: 354 SSGNITEKERKALQDE----VKRMQAK-GAEAQAQPTAKVVGVIKRNWRQ--YVGHID-- 404
Query: 141 QWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDA 200
+ K A + R +E + L P K PK+ + + + + + KR
Sbjct: 405 -----QSSVSKSATQGRK------QEVVFLIPMDKKIPKIRLRTRQVGELLGKR------ 447
Query: 201 TIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSC 260
+ ID W+ +S P H + G + A+L E + F L C
Sbjct: 448 ------ILVTIDAWDRDSRHPVGHFVRSLGELETKAAETEALLLEYDVQYRPFPKTVLDC 501
Query: 261 LPCV--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
LP W+VP R+DLR I +IDP D+DDAL L +G VGVH
Sbjct: 502 LPKEGHDWKVPASTDDPGWRDREDLRGLLICSIDPIGCQDIDDALHARPLPNGNFEVGVH 561
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVS+FV P A+D EA +R T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W+
Sbjct: 562 IADVSHFVKPSNAMDTEASIRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVERFAFSVLWE 621
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDV 434
L D+V+ ++VI+S SYE AQ +D D + L G
Sbjct: 622 LTPDADIVNARFTKSVIKSREAFSYEAAQIRVD---DASQQDELTTG------------- 665
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEF 493
I++L +SK LK KR GAL L + + V + E P D + L EEF
Sbjct: 666 ---IRTLLALSKKLKQKRMDAGALSLSSPEVKVQMESETSDPIDIKTKVHLETMSLVEEF 722
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSL 552
MLLAN + A I A P +A+LRRH AP E K G +L SS SL
Sbjct: 723 MLLANISVARKIYEASPQTAILRRHGAPPKTNFDELANQLKVKKGFELRVDSSRALADSL 782
Query: 553 EQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 611
+ + + F+ L+ ATR M A YFCSG + ++ HY LA +YTHFTSP+
Sbjct: 783 DTC---VDPNNPFFNTLVRIMATRCMMSAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPI 838
Query: 612 RRYPDLVVHRTLNAALEAEKLY 633
RRY DLV HR L AA+ E ++
Sbjct: 839 RRYADLVAHRQLAAAIGYEAVH 860
>gi|391337831|ref|XP_003743268.1| PREDICTED: exosome complex exonuclease RRP44-like [Metaseiulus
occidentalis]
Length = 978
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 247/505 (48%), Gaps = 41/505 (8%)
Query: 200 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 259
A + + + ID W S +P H + G G+ + + +L E+ I FS L+
Sbjct: 402 AALTGKRIVVAIDSWPRHSRYPLGHYVRTLGDIGDRKVENQVLLLEHDIPHQPFSQAVLN 461
Query: 260 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 319
CLP +PW + + R+D R+ ++DP TD+DDAL L +G +GVHIADVS
Sbjct: 462 CLPKMPWLITPLDESKRQDFRSVPTCSVDPPGCTDIDDALHARSLPNGNFEIGVHIADVS 521
Query: 320 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 379
+F+ P TALD EA R T+VY++ ++I M+P LLS + SL VDR AFS +++
Sbjct: 522 HFIRPHTALDREAATRGTTVYLVDQRIDMIPDLLSSNLCSLISDVDRFAFSAVFEMTEDA 581
Query: 380 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 439
VV +++IRS +Y AQ ID K +V ++
Sbjct: 582 KVVGAKYCKSIIRSKNSFTYAEAQARIDDK-------------------ARKDEVTEGLR 622
Query: 440 SLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLAN 498
L ++K +K KR +GAL L +S+ F D E P D ++N + EEFMLLAN
Sbjct: 623 VLNSLAKKMKLKRMENGALNLASSEVRFQVDSETHDPIDVKTKELLEVNSMVEEFMLLAN 682
Query: 499 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
K+ AE I ALLRRHP P + + G + SL++A
Sbjct: 683 KSVAEFIYNELSHCALLRRHPVPPVGNFDPLVRAAATRGFDIQVDCGKHLADSLDRA--S 740
Query: 559 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
+ D +L ATR M A YFCSG + D+ HY LA P YTHFTSP+RRY DL+
Sbjct: 741 IDTDPFFNTMLRMVATRCMSQAIYFCSGTIAKE-DFLHYGLALPFYTHFTSPIRRYSDLI 799
Query: 619 VHRTLNAALEAEKLY------WKHRRMLPKNNHREGV---RGR----FLTGIFY-DKDAA 664
VHR L A+ A+ Y + + + N+R + GR T I++ DK+
Sbjct: 800 VHRLLAVAIGADATYPELLDKVRVQNLCNNLNYRHKMAQYAGRASVTLYTQIYFRDKNVL 859
Query: 665 ES---LEGRE-ALSVAALKYGVPCA 685
E L RE AL V KYG+ C
Sbjct: 860 EDGYILFVRENALQVLLPKYGMECT 884
>gi|300774533|ref|ZP_07084396.1| ribonuclease R [Chryseobacterium gleum ATCC 35910]
gi|300506348|gb|EFK37483.1| ribonuclease R [Chryseobacterium gleum ATCC 35910]
Length = 717
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 232/450 (51%), Gaps = 41/450 (9%)
Query: 187 LPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYEN 246
+P + E+GD I ++ EW P+ ++ V G GE E +I++IL E
Sbjct: 180 IPKTKFNNAEDGDKVI------VKMTEWKPGDKNPEGEIIQVLGAPGEHETEIHSILAEY 233
Query: 247 AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 306
+ F E + + + EE+ R D+R C FTIDP A D DDALSI +L +
Sbjct: 234 GLPYE-FPQEVEADADKIDRSITDEEVAKRWDMRKICTFTIDPKDAKDFDDALSIRKLEN 292
Query: 307 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 366
G +GVHIADVS++V+PGT LD EA R+TSVY++ R +PMLP +LS +V SL P D+
Sbjct: 293 GNWEIGVHIADVSHYVVPGTILDDEAYQRATSVYLVDRVVPMLPEVLSNDVCSLRPNEDK 352
Query: 367 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY 426
FS ++LN ++ +W GRTVI S + +YE AQ+ I+ G+G
Sbjct: 353 YTFSAVFELNDQAEIQKQWFGRTVIHSDRRFTYEEAQERIE----------TGKG----- 397
Query: 427 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL 486
D+ I +L +++KI++++R GA+ + S+ F DE P +D
Sbjct: 398 ------DLAEEINTLDKLAKIMRNERIRKGAITFDRSEVRFNLDENNEPVGVYFKISKDS 451
Query: 487 NFLFEEFMLLANKTAAEVIA-----RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD 541
N L EEFMLLANK +E ++ ++ + R H P+ KL F + G +++
Sbjct: 452 NHLIEEFMLLANKKVSEFVSLTRKGEITNNTFIYRVHDDPDPAKLESLRDFVATFGYKMN 511
Query: 542 TSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAF 601
+++ + +SL + +K +++ A R M A Y GHY L F
Sbjct: 512 LANTKKVAESLNKLLHDVKGKGEE-NMIETLAMRSMSKAVYSTE-------PIGHYGLGF 563
Query: 602 PVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
Y+HFTSP+RRYPDL+ HR L L+ K
Sbjct: 564 EYYSHFTSPIRRYPDLLAHRLLQHYLDGGK 593
>gi|408491086|ref|YP_006867455.1| 3'-to-5' exoribonuclease R VacB [Psychroflexus torquis ATCC 700755]
gi|408468361|gb|AFU68705.1| 3'-to-5' exoribonuclease R VacB [Psychroflexus torquis ATCC 700755]
Length = 741
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 153/434 (35%), Positives = 223/434 (51%), Gaps = 28/434 (6%)
Query: 206 LVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP 265
LV RI +W ++ P+ + V G GE +++AIL + F PE +
Sbjct: 193 LVKVRIVQWKDKDDSPKGEITEVLGVPGEHNTEMHAILAGYGLP-EQFPPEVEEFANGID 251
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
++ E+ R+DLR+ FTIDP+ A D DDALS +++ +G +G+HIADV+++V PG
Sbjct: 252 TKIHSSEIKKRRDLRDTLTFTIDPADAKDFDDALSFKKMDNGNYEIGIHIADVAHYVQPG 311
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
T LD EA R+TS+Y++ R +PMLP +LS SL P ++ FS ++L GDV W
Sbjct: 312 TILDDEAYNRATSIYLVDRVVPMLPEILSNGACSLRPNEEKYTFSALFELTPRGDVKSEW 371
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGK-----FDVESSNTLGEGWPQLYGQFEWSDVVRSIKS 440
GRTV S + +YE AQ +ID K D+ S + P+L V +I +
Sbjct: 372 FGRTVTYSDARFAYEEAQFVIDSKDKHIPSDISLSKKAYDIQPEL---------VDAITT 422
Query: 441 LYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKT 500
+ ++SKI++ +R GA+ + + F DE P + +D N L EEFMLLAN+
Sbjct: 423 MNDLSKIMRKERMNQGAISFDKVEVKFHLDEDNNPKGVYVKTSQDANKLIEEFMLLANRK 482
Query: 501 AAEVIA-RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE-- 557
+E I R P + + R H P +L SK G LD + +L E
Sbjct: 483 VSEFIGKRKPPKTFVFRCHDEPQPDRLEALNTVVSKFGYSLDFKNKKNIANTLNGLLEDV 542
Query: 558 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
K K + L D L R M A Y + GHY LAF Y+HFTSP+RRYPD+
Sbjct: 543 KGKKEQNLVDTL---TIRTMSKAYYSTQ-------NIGHYGLAFDYYSHFTSPIRRYPDV 592
Query: 618 VVHRTLNAALEAEK 631
+ HR L ++ E+
Sbjct: 593 MAHRLLQRYIDKEQ 606
>gi|150026517|ref|YP_001297343.1| ribonuclease R [Flavobacterium psychrophilum JIP02/86]
gi|149773058|emb|CAL44542.1| Ribonuclease R [Flavobacterium psychrophilum JIP02/86]
Length = 724
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 264/522 (50%), Gaps = 59/522 (11%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
KRP G V+ ++ER+ + VG +++ + F + ++
Sbjct: 132 KRPEGEVIEVVERA--KTDFVGVIDIQKNFAF------------------------VSTA 165
Query: 174 HPK-YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+PK Y + + + + ++ ++GD +V I++W +++ P V V G+
Sbjct: 166 NPKMYTDIFIPLAKIAEA-----QQGD------VVLVHIEDWPKKADSPFGAVTKVLGKP 214
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE +I+AIL E + S F E + + + E+ R+D+R FTIDP A
Sbjct: 215 GEHNTEIHAILAEYGLP-SEFPVEVEIFAQKIDTSIQESEIAKRRDMRQTLTFTIDPKDA 273
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D DDALS ++L +G +G+HIADVS+++ GT LD EA R+TSVY++ R +PMLP +
Sbjct: 274 KDFDDALSFKKLENGNYEIGIHIADVSHYLQEGTILDDEAYQRATSVYLVDRVVPMLPEV 333
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS SL P ++ FS ++++ V+++W GRTVI S + +YE AQ II+ K
Sbjct: 334 LSNFACSLRPNEEKYTFSAIFEIDEKATVINQWFGRTVIDSNQRFAYEEAQYIIETK--- 390
Query: 413 ESSNTLGEGWPQLYGQFEWSD-VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDE 471
NT+ + SD +V + L E++KI++ KR DGA+ + + F +
Sbjct: 391 --DNTIPVDISITGSSYIVSDEIVAATLKLDELAKIMRRKRMNDGAISFDKVEVKFNLSQ 448
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
G P +D N L EEFMLLAN+ AE I + + + R H PN KL +A
Sbjct: 449 DGEPEGVFFKVSKDANHLIEEFMLLANRKVAEYIGKQ-KKTFIYRIHDEPNEDKLFAMQA 507
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLK--DDYVLFDILINYATRPMQLASYFCSGDFK 589
+K G ++D G+ +SL ++ + L D L A R M A Y
Sbjct: 508 VIAKFGYKIDF-RGGEISKSLNALMAEVNGTKEQNLIDTL---AIRTMSKAKYSTE---- 559
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
+ GHY LAF Y+HFTSP+RRYPD++VHR L L+ K
Sbjct: 560 ---NIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQFYLDGGK 598
>gi|390953990|ref|YP_006417748.1| RNAse R [Aequorivita sublithincola DSM 14238]
gi|390419976|gb|AFL80733.1| RNAse R [Aequorivita sublithincola DSM 14238]
Length = 735
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/428 (34%), Positives = 223/428 (52%), Gaps = 17/428 (3%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
E+V +++W E++ P V+ V G GE +I+AIL + + F PE + +
Sbjct: 187 EIVLVAMEDWPEKADSPFGSVIKVLGMPGEHNTEIHAILAQYGLPYE-FPPEVEAYANKI 245
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
+ E+ R+D+R FTIDP A D DDALS E+L +G +G+HIADVS++V P
Sbjct: 246 DTSIKASEIKKRRDMRKSLTFTIDPKDAKDFDDALSFEKLDNGNYEIGIHIADVSHYVTP 305
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
G LD EA R+TSVY++ R +PMLP +LS SL P ++ FS +++N +VV +
Sbjct: 306 GNELDDEAYERATSVYLVDRVVPMLPEILSNNACSLRPNEEKYTFSAVFEMNQKAEVVKQ 365
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS-DVVRSIKSLYE 443
W G+TV S + +YE AQ +I+ E ++ + Q+ ++ +I +
Sbjct: 366 WFGKTVTYSDARFAYEEAQHVIENP--KEETHIIPSNISITDKQYTVKPEIAEAILEMDR 423
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
++K L+ KR GA+ + + F+ DE P +D N + EEFMLLAN++ AE
Sbjct: 424 LAKTLRTKRMRAGAISFDKVEVKFILDEQSNPEGVYFKESKDANKMIEEFMLLANRSVAE 483
Query: 504 VIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--K 560
I + P + R H P+ K+ E + G +L+T S+ + + + K
Sbjct: 484 FIGKQQPKKTFVYRVHDEPDDEKIAALENIIKRFGYKLNTKDRHTTATSMNKLLKDVQGK 543
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
+ L D L R M A Y + GHY LAF YTHFTSP+RRYPD++VH
Sbjct: 544 KEQNLIDTL---TIRSMSKAMYTTH-------NIGHYGLAFDYYTHFTSPIRRYPDVMVH 593
Query: 621 RTLNAALE 628
R L LE
Sbjct: 594 RLLQHYLE 601
>gi|432092218|gb|ELK24842.1| DIS3-like exonuclease 1 [Myotis davidii]
Length = 900
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 172/543 (31%), Positives = 275/543 (50%), Gaps = 57/543 (10%)
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCV----PWEVPQEELLSRKDLR-NFCI 284
GR G++E +I IL EN I + FS + +P PW+V EE R+DLR +
Sbjct: 252 GRIGDLEGEIATILVENNISVAPFSEAQMCKMPVNTPENPWKVSPEEERERRDLRKTHLV 311
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
F+IDP D+DD LS+ L++G +GVHIADV++FV P + +DIEA+ R+T+ Y+ R
Sbjct: 312 FSIDPKGCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEAKTRATTYYLADR 371
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDRWIGRTVIRSCCKLSYEHAQ 403
+ MLP +LS ++ SL GVDR A SI W+L+ ++ W GRT+IRS KL YE AQ
Sbjct: 372 RYDMLPSILSADLCSLLGGVDRYAVSIMWELDKTSYEIKKVWYGRTIIRSSYKLFYEAAQ 431
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+++DG F++ + Q + ++V +I L ++++ ++ KR GAL LE
Sbjct: 432 ELLDGNFNIIDDIPEFRDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDLCGALELEGV 491
Query: 464 KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
+ DE D + +++ E M+LAN A+ I +FP ALLR+HP P+
Sbjct: 492 EVRVQLDEKKNIRDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQ 551
Query: 524 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 583
E G +DT S+ SL+ A + +D ++ +L + AT+ M A YF
Sbjct: 552 EFFSELRECAKAKGFFIDTRSNKTLADSLDNAND--PNDPIVNRLLRSMATQAMSNALYF 609
Query: 584 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKN 643
+G ++ ++ HY LA YTHFTSP+RRY D++VHR L AA+ +K +M K
Sbjct: 610 STGSCAEE-EFHHYGLALDKYTHFTSPIRRYADIIVHRLLMAAISKDK------KMEVKE 662
Query: 644 NHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACR 703
N +F +KD E + H N+R A +
Sbjct: 663 N------------LFSNKDLEE-------------------------LCRHINNRNRAAQ 685
Query: 704 NVKDACVKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEG 758
+ + +L+ + K K E +++ + ++ + ++I + I+ Y +G
Sbjct: 686 HSQKQSTELFQCMYFKDKDQETEERCIADGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDG 745
Query: 759 LIV 761
L++
Sbjct: 746 LVI 748
>gi|225010325|ref|ZP_03700797.1| ribonuclease R [Flavobacteria bacterium MS024-3C]
gi|225005804|gb|EEG43754.1| ribonuclease R [Flavobacteria bacterium MS024-3C]
Length = 736
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 157/433 (36%), Positives = 225/433 (51%), Gaps = 32/433 (7%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAIL------YENAICCSGFSPESLSC 260
V + +W + S P+ + V G GE + +I+AIL YE S F+ +
Sbjct: 192 VVVELTKWEQNSSSPEGKITQVLGVPGEHQTEIHAILAAYGLPYEFPFEVSEFANQ---- 247
Query: 261 LPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 320
+ + E+ R+D+R+ FTIDP A D DDALS ++L +G +G+HIADVS+
Sbjct: 248 ---IDTSIQASEIAKRRDMRDVLTFTIDPKDAKDFDDALSFQKLDNGHFEIGIHIADVSH 304
Query: 321 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGD 380
++ T LD EA R+TSVY++ R +PMLP +LS E SL P ++ FS +++N
Sbjct: 305 YLQEDTVLDDEAFQRATSVYLVDRVVPMLPEVLSNEACSLRPHEEKYTFSAIFEINHQAQ 364
Query: 381 VVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVR-SIK 439
+V W GRTVI S + +YE AQ II+ + SN + ++ S+ ++ ++
Sbjct: 365 IVSEWFGRTVINSNERFAYEEAQHIIETE-----SNEIPANISIRETAYKVSNEIKEAVL 419
Query: 440 SLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANK 499
+L ++KIL+ KR GA+ + + F DE P +D N L EEFMLLANK
Sbjct: 420 TLDNLAKILRTKRMKQGAISFDKVEVRFALDEDFNPTTVFFKESKDANKLIEEFMLLANK 479
Query: 500 TAAEVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE- 557
A I + P+ + R H P+ KL + S+ G QLD S +QSL +
Sbjct: 480 QVAAFIGKQKPEKPFVYRVHDEPDEDKLIALQGVVSRFGHQLDFKSKVTMNQSLNTLLQN 539
Query: 558 -KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 616
K K + L D L A R M A Y + GHY LAF YTHFTSP+RRYPD
Sbjct: 540 VKGKKEQNLVDTL---AIRSMSKAIYTTD-------NIGHYGLAFEHYTHFTSPIRRYPD 589
Query: 617 LVVHRTLNAALEA 629
++VHR L LE
Sbjct: 590 VMVHRLLQYYLEG 602
>gi|259149463|emb|CAY86267.1| Dis3p [Saccharomyces cerevisiae EC1118]
Length = 1001
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 193/572 (33%), Positives = 280/572 (48%), Gaps = 79/572 (13%)
Query: 106 AMISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD 164
AMI+ K +PT +VV I RS W Y G + +SS +
Sbjct: 377 AMIAQRSKKIQPTAKVVYIQRRS--------------WRQYVGQLAPSSVDPQSSST--- 419
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
+ + + H PK+ + + + + KR + ID W +P H
Sbjct: 420 -QNVFVILMHKCLPKVRIRTRRAAELLDKR------------IVISIDSWPTTHKYPLGH 466
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV------------PWEVPQEE 272
+ G + + A+L E+ + FS + L CLP P V ++
Sbjct: 467 FVRDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDP 526
Query: 273 LLS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 331
LL+ RKDLR+ I +IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E
Sbjct: 527 LLTKRKDLRDKLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAE 586
Query: 332 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVI 391
R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VI
Sbjct: 587 GAARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVI 646
Query: 392 RSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDK 451
RS SYE AQ ID K ++ L G +++L ++S LK K
Sbjct: 647 RSREAFSYEQAQLRIDDK---TQNDELTMG----------------MRALLKLSVKLKQK 687
Query: 452 RFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFP 510
R GAL L + + V + E P + + N L EEFMLLAN + A I AFP
Sbjct: 688 RLEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFP 747
Query: 511 DSALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 567
+A+LRRH AP N L E ++ + + SS SL++ + +D Y F+
Sbjct: 748 QTAMLRRHAAPPSTNFEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FN 802
Query: 568 ILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 626
L+ +TR M A YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A
Sbjct: 803 TLVRIMSTRCMMAAQYFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGA 861
Query: 627 LEAEKLYWKHR-----RMLPKNNHREGVRGRF 653
+ E L HR M+ +N +R+ +F
Sbjct: 862 IGYEPLSLTHRDKNKMDMICRNINRKHRNAQF 893
>gi|346225792|ref|ZP_08846934.1| ribonuclease R [Anaerophaga thermohalophila DSM 12881]
gi|346226965|ref|ZP_08848107.1| ribonuclease R [Anaerophaga thermohalophila DSM 12881]
Length = 720
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 178/564 (31%), Positives = 267/564 (47%), Gaps = 83/564 (14%)
Query: 80 PSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNV 139
P D V+ S +N + P K+ G VV IIERS RD VG L V
Sbjct: 100 PDEGDEDIFVAQSNLGHALNGDRVKVLQYARKPRKQAEGEVVEIIERS--RDHFVGTLEV 157
Query: 140 NQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGD 199
++ F + D++ + +P P H K G
Sbjct: 158 SKGFAFLVA---DSRVMHHDIFIP--------PEHLK---------------------GG 185
Query: 200 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 259
+ +V I EW + P V+ + G GE +++AIL E + + ++
Sbjct: 186 KNGQKAVVC--ITEWPGRAKNPIGKVVDILGNPGENNTEMHAILAEFNLPYK-YPANVVA 242
Query: 260 CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVS 319
+ ++P E+ R+D R FTIDP+ A D DDALS+ +L +G VG+HIADV+
Sbjct: 243 AAEKIKDKIPAAEIKKRRDFRKVTTFTIDPADAKDFDDALSLRKLKNGNWEVGIHIADVT 302
Query: 320 YFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG 379
++V P T +D EA R+TSVY++ R +PMLP LS E+ SL P D+L FS ++L++
Sbjct: 303 HYVHPNTVIDKEAADRATSVYLVDRVVPMLPERLSNELCSLRPDEDKLCFSAVFELDNDA 362
Query: 380 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 439
V+D W+GRT+IRS + +YE AQ +I+ GEG D+ +K
Sbjct: 363 RVLDSWVGRTIIRSDRRFTYEEAQTVIE----------TGEG-----------DLNSELK 401
Query: 440 SLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANK 499
L ++++ L+ +RF+ G++ E + F DE G P ++ N L EEFMLLAN+
Sbjct: 402 VLNDLAQKLRKERFSKGSIDFERVEVKFELDENGNPLSVFFKEAKEANKLIEEFMLLANR 461
Query: 500 TAAEVIARAFPD-----------SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 548
AE+I + D + + R H PN K F F K G + + +
Sbjct: 462 RVAEIIGQNELDGKNSAPGKNAKTFVYRIHDEPNPEKYETFSKFVRKLGFE----AMPKG 517
Query: 549 HQSLEQAREKLKDDYV---LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYT 605
H+++ + +L D+ +I+ A R M A Y + GHY L F YT
Sbjct: 518 HETIGHSLNRLLDEVQGKKHQNIVETLAIRTMSKAVYSTH-------NIGHYGLGFKYYT 570
Query: 606 HFTSPLRRYPDLVVHRTLNAALEA 629
HFTSP+RRYPD++VHR L L+
Sbjct: 571 HFTSPIRRYPDMMVHRLLQRYLDG 594
>gi|426192156|gb|EKV42094.1| hypothetical protein AGABI2DRAFT_212705 [Agaricus bisporus var.
bisporus H97]
Length = 995
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 183/535 (34%), Positives = 261/535 (48%), Gaps = 69/535 (12%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVPDREYIQLT 171
++PTGRVV II+R+ W Y S N +SL+ ++ + T
Sbjct: 374 RQPTGRVVGIIKRN--------------WRAYVCHIDSTSLTSLNATSLA---QQTVFAT 416
Query: 172 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
P P++ + + P I ++ + ID W+ S +P+ H + G+
Sbjct: 417 PVSRLLPRIRLRTRQAPTLIGQK------------ILVTIDRWDINSRYPEGHFVRSLGK 464
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE-----ELLSRKDLRNFCI 284
E + +++ E + F L CLP W VP + E +R+DLR I
Sbjct: 465 VESKEAEQESLMLEFDVRYRPFGKAILDCLPPQGEQWVVPPKDDVNPEWKNREDLRQLLI 524
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL L +G GVHIADVS+FV T +D EA R T+VY++ R
Sbjct: 525 CSIDPPGCQDIDDALHARPLPNGNIEAGVHIADVSHFVHADTPIDNEAADRGTTVYLVDR 584
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP LL + SL P V+RLAFS W+L ++V+ ++VI S +YE AQ
Sbjct: 585 RIDMLPSLLGTNLCSLRPFVERLAFSAIWELTPEAEIVNVRFTKSVIASKAAFTYEEAQ- 643
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
+ + P + D+ SI+ L ++K LK+KR GAL L + +
Sbjct: 644 -------------IRKDDPN-----QQDDLSHSIRLLNTLAKKLKEKRMKAGALNLASPE 685
Query: 465 PVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---P 519
D E P D + N L EEFMLLAN + AE I FP +A+LRRH P
Sbjct: 686 VKIYLDSSESSDPIDVEQKELRETNSLVEEFMLLANISVAEKIQETFPQTAVLRRHLPPP 745
Query: 520 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 578
N KL++ + G++LD SSS SL+ + + F+ L+ ATR M
Sbjct: 746 KANFEKLQDI--LMKRRGIKLDVSSSRALADSLDTCVDPQEPS---FNTLVRIMATRCML 800
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
A YFCSG DT +GHY LA +YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 801 SAEYFCSGSVARDT-FGHYGLASAIYTHFTSPIRRYADVLAHRQLAAAIGNSPLH 854
>gi|88801781|ref|ZP_01117309.1| ribonuclease R [Polaribacter irgensii 23-P]
gi|88782439|gb|EAR13616.1| ribonuclease R [Polaribacter irgensii 23-P]
Length = 740
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 231/432 (53%), Gaps = 20/432 (4%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V A+I +W + S P ++ V G+ GE ++++IL E + F E +
Sbjct: 192 VQAKIIDWPQNSKNPFGKIITVLGKPGEHNTEMHSILLEYDLPYE-FESEVEKEAENLSI 250
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
E+ +EE+ R+D+R FTIDP A D DDALS ++L +G +G+HIADVS+++ P T
Sbjct: 251 EITKEEISKRRDMRKDLTFTIDPKDAKDFDDALSFKKLENGNFEIGIHIADVSHYLEPKT 310
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R +PMLP +LS V SL P ++L FS +++N ++ +W
Sbjct: 311 ILDDEAYKRATSVYLVDRVVPMLPEMLSNGVCSLRPNEEKLTFSAVFEINQKAQIISQWF 370
Query: 387 GRTVIRSCCKLSYEHAQDIIDG-KF-DVESSNTLGEGWPQLYGQFEWS-DVVRSIKSLYE 443
GRTV S + +YE AQ II+ K D S T+ + +++ + ++V + L E
Sbjct: 371 GRTVTYSDQRFAYEEAQSIIENCKLSDSISPYTMPADTSIIDKEYQVTPEIVAATLKLNE 430
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+SKIL+ KR DGA+ + + F D+ P +D N L EEFMLLAN+ AE
Sbjct: 431 LSKILRKKRMKDGAISFDRVEVKFDLDKEANPVGVFFKESKDANKLIEEFMLLANRKVAE 490
Query: 504 VI----ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 559
I +A + + R H P++ KL + SK G +++T + SL Q +
Sbjct: 491 FIGFSKGKATNKTFIYRVHDEPDVEKLASLQNMVSKFGYKINTDTKEATSDSLNQLLSDV 550
Query: 560 --KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
K + + + L R M A Y + GHY L+F Y+HFTSP+RRYPD+
Sbjct: 551 HGKPESNMIETL---TIRTMSKAVYTTQ-------NIGHYGLSFDYYSHFTSPIRRYPDI 600
Query: 618 VVHRTLNAALEA 629
+ HR L LE
Sbjct: 601 MTHRLLQHYLEG 612
>gi|402077965|gb|EJT73314.1| mitotic control protein dis3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 991
Score = 253 bits (645), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 189/553 (34%), Positives = 266/553 (48%), Gaps = 60/553 (10%)
Query: 89 VSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG 148
VS ++ ++R+ A + +PT +VV +I+R+ W Y G
Sbjct: 359 VSEKERKALQEEVKRMQAK-GAEAQAQPTAKVVGVIKRN--------------WRQYVGH 403
Query: 149 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVA 208
+ + ++S+ +E + L P K PK+ + + + + + KR+ LV
Sbjct: 404 IDQTSV-SQSATQGRKQETVFLIPMDKKVPKIRLRTRQVGELLGKRI----------LVT 452
Query: 209 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PW 266
ID W+ +S P H + G + A+L E + F L CLP W
Sbjct: 453 --IDAWDRDSRHPVGHFVRSLGELETKAAETEALLLEYDVQYRPFPKTVLDCLPKEGHDW 510
Query: 267 EVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP R+DLR I +IDP D+DDAL L +G VGVHIADVS+FV
Sbjct: 511 RVPASTEDPGWRDREDLRPLLICSIDPIGCQDIDDALHARTLPNGNFEVGVHIADVSHFV 570
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
P A+D EA +R T+VY++ ++I MLP+LL ++ SL P V+R AFS+ W++ + +VV
Sbjct: 571 KPNNAMDTEASIRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVERYAFSVLWEMTAEAEVV 630
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
++VI+S SYE AQ ID D ++ L EG I++L
Sbjct: 631 GVRFTKSVIKSREAFSYEQAQIRID---DASQTDELTEG----------------IRTLL 671
Query: 443 EVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTA 501
+SK LK KR GAL L + + V + E P D D L EEFMLLAN +
Sbjct: 672 RLSKKLKQKRMDAGALSLSSPEVKVQMESETSDPIDIKTKVHLDTMSLVEEFMLLANISV 731
Query: 502 AEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 560
A I A P +A+LRRH AP E K G +L SS SL+ E
Sbjct: 732 AGKIYEASPQTAILRRHGAPPKTNFDELANQLRVKKGFELRADSSRALADSLDACVEPAD 791
Query: 561 DDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
F+ L+ ATR M A YFCSG + ++ HY LA +YTHFTSP+RRY DLV
Sbjct: 792 P---FFNTLVRIMATRCMMSAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADLVA 847
Query: 620 HRTLNAALEAEKL 632
HR L AA+ E +
Sbjct: 848 HRQLAAAIGYEAV 860
>gi|374599198|ref|ZP_09672200.1| RNAse R [Myroides odoratus DSM 2801]
gi|423324342|ref|ZP_17302183.1| ribonuclease R [Myroides odoratimimus CIP 103059]
gi|373910668|gb|EHQ42517.1| RNAse R [Myroides odoratus DSM 2801]
gi|404608434|gb|EKB07898.1| ribonuclease R [Myroides odoratimimus CIP 103059]
Length = 725
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 181/566 (31%), Positives = 278/566 (49%), Gaps = 69/566 (12%)
Query: 73 NYINGHHPSTSDSTEK-VSSSQQNDGMNAIERLSA-----MISSY-----PTKRPTGRVV 121
NY+ GH TS T VS + D L+ ++ +Y ++P G VV
Sbjct: 79 NYVEGHIDMTSKKTAYLVSEELEEDVFIPTNNLNKALDGDLVKAYIYNKRKGRKPEGEVV 138
Query: 122 SIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMV 181
++ER R VG +++ + N+ + DAK + + +P +++ P
Sbjct: 139 EVLER--HRTQFVGVIDIQK--NFAFVTTADAKM-YTDIFIPKDKFLGAQP--------- 184
Query: 182 VLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINA 241
GD +V +++W E++ P V+ V G+ GE +I+A
Sbjct: 185 ----------------GD------VVLVDLEDWPEKADSPFGKVVKVLGKQGEHNTEIHA 222
Query: 242 ILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSI 301
IL E + + F E + + +EE+ R+D+R FTIDP A D DDALS
Sbjct: 223 ILAEYGLP-NEFPKEVEEFANKLDTSIQEEEVAKRRDMREVLTFTIDPKDAKDFDDALSF 281
Query: 302 ERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLN 361
+ L +G +G+HIADVS++V GT LD EA R+TSVY++ R +PMLP +LS SL
Sbjct: 282 QTLENGNYEIGIHIADVSHYVREGTILDDEAFHRATSVYLVDRTVPMLPEVLSNFACSLR 341
Query: 362 PGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV--ESSNTLG 419
P D+ FS +++N+ G++V+ W GRTV S +++YE AQ II+ + ES + G
Sbjct: 342 PHEDKYTFSAVFEMNAKGELVNSWFGRTVTHSDQRMAYEEAQYIIETQDRTVPESISITG 401
Query: 420 EGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSV 479
E Q +V ++ +L +++ IL+ KR GA+ + + F + P
Sbjct: 402 E------VQEISEEVAHAVLTLNKLAHILRQKRMKAGAISFDKVEVKFNLNSESEPVGVF 455
Query: 480 LSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ 539
+D N L EEFMLLAN+ +E I + + + R H P+ KL +A S+ G
Sbjct: 456 FKEAKDANHLIEEFMLLANRKVSEFIGKQ-KKTFVYRIHDEPDQDKLFGLQAIISRFGHS 514
Query: 540 LDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHY 597
L+ S +SL + + + K + L D L A R M ASY + GHY
Sbjct: 515 LNFKSRDTISKSLNELLKNVQGKKEQNLVDTL---AIRSMSKASYSTQ-------NIGHY 564
Query: 598 ALAFPVYTHFTSPLRRYPDLVVHRTL 623
LAF Y+HFTSP+RRYPD++ HR L
Sbjct: 565 GLAFDYYSHFTSPIRRYPDVMAHRLL 590
>gi|302675629|ref|XP_003027498.1| hypothetical protein SCHCODRAFT_83349 [Schizophyllum commune H4-8]
gi|300101185|gb|EFI92595.1| hypothetical protein SCHCODRAFT_83349 [Schizophyllum commune H4-8]
Length = 988
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 181/529 (34%), Positives = 258/529 (48%), Gaps = 65/529 (12%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
K+PTGRVV II+R+ W +Y + + N ++ S + + PT
Sbjct: 371 KQPTGRVVGIIKRN--------------WRSYVCHIDRASLSNAAATSHA-LQSVFAQPT 415
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ P++ + + P I ++ + ID W+ S +P+ H + G G
Sbjct: 416 ARQLPRIRMRTRQAPRLIGQK------------ILVTIDRWDATSRYPEGHFVRALGAVG 463
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVP---------QEELLSRKDLRNF 282
E + ++L E + F LSCLP W VP + R+DLR
Sbjct: 464 GKETEQESLLLEFDVPYRPFGAAVLSCLPPEGDSWVVPPRPDDTAVDKGAWRDREDLRGE 523
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
I +IDP D+DDAL ++L +G GVHIADVS+FVLP A+D EA R T+VY++
Sbjct: 524 IICSIDPPGCQDIDDALHAKQLPNGNIEAGVHIADVSHFVLPDNAMDHEAASRGTTVYLV 583
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
++I MLP LL + SL P V+RLAFS W+L ++V+ ++VI S +YE A
Sbjct: 584 DKRIDMLPSLLGTNLCSLRPFVERLAFSAIWELTPEAEIVNVRFTKSVIASKAAFTYEEA 643
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
Q D DV + L SI+ L ++ LK KR GAL L +
Sbjct: 644 QIRKD---DVHQQDAL----------------TNSIRLLNSLAIRLKAKRMAAGALNLAS 684
Query: 463 SKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
+ D E P D + N L EEFMLLAN + A I F +A+LRRH
Sbjct: 685 PEVKIHLDSAESSDPIDVEQKELRETNSLVEEFMLLANISVARKIQETFVQTAVLRRHLP 744
Query: 521 PNMRKLREFEAFCSKH-GLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 578
P + + K GL+LD SSSG SL++ + + F+ L+ ATR M
Sbjct: 745 PPRDNFKNLQDILKKRKGLELDVSSSGALAASLDKC---IDPNEPAFNTLVRIMATRCML 801
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
A YF +G +T +GHY LA +YTHFTSP+RRY D++VHR L+AA+
Sbjct: 802 SAEYFAAGSVARET-YGHYGLASEIYTHFTSPIRRYADVLVHRQLSAAI 849
>gi|358395895|gb|EHK45282.1| hypothetical protein TRIATDRAFT_128033 [Trichoderma atroviride IMI
206040]
Length = 986
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 188/556 (33%), Positives = 269/556 (48%), Gaps = 72/556 (12%)
Query: 87 EKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYK 146
E+V +Q+ G N ++ PT +VV +++R+ W Y
Sbjct: 362 EEVKRTQKASGENQLQ-------------PTAKVVGVVKRN--------------WRQYV 394
Query: 147 GGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMEL 206
G + N+ S + + L P K PK+ + + + + + KRL L
Sbjct: 395 GHI-DPSTANKGSSQGRKLDSVFLIPMDKKIPKIRLRTRQVSELLGKRL----------L 443
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV-- 264
V +D W+ +S P H++ G + A+L E + F L CLP
Sbjct: 444 VT--VDSWDRDSRHPVGHLVRSLGELETKAAETEALLLEWDVQYRPFPKTVLDCLPKEGH 501
Query: 265 PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 320
W+VP + R+DLR I +IDP D+DDAL L +G VGVHIADVS
Sbjct: 502 DWKVPASKEDPGWRDREDLRELLICSIDPPGCQDIDDALHARLLPNGNYEVGVHIADVSN 561
Query: 321 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGD 380
FV P A+D EA +R T+VY++ ++I MLP+LL ++ SL P V+R AF++ W+LN D
Sbjct: 562 FVKPANAMDTEASIRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVERFAFTVIWELNDNAD 621
Query: 381 VVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKS 440
+V+ ++VI S SYE AQ ID + + D+ + ++
Sbjct: 622 IVNVRFTKSVIASREAFSYEQAQLRID-------------------DESQQDDLTKGMRM 662
Query: 441 LYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANK 499
L +SK LK KR GAL L + + V + E P D D N L EEFML AN
Sbjct: 663 LLMLSKKLKKKRMDAGALSLSSPEIKVHMESESSDPIDVKTKELLDTNSLVEEFMLFANV 722
Query: 500 TAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
+ A I AFP +A+LRRH AP E + K GL+L T SS SL++
Sbjct: 723 SVAAKIYEAFPQTAILRRHAAPPKTNFDELADQLRIKRGLELRTDSSKALADSLDKC--- 779
Query: 559 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
+ D F+ L+ ATR M A YFCSG + ++ HY LA +YTHFTSP+RRY DL
Sbjct: 780 VDDKDPFFNTLVRIMATRCMMSAEYFCSGT-QSYPEFRHYGLASEIYTHFTSPIRRYADL 838
Query: 618 VVHRTLNAALEAEKLY 633
+ HR L AA+ E ++
Sbjct: 839 LAHRQLAAAIGYEAVH 854
>gi|448112215|ref|XP_004202038.1| Piso0_001511 [Millerozyma farinosa CBS 7064]
gi|359465027|emb|CCE88732.1| Piso0_001511 [Millerozyma farinosa CBS 7064]
Length = 987
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 168/449 (37%), Positives = 236/449 (52%), Gaps = 39/449 (8%)
Query: 205 ELVAARI----DEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSC 260
EL+ RI D W S +PQ H + G E + A+L E+ + FS LSC
Sbjct: 435 ELLGKRIVVVVDSWPSNSKYPQGHFVRCLGDVESAEAETEALLLEHDVEYRPFSKSVLSC 494
Query: 261 LP--CVPWEV-----PQE-ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
LP W V P++ + R DLR+ + +IDP D+DDAL +L +G VG
Sbjct: 495 LPEDGDNWTVENHSNPEDPKFAKRVDLRDRLVCSIDPPNCVDIDDALHARKLPNGNYEVG 554
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADV++FV TALD EA R TSVY+++++I MLP++L + SL P VDR AFS+
Sbjct: 555 VHIADVTHFVRANTALDAEAASRGTSVYLVEKRIDMLPMVLGTNLCSLKPYVDRFAFSVI 614
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W+++ ++V +++I+S +YE AQ ID K S N
Sbjct: 615 WEVDEDANIVKADFMKSIIKSRKAFAYEEAQIRIDDK----SQN---------------D 655
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFE 491
++ +S++ L +SK LK KR GAL L + + V + +E P + + + N L E
Sbjct: 656 ELTQSMRILLNLSKKLKSKRVKAGALNLASPEVKVHMDNETSDPGEVEIKQLLETNSLVE 715
Query: 492 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF--CSKHGLQLDTSSSGQFH 549
EFML AN + A I A+P +A+LRRH AP E K + L SS
Sbjct: 716 EFMLFANISVARKIFDAYPQTAMLRRHAAPPATNFEELNNMLRARKKNMALSLESSKALA 775
Query: 550 QSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 608
SL++ ++ KD Y F+ L+ +TR M A YF SG + W HY LA +YTHFT
Sbjct: 776 DSLDRCVDE-KDPY--FNTLLRIMSTRCMMAAEYFPSGSYGYPEFW-HYGLAVDIYTHFT 831
Query: 609 SPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
SP+RRY D+VVHR L A+ E+L HR
Sbjct: 832 SPIRRYCDVVVHRQLAGAIGYEQLDLSHR 860
>gi|365877396|ref|ZP_09416900.1| rnase r [Elizabethkingia anophelis Ag1]
gi|442587671|ref|ZP_21006486.1| ribonuclease R [Elizabethkingia anophelis R26]
gi|365754829|gb|EHM96764.1| rnase r [Elizabethkingia anophelis Ag1]
gi|442562525|gb|ELR79745.1| ribonuclease R [Elizabethkingia anophelis R26]
Length = 717
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 153/425 (36%), Positives = 225/425 (52%), Gaps = 39/425 (9%)
Query: 214 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEEL 273
W+++S P+ ++ V G GE E +I+AIL E + + F PE + + + ++E+
Sbjct: 201 WDDKSKNPEGEIVDVLGHPGEHETEIHAILAEYGLPYN-FPPEVEAEAQKIDKTLSEQEI 259
Query: 274 LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 333
R D+R+ FTIDP A D DDALS+ +L +G VGVHIADVSY+V PGT LD EA
Sbjct: 260 AKRWDMRDILTFTIDPKDAKDFDDALSLRKLENGNIEVGVHIADVSYYVQPGTLLDQEAY 319
Query: 334 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 393
R+TS+Y++ R +PMLP +LS E+ SL P D+ FS ++LN ++ +W GRTVI S
Sbjct: 320 DRATSIYLVDRVVPMLPEVLSNELCSLRPNEDKFTFSAVFELNDKAEIQKQWFGRTVINS 379
Query: 394 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 453
+ SYE AQ+ I+ K EG D+ I L ++KIL+ R
Sbjct: 380 DRRFSYEEAQERIETK----------EG-----------DLAEEINLLDSLAKILRKDRM 418
Query: 454 TDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA-----RA 508
GA+ + ++ F +E P +D N L EEFMLLANK +E ++
Sbjct: 419 KHGAIAFDRAEVRFNLNEESQPIGVYFKISKDANHLIEEFMLLANKKVSEFVSLTRKNEP 478
Query: 509 FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ--AREKLKDDYVLF 566
++ + R H P+ KL F G +++ S+ + +S+ + A K K + +
Sbjct: 479 TNNTFIYRIHDDPDPTKLASLRDFVHTFGYKMNISNRNKISESMNKLLAEVKGKGEENMI 538
Query: 567 DILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 626
+ L A R M A Y + GHY LAF Y+HFTSP+RRYPD++ HR L
Sbjct: 539 ETL---AMRSMSKAVYSTE-------NIGHYGLAFEYYSHFTSPIRRYPDVMAHRLLQHY 588
Query: 627 LEAEK 631
L+ K
Sbjct: 589 LDGGK 593
>gi|256072320|ref|XP_002572484.1| ribonuclease II-related [Schistosoma mansoni]
Length = 1333
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 182/565 (32%), Positives = 264/565 (46%), Gaps = 91/565 (16%)
Query: 208 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP-- 265
RI +W E S +P + FG E+E IL E I F+PE L LP P
Sbjct: 747 VCRITKWFENSKYPHGVIEQNFGNLNELEKATENILLEYGITDDQFTPEELQGLPTSPQE 806
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
+++P+ E R+D R+ C+ TIDP A D DDAL I RL++G+ +VG+HIADVSYFV P
Sbjct: 807 FQIPKIEYERRRDFRSHCVITIDPKDAKDFDDALHITRLNNGLYQVGIHIADVSYFVYPN 866
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
+ LD A R+TSVY++Q+ IPMLP +LS+ + SL P DRLAFSI + G++VD W
Sbjct: 867 SPLDKRAADRTTSVYLVQKVIPMLPPILSQHLCSLVPNEDRLAFSILLTVKENGEIVDEW 926
Query: 386 IGRTVIRSCCKLSYEHAQDII---DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
GR++IRS C+L+Y+ A II +E + L E P+ F + D+ + SL+
Sbjct: 927 FGRSIIRSRCRLTYDEAWSIIQMTQSNPAIEDKSCLLEFLPKPEAPFTFEDLQHCLSSLH 986
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLF-----------DEYGT---PYDSVLSGREDLNF 488
+++ L+ R +GA+ LE + F F +E T P + R +
Sbjct: 987 LIAQNLRSHRIENGAVSLEKLELNFNFPKPLSVMEKCTNECSTTRWPQGFSVKVRNPAHH 1046
Query: 489 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 548
L EE+M++AN++ A + F A LR HP P + + + F L D
Sbjct: 1047 LIEEWMIVANQSVARFLFGNFIKRATLRNHPKPEKKNISYDDHFL--RMLSFDP------ 1098
Query: 549 HQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 608
QS+ Q ++NY W HY L+ P+YTHFT
Sbjct: 1099 -QSILQQNNI---------TMLNYT--------------------W-HYGLSIPLYTHFT 1127
Query: 609 SPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLE 668
SP+RRY DL+VHR + L + + ++ ++N KD +S
Sbjct: 1128 SPIRRYADLMVHRQIARILGCDNYVYPELQISFQSNDDS-----------IQKDIKDS-- 1174
Query: 669 GREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEA 728
DI + VA CNDR+L R +A L++ L+
Sbjct: 1175 -----------------DIDLLVA-WCNDRRLKARRAGEASQHLFLTACLRDYGPFYENG 1216
Query: 729 RVLALGPRFMTIYIEK--LAIERRI 751
V+ L + I I L IE I
Sbjct: 1217 TVMDLSANKIRILIASFGLTIETEI 1241
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 139/338 (41%), Positives = 200/338 (59%), Gaps = 13/338 (3%)
Query: 311 VGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFS 370
VGVHIADVSYFV P + +D EA R+TS+Y++Q +PMLP LL EE SLNPG D+LAFS
Sbjct: 15 VGVHIADVSYFVKPNSLVDKEAASRATSIYLVQLCVPMLPRLLCEEQCSLNPGEDKLAFS 74
Query: 371 IFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFE 430
+ + + ++ W GRT IRSCCKLSYE AQ ID D + S++ G+ ++ +
Sbjct: 75 VVFTVTEDAKILTTWFGRTFIRSCCKLSYEDAQGFIDHP-DRDWSSS---GFVKVDEPYT 130
Query: 431 WSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF-LFDEYGTPYDSVLSGREDLNFL 489
D+ +++ L +++ ++ RF GALRL+ K F L +E G P + N+L
Sbjct: 131 IMDICQNVLKLNDLATKMRKSRFHSGALRLDQVKSTFSLNNETGLPLGIAPYISKQSNWL 190
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFH 549
EE+ML ANK+ AE +A+ PDSA LRRHP+P++++L E + + G+ ++ S+G
Sbjct: 191 IEEWMLAANKSVAERLAKYLPDSAFLRRHPSPSVKQLTEVSSSLNVAGININIDSAGSIQ 250
Query: 550 QSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
L + L+ + L + + T+ M LA YFC G + HYAL +YTHFTS
Sbjct: 251 DKL--PLKTLEHEARLL-VTVALLTKTMNLAVYFCLGLLPSELSPAHYALNMQLYTHFTS 307
Query: 610 PLRRYPDLVVHRTLNAAL-----EAEKLYWKHRRMLPK 642
P+RRY D++VHR L+A L + EK W PK
Sbjct: 308 PIRRYADVIVHRQLSAILAKEESDPEKADWYLSTAFPK 345
>gi|448114783|ref|XP_004202663.1| Piso0_001511 [Millerozyma farinosa CBS 7064]
gi|359383531|emb|CCE79447.1| Piso0_001511 [Millerozyma farinosa CBS 7064]
Length = 988
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 166/449 (36%), Positives = 236/449 (52%), Gaps = 39/449 (8%)
Query: 205 ELVAARI----DEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSC 260
EL+ RI D W+ S +PQ H + G E + A+L E+ + FS LSC
Sbjct: 436 ELLGKRIVVVVDSWSSNSKYPQGHFVRCLGDVESAEAETEALLLEHDVEYRPFSKSVLSC 495
Query: 261 LP--CVPWEV-----PQE-ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
LP W V P++ + R DLR+ + +IDP D+DDAL +L +G VG
Sbjct: 496 LPEDGDNWTVENNSNPEDPKFAKRVDLRDRLVCSIDPPNCVDIDDALHARKLPNGNYEVG 555
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADV++FV TALD EA R TSVY+++++I MLP++L + SL P VDR AFS+
Sbjct: 556 VHIADVTHFVRANTALDAEAASRGTSVYLVEKRIDMLPMVLGTNLCSLKPYVDRFAFSVI 615
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
W+++ ++V +++I+S +YE AQ ID K +
Sbjct: 616 WEVDEDANIVKVDFMKSIIKSRKAFAYEEAQIRIDDK-------------------TQND 656
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFE 491
++ +S++ L +SK LK KR GAL L + + V + +E P + + + N L E
Sbjct: 657 ELTQSMRILLNLSKKLKSKRVKAGALNLASPEVKVHMDNETSDPGEVEIKQLLETNSLVE 716
Query: 492 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAF--CSKHGLQLDTSSSGQFH 549
EFML AN + A I A+ +A+LRRH AP E K G+ L SS
Sbjct: 717 EFMLFANISVARKIFDAYSQTAMLRRHAAPPATNFEELNNMLRARKKGMALSLESSKALA 776
Query: 550 QSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 608
SL++ ++ KD Y F+ L+ +TR M A YF SG + W HY LA +YTHFT
Sbjct: 777 DSLDRCMDE-KDPY--FNTLLRIMSTRCMMAAEYFPSGSYGYPEFW-HYGLAVDIYTHFT 832
Query: 609 SPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
SP+RRY D+VVHR L A+ E+L HR
Sbjct: 833 SPIRRYCDVVVHRQLAGAIGYEQLDLSHR 861
>gi|407451488|ref|YP_006723212.1| hypothetical protein B739_0712 [Riemerella anatipestifer RA-CH-1]
gi|403312473|gb|AFR35314.1| hypothetical protein B739_0712 [Riemerella anatipestifer RA-CH-1]
Length = 721
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 226/430 (52%), Gaps = 35/430 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V ++ EWN P ++ V G G E +I++IL E + + F E +
Sbjct: 194 VVVKMVEWNPTEKNPHGEIVKVLGTPGSHETEIHSILAEYGLPYA-FPEEVEQEADAIDR 252
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
E+ +E+ R D+R C FTIDP A D DDALSI +L +G +GVHIADVS++V+P T
Sbjct: 253 EIRDDEVKKRWDMRGICTFTIDPKDAKDFDDALSIRKLENGNWEIGVHIADVSHYVVPNT 312
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R +PMLP +LS EV SL P D+ FS ++LN ++ +W
Sbjct: 313 LLDQEAYQRATSVYLVDRVVPMLPEVLSNEVCSLRPNEDKYTFSAVFELNDKAEIKKQWF 372
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
GRTVI S + +YE AQ+ I+ G+G D+ I +L +++K
Sbjct: 373 GRTVIHSDRRFTYEEAQERIE----------TGKG-----------DLADEILTLDKLAK 411
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
IL+++R GA+ + S+ F DE P +D N L EEFMLLAN+ +E I+
Sbjct: 412 ILREERIRKGAITFDRSEVRFNLDENNEPIGVYFKVSKDSNHLIEEFMLLANRKVSEFIS 471
Query: 507 ---RAFP--DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
+ P + + R H P+ KL F + G +++ ++S + +S+ + + +K
Sbjct: 472 LNKKGSPTGKTFIYRVHDDPDPTKLEALRDFVATFGYKMNLANSQKVAESMNELLKSVKG 531
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+++ A R M A Y GHY L F YTHFTSP+RRYPDL+ HR
Sbjct: 532 KGEE-NMIETLAMRSMSKAIYSTEP-------IGHYGLGFEYYTHFTSPIRRYPDLIAHR 583
Query: 622 TLNAALEAEK 631
L L+ K
Sbjct: 584 LLQHYLDQGK 593
>gi|312070717|ref|XP_003138275.1| hypothetical protein LOAG_02690 [Loa loa]
Length = 956
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 230/440 (52%), Gaps = 38/440 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
+ ID W +S +P H + G G+ E + +L E+ + FS +CLP +PW
Sbjct: 404 IIVAIDNWPRDSRYPVGHYVRSIGVAGDRETENEVLLLEHDVPHGPFSDAVYACLPRIPW 463
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH-----------I 315
++P E RKDLR+ I ++DP TD+DDA +++ V +H I
Sbjct: 464 QMPDEN--HRKDLRSLTICSVDPPGCTDIDDAFHCIQIASDRYEVIIHHYFLILYNFILI 521
Query: 316 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 375
++ ++ TA+D EA R T+VY+ ++I MLP LLS ++ SL VDRLAFS+ W L
Sbjct: 522 SEYVIIIISDTAMDAEAAHRGTTVYLCDKRIDMLPELLSSDLCSLRENVDRLAFSVIWTL 581
Query: 376 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVV 435
S D++D +++IRS L+YE AQ+ ID + S T+G
Sbjct: 582 TSDADIIDTKFHKSLIRSSGALTYEQAQNRIDDP-SLSDSVTVG---------------- 624
Query: 436 RSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFM 494
+++L E+SK LK KR +GAL L +S+ F D E P N + EEFM
Sbjct: 625 --LRTLLELSKKLKAKRHANGALTLASSEIRFSIDSETKDPISVQEKKMLATNSMVEEFM 682
Query: 495 LLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 554
LLAN + AE I FPD ALLRRHP P + G +++ S +SL++
Sbjct: 683 LLANISVAERITSDFPDCALLRRHPIPPEENYKPVIDMAKAKGFKMNVESGKALSESLDK 742
Query: 555 AREKLKDDYVLFDILINY-ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
A + ++ V+ + L TR M A YF SG + + H+ LA P+YTHFTSP+RR
Sbjct: 743 A---VDENNVMLNTLFRMLTTRCMTQAVYFSSGSLPTE-QYVHFGLAAPIYTHFTSPIRR 798
Query: 614 YPDLVVHRTLNAALEAEKLY 633
Y D++VHR L+A++ A+ +
Sbjct: 799 YADIMVHRLLSASIYADSTF 818
>gi|402831931|ref|ZP_10880601.1| ribonuclease R [Capnocytophaga sp. CM59]
gi|402280364|gb|EJU29075.1| ribonuclease R [Capnocytophaga sp. CM59]
Length = 732
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 233/443 (52%), Gaps = 28/443 (6%)
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
E+GD V RI +W + P V + G+ GE +I+AIL E + S F
Sbjct: 183 EDGDK------VLVRITQWTSRANSPYGVVEKILGKPGEHNTEIHAILAEYGL-PSEFPQ 235
Query: 256 ESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHI 315
E + + + +EE+ R+D+R FTIDP A D DDALS L +G VGVHI
Sbjct: 236 EVEAYAQQLDTTIKEEEIARRRDMRGVLTFTIDPRDAKDFDDALSFRVLENGNFEVGVHI 295
Query: 316 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 375
ADVS++V PGT LD EA R+TSVY++ R +PMLP +LS SL P ++ FS ++L
Sbjct: 296 ADVSHYVQPGTILDDEAYQRATSVYLVDRVVPMLPEVLSNFACSLRPEEEKYTFSAIFEL 355
Query: 376 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEG-WPQLY-----GQF 429
+ +V + W+GRTVIRS + +YE AQ +I+ FD L + P+ G +
Sbjct: 356 SPQAEVRNVWLGRTVIRSDARFAYEEAQAVIEA-FDTPYMEVLSDFVMPEEISIRPEGSY 414
Query: 430 EWS-DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNF 488
S +V +I SL +++IL++KR GA+ + + F DE P ++ N
Sbjct: 415 TVSKKIVEAILSLNAMAEILREKRMRAGAISFDKLEVKFFLDENNNPLGVYTKESKEANK 474
Query: 489 LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 548
L EEFMLLAN+ AE A + + R H P+ KL + + S+ G +L+
Sbjct: 475 LIEEFMLLANRKVAEY-ASKLQKTFVYRIHDVPDEEKLLQMQGVISRFGYKLNLKDKKNI 533
Query: 549 HQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTH 606
S+ +++ K + L D L A R M A+Y + GHY LAF YTH
Sbjct: 534 SHSINHLLQEVHGKKEQNLVDTL---AIRSMSKAAYSTH-------NIGHYGLAFADYTH 583
Query: 607 FTSPLRRYPDLVVHRTLNAALEA 629
FTSP+RRYPD++VHR L L+A
Sbjct: 584 FTSPIRRYPDVMVHRLLQLYLDA 606
>gi|423226569|ref|ZP_17213034.1| ribonuclease R [Bacteroides cellulosilyticus CL02T12C19]
gi|392629048|gb|EIY23064.1| ribonuclease R [Bacteroides cellulosilyticus CL02T12C19]
Length = 714
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 156/433 (36%), Positives = 226/433 (52%), Gaps = 53/433 (12%)
Query: 209 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 267
++ EW +++ P V+ + G+ G+ +++AIL E + P S+ +P E
Sbjct: 193 VKVIEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPSSVEKAADKIPAE 250
Query: 268 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 327
+ EE+ R+D RN FTIDP A D DDALSI +L DG+ VGVHIADV+++V G+
Sbjct: 251 ISDEEIAKREDFRNVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVTEGST 310
Query: 328 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 387
+D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S+ +++N GDV D +
Sbjct: 311 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFNINEKGDVKDSRVV 370
Query: 388 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 447
TVI+S + +YE AQ II+ K EG D I L ++K
Sbjct: 371 HTVIKSDRRFTYEEAQQIIETK----------EG-----------DFKEEILMLDTIAKA 409
Query: 448 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-- 505
L+ KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I
Sbjct: 410 LRQKRFVAGAINFDRYEVKFEIDEKGKPISVYFKVSKDANKLVEEFMLLANRTVAEKIGR 469
Query: 506 ------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQ 554
A+ FP R H P+ KL F ++ G ++ T S + L+
Sbjct: 470 VPKNKKAKVFP----YRIHDLPDPEKLDNLAQFIARFGYKIRTGGTKTDVSKSINHLLDD 525
Query: 555 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 614
+ K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+
Sbjct: 526 IQGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRF 573
Query: 615 PDLVVHRTLNAAL 627
PD++VHR L L
Sbjct: 574 PDMMVHRLLTKYL 586
>gi|164662369|ref|XP_001732306.1| hypothetical protein MGL_0081 [Malassezia globosa CBS 7966]
gi|159106209|gb|EDP45092.1| hypothetical protein MGL_0081 [Malassezia globosa CBS 7966]
Length = 940
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 186/548 (33%), Positives = 269/548 (49%), Gaps = 78/548 (14%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKK-NRSSLSVPDREYIQLTP 172
++P GRVV I R+ W +Y + DA N +L+ + + +P
Sbjct: 306 RQPMGRVVGIARRN--------------WRSYV--AHIDASTVNEGALATLGPQTLFASP 349
Query: 173 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
K P+ IK R + A I +++ A +DEW S +P+ H + G
Sbjct: 350 VDRKIPR-----------IKIRTRQAGALIGCKILVA-MDEWKSTSRYPEGHFIRSLGAI 397
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELL------------SRKD 278
E + ++L E + FS L+CLP W VP ++ +R D
Sbjct: 398 ESKEAEQESLLLEFDVPYRPFSKAILACLPAEGDAWTVPPKDAALEGETRAAKIWQNRVD 457
Query: 279 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 338
LR I +IDP D+DDAL +RL +G GVHIADVS+FV P T +D EA R T+
Sbjct: 458 LRAETICSIDPPGCQDIDDALHAKRLPNGNIEAGVHIADVSFFVRPDTPMDAEAASRGTT 517
Query: 339 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 398
VY++ R+I MLP LL + SL P V+RLAFS+ W++ VV ++VI S +
Sbjct: 518 VYLVDRRIDMLPHLLGTNLCSLRPYVERLAFSVVWEMTPDAQVVQARFFKSVIASKAAFT 577
Query: 399 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 458
Y+ AQ D D++ ++T+ E SI+ L ++ L++ R + GAL
Sbjct: 578 YKEAQTRKD---DMKQTDTITE----------------SIRLLNHLAIKLREARMSAGAL 618
Query: 459 RLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 516
L + + + E P D + N L EEFMLLAN + A I A+P +A+LR
Sbjct: 619 NLASPEVRIHLESAESSAPIDVEQKEVLETNSLVEEFMLLANTSVARRIYEAYPTTAVLR 678
Query: 517 RH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-Y 572
RH PA N L++ + + LD SSSG SL++ +K F+ L+
Sbjct: 679 RHVPPPADNFETLQDI--LKKRRNMDLDVSSSGALAASLDKCIDKRDP---AFNTLVRIL 733
Query: 573 ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE-- 630
ATR M A YFC+G + +GHY LA +YTHFTSP+RRY D++ HR L AA++ E
Sbjct: 734 ATRCMLSAEYFCTGSVPRNA-FGHYGLAMDMYTHFTSPIRRYADVLAHRQLAAAIQYEPL 792
Query: 631 --KLYWKH 636
LY KH
Sbjct: 793 PSNLYSKH 800
>gi|429752870|ref|ZP_19285703.1| ribonuclease R [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429175557|gb|EKY16995.1| ribonuclease R [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 763
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 155/426 (36%), Positives = 226/426 (53%), Gaps = 16/426 (3%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VP 265
V RI++W ++S P V + G+ GE ++++IL E + + PE + +
Sbjct: 224 VIVRIEDWKDKSDSPMGVVEQILGKPGEQTTEMHSILAEYGLPYT--YPEEVEAFAKKLD 281
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
+ EE+ R+D+R FTIDP A D DDALS + L +G +GVHIADVS++V G
Sbjct: 282 LSITDEEIARRRDMRETLTFTIDPRDAKDFDDALSFKLLENGNYEIGVHIADVSHYVKEG 341
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
T LD EA R+TSVY++ R +PMLP +L SL P D+ FS +++N +VVD W
Sbjct: 342 TILDEEAYNRATSVYLVDRVVPMLPEILCNFACSLRPDEDKYTFSAVFEMNKKAEVVDIW 401
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 445
IGRTV S + +YE AQ +I+ E E + ++VV +I +L ++
Sbjct: 402 IGRTVTHSSFRFAYEEAQSVIEQAKVGEEYTIPAETSITDKERSVPANVVEAILTLNILA 461
Query: 446 KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI 505
+ L+ KR GA+ + + F DE G P ++ N L EEFMLLAN+ AE +
Sbjct: 462 EKLRGKRMRLGAITFDKVEVKFDLDENGNPTGVYFKESKEANKLIEEFMLLANRKVAEYV 521
Query: 506 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDY 563
A+ + + R H P+ KL++F ++ G LD + SL E++ K +
Sbjct: 522 AK-MKKTFVYRVHDEPDADKLQQFNTVINRFGYSLDLKNRQTTTDSLNNLLEEVKGKKEQ 580
Query: 564 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
L D L A R M A+Y + GHY LAF YTHFTSP+RRYPD++VHR L
Sbjct: 581 NLVDTL---AIRSMAKATYTTK-------NIGHYGLAFDYYTHFTSPIRRYPDVMVHRLL 630
Query: 624 NAALEA 629
L+
Sbjct: 631 QLYLDG 636
>gi|365763226|gb|EHN04756.1| Dis3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1001
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 259/497 (52%), Gaps = 50/497 (10%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
++++ K LP ++ R ++ +V + ID W +P H + G + +
Sbjct: 424 VILMXKCLP-KVRIRTRRAAELLDKRIVIS-IDSWPTTHKYPLGHFVRDLGTIESAQAET 481
Query: 240 NAILYENAICCSGFSPESLSCLPCV------------PWEVPQEELLS-RKDLRNFCIFT 286
A+L E+ + FS + L CLP P V ++ LL+ RKDLR+ I +
Sbjct: 482 EALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPLLTKRKDLRDKLICS 541
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E R TSVY++ ++I
Sbjct: 542 IDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEGAARGTSVYLVDKRI 601
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIRS SYE AQ I
Sbjct: 602 DMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSYEQAQLRI 661
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-P 465
D K ++ L G +++L ++S LK KR GAL L + +
Sbjct: 662 DDK---TQNDELTMG----------------MRALLKLSVKLKQKRLEAGALNLASPEVK 702
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP---N 522
V + E P + + N L EEFMLLAN + A I AFP +A+LRRH AP N
Sbjct: 703 VHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAAPPSTN 762
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
L E ++ + + SS SL++ + +D Y F+ L+ +TR M A
Sbjct: 763 FEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNTLVRIMSTRCMMAAQ 817
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR---- 637
YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 818 YFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNK 876
Query: 638 -RMLPKNNHREGVRGRF 653
M+ +N +R+ +F
Sbjct: 877 MDMICRNINRKHRNAQF 893
>gi|409074552|gb|EKM74947.1| hypothetical protein AGABI1DRAFT_80468 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 995
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 259/535 (48%), Gaps = 69/535 (12%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVPDREYIQLT 171
++PTGRVV II+R+ W Y S N +SL+ ++ + T
Sbjct: 374 RQPTGRVVGIIKRN--------------WRAYVCHIDSTSLTSLNATSLA---QQTVFAT 416
Query: 172 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
P P++ + + P I ++ + ID W+ S +P+ H + G+
Sbjct: 417 PVSRLLPRIRLRTRQAPMLIGQK------------ILVTIDRWDINSRYPEGHFVRSLGK 464
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVP-----QEELLSRKDLRNFCI 284
E + +++ E + F L CLP W VP E +R+DLR I
Sbjct: 465 VESKEAEQESLMLEFDVRYRPFGKAILDCLPPEGEQWVVPLKDDVNPEWKNREDLRQLLI 524
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL L +G GVHIADVS+FV T +D EA R T+VY++ R
Sbjct: 525 CSIDPPGCQDIDDALHARPLPNGNIEAGVHIADVSHFVHADTPIDNEAADRGTTVYLVDR 584
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP LL + SL P V+RLAFS W+L ++V+ ++VI S +YE AQ
Sbjct: 585 RIDMLPSLLGTNLCSLRPFVERLAFSAIWELTPEAEIVNVRFTKSVIASKAAFTYEEAQI 644
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
D P + D+ SI+ L ++K LK+KR GAL L + +
Sbjct: 645 RKDD--------------PN-----QQDDLSHSIRLLNTLAKKLKEKRMKAGALNLASPE 685
Query: 465 PVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---P 519
D E P D + N L EEFMLLAN + AE I FP +A+LRRH P
Sbjct: 686 VKIYLDSSESSDPIDVEQKELRETNSLVEEFMLLANISVAEKIQETFPQTAVLRRHLPPP 745
Query: 520 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQ 578
N KL++ + G++LD SSS SL+ + + F+ L+ ATR M
Sbjct: 746 KANFEKLQDI--LMKRRGIKLDVSSSRALADSLDTCVDPQEPS---FNTLVRIMATRCML 800
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
A YFCSG DT +GHY LA +YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 801 SAEYFCSGSVARDT-FGHYGLASAIYTHFTSPIRRYADVLAHRQLAAAIGNSPLH 854
>gi|444319726|ref|XP_004180520.1| hypothetical protein TBLA_0D05070 [Tetrapisispora blattae CBS 6284]
gi|387513562|emb|CCH61001.1| hypothetical protein TBLA_0D05070 [Tetrapisispora blattae CBS 6284]
Length = 997
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 170/455 (37%), Positives = 238/455 (52%), Gaps = 47/455 (10%)
Query: 205 ELVAARI----DEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSC 260
ELV RI D W +P H + G V+ + ++L E+ + FS + L C
Sbjct: 439 ELVGRRIVISVDSWPANHKYPLGHFVRDLGEVESVQAETESLLLEHDVEYRPFSKKVLDC 498
Query: 261 LPCV--PWEVPQE-----------ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDG 307
LP W+VP + +L RKDLR+ I +IDP D+DDAL ++L +G
Sbjct: 499 LPSEGHEWKVPSDLTSSDALAKDPQLARRKDLRDKLICSIDPPGCVDIDDALHAKKLPNG 558
Query: 308 ISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRL 367
VGVHIADV++FV P T LD E R TSVY++ ++I MLP+LL ++ SL P VDR
Sbjct: 559 NWEVGVHIADVTHFVKPNTPLDAEGASRGTSVYLVDKRIDMLPLLLGTDLCSLKPYVDRY 618
Query: 368 AFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYG 427
AFS+ W+L+ ++VD ++VIRS SYE AQ ID K ++ L +G
Sbjct: 619 AFSVLWELDDNANIVDVNFTKSVIRSREAFSYEQAQIRIDDK---SQTDELTQG------ 669
Query: 428 QFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDL 486
+++L ++S LK KR GAL L + + V + E P + +
Sbjct: 670 ----------MRALLKLSIKLKQKRLDAGALNLASPEVKVHMDSETSDPNEVEIKKLLAT 719
Query: 487 NFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRKLREFEAFCSKHGLQLDTS 543
N L EEFMLLAN + A I +FP +A+LRRH P+ N L E + + +
Sbjct: 720 NSLVEEFMLLANISVARKIFESFPQTAMLRRHGVPPSTNFETLNEM--LHQRKQMTISLE 777
Query: 544 SSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFP 602
SS SL++ + KD Y F+ LI +TR M A YF SG + +++ HY LA
Sbjct: 778 SSKALADSLDRCVDP-KDPY--FNTLIRIMSTRCMMAAQYFYSGAYS-YSEFRHYGLAVD 833
Query: 603 VYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
+YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 834 IYTHFTSPIRRYCDVVAHRQLAGAIGYEPLDLSHR 868
>gi|323346611|gb|EGA80897.1| Dis3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 1001
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 259/497 (52%), Gaps = 50/497 (10%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
++++ K LP ++ R ++ +V + ID W +P H + G + +
Sbjct: 424 VILMXKCLP-KVRIRTRRAAELLDKRIVIS-IDSWPTTHKYPLGHFVRDLGTIESAQAET 481
Query: 240 NAILYENAICCSGFSPESLSCLPCV------------PWEVPQEELLS-RKDLRNFCIFT 286
A+L E+ + FS + L CLP P V ++ LL+ RKDLR+ I +
Sbjct: 482 EALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPLLTKRKDLRDKLICS 541
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E R TSVY++ ++I
Sbjct: 542 IDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEGAARGTSVYLVDKRI 601
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIRS SYE AQ I
Sbjct: 602 DMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSYEQAQLRI 661
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-P 465
D K ++ L G +++L ++S LK KR GAL L + +
Sbjct: 662 DDK---TQNDELTMG----------------MRALLKLSVKLKQKRLEAGALNLASPEVK 702
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP---N 522
V + E P + + N L EEFMLLAN + A I AFP +A+LRRH AP N
Sbjct: 703 VHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAAPPSTN 762
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
L E ++ + + SS SL++ + +D Y F+ L+ +TR M A
Sbjct: 763 FEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNTLVRIMSTRCMMAAQ 817
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR---- 637
YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 818 YFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNK 876
Query: 638 -RMLPKNNHREGVRGRF 653
M+ +N +R+ +F
Sbjct: 877 MDMICRNINRKHRNAQF 893
>gi|86144129|ref|ZP_01062466.1| putative exoribonuclease [Leeuwenhoekiella blandensis MED217]
gi|85829391|gb|EAQ47856.1| putative exoribonuclease [Leeuwenhoekiella blandensis MED217]
Length = 734
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 173/525 (32%), Positives = 256/525 (48%), Gaps = 58/525 (11%)
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 172
+K+ G +V I+ER + D VG + + + F + S + K R+ + VP
Sbjct: 132 SKKHEGEIVEILER--KTDEFVGVVQMQKNFAFVNTSAEG--KMRTDIFVP--------- 178
Query: 173 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
K +L + + E V +I++W E++ P ++ V G
Sbjct: 179 -------------------KNKL---NGAQDGEKVLVKIEDWPEKADSPFGKIIKVLGLP 216
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
GE +I++IL + + F E + + + EE+ R+D+R+ FTIDP A
Sbjct: 217 GEHNTEIHSILAQYGLPHD-FPNEVEAYANTIDTSIKPEEIAKRRDMRDVLTFTIDPKDA 275
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D DDALS + L +G VG+HIADVS++V+PGT LD EA R+TSVY++ R +PMLP +
Sbjct: 276 KDFDDALSFQVLENGNYEVGIHIADVSHYVVPGTILDEEAYERATSVYLVDRVVPMLPEV 335
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
LS SL P ++ FS ++L+ S+G V +W GRTV S + +YE AQ II
Sbjct: 336 LSNNACSLRPNEEKYTFSAVFELDKSSGKVKKQWFGRTVTYSDARFAYEEAQQII----- 390
Query: 412 VESSNTLGEGWPQLYGQFEWSD--VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
E+ L L G+ D +V + L ++KI++ +R DGA+ + + F
Sbjct: 391 -ETREGLIPEDISLTGKSYNVDPAIVNATLELDRIAKIMRRQRMKDGAISFDKVEVKFEL 449
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR-HPAPNMRKLRE 528
D+ P +D N L EEFMLLAN+ AE I + P + R H PN KL
Sbjct: 450 DQENDPVGVFFKSSKDANKLIEEFMLLANRKVAEFIGKQSPKKTFVYRIHDEPNDEKLAA 509
Query: 529 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSG 586
+ + G +++ SL + K + L D L A R M A Y
Sbjct: 510 LQTIAGRFGYKMNLKDRKSTTASLNNLLTDVVGKKEQNLIDTL---AIRTMSKAVYSTE- 565
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
+ GHY LAF YTHFTSP+RRYPD++VHR L L+ K
Sbjct: 566 ------NIGHYGLAFDYYTHFTSPIRRYPDVMVHRLLQHYLDQGK 604
>gi|332291802|ref|YP_004430411.1| ribonuclease R [Krokinobacter sp. 4H-3-7-5]
gi|332169888|gb|AEE19143.1| ribonuclease R [Krokinobacter sp. 4H-3-7-5]
Length = 734
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 171/543 (31%), Positives = 265/543 (48%), Gaps = 58/543 (10%)
Query: 95 NDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAK 154
N +N E + +K+ G + II+R + + VG + + + F
Sbjct: 113 NKALNGDEVEVYIYRQRRSKKHEGEITKIIKR--KTEEFVGVVKLQKKF----------- 159
Query: 155 KNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEW 214
++ + ++ Y + V +K L + E+GD V I++W
Sbjct: 160 -----------AFVLTSESNKMYTDVFVPLKKLG-----KAEDGDK------VVVTIEDW 197
Query: 215 NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELL 274
+++ P + V G+ GE +I++IL + + F E + + EE+
Sbjct: 198 PDKADSPFGRITKVLGKPGEHNTEIHSILAQYGLPYE-FPEEVEEFANKIDTSIKAEEIA 256
Query: 275 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 334
R+D+R+ +TIDP A D DDALS ++L +G +G+HIADVS++++PGT LD EA
Sbjct: 257 KRRDMRDVLTYTIDPKDAKDFDDALSFQKLENGNYEIGIHIADVSHYLVPGTILDDEAYE 316
Query: 335 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS-AGDVVDRWIGRTVIRS 393
R+TSVY++ R +PMLP +LS SL P ++ FS +++ + +G +VD W GRTV S
Sbjct: 317 RATSVYLVDRVVPMLPEILSNGACSLRPHEEKYTFSAVFEMKADSGKIVDSWYGRTVTYS 376
Query: 394 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ-FEWSD-VVRSIKSLYEVSKILKDK 451
+ +YE AQ II ES + L L G+ ++ SD +V + + ++KI++ +
Sbjct: 377 DARFAYEEAQAII------ESRSNLIPAEVSLTGEAYKVSDELVEATLEMDRIAKIMRRQ 430
Query: 452 RFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD 511
R DGA+ + + F D+ P +D N L EEFMLLAN+ +E I + P
Sbjct: 431 RMKDGAISFDKVEVKFKLDDDMNPEGVYFKTSKDANKLIEEFMLLANRKVSEFIGKQAPK 490
Query: 512 SALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDI 568
+ R H PN KL E K G +LD SL Q + K + + D
Sbjct: 491 KTFVYRIHDEPNDEKLASLEKVIGKFGYKLDLKDRKTTTSSLNQLLTDVQGKKEQNMVDT 550
Query: 569 LINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
L A R M A Y + GHY LAF Y+HFTSP+RRYPD++VHR L L+
Sbjct: 551 L---AIRTMSKAVYSTD-------NIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQHYLD 600
Query: 629 AEK 631
K
Sbjct: 601 GGK 603
>gi|156101367|ref|XP_001616377.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148805251|gb|EDL46650.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1000
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/441 (36%), Positives = 229/441 (51%), Gaps = 38/441 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V ID+W+ S +P L V G ++E + I E I FS + CLP W
Sbjct: 459 VIVVIDKWDYNSKYPLGRCLSVLGICDDIETETKLIYNEYNISTKEFSESAYKCLPPNDW 518
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDG--ISRVGVHIADVSYFVLP 324
+P+EE R+D RN F+IDP D+DDALS+ R+ +G + VGVHIADVSYFV
Sbjct: 519 AIPEEEYAKRRDFRNVITFSIDPPGCEDIDDALSV-RMMEGQNVIEVGVHIADVSYFVKQ 577
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
+ALD+EA R T+VY++ +++ MLP LL+ ++ SL G DRL +S + ++ VVD
Sbjct: 578 NSALDLEASKRCTTVYLINQRVEMLPKLLTTDLCSLVEGQDRLTYSCIFTFDANYQVVDI 637
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 444
+ + +IRS SYE AQ +ID D E S+ E +++ L +
Sbjct: 638 NVCKCIIRSNKSFSYEQAQKLID---DGEDSSPTAE----------------ALRLLNNI 678
Query: 445 SKILKDKRFTDGALRLE-NSKPVFLFDEYG-------TPYDSVLSGREDLNFLFEEFMLL 496
+K LK+K +GAL L NS+ +F F+ PY S D N L E FMLL
Sbjct: 679 AKHLKEKWLNEGALELRGNSEVLFEFESNDFSKTKNLKPYVSY-----DTNKLIEAFMLL 733
Query: 497 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ-LDTSSSGQFHQSLEQA 555
AN++ A +I + F +++LRRHP P L+E + + +S + S+
Sbjct: 734 ANRSVARIIYQGFKAASVLRRHPPPKNEHLKELNDYLESINIHDFKYGTSKELSHSINNI 793
Query: 556 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
LK+D VL +IL T+ M A + ++ HY LA +YT FTSP+RRY
Sbjct: 794 N--LKEDKVLCNILKILITKCMNEAVFISGYSVHNNEMLRHYGLAADIYTFFTSPIRRYA 851
Query: 616 DLVVHRTLNAALEAEKLYWKH 636
D++VHR LN E L K+
Sbjct: 852 DIMVHRVLNHIYGVENLDSKY 872
>gi|284040706|ref|YP_003390636.1| ribonuclease R [Spirosoma linguale DSM 74]
gi|283819999|gb|ADB41837.1| ribonuclease R [Spirosoma linguale DSM 74]
Length = 825
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 180/553 (32%), Positives = 266/553 (48%), Gaps = 98/553 (17%)
Query: 94 QNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDA 153
+N G NA R R G+V S++ER R +VG + V W Y G D+
Sbjct: 176 RNGGRNAARR-----------RIEGKVASVVERG--RTELVGRIEV--WPTY-GFVVPDS 219
Query: 154 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPD--SIKKRLEEGDATIEMELVAARI 211
KK + +P + K++V + PD S K+R E
Sbjct: 220 KKIYDDIFIPKEKLGGANDGE----KVIVRLTKFPDPNSSKQRFE--------------- 260
Query: 212 DEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE 271
V+ V G G+ +++AIL E + F + +P ++ ++
Sbjct: 261 -----------GEVITVLGVAGQNNTEMHAILAEFGLPIH-FPADVEKEAEAIPTKILKK 308
Query: 272 ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 331
+L R+D+R+ FTIDP A D DDALS++ L +G +G+HIADV+++VLPG+ L+ E
Sbjct: 309 DLAKRRDMRDVTTFTIDPIDAKDFDDALSVQILDNGNFEIGIHIADVTHYVLPGSKLEEE 368
Query: 332 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVI 391
A R+TSVY++ R +PMLP LS + SL P D+L FS +++ S +V+ W GRT I
Sbjct: 369 AFKRATSVYLVDRVVPMLPEKLSNGLCSLRPNEDKLTFSAVFEMTSDAKIVNEWFGRTAI 428
Query: 392 RSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDK 451
S + +YE AQDI++ SN+ D + ++ L E++ L+D+
Sbjct: 429 HSNRRFAYEEAQDILN-------SNS--------------GDYIEELRLLNELAYKLRDE 467
Query: 452 RFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR---- 507
RF +GA+ E + F DE G P R+D N L EEFMLLANK AE +
Sbjct: 468 RFKNGAINFETVEVRFRLDENGVPLAVYPKIRQDTNKLIEEFMLLANKRVAEFVHSLSKR 527
Query: 508 ---AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD------TSSSGQFHQSLEQAREK 558
++ + R H +P KLR F F K G +L+ ++S +F S+E E
Sbjct: 528 NKGGEENTMVYRVHESPAEDKLRSFSDFARKLGYKLNVDDEHLSNSMNRFMASIEGKPEA 587
Query: 559 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
++L A R M A Y D GH+ LAF Y+HFTSP+RRYPD++
Sbjct: 588 --------NMLQQLAVRTMSKARYSTE-------DLGHFGLAFKRYSHFTSPIRRYPDMM 632
Query: 619 VHRTLNAALEAEK 631
HR L L+ K
Sbjct: 633 AHRLLQHYLDKGK 645
>gi|86134792|ref|ZP_01053374.1| ribonuclease R [Polaribacter sp. MED152]
gi|85821655|gb|EAQ42802.1| ribonuclease R [Polaribacter sp. MED152]
Length = 739
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 153/431 (35%), Positives = 227/431 (52%), Gaps = 18/431 (4%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V A I +W E S P + V G+ G+ ++++IL E + F PE +P
Sbjct: 192 VQATISDWPENSKNPFGKITTVLGKPGDHNTEMHSILLEYDLPYE-FEPEVEKEAQELPI 250
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
E+ +E+ R+D+RN FTIDP A D DDALS +L +G +G+HIADVS+++ P T
Sbjct: 251 EITDKEIAKRRDMRNDLTFTIDPKDAKDFDDALSFTKLENGNYEIGIHIADVSHYLQPKT 310
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R +PMLP +LS V SL P ++L FS +++N + +W
Sbjct: 311 ILDDEAYDRATSVYLVDRVVPMLPEMLSNGVCSLRPNEEKLTFSAVFEINEKAQIKKQWF 370
Query: 387 GRTVIRSCCKLSYEHAQDIIDG---KFDVESSNTLGEGWPQLYGQFEW-SDVVRSIKSLY 442
GRTV S + +YE AQ II+ DV+ T+ E +E ++VV + L
Sbjct: 371 GRTVTYSDQRFAYEEAQYIIENCKLSDDVQPF-TMPENVSITDSAYEVKAEVVEATLQLD 429
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
+++KIL+ KR GA+ + + F DE P +D N L EEFMLLAN+ A
Sbjct: 430 KLAKILRKKRMKQGAISFDRVEVKFNLDEEANPVGVFFKSSKDANKLIEEFMLLANRKVA 489
Query: 503 EVI----ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
E I + + + R H P++ KL + SK G +++T + +SL Q
Sbjct: 490 EYIGSKQGKPSNKTFIYRVHDEPDVEKLASLQNIISKFGYKINTETKESTSESLNQLLND 549
Query: 559 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
++ +++ A R M A Y + GHY LAF Y+HFTSP+RRYPD++
Sbjct: 550 VQGK-AESNMIETLAIRSMSKAVYTTQ-------NIGHYGLAFDYYSHFTSPIRRYPDVM 601
Query: 619 VHRTLNAALEA 629
HR L L+
Sbjct: 602 THRLLQLYLDG 612
>gi|167763926|ref|ZP_02436053.1| hypothetical protein BACSTE_02308 [Bacteroides stercoris ATCC
43183]
gi|167698042|gb|EDS14621.1| ribonuclease R [Bacteroides stercoris ATCC 43183]
Length = 719
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 225/429 (52%), Gaps = 45/429 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G+ G+ +++AIL E + P S+ +P E+
Sbjct: 198 KVVEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPASVEKAADRIPAEI 255
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
P EE R+D RN FTIDP A D DDALSI +L D + VGVHIADV+++V G+ +
Sbjct: 256 PAEEYAKREDFRNVTTFTIDPKDAKDFDDALSIRKLKDNLWEVGVHIADVTHYVTEGSII 315
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S +++ G+V + I
Sbjct: 316 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSAIFEMTDKGEVKNSRIVH 375
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI+S + +YE AQ II+ K EG D I L ++KIL
Sbjct: 376 TVIKSDRRFTYEEAQQIIETK----------EG-----------DFKEEILKLDSLAKIL 414
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRFT GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 415 REKRFTAGAINFDRYEVKFEIDEQGKPVSVYFKESKDANKLVEEFMLLANRTVAEKIGRV 474
Query: 509 ----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
P R H P+ KL F ++ G +L T S + L+ + K
Sbjct: 475 PKNKKPKVFPYRIHDLPDPEKLDNLAQFIARFGYKLRTGGTKTDVSKSINHLLDDIQGKK 534
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RRYPD++V
Sbjct: 535 EE-----NLIETVSIRAMQKARYSVH-------NIGHYGLAFDYYTHFTSPIRRYPDMLV 582
Query: 620 HRTLNAALE 628
HR L L+
Sbjct: 583 HRLLTKYLD 591
>gi|224537309|ref|ZP_03677848.1| hypothetical protein BACCELL_02187 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521084|gb|EEF90189.1| hypothetical protein BACCELL_02187 [Bacteroides cellulosilyticus
DSM 14838]
Length = 714
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 156/433 (36%), Positives = 226/433 (52%), Gaps = 53/433 (12%)
Query: 209 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 267
++ EW +++ P V+ + G+ G+ +++AIL E + P S+ +P E
Sbjct: 193 VKVIEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPSSVEKAADKIPAE 250
Query: 268 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 327
+ EE+ R+D RN FTIDP A D DDALSI +L DG+ VGVHIADV+++V G+
Sbjct: 251 ISDEEIAKREDFRNVSTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVTEGSI 310
Query: 328 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 387
+D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S+ +++N GDV D +
Sbjct: 311 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFNINEKGDVKDSRVV 370
Query: 388 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 447
TVI+S + +YE AQ II+ K EG D I L ++K
Sbjct: 371 HTVIKSDRRFTYEEAQQIIETK----------EG-----------DFKEEILMLDTIAKA 409
Query: 448 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-- 505
L+ KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I
Sbjct: 410 LRQKRFVAGAINFDRYEVKFEIDEKGKPISVYFKVSKDANKLVEEFMLLANRTVAEKIGR 469
Query: 506 ------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQ 554
A+ FP R H P+ KL F ++ G ++ T S + L+
Sbjct: 470 VPKNKKAKVFP----YRIHDLPDPEKLDNLAQFIARFGYKIRTGGTKTDVSKSINHLLDD 525
Query: 555 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 614
+ K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+
Sbjct: 526 IQGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRF 573
Query: 615 PDLVVHRTLNAAL 627
PD++VHR L L
Sbjct: 574 PDMMVHRLLTKYL 586
>gi|110636884|ref|YP_677091.1| exoribonuclease II [Cytophaga hutchinsonii ATCC 33406]
gi|110279565|gb|ABG57751.1| RNAse R [Cytophaga hutchinsonii ATCC 33406]
Length = 750
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 168/532 (31%), Positives = 253/532 (47%), Gaps = 76/532 (14%)
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 172
TK G +V I+ER +R VG + V+ R + VPD + +
Sbjct: 144 TKSAEGEIVEIVER--KRTSFVGRIEVSA---------------RHAFVVPDGRKMHVDI 186
Query: 173 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEW-NEESPFPQAHVLHVFGR 231
PK E + E V I W + P V V G
Sbjct: 187 FIPK-------------------EHINGAKTGEKVLVDITAWPTRDEKSPTGKVTEVLGM 227
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 291
GE E +++AIL E + F + + + E + E+ R+D+R FTIDP
Sbjct: 228 AGENETEMHAILAEFGLPYE-FPNQVIKAAQDITAETSEAEIKKRRDMRGTTTFTIDPED 286
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
A D DDA+S + L +G +GVHIADVS++V PG LD EA R+TSVY++ R +PMLP
Sbjct: 287 AKDFDDAISFKYLDNGNWEIGVHIADVSHYVQPGDTLDKEAYRRATSVYLVDRCVPMLPE 346
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
LS E+ SL P D+L FS +++++ V+D W GRT+I S + SYE AQ++I
Sbjct: 347 RLSNELCSLRPNEDKLTFSAIFEIDADAKVLDEWFGRTIIHSTRRFSYEQAQEVI----- 401
Query: 412 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDE 471
+ + D+V+ + L ++K ++ +RF +GA+ E + F D
Sbjct: 402 ----------------ETQQGDLVKELTILNTLAKKMRAQRFKEGAISFETVEVKFQLDA 445
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-----ARAFPDSALLRRHPAPNMRKL 526
G P V R+D + L EEFMLLANK AE + + ++ + R H APN KL
Sbjct: 446 KGKPLAVVPKVRKDAHKLIEEFMLLANKRVAEFVFNLRKGKGTSNTMVYRTHDAPNPEKL 505
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 586
F + G +++ ++L + ++++ ++L + A R M A Y
Sbjct: 506 ASLATFAKRFGHKVELDDENAIAKNLNKLSDEVEGKPEQ-NVLQSLAIRTMSKAIYSIEP 564
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE----AEKLYW 634
D H+ LAF Y+HFTSP+RRYPD++ HR L L+ A+K Y+
Sbjct: 565 DM-------HFGLAFKHYSHFTSPIRRYPDVMAHRLLQHYLDGGKSADKEYY 609
>gi|408398915|gb|EKJ78041.1| hypothetical protein FPSE_01829 [Fusarium pseudograminearum CS3096]
Length = 983
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 186/528 (35%), Positives = 259/528 (49%), Gaps = 59/528 (11%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT +VV +I+R+ R+ VG ++ + RK ++ + L P
Sbjct: 374 QPTAKVVGVIKRNWRQ--YVGHIDPSSASKASSQGRK-------------QDSVFLIPMD 418
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
K PK+ + + + D + KRL LV ID W +S P H + G
Sbjct: 419 KKIPKIRLRSRQVADLLGKRL----------LVT--IDGWERDSRHPIGHFVRSLGELET 466
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCIFTID 288
+ A+L E + F L CLP W VP R+DLR I +ID
Sbjct: 467 KSAETEALLLEWDVQYRPFPKTVLDCLPKEGHDWRVPTSMDDPGWRQREDLRGLLICSID 526
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P D+DDAL ++L +G VGVHIADVS FV P A+D EA +R T+VY++ ++I M
Sbjct: 527 PVGCQDIDDALHAKQLPNGNYEVGVHIADVSNFVKPANAMDTEASIRGTTVYLVDKRIDM 586
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP LL ++ SL P V+R AFS+ W+LN D+V+ ++VI+S SYE AQ ID
Sbjct: 587 LPPLLGTDLCSLKPYVERFAFSVLWELNDNADIVNVRFTKSVIKSREAFSYEQAQLRID- 645
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVF 467
+ D+ + ++ L +SK LK KR GAL L + + V
Sbjct: 646 ------------------DDSQQDDLTKGMRMLLMLSKKLKKKRMEAGALSLSSPEVKVQ 687
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
E P D D N L EEFML AN + A I AFP +A+LRRH AP
Sbjct: 688 TESETSDPIDVKTKQLLDTNSLVEEFMLFANISVAAKIYEAFPQTAILRRHGAPPKTNFD 747
Query: 528 EF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCS 585
E +K G++L T SS SL+Q + F+ L+ ATR M A YFCS
Sbjct: 748 ELSNQLRTKRGMELRTDSSKALADSLDQC---VDSKEPFFNTLVRIMATRCMMSAEYFCS 804
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
G + ++ HY LA +YTHFTSP+RRY DL+ HR L AA++ E ++
Sbjct: 805 GT-QAYPEFRHYGLASEIYTHFTSPIRRYADLLAHRQLAAAIDYEAIH 851
>gi|168027129|ref|XP_001766083.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682726|gb|EDQ69142.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1050
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 264/556 (47%), Gaps = 78/556 (14%)
Query: 103 RLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSV 162
R+ A+ RPTGRVV II+R+ R+ + + GGS + +
Sbjct: 343 RVDAVDGKSAPSRPTGRVVGIIKRNWRQ-----YCGSIEPMKMPGGSGGTVQ---ALFVS 394
Query: 163 PDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQ 222
DR + PK+ + + L + I KR + +D W S +P
Sbjct: 395 ADR----------RIPKIRIQTRQLANLIDKR------------IMVSVDSWEPTSRYPN 432
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLR 280
H + G G+ + + +L EN I FS L+CLP +PW ++E L+ R+DLR
Sbjct: 433 GHYVRTIGEIGDRATESDVLLLENDINSRPFSEAVLACLPPLPWSFSEQEHLNNQRQDLR 492
Query: 281 NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVY 340
+ +F++DP D+DDAL L D I ADV+ FVLP LD EA R TSVY
Sbjct: 493 HIRVFSVDPLGCRDIDDALHCTLLPDDI-------ADVTNFVLPNLPLDEEASQRGTSVY 545
Query: 341 MLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYE 400
+++R+I MLP L+E++ SL V+RLAFS W +NS ++ ++VI+SC +SY
Sbjct: 546 LVERRIDMLPKPLTEDICSLRADVERLAFSCIWVMNSEAEIESVRFTKSVIKSCAAMSYL 605
Query: 401 HAQDIIDGKFDVESSNTLGEGWPQLYGQF--EWSDVVRSIKSLYEVSKILKDKRFTDGAL 458
AQ +D +F W +F E S S + + I++ +R GAL
Sbjct: 606 EAQTRMDDRF-----------W-----RFSEEISITSTSRLTFLLLQHIMRLRRIERGAL 649
Query: 459 RLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 517
L + + F D E P D + + N + EEFML AN + A I FP +LLRR
Sbjct: 650 TLASPEVKFEIDTETHDPLDVGMYQVREANQMVEEFMLAANMSVAAKILEHFPSCSLLRR 709
Query: 518 HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPM 577
HP P + + G+ LD SSS +L+ A + DD ++ ATR M
Sbjct: 710 HPEPTPQMFEPLLRTAAAVGVTLDISSSKALADALDHA---VGDDPYFNKLIRIMATRCM 766
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP----------------DLVVHR 621
A YFCSG+ ++ HY LA P+YTHFTSP+RRY D++VHR
Sbjct: 767 TQAVYFCSGELS-YPEYLHYGLAAPLYTHFTSPIRRYAGTLALHFILFFRKLIGDVIVHR 825
Query: 622 TLNAALEAEKLYWKHR 637
L AAL L K R
Sbjct: 826 LLAAALGLNTLPEKLR 841
>gi|449015425|dbj|BAM78827.1| mitotic control protein dis3 [Cyanidioschyzon merolae strain 10D]
Length = 1048
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 193/575 (33%), Positives = 287/575 (49%), Gaps = 72/575 (12%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPT-GRVVSIIERSPRRDGIVGFLNVNQ 141
S TE+V ++ G + S ++S P++ P G++V+++ER +
Sbjct: 340 SSVTEQVVTAASALGSES----SDPLASTPSQGPRLGKIVAVLER--------------R 381
Query: 142 WFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDAT 201
W GS + AK +LS R P + P +++ KR
Sbjct: 382 WRAQYCGSLQ-AKYTADTLSFQGRRRHLFLPVDRRIPPILLETLQAASLYGKR------- 433
Query: 202 IEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCL 261
VA +D W+ +S FP HV+ V GR G+ + + +L EN I FS +L+CL
Sbjct: 434 -----VAVALDRWDTQSRFPVGHVVSVLGRIGDEQVETQVLLLENGIVTRPFSEAALACL 488
Query: 262 PCVPWEV---PQEE-LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS-------- 309
P + V P + L+ R DLR+ +F+IDP TD+DDAL RL D +
Sbjct: 489 PPPDFSVAPAPMDTTLVGRLDLRSMFVFSIDPPGCTDIDDALHC-RLVDRSNGQGANARA 547
Query: 310 ----RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVD 365
+VGVHIADV+ FV GTALD EA+ R +VY++ ++I MLP LL+ + SL G D
Sbjct: 548 STRLQVGVHIADVASFVRAGTALDEEARERGCTVYLVDQRIEMLPALLTSNLCSLVAGKD 607
Query: 366 RLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG-KFDVESSNTLGEGWP 423
R AFS+ ++L+ + + D R++IRS L+YE AQ ++D D +S+ L G P
Sbjct: 608 RYAFSVLFELDVESAQINDVQFTRSMIRSRASLTYEQAQLMLDALVVDKQSAKQL--GIP 665
Query: 424 QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGR 483
G+ ++ L V+ L+ +R +GAL L + P F+ S G
Sbjct: 666 PELGE--------ALPLLARVAGRLRAERLANGALIL--ASPEIRFERADGESPSPSVGS 715
Query: 484 E------DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHG 537
D + L EEFMLLAN T A+ I FP SA LRRHP P++ + + +G
Sbjct: 716 GSSCRSFDTHHLVEEFMLLANVTVAKRIVHQFPHSACLRRHPPPSVEQFEPLVRAAAAYG 775
Query: 538 LQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWG 595
+++ SS SL+ ++D +L ++ ATR M A+Y CS + +
Sbjct: 776 IEMHVDSSKALAASLDAVSTTSAGQEDPLLEELFRMLATRCMMQAAY-CSAGSAPASSYY 834
Query: 596 HYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
HY LA P+YTHFTSP+RRY D++VHR L A+L E
Sbjct: 835 HYGLAVPLYTHFTSPIRRYADIIVHRQLAASLGYE 869
>gi|373956721|ref|ZP_09616681.1| ribonuclease R [Mucilaginibacter paludis DSM 18603]
gi|373893321|gb|EHQ29218.1| ribonuclease R [Mucilaginibacter paludis DSM 18603]
Length = 711
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 225/431 (52%), Gaps = 34/431 (7%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
E A I +W E+ P + +V G+ GE + ++NAIL E S F E +
Sbjct: 186 EKALAEITDWPPEAKNPVGRIKNVLGKQGENDTEMNAILAEYGFPLS-FPAEVEHDAEAI 244
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
+ EE+ RKD R+ FTIDP A D DDALS + L +G +G+HIADVS++++P
Sbjct: 245 SDIITPEEIAKRKDFRDVLTFTIDPFDAKDFDDALSFKYLDNGNYEIGIHIADVSHYIIP 304
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
+ LD EA R TSVY++ R IPMLP LS + SL P D+L FS ++L+ V++
Sbjct: 305 DSPLDKEAFERGTSVYLVDRVIPMLPERLSNGLCSLRPNEDKLCFSAVFELDQNAFVINE 364
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 444
W G+T+I S + +YE Q+II+ G+G + ++ I L ++
Sbjct: 365 WFGKTIIHSNRRFTYEEVQEIIEN----------GDG-----------EYIKEITILNQL 403
Query: 445 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 504
+ L+D++F +GA+ E ++ F D G P + R+D + L E++MLLAN+ AE
Sbjct: 404 AYQLRDRKFKNGAISFETTEVKFKLDASGKPIGVYVKERKDAHKLIEDYMLLANRKVAEF 463
Query: 505 IARAFPD----SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 560
+A+ + + R H +P L F F ++ G +++T S + +SL E ++
Sbjct: 464 VAKKAKGKNKYTFVYRSHDSPKQETLAGFAQFAARFGYKINTKSDKEIARSLNHLMEDVE 523
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
++L A R M A Y HY LAF YTHFTSP+RRYPD++VH
Sbjct: 524 GKKEQ-NVLTQLAIRSMAKAIYTTK-------KTSHYGLAFDYYTHFTSPIRRYPDVMVH 575
Query: 621 RTLNAALEAEK 631
R L L+ K
Sbjct: 576 RLLQHYLDGGK 586
>gi|325187035|emb|CCA21578.1| DIS3like exonuclease 1 putative [Albugo laibachii Nc14]
gi|325189780|emb|CCA24260.1| DIS3like exonuclease 1 putative [Albugo laibachii Nc14]
Length = 1318
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 198/698 (28%), Positives = 321/698 (45%), Gaps = 100/698 (14%)
Query: 83 SDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQW 142
SD +SSS +D M ++E S + TGR++++I RS R I+ +
Sbjct: 351 SDDNPVLSSSPFDDVMLSVE-------STASGWATGRIINVISRSHR--VIIATIPSKM- 400
Query: 143 FNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATI 202
KGG + ++L++P ++ K+ + L KRL+
Sbjct: 401 --IKGG-------DNTALAIP---------VSMRFSKVRIRSNHLDILTDKRLK------ 436
Query: 203 EMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP 262
ID W +S +P H + + G +V +++AIL EN + S FS +++CLP
Sbjct: 437 ------IIIDSWPIDSAYPHGHYIGILGNVQDVTTEVSAILVENELIESPFSQAAIACLP 490
Query: 263 -------------------------CVPWEVPQEE--LLSRKDLRN-FCIFTIDPSTATD 294
+ WE+P EE + R+DLR +F++DP+ D
Sbjct: 491 RISEAVMESYQIAECCTAKRPSKCPLLEWEIPTEEFEMSLRRDLRTTHKVFSVDPAGCQD 550
Query: 295 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 354
+DDA+SI LS+G +GVHIADVSYFV P +ALD EA+ R TSVY++ +++ M+P +LS
Sbjct: 551 IDDAMSISVLSNGNIELGVHIADVSYFVKPESALDCEARRRGTSVYLVGQRLDMIPAVLS 610
Query: 355 EEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
++ SL+ DRLA S+ W++N+ V WIGRT +RSC L+YE A I+ K
Sbjct: 611 ADLCSLHHSRDRLAVSVIWEVNATSLAVVEDKTWIGRTAVRSCASLTYEQAHGILHNKPI 670
Query: 412 VESS-----NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
SS +G P + + ++ L ++++ L+ R +G L L S+ V
Sbjct: 671 PASSIPDNVGMVGGDIPNALKRH----LREGLQHLTQIARTLERSRMQNGGLDLSRSEEV 726
Query: 467 FL---FDEYGTPYDSVLSGRE-DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
+ P SV S +++ E M+L N T A+ I +AFP ALLRRH P+
Sbjct: 727 HIALGASNLKDPDVSVDSCENLEIHHTIAEIMILTNTTVAKKIFQAFPQHALLRRHLPPS 786
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
+ + +G++ D +++ QS+ + D +L + R MQ A Y
Sbjct: 787 SSRFSQVLDIARVNGIKFDPTTNSTLQQSILRCENSGVMDSKTMALLKSLVVREMQQAEY 846
Query: 583 FC-----------SGDFKD-DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
C + + KD D HY L YTHFTSP+RRY D+VVHR L ++
Sbjct: 847 ICAHEALAAPRMIAANAKDYDNRIAHYGLGVECYTHFTSPIRRYADIVVHRQLLQVVQES 906
Query: 631 KLYWKHRRML--PKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADI- 687
K +L P++ + L E +E R + + G P +
Sbjct: 907 SKITKPAILLPIPQSASMPLDQSDELLDDLIAHVHGELIECRPEETSPSRDVGTPGVPLT 966
Query: 688 -LVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVL 724
L+ + H N + + + C +L++ + + +++
Sbjct: 967 DLIQMTHHLNVKHQSAKRASQQCKELFLALYFSENKIV 1004
>gi|392575716|gb|EIW68849.1| hypothetical protein TREMEDRAFT_63316 [Tremella mesenterica DSM
1558]
Length = 1021
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 164/462 (35%), Positives = 239/462 (51%), Gaps = 36/462 (7%)
Query: 183 LVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAI 242
L + LP I+ R + + ++ +++ ID W+ S +P H + G+ E + ++
Sbjct: 433 LSRTLP-RIRLRTRQAPSLLDQKILVT-IDSWSINSRYPDGHFVRSLGKVESKEAEQESL 490
Query: 243 LYENAICCSGFSPESLSCLPCV--PWEVPQEE-----LLSRKDLRNFCIFTIDPSTATDL 295
L E + F L CLP W+VP +E R+DLR+ + +IDP D+
Sbjct: 491 LLEYEVPYRPFGKAILDCLPLEGEDWKVPSKEEGDVIWRDREDLRDLIVCSIDPPACQDI 550
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDAL L +G GVHIADVS+FVLP +D EA R T+VY++ ++I MLP LL
Sbjct: 551 DDALHARELPNGNIEAGVHIADVSHFVLPDNPMDSEAAARGTTVYLVDKRIDMLPALLGT 610
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+ SL P V+RLAFS+ W+L D+V+ ++VI S +YE AQ+ D D+ +
Sbjct: 611 NLCSLRPFVERLAFSVIWELTPEADIVNARFTKSVISSKEAFTYEAAQNRKD---DLSLN 667
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD--EYG 473
+ L +SI+ L ++ LK KR GAL L + + D E
Sbjct: 668 DPL----------------TQSIRLLNSLAIKLKSKRMKAGALSLSSPELKIHLDSSESA 711
Query: 474 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 533
P D + + N L EEFMLLAN + A I FP +A+LRRH P +
Sbjct: 712 EPIDVEQKHQRETNSLVEEFMLLANISVASKIQETFPGTAVLRRHSPPPKTNFEALQDVL 771
Query: 534 SKH-GLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDD 591
+K + LD SSSG +SL+ + + + F+ L+ ATR M A YFCSG +
Sbjct: 772 TKRKNMGLDVSSSGALARSLDACVDPNEPE---FNTLVRIMATRCMLAAEYFCSGSVTKE 828
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
+ +GHY LA +YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 829 S-YGHYGLASKIYTHFTSPIRRYADVLAHRQLAAAIGYSPLH 869
>gi|46108604|ref|XP_381360.1| hypothetical protein FG01184.1 [Gibberella zeae PH-1]
Length = 983
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 185/528 (35%), Positives = 259/528 (49%), Gaps = 59/528 (11%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT +VV +++R+ R+ VG ++ + RK ++ + L P
Sbjct: 374 QPTAKVVGVVKRNWRQ--YVGHIDPSSASKASSQGRK-------------QDSVFLIPMD 418
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
K PK+ + + + D + KRL LV ID W +S P H + G
Sbjct: 419 KKIPKIRLRSRQVADLLGKRL----------LVT--IDGWERDSRHPIGHFVRSLGELET 466
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEE----LLSRKDLRNFCIFTID 288
+ A+L E + F L CLP W VP R+DLR I +ID
Sbjct: 467 KSAETEALLLEWDVQYRPFPKTVLDCLPKEGHDWRVPTSMDDPGWRQREDLRGLLICSID 526
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P D+DDAL ++L +G VGVHIADVS FV P A+D EA +R T+VY++ ++I M
Sbjct: 527 PVGCQDIDDALHAKQLPNGNYEVGVHIADVSNFVKPANAMDTEASIRGTTVYLVDKRIDM 586
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP LL ++ SL P V+R AFS+ W+LN D+V+ ++VI+S SYE AQ ID
Sbjct: 587 LPPLLGTDLCSLKPYVERFAFSVLWELNDNADIVNVRFTKSVIKSREAFSYEQAQLRID- 645
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVF 467
+ D+ + ++ L +SK LK KR GAL L + + V
Sbjct: 646 ------------------DDSQQDDLTKGMRMLLMLSKKLKKKRMEAGALSLSSPEVKVQ 687
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
E P D D N L EEFML AN + A I AFP +A+LRRH AP
Sbjct: 688 TESETSDPIDVKTKQLLDTNSLVEEFMLFANISVAAKIYEAFPQTAILRRHGAPPKTNFD 747
Query: 528 EF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCS 585
E +K G++L T SS SL+Q + F+ L+ ATR M A YFCS
Sbjct: 748 ELSNQLRTKRGMELRTDSSKALADSLDQC---VDSKEPFFNTLVRIMATRCMMSAEYFCS 804
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
G + ++ HY LA +YTHFTSP+RRY DL+ HR L AA++ E ++
Sbjct: 805 GT-QAYPEFRHYGLASEIYTHFTSPIRRYADLLAHRQLAAAIDYEAIH 851
>gi|258647303|ref|ZP_05734772.1| ribonuclease R [Prevotella tannerae ATCC 51259]
gi|260852821|gb|EEX72690.1| ribonuclease R [Prevotella tannerae ATCC 51259]
Length = 761
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 194/596 (32%), Positives = 284/596 (47%), Gaps = 81/596 (13%)
Query: 49 KGIHHDDDSSSEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMI 108
KG +H +A Q ++E NG++ D ++K + + ++A++ +
Sbjct: 67 KGHYH------KAQRQHIMEGVFKRKRNGYNSFIPDGSDKPILVSERNALHALDGDRVQV 120
Query: 109 SSYPTKRPTGR---VVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDR 165
+ +R R V++I+ERS D VG L V +KN + L P R
Sbjct: 121 AMMARRRGHEREAEVIAILERS--NDTFVGRLKV--------------EKNYAFLITPSR 164
Query: 166 EYIQLTPTHPKYPKMVVLVKDL--PDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQA 223
VL D+ P K + GD V +I EW E+ P
Sbjct: 165 ----------------VLANDIFIPTQNLKGGKTGDK------VVVKIVEWPMEAKSPIG 202
Query: 224 HVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFC 283
V+ + G+ GE ++NAIL E + + + +P V EE+ R+D+R+
Sbjct: 203 KVVDILGQEGENNAEMNAILAEFNLPYT-YPNRVTEAADKIPDGVTAEEIAQREDMRDVL 261
Query: 284 IFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQ 343
FTIDP A D DDALSI L+DG VGVHIADV+ +V G +D EA R+TS+Y++
Sbjct: 262 TFTIDPRDAKDFDDALSIRTLADGAWEVGVHIADVTAYVHEGDIIDREALKRATSIYLVD 321
Query: 344 RKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQ 403
R IPMLP LS ++ SL D+LA+S+ + +N AG+V+D + TVIRS + YE Q
Sbjct: 322 RTIPMLPERLSNQLCSLRQDEDKLAYSVIFKMNDAGEVLDWHLAHTVIRSDRRFVYEEVQ 381
Query: 404 DIID--GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
I++ G+ E T GE + G + + +L ++K L+ KRF GA+ +
Sbjct: 382 YILEQNGEASAEDLATPGEHPKVVKGTTPVGEYAAQLITLNRLAKQLRSKRFKHGAIGFD 441
Query: 462 NSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI--------ARAFPDSA 513
+ F D+ G P + + +D N L EEFMLLAN+T AE I A+ FP
Sbjct: 442 RPEIRFEIDDKGHPVSTFIRLAKDANKLVEEFMLLANRTVAEHIGRVARGKKAKVFP--- 498
Query: 514 LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQ-----FHQSLEQAREKLKDDYVLFDI 568
R H P+ KL F +K G ++ T S + ++ LE + K + V
Sbjct: 499 -YRIHDVPDPEKLITLSGFIAKFGYKIRTEGSKKDVSKSLNRLLEDVKGKKEQGMVEMVT 557
Query: 569 LINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 624
L R M A Y + GHY L F YTHFTSP+RRYPD++VHR L
Sbjct: 558 L-----RAMAKARYSIE-------NIGHYGLMFDYYTHFTSPIRRYPDMMVHRLLT 601
>gi|349581145|dbj|GAA26303.1| K7_Dis3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296310|gb|EIW07412.1| Dis3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1001
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 259/497 (52%), Gaps = 50/497 (10%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
++++ K LP ++ R ++ +V + ID W +P H + G + +
Sbjct: 424 VILMDKCLP-KVRIRTRRAAELLDKRIVIS-IDSWPTTHKYPLGHFVRDLGTIESAQAET 481
Query: 240 NAILYENAICCSGFSPESLSCLPCV------------PWEVPQEELLS-RKDLRNFCIFT 286
A+L E+ + FS + L CLP P V ++ LL+ RKDLR+ I +
Sbjct: 482 EALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPLLTKRKDLRDKLICS 541
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E R TSVY++ ++I
Sbjct: 542 IDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEGAARGTSVYLVDKRI 601
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIRS SYE AQ I
Sbjct: 602 DMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSYEQAQLRI 661
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-P 465
D K ++ L G +++L ++S LK KR GAL L + +
Sbjct: 662 DDK---TQNDELTMG----------------MRALLKLSVKLKQKRLEAGALNLASPEVK 702
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP---N 522
V + E P + + N L EEFMLLAN + A I AFP +A+LRRH AP N
Sbjct: 703 VHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAAPPSTN 762
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
L E ++ + + SS SL++ + +D Y F+ L+ +TR M A
Sbjct: 763 FEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNTLVRIMSTRCMMAAQ 817
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR---- 637
YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 818 YFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNK 876
Query: 638 -RMLPKNNHREGVRGRF 653
M+ +N +R+ +F
Sbjct: 877 MDMICRNINRKHRNAQF 893
>gi|6324552|ref|NP_014621.1| Dis3p [Saccharomyces cerevisiae S288c]
gi|2500547|sp|Q08162.1|RRP44_YEAST RecName: Full=Exosome complex exonuclease DIS3; AltName:
Full=Chromosome disjunction protein 3; AltName:
Full=Ribosomal RNA-processing protein 44
gi|1419801|emb|CAA99021.1| DIS3 [Saccharomyces cerevisiae]
gi|1754617|dbj|BAA11176.1| DIS3 protein [Saccharomyces cerevisiae]
gi|256269970|gb|EEU05222.1| Dis3p [Saccharomyces cerevisiae JAY291]
gi|285814867|tpg|DAA10760.1| TPA: Dis3p [Saccharomyces cerevisiae S288c]
Length = 1001
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 259/497 (52%), Gaps = 50/497 (10%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
++++ K LP ++ R ++ +V + ID W +P H + G + +
Sbjct: 424 VILMDKCLP-KVRIRTRRAAELLDKRIVIS-IDSWPTTHKYPLGHFVRDLGTIESAQAET 481
Query: 240 NAILYENAICCSGFSPESLSCLPCV------------PWEVPQEELLS-RKDLRNFCIFT 286
A+L E+ + FS + L CLP P V ++ LL+ RKDLR+ I +
Sbjct: 482 EALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPLLTKRKDLRDKLICS 541
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E R TSVY++ ++I
Sbjct: 542 IDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEGAARGTSVYLVDKRI 601
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIRS SYE AQ I
Sbjct: 602 DMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSYEQAQLRI 661
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-P 465
D K ++ L G +++L ++S LK KR GAL L + +
Sbjct: 662 DDK---TQNDELTMG----------------MRALLKLSVKLKQKRLEAGALNLASPEVK 702
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP---N 522
V + E P + + N L EEFMLLAN + A I AFP +A+LRRH AP N
Sbjct: 703 VHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAAPPSTN 762
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
L E ++ + + SS SL++ + +D Y F+ L+ +TR M A
Sbjct: 763 FEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNTLVRIMSTRCMMAAQ 817
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR---- 637
YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 818 YFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNK 876
Query: 638 -RMLPKNNHREGVRGRF 653
M+ +N +R+ +F
Sbjct: 877 MDMICRNINRKHRNAQF 893
>gi|151945609|gb|EDN63850.1| 3'-5'-exoribonuclease complex subunit [Saccharomyces cerevisiae
YJM789]
Length = 1001
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 259/497 (52%), Gaps = 50/497 (10%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
++++ K LP ++ R ++ +V + ID W +P H + G + +
Sbjct: 424 VILMDKCLP-KVRIRTRRAAELLDKRIVIS-IDSWPTTHKYPLGHFVRDLGTIESAQAET 481
Query: 240 NAILYENAICCSGFSPESLSCLPCV------------PWEVPQEELLS-RKDLRNFCIFT 286
A+L E+ + FS + L CLP P V ++ LL+ RKDLR+ I +
Sbjct: 482 EALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPLLTKRKDLRDKLICS 541
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E R TSVY++ ++I
Sbjct: 542 IDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEGAARGTSVYLVDKRI 601
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIRS SYE AQ I
Sbjct: 602 DMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSYEQAQLRI 661
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-P 465
D K ++ L G +++L ++S LK KR GAL L + +
Sbjct: 662 DDK---TQNDELTMG----------------MRALLKLSVKLKQKRLEAGALNLASPEVK 702
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP---N 522
V + E P + + N L EEFMLLAN + A I AFP +A+LRRH AP N
Sbjct: 703 VHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAAPPSTN 762
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
L E ++ + + SS SL++ + +D Y F+ L+ +TR M A
Sbjct: 763 FEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNTLVRIMSTRCMMAAQ 817
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR---- 637
YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 818 YFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNK 876
Query: 638 -RMLPKNNHREGVRGRF 653
M+ +N +R+ +F
Sbjct: 877 MDMICRNINRKHRNAQF 893
>gi|190407321|gb|EDV10588.1| 3'-5' exoribonuclease complex subunit [Saccharomyces cerevisiae
RM11-1a]
gi|323335686|gb|EGA76969.1| Dis3p [Saccharomyces cerevisiae Vin13]
Length = 1001
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/497 (35%), Positives = 259/497 (52%), Gaps = 50/497 (10%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
++++ K LP ++ R ++ +V + ID W +P H + G + +
Sbjct: 424 VILMDKCLP-KVRIRTRRAAELLDKRIVIS-IDSWPTTHKYPLGHFVRDLGTIESAQAET 481
Query: 240 NAILYENAICCSGFSPESLSCLPCV------------PWEVPQEELLS-RKDLRNFCIFT 286
A+L E+ + FS + L CLP P V ++ LL+ RKDLR+ I +
Sbjct: 482 EALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPLLTKRKDLRDKLICS 541
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E R TSVY++ ++I
Sbjct: 542 IDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEGAARGTSVYLVDKRI 601
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIRS SYE AQ I
Sbjct: 602 DMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSYEQAQLRI 661
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-P 465
D K ++ L G +++L ++S LK KR GAL L + +
Sbjct: 662 DDK---TQNDELTMG----------------MRALLKLSVKLKQKRLEAGALNLASPEVK 702
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP---N 522
V + E P + + N L EEFMLLAN + A I AFP +A+LRRH AP N
Sbjct: 703 VHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAAPPSTN 762
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
L E ++ + + SS SL++ + +D Y F+ L+ +TR M A
Sbjct: 763 FEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNTLVRIMSTRCMMAAQ 817
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR---- 637
YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 818 YFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNK 876
Query: 638 -RMLPKNNHREGVRGRF 653
M+ +N +R+ +F
Sbjct: 877 MDMICRNINRKHRNAQF 893
>gi|189464648|ref|ZP_03013433.1| hypothetical protein BACINT_00991 [Bacteroides intestinalis DSM
17393]
gi|189436922|gb|EDV05907.1| ribonuclease R [Bacteroides intestinalis DSM 17393]
Length = 714
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/432 (35%), Positives = 226/432 (52%), Gaps = 53/432 (12%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G+ G+ +++AIL E + P S+ +P E+
Sbjct: 194 KVVEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPSSVEKAADRIPAEI 251
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D RN FTIDP A D DDALSI ++ DG+ VGVHIADV+++V G+ +
Sbjct: 252 SAEEIAKREDFRNVTTFTIDPKDAKDFDDALSIRKIKDGLWEVGVHIADVTHYVTEGSII 311
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S+ +++N GDV D +
Sbjct: 312 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFEINEKGDVKDSRVVH 371
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI+S + +YE AQ +I+ K EG D I L ++K L
Sbjct: 372 TVIKSDRRFTYEEAQQVIETK----------EG-----------DFKEEILMLDTIAKAL 410
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI--- 505
+ KRF GA+ + + F D G P +D N L EEFMLLAN+T AE I
Sbjct: 411 RQKRFVSGAINFDRYEVKFEIDAKGKPISVYFKVSQDANKLVEEFMLLANRTVAEKIGRV 470
Query: 506 -----ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQA 555
A+ FP R H P+ KL F ++ G +L TS S + L+
Sbjct: 471 PKNKKAKVFP----YRIHDLPDPEKLDNLAQFIARFGYKLRTSGTKTDVSKSINHLLDDI 526
Query: 556 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
+ K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+P
Sbjct: 527 QGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFP 574
Query: 616 DLVVHRTLNAAL 627
D++VHR L L
Sbjct: 575 DMMVHRLLTKYL 586
>gi|281203121|gb|EFA77322.1| Putative mitotic control protein [Polysphondylium pallidum PN500]
Length = 1275
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 172/550 (31%), Positives = 268/550 (48%), Gaps = 55/550 (10%)
Query: 93 QQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKD 152
QQ G A + K TG+VV I +R+ W +Y K
Sbjct: 399 QQTAGQTAGQTTGKTTGDNGNKLITGKVVGIFQRN--------------WRDYVATIEKG 444
Query: 153 AKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARID 212
A SV Y+ + P + P + V ++ + + KRL R+D
Sbjct: 445 A-------SVAS-NYVMVVPLDKRIPLIHVPTRNAVNYVGKRL------------VVRLD 484
Query: 213 EWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE 272
W S P H++ G G++E ++ +++ E+ + ++P+ L LP W+VP E
Sbjct: 485 RWELGSSHPSGHIVKALGTTGDLETELLSLINEHEVALPKWTPQLLEGLPSPGWKVPDAE 544
Query: 273 LLSRKDL-RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 331
R+ + + +IDP + D+DDA+S+ L++ +GVHIADVS+FVL GT LD E
Sbjct: 545 RKYRRSIVTSHRTMSIDPLGSKDIDDAISLGYLANNRIEIGVHIADVSFFVLDGTKLDEE 604
Query: 332 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTV 390
A R T++Y+ R+ MLP +LSE+V SL G +R A S+ W +N ++ W GRT+
Sbjct: 605 AARRGTTLYLPDRRFDMLPAILSEDVCSLVGGQERCAMSVIWTVNLNNMTIESTWFGRTI 664
Query: 391 IRSCCKLSYEHAQDIIDGKF-------DVESSNTLGEGWP-QLYGQFEWSDVVRSIKSLY 442
I S +L Y+ AQDIIDG+ D + L G+ ++Y + ++ + L
Sbjct: 665 IFSSAELHYQLAQDIIDGRVKQGMDKDDDVTGGGLNAGYKRRVYNDTKIEELRNDLLVLR 724
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDE--YGTPYDSVLSGREDLNFLFEEFMLLANKT 500
++++ +R G L LE+ + F F++ P VL +++ L E+M+LAN +
Sbjct: 725 NFYRVMRKQREMSGGLDLESIEVRFKFNQNDKTQPDKIVLKNDLEVHSLVAEYMILANAS 784
Query: 501 AAEVIARAFPDSALLRRHPAPN---MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 557
I +P ALLRRHP PN + LRE C G +L+T ++ SL A +
Sbjct: 785 VGTKIHSHYPGGALLRRHPKPNQLGFQSLRELFDLC---GFKLETDTNKDLASSLNNAVD 841
Query: 558 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
DD I+ + A YF +G + ++ HY LA YTHFTSP+RRY D+
Sbjct: 842 --GDDPFTNTIIRLKTVNILSEAIYFSTGSL-NVIEYYHYGLALEKYTHFTSPIRRYADI 898
Query: 618 VVHRTLNAAL 627
+VHR L A+
Sbjct: 899 IVHRQLWDAI 908
>gi|332300072|ref|YP_004441993.1| ribonuclease R [Porphyromonas asaccharolytica DSM 20707]
gi|332177135|gb|AEE12825.1| ribonuclease R [Porphyromonas asaccharolytica DSM 20707]
Length = 725
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/433 (37%), Positives = 228/433 (52%), Gaps = 54/433 (12%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V I EW P VL V G+ G+ + ++ AIL E I G+ ++ +
Sbjct: 202 VEVAITEWPSSDKIPTGRVLKVLGKAGDNDTEMRAILTEYNIDY-GYPQAAIDEAEQLSG 260
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
E+ QE+L R+D R TIDP+ A D DDALS L DG VGVHIADVSYFV G+
Sbjct: 261 EITQEQLAQREDFREVPTLTIDPADAKDFDDALSYRDLGDGRHEVGVHIADVSYFVTEGS 320
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
+D EA R TSVY++ R IPMLP L + SL P D+ A+S L++A V I
Sbjct: 321 KIDEEAYARGTSVYLVDRTIPMLPEALCNNLCSLRPNEDKYAYSCILTLDNAAHVQQYRI 380
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
RTVIRS +++YE AQD+I+G+ D + + I+ L+E+S+
Sbjct: 381 CRTVIRSDQRMTYEEAQDVIEGRSDTQQA---------------------IIQPLFELSQ 419
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL-----NFLFEEFMLLANKTA 501
L+ +RF +GA++ ++ + F+ D G P +G E++ + L EEFMLLAN+T
Sbjct: 420 QLRKRRFDEGAIKFQSQEVRFVLDPKGRP-----TGVEEVIDNESHHLIEEFMLLANRTV 474
Query: 502 AEVIA--RAFPDSA---LLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQS 551
AE I RA A + R H P+ KL +F K G +++ S S F++
Sbjct: 475 AEDIGLVRAKGKKAKNFVYRVHAQPSEEKLMALASFAGKFGYKVNLSGENRQVSRSFNKL 534
Query: 552 LEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 611
L+ + K ++ ++ A R M A Y S D + GHY L+F YTHFTSP+
Sbjct: 535 LDSVQGKREE-----SLIETLAIRSMTRAEY--SPD-----NIGHYGLSFAYYTHFTSPI 582
Query: 612 RRYPDLVVHRTLN 624
RRYPDL+VHR L
Sbjct: 583 RRYPDLMVHRLLT 595
>gi|320169157|gb|EFW46056.1| DIS3-like exonuclease 1 [Capsaspora owczarzaki ATCC 30864]
Length = 1145
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 176/569 (30%), Positives = 273/569 (47%), Gaps = 69/569 (12%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKD---AKKNRSSLSV--PDREYIQL 170
PTGRVV+I++R QW +Y +D A+ +SL+ + +
Sbjct: 496 PTGRVVAIVQR--------------QWRDYVCTIVRDSAAAQSTSTSLASTGANVSRVLC 541
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
P + PK+ + + +E + + RID W S +P H+++ G
Sbjct: 542 VPMDSRIPKIRIATRQA------------VQLEGQRLVVRIDRWEYNSQYPTGHLVNSLG 589
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPC----VPWEVPQEELLSRKDLRNFCIFT 286
++ + AIL E+ I + S L LP PW++P ++ R+D+R+ + +
Sbjct: 590 PIENLDTETAAILVEHDIVLNPPSERQLQELPVHTPESPWQLPPDQAARRRDIRDSLVMS 649
Query: 287 IDPSTATDLDDALSIERLSDGISR-------------------------VGVHIADVSYF 321
IDP + D+DDALS+ RL+ + +GVHIADVSYF
Sbjct: 650 IDPLGSKDVDDALSVRRLTPAEQQYQTRHLAKKRQAAKEAPLSTAPTYELGVHIADVSYF 709
Query: 322 VLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV 381
V + D+EA+ RST++Y+ R+ MLP +LSE++ SL DR A S+ W L+ D+
Sbjct: 710 VKENSLTDVEARARSTTIYLADRRFDMLPAVLSEQLCSLLSCEDRCAMSVIWILDENYDM 769
Query: 382 VDRWIGRTVIRSCCKLSYEHAQDI-IDGKFDVESSNTLGE-----GWPQLYGQFEWSDVV 435
+D W GRT++RS +L YE AQDI K D E + + E + + +
Sbjct: 770 LDVWYGRTLLRSSFQLYYELAQDIATHAKPDPELAELVRELRTDKSLTAAAKLAKIALMR 829
Query: 436 RSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFML 495
+I+ L +V++ + R +GAL LE ++ F FDE T D V +++ E M+
Sbjct: 830 EAIQLLMQVARKFRADRIANGALELEGTEIRFKFDENHTITDVVPKRELEIHKTVAEAMI 889
Query: 496 LANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQA 555
LAN A IA FP ALLR H P+ L A + G +D +S+ SL+
Sbjct: 890 LANHYVARQIATVFPTHALLRHHTLPSKSNLDRLVAVATACGFSMDVTSNKTIADSLDAC 949
Query: 556 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
+ D + ++ AT+ M A+Y +G ++ HY LA YTHFTSP+RRY
Sbjct: 950 --VVPGDPSVNKMIRTLATQAMSEAAYVSTG-MVQPSELYHYGLALDYYTHFTSPIRRYA 1006
Query: 616 DLVVHRTLNAALEAEKLYWKHRRMLPKNN 644
D+ VHR L A+L A+ + +ML N
Sbjct: 1007 DVYVHRQLMASLAADNPQREEYQMLSNPN 1035
>gi|193652752|ref|XP_001942877.1| PREDICTED: DIS3-like exonuclease 2-like [Acyrthosiphon pisum]
Length = 820
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 169/463 (36%), Positives = 246/463 (53%), Gaps = 23/463 (4%)
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE-MELVAARIDEW-NEESPFPQAH 224
Y L P + P+++V P I+ R D T E EL A W N ++PF
Sbjct: 226 YSTLIPRDCRIPRLLVDTSIWPFPIELR----DGTKESKELFYAVFSRWDNYKTPF--GV 279
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCI 284
+ V G G++ + IL + I + PE++ P+ V +EEL RKD R CI
Sbjct: 280 LKGVLGESGKINAETEGILIAHDIQEHPY-PENIDKYFPPPFSV-EEELKHRKDFRKNCI 337
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
F+IDP TA DLDDALS L +G +G+HI+DVSYFV GT LD A+ +TSVY++Q+
Sbjct: 338 FSIDPPTAKDLDDALSCVPLPNGNFEIGIHISDVSYFVKQGTPLDEIAEKLATSVYLIQK 397
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
MLP L+ + SL PG D+LA SI ++ V+ +++I SC +L Y HAQ
Sbjct: 398 VYHMLPPALT-MMASLLPGTDKLAVSITLEMTPDASVISHSFSQSIIHSCAQLHYAHAQI 456
Query: 405 IIDG--KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
++ K D + S +P +Y + SD ++ L++++ +++++RF GAL +
Sbjct: 457 FLENPDKKDWDESE-----FPTVYNGYTVSDCATAVSHLHKLAALMRERRFGSGALAINQ 511
Query: 463 SKPVFLFDEYGT-PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
K F D P L + N+L EEFMLLAN AE + FP +A+LR H AP
Sbjct: 512 PKLSFEIDRATCEPLSYSLYILHESNWLIEEFMLLANTMVAEHLKTHFPTTAMLRNHHAP 571
Query: 522 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILI-NYATRPMQLA 580
++ + + H + +D +S+G H+S + +DI+I N ++PM A
Sbjct: 572 DVAPMEKVVKLLKTHDIDIDFTSAGSIHKSKAVYCQGENSKNSHWDIIINNILSKPMVRA 631
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
Y C D D H+AL P YTHFTSP+RRYPD+VVHR L
Sbjct: 632 EY-CVID--PDRIMSHFALNVPYYTHFTSPIRRYPDIVVHRML 671
>gi|163786944|ref|ZP_02181392.1| putative exoribonuclease [Flavobacteriales bacterium ALC-1]
gi|163789222|ref|ZP_02183664.1| putative exoribonuclease [Flavobacteriales bacterium ALC-1]
gi|159875437|gb|EDP69499.1| putative exoribonuclease [Flavobacteriales bacterium ALC-1]
gi|159878804|gb|EDP72860.1| putative exoribonuclease [Flavobacteriales bacterium ALC-1]
Length = 732
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 157/461 (34%), Positives = 239/461 (51%), Gaps = 36/461 (7%)
Query: 181 VVLVKDL--PDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQ 238
V + KD+ P + K+ E+GD V +++W E++ P V+ V G+ GE +
Sbjct: 170 VKMYKDIFVPINKIKKAEDGDK------VLVSLEDWPEKADSPYGKVIEVLGKPGEHNTE 223
Query: 239 INAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDA 298
IN+I+ E + F + + + + EE+ R+D+R FTIDP A D DDA
Sbjct: 224 INSIMAEYGLPLE-FPHDVETYANNLDISIKPEEIAKRRDMRKDLTFTIDPKDAKDFDDA 282
Query: 299 LSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVG 358
LS L +G+ VG+HIADVS++V PGT LD EA R+TS+Y++ R +PMLP LS
Sbjct: 283 LSFTVLENGLYEVGIHIADVSHYVQPGTVLDDEAYERATSIYLVDRVVPMLPERLSNGAC 342
Query: 359 SLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTL 418
SL P ++ FS + +N+ ++ + W GRTV S + +YE AQ +I+ K +N +
Sbjct: 343 SLRPHEEKYTFSAVFQMNNKCEIKNEWFGRTVTYSDARFAYEEAQAVIESK-----TNEI 397
Query: 419 GEGWPQ---LYGQFEWSD--VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 473
PQ L G+ +D + +I + E++K ++ +R +GA+ + + F D+
Sbjct: 398 ----PQDVSLTGKTYKTDQAIADAILKMDELAKKMRSQRMREGAISFDKVEVKFNLDDQA 453
Query: 474 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR-HPAPNMRKLREFEAF 532
P +D N L EEFMLLAN+ +E I + P + R H P+ KL + +
Sbjct: 454 NPVGVFFKTSKDANKLIEEFMLLANRKVSEFIGKQNPKKTFVYRVHDEPDESKLAQLQTV 513
Query: 533 CSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKD 590
S+ G +L+ G SL + + K + L D L R M A Y
Sbjct: 514 VSRFGHKLNFRDKGSIASSLNNLLKDVVGKKEQNLVDTL---TIRTMSKAEYTTH----- 565
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
+ GHY LAF Y+HFTSP+RRYPD++ HR L L+ EK
Sbjct: 566 --NIGHYGLAFNYYSHFTSPIRRYPDVMAHRLLQQYLDGEK 604
>gi|423230707|ref|ZP_17217111.1| ribonuclease R [Bacteroides dorei CL02T00C15]
gi|423244418|ref|ZP_17225493.1| ribonuclease R [Bacteroides dorei CL02T12C06]
gi|392630357|gb|EIY24350.1| ribonuclease R [Bacteroides dorei CL02T00C15]
gi|392641992|gb|EIY35764.1| ribonuclease R [Bacteroides dorei CL02T12C06]
Length = 715
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 178/567 (31%), Positives = 272/567 (47%), Gaps = 85/567 (14%)
Query: 73 NYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDG 132
N N P T ++ MN + A+ + + P G V+ I+ER+ D
Sbjct: 93 NGKNSFIPDDGGETIFIAERNSAHAMNNDKVKIALFAKRKNRNPEGEVIEILERA--NDT 150
Query: 133 IVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDL--PDS 190
VG L V +++ + L +R L D+ P
Sbjct: 151 FVGTLKVEKFYAF--------------LLTENR----------------TLANDIFIPKD 180
Query: 191 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 250
K + GD + +I EW EE+ P V+ + G+ GE +++AIL E +
Sbjct: 181 KLKGGKNGDKAV------VKIVEWPEEAKNPIGQVIDILGKAGENTTEMHAILAEFGLPY 234
Query: 251 SGFSPESL-SCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 309
P+++ + +P E+ + + R+D RN FTIDP A D DDALSI + G+
Sbjct: 235 --VYPKNVETAAEKIPAEISEADYAEREDFRNVTTFTIDPKDAKDFDDALSIRLIKPGLW 292
Query: 310 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 369
VGVHIADV+++V G+ +D EA+ R+TSVY++ R IPMLP L + SL P ++LAF
Sbjct: 293 EVGVHIADVTHYVKEGSVIDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAF 352
Query: 370 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 429
S+ +++N G+V D I T+I+S + +YE AQ +I+ GEG
Sbjct: 353 SVIFNMNEKGEVKDSRIVHTIIKSDRRFTYEEAQKVIE----------TGEG-------- 394
Query: 430 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFL 489
D I L ++++IL+ +R GA+ + + F DE G P ++ N L
Sbjct: 395 ---DYKEEILELNKLTQILRKQRLAAGAIDFDRIEVKFEIDETGKPLSVYFKESKEANKL 451
Query: 490 FEEFMLLANKTAAEVI--------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD 541
EEFMLLAN+T AE I A+ FP R H P+ KL F ++ G ++
Sbjct: 452 IEEFMLLANRTVAERIGKVPKNKKAKVFP----YRIHDLPDPDKLENLNWFINRFGYKIR 507
Query: 542 TS-SSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALA 600
TS S + +S+ + + +K+ +++ + R MQ A Y + GHY LA
Sbjct: 508 TSGSKTEISKSINRLLDDIKNKKEQ-NLVETVSLRAMQKARYSTH-------NIGHYGLA 559
Query: 601 FPVYTHFTSPLRRYPDLVVHRTLNAAL 627
F YTHFTSP+RR+PD++VHR L L
Sbjct: 560 FDYYTHFTSPIRRFPDMMVHRLLTRYL 586
>gi|329956491|ref|ZP_08297088.1| ribonuclease R [Bacteroides clarus YIT 12056]
gi|328524388|gb|EGF51458.1| ribonuclease R [Bacteroides clarus YIT 12056]
Length = 719
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/429 (36%), Positives = 224/429 (52%), Gaps = 45/429 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G+ G+ +++AIL E + P S+ +P E+
Sbjct: 198 KVVEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPASVEKAADKIPAEI 255
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
P EE R+D RN FTIDP A D DDALS+ +L D + VGVHIADV+++V G +
Sbjct: 256 PAEEYAKREDFRNITTFTIDPKDAKDFDDALSVRKLKDNLWEVGVHIADVTHYVTEGGII 315
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S +++ G+V + I
Sbjct: 316 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSAIFEMTDKGEVKNSRIVH 375
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI+S + +YE AQ II+ K EG D I L ++KIL
Sbjct: 376 TVIKSDRRFTYEEAQQIIETK----------EG-----------DFKEEILKLDSLAKIL 414
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 415 REKRFAAGAINFDRYEVKFEIDEKGKPVSVYFKESKDANKLVEEFMLLANRTVAEKIGRV 474
Query: 509 ----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
P R H P+ KL F ++ G +L TS S + L+ + K
Sbjct: 475 PKNKKPKVFPYRIHDLPDPEKLDNLSQFIARFGYKLRTSGTKTDVSKSINHLLDDIQGKK 534
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RRYPD++V
Sbjct: 535 EE-----NLIETVSIRAMQKARYSVH-------NIGHYGLAFDYYTHFTSPIRRYPDMMV 582
Query: 620 HRTLNAALE 628
HR L L+
Sbjct: 583 HRLLTKYLD 591
>gi|384097159|ref|ZP_09998280.1| ribonuclease R [Imtechella halotolerans K1]
gi|383837127|gb|EID76527.1| ribonuclease R [Imtechella halotolerans K1]
Length = 736
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 156/430 (36%), Positives = 230/430 (53%), Gaps = 19/430 (4%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V I++W E++ P + V G+ G+ + +I+AIL E + S F E +
Sbjct: 190 VIVSINDWPEKADSPYGTITQVLGKPGDHDTEIHAILAEYGLPYS-FPLEVEHYANQLDT 248
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+ ++E+ R+D+R+ FTIDP A D DDALS RL +G +G+HIADVS++V PGT
Sbjct: 249 SITKDEISRRRDMRDVLTFTIDPRDAKDFDDALSFRRLENGNFEIGIHIADVSHYVTPGT 308
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R +PMLP +LS SL P ++ FS ++LN + ++V++W
Sbjct: 309 LLDDEAYNRATSVYLVDRVVPMLPEILSNNACSLRPNEEKYTFSAVFELNGSAELVNKWF 368
Query: 387 GRTVIRSCCKLSYEHAQDIID----GKFDVESSNTLGEGWPQLYGQFEWS-DVVRSIKSL 441
G+TV S + +YE AQ II+ K SS + E + S ++V ++ ++
Sbjct: 369 GKTVTYSDQRFAYEEAQAIIEHYTLNKQSDYSSFLMPENIAITDTSYTVSKEIVEAVMTM 428
Query: 442 YEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTA 501
++K L+ KR GA+ + + F DE P +D N L EEFMLLAN+
Sbjct: 429 DVLAKKLRSKRMQSGAISFDKVEVKFRLDENSNPIGVYFKEAKDANKLIEEFMLLANRKV 488
Query: 502 AEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL-- 559
AE IA+ + + R H P+ KL + + + G L+ S SL ++
Sbjct: 489 AEFIAKQ-EKTFVYRVHDEPDEEKLMQLQGIIGRFGYSLNMRSKQTITSSLNSLLTEVQG 547
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
K + L D L A R M A Y S D + GHY LAF YTHFTSP+RRYPD++V
Sbjct: 548 KKEQNLVDTL---AIRSMSKAIY--STD-----NIGHYGLAFDYYTHFTSPIRRYPDVMV 597
Query: 620 HRTLNAALEA 629
HR L L+
Sbjct: 598 HRLLQQYLDG 607
>gi|212692333|ref|ZP_03300461.1| hypothetical protein BACDOR_01829 [Bacteroides dorei DSM 17855]
gi|237711407|ref|ZP_04541888.1| ribonuclease R [Bacteroides sp. 9_1_42FAA]
gi|265752813|ref|ZP_06088382.1| ribonuclease R [Bacteroides sp. 3_1_33FAA]
gi|345514123|ref|ZP_08793637.1| ribonuclease R [Bacteroides dorei 5_1_36/D4]
gi|423240669|ref|ZP_17221783.1| ribonuclease R [Bacteroides dorei CL03T12C01]
gi|212665210|gb|EEB25782.1| ribonuclease R [Bacteroides dorei DSM 17855]
gi|229435940|gb|EEO46017.1| ribonuclease R [Bacteroides dorei 5_1_36/D4]
gi|229454102|gb|EEO59823.1| ribonuclease R [Bacteroides sp. 9_1_42FAA]
gi|263235999|gb|EEZ21494.1| ribonuclease R [Bacteroides sp. 3_1_33FAA]
gi|392643631|gb|EIY37380.1| ribonuclease R [Bacteroides dorei CL03T12C01]
Length = 715
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 178/567 (31%), Positives = 272/567 (47%), Gaps = 85/567 (14%)
Query: 73 NYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDG 132
N N P T ++ MN + A+ + + P G V+ I+ER+ D
Sbjct: 93 NGKNSFIPDDGGETIFIAERNSAHAMNNDKVKIALFAKRKNRNPEGEVIEILERA--NDT 150
Query: 133 IVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDL--PDS 190
VG L V +++ + L +R L D+ P
Sbjct: 151 FVGTLKVEKFYAF--------------LLTENR----------------TLANDIFIPKD 180
Query: 191 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 250
K + GD + +I EW EE+ P V+ + G+ GE +++AIL E +
Sbjct: 181 KLKGGKNGDKAV------VKIVEWPEEAKNPIGQVIDILGKAGENTTEMHAILAEFGLPY 234
Query: 251 SGFSPESL-SCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 309
P+++ + +P E+ + + R+D RN FTIDP A D DDALSI + G+
Sbjct: 235 --VYPKNVETAAEKIPAEISEADYAEREDFRNVTTFTIDPKDAKDFDDALSIRLIKPGLW 292
Query: 310 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 369
VGVHIADV+++V G+ +D EA+ R+TSVY++ R IPMLP L + SL P ++LAF
Sbjct: 293 EVGVHIADVTHYVKEGSVIDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAF 352
Query: 370 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 429
S+ +++N G+V D I T+I+S + +YE AQ +I+ GEG
Sbjct: 353 SVIFNMNEKGEVKDSRIVHTIIKSDRRFTYEEAQKVIE----------TGEG-------- 394
Query: 430 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFL 489
D I L ++++IL+ +R GA+ + + F DE G P ++ N L
Sbjct: 395 ---DYKEEILELNKLAQILRKQRLAAGAIDFDRIEVKFEIDETGKPLSVYFKESKEANKL 451
Query: 490 FEEFMLLANKTAAEVI--------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD 541
EEFMLLAN+T AE I A+ FP R H P+ KL F ++ G ++
Sbjct: 452 IEEFMLLANRTVAERIGKVPKNKKAKVFP----YRIHDLPDPDKLENLNWFINRFGYKIR 507
Query: 542 TS-SSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALA 600
TS S + +S+ + + +K+ +++ + R MQ A Y + GHY LA
Sbjct: 508 TSGSKTEISKSINRLLDDIKNKKEQ-NLVETVSLRAMQKARYSTH-------NIGHYGLA 559
Query: 601 FPVYTHFTSPLRRYPDLVVHRTLNAAL 627
F YTHFTSP+RR+PD++VHR L L
Sbjct: 560 FDYYTHFTSPIRRFPDMMVHRLLTRYL 586
>gi|358388849|gb|EHK26442.1| hypothetical protein TRIVIDRAFT_167067, partial [Trichoderma virens
Gv29-8]
Length = 986
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 191/559 (34%), Positives = 279/559 (49%), Gaps = 78/559 (13%)
Query: 87 EKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYK 146
E+V +Q+ G N ++ PT +VV +++R+ R+ VG ++ + K
Sbjct: 362 EEVKRTQKASGENQLQ-------------PTAKVVGVVKRNWRQ--YVGHIDPST--ASK 404
Query: 147 G---GSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 203
G G R D+ + L P K PK+ + + + + + KRL
Sbjct: 405 GPSQGRRLDS--------------VFLIPMDKKIPKIRLRTRQVSELLGKRL-------- 442
Query: 204 MELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
LV +D W+ +S P H++ G + A+L E + F L CLP
Sbjct: 443 --LVT--VDSWDRDSRHPVGHLVRSLGELETKAAETEALLLEWDVQYRPFPKTVLDCLPK 498
Query: 264 V--PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 317
W VP+ + R+DLR+ I +IDP D+DDAL L +G VGVHIAD
Sbjct: 499 EGHDWRVPENKEDPGWRDREDLRDLLICSIDPPGCQDIDDALHARLLPNGNYEVGVHIAD 558
Query: 318 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 377
VS+FV P A+D EA +R T+VY++ ++I MLP+LL ++ SL P V+R AF++ W+L+
Sbjct: 559 VSHFVKPANAMDTEASIRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVERFAFTVIWELDE 618
Query: 378 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 437
D+V+ ++VI+S SYE AQ ID + D+ +
Sbjct: 619 NADIVNVRFTKSVIKSREAFSYEQAQLRID-------------------DNSQQDDLTKG 659
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLL 496
++ L +SK LK KR GAL L + + V + E P D D N L EEFML
Sbjct: 660 MRMLLMLSKKLKKKRMDAGALSLSSPEIKVHMESESSDPIDVKTKELLDTNSLVEEFMLF 719
Query: 497 ANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQA 555
AN + A I AFP +A+LRRH AP E + K GL+L T SS SL++
Sbjct: 720 ANVSVAAKIYEAFPQTAILRRHGAPPKTNFDELADQLRIKRGLELRTDSSKALADSLDKC 779
Query: 556 REKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 614
++ KD + F+ L+ ATR M A YFCSG + ++ HY LA +YTHFTSP+RRY
Sbjct: 780 VDE-KDPF--FNTLVRIMATRCMMSAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRY 835
Query: 615 PDLVVHRTLNAALEAEKLY 633
DL+ HR L AA+ E ++
Sbjct: 836 ADLLAHRQLAAAIGYEAVH 854
>gi|374596087|ref|ZP_09669091.1| RNAse R [Gillisia limnaea DSM 15749]
gi|373870726|gb|EHQ02724.1| RNAse R [Gillisia limnaea DSM 15749]
Length = 736
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 168/537 (31%), Positives = 256/537 (47%), Gaps = 54/537 (10%)
Query: 95 NDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAK 154
N +N E + + ++ G VV II+R +R VG L + + F +
Sbjct: 114 NKALNGDEVEIYIYNKRNKRKSEGEVVKIIKR--KRTEFVGILQLKENFGF--------- 162
Query: 155 KNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEW 214
+++ D PKM D+ K L+ D + V ++EW
Sbjct: 163 -----VAIAD-------------PKMST---DIFVQKNKILDAQDG----DKVVVILEEW 197
Query: 215 NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELL 274
E++ P + V G+ GE + ++++IL + + F E + + E+
Sbjct: 198 PEKADSPFGRIKEVLGKPGEHQTEMHSILAQYGLPHE-FPKEIEDFANSIDTTIKDAEIK 256
Query: 275 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 334
R+DLR FTIDP A D DDALS E L +G +G+HIADVS+++LPGT LD EA
Sbjct: 257 KRRDLRETLTFTIDPQDAKDFDDALSFEVLKNGNYNIGIHIADVSHYLLPGTVLDQEAYE 316
Query: 335 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSC 394
R+TS+Y++ R +PMLP +LS SL P ++ FS +++++ G ++D+W GRTV S
Sbjct: 317 RATSIYLVDRVVPMLPEVLSNNACSLRPNEEKYTFSAIFEIDTEGHLIDQWFGRTVTNSD 376
Query: 395 CKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFT 454
+ +YE AQ II + + GE Q G DVV +I ++ +++ ++++R
Sbjct: 377 YRFAYEEAQHII----ETNQAEIPGEISIQESGYRVNDDVVSAITTMNDLAIKMRERRMK 432
Query: 455 DGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSAL 514
GA+ + + F E P + N L EEFMLLANK AE I + P
Sbjct: 433 AGAISFDKVEVKFQLSETNEPVGVYFKTSNEANKLIEEFMLLANKKVAEFIGKQTPKKTF 492
Query: 515 LRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILIN 571
+ R H P+ KL + SK G ++D SL + K + + D L
Sbjct: 493 VYRCHDEPDESKLNSLQTVISKFGYKIDLKDKKSIANSLNTLLSDVQGKKEQNMVDTL-- 550
Query: 572 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
R M A Y + GHY LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 551 -TIRTMSKAYYSTK-------NIGHYGLAFDHYSHFTSPIRRYPDVMTHRLLQEYLD 599
>gi|401840176|gb|EJT43082.1| DIS3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1030
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 173/470 (36%), Positives = 243/470 (51%), Gaps = 48/470 (10%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV-- 264
V ID W +P H + G + + A+L E+ + FS L CLP
Sbjct: 478 VVISIDSWPATHKYPLGHFVRDLGTIESAQAETEALLLEHDVEYRPFSKNVLECLPAEGH 537
Query: 265 PWEVP----------QEELLS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 313
W+ P ++ LL+ RKDLR+ I +IDP D+DDAL +L +G VGV
Sbjct: 538 DWKAPTKLDDMEAIAKDPLLTKRKDLRDKVICSIDPPGCVDIDDALHARKLPNGNWEVGV 597
Query: 314 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 373
HIADV++FV P TALD E R TSVY++ ++I MLP+LL ++ SL P VDR AFS+ W
Sbjct: 598 HIADVTHFVKPSTALDAEGAARGTSVYLVDKRIDMLPMLLGTDLCSLKPYVDRFAFSVMW 657
Query: 374 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 433
+L+ D+V+ ++VI+S SYE AQ ID K + + TLG
Sbjct: 658 ELDDNADIVNVEFMKSVIKSREAFSYEQAQLRIDDK-NQDDELTLG-------------- 702
Query: 434 VVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEE 492
+++L ++S LK KR GAL L + + V + E P + + N L EE
Sbjct: 703 ----MRALLKLSIKLKQKRLEAGALNLASPEVKVHMDSETSDPNEVEIKKLLATNSLVEE 758
Query: 493 FMLLANKTAAEVIARAFPDSALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFH 549
FMLLAN + A I AFP +A+LRRH AP N L E ++ + + SS
Sbjct: 759 FMLLANISVARKIYDAFPQTAMLRRHAAPPSTNFETLNEM--LNTRKNMSISLESSKALA 816
Query: 550 QSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 608
SL++ + +D Y F+ L+ +TR M A YF SG + D+ HY LA +YTHFT
Sbjct: 817 DSLDRCVDS-EDPY--FNTLVRIMSTRCMMAAQYFYSGAYS-YPDFRHYGLAVDIYTHFT 872
Query: 609 SPLRRYPDLVVHRTLNAALEAEKLYWKHR-----RMLPKNNHREGVRGRF 653
SP+RRY D+V HR L A+ E L HR M+ +N +R+ +F
Sbjct: 873 SPIRRYCDVVAHRQLAGAIGYEPLSLAHRDKNKMDMICRNINRKHRNAQF 922
>gi|313886681|ref|ZP_07820391.1| ribonuclease R [Porphyromonas asaccharolytica PR426713P-I]
gi|312923843|gb|EFR34642.1| ribonuclease R [Porphyromonas asaccharolytica PR426713P-I]
Length = 725
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 162/433 (37%), Positives = 228/433 (52%), Gaps = 54/433 (12%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V I EW P VL V G+ G+ + ++ AIL E I G+ ++ +
Sbjct: 202 VEVAITEWPSSDKIPTGRVLKVLGKAGDNDTEMRAILTEYNIDY-GYPQAAIDEAEQLSG 260
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
E+ QE+L R+D R TIDP+ A D DDALS L DG VGVHIADVSYFV G+
Sbjct: 261 EITQEQLAQREDFREVPTLTIDPADAKDFDDALSYRDLGDGRHEVGVHIADVSYFVTEGS 320
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
+D EA R TSVY++ R IPMLP L + SL P D+ A+S L++A V I
Sbjct: 321 KIDEEAYARGTSVYLVDRTIPMLPEALCNNLCSLRPNEDKYAYSCILTLDNAAHVQQYRI 380
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
RTVIRS +++YE AQD+I+G+ D + + I+ L+E+S+
Sbjct: 381 CRTVIRSDQRMTYEEAQDVIEGRSDTQQA---------------------IIQPLFELSQ 419
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL-----NFLFEEFMLLANKTA 501
L+ +RF +GA++ ++ + F+ D G P +G E++ + L EEFMLLAN+T
Sbjct: 420 QLRKRRFDEGAIKFQSQEVRFVLDPKGRP-----TGVEEVIDNESHHLIEEFMLLANRTV 474
Query: 502 AEVIA--RAFPDSA---LLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQS 551
AE I RA A + R H P+ KL +F K G +++ S S F++
Sbjct: 475 AEDIGLVRAKGKKAKNFVYRVHAQPSEEKLMALASFAGKFGYKVNLSGENRQVSRSFNKL 534
Query: 552 LEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 611
L+ + K ++ ++ A R M A Y S D + GHY L+F YTHFTSP+
Sbjct: 535 LDSVQGKREE-----SLIETLAIRSMTRAEY--SPD-----NIGHYGLSFAYYTHFTSPI 582
Query: 612 RRYPDLVVHRTLN 624
RRYPDL+VHR L
Sbjct: 583 RRYPDLMVHRLLT 595
>gi|325087954|gb|EGC41264.1| mitotic control protein dis3 [Ajellomyces capsulatus H88]
Length = 1037
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 276/563 (49%), Gaps = 68/563 (12%)
Query: 84 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 143
D E V S ++ + R + +S +PT RVV I++R+ W
Sbjct: 349 DEKEVVVSEKERRALQEEVRRAHGKTSEGRPQPTARVVGIVKRN--------------WR 394
Query: 144 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 203
Y G K + ++ S ++ + + P + PK+ + + D +R+
Sbjct: 395 QYVGNIDKISTASQVQ-SSRRQQTVFVIPMDKRIPKIRIRTRQAQDLFGQRI-------- 445
Query: 204 MELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLS 259
LV +D WN +S +P H + G +G E E A+L E + F L
Sbjct: 446 --LVT--VDAWNRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPQVVLD 497
Query: 260 CLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 313
CLP W+VPQ RKDLR+ + +IDP D+DDAL L +G VGV
Sbjct: 498 CLPPEGHNWKVPQNMDDPGWRDRKDLRDLLVCSIDPPGCQDIDDALHARPLPNGNFEVGV 557
Query: 314 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 373
HIADVS+FV P T +D EA +R T+VY++ ++I MLP+LL ++ SL P V R AFS W
Sbjct: 558 HIADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVQRYAFSTIW 617
Query: 374 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 433
++ + +VV ++VI S SYE AQ ID K + +
Sbjct: 618 EMTPSAEVVSSICTKSVILSREAFSYEQAQLRIDDKSKTD-------------------E 658
Query: 434 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFE 491
+ S++ L ++SK+LK KR GAL L + + D E P V + D N L E
Sbjct: 659 LTESMRLLLKLSKLLKQKRMDAGALNLASPEVRIETDSELSDPVADVKTKALLDTNSLVE 718
Query: 492 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQFHQ 550
EFML AN T A I ++FP +ALLRRH P E A S K + LD SSS +
Sbjct: 719 EFMLHANTTVASKIFKSFPQTALLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLALAR 778
Query: 551 SLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
SL++ + F+ L+ ATR M A YFC+G ++++ HY LA +YTHFTS
Sbjct: 779 SLDRCVDPANP---FFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASSIYTHFTS 834
Query: 610 PLRRYPDLVVHRTLNAALEAEKL 632
P+RRY DLVVHR L AA+ E L
Sbjct: 835 PIRRYADLVVHRQLAAAIGYEGL 857
>gi|409042780|gb|EKM52263.1| hypothetical protein PHACADRAFT_211534 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1004
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 264/540 (48%), Gaps = 74/540 (13%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNY--KGGSRKDAKKNRSSLSVPDREYIQLT 171
++PTGR+V +I+R+ W +Y S + +SLS ++ + T
Sbjct: 375 RQPTGRIVGVIKRN--------------WRSYVCHIDSSSLTSSHETSLS---QQTVFAT 417
Query: 172 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
P P++ + + P + +++ LV ID W+ S +P+ H + G+
Sbjct: 418 PVSRSLPRIRLRTRQAPALLGQKI----------LVT--IDRWDNTSRYPEGHFVRALGK 465
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE-----ELLSRKDLRNFCI 284
E + ++L E + F L CLP W VP + E R+DLR+ I
Sbjct: 466 VESKEAEQESLLLEFDVPYRPFGKAILDCLPPEGDAWVVPPKSDANPEWRDREDLRDLLI 525
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL L +G GVHIADVS FVLP T +D EA R T+VY++ +
Sbjct: 526 CSIDPPGCQDIDDALHARPLPNGNVEAGVHIADVSRFVLPDTPMDSEAAARGTTVYLVDK 585
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFW-----DLNSAGDVVDRWIGRTVIRSCCKLSY 399
+I MLP LL + SL P V+RLAFS+ W ++ ++V+ ++VI S +Y
Sbjct: 586 RIDMLPALLGTNLCSLRPFVERLAFSVIWVSAAREMTPEAEIVNVRFTKSVIASKQAFTY 645
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
E AQ D D ++ L EG I+ L ++ L+ R GAL
Sbjct: 646 EEAQIRKD---DPTQTDALTEG----------------IRLLNRLAVQLRAGRMAAGALN 686
Query: 460 LENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 517
L + + + E P D + N L EEFMLLAN + A I FP +A+LRR
Sbjct: 687 LASPEVKIHLESAESSDPVDVEQKELRETNSLVEEFMLLANISVARKIQETFPQTAVLRR 746
Query: 518 H---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YA 573
H P N KL++ + GL LD SSSG SL++ + + F+ L+ A
Sbjct: 747 HMPPPRTNFEKLQDV--LKKRRGLALDVSSSGALAASLDKCTDAAEP---AFNTLVRIMA 801
Query: 574 TRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
TR M A YFC+G DT +GHY LA P+YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 802 TRCMLSAEYFCAGSVGRDT-FGHYGLATPIYTHFTSPIRRYADVLAHRQLAAAIGHAPLH 860
>gi|332663653|ref|YP_004446441.1| ribonuclease R [Haliscomenobacter hydrossis DSM 1100]
gi|332332467|gb|AEE49568.1| ribonuclease R [Haliscomenobacter hydrossis DSM 1100]
Length = 728
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 235/461 (50%), Gaps = 38/461 (8%)
Query: 177 YPKMVVLVKDLPDSIKKRLEEGD--ATIEMELVAARIDEWNE-ESPFPQAHVLHVFGRGG 233
YP+ V+V D P S++ ++ + E V +I+ W + P + +V G+ G
Sbjct: 169 YPRYAVVVVDPPSSLEILVDPSKLMGAKDEERVVVKIESWTTGQHRQPMGVLTYVLGKAG 228
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ ++ IL N F PE + + E+P+ E+ R+D+R FTIDP A
Sbjct: 229 THDIEMKGILINNGFNLE-FPPEVIKEAEALGTEIPEVEIAIRRDMRKTPTFTIDPENAR 287
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D DDALS L +G VGVHIADV+++V T LD EA RSTSVY++ R PMLP L
Sbjct: 288 DFDDALSFLYLPNGNLEVGVHIADVTHYVHENTTLDKEALARSTSVYLVDRVCPMLPEKL 347
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S E+ SL P D+L FS + ++ +V+RW G+TVI S + SYE AQ ++D
Sbjct: 348 SNELCSLRPNEDKLTFSAVFTFDAHDKIVERWFGKTVIHSDRRFSYEEAQAVLDS----- 402
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 473
GEG D + +K L ++ L+ +RF GA+ E+ + F D+ G
Sbjct: 403 -----GEG-----------DFAKELKVLNALAHKLRKERFKKGAINFESEEVRFRLDDNG 446
Query: 474 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA-RAFPDSA----LLRRHPAPNMRKLRE 528
P + R+D + L E+FMLLANK A ++ + D A + R H PN K+ E
Sbjct: 447 VPIEVFTKERKDAHMLIEDFMLLANKEVATFVSNKGTQDGAEIPFVYRVHDEPNTDKVEE 506
Query: 529 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF 588
F + G++++ ++ S + L ++ IL A R M A Y S D
Sbjct: 507 LARFARQMGVEMNVTTPKDIANSFNKL-AALAEENEALSILGPIAIRTMAKAEY--SSD- 562
Query: 589 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
+ GHY LAF Y+HFTSP+RRY D++ HR L L+A
Sbjct: 563 ----NIGHYGLAFDFYSHFTSPIRRYSDVLAHRILFDNLKA 599
>gi|255720322|ref|XP_002556441.1| KLTH0H13420p [Lachancea thermotolerans]
gi|238942407|emb|CAR30579.1| KLTH0H13420p [Lachancea thermotolerans CBS 6340]
Length = 986
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 187/541 (34%), Positives = 266/541 (49%), Gaps = 73/541 (13%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVVSI RS W Y G P +Q T
Sbjct: 372 QPTARVVSITRRS--------------WRQYVGQI------------APTSIDLQTGGTQ 405
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ ++++ K LP I+ R + +V A +D W + +P H + G
Sbjct: 406 NAF--VILMDKCLP-KIRIRTRRAKELLNKRIVIA-VDSWPDTYKYPLGHFVRELGEIES 461
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVP----------QEELL-SRKDLRN 281
V+ + A+L E+ + FS + L CLP W+ P ++ LL R+DLR+
Sbjct: 462 VQAETEALLLEHDVEYRPFSKKVLDCLPAEGDDWKAPVDLSSPEAIAKDHLLPKRRDLRD 521
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL ++L +G VGVHIADV++FV T LD E R TSVY+
Sbjct: 522 KLICSIDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKANTPLDAEGASRGTSVYL 581
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ ++I MLP+LL + SL P VDR AFS+ W+L+ ++V+ ++VI+S SYE
Sbjct: 582 VDKRIDMLPMLLGTNLCSLKPYVDRFAFSVLWELDENANIVNVDFTKSVIKSREAFSYEQ 641
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ ID D + L +G +++L ++S LK KR GAL L
Sbjct: 642 AQLRID---DESQKDELTQG----------------MRALLQLSIKLKQKRLDAGALNLA 682
Query: 462 NSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
+ + V + E P + + N L EEFMLLAN + A I AFP +A+LRRH A
Sbjct: 683 SPEVKVHMDSETSDPGEVEIKKLLATNSLVEEFMLLANISVARRIYEAFPQTAMLRRHAA 742
Query: 521 P---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRP 576
P N L E + G+ + SS SL++ + L+D Y F+ L+ +TR
Sbjct: 743 PPATNFETLNEMLQL--RKGMSISLESSKALANSLDRCVD-LEDPY--FNTLVRIMSTRC 797
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
M A YF +G + D+ HY LA +YTHFTSP+RRY D+V HR L AA+ E L H
Sbjct: 798 MMAAQYFYAGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAAAIGYEPLDLNH 856
Query: 637 R 637
R
Sbjct: 857 R 857
>gi|195336253|ref|XP_002034756.1| GM14317 [Drosophila sechellia]
gi|194127849|gb|EDW49892.1| GM14317 [Drosophila sechellia]
Length = 1025
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/413 (36%), Positives = 221/413 (53%), Gaps = 35/413 (8%)
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSP-----ESLSCLPCVPWEVPQEELLSRK 277
A ++ GR G ++ ++ AIL+ N + P + P P + Q++L RK
Sbjct: 507 ADLIQPVGRVGNLDDELKAILFHNGL--RDIKPFEQRFNDIFSQPSPP--ISQDDLHQRK 562
Query: 278 DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRST 337
DLR CIFTIDP TA DLDDA+SIE+L D +GVHI+DVS+F++ LD + RST
Sbjct: 563 DLRKMCIFTIDPMTARDLDDAVSIEKLGDNEYEIGVHISDVSHFLIEDNELDNIVKERST 622
Query: 338 SVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW--IGRTVIRSCC 395
S+Y+ I MLP L SL PG D+ AFS+FW +N G ++ + RTVI SC
Sbjct: 623 SIYLANEVIHMLPQSLCMRC-SLLPGEDKFAFSVFWRMNGEGVMLQKEPEFCRTVINSCS 681
Query: 396 KLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTD 455
+ +YEHAQ IID + + N +P + F D+ + L++++ ++ R +
Sbjct: 682 QFAYEHAQKIIDNPNERFTEN----DFPTILNGFNPDDIRNRVLWLHDIASSIRKTRLDN 737
Query: 456 GALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL 515
GAL + N+K F+ D +SG E L+F + A I +FPD A+L
Sbjct: 738 GALTINNAKLRFVLDP--------ISG-EPLSF----------EAVARFIHESFPDIAVL 778
Query: 516 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 575
R HP P + L+ G +LD SSS +S+ + + + + L +
Sbjct: 779 RNHPPPLTKSLKALREKFLALGFELDYSSSKALQESMVRLCNEAPNPVAMNACLSQLLMK 838
Query: 576 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
PM A+YFCS + D HYAL+ P+YTHFTSP+RRYPD++VHR L A L+
Sbjct: 839 PMARATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDIMVHRLLAAGLK 891
>gi|373109324|ref|ZP_09523603.1| ribonuclease R [Myroides odoratimimus CCUG 10230]
gi|371645322|gb|EHO10848.1| ribonuclease R [Myroides odoratimimus CCUG 10230]
Length = 725
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 258/517 (49%), Gaps = 54/517 (10%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
K+P G VV I+ER ++ VG + + + F + S DAK
Sbjct: 131 KKPEGEVVEILERHKKQ--FVGVIEIQKNFAF--VSTADAKM------------------ 168
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
Y + V P +GD +V I++W E++ P V+ V G+ G
Sbjct: 169 ---YTDIFV-----PKEKVGEARDGD------VVVVEIEDWPEKADSPFGKVMKVLGKQG 214
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
E +I+AIL E + F E + + +EE+ R+D+R+ FTIDP A
Sbjct: 215 EHNTEIHAILAEYGLTAE-FPKEVDEYANHLDTSITEEEIAKRRDMRDILTFTIDPKDAK 273
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D DDALS +L +G +G+HIADVS++V GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 274 DFDDALSFRQLENGFYEIGIHIADVSHYVKEGTILDEEAYNRATSVYLVDRTVPMLPEVL 333
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S SL P D+ FS ++L+ ++ ++W GRTV S +++YE AQ IID K V
Sbjct: 334 SNFACSLRPNEDKYTFSAVFELDDKAEIRNKWFGRTVTHSDQRMAYEEAQYIIDSKDRVI 393
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 473
++ G Q + +V ++ L E++ I++ R +DGA+ + + F +E
Sbjct: 394 PADISLTGEDQEVSE----EVADAVLKLNELAMIMRKNRMSDGAISFDKVEVKFNLNEAA 449
Query: 474 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 533
P ++ N L EEFMLLAN+ +E I + + + R H P+ KL +
Sbjct: 450 EPVGVFFKQSKEANHLIEEFMLLANRKVSEFIGKQ-KKTFVYRIHDEPDQEKLFGLQTVI 508
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
++ G ++ S +S+ + + + K + L D L A R M ASY +
Sbjct: 509 ARFGHNINFKSKSSISKSINKLLKDVEGKKEQNLVDTL---AIRCMSKASYSTN------ 559
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
+ GHY LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 560 -NIGHYGLAFDYYSHFTSPIRRYPDVMAHRLLQHYLD 595
>gi|354604032|ref|ZP_09022025.1| ribonuclease R [Alistipes indistinctus YIT 12060]
gi|353348464|gb|EHB92736.1| ribonuclease R [Alistipes indistinctus YIT 12060]
Length = 737
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 164/519 (31%), Positives = 256/519 (49%), Gaps = 81/519 (15%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
P G V+ I+E S ++ VG L ++ F + + D++K + + +P R+
Sbjct: 141 PEGEVIEILEHSDKK--YVGVLELSDSFAF---VKVDSRKFPTDVFIPLRD--------- 186
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+K D K V R+ EW + P ++ V G G+
Sbjct: 187 --------LKGAKDGQK--------------VLVRVTEWPDTMKNPAGEIVDVLGTPGDN 224
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
+++AIL E + + + E +P E+ +E+ +R+D R TIDP+ A D
Sbjct: 225 NTEMHAILAEYDLPYT-YPKEVEQEADKIPAELSADEIAARRDFRGITTLTIDPADAKDF 283
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS+ RL +G VGVHIADV+Y+V PG +D EA+ R+TSVY++ R IPMLP LS
Sbjct: 284 DDALSMRRLPNGNIEVGVHIADVTYYVHPGDIIDAEAENRATSVYLVDRTIPMLPERLSN 343
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+ SL P ++ FS ++LN +V + W GRTVI S + +Y+ AQ +I+
Sbjct: 344 GLCSLRPNEEKFCFSAVFELNEEAEVQNEWFGRTVILSDRRFTYDEAQQVIES------- 396
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTP 475
GQ + SD + ++ +L ++ L+ RF +G++ E + F DE G P
Sbjct: 397 -----------GQGDLSDEITALNAL---ARKLRAARFRNGSISFEREEAKFDLDENGKP 442
Query: 476 YDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPD------SALLRRHPAPNMRKLREF 529
++ N L EEFMLLAN+ AE + R + + R H PN KL +
Sbjct: 443 LRVYFKEMKEANQLIEEFMLLANRKVAEFVGRKRQGVQNSERTFVYRVHDKPNSDKLAQL 502
Query: 530 EAFCSKHGLQLDTSSSGQ-----FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 584
+F + G Q+ + + G+ ++ + K ++ +++ A R M A+Y
Sbjct: 503 RSFVMRFGYQMKSDAVGKALAKDINKLMTNVHGKQEE-----NLISTLAIRTMAKATYTT 557
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
T+ GHY LAF YTHFTSP+RRYPD++VHR L
Sbjct: 558 -------TNIGHYGLAFDYYTHFTSPIRRYPDMMVHRLL 589
>gi|240281814|gb|EER45317.1| mitotic control protein dis3 [Ajellomyces capsulatus H143]
Length = 1037
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 195/563 (34%), Positives = 276/563 (49%), Gaps = 68/563 (12%)
Query: 84 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 143
D E V S ++ + R + +S +PT RVV I++R+ W
Sbjct: 349 DEKEVVVSEKERRALQEEVRRAHGKTSEGRPQPTARVVGIVKRN--------------WR 394
Query: 144 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 203
Y G K + ++ S ++ + + P + PK+ + + D +R+
Sbjct: 395 QYVGNIDKISTASQVQ-SSRRQQTVFVIPMDKRIPKIRIRTRQAQDLFGQRI-------- 445
Query: 204 MELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLS 259
LV +D WN +S +P H + G +G E E A+L E + F L
Sbjct: 446 --LVT--VDAWNRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPQVVLD 497
Query: 260 CLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 313
CLP W+VPQ RKDLR+ + +IDP D+DDAL L +G VGV
Sbjct: 498 CLPPEGHNWKVPQNMDDPGWRDRKDLRDLLVCSIDPPGCQDIDDALHARPLPNGNFEVGV 557
Query: 314 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 373
HIADVS+FV P T +D EA +R T+VY++ ++I MLP+LL ++ SL P V R AFS W
Sbjct: 558 HIADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVQRYAFSTIW 617
Query: 374 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 433
++ + +VV ++VI S SYE AQ ID K + +
Sbjct: 618 EMTPSAEVVSSICTKSVILSREAFSYEQAQLRIDDKSKTD-------------------E 658
Query: 434 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFE 491
+ S++ L ++SK+LK KR GAL L + + D E P V + D N L E
Sbjct: 659 LTESMRLLLKLSKLLKQKRMDAGALNLASPEVRIETDSELSDPVADVKTKALLDTNSLVE 718
Query: 492 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQFHQ 550
EFML AN T A I ++FP +ALLRRH P E A S K + LD SSS +
Sbjct: 719 EFMLHANTTVASKIFKSFPQTALLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLALAR 778
Query: 551 SLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
SL++ + F+ L+ ATR M A YFC+G ++++ HY LA +YTHFTS
Sbjct: 779 SLDRCVDPANP---FFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASSIYTHFTS 834
Query: 610 PLRRYPDLVVHRTLNAALEAEKL 632
P+RRY DLVVHR L AA+ E L
Sbjct: 835 PIRRYADLVVHRQLAAAIGYEGL 857
>gi|317474743|ref|ZP_07934017.1| ribonuclease R [Bacteroides eggerthii 1_2_48FAA]
gi|316909424|gb|EFV31104.1| ribonuclease R [Bacteroides eggerthii 1_2_48FAA]
Length = 719
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 154/429 (35%), Positives = 225/429 (52%), Gaps = 45/429 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G+ G+ +++AIL E + P S+ +P E+
Sbjct: 198 KVVEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPTSVEKAADKIPAEI 255
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
P EE R+D RN FTIDP A D DDALS+ +L D + VGVHIADV+++V G+ +
Sbjct: 256 PAEEYAKREDFRNITTFTIDPKDAKDFDDALSVRKLKDNLWEVGVHIADVTHYVTEGSII 315
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S +++ G++ + I
Sbjct: 316 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAYSAIFEMTDKGEIKNSRIVH 375
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI+S + +YE AQ II+ K EG D I L ++KIL
Sbjct: 376 TVIKSDRRFTYEEAQQIIETK----------EG-----------DFKEEILKLDALAKIL 414
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 415 REKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKIGRV 474
Query: 509 ----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
P R H P+ KL F ++ G +L TS S + L+ + K
Sbjct: 475 PKSKKPKVFPYRIHDLPDPEKLDNLSQFIARFGYKLRTSGTKTDVSKSINHLLDDIQGKK 534
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY L+F YTHFTSP+RRYPD++V
Sbjct: 535 EE-----NLIETVSIRAMQKARYSVH-------NIGHYGLSFDYYTHFTSPIRRYPDMLV 582
Query: 620 HRTLNAALE 628
HR L L+
Sbjct: 583 HRLLTKYLD 591
>gi|423328277|ref|ZP_17306084.1| ribonuclease R [Myroides odoratimimus CCUG 3837]
gi|404605180|gb|EKB04793.1| ribonuclease R [Myroides odoratimimus CCUG 3837]
Length = 725
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 258/517 (49%), Gaps = 54/517 (10%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
K+P G VV I+ER ++ VG + + + F + S DAK
Sbjct: 131 KKPEGEVVEILERHKKQ--FVGVIEIQKNFAF--VSTADAKM------------------ 168
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
Y + V P +GD +V I++W E++ P V+ V G+ G
Sbjct: 169 ---YTDIFV-----PKEKVGEARDGD------VVVVEIEDWPEKADSPFGKVMKVLGKQG 214
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
E +I+AIL E + F E + + +EE+ R+D+R+ FTIDP A
Sbjct: 215 EHNTEIHAILAEYGLTAE-FPKEVDEYANHLDTSITEEEIAKRRDMRDILTFTIDPKDAK 273
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D DDALS +L +G +G+HIADVS++V GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 274 DFDDALSFRQLENGFYEIGIHIADVSHYVKEGTILDEEAYNRATSVYLVDRTVPMLPEVL 333
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S SL P D+ FS ++L+ ++ ++W GRTV S +++YE AQ IID K V
Sbjct: 334 SNFACSLRPNEDKYTFSAVFELDDKAEIRNKWFGRTVTHSDQRMAYEEAQYIIDSKDRVI 393
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 473
++ G Q + +V ++ L E++ I++ R +DGA+ + + F +E
Sbjct: 394 PADISLTGENQEISE----EVADAVLKLNELAMIMRKNRMSDGAISFDKVEVKFNLNEAA 449
Query: 474 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 533
P ++ N L EEFMLLAN+ +E I + + + R H P+ KL +
Sbjct: 450 EPVGVFFKQSKEANHLIEEFMLLANRKVSEFIGKQ-KKTFVYRIHDEPDQEKLFGLQTVI 508
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
++ G ++ S +S+ + + + K + L D L A R M ASY +
Sbjct: 509 ARFGHNINFKSKSSISKSINKLLKDVEGKKEQNLVDTL---AIRCMSKASYSTN------ 559
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
+ GHY LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 560 -NIGHYGLAFDYYSHFTSPIRRYPDVMAHRLLQHYLD 595
>gi|423129008|ref|ZP_17116683.1| ribonuclease R [Myroides odoratimimus CCUG 12901]
gi|371649850|gb|EHO15326.1| ribonuclease R [Myroides odoratimimus CCUG 12901]
Length = 725
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 258/517 (49%), Gaps = 54/517 (10%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
K+P G VV I+ER ++ VG + + + F + S DAK
Sbjct: 131 KKPEGEVVEILERHKKQ--FVGVIEIQKNFAF--VSTADAKM------------------ 168
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
Y + V P +GD +V I++W E++ P V+ V G+ G
Sbjct: 169 ---YTDIFV-----PKEKVGEARDGD------VVVVEIEDWPEKADSPFGKVMKVLGKQG 214
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
E +I+AIL E + F E + + +EE+ R+D+R+ FTIDP A
Sbjct: 215 EHNTEIHAILAEYGLTAE-FPKEVDEYANHLDTSITEEEIAKRRDMRDILTFTIDPKDAK 273
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D DDALS +L +G +G+HIADVS++V GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 274 DFDDALSFRQLENGFYEIGIHIADVSHYVKEGTILDEEAYNRATSVYLVDRTVPMLPEVL 333
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S SL P D+ FS ++L+ ++ ++W GRTV S +++YE AQ IID K V
Sbjct: 334 SNFACSLRPNEDKYTFSAVFELDDKAEIRNKWFGRTVTHSDQRMAYEEAQYIIDSKDRVI 393
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 473
++ G Q + +V ++ L E++ I++ R +DGA+ + + F +E
Sbjct: 394 PADISLTGEDQEVSE----EVADAVLKLNELAMIMRKNRMSDGAISFDKVEVKFNLNEAA 449
Query: 474 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 533
P ++ N L EEFMLLAN+ +E I + + + R H P+ KL +
Sbjct: 450 EPVGVFFKQSKEANHLIEEFMLLANRKVSEFIGKQ-KKTFVYRIHDEPDQEKLFGLQTVI 508
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
++ G ++ S +S+ + + + K + L D L A R M ASY +
Sbjct: 509 ARFGHNINFKSKSSISKSINKLLKDVEGKKEQNLVDTL---AIRCMSKASYSTN------ 559
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
+ GHY LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 560 -NIGHYGLAFDYYSHFTSPIRRYPDVMAHRLLQHYLD 595
>gi|423132666|ref|ZP_17120313.1| ribonuclease R [Myroides odoratimimus CIP 101113]
gi|371650043|gb|EHO15517.1| ribonuclease R [Myroides odoratimimus CIP 101113]
Length = 725
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 168/517 (32%), Positives = 258/517 (49%), Gaps = 54/517 (10%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
K+P G VV I+ER ++ VG + + + F + S DAK
Sbjct: 131 KKPEGEVVEILERHKKQ--FVGVIEIQKNFAF--VSTADAKM------------------ 168
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
Y + V P +GD +V I++W E++ P V+ V G+ G
Sbjct: 169 ---YTDIFV-----PKEKVGEARDGD------VVVVEIEDWPEKADSPFGKVMKVLGKQG 214
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
E +I+AIL E + F E + + +EE+ R+D+R+ FTIDP A
Sbjct: 215 EHNTEIHAILAEYGLTAE-FPKEVDEYANHLDTSITEEEIAKRRDMRDILTFTIDPKDAK 273
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D DDALS +L +G +G+HIADVS++V GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 274 DFDDALSFRQLENGFYEIGIHIADVSHYVKEGTILDEEAYNRATSVYLVDRTVPMLPEVL 333
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S SL P D+ FS ++L+ ++ ++W GRTV S +++YE AQ IID K V
Sbjct: 334 SNFACSLRPNEDKYTFSAVFELDDKAEIRNKWFGRTVTHSDQRMAYEEAQYIIDSKDRVI 393
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 473
++ G Q + +V ++ L E++ I++ R +DGA+ + + F +E
Sbjct: 394 PADISLTGENQEISE----EVADAVLKLNELAMIMRKNRMSDGAISFDKVEVKFNLNEAA 449
Query: 474 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFC 533
P ++ N L EEFMLLAN+ +E I + + + R H P+ KL +
Sbjct: 450 EPVGVFFKQSKEANHLIEEFMLLANRKVSEFIGKQ-KKTFVYRIHDEPDQEKLFGLQTVI 508
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
++ G ++ S +S+ + + + K + L D L A R M ASY +
Sbjct: 509 ARFGHNINFKSKSSISKSINKLLKDVEGKKEQNLVDTL---AIRCMSKASYSTN------ 559
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
+ GHY LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 560 -NIGHYGLAFDYYSHFTSPIRRYPDVMAHRLLQHYLD 595
>gi|150003660|ref|YP_001298404.1| ribonuclease R [Bacteroides vulgatus ATCC 8482]
gi|294777520|ref|ZP_06742971.1| ribonuclease R [Bacteroides vulgatus PC510]
gi|319640119|ref|ZP_07994846.1| ribonuclease R [Bacteroides sp. 3_1_40A]
gi|345517140|ref|ZP_08796618.1| ribonuclease R [Bacteroides sp. 4_3_47FAA]
gi|149932084|gb|ABR38782.1| ribonuclease R [Bacteroides vulgatus ATCC 8482]
gi|254833905|gb|EET14214.1| ribonuclease R [Bacteroides sp. 4_3_47FAA]
gi|294448588|gb|EFG17137.1| ribonuclease R [Bacteroides vulgatus PC510]
gi|317388397|gb|EFV69249.1| ribonuclease R [Bacteroides sp. 3_1_40A]
Length = 715
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 178/567 (31%), Positives = 271/567 (47%), Gaps = 85/567 (14%)
Query: 73 NYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDG 132
N N P T ++ MN + A+ + + P G V+ I+ER+ D
Sbjct: 93 NGKNSFIPDDGGETIFIAERNSAHAMNNDKVKIALFAKRKNRNPEGEVIEILERA--NDT 150
Query: 133 IVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDL--PDS 190
VG L V +++ + L +R L D+ P
Sbjct: 151 FVGTLKVEKFYAF--------------LLTENR----------------TLANDIFIPKD 180
Query: 191 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 250
K + GD + +I EW EE+ P V+ + G+ GE +++AIL E +
Sbjct: 181 KLKGGKNGDKAV------VKIVEWPEEAKNPIGQVIDILGKAGENTTEMHAILAEFGLPY 234
Query: 251 SGFSPESL-SCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 309
P+++ + +P E+ + + R+D RN FTIDP A D DDALSI + G+
Sbjct: 235 --VYPKNVETAAEKIPAEISEADYAEREDFRNVTTFTIDPKDAKDFDDALSIRLIKPGLW 292
Query: 310 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 369
VGVHIADV+++V G +D EA+ R+TSVY++ R IPMLP L + SL P ++LAF
Sbjct: 293 EVGVHIADVTHYVKEGGVIDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAF 352
Query: 370 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 429
S+ +++N G+V D I T+I+S + +YE AQ +I+ GEG
Sbjct: 353 SVIFNMNEKGEVKDSRIVHTIIKSDRRFTYEEAQKVIE----------TGEG-------- 394
Query: 430 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFL 489
D I L ++++IL+ +R GA+ + + F DE G P ++ N L
Sbjct: 395 ---DYKEEILELNKLAQILRKQRLAAGAIDFDRVEVKFEIDETGKPLSVYFKESKEANKL 451
Query: 490 FEEFMLLANKTAAEVI--------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD 541
EEFMLLAN+T AE I A+ FP R H P+ KL F ++ G ++
Sbjct: 452 IEEFMLLANRTVAEKIGKVPKNKKAKVFP----YRIHDLPDPDKLENLNWFINRFGYKIR 507
Query: 542 TS-SSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALA 600
TS S + +S+ + + +K+ +++ + R MQ A Y + GHY LA
Sbjct: 508 TSGSKTEISKSINRLLDDIKNKKEQ-NLVETVSLRAMQKARYSTH-------NIGHYGLA 559
Query: 601 FPVYTHFTSPLRRYPDLVVHRTLNAAL 627
F YTHFTSP+RR+PD++VHR L L
Sbjct: 560 FDYYTHFTSPIRRFPDMMVHRLLTRYL 586
>gi|225558893|gb|EEH07176.1| mitotic control protein dis3 [Ajellomyces capsulatus G186AR]
Length = 1037
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 193/563 (34%), Positives = 274/563 (48%), Gaps = 68/563 (12%)
Query: 84 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 143
D E V S ++ + R + +S +PT RVV I++R+ W
Sbjct: 349 DEKEVVVSEKERRALQEEVRRAHGKTSEGRPQPTARVVGIVKRN--------------WR 394
Query: 144 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 203
Y G K + ++ S ++ + + P + PK+ + + D +R
Sbjct: 395 QYVGNIDKISTASQVQ-SSRRQQTVFVIPMDKRIPKIRIRTRQAQDLFGQR--------- 444
Query: 204 MELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLS 259
+ +D WN +S +P H + G +G E E A+L E + F L
Sbjct: 445 ---ILVTVDAWNRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPQVVLD 497
Query: 260 CLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 313
CLP W+VPQ RKDLR+ + +IDP D+DDAL L +G VGV
Sbjct: 498 CLPPEGHNWKVPQNMDDPGWRDRKDLRDLLVCSIDPPGCQDIDDALHARPLPNGNFEVGV 557
Query: 314 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 373
HIADVS+FV P T +D EA +R T+VY++ ++I MLP+LL ++ SL P V R AFS W
Sbjct: 558 HIADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVQRYAFSTIW 617
Query: 374 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 433
++ + +VV ++VI S SYE AQ ID K + +
Sbjct: 618 EMTPSAEVVSSICTKSVILSREAFSYEQAQLRIDDKSKTD-------------------E 658
Query: 434 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFE 491
+ S++ L ++SK+LK KR GAL L + + D E P V + D N L E
Sbjct: 659 LTESMRLLLKLSKLLKQKRMDAGALNLASPEVRIETDSELSDPVADVKTKALLDTNSLVE 718
Query: 492 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQFHQ 550
EFML AN T A I ++FP +ALLRRH P E A S K + LD SSS +
Sbjct: 719 EFMLHANTTVASKIFKSFPQTALLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLALAR 778
Query: 551 SLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
SL++ + F+ L+ ATR M A YFC+G ++++ HY LA +YTHFTS
Sbjct: 779 SLDRCVDPANP---FFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASSIYTHFTS 834
Query: 610 PLRRYPDLVVHRTLNAALEAEKL 632
P+RRY DLVVHR L AA+ E L
Sbjct: 835 PIRRYADLVVHRQLAAAIGYEGL 857
>gi|423313194|ref|ZP_17291130.1| ribonuclease R [Bacteroides vulgatus CL09T03C04]
gi|392686408|gb|EIY79714.1| ribonuclease R [Bacteroides vulgatus CL09T03C04]
Length = 715
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 178/567 (31%), Positives = 271/567 (47%), Gaps = 85/567 (14%)
Query: 73 NYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDG 132
N N P T ++ MN + A+ + + P G V+ I+ER+ D
Sbjct: 93 NGKNSFIPDDGGETIFIAERNSAHAMNNDKVKIALFAKRKNRNPEGEVIEILERA--NDT 150
Query: 133 IVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDL--PDS 190
VG L V +++ + L +R L D+ P
Sbjct: 151 FVGTLKVEKFYAF--------------LLTENR----------------TLANDIFIPKD 180
Query: 191 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 250
K + GD + +I EW EE+ P V+ + G+ GE +++AIL E +
Sbjct: 181 KLKGGKNGDKAV------VKIVEWPEEAKNPIGQVIDILGKAGENTTEMHAILAEFGLPY 234
Query: 251 SGFSPESL-SCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 309
P+++ + +P E+ + + R+D RN FTIDP A D DDALSI + G+
Sbjct: 235 --VYPKNVETAAEKIPAEISEADYAEREDFRNVTTFTIDPKDAKDFDDALSIRLIKPGLW 292
Query: 310 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 369
VGVHIADV+++V G +D EA+ R+TSVY++ R IPMLP L + SL P ++LAF
Sbjct: 293 EVGVHIADVTHYVKEGGVIDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAF 352
Query: 370 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 429
S+ +++N G+V D I T+I+S + +YE AQ +I+ GEG
Sbjct: 353 SVIFNMNEKGEVKDSRIVHTIIKSDRRFTYEEAQKVIE----------TGEG-------- 394
Query: 430 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFL 489
D I L ++++IL+ +R GA+ + + F DE G P ++ N L
Sbjct: 395 ---DYKEEILELNKLAQILRKQRLVAGAIDFDRVEVKFEIDETGKPLSVYFKESKEANKL 451
Query: 490 FEEFMLLANKTAAEVI--------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD 541
EEFMLLAN+T AE I A+ FP R H P+ KL F ++ G ++
Sbjct: 452 IEEFMLLANRTVAEKIGKVPKNKKAKVFP----YRIHDLPDPDKLENLNWFINRFGYKIR 507
Query: 542 TS-SSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALA 600
TS S + +S+ + + +K+ +++ + R MQ A Y + GHY LA
Sbjct: 508 TSGSKTEISKSINRLLDDIKNKKEQ-NLVETVSLRAMQKARYSTH-------NIGHYGLA 559
Query: 601 FPVYTHFTSPLRRYPDLVVHRTLNAAL 627
F YTHFTSP+RR+PD++VHR L L
Sbjct: 560 FDYYTHFTSPIRRFPDMMVHRLLTRYL 586
>gi|68072245|ref|XP_678036.1| mitotic control protein [Plasmodium berghei strain ANKA]
gi|56498374|emb|CAI00312.1| mitotic control protein dis3 homologue, putative [Plasmodium
berghei]
Length = 1015
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 173/533 (32%), Positives = 263/533 (49%), Gaps = 66/533 (12%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
K+ G+V+ II RS + GG K ++++ + + +
Sbjct: 411 KKLYGKVIGIISRSRKE---------------YGGVIKSCDNDKNNKYIEKLLFFK--AF 453
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ K P ++ IK +EE + + V ID+W+ S +P L V G
Sbjct: 454 NSKIPHII---------IKSNMEE---ELSNKRVIVTIDKWDFNSKYPLGRCLSVLGVCD 501
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
++E + I E I FS + LP W +P+EE R D RN F+IDP
Sbjct: 502 DIEAETKLIYNEYNISTKEFSESAYLSLPPSNWVIPEEEFSKRIDFRNILTFSIDPPGCQ 561
Query: 294 DLDDALSIERLSD-GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D+DDALS+E L D I +VGVHIADVSYFV +ALD+EA R T+VY+ +++ MLP L
Sbjct: 562 DIDDALSVEILEDEKIIKVGVHIADVSYFVKQNSALDLEASKRCTTVYLTNQRVDMLPKL 621
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
L+ ++ SL DRL +S + N+ D++D I + +I S +YE AQ+IID D
Sbjct: 622 LTTDLCSLVEKQDRLTYSCIFTFNTNYDILDINIAKCIINSDRSFTYEQAQNIIDDSNDT 681
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE-NSKPVFLFDE 471
S + S++ L ++K LK K++ + AL L+ NS+ VF F++
Sbjct: 682 SS-------------------IAISLRLLNSIAKDLK-KKWLNDALELKGNSEVVFEFEQ 721
Query: 472 YG-------TPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 524
PY + + R L E FMLLAN++ A +I + F + +LRRHP P
Sbjct: 722 KDFTKTKNLKPYITYETNR-----LIEAFMLLANRSVARIIFQNFKAACILRRHPPPKYD 776
Query: 525 KLREFEAFC-SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 583
L+E + + S ++S + S+ LK+D +L +IL T+ M A +
Sbjct: 777 TLKELDEYLQSIKVYDFKFNTSKELSYSINNIN--LKNDKILSNILKTLVTKCMNEAIFI 834
Query: 584 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
+ ++ HY LA +YT FTSP+RRY D++VHR LN EKL+ K+
Sbjct: 835 SGYNVHNNDMLRHYGLAADIYTFFTSPIRRYADIMVHRILNHIYGIEKLHNKY 887
>gi|160884747|ref|ZP_02065750.1| hypothetical protein BACOVA_02736 [Bacteroides ovatus ATCC 8483]
gi|237721941|ref|ZP_04552422.1| ribonuclease R [Bacteroides sp. 2_2_4]
gi|423291213|ref|ZP_17270061.1| ribonuclease R [Bacteroides ovatus CL02T12C04]
gi|423293671|ref|ZP_17271798.1| ribonuclease R [Bacteroides ovatus CL03T12C18]
gi|156109782|gb|EDO11527.1| ribonuclease R [Bacteroides ovatus ATCC 8483]
gi|229448810|gb|EEO54601.1| ribonuclease R [Bacteroides sp. 2_2_4]
gi|392663824|gb|EIY57369.1| ribonuclease R [Bacteroides ovatus CL02T12C04]
gi|392677629|gb|EIY71045.1| ribonuclease R [Bacteroides ovatus CL03T12C18]
Length = 718
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/434 (35%), Positives = 228/434 (52%), Gaps = 53/434 (12%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E+
Sbjct: 197 KVTEWPDKAKNPIGQVIDILGQAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAEI 254
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G+ +
Sbjct: 255 SAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGSII 314
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 315 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVRDSRIVH 374
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K EG D + +L ++K L
Sbjct: 375 TVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKAL 413
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI--- 505
++KRF+ GA+ + + F DE G P +D N L EEFMLLANKT AE I
Sbjct: 414 REKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGCV 473
Query: 506 -----ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQA 555
A+ P R H P+ KL F ++ G ++ TS S + L+
Sbjct: 474 PKNKKAKVLP----YRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDI 529
Query: 556 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+P
Sbjct: 530 HGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRFP 577
Query: 616 DLVVHRTLNAALEA 629
D++VHR + ++
Sbjct: 578 DMMVHRLVTKYMDG 591
>gi|401623683|gb|EJS41773.1| dis3p [Saccharomyces arboricola H-6]
Length = 1001
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 178/497 (35%), Positives = 258/497 (51%), Gaps = 50/497 (10%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
++++ K LP I+ + I+ +V + ID W +P H + G + +
Sbjct: 424 VILMDKCLP-KIRIKTRRAAELIDKRIVIS-IDSWPTTHKYPLGHFVRDLGTVESAQAET 481
Query: 240 NAILYENAICCSGFSPESLSCLPCV------------PWEVPQEELLS-RKDLRNFCIFT 286
A+L E+ + FS + L CLP P V ++ LL+ RKDLR+ I +
Sbjct: 482 EALLLEHDVEYRPFSNKVLECLPAEGHDWKAPTKLDDPEAVAKDALLTKRKDLRDKQICS 541
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP D+DDAL ++L +G VGVHIADV++FV PGTALD E R TSVY++ ++I
Sbjct: 542 IDPPGCVDIDDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEGAARGTSVYLVDKRI 601
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP+LL ++ SL P VDR AFS+ W+L+ ++V+ ++VI+S SYE AQ I
Sbjct: 602 DMLPMLLGTDLCSLKPYVDRFAFSVIWELDDDANIVNVSFMKSVIKSREAFSYEQAQFRI 661
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-P 465
D K + TLG +++L ++S LK KR GAL L + +
Sbjct: 662 DDK-NQNDELTLG------------------MRALLKLSIKLKQKRLEAGALNLASPEVK 702
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP---N 522
V + E P + + N L EEFMLLAN + A I AFP +A+LRRH AP N
Sbjct: 703 VHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAAPPSTN 762
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
L E ++ + + SS SL++ + +D Y F+ L+ +TR M A
Sbjct: 763 FEVLNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNTLVRIMSTRCMMAAQ 817
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR---- 637
YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 818 YFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNK 876
Query: 638 -RMLPKNNHREGVRGRF 653
M+ +N +R+ +F
Sbjct: 877 MDMICRNINRKHRNAQF 893
>gi|436834031|ref|YP_007319247.1| ribonuclease R [Fibrella aestuarina BUZ 2]
gi|384065444|emb|CCG98654.1| ribonuclease R [Fibrella aestuarina BUZ 2]
Length = 898
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 160/427 (37%), Positives = 219/427 (51%), Gaps = 48/427 (11%)
Query: 212 DEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE 271
D +E+ F + V+ V G+ GE +++AIL E + F E +P + +
Sbjct: 310 DAGDEDGLF-EGEVVTVLGKAGEHNTEMHAILAEFGLPNE-FPAEVERESEEIPVTIDEA 367
Query: 272 ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 331
E+ R+D R FTIDP A D DDALS+ L +G +GVHIADV+++VLPGT L+ E
Sbjct: 368 EIARRRDFRGVTTFTIDPVDAKDFDDALSVRYLDNGNYEIGVHIADVTHYVLPGTELEEE 427
Query: 332 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVI 391
A R+TSVY++ R +PMLP LS V SL P D+L FS ++L + + W GRT I
Sbjct: 428 AYKRATSVYLVDRVVPMLPEKLSNGVCSLRPHEDKLTFSAVFELTTDAKIEAEWFGRTAI 487
Query: 392 RSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDK 451
S + SYE AQ I++ GEG D V+ + L E++ L+D+
Sbjct: 488 HSDRRFSYEEAQAILNA----------GEG-----------DFVKELTLLNELAHKLRDQ 526
Query: 452 RFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA--RAF 509
RF GA+ E + F DE G P V R+D N L EEFMLLANK AE +
Sbjct: 527 RFRHGAINFETPEVRFKLDENGVPLAVVPKIRQDTNKLIEEFMLLANKRVAEFVVSLSKG 586
Query: 510 PD--SALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS------GQFHQSLEQAREKLKD 561
PD + + R H PN KL+ F F K G +L+ +S +F +E E+
Sbjct: 587 PDENTMVYRVHEGPNEDKLQVFADFARKLGYKLNVTSDKLSTAMNKFMADIEGKPEQT-- 644
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+L A R M A Y D GH+ LAF Y+HFTSP+RRYPD++ HR
Sbjct: 645 ------MLSQLAVRTMSKARYSTD-------DIGHFGLAFRRYSHFTSPIRRYPDMMAHR 691
Query: 622 TLNAALE 628
L L+
Sbjct: 692 LLQHYLD 698
>gi|298482589|ref|ZP_07000774.1| ribonuclease R [Bacteroides sp. D22]
gi|336405445|ref|ZP_08586124.1| ribonuclease R [Bacteroides sp. 1_1_30]
gi|295085725|emb|CBK67248.1| RNAse R [Bacteroides xylanisolvens XB1A]
gi|298271296|gb|EFI12872.1| ribonuclease R [Bacteroides sp. D22]
gi|335938026|gb|EGM99920.1| ribonuclease R [Bacteroides sp. 1_1_30]
Length = 718
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/434 (35%), Positives = 228/434 (52%), Gaps = 53/434 (12%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E+
Sbjct: 197 KVTEWPDKAKNPIGQVIDILGQAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAEI 254
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G+ +
Sbjct: 255 SAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGSII 314
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 315 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVRDSRIVH 374
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K EG D + +L ++K L
Sbjct: 375 TVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKAL 413
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI--- 505
++KRF+ GA+ + + F DE G P +D N L EEFMLLANKT AE I
Sbjct: 414 REKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGCV 473
Query: 506 -----ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQA 555
A+ P R H P+ KL F ++ G ++ TS S + L+
Sbjct: 474 PKNKKAKVLP----YRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDI 529
Query: 556 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+P
Sbjct: 530 HGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRFP 577
Query: 616 DLVVHRTLNAALEA 629
D++VHR + ++
Sbjct: 578 DMMVHRLVTKYMDG 591
>gi|340502589|gb|EGR29265.1| rnb family protein, putative [Ichthyophthirius multifiliis]
Length = 852
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 251/489 (51%), Gaps = 44/489 (8%)
Query: 172 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
P + +YP+M+ + L D+IKK I+ V + W P + G
Sbjct: 298 PNNNRYPRMIPI---LGDNIKK----FQGQIKDFYVKGTLKNWERNQQNPTILCEDILGS 350
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWE----VPQEELLSRKDLRNFCIFTI 287
G++E + A+L EN I FS ++ L E +P+EE R DL IFTI
Sbjct: 351 IGDIEIECRALLEENQIISDDFSIKTKEYLDKKVNEQEEIIPKEERKKRLDLTKEIIFTI 410
Query: 288 DPSTATDLDDALSIERL-SDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
DP A DLDDALSI+ + + I +GVHIADVS+FV G+ +D++AQ+R+TSVY++ R I
Sbjct: 411 DPVDARDLDDALSIKLIEKNKIVEIGVHIADVSFFVKEGSPVDLDAQLRTTSVYLVHRVI 470
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW---IGRTVIRSCCKLSYEHAQ 403
MLP +L + + SLN +RLAFS+F+ ++ G+++ + +++I SC K SY+ Q
Sbjct: 471 TMLPRILCDNLCSLNSNAERLAFSVFFQMDFQGNLIQDFKPIFVKSIINSCSKFSYDTVQ 530
Query: 404 DIIDGKFDVESSNTLGEGWPQLY-------GQFEWSDVVRS-------IKSLYEVSKI-- 447
IIDG+ S + QLY Q + VR + + +SKI
Sbjct: 531 KIIDGEIQNYSQIII-----QLYINKYIINRQLPEQNKVREGINGDEMFEKILLLSKIGM 585
Query: 448 -LKDKRFTDGALRLENSKPVFLFDEYGT-PYDSVLSGREDLNFLFEEFMLLANKTAAEVI 505
+ +R +G L +ENSK F D P + R++ NF+ EEFMLLAN+ + I
Sbjct: 586 EKRKRRTENGVLTIENSKKRFCLDPNTLFPQSYTIEVRKEANFIVEEFMLLANQLVGKKI 645
Query: 506 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ-LDTSSSGQFHQSLE--QAREKLKDD 562
+ + ++LRRH P +K F K LQ + + Q L+ Q E + +
Sbjct: 646 VESCEEISVLRRHEYPQEKKQERFNDTLEKLKLQKIQFKNLNQLINFLKEIQQNENISEQ 705
Query: 563 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
+F L ++ A YF + + D W H+AL F VYTHFTSP+RRYPDL+VHR
Sbjct: 706 KKIF--LKKQLFLILEPAQYFIANLLEKDQ-WKHFALNFDVYTHFTSPIRRYPDLIVHRV 762
Query: 623 LNAALEAEK 631
L L EK
Sbjct: 763 LEQVLLHEK 771
>gi|85818501|gb|EAQ39661.1| ribonuclease R [Dokdonia donghaensis MED134]
Length = 734
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 263/542 (48%), Gaps = 56/542 (10%)
Query: 95 NDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAK 154
N +N E + +K+ G + II+R + + VG + + + F
Sbjct: 113 NKALNGDEVEVYIYRQRRSKKHEGEITKIIKR--KTEEFVGVVKLQKKF----------- 159
Query: 155 KNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEW 214
++ + ++ Y + V +K + D+ ++GD V I++W
Sbjct: 160 -----------AFVLTSESNKMYTDIFVPLKKIGDA-----QDGDK------VVVTIEDW 197
Query: 215 NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELL 274
E++ P + V G+ GE +I++IL + + F E + + +EE+
Sbjct: 198 PEKADSPYGKITKVLGKPGEHNTEIHSILAQYGLPYE-FPKEVEEYANKIDTSIKEEEIA 256
Query: 275 SRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQV 334
R+D+R+ +TIDP A D DDALS ++L +G VGVHIADVS++++PGT LD EA
Sbjct: 257 KRRDMRDVLTYTIDPKDAKDFDDALSFQKLQNGNYEVGVHIADVSHYLVPGTILDDEAYE 316
Query: 335 RSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFS-IFWDLNSAGDVVDRWIGRTVIRS 393
R+TSVY++ R +PMLP +LS SL P ++ FS +F + +V+ W GRTV S
Sbjct: 317 RATSVYLVDRVVPMLPEILSNGACSLRPNEEKYTFSAVFEMVPETSKIVNSWFGRTVTYS 376
Query: 394 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD-VVRSIKSLYEVSKILKDKR 452
+ +YE AQ II+ + SN + ++ +D +V + L ++KI++ +R
Sbjct: 377 DARFAYEEAQAIIESR-----SNIIPAAVSLTGEEYTVTDELVEATLELDRLAKIMRRQR 431
Query: 453 FTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS 512
DGA+ + + F D+ P +D N L EEFMLLAN+ +E I + P
Sbjct: 432 MKDGAISFDKVEVKFNLDDDANPTGVFFKTSKDANKLIEEFMLLANRKVSEFIGKQRPKK 491
Query: 513 ALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDIL 569
+ R H PN KL E K G +++ + SL Q + K + + D L
Sbjct: 492 TFVYRIHDEPNDEKLASLEKVVGKFGYKMNLTDRKSVTSSLNQLLVDVQGKKEQNMVDTL 551
Query: 570 INYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
A R M A Y + GHY LAF Y+HFTSP+RRYPD++VHR L L+
Sbjct: 552 ---AIRTMSKAVYSTE-------NIGHYGLAFEYYSHFTSPIRRYPDVMVHRLLQHYLDG 601
Query: 630 EK 631
K
Sbjct: 602 GK 603
>gi|448262642|pdb|4IFD|J Chain J, Crystal Structure Of An 11-subunit Eukaryotic Exosome
Complex Bound To Rna
Length = 1003
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 176/497 (35%), Positives = 259/497 (52%), Gaps = 50/497 (10%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
++++ K LP ++ R ++ +V + ID W +P H + G + +
Sbjct: 426 VILMDKCLP-KVRIRTRRAAELLDKRIVIS-IDSWPTTHKYPLGHFVRDLGTIESAQAET 483
Query: 240 NAILYENAICCSGFSPESLSCLPCV------------PWEVPQEELLS-RKDLRNFCIFT 286
A+L E+ + FS + L CLP P V ++ LL+ RKDLR+ I +
Sbjct: 484 EALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPLLTKRKDLRDKLICS 543
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP D++DAL ++L +G VGVHIADV++FV PGTALD E R TSVY++ ++I
Sbjct: 544 IDPPGCVDINDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEGAARGTSVYLVDKRI 603
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIRS SYE AQ I
Sbjct: 604 DMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSYEQAQLRI 663
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-P 465
D K ++ L G +++L ++S LK KR GAL L + +
Sbjct: 664 DDK---TQNDELTMG----------------MRALLKLSVKLKQKRLEAGALNLASPEVK 704
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP---N 522
V + E P + + N L EEFMLLAN + A I AFP +A+LRRH AP N
Sbjct: 705 VHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAAPPSTN 764
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
L E ++ + + SS SL++ + +D Y F+ L+ +TR M A
Sbjct: 765 FEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNTLVRIMSTRCMMAAQ 819
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR---- 637
YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 820 YFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNK 878
Query: 638 -RMLPKNNHREGVRGRF 653
M+ +N +R+ +F
Sbjct: 879 MDMICRNINRKHRNAQF 895
>gi|336412863|ref|ZP_08593216.1| ribonuclease R [Bacteroides ovatus 3_8_47FAA]
gi|335942909|gb|EGN04751.1| ribonuclease R [Bacteroides ovatus 3_8_47FAA]
Length = 718
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 153/434 (35%), Positives = 228/434 (52%), Gaps = 53/434 (12%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E+
Sbjct: 197 KVTEWPDKAKNPIGQVIDILGQAGDNTTEMHAILAEFGLPY--VYPKTVETAADKIPAEI 254
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G+ +
Sbjct: 255 SAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGSII 314
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 315 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVRDSRIVH 374
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K EG D + +L ++K L
Sbjct: 375 TVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKAL 413
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI--- 505
++KRF+ GA+ + + F DE G P +D N L EEFMLLANKT AE I
Sbjct: 414 REKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGCV 473
Query: 506 -----ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQA 555
A+ P R H P+ KL F ++ G ++ TS S + L+
Sbjct: 474 PKNKKAKVLP----YRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDI 529
Query: 556 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+P
Sbjct: 530 HGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRFP 577
Query: 616 DLVVHRTLNAALEA 629
D++VHR + ++
Sbjct: 578 DMMVHRLVTKYMDG 591
>gi|313675162|ref|YP_004053158.1| RNAse r [Marivirga tractuosa DSM 4126]
gi|312941860|gb|ADR21050.1| RNAse R [Marivirga tractuosa DSM 4126]
Length = 721
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 229/432 (53%), Gaps = 41/432 (9%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V A I W + P+A V+ V G GE E +I++I+ E + F + +
Sbjct: 196 VIAEIKSWGDLDRKPEAKVIKVLGPAGENEAEIHSIMAEFELPME-FPEAVIKESEKISD 254
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
++P++E+ R+D+R+ FTIDP A D DDA+S +RL +G +G+HIADV+Y+V PGT
Sbjct: 255 KLPEKEIAKRRDMRDTTTFTIDPEDAKDFDDAISFKRLDNGHYEIGIHIADVTYYVQPGT 314
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
L+ EA R+TSVY++ R IPMLP LS + SL P D+ FS ++L+ G + + W
Sbjct: 315 LLEEEAFHRATSVYLVDRTIPMLPERLSNGLCSLRPNEDKFTFSAVFELDDNGTIHNEWF 374
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
GRT+ S + +YE AQ I++ + +G+ +L+ SL ++K
Sbjct: 375 GRTITHSDRRFAYEEAQAILEAR--------IGDHAEELH-------------SLNSIAK 413
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
LK RF GA+ E+ + F DE G P V R+D + L EE+MLLAN+ AE IA
Sbjct: 414 NLKATRFKHGAIAFESVEVKFKLDENGKPLGVVPKVRQDAHKLVEEYMLLANRKVAEFIA 473
Query: 507 -RAFPDSAL---LRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
+ D L R+H P+ KL F F + G +L+ +++ ++ L +D
Sbjct: 474 TKKKGDQKLTFVYRQHDYPDPEKLSTFSIFAKRFGHELEIEE-----KAVAKSLNSLMND 528
Query: 563 YV---LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++L + A R M A Y F H+ LAF YTHFTSP+RRYPD++V
Sbjct: 529 IQGKPEQNVLESLAIRSMAKAKYTTKNSF-------HFGLAFQYYTHFTSPIRRYPDVMV 581
Query: 620 HRTLNAALEAEK 631
HR L L+ K
Sbjct: 582 HRLLQHYLDQGK 593
>gi|301103576|ref|XP_002900874.1| DIS3-like exonuclease 1, putative [Phytophthora infestans T30-4]
gi|262101629|gb|EEY59681.1| DIS3-like exonuclease 1, putative [Phytophthora infestans T30-4]
Length = 1369
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 207/723 (28%), Positives = 320/723 (44%), Gaps = 113/723 (15%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PTG++V I+ RSPR A S++S D +Y P
Sbjct: 620 PTGQIVGILSRSPRYHV--------------------ATVIASTVSTGD-DYALAVPMDQ 658
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ PK+ + + L + KRL+ ID W +S +P H + + G G +
Sbjct: 659 RLPKVRIRSQRLDALLDKRLK------------VVIDSWAADSSYPNGHYVGILGTPGSL 706
Query: 236 EPQINAILYENAICCSGFSPESLSCLP------------CVP---------------WEV 268
+ +++A+L +N + + FS +L+CLP CV WEV
Sbjct: 707 QTELSALLVDNEVEEAPFSEAALACLPSSEECPIDIEGGCVAECSTAKRPARCGLLNWEV 766
Query: 269 PQEELLSRKDLRN-FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 327
P+EE R+DLR +F++DP D+DDA+SI RL +G +GVHIADVSYFV G+A
Sbjct: 767 PEEETPRRRDLRTTHRVFSVDPHGCQDIDDAMSICRLPNGNVELGVHIADVSYFVEHGSA 826
Query: 328 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG-DVVDR-- 384
LD+E + R T+VY++ +++ MLP +LS ++ SL+ DR A S+ W+LN DVVD
Sbjct: 827 LDLEGRRRGTTVYLVGQRLDMLPSVLSADLCSLHENRDRFAVSVMWELNGETYDVVDNST 886
Query: 385 WIGRTVIRSCCKLSYEHAQDII-DGKFDVESSNTLGEGWPQLY----------GQFEW-- 431
W GRT+IR+C ++YE A ++ D DV+ G Q + G+
Sbjct: 887 WFGRTIIRNCSSMTYEQAHRLLQDVNADVDDVPRRGSTRSQPHKDEHVEGVAGGRIPLQL 946
Query: 432 -SDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL---FDEYGTPYDSVLSGREDLN 487
++ ++ + +V + L R + G L L + V E G D ++ +E L
Sbjct: 947 QQEIREDLRMITDVGRRLSRTRGSQGGLDLSKQEEVRFSLNVSELGQ-EDVEITVKESLE 1005
Query: 488 F--LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 545
E M+ AN T A + +P ALLRRHP P+ + + + +D +++
Sbjct: 1006 IHGTIAELMIFANSTVARRLVECYPTHALLRRHPPPSGDRFTQLVQLAKARDVVIDATNN 1065
Query: 546 GQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK---------DDTDWGH 596
QSL A + D +L + A R M A Y SG D T + H
Sbjct: 1066 FTLQQSLAAAERSGRMDIKTMSLLKSLAVRVMTEAEYVSSGAVAAGDAASANGDVTRFAH 1125
Query: 597 YALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTG 656
Y L YTHFTSP+RRY D++VHR L A++ A K K + V + LT
Sbjct: 1126 YGLGLQYYTHFTSPIRRYADVIVHRQLLASIAAPKTPLKSTSQRYTSIAAPLVLPKTLTP 1185
Query: 657 IFYDKDAAESLEGREALSV-AALKYGV-PCADILVN-----------------VATHCND 697
D + E SV + L+ P D+ VN +A H N
Sbjct: 1186 SVLDAEDDEDFLDDLISSVDSQLQVATAPAQDVAVNEAIMDRSTLFPAEELVPLARHLNK 1245
Query: 698 RKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVE 757
+ + AC L++ + V + A + AL +Y+ K + +Y +
Sbjct: 1246 KNRQAKLAAHACDALFLALYFSSHTVKVP-AIITALKQNGFIVYVPKYDLRAPVYLRDKS 1304
Query: 758 GLI 760
G++
Sbjct: 1305 GVV 1307
>gi|266618486|pdb|2WP8|J Chain J, Yeast Rrp44 Nuclease
Length = 977
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 176/497 (35%), Positives = 259/497 (52%), Gaps = 50/497 (10%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
++++ K LP ++ R ++ +V + ID W +P H + G + +
Sbjct: 400 VILMDKCLP-KVRIRTRRAAELLDKRIVIS-IDSWPTTHKYPLGHFVRDLGTIESAQAET 457
Query: 240 NAILYENAICCSGFSPESLSCLPCV------------PWEVPQEELLS-RKDLRNFCIFT 286
A+L E+ + FS + L CLP P V ++ LL+ RKDLR+ I +
Sbjct: 458 EALLLEHDVEYRPFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPLLTKRKDLRDKLICS 517
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP D++DAL ++L +G VGVHIADV++FV PGTALD E R TSVY++ ++I
Sbjct: 518 IDPPGCVDINDALHAKKLPNGNWEVGVHIADVTHFVKPGTALDAEGAARGTSVYLVDKRI 577
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP+LL ++ SL P VDR AFS+ W+L+ + ++V+ ++VIRS SYE AQ I
Sbjct: 578 DMLPMLLGTDLCSLKPYVDRFAFSVIWELDDSANIVNVNFMKSVIRSREAFSYEQAQLRI 637
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-P 465
D K ++ L G +++L ++S LK KR GAL L + +
Sbjct: 638 DDK---TQNDELTMG----------------MRALLKLSVKLKQKRLEAGALNLASPEVK 678
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP---N 522
V + E P + + N L EEFMLLAN + A I AFP +A+LRRH AP N
Sbjct: 679 VHMDSETSDPNEVEIKKLLATNSLVEEFMLLANISVARKIYDAFPQTAMLRRHAAPPSTN 738
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
L E ++ + + SS SL++ + +D Y F+ L+ +TR M A
Sbjct: 739 FEILNEM--LNTRKNMSISLESSKALADSLDRCVDP-EDPY--FNTLVRIMSTRCMMAAQ 793
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR---- 637
YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 794 YFYSGAYS-YPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYEPLSLTHRDKNK 852
Query: 638 -RMLPKNNHREGVRGRF 653
M+ +N +R+ +F
Sbjct: 853 MDMICRNINRKHRNAQF 869
>gi|293373757|ref|ZP_06620103.1| ribonuclease R [Bacteroides ovatus SD CMC 3f]
gi|292631247|gb|EFF49879.1| ribonuclease R [Bacteroides ovatus SD CMC 3f]
Length = 718
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 153/434 (35%), Positives = 228/434 (52%), Gaps = 53/434 (12%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E+
Sbjct: 197 KVTEWPDKAKNPIGQVIDILGQAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAEI 254
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G+ +
Sbjct: 255 SAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGSII 314
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 315 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVRDSRIVH 374
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K EG D + +L ++K L
Sbjct: 375 TVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKAL 413
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI--- 505
++KRF+ GA+ + + F DE G P +D N L EEFMLLANKT AE I
Sbjct: 414 REKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGCV 473
Query: 506 -----ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQA 555
A+ P R H P+ KL F ++ G ++ TS S + L+
Sbjct: 474 PKNKKAKVLP----YRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDI 529
Query: 556 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+P
Sbjct: 530 HGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRFP 577
Query: 616 DLVVHRTLNAALEA 629
D++VHR + ++
Sbjct: 578 DMMVHRLVTKYMDG 591
>gi|228470878|ref|ZP_04055723.1| ribonuclease R [Porphyromonas uenonis 60-3]
gi|228307275|gb|EEK16289.1| ribonuclease R [Porphyromonas uenonis 60-3]
Length = 725
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 159/427 (37%), Positives = 224/427 (52%), Gaps = 44/427 (10%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V I +W P VL V G+ G+ + ++ AIL E I + ++ +
Sbjct: 202 VEVAITDWPSSDKIPTGRVLKVLGKAGDNDTEMRAILTEYNIDYD-YPQAAIDEAERLSG 260
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
E+ QE+L R+D R TIDP+ A D DDALS L DG VGVHIADVSYFV G+
Sbjct: 261 EITQEQLAQREDFREVPTLTIDPADAKDFDDALSYRDLGDGRHEVGVHIADVSYFVTEGS 320
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
+D EA R TSVY++ R IPMLP +L + SL P D+ A+S L++A V I
Sbjct: 321 KIDEEAYARGTSVYLVDRTIPMLPEVLCNNLCSLRPNEDKYAYSCILTLDNAAHVQQYRI 380
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
RTVIRS +++YE AQD+I+G+ D + + I+ L+E+S+
Sbjct: 381 CRTVIRSDQRMTYEEAQDVIEGRSDTQQA---------------------IIQPLFELSQ 419
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
L+ +RF DGA++ ++ + F D G P + + L EEFMLLAN+T AE I
Sbjct: 420 QLRKRRFDDGAIKFQSQEVRFTLDPKGRPTGVEEVVDNESHHLIEEFMLLANRTVAEDIG 479
Query: 507 --RAFPDSA---LLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAR 556
RA A + R H P+ KL +F K G +++ S S F++ L+ +
Sbjct: 480 QVRAKGKKAKNFVYRVHAQPSEEKLMALASFAGKFGYKVNLSGENRQVSRSFNKLLDSVQ 539
Query: 557 EKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 616
K ++ +++ A R M A Y S D + GHY L+F YTHFTSP+RRYPD
Sbjct: 540 GKREE-----NLIETLAIRSMTRAEY--SPD-----NIGHYGLSFAFYTHFTSPIRRYPD 587
Query: 617 LVVHRTL 623
L+VHR L
Sbjct: 588 LMVHRLL 594
>gi|299144985|ref|ZP_07038053.1| ribonuclease R [Bacteroides sp. 3_1_23]
gi|298515476|gb|EFI39357.1| ribonuclease R [Bacteroides sp. 3_1_23]
Length = 718
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 153/434 (35%), Positives = 228/434 (52%), Gaps = 53/434 (12%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E+
Sbjct: 197 KVTEWPDKAKNPIGQVIDILGQAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAEI 254
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G+ +
Sbjct: 255 SAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGSII 314
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 315 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVRDSRIVH 374
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K EG D + +L ++K L
Sbjct: 375 TVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKAL 413
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI--- 505
++KRF+ GA+ + + F DE G P +D N L EEFMLLANKT AE I
Sbjct: 414 REKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGCV 473
Query: 506 -----ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQA 555
A+ P R H P+ KL F ++ G ++ TS S + L+
Sbjct: 474 PKNKKAKVLP----YRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDI 529
Query: 556 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+P
Sbjct: 530 HGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRFP 577
Query: 616 DLVVHRTLNAALEA 629
D++VHR + ++
Sbjct: 578 DMMVHRLVTKYMDG 591
>gi|374373387|ref|ZP_09631047.1| ribonuclease R [Niabella soli DSM 19437]
gi|373234360|gb|EHP54153.1| ribonuclease R [Niabella soli DSM 19437]
Length = 664
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 175/529 (33%), Positives = 254/529 (48%), Gaps = 77/529 (14%)
Query: 107 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 166
+ S Y TK G++ +++R R +G L +N+ F + G R+
Sbjct: 63 LTSGYDTKL-KGKITEVVQRG--RTEFIGSLQMNKGFGFVLGDRE--------------- 104
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
K LPD I E + + + V A++ W +E P +L
Sbjct: 105 ------------------KGLPD-IYIPEENLNGALNGQKVVAKMLRWEKEDKRPVGTIL 145
Query: 227 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFT 286
V + + L E S FS E++ +P + +++L RKD+R FT
Sbjct: 146 SVLDEAQAGDIAMKETLLEKGFPLS-FSDEAMEVANRIPDRITKDDLAKRKDVRGILTFT 204
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP A D DDA+S L +G VGVHIADVS++V PGTALD EA R+TSVY+ R
Sbjct: 205 IDPEDAKDFDDAISFRVLKNGNYEVGVHIADVSHYVTPGTALDDEAYQRATSVYLPDRVN 264
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
PMLP +S + SL P D+L FS + LN +V W+G+TVI S + +YE AQ II
Sbjct: 265 PMLPEHISNVLCSLRPNEDKLTFSAIFQLNDKAEVKQYWLGKTVIHSNRRYTYEDAQQII 324
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
+ G G D ++ +++++S+ L+ RF +GA+ +++
Sbjct: 325 E----------TGAG-----------DNAAALLTVHKLSQRLRQNRFDEGAINFNSTEVR 363
Query: 467 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALL----RRHPAPN 522
F DE G P L ++ N L EE MLLANK AE ++ ++ L R H P+
Sbjct: 364 FKLDENGVPVGITLKVSKEANQLIEELMLLANKYVAESASKVKINNKTLPFPYRIHDTPD 423
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK---DDYVLFDILINYATRPMQL 579
KL F AF +K G + D SS+ S ++ + +K ++ VL + I R M
Sbjct: 424 EEKLLPFVAFTNKFGYKFDISSAESIAASFDKLLKDIKGRPEEAVLQQLGI----RTMAK 479
Query: 580 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
A Y S + GHY L F Y HFTSP+RRYPD++VHR L LE
Sbjct: 480 AKYTSS-------NIGHYGLGFENYCHFTSPIRRYPDIMVHRILEEILE 521
>gi|153807031|ref|ZP_01959699.1| hypothetical protein BACCAC_01308 [Bacteroides caccae ATCC 43185]
gi|423219986|ref|ZP_17206482.1| ribonuclease R [Bacteroides caccae CL03T12C61]
gi|149130151|gb|EDM21361.1| ribonuclease R [Bacteroides caccae ATCC 43185]
gi|392624249|gb|EIY18342.1| ribonuclease R [Bacteroides caccae CL03T12C61]
Length = 718
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 224/424 (52%), Gaps = 45/424 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G+ GE +++AIL E + P+S+ + +P E+
Sbjct: 197 KVTEWPDKAKNPIGQVIDILGKAGENTTEMHAILAEFGLPY--VYPKSVETAADKIPAEI 254
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI +L +G+ VGVHIADV+++V G +
Sbjct: 255 SAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKEGLWEVGVHIADVTHYVKEGGII 314
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +++ G+V D I
Sbjct: 315 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFNITEKGEVKDSRIVH 374
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K EG D + +L ++K L
Sbjct: 375 TVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKAL 413
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRF+ GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 414 REKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKVGRV 473
Query: 509 FPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
+ R H P+ KL F ++ G ++ TS S + L+ K
Sbjct: 474 PKNKKAKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDIHGKK 533
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++V
Sbjct: 534 EE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRFPDMMV 581
Query: 620 HRTL 623
HR L
Sbjct: 582 HRLL 585
>gi|313206658|ref|YP_004045835.1| rnase r [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|383485963|ref|YP_005394875.1| rnase r [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|416112219|ref|ZP_11593184.1| Ribonuclease R [Riemerella anatipestifer RA-YM]
gi|442314133|ref|YP_007355436.1| hypothetical protein G148_0437 [Riemerella anatipestifer RA-CH-2]
gi|312445974|gb|ADQ82329.1| RNAse R [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|315022155|gb|EFT35184.1| Ribonuclease R [Riemerella anatipestifer RA-YM]
gi|380460648|gb|AFD56332.1| rnase r [Riemerella anatipestifer ATCC 11845 = DSM 15868]
gi|441483056|gb|AGC39742.1| hypothetical protein G148_0437 [Riemerella anatipestifer RA-CH-2]
Length = 721
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 224/430 (52%), Gaps = 35/430 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V ++ EWN P ++ V G G E +I++IL E + + F E +
Sbjct: 194 VVVKMVEWNPTEKNPHGEIVKVLGTPGSHETEIHSILAEYGLPYA-FPEEVEKEADAIDR 252
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
E+ +E+ R D+R C FTIDP A D DDALSI +L +G +GVHIADVS++V+ T
Sbjct: 253 EIRDDEVKKRWDMRGICTFTIDPKDAKDFDDALSIRKLENGNWEIGVHIADVSHYVVSNT 312
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R +PMLP +LS EV SL P D+ FS ++LN ++ +W
Sbjct: 313 LLDQEAYQRATSVYLVDRVVPMLPEVLSNEVCSLRPNEDKYTFSAVFELNDKAEIKKQWF 372
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
GRTVI S + +YE AQ+ I+ G+G D+ I +L ++K
Sbjct: 373 GRTVIHSDRRFTYEEAQERIE----------TGKG-----------DLADEILTLDRLAK 411
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
IL+++R GA+ + S+ F DE P +D N L EEFMLLAN+ +E I+
Sbjct: 412 ILREERIRKGAITFDRSEVRFNLDENNEPLGVYFKVSKDSNHLIEEFMLLANRKVSEFIS 471
Query: 507 ---RAFP--DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
+ P + + R H P+ KL F + G +++ ++S + +S+ + + +K
Sbjct: 472 LNKKGSPTGKTFIYRVHDDPDPTKLEALRDFVATFGYKMNLANSQKVAESMNELLKSVKG 531
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+++ A R M A Y GHY L F YTHFTSP+RRYPDL+ HR
Sbjct: 532 KGEE-NMIETLAMRSMSKAVYSTEP-------IGHYGLGFEYYTHFTSPIRRYPDLIAHR 583
Query: 622 TLNAALEAEK 631
L L+ K
Sbjct: 584 LLQHYLDQGK 593
>gi|78188726|ref|YP_379064.1| ribonuclease R [Chlorobium chlorochromatii CaD3]
gi|78170925|gb|ABB28021.1| RNAse R [Chlorobium chlorochromatii CaD3]
Length = 794
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 171/482 (35%), Positives = 251/482 (52%), Gaps = 56/482 (11%)
Query: 169 QLTPTHPK-YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLH 227
QL P K P++ V +K ++ ++G + EL ++ E N V+
Sbjct: 228 QLKPDDRKILPEIFVALKH-----ARKAKDGQKVLVGELDFTQLGEIN-------GKVVE 275
Query: 228 VFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTI 287
+ G G+ +++AI I + F L + V + + ++ R D+R+ +FTI
Sbjct: 276 ILGTAGDSAVEVSAIARSKGIDET-FDDALLQQVQSVSDTISEADIKDRLDIRDKVVFTI 334
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP A D DDALS+E L DG+ RVGVHIADVS++V + LD EAQ R+TSVY++ R IP
Sbjct: 335 DPIDAKDFDDALSVEMLEDGLCRVGVHIADVSHYVQENSPLDREAQKRATSVYLVDRVIP 394
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 407
MLP LSE++ SLNPGVDR+A+SIF+ L +V + +TVI S + +YE ++I+
Sbjct: 395 MLPARLSEQICSLNPGVDRMAYSIFFTLTPEAEVRNYEFHKTVIHSKRRFTYEDVEEILH 454
Query: 408 GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
GEG D ++ ++ L S IL++KRF DG L E + F
Sbjct: 455 K----------GEG-----------DYLQELQLLDRYSTILREKRFRDGGLDFETEEVRF 493
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALLRRHPAP 521
+ G P + + R + L EEFMLLAN+ A+ + + F P L R H +P
Sbjct: 494 KLGKEGEPLEVIKKERLGSHRLIEEFMLLANRKVAKHLTKTFRENRKTPLPVLYRVHGSP 553
Query: 522 NMRKLREFEAFCSKHG--LQLDTSSSGQF--HQSLEQAREKLKDDYVLFDILINYATRPM 577
K+ F + G L+++ S G QSL Q +++K V F ++ R M
Sbjct: 554 QEEKVVMVANFVKRLGYDLKINRSKEGIIVSAQSLRQLLQQVKGTNVEF-LVSELVLRCM 612
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
A Y +GD + GHY L F YTHFTSP+RRYPDL++HR L E E++ K R
Sbjct: 613 SKAVY--TGD-----NIGHYGLGFEHYTHFTSPIRRYPDLLIHRML---FEYERMRKKRR 662
Query: 638 RM 639
+M
Sbjct: 663 KM 664
>gi|443243331|ref|YP_007376556.1| ribonuclease R [Nonlabens dokdonensis DSW-6]
gi|442800730|gb|AGC76535.1| ribonuclease R [Nonlabens dokdonensis DSW-6]
Length = 732
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 226/431 (52%), Gaps = 20/431 (4%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
++V EWN++ P V + G GE + +I+AIL + + F E +
Sbjct: 187 QVVLVEFVEWNDKQDSPNGRVKDILGEPGEHDTEIHAILAQYGLPYE-FPAEVEEYTEKL 245
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
+ +E+ R+D+RN +TIDP+ A D DDALS + L +G +G+HIADVS++V
Sbjct: 246 DKSISGKEIEKRRDMRNTLTYTIDPADAKDFDDALSFKTLENGNYEIGIHIADVSHYVKE 305
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
GT LD EA R+TSVY++ R +PMLP +LS V SLNP D+L FS +++++ +
Sbjct: 306 GTVLDDEAYERATSVYLVDRVVPMLPEVLSNGVCSLNPHEDKLCFSAVFEMDNDCKIHKE 365
Query: 385 WIGRTVIRSCCKLSYEHAQDIID-GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
W GRTVI S + +YE AQ II+ GK ++ +L + +++V + L E
Sbjct: 366 WFGRTVIHSDQRFAYEEAQHIIETGKGEIPVEISLSRKQTSI-----KAEIVEATLKLDE 420
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
++K +++KR GAL + ++ F ++ P +D N L EEFMLLAN+ A
Sbjct: 421 LAKKMREKRMDSGALSFDKTEVKFNLNDAAEPVGVYFKTSKDANKLIEEFMLLANRKVAA 480
Query: 504 VIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK-- 560
I + P + R H PN KL + K G LD +SL + +K
Sbjct: 481 FIGKKQPKKTFIYRIHDEPNDEKLGALKNIVVKFGHSLDLRDRKTVTKSLNKLLSDVKGA 540
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
+ + D L A R M A Y + + GHY LAF Y+HFTSP+RRYPD++VH
Sbjct: 541 KEQNMVDTL---AIRTMSKAVYSTN-------NIGHYGLAFDYYSHFTSPIRRYPDVMVH 590
Query: 621 RTLNAALEAEK 631
R L L+ K
Sbjct: 591 RLLQHYLDGGK 601
>gi|156083040|ref|XP_001609004.1| RNB-like domain containing protein [Babesia bovis T2Bo]
gi|154796254|gb|EDO05436.1| RNB-like domain containing protein [Babesia bovis]
Length = 951
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 155/433 (35%), Positives = 231/433 (53%), Gaps = 28/433 (6%)
Query: 202 IEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCL 261
+E + + ID W+ S P H + + G ++E + IL E+ + F P++ L
Sbjct: 426 LENKRIVVVIDSWDRFSRKPSGHWVEIIGDVEDLETESAVILREHEVITREFPPKAYMEL 485
Query: 262 PCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYF 321
P W+ E++ RKD R +F++DP D+DDAL L +G V VHIADV++F
Sbjct: 486 PPADWKPGAEDIKLRKDFRKNLVFSVDPPGCKDIDDALGFSVLDNGNIEVSVHIADVTHF 545
Query: 322 VLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV 381
V G+ +D EA R T+VY++ R+ MLP LL+ + SL P DRL FS+ W + ++
Sbjct: 546 VKAGSFIDKEASKRCTTVYLVDRRTDMLPSLLTTNLCSLVPNEDRLCFSVVWQFDRNNEI 605
Query: 382 VDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSL 441
VD + +IRS +Y+ AQD+ID S+ + E ++K L
Sbjct: 606 VDTQFYKGIIRSSRAFTYKDAQDLIDAG----GSDNITE----------------ALKGL 645
Query: 442 YEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGREDLNFLFEEFMLLANK 499
++KIL+ KRF GA+ LE+ + F ++ + VL D N + EEFMLLAN
Sbjct: 646 DNIAKILRAKRFESGAVELESPEVKFEYELTDVRKMQKYVLY---DTNRMVEEFMLLANV 702
Query: 500 TAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 559
+ A I FP SALLRRHP P +L+ + S+HG++ + +S + SL++ +
Sbjct: 703 SVATKIFERFPTSALLRRHPPPVDERLKVLQRSLSQHGIEFEFGNSRDLNLSLKRLVQ-- 760
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
D L L TR M A Y SG+ T + HY L+ +YTHFTSP+RRY D++V
Sbjct: 761 SGDPRLGSALRIMTTRCMSQAVYCHSGE-AGVTSFKHYGLSSELYTHFTSPIRRYADVIV 819
Query: 620 HRTLNAALEAEKL 632
HR L AAL+ E +
Sbjct: 820 HRMLAAALDIEAM 832
>gi|295668038|ref|XP_002794568.1| mitotic control protein dis3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285984|gb|EEH41550.1| mitotic control protein dis3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1036
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 188/530 (35%), Positives = 264/530 (49%), Gaps = 68/530 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV I++R+ W Y G K + ++ S ++ + + P
Sbjct: 379 QPTARVVGIVKRN--------------WRQYVGNIDKISTAAQAK-SGRRQQTVFVIPMD 423
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG---- 230
+ PK+ + + + +R + +D W+ +S +P H + G
Sbjct: 424 KRIPKIRIRTRQAQELFGQR------------ILVTVDAWDRDSRYPTGHFVRSLGELET 471
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQEE----LLSRKDLRNFCI 284
+G E E A+L E + F L CLP W+VPQ RKDLR +
Sbjct: 472 KGAETE----ALLLEYDVQYRPFPQIVLDCLPPEGHNWKVPQNMDDPGWHDRKDLRELLV 527
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
+IDP D+DDAL L +G VGVHIADVS+FV P T +D EA +R T+VY++ +
Sbjct: 528 CSIDPPGCQDIDDALHARPLPNGNIEVGVHIADVSHFVKPNTPMDTEASMRGTTVYLVDK 587
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
+I MLP+LL ++ SL P V R AFS W++ + +VV ++VI S SYE AQ
Sbjct: 588 RIDMLPMLLGTDLCSLKPHVQRYAFSTIWEMTPSAEVVSSTCTKSVIFSREAFSYEQAQL 647
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
ID D+ ++ L E S+++L ++SK+LK KR GAL L + +
Sbjct: 648 RID---DISKTDELTE----------------SMRTLLKLSKLLKQKRMDAGALNLASPE 688
Query: 465 PVFLFD-EYGTPYDSVLS-GREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
D E P V + + N L EEFMLLAN T A I +AFP +A+LRRH P
Sbjct: 689 VRIETDSELSDPVTDVKTKALLETNSLVEEFMLLANITVASKIFKAFPQTAMLRRHATPP 748
Query: 523 MRKLREFEAFCS-KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLA 580
E A S K + LD SSS SL+ + F+ LI ATR M A
Sbjct: 749 PSNFEELIAQLSKKRNMTLDVSSSLALATSLDHCVDPANP---FFNTLIRILATRCMTSA 805
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
YFC+G ++++ HY LA P+YTHFTSP+RRY DLVVHR L AA+ E
Sbjct: 806 EYFCAGAHA-ESEFRHYGLASPIYTHFTSPIRRYADLVVHRQLAAAIGYE 854
>gi|375254472|ref|YP_005013639.1| ribonuclease R [Tannerella forsythia ATCC 43037]
gi|363406269|gb|AEW19955.1| ribonuclease R [Tannerella forsythia ATCC 43037]
Length = 732
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 228/424 (53%), Gaps = 45/424 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS-CLPCVPWEV 268
RI EW E + P V+ + G+ G+ +++AIL E + + PE + +P E+
Sbjct: 212 RIIEWPEGAKNPLGEVIDILGKAGDNNTEMHAILAEFGLPYT--YPEKVEEAANRIPTEI 269
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
E+ R+D R FTIDP A D DDALS+ +L +G+ VGVHIADV+++V PG+ +
Sbjct: 270 TDEDRAGREDFRGVVTFTIDPKDAKDFDDALSLRKLENGLWEVGVHIADVTHYVKPGSII 329
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA R+TSVY++ R IPMLP L + SL P ++L FS+ +++N +++ IGR
Sbjct: 330 DKEAYERATSVYLVDRTIPMLPESLCNNLCSLRPNEEKLTFSVIFEMNDEAEILASRIGR 389
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
T+I S + +YE AQ++I+ GQ ++ D + +L+ +++ L
Sbjct: 390 TIIESDRRFTYEEAQNVIET------------------GQGDYKD---EVLTLHHLAQQL 428
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR- 507
++ RF G++ + + F DE G P + ++ N L EEFML+AN+ AE + +
Sbjct: 429 RNIRFASGSIDFDRYEVKFEIDEKGKPLNVYFKESKEANKLIEEFMLIANRAVAESMGKQ 488
Query: 508 ---AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQ-----FHQSLEQAREKL 559
+ + R H P+ K++ F F + G +L T S + L++A+ K
Sbjct: 489 PKGKTKKTFVYRVHEQPDPEKMKNFAGFIRRFGYKLKTDGSKSELTKGINNLLDKAQGKP 548
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ A R MQ A Y + GHY LAFP Y+HFTSP+RRYPD++
Sbjct: 549 EE-----NLIETLAIRSMQKARYSTE-------NIGHYGLAFPYYSHFTSPIRRYPDMMA 596
Query: 620 HRTL 623
HR L
Sbjct: 597 HRLL 600
>gi|340617688|ref|YP_004736141.1| ribonuclease r [Zobellia galactanivorans]
gi|339732485|emb|CAZ95753.1| Ribonuclease R [Zobellia galactanivorans]
Length = 731
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 219/432 (50%), Gaps = 30/432 (6%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V + + W + P + V G+ GE +I+AIL E + F E +
Sbjct: 191 VVVKFESWPDGDDSPTGKITEVLGKPGEHNTEIHAILAEYGLPYD-FPEEVEHFADKIDT 249
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+ +EE+ R+D+R+ FTIDP A D DDALS E L +G +G+HIADVS+++ P T
Sbjct: 250 SIKEEEIAKRRDMRDTLTFTIDPKDAKDFDDALSFEVLENGNYEIGIHIADVSHYLEPDT 309
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R +PMLP +LS SL P ++ FS ++++ + ++W
Sbjct: 310 ILDDEAYERATSVYLVDRVVPMLPEVLSNNACSLRPNEEKYTFSAIFEIDKKAQIKNQWF 369
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGW-PQLYGQFEWS-----DVVRSIKS 440
GRTVI S + +YE AQ II+ GEG P+ E + DVV++
Sbjct: 370 GRTVINSNERFAYEEAQHIIE----------TGEGHIPEDISIREEAYSVSDDVVKATLE 419
Query: 441 LYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKT 500
+ ++KI++DKR GA+ + + F +E P +D N L EEFMLLAN+
Sbjct: 420 MDRLAKIMRDKRMQQGAISFDKVEVRFNLNENSEPIGVFFKESKDANKLIEEFMLLANRK 479
Query: 501 AAEVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ--ARE 557
AE I + P + R H P+ KL S+ G ++D SL Q +
Sbjct: 480 VAEFIGKQKPKKTFVYRIHDDPDEDKLIALNGLISRFGHKIDFQDKKSISASLNQLLSDV 539
Query: 558 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
K K + L D L R M A Y + GHY LAF YTHFTSP+RRYPD+
Sbjct: 540 KGKKEQNLVDTL---TIRSMSKAIYTTQ-------NIGHYGLAFDYYTHFTSPIRRYPDV 589
Query: 618 VVHRTLNAALEA 629
+VHR L L+
Sbjct: 590 MVHRLLQHYLDG 601
>gi|386321357|ref|YP_006017519.1| Exoribonuclease R [Riemerella anatipestifer RA-GD]
gi|325335900|gb|ADZ12174.1| Exoribonuclease R [Riemerella anatipestifer RA-GD]
Length = 695
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/430 (35%), Positives = 224/430 (52%), Gaps = 35/430 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V ++ EWN P ++ V G G E +I++IL E + + F E +
Sbjct: 168 VVVKMVEWNPTEKNPHGEIVKVLGTPGSHETEIHSILAEYGLPYA-FPEEVEKEADAIDR 226
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
E+ +E+ R D+R C FTIDP A D DDALSI +L +G +GVHIADVS++V+ T
Sbjct: 227 EIRDDEVKKRWDMRGICTFTIDPKDAKDFDDALSIRKLENGNWEIGVHIADVSHYVVSNT 286
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R +PMLP +LS EV SL P D+ FS ++LN ++ +W
Sbjct: 287 LLDQEAYQRATSVYLVDRVVPMLPEVLSNEVCSLRPNEDKYTFSAVFELNDKAEIKKQWF 346
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
GRTVI S + +YE AQ+ I+ G+G D+ I +L ++K
Sbjct: 347 GRTVIHSDRRFTYEEAQERIE----------TGKG-----------DLADEILTLDRLAK 385
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
IL+++R GA+ + S+ F DE P +D N L EEFMLLAN+ +E I+
Sbjct: 386 ILREERIRKGAITFDRSEVRFNLDENNEPLGVYFKVSKDSNHLIEEFMLLANRKVSEFIS 445
Query: 507 ---RAFP--DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
+ P + + R H P+ KL F + G +++ ++S + +S+ + + +K
Sbjct: 446 LNKKGSPTGKTFIYRVHDDPDPTKLEALRDFVATFGYKMNLANSQKVAESMNELLKSVKG 505
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+++ A R M A Y GHY L F YTHFTSP+RRYPDL+ HR
Sbjct: 506 KGEE-NMIETLAMRSMSKAVYSTEP-------IGHYGLGFEYYTHFTSPIRRYPDLIAHR 557
Query: 622 TLNAALEAEK 631
L L+ K
Sbjct: 558 LLQHYLDQGK 567
>gi|427385040|ref|ZP_18881545.1| ribonuclease R [Bacteroides oleiciplenus YIT 12058]
gi|425727208|gb|EKU90068.1| ribonuclease R [Bacteroides oleiciplenus YIT 12058]
Length = 713
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/430 (35%), Positives = 224/430 (52%), Gaps = 45/430 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G+ G+ +++AIL E + P S+ +P E+
Sbjct: 194 KVVEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPASVEKAADKIPAEI 251
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI +L +G+ VGVHIADVS++V G +
Sbjct: 252 SDEEIAKREDFRGVTTFTIDPKDAKDFDDALSIRKLKEGLWEVGVHIADVSHYVTEGGII 311
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S+ +D+N GDV + +
Sbjct: 312 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAYSVIFDINEKGDVKNARVVH 371
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI+S + +YE AQ II+ K EG D + L ++K L
Sbjct: 372 TVIKSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLMLDTIAKAL 410
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
+ KRF GA+ + + F D+ G P +D N L EEFMLLAN+T AE I R
Sbjct: 411 RQKRFVAGAINFDRYEVKFEIDDKGKPISVYFKESKDANKLVEEFMLLANRTVAEKIGRV 470
Query: 509 ----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
P R H P+ KL F ++ G +L TS S + L+ + K
Sbjct: 471 PKNKKPKVFPYRIHDLPDPEKLDNLAQFIARFGYKLRTSGTKTDVSKSINHLLDDIQGKK 530
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++V
Sbjct: 531 EE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDMMV 578
Query: 620 HRTLNAALEA 629
HR L L+
Sbjct: 579 HRLLTKYLDG 588
>gi|340386056|ref|XP_003391524.1| PREDICTED: DIS3-like exonuclease 1-like, partial [Amphimedon
queenslandica]
Length = 524
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 182/517 (35%), Positives = 261/517 (50%), Gaps = 41/517 (7%)
Query: 110 SYPTKRPTGRVVSIIERSPRRDGIVGF-LNVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 168
SY + RPTGRVV I RS R D I F + Q K S +K +
Sbjct: 41 SYDSPRPTGRVVGIWSRSDR-DIIASFPVKFKQRRCLKNVSSDKMRK------------V 87
Query: 169 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
+ P PK+ I RL ++ + R D+W+ S +P H +
Sbjct: 88 LVVPYDIGIPKI---------RINTRLSN---ELKHHRIVVRFDDWDINSHYPNGHFVRS 135
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTI 287
G G+ E +I AIL EN + S F+ LS LP W++ EEL R+DLR+ I++I
Sbjct: 136 IGPIGDTETEIQAILIENELSTSSFTQSILSELPDGDSWKIEDEELRKRRDLRSHLIYSI 195
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP D+DDALS++ L GI +GVHIADVSYFV G+ D EA+ RST+VY+ R+
Sbjct: 196 DPKGCEDVDDALSVKSLRRGIE-LGVHIADVSYFVRSGSYTDREAKERSTTVYLADRRYD 254
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 407
MLP +LS + SL VDR A S+ L+ ++ W GRT+IRS KL+YE AQD+ +
Sbjct: 255 MLPAVLSSNLCSLLSNVDRYAVSVICTLDPHYEIKSIWYGRTIIRSAYKLTYEVAQDLFE 314
Query: 408 GKFDVESSNTLGE------GWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
K D + + E P+L + S++ SIK L E++++L++KR +GAL LE
Sbjct: 315 DKDDEYMISLIPELSESKLTPPELAEKV--SELRHSIKKLVEIARVLREKRNRNGALELE 372
Query: 462 NSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
+ + D + ++++ E M+ AN+ A I+ P ALLR H AP
Sbjct: 373 GVEVKIQMTDKDNIDDIIPKKPQEIHETVAECMIFANEWVARKISHQLPSKALLRSHGAP 432
Query: 522 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 581
+ S G + TSS+ + QSL+ A ++ D + +L AT+ M A
Sbjct: 433 PQDMFSSLKECASARGYVIKTSSNLKLAQSLDNAVDEF--DPEVNKVLRMLATQSMIQAL 490
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
Y +G + HY L YTHFTSP+RRY DL+
Sbjct: 491 YTSTG---SNHKLSHYGLGIECYTHFTSPIRRYADLL 524
>gi|221057578|ref|XP_002261297.1| mitotic control protein dis3 homologue [Plasmodium knowlesi strain
H]
gi|194247302|emb|CAQ40702.1| mitotic control protein dis3 homologue,putative [Plasmodium
knowlesi strain H]
Length = 992
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 158/442 (35%), Positives = 229/442 (51%), Gaps = 40/442 (9%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V ID W+ S +P L V G +VE + I E I FS + CLP W
Sbjct: 451 VIVVIDRWDYNSKYPLGRCLSVLGICDDVETETKLIYNEYNISTKEFSESAYKCLPPSDW 510
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDG-ISRVGVHIADVSYFVLPG 325
+P++E R+D R+ F+IDP D+DDALS++ L + I VGVHIADVSYFV
Sbjct: 511 VIPEDEYYKRRDFRDVLTFSIDPPGCEDIDDALSVQVLEEQQIIEVGVHIADVSYFVKQN 570
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
+ALD+EA R T+VY++ +++ MLP LL+ ++ SL G DRL +S + + ++ D
Sbjct: 571 SALDLEASKRCTTVYLINQRVEMLPKLLTTDLCSLVEGQDRLTYSCIFTFDMNYEIRDIN 630
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 445
I + +IRS SYE AQ++ID + D S +++ L ++
Sbjct: 631 INKCIIRSNKSFSYEEAQNMIDDRKDC-------------------SRTAEALRLLNNIA 671
Query: 446 KILKDKRFTDGALRLE-NSKPVFLFDEYG-------TPYDSVLSGREDLNFLFEEFMLLA 497
K LK K +GAL L NS+ +F F+ PY S D N L E FMLLA
Sbjct: 672 KYLKKKWLNEGALELRGNSEVLFEFESNDFSKTKNLKPYVSY-----DTNKLIEAFMLLA 726
Query: 498 NKTAAEVIARAFPDSALLRRHPAP---NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 554
N++ A +I + F + +LRRHP P N+++L ++ + H + TS + S+
Sbjct: 727 NRSVARIIYQGFKAACVLRRHPPPKNENLKELNDYLESINIHDFKYGTSKELSY--SINN 784
Query: 555 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 614
LKDD VL +IL T+ M A + + ++ HY LA +YT FTSP+RRY
Sbjct: 785 IN--LKDDKVLSNILKILITKCMNEAVFISGYNVHNNEMLRHYGLAADIYTFFTSPIRRY 842
Query: 615 PDLVVHRTLNAALEAEKLYWKH 636
D++VHR LN E L K+
Sbjct: 843 ADIMVHRVLNHIYGIEVLDKKY 864
>gi|357114234|ref|XP_003558905.1| PREDICTED: exosome complex exonuclease RRP44-like isoform 2
[Brachypodium distachyon]
Length = 896
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 201/694 (28%), Positives = 307/694 (44%), Gaps = 152/694 (21%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RP GR+V II+R+ W +Y GS + S V ++
Sbjct: 338 RPVGRIVGIIKRN--------------WNSY-CGSLEPMPMPAGSGGVAHALFVS---KD 379
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ PK+ + + L + + KR + +D W+ S +P H +
Sbjct: 380 RRIPKIRIQTRQLGNLLNKR------------IVVAVDSWDVLSRYPSGHYV-------- 419
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 292
+L EN I FS + L+CLP +PW + ++L + R+DLR+ +F++DP
Sbjct: 420 -------VLIENDINTRPFSTQVLACLPPLPWSLSPDDLANPNRQDLRHVRVFSVDPP-- 470
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
IADV+ FVLPGT LD EA R+TSVY++ ++I MLP
Sbjct: 471 ---------------------DIADVTNFVLPGTPLDEEASQRATSVYLVGQRIDMLPKP 509
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
L+E+V SL V+RLAFS+ W++ D++ ++VI+SC +SY AQ +D V
Sbjct: 510 LTEDVCSLRADVERLAFSVIWEMTPDADIISSRYTKSVIKSCAAMSYVEAQARMDDSRLV 569
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
+ + +++L ++KI++++R GAL L +++ F D E
Sbjct: 570 DP-------------------LTVDLRNLNSLAKIMRNRRCERGALTLASAEVKFEIDSE 610
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + + N + EEFML AN + AE I + +P +LLRRHP+P L
Sbjct: 611 THDPLDIGIYQIREANQMIEEFMLAANVSVAEKILKHYPLCSLLRRHPSPTKEMLEPLLR 670
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
S GL LD SSS SL+ A+ +DD ++ ATR M A YFCSGD
Sbjct: 671 TASSVGLNLDVSSSKALADSLDNAK---RDDPYFNKLIRILATRCMTQAVYFCSGDLS-L 726
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRG 651
+++ HY LA +YTHFTSP+RRY D+VVHR L AAL+ K
Sbjct: 727 SEYYHYGLASALYTHFTSPIRRYADVVVHRLLAAALDIAK-------------------- 766
Query: 652 RFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVK 711
L +F D L +A + N R + A V+
Sbjct: 767 --LPPVFQDGPQ------------------------LTGIADNLNYRHRNAQMASRASVE 800
Query: 712 LYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTLV 771
L+ I + + V +EAR++ + +++ K IE IY +W+
Sbjct: 801 LHTLIYFRTRPV-DTEARIVKIKANGFIVFVPKFGIEGPIYLTAKGDKGADWVVDE---- 855
Query: 772 LSLCAHKRSFKRGGPGNYRALEEVAL---VVRPN 802
H++ K G +Y L+ V + VV P
Sbjct: 856 ----VHQKVTKPGANISYAVLQSVMIHMEVVEPQ 885
>gi|397586419|gb|EJK53608.1| hypothetical protein THAOC_26924, partial [Thalassiosira oceanica]
Length = 752
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 213/383 (55%), Gaps = 20/383 (5%)
Query: 251 SGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISR 310
SGF L+CLP +++ E R DLR+ + +IDP D+DDAL L +G +
Sbjct: 215 SGFV---LACLPPADYKIELEP--GRTDLRHLPVLSIDPPGCKDIDDALHCIELPNGNWQ 269
Query: 311 VGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFS 370
VGVHIADV+++V GTA+D+EA RSTS Y++ R++ MLP LL+ ++ SL VDR AF+
Sbjct: 270 VGVHIADVTHYVEAGTAIDLEAADRSTSTYLVNRRLDMLPSLLTTDLCSLKGNVDRFAFT 329
Query: 371 IFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFE 430
+ W++ ++V +++I S L+Y+ AQ +ID G+G ++
Sbjct: 330 VLWEVTPDAEIVGVDFVKSIIHSIAALTYQQAQSLID-----RPDGAGGDGDVEIQAG-- 382
Query: 431 WSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFL 489
++K L ++++ + +R GAL L + + F+ D E P D + N L
Sbjct: 383 ------AVKRLARLARLFRKRRIDAGALTLASPEVKFVLDSESLNPTDVQAYTLYEANAL 436
Query: 490 FEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFH 549
EEFMLLAN T A+ I R +P ++LRRHPAPN + G+ L S +
Sbjct: 437 VEEFMLLANVTVAKKILRHYPTLSILRRHPAPNRSMFDGLISKARTRGVSLCIDDSKKLA 496
Query: 550 QSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
SL+ A + DD L +L +TR M A YFCSG++ DW HY LA PVYTHFTS
Sbjct: 497 DSLDAAGRAMSDDPYLDKLLRVLSTRCMSPAQYFCSGEYS-AKDWHHYGLAAPVYTHFTS 555
Query: 610 PLRRYPDLVVHRTLNAALEAEKL 632
P+RRY D+ VHR L +A+ + L
Sbjct: 556 PIRRYADVCVHRLLASAIGVQPL 578
>gi|363750039|ref|XP_003645237.1| hypothetical protein Ecym_2715 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888870|gb|AET38420.1| Hypothetical protein Ecym_2715 [Eremothecium cymbalariae
DBVPG#7215]
Length = 988
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 168/476 (35%), Positives = 249/476 (52%), Gaps = 45/476 (9%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
++++ K LP I+ R + +V + +D W +P H + G + +
Sbjct: 412 VILMDKCLP-KIRIRTRRAKELLNKRIVVS-LDSWPATYRYPLGHFVRELGEIESAQAET 469
Query: 240 NAILYENAICCSGFSPESLSCLPCV--PWEVP----------QEELLS-RKDLRNFCIFT 286
++L E+ + FS + L CLP W+ P ++ LL+ R+D+R+ I +
Sbjct: 470 ESLLLEHDVEYRPFSKKVLECLPSEGHDWKAPVDLQDADAIAKDPLLAKRRDMRDKLICS 529
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP D+DDAL ++L +G VGVHIADV++FV P TALD E R+TSVY++ ++I
Sbjct: 530 IDPPGCVDIDDALHAKKLINGNWEVGVHIADVTHFVKPNTALDAEGASRATSVYLVDKRI 589
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP+LL ++ SL VDR AFS+ W+L++ ++V ++VIRS SYE AQ I
Sbjct: 590 DMLPMLLGTDLCSLKASVDRFAFSVIWELDNDANIVSVEFTKSVIRSREAFSYEQAQLRI 649
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-P 465
D D ++ L G +++L ++SK LK KR GAL L + +
Sbjct: 650 D---DPNQNDELTLG----------------MRALLQLSKKLKQKRLDAGALNLASPEVK 690
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP---N 522
V + E P + + N L EEFMLLAN + A I +FP +A+LRRH AP N
Sbjct: 691 VHMDSETSDPSEVEIKKLLSTNSLVEEFMLLANISVARKIYDSFPQTAMLRRHAAPPSTN 750
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
L E + + + SS SL++ + D V F+ L+ +TR M A
Sbjct: 751 FESLNEM--LQVRKNMSISLESSKALADSLDRC---VDSDDVYFNTLVRIMSTRCMMAAQ 805
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
YF SG + +D+ HY LA +YTHFTSP+RRY D++ HR L AA+ E L HR
Sbjct: 806 YFYSGAYS-YSDFRHYGLAVDIYTHFTSPIRRYCDIIAHRQLAAAIGYESLDLSHR 860
>gi|254572349|ref|XP_002493284.1| Catalytic component of the exosome, involved in RNA processing and
degradation [Komagataella pastoris GS115]
gi|238033082|emb|CAY71105.1| Catalytic component of the exosome, involved in RNA processing and
degradation [Komagataella pastoris GS115]
gi|328352699|emb|CCA39097.1| exosome complex exonuclease DIS3/RRP44 [Komagataella pastoris CBS
7435]
Length = 958
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 176/486 (36%), Positives = 261/486 (53%), Gaps = 44/486 (9%)
Query: 185 KDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILY 244
K +P +++ + + + + M +V A ID+W S P+ H + G + + + A+L
Sbjct: 394 KSMP-AVRIKTRKANDLLNMRIVVA-IDDWPGTSKHPEGHFVRTLGPIEDKDTEQEALLL 451
Query: 245 ENAICCSGFSPESLSCLPCV--PWEVP-----QEELLSRKDLRNFCIFTIDPSTATDLDD 297
E+ + FS L CLP W VP E+L R+DLR+ + +IDP D+DD
Sbjct: 452 EHDVEYRPFSKNVLDCLPKEGHEWIVPVDLSSDEQLKKRRDLRDKLVCSIDPPGCVDIDD 511
Query: 298 ALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEV 357
AL +L +G VGVHIADV++FV P TALD E RSTSVY++ ++I MLP LL ++
Sbjct: 512 ALHARKLPNGNFEVGVHIADVTHFVKPATALDQEGASRSTSVYLVDKRIDMLPTLLGTDL 571
Query: 358 GSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNT 417
SL P VDR +FS+ W+L+ ++++ +++I+S SY+ AQD ID +SSN
Sbjct: 572 CSLKPYVDRFSFSVIWELDEDANIINVDFMKSIIKSREAFSYQDAQDRID-----DSSNN 626
Query: 418 LGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPY 476
++ + ++SL +SK LK KR GAL L + + V + E P
Sbjct: 627 --------------DELTQGMRSLLALSKKLKKKRMDAGALNLSSPEVKVHMDSETSDPG 672
Query: 477 DSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRKLREFEAFC 533
+ + D N L EEFMLLAN + A I AFP A+LRRH P+ N L E
Sbjct: 673 EVEIKKLLDTNSLVEEFMLLANISVARKIYDAFPQIAMLRRHAPPPSTNFEALNEM--LH 730
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDT 592
+ G+ + +S SL++ +K D+Y F+ L+ ATR M A YF SG+F
Sbjct: 731 IRKGMTISVENSRALSDSLDRCVDK-NDEY--FNTLVRIMATRCMMAAEYFVSGNFS-YQ 786
Query: 593 DWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR-----RMLPKNNHRE 647
++ HY LA +YTHFTSP+RRY D++ HR L AA+ E L+ R ++ KN +R
Sbjct: 787 EFKHYGLAADIYTHFTSPIRRYCDVLAHRQLAAAIGYEPLHPIQRDKTKMDLIVKNMNRR 846
Query: 648 GVRGRF 653
+F
Sbjct: 847 HRNAQF 852
>gi|329962724|ref|ZP_08300647.1| ribonuclease R [Bacteroides fluxus YIT 12057]
gi|328529558|gb|EGF56461.1| ribonuclease R [Bacteroides fluxus YIT 12057]
Length = 715
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 225/430 (52%), Gaps = 45/430 (10%)
Query: 209 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 267
+I EW +++ P V+ + GR G+ +++AIL E + P ++ +P E
Sbjct: 194 VKIVEWPDKAKNPIGQVIDILGRAGDNTTEMHAILAEFGLPY--VYPSAVEKAADKIPDE 251
Query: 268 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 327
+P EE+ R+D RN FTIDP A D DDALSI RL D + VGVHIADV+++V G
Sbjct: 252 IPAEEIARREDFRNVTTFTIDPKDAKDFDDALSIRRLKDNLWEVGVHIADVTHYVKEGGI 311
Query: 328 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 387
+D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S+ +++ G++ +
Sbjct: 312 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFEMTEKGEIKHSRVV 371
Query: 388 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 447
TVI+S + +YE AQDII+ G+G D I L +KI
Sbjct: 372 HTVIKSNRRFTYEEAQDIIE----------TGKG-----------DFKEEILQLDRFAKI 410
Query: 448 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 507
L+D RF GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 411 LRDNRFKAGAINFDRYEVKFEIDEKGKPVSVYFKVSKDANKLVEEFMLLANRTVAEKIGR 470
Query: 508 A--FPDSALL--RRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 558
+ +L R H P+ KL F ++ G +L T S + L+ + K
Sbjct: 471 VPKGKKAKVLPYRIHDLPDPEKLDNLAQFIARFGYKLRTGGTKTDISKSINHLLDDIQGK 530
Query: 559 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++
Sbjct: 531 KEE-----NLIETVSIRAMQKARYSVH-------NVGHYGLAFDYYTHFTSPIRRFPDMM 578
Query: 619 VHRTLNAALE 628
VHR L L+
Sbjct: 579 VHRLLTKYLD 588
>gi|33518898|gb|AAQ20089.1| S1 self-incompatibility locus-linked pollen G211 protein [Petunia
integrifolia subsp. inflata]
Length = 259
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/257 (57%), Positives = 183/257 (71%)
Query: 623 LNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGV 682
L A +EAE+LY K R++ +N + R TG+ +KDA S E +EAL AA K+ V
Sbjct: 2 LAATVEAEELYLKCRKLSLQNGEGQLTCERCFTGVCLNKDAIGSPEAQEALLAAASKHKV 61
Query: 683 PCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYI 742
PCA+ L VA HCN+RKLA R+VKDA KLYMW+LLKKK++LLS+ARVLALGPRFMT+YI
Sbjct: 62 PCAERLAGVAAHCNERKLASRHVKDATEKLYMWVLLKKKKILLSDARVLALGPRFMTLYI 121
Query: 743 EKLAIERRIYYDEVEGLIVEWLETTSTLVLSLCAHKRSFKRGGPGNYRALEEVALVVRPN 802
KLAIERRIYYDEVEGLIVEWL+ TSTLVLS +KR +RG PG RAL+EVA +V P
Sbjct: 122 HKLAIERRIYYDEVEGLIVEWLDCTSTLVLSPSVNKRFNRRGSPGKCRALDEVAFIVNPC 181
Query: 803 DLKEEHGMFGGSVNKCFTTDANAKRQCSGSSSNSGVDPGVFPLTIPLLSTIPVALNAIGG 862
L +E + + + N S +S V+P VFP+T+ LLSTIPVAL+A GG
Sbjct: 182 KLNQEPVVCEQRDTRNNRSLPNGDISRSCNSDVKKVEPAVFPMTLRLLSTIPVALHADGG 241
Query: 863 GDGPLEIGVRLYMSSYM 879
GDGPLEIGVRL++SSY
Sbjct: 242 GDGPLEIGVRLFVSSYF 258
>gi|393244997|gb|EJD52508.1| RNB-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 983
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/452 (36%), Positives = 228/452 (50%), Gaps = 35/452 (7%)
Query: 194 RLEEGDA-TIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 252
RL G A ++ + + ID W S +P+ H + G E + ++L E +
Sbjct: 417 RLRTGQAPSLLGQKILVAIDRWEPTSKYPEGHFVRALGTVESKEAETESLLLEFDVPYRP 476
Query: 253 FSPESLSCLPCV--PWEVP-----QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS 305
F L+CLP W VP + E R+DLR + +IDP D+DDAL L
Sbjct: 477 FGKAILNCLPPEGDTWVVPPKDSARPEWRDREDLRELLVCSIDPPKCQDIDDALHARPLP 536
Query: 306 DGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVD 365
+G GVHIADVS+FVLP +D EA R T+VY++ ++I MLP LL + SL P V+
Sbjct: 537 NGNIEAGVHIADVSHFVLPDNPMDSEAAARGTTVYLVDKRIDMLPSLLGTNLCSLRPHVE 596
Query: 366 RLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQL 425
RLAFS+ W+L++ ++V ++VI S +YE AQ D P +
Sbjct: 597 RLAFSVIWELDTNAEIVKVRFTKSVIASKQAFTYEEAQIWKDD--------------PNM 642
Query: 426 YGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGR 483
D+ +SI+ L ++ LK KR GAL L + + D E P D
Sbjct: 643 Q-----DDLTKSIRLLNSLAIKLKAKRMAAGALNLASPEVKIHMDSAESSDPVDVEQKEL 697
Query: 484 EDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH-PAPNMRKLREFEAFCSKHGLQLDT 542
+ N L EEFMLLAN + A FP A+LRRH P P + + + G+ LD
Sbjct: 698 RETNSLVEEFMLLANISVAAKNQETFPQIAVLRRHLPPPKASFEKLQDVLMKRRGMTLDV 757
Query: 543 SSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAF 601
SSSG QSL++ + F+ L+ ATR M A YF SG DT +GHY LA
Sbjct: 758 SSSGALAQSLDKC---IDPKEPAFNTLVRIMATRCMLPAEYFVSGSVPRDT-FGHYGLAS 813
Query: 602 PVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
P+YTHFTSP+RRY D++ HR L A++ L+
Sbjct: 814 PIYTHFTSPIRRYADVLAHRQLAASIGYSSLH 845
>gi|358333592|dbj|GAA52077.1| DIS3-like exonuclease 1 [Clonorchis sinensis]
Length = 1067
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 188/581 (32%), Positives = 280/581 (48%), Gaps = 88/581 (15%)
Query: 200 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 259
AT+ E RID W+ S +P H +H G G++E + +L E+ + FS L
Sbjct: 298 ATLAKERFVVRIDSWDAGSNYPHGHFVHSLGPIGDLETETQTLLIEHNLPIRAFSDAQLR 357
Query: 260 CLPCV----PWEVPQEELLSRKDLR-----------NFCIFTIDPSTATDLDDALSIERL 304
L PW+V E+ R+DLR + IF+IDP D+DD LS+ L
Sbjct: 358 ELSPYSVQRPWKVDPAEVARRRDLRSPAVSGNPASEDVLIFSIDPQGCQDVDDTLSVRWL 417
Query: 305 -----SDGIS----RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DG + ++GVHIADV++FV PG +D EA+ R+TSVY+ R+ MLP LLS
Sbjct: 418 DPIVMEDGSTHRRLQLGVHIADVTFFVPPGGFVDAEARRRTTSVYLADRRYDMLPGLLSG 477
Query: 356 EVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIID---GKFD 411
++ SL GVDR A S+ W+L+ ++ DV+D W GRTVIRS KL+YE AQ I D K D
Sbjct: 478 DLCSLWSGVDRYAVSVLWELDMNSFDVLDVWYGRTVIRSAYKLTYEVAQQIYDTPVTKND 537
Query: 412 VESSNT--------------LGEGWPQLYG---QFEWSDVVR---SIKSLYEVSKILKDK 451
+ + LGE P+L G + +++V+ SI+ L +V+ ++ +
Sbjct: 538 TAAGASHAEQLLAKMGGPEKLGELIPELKGLKKDRQLAELVKLESSIRLLVDVASAVRTR 597
Query: 452 RFTDGALRLENSKPVFLF----DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 507
R G L L++ + F G D V +++ E M+ AN A
Sbjct: 598 RVARGGLELDSIEIGVRFANPETRSGKLEDLVPKEPLEMHGTVAELMIFANHWVARRCLE 657
Query: 508 AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFD 567
+PD + LRRHP P E + + G QLD S+ SL +A + +D +
Sbjct: 658 TYPDRSCLRRHPPPRPEFFDELQRCAASRGFQLDIESNRSLGASLAKADD--PNDPEVKR 715
Query: 568 ILINYATRPMQLASYFCSG-DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 626
+L+ TR M A YF +G D + HY LA +YTHFTSP+RRY D++VHR L A
Sbjct: 716 VLLQLTTRAMTNALYFSTGVDNLTREQFAHYGLALNLYTHFTSPIRRYADVLVHRVLLTA 775
Query: 627 LEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREAL------SVAALKY 680
L + R + GR A+ + GR A +V ++
Sbjct: 776 L---------------GDCRSAISGR-----------ADEVLGRSAKPPHLNPTVFGPEH 809
Query: 681 GVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKK 721
+P + L + H N++ A + V+ A V+L+ + K +
Sbjct: 810 LMPSEE-LSEICQHMNEQHWAAQQVQRASVELFQALFFKDR 849
>gi|322708538|gb|EFZ00115.1| mitotic control protein dis3 [Metarhizium anisopliae ARSEF 23]
Length = 928
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 194/570 (34%), Positives = 271/570 (47%), Gaps = 59/570 (10%)
Query: 73 NYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDG 132
N + T D + VS ++ +R + SS +PT +VV +I+R+
Sbjct: 277 NITKNENADTEDRNDFVSDKERKALQEEAKR-THKSSSESQLQPTAKVVGVIKRN----- 330
Query: 133 IVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIK 192
W Y G + +S ++ + L P K PK+ + + + + +
Sbjct: 331 ---------WRQYVGHIDPSSASKSASSQGRKQDSVFLIPMDKKIPKIRLRTRQVSELLG 381
Query: 193 KRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 252
KRL LV ID W +S P H + G + A+L E +
Sbjct: 382 KRL----------LVT--IDAWERDSRHPVGHFVRSLGELETKAAETEALLLEWDVQYRP 429
Query: 253 FSPESLSCLPC------VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 306
F L CLP VP V R+DLR I +IDP D+DDAL +L +
Sbjct: 430 FPKTVLDCLPKEGHDWRVPASVEDPGWRDREDLRGLLICSIDPVGCQDIDDALHARKLPN 489
Query: 307 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 366
G VGVHIADVS+FV P A+D EA +R T+VY++ ++I MLP LL ++ SL P V+R
Sbjct: 490 GNVEVGVHIADVSHFVKPANAMDTEASIRGTTVYLVDKRIDMLPPLLGTDLCSLKPYVER 549
Query: 367 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY 426
AFS+ W+LN D+V ++VI+S SYE AQ ID D + L G
Sbjct: 550 YAFSVLWELNDNADIVSVRFTKSVIKSREAFSYEQAQLRID---DTSQQDDLTNG----- 601
Query: 427 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGRED 485
++ L ++SK LK KR GAL L + + V + E P D D
Sbjct: 602 -----------MRMLLKLSKKLKKKRMDAGALSLSSPEVKVQMESETSDPIDVKTKELLD 650
Query: 486 LNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSS 544
N L EEFML AN + A I AFP +A+LRRH AP E + K G +L T +
Sbjct: 651 TNSLVEEFMLFANISVAAKIYDAFPQTAILRRHAAPPKTNFDELADQLRVKRGFELRTDT 710
Query: 545 SGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPV 603
S SL+ +K D + F+ L+ ATR M A YFCSG + ++ HY LA +
Sbjct: 711 SKALADSLDACVDK-SDPF--FNTLVRIMATRCMMSAEYFCSGT-QAYPEFRHYGLASEI 766
Query: 604 YTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
YTHFTSP+RRY DL+ HR L AA+ E ++
Sbjct: 767 YTHFTSPIRRYADLLAHRQLAAAIGYEAVH 796
>gi|340517369|gb|EGR47613.1| predicted protein [Trichoderma reesei QM6a]
Length = 985
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 272/556 (48%), Gaps = 72/556 (12%)
Query: 87 EKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYK 146
E+V +Q+ G N ++ PT +VV +++R+ R+ VG ++ +
Sbjct: 361 EEVKRTQKATGENQLQ-------------PTAKVVGVVKRNWRQ--YVGHIDPSTASKAP 405
Query: 147 GGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMEL 206
R+ + + L P K PK+ + + + + + KRL L
Sbjct: 406 SQGRR-------------LDSVFLIPMDKKIPKIRLRTRQVSELLGKRL----------L 442
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV-- 264
V +D W+ +S P H++ G A+L E + F L CLP
Sbjct: 443 VT--VDSWDRDSRHPVGHLVRSLGELETKAAATEALLLEWDVQYRPFPKTVLDCLPKEGH 500
Query: 265 PWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 320
W VP+ + R+DLR+ I +IDP D+DDAL L +G VGVHIADVS+
Sbjct: 501 DWRVPESKEDPGWRDREDLRDLLICSIDPPGCQDIDDALHARLLPNGNYEVGVHIADVSH 560
Query: 321 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGD 380
FV P A+D EA +R T+VY++ ++I MLP+LL ++ SL P V+R AF++ W+L+ D
Sbjct: 561 FVKPANAMDTEASIRGTTVYLVDKRIDMLPMLLGTDLCSLKPYVERFAFTVIWELDENAD 620
Query: 381 VVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKS 440
+V+ ++VI+S SYE AQ ID + D+ + ++
Sbjct: 621 IVNVRFTKSVIKSREAFSYEQAQLRIDDA-------------------SQQDDLTKGMRM 661
Query: 441 LYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANK 499
L +SK LK KR GAL L + + V + E P D D N L EEFML AN
Sbjct: 662 LLMLSKKLKKKRMDAGALSLSSPEIKVHMESESSDPIDVKTKELLDTNSLVEEFMLFANV 721
Query: 500 TAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
+ A I AFP +A+LRRH AP E + K GL+L T SS SL++ +
Sbjct: 722 SVAAKIYEAFPQTAILRRHAAPPKTNFDELADQLRIKRGLELRTDSSKALADSLDKCVDP 781
Query: 559 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
+ F+ L+ ATR M A YFCSG + ++ HY LA +YTHFTSP+RRY DL
Sbjct: 782 KEP---FFNTLVRIMATRCMMSAEYFCSGT-QAYPEFRHYGLASEIYTHFTSPIRRYADL 837
Query: 618 VVHRTLNAALEAEKLY 633
+ HR L AA+ E ++
Sbjct: 838 LAHRQLAAAIGYEAVH 853
>gi|429328280|gb|AFZ80040.1| hypothetical protein BEWA_028900 [Babesia equi]
Length = 892
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/442 (35%), Positives = 228/442 (51%), Gaps = 39/442 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
+ D W+ S P H + + G + + + IL E+ + F E+ LP W
Sbjct: 363 IVVNFDSWDRFSKRPSGHWVEILGPIDDRDVESAVILKEHQVKTEDFPLEAYKELPEQDW 422
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
++P +E R D C+F++DP D+DDAL +RL DG VHIADV+YFV PG+
Sbjct: 423 KIPDDERAKRMDYTKACLFSVDPPGCKDIDDALGFKRLKDGSMEFSVHIADVTYFVKPGS 482
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R T+VY++ R+ MLP LL+ ++ SL P +RLAFS+ +N +G +++
Sbjct: 483 HLDQEASERCTTVYLVDRRTDMLPSLLTTDLCSLVPERERLAFSVICRMNESGAILETKF 542
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
G++VIRS +Y+ AQD+ID + E S L K + ++K
Sbjct: 543 GKSVIRSVRAFTYKEAQDLIDANGNDEISVAL--------------------KEMNAMAK 582
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGR-EDLNFLFEEFMLLANKTAAEVI 505
L++ RF GA+ L +S F FD +V S + D N + EEFMLLAN A I
Sbjct: 583 KLREMRFKRGAIELGSSDVKFEFD--AVTVSNVESYKIYDTNKMIEEFMLLANVMVASKI 640
Query: 506 ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDT-SSSGQFHQSLEQAREKLKDDYV 564
+FP S LLRRHP P +L + + + G+ + +S + ++SL++ + KD
Sbjct: 641 HASFPKSCLLRRHPPPAEERLEDLKRLLEEKGINFFSFGNSKELNESLQKLTKFPKDFLN 700
Query: 565 LFDILINYATRPMQ-----------LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
IL TR M A Y S D + + + HY L +YTHFTSP+RR
Sbjct: 701 AAQIL---TTRCMSQVGHLPSPHSPQAIYINSSDLELEQ-FKHYGLCTDLYTHFTSPIRR 756
Query: 614 YPDLVVHRTLNAALEAEKLYWK 635
Y D+VVHR L A LE E + W+
Sbjct: 757 YADVVVHRLLAACLEIESMDWR 778
>gi|262405839|ref|ZP_06082389.1| ribonuclease R [Bacteroides sp. 2_1_22]
gi|294647800|ref|ZP_06725352.1| ribonuclease R [Bacteroides ovatus SD CC 2a]
gi|345510350|ref|ZP_08789918.1| ribonuclease R [Bacteroides sp. D1]
gi|229443054|gb|EEO48845.1| ribonuclease R [Bacteroides sp. D1]
gi|262356714|gb|EEZ05804.1| ribonuclease R [Bacteroides sp. 2_1_22]
gi|292636708|gb|EFF55174.1| ribonuclease R [Bacteroides ovatus SD CC 2a]
Length = 718
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 227/434 (52%), Gaps = 53/434 (12%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P ++ + G+ G+ +++AIL E + P+++ + +P E+
Sbjct: 197 KVTEWPDKAKNPIGQIIDILGQAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAEI 254
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G +
Sbjct: 255 SAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGGII 314
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G++ D I
Sbjct: 315 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEIKDSRIVH 374
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K EG D + +L ++K L
Sbjct: 375 TVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKAL 413
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI--- 505
++KRF+ GA+ + + F DE G P +D N L EEFMLLANKT AE I
Sbjct: 414 REKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGCV 473
Query: 506 -----ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQA 555
A+ P R H P+ KL F ++ G ++ TS S + L+
Sbjct: 474 PKNKKAKVLP----YRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDI 529
Query: 556 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+P
Sbjct: 530 HGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRFP 577
Query: 616 DLVVHRTLNAALEA 629
D++VHR + ++
Sbjct: 578 DMMVHRLVTKYMDG 591
>gi|395217105|ref|ZP_10401519.1| exoribonuclease II [Pontibacter sp. BAB1700]
gi|394455128|gb|EJF09666.1| exoribonuclease II [Pontibacter sp. BAB1700]
Length = 752
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 174/522 (33%), Positives = 261/522 (50%), Gaps = 77/522 (14%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
R G VV ++ERS R +VG + +++ F + VPD + +
Sbjct: 170 RAEGIVVEVLERS--RTELVGIMELSKNFGF---------------VVPDFKKL------ 206
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEE-SPFPQAHVLHVFGRGG 233
Y + V ++L + E GD V +I EW +E P V+ VFG G
Sbjct: 207 --YFDVFVGERNLNGA-----EAGDK------VLVKIVEWPKEPGKNPTGEVIRVFGPAG 253
Query: 234 EVEPQINAILYENAICCSGFSPESLSC-LPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
E E +I++I+ E + PE++ + ++P E+ R+D+R+ FTIDP+ A
Sbjct: 254 EHEAEIHSIMAEFGLPFE--FPEAVEEEANQISDKIPAGEIAKRRDMRDVTTFTIDPADA 311
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D DDALSI++L +G +GVHIADV+++V P + L+ EA R+TSVY++ R IPMLP
Sbjct: 312 KDFDDALSIQKLENGNWEIGVHIADVTHYVHPRSLLEKEAFHRATSVYLVDRTIPMLPER 371
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS + SL P ++ FS+ ++++ G + D W GRTV S + +YE AQ+ I+
Sbjct: 372 LSNGLCSLRPNEEKFTFSVVFEIDDNGKLYDTWYGRTVTYSDRRFAYEEAQERIE----- 426
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
GEG D I L ++K L+ KRF +GA+ E ++ F DE
Sbjct: 427 -----TGEG-----------DFAEEINVLNNIAKKLQAKRFKNGAISFETTEVKFKLDEN 470
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI-----ARAFPDSALLRRHPAPNMRKLR 527
G P + R+D + L EEFMLLANK AE + + P + + R H +P+ KL
Sbjct: 471 GKPLSIYVKERKDAHKLIEEFMLLANKKVAEFVYNKGKGKKRP-TMVYRTHGSPDPDKLN 529
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 587
F F K G ++D G + L +++ +L N A R M A Y +
Sbjct: 530 TFSVFARKFGYKVD--PDGDISEELNNLTHEIEGKPEQ-SVLQNLAIRTMAKAKYSTEPE 586
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
GH+ LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 587 -------GHFGLAFDHYSHFTSPIRRYPDMMAHRLLQHYLDG 621
>gi|294806194|ref|ZP_06765041.1| ribonuclease R [Bacteroides xylanisolvens SD CC 1b]
gi|294446450|gb|EFG15070.1| ribonuclease R [Bacteroides xylanisolvens SD CC 1b]
Length = 703
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 227/434 (52%), Gaps = 53/434 (12%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P ++ + G+ G+ +++AIL E + P+++ + +P E+
Sbjct: 182 KVTEWPDKAKNPIGQIIDILGQAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAEI 239
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G +
Sbjct: 240 SAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGGII 299
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G++ D I
Sbjct: 300 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEIKDSRIVH 359
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K EG D + +L ++K L
Sbjct: 360 TVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKAL 398
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI--- 505
++KRF+ GA+ + + F DE G P +D N L EEFMLLANKT AE I
Sbjct: 399 REKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGCV 458
Query: 506 -----ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQA 555
A+ P R H P+ KL F ++ G ++ TS S + L+
Sbjct: 459 PKNKKAKVLP----YRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDI 514
Query: 556 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+P
Sbjct: 515 HGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRFP 562
Query: 616 DLVVHRTLNAALEA 629
D++VHR + ++
Sbjct: 563 DMMVHRLVTKYMDG 576
>gi|328872026|gb|EGG20396.1| Putative mitotic control protein [Dictyostelium fasciculatum]
Length = 1261
Score = 247 bits (630), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 157/471 (33%), Positives = 243/471 (51%), Gaps = 39/471 (8%)
Query: 167 YIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVL 226
++ + P + P + V K + KR + RID W+ S +P H +
Sbjct: 463 FVNVVPLDSRIPIIRVATKSAEAFVNKR------------IIVRIDRWDLSSSYPAGHYV 510
Query: 227 HVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV-PWEVPQEELLSRKDLRN--FC 283
G G +E ++ ++ E+ I +S + L LP W +P++E R+ + +
Sbjct: 511 SSVGERGSLETELGCLMVEHDISLRPWSKQILDSLPTSDTWSIPKDERKKRRIMADSGHR 570
Query: 284 IFTIDPSTATDLDDALSIERLS-DGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
+ +IDP + D+DD +S+ RL D + +GVHIADV++FV G+ LDIEAQ R T++Y+
Sbjct: 571 VMSIDPLGSKDIDDTISLARLDGDRVIEIGVHIADVTHFVAKGSPLDIEAQRRGTTIYLP 630
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW--DLNSAGD---VVDRWIGRTVIRSCCKL 397
R+ MLP +LSE++ SL G +R A S+ W +L++ +VD W G+T+I SC +
Sbjct: 631 DRRFDMLPAVLSEDLCSLWGGKERCAMSVVWRMELDATTQEYKIVDSWFGKTIINSCGEF 690
Query: 398 SYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGA 457
Y+ AQDIIDGK + G+ DV K+ +++ ++R GA
Sbjct: 691 HYQLAQDIIDGKV--------------VDGKDRDEDVTNGGKNAGYRNRLHNNRRELAGA 736
Query: 458 LRLENSKPVFLFDE-YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 516
L LE+ + F F+E TP VL +++ L E+M+LAN I + P +ALLR
Sbjct: 737 LDLESIEVRFTFNESTKTPDRIVLKSDLEVHSLVAEYMILANAAVGTRIHQYHPGAALLR 796
Query: 517 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRP 576
RHP PN + G D+SS+ + +SL+ A + D + I+
Sbjct: 797 RHPPPNQLGFSNIQQLFDMFGFPFDSSSNSRLAESLKNA--VVPGDPLANQIIKLKTVNV 854
Query: 577 MQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
+ A YF +G F D D+ HY LA YTHFTSP+RRY D++VHR L A+
Sbjct: 855 VSEAVYFSTGGFNVD-DFYHYGLALNKYTHFTSPIRRYADIIVHRQLMDAV 904
>gi|340620788|ref|YP_004739239.1| VacB protein-like protein [Capnocytophaga canimorsus Cc5]
gi|339901053|gb|AEK22132.1| VacB protein-like protein [Capnocytophaga canimorsus Cc5]
Length = 737
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 172/526 (32%), Positives = 255/526 (48%), Gaps = 62/526 (11%)
Query: 118 GRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT-HPK 176
G V IIER R VG + + + F + + PT H
Sbjct: 137 GEVTKIIERKKMR--FVGVVQMQKNFAF------------------------VLPTDHRM 170
Query: 177 YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVE 236
Y + V D+ + E GD I RI++W +S P + + G+ GE
Sbjct: 171 YTDIFVSKNDINGA-----ENGDKVI------VRIEKWEGKSNSPFGVIEQILGKPGEQS 219
Query: 237 PQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLD 296
++++IL E + F E + + + +EE+ R+D+RN FTIDP A D D
Sbjct: 220 TEMHSILAEYGLPYE-FPHEVEAFAKQLDTSITEEEIAKRRDMRNVLTFTIDPKDAKDFD 278
Query: 297 DALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEE 356
DALS + L +G +GVHIADVS++V GT LD EA R+TSVY++ R +PMLP +LS
Sbjct: 279 DALSFQILENGNYEIGVHIADVSHYVQEGTILDEEAYNRATSVYLVDRVVPMLPEVLSNF 338
Query: 357 VGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG-------- 408
SL P ++ FS +++N ++++ W GRTV S + +YE AQ+II+
Sbjct: 339 ACSLRPNEEKYTFSAVFEMNKKAEILNTWFGRTVTLSDHRFAYEEAQEIIENFAGVGEKQ 398
Query: 409 -KFDVESSNTLGEGWPQLYGQFEW-SDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
K ++ E + G + +VV++I + +++K L+ KR GA+ + +
Sbjct: 399 EKVEISDFQMPSEISIRKEGSYSVPKEVVQAILLMDDLAKKLRIKRMRLGAISFDKIEVK 458
Query: 467 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
F DE P +D N L EEFMLLAN+ AE IA+ + + R H P+ KL
Sbjct: 459 FHLDENDNPTHVYFKESKDANKLIEEFMLLANRKVAEFIAKQ-KKTFVYRVHDEPDDEKL 517
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFC 584
+ S+ G ++ SL E++ K + L D L A R M ASY
Sbjct: 518 MQLNGVISRFGYGINMKDRKSITHSLNSLLEEVKGKKEQNLVDTL---AIRSMAKASYST 574
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
+ GHY LAF YTHFTSP+RRYPD++VHR L L+ +
Sbjct: 575 E-------NIGHYGLAFDFYTHFTSPIRRYPDVMVHRLLQKYLDNQ 613
>gi|255693553|ref|ZP_05417228.1| ribonuclease R [Bacteroides finegoldii DSM 17565]
gi|260620618|gb|EEX43489.1| ribonuclease R [Bacteroides finegoldii DSM 17565]
Length = 718
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 223/428 (52%), Gaps = 41/428 (9%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
+I EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E+
Sbjct: 197 KITEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAEI 254
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI + +G+ VGVHIADV+++V G +
Sbjct: 255 TPEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRSIKNGLWEVGVHIADVTHYVKEGGII 314
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G++ D I
Sbjct: 315 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEIKDSRIAH 374
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K EG D + L ++K L
Sbjct: 375 TVINSDRRFTYEEAQQIIETK----------EG-----------DYKEEVLMLDTIAKAL 413
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRF GA+ + + F DE G P +D N L EEFMLLANKT AE I R
Sbjct: 414 REKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGRV 473
Query: 509 ----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDY- 563
P R H P+ KL F ++ G ++ TS + + ++ L DD
Sbjct: 474 PKNKKPKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTSGT---KTDISKSINHLLDDIH 530
Query: 564 --VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++VHR
Sbjct: 531 GKKEENLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDMMVHR 583
Query: 622 TLNAALEA 629
+ ++
Sbjct: 584 LVTKYMDG 591
>gi|115450491|ref|NP_001048846.1| Os03g0129200 [Oryza sativa Japonica Group]
gi|23306125|gb|AAN17392.1| Putative mitotic control protein dis3 [Oryza sativa Japonica Group]
gi|108705992|gb|ABF93787.1| RNB-like protein, expressed [Oryza sativa Japonica Group]
gi|113547317|dbj|BAF10760.1| Os03g0129200 [Oryza sativa Japonica Group]
Length = 896
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 209/695 (30%), Positives = 309/695 (44%), Gaps = 154/695 (22%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RP GRVV II+R+ W +Y GS + S V ++
Sbjct: 338 RPVGRVVGIIKRN--------------WNSY-CGSLEPMPMPAGSGGVAHALFVS---KD 379
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ PK+ + + L + + KR+ +VA +D W+ S +P H +
Sbjct: 380 RRIPKIRIQTRQLGNLLDKRI----------IVA--VDSWDVLSRYPSGHYV-------- 419
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 292
+L EN I FS + L+CLP +PW + E+L + R+DLR+ +F++DP
Sbjct: 420 -------VLIENDINTRPFSTQVLACLPPLPWTLSPEDLANPNRQDLRHVRVFSVDPPD- 471
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
IADV+ FV PGT LD EA R TSVY++ ++I MLP
Sbjct: 472 ----------------------IADVTNFVHPGTPLDEEASQRGTSVYLVGQRIDMLPKP 509
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
L+E+V SL V+RLAFS+ W++ D++ ++VI+SC +SY AQ +D V
Sbjct: 510 LTEDVCSLRADVERLAFSVIWEMTPHADIISTRYTKSVIKSCAAMSYVEAQARMDDSRLV 569
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
+ + +++L ++KI++ +R GAL L +++ F D E
Sbjct: 570 DP-------------------LTVDLRNLNSLAKIMRHRRCERGALTLASAEVKFEIDSE 610
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + + N + EEFML AN + AE I + FP +LLRRHP+P L
Sbjct: 611 THDPLDIGIYQIREANQMIEEFMLAANISVAEKILKHFPLCSLLRRHPSPTKEMLEPLLR 670
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
S GL LD SSS +SL+ A K+D F+ LI ATR M A YFCSGD
Sbjct: 671 TASSVGLNLDVSSSKALAESLDNA----KNDDPYFNKLIRILATRCMTQAVYFCSGDLT- 725
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVR 650
+++ HY LA +YTHFTSP+RRY D++VHR L AALE K
Sbjct: 726 FSEYYHYGLAASLYTHFTSPIRRYADVIVHRLLAAALEIAK------------------- 766
Query: 651 GRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACV 710
L +F D L VA + N R + A V
Sbjct: 767 ---LPPLFQDGPQ------------------------LTGVADNLNYRHRNAQMASRASV 799
Query: 711 KLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIVEWLETTSTL 770
+L+ I + + + +EAR++ + +++ K IE IY +W+
Sbjct: 800 ELHTLIYFRTRR-MDTEARIVKIKANGFIVFVPKFGIEGPIYLTPKGDKGGDWVVDE--- 855
Query: 771 VLSLCAHKRSFKRGGPGNYRALEEVAL---VVRPN 802
H+R K G +Y L+ V + VV P
Sbjct: 856 -----VHQRVTKPGTNVSYAVLQTVMIHMEVVEPQ 885
>gi|58267012|ref|XP_570662.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134111352|ref|XP_775592.1| hypothetical protein CNBD5470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258254|gb|EAL20945.1| hypothetical protein CNBD5470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226895|gb|AAW43355.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1002
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 183/538 (34%), Positives = 258/538 (47%), Gaps = 79/538 (14%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL----- 170
PTGRVV I++R+ W Y +RSSLS D + L
Sbjct: 382 PTGRVVGIVKRN--------------WRAYV------CHLDRSSLS--DSAFTSLAQQTV 419
Query: 171 --TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
TP P++ + + P + ++ + ID W+ S +P H +
Sbjct: 420 FATPLSRALPRIRLRTRQAPQLVDQK------------ILVTIDNWSPTSRYPDGHFVRA 467
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEEL-----LSRKDLRN 281
G+ E + ++L E + F L+CLP W VP++++ R+DLR+
Sbjct: 468 LGKVASKEAEQESLLLEYEVPYRPFGKAILNCLPAEGDNWVVPKKDMECLEWRDREDLRD 527
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL RL +G GVHIADVS+FV P +D EA R T+VY+
Sbjct: 528 LDICSIDPPGCQDIDDALHARRLPNGNIEAGVHIADVSHFVHPDNPMDSEAASRGTTVYL 587
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ ++I MLP LL + SL P V+RLAFS+ W+LN +VVD ++VI S +YE
Sbjct: 588 VDKRIDMLPSLLGTNLCSLRPFVERLAFSVIWELNQDAEVVDVRFVKSVISSKEAFTYEA 647
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ D K S N + SI+ L ++ LKD R GAL L
Sbjct: 648 AQLRKDDK----SMN---------------DPLTNSIRLLNHLAIKLKDARMRAGALSLS 688
Query: 462 NS--KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH- 518
+ K E P + + N L EEFMLLAN A+ I FP +A+LRRH
Sbjct: 689 SPELKIHLASSESAEPINVEQKKLLETNSLVEEFMLLANIWVAKKIQEVFPATAVLRRHS 748
Query: 519 --PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATR 575
P N L++ + G+ LD S+S SL+ + + F+ L+ ATR
Sbjct: 749 PPPKTNFEVLQDI--LMKRKGITLDVSTSKALADSLDACVIAGEPE---FNTLVRIMATR 803
Query: 576 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
M A YFCSG ++ +GHY LA P+YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 804 CMLSAEYFCSGSVSKES-YGHYGLASPIYTHFTSPIRRYADVLAHRQLAAAINYTPLH 860
>gi|408673906|ref|YP_006873654.1| ribonuclease R [Emticicia oligotrophica DSM 17448]
gi|387855530|gb|AFK03627.1| ribonuclease R [Emticicia oligotrophica DSM 17448]
Length = 792
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 172/530 (32%), Positives = 250/530 (47%), Gaps = 69/530 (13%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
P G ++ IIER R IVG + + NY +L PD + + P
Sbjct: 133 PEGAIIEIIERG--RKEIVG--KIQTFGNY-------------ALVHPDHKNLHDDIFVP 175
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
K D IK + +LV RI + V+ + G+ GE
Sbjct: 176 K------------DKIK-------GATKDDLVIVRILTYPTNVQQGTGEVIEILGKSGEN 216
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
+++AIL E + F + + +EE+ R+D RN FTIDP A D
Sbjct: 217 NAEMHAILAEFGLPIR-FDKAIEEEAAAISEVITEEEIKKRRDFRNILTFTIDPHDAKDF 275
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS L + +GVHIADV+++V GT L+ EA R+TSVY++ R IPMLP LS
Sbjct: 276 DDALSFRVLENHNFEIGVHIADVTHYVREGTRLEEEAYNRATSVYLVDRTIPMLPEKLSN 335
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+ SL P D+L FS +++ G V+ W GRT+I S + +YE AQ++++
Sbjct: 336 NLCSLRPNEDKLTFSAVFEMTHDGRVISEWFGRTIIHSDKRFTYEEAQEVLE-------- 387
Query: 416 NTLGEGWPQLYGQFEWSDVVR-SIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT 474
N G+ + E + R + +L ++KILK +RF +GA+ E ++ F DE G
Sbjct: 388 NEEGDVLNPITEPNEILEKYRFPLHTLNHLAKILKKERFRNGAINFETNEVKFKLDETGK 447
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR---------------AFPDSALLRRHP 519
P VL R+D + L EEFMLLANK AE + + + + R H
Sbjct: 448 PLGVVLKIRKDAHKLIEEFMLLANKKVAEFVFKLGGKKQGKQSEESQTQHSTTMVYRVHE 507
Query: 520 APNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQL 579
PN KL+ F F + G + T S S+ + +++ V ++L A R M
Sbjct: 508 PPNPEKLQNFANFAGRFGFSIRTDSDKSLSNSMNKMMSEVEGTPVQ-NVLEQLAVRTMSK 566
Query: 580 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
A Y GH+ LAF Y+HFTSP+RRYPD++ HR L+ L A
Sbjct: 567 ARYTTES-------LGHFGLAFDHYSHFTSPIRRYPDMMAHRLLHHYLTA 609
>gi|399022619|ref|ZP_10724691.1| ribonuclease R [Chryseobacterium sp. CF314]
gi|398084455|gb|EJL75140.1| ribonuclease R [Chryseobacterium sp. CF314]
Length = 716
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 221/431 (51%), Gaps = 37/431 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V ++ EW P+ ++ V G GE E +I++IL E + F E +
Sbjct: 193 VIVKMTEWKPGDKNPEGEIIQVLGAPGEHETEIHSILAEYGLPYQ-FPEEVEKDADKIDR 251
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+ EE+ R D+R FTIDP A D DDALSI +L +G +GVHIADVS++V+PGT
Sbjct: 252 RITDEEVAKRWDMREITTFTIDPKDAKDFDDALSIRKLENGNWEIGVHIADVSHYVIPGT 311
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R +PMLP +LS +V SL P D+ FS ++LN +V +W
Sbjct: 312 LLDDEAYDRATSVYLVDRVVPMLPEVLSNDVCSLRPNEDKYTFSAVFELNDNAEVQKQWF 371
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
GRTVI S + +YE AQ+ I+ K EG D I L ++K
Sbjct: 372 GRTVIHSDRRFTYEEAQERIETK----------EG-----------DYAEEILVLDRLAK 410
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
I++ +R GA+ + S+ F DE P +D N L EEFMLLAN+ +E ++
Sbjct: 411 IMRAERIRKGAITFDRSEVRFSLDENNEPVGVYFKISKDSNHLIEEFMLLANRKVSEFVS 470
Query: 507 -----RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
++ + R H P+ KL F S G ++D +++ + +SL + +K
Sbjct: 471 LSRRGEISNNTFIYRVHDDPDPAKLEALRDFVSTFGYKMDLANTKKVAESLNRLLHDVKG 530
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTD-WGHYALAFPVYTHFTSPLRRYPDLVVH 620
+++ A R M A Y TD GHY L F Y+HFTSP+RRYPDL+ H
Sbjct: 531 KGEE-NMIETLAMRSMSKAVY--------STDPIGHYGLGFEYYSHFTSPIRRYPDLIAH 581
Query: 621 RTLNAALEAEK 631
R L L+ K
Sbjct: 582 RLLQHYLDGGK 592
>gi|50552065|ref|XP_503507.1| YALI0E03630p [Yarrowia lipolytica]
gi|49649376|emb|CAG79086.1| YALI0E03630p [Yarrowia lipolytica CLIB122]
Length = 986
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 264/550 (48%), Gaps = 71/550 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT RVV II+RS W Y G + I
Sbjct: 376 QPTARVVGIIKRS--------------WRYYVG-------------HIAPGSIIDDVSRG 408
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
P+ + ++ K LP ++ R + A +V A +D W +S P+ H G
Sbjct: 409 PRSVLVALMDKTLP-RVRIRTRQAAALQGRRIVVA-VDSWPADSRHPEGHFCRDLGPIES 466
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPC--VPWEVPQEEL----------LSRKDLRNF 282
+ + A+L E+ + F+ L CLP W+VPQ+ + R+DLR+
Sbjct: 467 KQAETEALLLEHDVEYRPFTKAVLDCLPAEGPDWKVPQDLVKEAAEKDPLVAKRRDLRHL 526
Query: 283 CIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYML 342
I +IDP D+DDAL L +G +GVHIADV++FV P TALD E R TSVY++
Sbjct: 527 NICSIDPPGCQDIDDALHARVLPNGNYELGVHIADVTHFVKPDTALDQEGASRGTSVYLV 586
Query: 343 QRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHA 402
++I MLP+LL + S+NP V+R AFS+ W++ G +V+ +++I S SY A
Sbjct: 587 DKRIDMLPMLLGTNLCSINPYVERYAFSVLWEMTPDGKIVNTDFTKSIISSREAFSYAEA 646
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
Q ID D ++ L EG ++ L + SK LK R GAL L +
Sbjct: 647 QARID---DPSKTDELTEG----------------MRVLLKFSKQLKQGRIDAGALNLAS 687
Query: 463 SK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
+ V + E P + + + N L EEFMLLAN + A+ I +FP +A+LRRH AP
Sbjct: 688 PEVKVHIDSETSDPGEVEVKELLETNSLVEEFMLLANTSVAKKIYESFPQTAMLRRHGAP 747
Query: 522 NMRKLREF-EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQL 579
+ + G+ + SS SL++ + + F+ L+ ATR M
Sbjct: 748 PATNFETLNDQLRTIKGMSISLESSKALADSLDKC---IDPNEPFFNTLVRIVATRSMLA 804
Query: 580 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRM 639
A YF SG + ++ HY LA +YTHFTSP+RRY D+V HR L AA+ E L+ HR
Sbjct: 805 AEYFSSGSYA-YPEFRHYGLASEIYTHFTSPIRRYADVVAHRQLAAAIGYEPLHQSHR-- 861
Query: 640 LPKNNHREGV 649
+ +H E +
Sbjct: 862 --EKDHMESI 869
>gi|375012907|ref|YP_004989895.1| ribonuclease R [Owenweeksia hongkongensis DSM 17368]
gi|359348831|gb|AEV33250.1| ribonuclease R [Owenweeksia hongkongensis DSM 17368]
Length = 715
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 167/522 (31%), Positives = 251/522 (48%), Gaps = 71/522 (13%)
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 172
K+P G V IIER+ + VG + +++ + + L P
Sbjct: 131 NKKPEGEVAEIIERA--KTEFVGIIEMSKNYGF------------------------LVP 164
Query: 173 THPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRG 232
+ K + + K+L + K GD I A+I +W E + P V V GR
Sbjct: 165 DNKKMLVDLYIHKELLNGAK----HGDKAI------AKITDWPEHASSPFGEVTEVLGRP 214
Query: 233 GEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
G+ +I++IL E + F + V E+ +EE+ R+D R+ FTIDP A
Sbjct: 215 GDHNVEIHSILAEYGLPRE-FPKLVENEAAKVAEEISKEEIAKRRDFRDVLTFTIDPHDA 273
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D DDALS+ +L +G +GVHIADV+++V PG+ L+ EA R+TSVY++ R +PMLP
Sbjct: 274 KDFDDALSLRKLENGNWEIGVHIADVTHYVTPGSELEEEAVKRATSVYLVDRVVPMLPEK 333
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS +V SL P ++L FS ++++ +V++ W GRTVI S + +Y AQ++I+
Sbjct: 334 LSNKVCSLRPHEEKLTFSAVFEMDENANVLNEWFGRTVIYSDHRFAYADAQEVIET---- 389
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
TL E + G ++KIL+ +R GAL + + F DE
Sbjct: 390 -GKGTLAEEILIMNG----------------LAKILRQQRMKSGALAFDKVEVKFELDEE 432
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA-----FPDSALLRRHPAPNMRKLR 527
P +D N L EEFMLLANK+ A I + + + R H P +L
Sbjct: 433 NNPTGVYFKESKDANHLIEEFMLLANKSVARFIGKGKNGKPSDKTFVYRIHDEPKPDRLM 492
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 587
+ F + G Q+DT + +SL + +K +++ R M A Y
Sbjct: 493 DLSNFVKQFGYQVDTKNRNGISRSLNKMLSDVKGKGEA-NMIETLTIRSMAKAVYSTQ-- 549
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
+ GHY LAF YTHFTSP+RRYPD++VHR L L+
Sbjct: 550 -----NIGHYGLAFDYYTHFTSPIRRYPDMMVHRLLQHYLDG 586
>gi|296005540|ref|XP_001350300.2| mitotic control protein dis3 homologue, putative [Plasmodium
falciparum 3D7]
gi|225632034|emb|CAD52709.2| mitotic control protein dis3 homologue, putative [Plasmodium
falciparum 3D7]
Length = 1073
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 156/449 (34%), Positives = 227/449 (50%), Gaps = 38/449 (8%)
Query: 200 ATIEMEL----VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
A +E EL V ID W+ S P + V G ++E + I E I FS
Sbjct: 515 AQLEDELRNKRVIVTIDNWDIYSRNPLGRCISVLGNCDDIETETKLIYNEYNISTREFSE 574
Query: 256 ESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS-DG------I 308
CLP W +P EE R D RN F+IDP D+DDALS+E L DG I
Sbjct: 575 NVYKCLPPNNWVIPDEEYEKRNDFRNVLTFSIDPPGCQDIDDALSVEFLQQDGNIEKNYI 634
Query: 309 SRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 368
R+GVHIADVSYFV + +D+EA R T+VY++ +++ MLP LL+ + SL G +RL
Sbjct: 635 YRIGVHIADVSYFVKQNSPIDLEASKRCTTVYLINQRVDMLPKLLTTNLCSLVEGEERLT 694
Query: 369 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 428
+S + N D++D + + +I+S SYE AQ++ID K D
Sbjct: 695 YSCIFCFNKDFDIIDISVKKCIIKSNKSFSYEQAQNVIDDKND----------------- 737
Query: 429 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGR----E 484
SD +S++ L +++K LK K DGAL L + V LF+ + + +
Sbjct: 738 --QSDTAKSLRLLNKIAKHLKQKWSNDGALELRGNTEV-LFEFEANDFSKAKNLKPYVCY 794
Query: 485 DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSK-HGLQLDTS 543
+ N L E FMLLAN++ A +I + F +++LRRHP P L+E + +
Sbjct: 795 ETNKLIEAFMLLANRSVARIIFQNFKAASVLRRHPPPKHEYLKELNDYLKTIQVFDFKYN 854
Query: 544 SSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPV 603
+S S+ LK+D +L +IL T+ M A + + ++ HY LA +
Sbjct: 855 TSKDLSHSINNIN--LKNDNILSNILKVMVTKCMNEAVFISGYNVHNNDMLRHYGLAADI 912
Query: 604 YTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
YT FTSP+RRY D++VHR LN + E+L
Sbjct: 913 YTFFTSPIRRYADIMVHRILNHIYQIEEL 941
>gi|89889727|ref|ZP_01201238.1| ribonuclease R [Flavobacteria bacterium BBFL7]
gi|89518000|gb|EAS20656.1| ribonuclease R [Flavobacteria bacterium BBFL7]
Length = 732
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 154/440 (35%), Positives = 232/440 (52%), Gaps = 29/440 (6%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
++V EWN++ P V + G GE +I+AIL + + F +
Sbjct: 187 QVVLVEFVEWNDKQDSPNGKVKSILGEPGEHNTEIHAILAQYGLPYE-FPTAVEEYANQL 245
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
+ +E+ R+D+R +TIDP+ A D DDALS E+L +G +G+HIADVS++V
Sbjct: 246 DKSITDQEISKRRDMRESLTYTIDPADAKDFDDALSFEKLENGHYEIGIHIADVSHYVKE 305
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
GT LD EA R+TSVY++ R +PMLP +LS V SLNP D+L FS ++++ +G V +
Sbjct: 306 GTPLDDEAYERATSVYLVDRVVPMLPEVLSNGVCSLNPHEDKLCFSSVFEMDDSGKVYKQ 365
Query: 385 WIGRTVIRSCCKLSYEHAQDIID-GKFDVESSNTLGEGWPQLYGQFEWSD--VVRSIKSL 441
W GRT+I S + +YE AQ II+ GK ++ + +L + + +D +V + +L
Sbjct: 366 WFGRTIIHSDQRFAYEEAQHIIETGKGEIPAEISLTQ-------KDTTADPAIVEATLTL 418
Query: 442 YEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTA 501
++K ++++R GAL + ++ F +E P +D N L EEFMLLAN+
Sbjct: 419 DSIAKKMRNERMVQGALSFDKTEVKFNLNENSEPVGVYFKTSKDANKLIEEFMLLANRKV 478
Query: 502 AEVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK 560
A I + P + R H PN KL ++ G +LD QSL + +K
Sbjct: 479 AAFIGKRDPKHTFVYRIHDEPNDEKLGALAKIVTRFGHKLDLRDRKHVTQSLNKLLIDVK 538
Query: 561 --DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
+ + D L A R M A Y + GHY LAF Y+HFTSP+RRYPD++
Sbjct: 539 GNKEQNMVDTL---AIRTMSKAEYSTQ-------NIGHYGLAFDYYSHFTSPIRRYPDVM 588
Query: 619 VHRTLNAALE-----AEKLY 633
VHR L L+ +E+LY
Sbjct: 589 VHRLLQHYLDKGKSVSEELY 608
>gi|302804083|ref|XP_002983794.1| hypothetical protein SELMODRAFT_445658 [Selaginella moellendorffii]
gi|300148631|gb|EFJ15290.1| hypothetical protein SELMODRAFT_445658 [Selaginella moellendorffii]
Length = 1047
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 186/586 (31%), Positives = 278/586 (47%), Gaps = 93/586 (15%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP--ESLSCLP----C 263
RID W +S FP+ HV+ G G++ ++NAIL EN I + FS SL LP
Sbjct: 317 RIDNWELDSRFPRGHVVRSLGPIGDLNAELNAILVENGISVAPFSNFIRSLQELPEDSLD 376
Query: 264 VPWEVPQEELLSRKDLR---NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 320
PW +P+EE R+D+R C +IDP + D+DD LS+ L +G+ +GVHIADVSY
Sbjct: 377 NPWSIPEEEFAVRRDIRFSHRSC--SIDPPGSKDVDDVLSVSDLENGMVEIGVHIADVSY 434
Query: 321 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG- 379
FV G+ LD+EA+ R T+VYM+ + MLP +LSE + SL G DRLA S+ W L+
Sbjct: 435 FVKQGSLLDLEARSRGTTVYMVGKSWHMLPSVLSENLCSLVGGKDRLAVSVIWTLDRQNN 494
Query: 380 -DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSI 438
+VV W GRT+IRS +L Y A+ I++GK L GW G + S + +
Sbjct: 495 FEVVKTWFGRTIIRSRYQLFYAQAETIMEGK-------RLLPGWEIKSGSNDLSQLQSDL 547
Query: 439 KSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLAN 498
L ++ + R +GAL L +++ F DE P +N++ E M+ AN
Sbjct: 548 LLLGTFAQSRRLFRRLNGALELASTELKFEIDERREPVQVETKVELPMNWIVAEMMIYAN 607
Query: 499 KTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREK 558
E I RAFP ALLR+H P K+ F T+ Q SL++ R+
Sbjct: 608 ACVGEKIYRAFPSCALLRKHSPP---KIDSF------------TTLLEQLAASLDRMRD- 651
Query: 559 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
D+V+ A YF +G+ + + + HY LA YTHFTSP+RRY D++
Sbjct: 652 -SGDFVVE-------------AEYFSTGEDLEPSHFYHYGLALEFYTHFTSPIRRYADIL 697
Query: 619 VHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAAL 678
HR L AA + + L +GI S+E +E
Sbjct: 698 AHRMLIAACQEQNLE---------------------SGIVKVPHIMSSIELQE------- 729
Query: 679 KYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFM 738
VA H N++ + + C +LY+ + L +K+ A V+ + + +
Sbjct: 730 ------------VAEHVNEKHRTSKRAQKECNELYLLMFL-QKQAKAELAVVIGVTTKGI 776
Query: 739 TIYIEKLAIERRIYYDEVEGLIV--EWLETTSTLVLSLCAHKRSFK 782
+++ K + + ++ G ++ E TS L K S K
Sbjct: 777 MVFVPKYDLRGLVLLEDKNGRVILPEMHSETSEKQYRLIKQKTSIK 822
>gi|299747393|ref|XP_002911164.1| mitotic control protein dis3 [Coprinopsis cinerea okayama7#130]
gi|298407498|gb|EFI27670.1| mitotic control protein dis3 [Coprinopsis cinerea okayama7#130]
Length = 1002
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 170/450 (37%), Positives = 232/450 (51%), Gaps = 39/450 (8%)
Query: 191 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 250
I+ R + + + +++ + ID W S +P+ H + G+ E + ++L E +
Sbjct: 429 IRLRTRQAPSLVGQKILVS-IDRWEVTSRYPEGHFVRALGKVESKEAEQESLLLEFDVPY 487
Query: 251 SGFSPESLSCLPCV--PWEVPQEE-----LLSRKDLRNFCIFTIDPSTATDLDDALSIER 303
F L CLP W VP ++ R+DLR I +IDP D+DDAL +
Sbjct: 488 RPFGKAILDCLPKEGDQWVVPPKDDSHPDWRGREDLRYLNICSIDPPGCQDIDDALHARK 547
Query: 304 LSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPG 363
L +G GVHIADVS+FVLP T +D EA R T+VY++ ++I MLP LL + SL P
Sbjct: 548 LPNGNIEAGVHIADVSHFVLPDTPMDNEAASRGTTVYLVDKRIDMLPALLGTNLCSLRPF 607
Query: 364 VDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP 423
V+RLAFS W+L D+V ++VI S +YE AQ D K L +
Sbjct: 608 VERLAFSTIWELTPEADIVSVRFFKSVIASKAAFTYEEAQIRKDDK-------NLKD--- 657
Query: 424 QLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLS 481
D+ SI+ L ++ LK KR GAL L + + D E P D
Sbjct: 658 ---------DITESIRLLNHLAIKLKGKRMAAGALNLASPEVKIHLDSSESSDPIDVEQK 708
Query: 482 GREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRKLREFEAFCSKHGL 538
+ N L EEFMLLAN + A+ I FP +A+LRRH P N KL++ + GL
Sbjct: 709 ELRETNSLVEEFMLLANISVAKKIQETFPQTAVLRRHLSPPKTNFEKLQDI--LLKRKGL 766
Query: 539 QLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHY 597
LD SSSG SL+ + D F+ L+ ATR M A YFCSG DT +GHY
Sbjct: 767 NLDVSSSGALASSLDNC---VDPDEPAFNTLVRIMATRCMLSAEYFCSGSVSKDT-FGHY 822
Query: 598 ALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
LA P+YTHFTSP+RRY D++ HR L AA+
Sbjct: 823 GLATPIYTHFTSPIRRYSDVLAHRQLAAAI 852
>gi|305665811|ref|YP_003862098.1| putative exoribonuclease [Maribacter sp. HTCC2170]
gi|88710579|gb|EAR02811.1| putative exoribonuclease [Maribacter sp. HTCC2170]
Length = 729
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 226/443 (51%), Gaps = 28/443 (6%)
Query: 194 RLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGF 253
+ E+GD V I EW +++ P + + G+ GE +I++IL E + F
Sbjct: 183 KAEDGDK------VVVEITEWPDKASSPFGTITSILGKPGEHHTEIHSILAEYGLPYE-F 235
Query: 254 SPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 313
E + + EE+ R+D+R FTIDP A D DDALS E L +G +G+
Sbjct: 236 PYEVEQYANTLDTSIKAEEIAKRRDMREVLTFTIDPKDAKDFDDALSFEILENGNYEIGI 295
Query: 314 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 373
HIADVS+++ P T LD EA R+TSVY++ R +PMLP +LS SL P ++ FS +
Sbjct: 296 HIADVSHYLKPDTILDEEAYDRATSVYLVDRVVPMLPEVLSNNACSLRPNEEKYTFSAIF 355
Query: 374 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID-GKFDVESSNTL-GEGWPQLYGQFEW 431
+L+ + ++W GRTVI S + +YE AQ II+ G + + ++ G G+
Sbjct: 356 ELDDKAIIKNQWFGRTVIDSNERFAYEEAQYIIENGNGSIPNEISIRGNGYSV------S 409
Query: 432 SDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFE 491
D+V + +L ++KI++ KR GA+ + + F ++ P +D N L E
Sbjct: 410 EDIVNATLTLDRLAKIMRSKRMQQGAISFDKVEVRFNLNKNNEPESVYFKEAKDANKLIE 469
Query: 492 EFMLLANKTAAEVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQ 550
EFMLLAN+ AE I + P + R H PN KL S+ G +L+
Sbjct: 470 EFMLLANRKVAEFIGKQKPKKTFIYRIHDDPNEEKLMALNGIISRFGHKLNFKDKKSISA 529
Query: 551 SLEQAREKLK--DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFT 608
SL Q E +K + L D L A R M A Y + GHY LAF Y+HFT
Sbjct: 530 SLNQLLEDVKGQKEQNLVDTL---AIRSMSKAIYTTD-------NIGHYGLAFDYYSHFT 579
Query: 609 SPLRRYPDLVVHRTLNAALEAEK 631
SP+RRYPD++VHR L L+ K
Sbjct: 580 SPIRRYPDVMVHRLLQHYLDEGK 602
>gi|372209869|ref|ZP_09497671.1| ribonuclease R [Flavobacteriaceae bacterium S85]
Length = 737
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 154/435 (35%), Positives = 231/435 (53%), Gaps = 26/435 (5%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V A I +W +S P + V G+ GE +I+AIL E + F + +
Sbjct: 194 VVAEITDWPSDSKNPFGIITRVLGKSGEHNTEIHAILAEYDLPYE-FPSQVEEAAKALEI 252
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
E+ ++E+ R+DLR+ FTIDP A D DDALS + L +G ++G+HIADVS++V G+
Sbjct: 253 EITEDEIAKRRDLRDVLTFTIDPKDAKDFDDALSFQVLENGNYQIGIHIADVSHYVQEGS 312
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R +PMLP +LS V SL P ++L FS +++N +++ +W
Sbjct: 313 VLDNEAFERATSVYLVDRVVPMLPEMLSNGVCSLRPNEEKLTFSAIFEMNEKAELLHQWF 372
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ-FEW-SDVVRSIKSLYEV 444
GRTV S + +YE AQ II+ + E++ L G+ +E +++ ++I +L +
Sbjct: 373 GRTVTYSDKRFAYEEAQVIIE---NPEANPPTIPSEISLTGESYEVDTNIAKAILTLDSL 429
Query: 445 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 504
+K ++ KR GAL + + F +E P +D N L EEFMLLANK AE
Sbjct: 430 AKKMRAKRLKSGALAFDKIETKFNLNEKSEPVGVFFKESKDANKLIEEFMLLANKKVAEF 489
Query: 505 IAR---AFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDT----SSSGQFHQSLEQAR 556
I R P + R H PN+ KL SK G ++T S+S ++ L+ A
Sbjct: 490 IGRTKSGQPKKTFIYRVHDEPNVDKLEALGNLVSKFGYAINTKSRISTSSSLNKLLKDAH 549
Query: 557 EKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPD 616
K + +++ R M A Y + GHY LAF Y+HFTSP+RRYPD
Sbjct: 550 GKAES-----NMIETLTIRSMSKAEYTTE-------NIGHYGLAFDYYSHFTSPIRRYPD 597
Query: 617 LVVHRTLNAALEAEK 631
++ HR L L+ K
Sbjct: 598 VMAHRLLQHYLDRGK 612
>gi|348686498|gb|EGZ26313.1| hypothetical protein PHYSODRAFT_345136 [Phytophthora sojae]
Length = 1105
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 179/576 (31%), Positives = 267/576 (46%), Gaps = 95/576 (16%)
Query: 112 PTKRPTGRVVSIIERSPRRD-GIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL 170
P PTG+VV II RSPR V VN GG +Y
Sbjct: 407 PGAIPTGQVVGIISRSPRYHVATVIASTVN------GGD----------------DYALA 444
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
P + PK+ + + L + KRL+ ID W +S +P H + + G
Sbjct: 445 VPMDVRLPKVRLRSQRLDALLDKRLK------------VVIDSWAADSSYPNGHYVGILG 492
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLP------------CVP------------- 265
G ++ +++A+L +N + + FS +L+CLP CV
Sbjct: 493 APGSLQTELSALLVDNEVEEAPFSEAALACLPSSDECPIDIEGGCVAECSTAKRPARCGL 552
Query: 266 --WEVPQEELLSRKDLR-NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
W+VP EE+ R+DLR +F++DP D+DDA+SI+RL +G +GVHIADVSYFV
Sbjct: 553 LNWKVPDEEVPHRRDLRKTHRVFSVDPHGCQDIDDAMSIQRLPNGNVELGVHIADVSYFV 612
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ALD+E + R T+VY++ +++ MLP +LS ++ SL+ DR A S+ +L+ +
Sbjct: 613 KHGSALDLEGRRRGTTVYLVGQRLDMLPSVLSADLCSLHENRDRFAVSVMCELDGETYAI 672
Query: 383 ---DRWIGRTVIRSCCKLSYEHAQDIIDG-KFDVESSNTLG------------EGWPQLY 426
W GRT+IR+C ++YE A ++ G D + S G EG
Sbjct: 673 IENSTWFGRTIIRNCSSMTYEQAHRLLQGVNADADDSPRRGSARSQPPPSEHVEGVAGGR 732
Query: 427 GQFEWSDVVRS-IKSLYEVSKILKDKRFTDGALRLENSKPVFL---FDEYGTPYDSVLSG 482
+ ++R ++ L +V + L R + G L L + V E G D ++
Sbjct: 733 IPMKLQQLIREDLRILTDVGRRLGRTRGSQGGLDLSKQEEVRFSLNVSELGQ-EDVEITV 791
Query: 483 REDLNF--LFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQL 540
+E L E M+ AN T A + FP ALLRRHP P+ + + + +
Sbjct: 792 KESLEIHGTIAELMIFANSTVARKLVERFPTHALLRRHPPPSGDRFTQLVQLAKARDVVI 851
Query: 541 DTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK---------DD 591
D +++ QSL A + D +L + A R M A Y SG D
Sbjct: 852 DATNNFTLQQSLAAAERSGRMDSKTMSLLKSLAVRVMTEAEYVSSGAVAAVDAASSNGDV 911
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
T + HY L YTHFTSP+RRY D++VHR L AA+
Sbjct: 912 TRFAHYGLGLQYYTHFTSPIRRYADVIVHRQLLAAI 947
>gi|333382728|ref|ZP_08474394.1| ribonuclease R [Dysgonomonas gadei ATCC BAA-286]
gi|332828329|gb|EGK01038.1| ribonuclease R [Dysgonomonas gadei ATCC BAA-286]
Length = 716
Score = 246 bits (627), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 222/429 (51%), Gaps = 45/429 (10%)
Query: 211 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC-VPWEVP 269
I EW +++ P VL + G+ GE ++NAIL E + PE + +P E+
Sbjct: 196 IVEWPQKAKNPIGKVLDILGQAGENNTEMNAILAEFGLPYK--YPEKIEAFANKIPDEIT 253
Query: 270 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 329
EE+ R+D RN FTIDP A D DDALSI+++ +G VGVHIADV+++V G +D
Sbjct: 254 PEEIAKREDFRNTLTFTIDPRDAKDFDDALSIKQIKNGRWEVGVHIADVTHYVQEGDIID 313
Query: 330 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 389
E + R+TS+Y++ R IPMLP LS + SL P D+L +S ++L+ ++ I RT
Sbjct: 314 KEGESRATSIYLVDRTIPMLPERLSNGLCSLRPHEDKLCYSAIFELDDDANIKKSRIART 373
Query: 390 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 449
VI S + +YE AQDII+ GEG D I L +++K L+
Sbjct: 374 VIHSDRRFTYEEAQDIIE----------TGEG-----------DYKDEILKLNDLAKKLR 412
Query: 450 DKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 509
KRF +GA+ + + F DE G P +D N L EEFMLLAN+T AE I
Sbjct: 413 GKRFDNGAIAFDRHEVRFEIDEKGKPISVYFKYAKDSNKLIEEFMLLANRTVAEFIGNVP 472
Query: 510 PD----SALLRRHPAPNMRKLREFEAFCSKHGLQL-----DTSSSGQFHQSLEQAREKLK 560
+ + + R H PN K+ F + G ++ T+ S + L++ K +
Sbjct: 473 KNKNAKTFVYRIHDLPNAEKMENLSEFIRRFGYKIKVDGSKTNVSKSINHLLDEVSGKPE 532
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
+ +++ A R M A Y + GHY LAF YTHFTSP+RRYPD++VH
Sbjct: 533 E-----NLISTIAIRAMAKAIYST-------VNIGHYGLAFEYYTHFTSPIRRYPDMMVH 580
Query: 621 RTLNAALEA 629
R L ++
Sbjct: 581 RLLTRYMDG 589
>gi|357061128|ref|ZP_09121888.1| ribonuclease R [Alloprevotella rava F0323]
gi|355375145|gb|EHG22435.1| ribonuclease R [Alloprevotella rava F0323]
Length = 779
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 168/474 (35%), Positives = 240/474 (50%), Gaps = 57/474 (12%)
Query: 191 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 250
I K+ +G T + +V +I EW +S P V+ + G GE ++ AIL E +
Sbjct: 159 IPKKFLKGGKTGDKAVV--KIVEWPHDSKSPIGKVVDILGHQGENNAEMCAILAEYNLPY 216
Query: 251 SGFSPESLSCLPC-VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS---- 305
S PE + +P E+P EE+ R+D R+ FTIDP A D DDA+SI R+S
Sbjct: 217 S--YPEKVELAANNIPVEIPAEEIKRREDFRDAVTFTIDPRDAKDFDDAISIRRISGKGL 274
Query: 306 ------------DGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
+ VGVHIADVSY+V G +D EA R+TSVY++ R IPMLP L
Sbjct: 275 PLSTARPKTTSSKAVWEVGVHIADVSYYVKEGDTIDREAYNRATSVYLVDRTIPMLPEKL 334
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
++ SL +++A+S + +N G+V+D + TVIRS + +YE Q I++ +
Sbjct: 335 CNQLCSLRQDEEKVAYSTIFHINERGEVLDWHLAHTVIRSNRRFTYEEVQYILEHNGEAS 394
Query: 414 SSN---------TLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
+++ L EG P L G+F VV L ++K+L+DKRF +GA+ + +
Sbjct: 395 AADLQTPGEHPEVLPEGTP-LTGEFAEELVV-----LNRLAKLLRDKRFKNGAIGFDRPE 448
Query: 465 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF----PDSALLRRHPA 520
F D+ G P + L D N L EEFMLLAN++ AE I + P + + R H
Sbjct: 449 VRFEIDDKGHPVSTYLKIARDANKLVEEFMLLANRSVAERIGKVARGKKPKTFVYRIHDI 508
Query: 521 PNMRKLREFEAFCSKHGLQLDTSSSGQ-----FHQSLEQAREKLKDDYVLFDILINYATR 575
P+ KL + F + G +L T S Q +Q LE + +++ V A R
Sbjct: 509 PDPEKLEKLNGFIGRFGYKLRTEGSKQEVSKSLNQLLEDVHNRPEENMVEM-----VALR 563
Query: 576 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
M A Y + GHY L F YTHFTSP+RRYPDL+VHR L E
Sbjct: 564 AMMKARYSIH-------NIGHYGLMFDYYTHFTSPIRRYPDLMVHRLLTRYAEG 610
>gi|322697987|gb|EFY89761.1| mitotic control protein dis3 [Metarhizium acridum CQMa 102]
Length = 947
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 196/583 (33%), Positives = 278/583 (47%), Gaps = 61/583 (10%)
Query: 60 EAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGR 119
+A + ++IE + N + T D + VS ++ +R + SS +PT +
Sbjct: 285 KAPSTKIIEED--NITKNENADTEDRNDFVSDKERKALQEEAKR-THKSSSESQLQPTAK 341
Query: 120 VVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPK 179
VV +I+R+ W Y G + +S ++ + L P K PK
Sbjct: 342 VVGVIKRN--------------WRQYVGHIDPSSASKSASSQGRKQDSVFLIPMDKKIPK 387
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
+ + + + + + KRL LV ID W +S P H + G +
Sbjct: 388 IRLRTRQVSELLGKRL----------LVT--IDAWERDSRHPVGHFVRSLGELETKAAET 435
Query: 240 NAILYENAICCSGFSPESLSCLPC------VPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
A+L E + F L CLP VP V R+DLR I +IDP
Sbjct: 436 EALLLEWDVQYRPFPKTVLDCLPKEGHDWKVPASVEDPGWKDREDLRGLLICSIDPVGCQ 495
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D+DDAL +L +G VGVHIADVS+FV P A+D EA +R T+VY++ ++I MLP LL
Sbjct: 496 DIDDALHARKLPNGNFEVGVHIADVSHFVKPANAMDTEASIRGTTVYLVDKRIDMLPPLL 555
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
++ SL P V+R AFS+ W+LN D+V+ ++VI+S SYE AQ ID D
Sbjct: 556 GTDLCSLKPYVERYAFSVLWELNDNADIVNVRFTKSVIKSREAFSYEQAQLRID---DTS 612
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEY 472
+ L G ++ L +SK LK KR GAL L + + V + E
Sbjct: 613 QQDELTNG----------------MRMLLALSKKLKKKRMDAGALSLSSPEVKVQMESET 656
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EA 531
P D D N L EEFML AN + A I AFP +A+LRRH P E +
Sbjct: 657 SDPIDVKTKELLDTNSLVEEFMLFANVSVAAKIYDAFPQTAILRRHAPPPKTNFDELADQ 716
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKD 590
K G +L T +S SL+ +K D + F+ L+ ATR M A YFCSG +
Sbjct: 717 LRVKRGFELRTDTSKALADSLDACVDK-SDPF--FNTLVRIMATRCMMSAEYFCSGT-QA 772
Query: 591 DTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
++ HY LA +YTHFTSP+RRY DL+ HR L AA+ E ++
Sbjct: 773 YPEFRHYGLASEIYTHFTSPIRRYADLLAHRQLAAAIGYEAVH 815
>gi|332878670|ref|ZP_08446387.1| ribonuclease R [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332683307|gb|EGJ56187.1| ribonuclease R [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 692
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 255/522 (48%), Gaps = 68/522 (13%)
Query: 118 GRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKY 177
G V IIER +R VG + +++ F + + PT P+
Sbjct: 99 GEVTKIIERKKQR--FVGTVQLHKNFAF------------------------VVPTDPRM 132
Query: 178 PKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEP 237
+ KD ++GD I RID+W + P V V G G
Sbjct: 133 YTDFFVKKDKLGGA----QDGDRVI------VRIDDWKDHHDSPIGVVEQVLGIPGHQTT 182
Query: 238 QINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLD 296
++++IL E + + PE + + + +EE+ R+D+R+ FTIDP A D D
Sbjct: 183 EMHSILAEYGLPYT--YPEEVEAFAKSLDLSIKEEEISHRRDMRDTLTFTIDPRDAKDFD 240
Query: 297 DALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEE 356
DALS + L +G +GVHIADVS++V GT LD EA R+TSVY++ R +PMLP +L
Sbjct: 241 DALSFKMLDNGNYEIGVHIADVSHYVKEGTILDEEAYNRATSVYLVDRVVPMLPEVLCNF 300
Query: 357 VGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSN 416
SL P D+ FS +++N +V++ W+GRT S + +YE AQ +I+
Sbjct: 301 ACSLRPDEDKYTFSAVFEMNQRAEVLNVWLGRTATHSSFRFAYEEAQSVIE-------EA 353
Query: 417 TLGEGWPQLYGQFEWSD--------VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 468
+GEG+ + +D VV +I +L +++ L+ KR GA+ + + F
Sbjct: 354 KVGEGYT-IPADISITDTERSIPANVVEAILTLNTLAQRLRSKRIRLGAITFDKVEVKFD 412
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 528
D+ G P ++ N L EEFMLLAN+ AE +A+ + + R H P+ KL++
Sbjct: 413 LDDNGNPTGVYFKESKEANKLIEEFMLLANRKVAEYVAK-MKKTFVYRIHDEPDADKLQQ 471
Query: 529 FEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSG 586
F ++ G L+ ++ SL E++ K + L D L A R M ASY
Sbjct: 472 FNGVIARFGYSLNLNNKKTITDSLNNLLEEVKGKKEQNLVDTL---AIRSMAKASYSTR- 527
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
+ GHY LAF YTHFTSP+RRYPD++VHR L L+
Sbjct: 528 ------NIGHYGLAFDYYTHFTSPIRRYPDVMVHRLLQLYLD 563
>gi|149369339|ref|ZP_01889191.1| exoribonuclease II [unidentified eubacterium SCB49]
gi|149356766|gb|EDM45321.1| exoribonuclease II [unidentified eubacterium SCB49]
Length = 741
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 149/436 (34%), Positives = 221/436 (50%), Gaps = 24/436 (5%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
E V I +W E++ P +V+ G GE +I++IL + + F E +
Sbjct: 190 ERVLVEIIDWPEKADSPNGNVIKSLGMPGEHNTEIHSILAQYGLPYE-FPAEVEDYANKI 248
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
+ E+ R+D+R FTIDP A D DDALS L +G +G+HIADVS+++ P
Sbjct: 249 DTSIHASEIAKRRDMRKDLTFTIDPKDAKDFDDALSFTELENGNYEIGIHIADVSHYLKP 308
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
GT LD EA R+TSVY++ R +PMLP +LS SL P ++ FS +++N +VV+
Sbjct: 309 GTVLDDEAFERATSVYLVDRVVPMLPEILSNGACSLRPHEEKYTFSAVFEMNKKAEVVNE 368
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--------VVR 436
W GRTV S + +YE AQ II+ E G+ + + +D + +
Sbjct: 369 WFGRTVTYSDARFAYEEAQLIIENNSHPEPVE--GQLNTTITSEISITDKEYEVEQPIAK 426
Query: 437 SIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLL 496
+I + ++KIL+ R +GA+ + + F+ D+ P +D N L EEFMLL
Sbjct: 427 AILEMDRLAKILRKARMNNGAISFDKVEVKFILDKEANPEGVYFKESKDANKLIEEFMLL 486
Query: 497 ANKTAAEVIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQA 555
AN++ A I + P + R H P+ K+ E + G ++DT QSL Q
Sbjct: 487 ANRSVAAFIGKQNPKKTFVYRVHDEPDDEKIAALENLIKQFGYKMDTRDKKSTSQSLNQL 546
Query: 556 REKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRR 613
+ K + L D L A R M A Y + + GHY LAF Y+HFTSP+RR
Sbjct: 547 LSDVVGKKEQNLIDTL---AIRSMSKAVYTTN-------NIGHYGLAFDYYSHFTSPIRR 596
Query: 614 YPDLVVHRTLNAALEA 629
YPD++VHR L L+
Sbjct: 597 YPDVMVHRLLQHYLDG 612
>gi|126662735|ref|ZP_01733734.1| ribonuclease R [Flavobacteria bacterium BAL38]
gi|126626114|gb|EAZ96803.1| ribonuclease R [Flavobacteria bacterium BAL38]
Length = 725
Score = 245 bits (625), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 171/526 (32%), Positives = 262/526 (49%), Gaps = 64/526 (12%)
Query: 113 TKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTP 172
+++P V+ ++ER ++ VG +++ + F + +T
Sbjct: 130 SRKPEAEVLEVLER--KKSEFVGVIDIQKNFAF------------------------VTT 163
Query: 173 THPK-YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
T+ K Y + + + D+ E GD +V +++W +++ P V+ V G+
Sbjct: 164 TNAKMYTDIFIPKNKINDA-----EHGD------VVLVTLEDWPKKADSPFGSVIKVLGK 212
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 291
GE +I+AIL E + F E + + + +EE+ R+D+R+ FTIDP
Sbjct: 213 PGEHNTEIHAILAEYGLPYD-FPIEVEAYANKIDTSITEEEIKKRRDMRDVLTFTIDPKD 271
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
A D DDALS + L +G +GVHIADVS+++ GT LD EA R+TSVY++ R +PMLP
Sbjct: 272 AKDFDDALSFQILENGNYEIGVHIADVSHYLQEGTILDEEAYNRATSVYLVDRVVPMLPE 331
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
+LS SL P ++ FS + LN+ +V+D W GRTV S + +YE AQ+II+ K D
Sbjct: 332 VLSNFACSLRPHEEKYTFSAVFQLNNKAEVLDAWFGRTVTYSDQRFAYEEAQNIIETKSD 391
Query: 412 V---ESSNTLGEGW-PQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
V E S T E P+ +V + + E++KIL+ KR GA+ + + F
Sbjct: 392 VIPAEISLTRKEYIVPK--------PIVDATLKMDELAKILRRKRMAAGAISFDKVEVKF 443
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
+E P +D N L EEFMLLAN+ AE I + + + R H PN KL
Sbjct: 444 NLNEEAEPIGVYFKQSKDANHLIEEFMLLANRKVAEFIGKQ-KKTFIYRIHDEPNEDKLI 502
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCS 585
+ +K G ++ S SL E++ K + L D L R M A+Y
Sbjct: 503 NLQTVIAKFGYSINFRSKIDISSSLNNLLEEVQGKKEQNLVDTL---TIRSMSKAAYSTE 559
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
+ GHY LAF Y+HFTSP+RRYPD++ HR L ++ K
Sbjct: 560 -------NIGHYGLAFDYYSHFTSPIRRYPDVMAHRLLQFYIDGGK 598
>gi|423300891|ref|ZP_17278915.1| ribonuclease R [Bacteroides finegoldii CL09T03C10]
gi|408472226|gb|EKJ90754.1| ribonuclease R [Bacteroides finegoldii CL09T03C10]
Length = 718
Score = 245 bits (625), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 223/430 (51%), Gaps = 45/430 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
+I EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E+
Sbjct: 197 KITEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAEI 254
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI + +G+ VGVHIADV+++V G +
Sbjct: 255 TPEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRSIKNGLWEVGVHIADVTHYVKEGGII 314
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G++ D I
Sbjct: 315 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEIKDSRIAH 374
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K EG D + L ++K L
Sbjct: 375 TVINSDRRFTYEEAQQIIETK----------EG-----------DYKEEVLMLDTIAKAL 413
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRF GA+ + + F DE G P +D N L EEFMLLANKT AE I R
Sbjct: 414 REKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANKTVAEKIGRV 473
Query: 509 ----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
P R H P+ KL F ++ G ++ T+ S + L+ K
Sbjct: 474 PKNKKPKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTNGTKTDISKSINHLLDDIHGKK 533
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++V
Sbjct: 534 EE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDMMV 581
Query: 620 HRTLNAALEA 629
HR + ++
Sbjct: 582 HRLVTKYMDG 591
>gi|260061306|ref|YP_003194386.1| ribonuclease R [Robiginitalea biformata HTCC2501]
gi|88785438|gb|EAR16607.1| ribonuclease R [Robiginitalea biformata HTCC2501]
Length = 727
Score = 245 bits (625), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 166/522 (31%), Positives = 251/522 (48%), Gaps = 58/522 (11%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+P G+VV ++ER R++ VG ++ ++ F + + PT
Sbjct: 133 KPEGKVVRVVER--RKNAFVGIVDQSKSFAF------------------------VRPTD 166
Query: 175 PK-YPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+ Y + V + DL + + E V I W E++ P V V G G
Sbjct: 167 SRMYTDIFVSLDDL-----------NGAKDKEKVLVEIKSWPEDADSPYGKVTQVLGVPG 215
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
E +I+AIL E + F E + + E+ R+D+R+ FTIDP A
Sbjct: 216 EHNTEIHAILAEYGLPYE-FPAEVEHYANSLDTRIHPNEVSKRRDMRDTLTFTIDPKDAK 274
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D DDALS L G +G+HIADVS+++ + L+ EA R+TSVY++ R +PMLP +L
Sbjct: 275 DFDDALSFRELDGGDYEIGIHIADVSHYLNEDSILEEEAYNRATSVYLVDRVVPMLPEIL 334
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID-GKFDV 412
S SL P D+ FS + ++ V D+W GRTV S + +YE AQ +I+ G+ +
Sbjct: 335 SNNACSLRPHEDKYTFSAVFIMDDQARVKDQWFGRTVTHSNERFAYEEAQHVIETGRGSI 394
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
+ ++ Q+ G+ +V +I ++ ++++ ++ R GA+ + + F DE
Sbjct: 395 PADISIRGKAYQISGE-----IVNAIYTMDQLARKMRKLRMQHGAISFDKVEVKFNLDEE 449
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR-HPAPNMRKLREFEA 531
P +D N L EEFMLLAN+ AE I + P + R H P+ KL
Sbjct: 450 NNPVGVFFKESKDANKLIEEFMLLANRKVAEFIGKQQPKKTFVYRVHDEPDEDKLIALNG 509
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLK--DDYVLFDILINYATRPMQLASYFCSGDFK 589
+ G QL+ + + SL Q E +K + L D L A R M ASY
Sbjct: 510 IVKRFGHQLNFKNKKNLNHSLNQLLEDVKGRKEQNLVDTL---AIRSMSKASYTTD---- 562
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
+ GHY LAF YTHFTSP+RRYPD++VHR L+ L K
Sbjct: 563 ---NIGHYGLAFDYYTHFTSPIRRYPDVMVHRLLHQYLNGAK 601
>gi|372223167|ref|ZP_09501588.1| ribonuclease R [Mesoflavibacter zeaxanthinifaciens S86]
Length = 730
Score = 245 bits (625), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 260/545 (47%), Gaps = 58/545 (10%)
Query: 89 VSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG 148
+ +S+ N + E + ++ S KRP G +V ++ R + VG L N+ F +
Sbjct: 108 IPNSKLNGAFHQDEVMVSLRPSRKGKRPEGEIVKVLNRF--KTEYVGVLERNRNFAF--- 162
Query: 149 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVA 208
P +M D+ ++K +E D + V
Sbjct: 163 ------------------------VRPMDNRMYT---DIFVPLEKTMEAEDGS----KVL 191
Query: 209 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEV 268
+ +W +E+ P V+ V G GE +I++IL E + F E + +
Sbjct: 192 VALGDWPKEADSPYGKVVKVLGMPGEHNTEIHSILAEYGLPYE-FPYEVEQFANKLDTSI 250
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D+R FTIDP A D DDALS +L +G +G+HIADVS++V P + L
Sbjct: 251 KAEEIAKRRDMRQDLTFTIDPKDAKDFDDALSFTKLENGNFEIGIHIADVSHYVTPDSIL 310
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA R+TSVY++ R +PMLP +LS SL P ++ FS ++L+ ++++W GR
Sbjct: 311 DEEAYNRATSVYLVDRVVPMLPEILSNNACSLRPREEKYTFSAIFELDKEAKLINQWFGR 370
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDV--ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
TVI S + +YE AQ II+ K + + + EG+ +V +I +L ++K
Sbjct: 371 TVIDSNERFAYEEAQHIIETKAGIIPKEISIREEGYAV------DETIVEAILTLDGLAK 424
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
I++ KR GA+ + + F DE P +D N L EEFMLLAN+ AE I
Sbjct: 425 IMRSKRMDSGAISFDKIEVRFNLDEENNPESVYFKEAKDANKLIEEFMLLANRKVAEYIG 484
Query: 507 RAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE--KLKDDY 563
+ P + R H P++ KL S+ G + + SL + E K K +
Sbjct: 485 KQKPKKTFVYRVHDQPDLDKLMALNGVISRFGHSIALKDRKTINSSLNKLLEDVKGKKEQ 544
Query: 564 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
L D L A R M A Y + GHY LAF YTHFTSP+RRYPD++VHR L
Sbjct: 545 NLVDTL---AIRSMSKAIYTTE-------NIGHYGLAFDYYTHFTSPIRRYPDVMVHRLL 594
Query: 624 NAALE 628
L+
Sbjct: 595 QHYLD 599
>gi|334365680|ref|ZP_08514630.1| ribonuclease R [Alistipes sp. HGB5]
gi|313158113|gb|EFR57518.1| ribonuclease R [Alistipes sp. HGB5]
Length = 743
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/426 (34%), Positives = 214/426 (50%), Gaps = 37/426 (8%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
E V RI +W E S P ++ G G + +++AIL E + F PE +
Sbjct: 191 EKVVVRIADWAEGSKSPVGELVERLGMAGNNDTEMHAILAEYELPYR-FDPEIEQAAEAI 249
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
+ +E+ +R+D R FT+DP+ A D DDALS+ R+ DGI +GVHIADV+++V P
Sbjct: 250 DGSITAKEIAARRDFRQVTTFTVDPADAKDFDDALSVRRVRDGIWEIGVHIADVTHYVRP 309
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
+ +D EA R TSVY++ R +PMLP LS E+ SL P L FS + LN D+++
Sbjct: 310 QSTIDDEAVERGTSVYLVDRTVPMLPERLSNELCSLRPHETSLCFSAVFTLNENLDILEE 369
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 444
W GRTVI S + +Y AQ++I+ G G D I +L +
Sbjct: 370 WFGRTVIYSDRRFTYAEAQEVIE----------TGRG-----------DYAEEILTLNRL 408
Query: 445 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 504
++ L+ +RF +GA+ + + F DE G P +++ N + EEFMLLAN+ AE
Sbjct: 409 AQALRRQRFKNGAISFDREEVKFKLDETGKPLGVYFKEQKESNQMIEEFMLLANRRVAEF 468
Query: 505 IARAFPDSA-------LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 557
+ D + R H +P+ KL F F + G + + L +
Sbjct: 469 CGKRKTDKGRTVERPMVYRVHDSPSEEKLDRFRQFILRFGHIFKATKGRAIAKELNKLFA 528
Query: 558 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
++K + + A R M A Y + GHY LAFP YTHFTSP+RRYPD+
Sbjct: 529 QIKGT-TEENAVSTMAVRSMAKAYYTTD-------NIGHYGLAFPYYTHFTSPIRRYPDM 580
Query: 618 VVHRTL 623
+VHR L
Sbjct: 581 MVHRLL 586
>gi|423214392|ref|ZP_17200920.1| ribonuclease R [Bacteroides xylanisolvens CL03T12C04]
gi|392692807|gb|EIY86043.1| ribonuclease R [Bacteroides xylanisolvens CL03T12C04]
Length = 718
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 226/430 (52%), Gaps = 45/430 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P ++ + G+ G+ +++AIL E + P+++ + +P E+
Sbjct: 197 KVTEWPDKAKNPIGQIIDILGQAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAEI 254
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G +
Sbjct: 255 SAEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGGII 314
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G++ D I
Sbjct: 315 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEIKDSRIVH 374
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K EG D + +L ++K L
Sbjct: 375 TVINSDRRFTYEEAQQIIETK----------EG-----------DFKEEVLTLDTIAKAL 413
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRF+ GA+ + + F DE G P +D N L EEFMLLAN+T AE + +
Sbjct: 414 REKRFSAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEFVGKV 473
Query: 509 FPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
+ R H P+ KL F ++ G ++ TS S + L+ K
Sbjct: 474 PKNKKPKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDIHGKK 533
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++V
Sbjct: 534 EE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRFPDMMV 581
Query: 620 HRTLNAALEA 629
HR + ++
Sbjct: 582 HRLVTKYMDG 591
>gi|298372925|ref|ZP_06982915.1| ribonuclease R [Bacteroidetes oral taxon 274 str. F0058]
gi|298275829|gb|EFI17380.1| ribonuclease R [Bacteroidetes oral taxon 274 str. F0058]
Length = 713
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 182/577 (31%), Positives = 271/577 (46%), Gaps = 85/577 (14%)
Query: 59 SEAYNQEMIEREGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPT- 117
+ AY I+R+ + P + ++ N +N +++ M+ YP +R
Sbjct: 74 TAAYITGTIDRQSVAHKTYLVPDDGSESVFIAERSMNRALNG-DKVKVML--YPLRRKKE 130
Query: 118 --GRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
G VV IIER R+ VG + D+K + L +++
Sbjct: 131 LEGEVVEIIERV--RERFVGII--------------DSKHGVTILKANNKQL-------- 166
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
P +++ P K + G I A I W ++ P ++ + G G
Sbjct: 167 --PMNIII----PPDKTKGAKNGQKCI------AAITYWGDKYENPIGEIVDILGDTGNN 214
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
+++AIL E + S + E +P + ++E+ R D R FTIDP A D
Sbjct: 215 NTEMHAILAEYGLPYS-YPQEIEKEANKIPETITEDEIKRRIDFRTTTTFTIDPRDAKDF 273
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALSI+ L DG+ VGVHIADV++FV G +D EA R+TSVY++ R +PMLP LS
Sbjct: 274 DDALSIKDLGDGLWEVGVHIADVTHFVPEGGIIDQEAVKRATSVYLVDRTVPMLPEHLSN 333
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
+ SL P ++L +S + +N +V+D I RTVI+S + +YE AQ+II+
Sbjct: 334 FICSLRPDEEKLTYSCIFTINDLAEVIDYKIARTVIKSDRRFTYEEAQEIIE-------- 385
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTP 475
G+G D + L +++K L++KRF GA+ E S+ F D+ G P
Sbjct: 386 --TGKG-----------DFATEVLRLNDLAKKLREKRFASGAIAFERSEVRFEIDDTGKP 432
Query: 476 YDSVLSGREDLNFLFEEFMLLANKTAAEVIA----RAFPDSALLRRHPAPNMRKLREFEA 531
+D N L EEFMLLANK A+ I R P + + R H PN KL F
Sbjct: 433 VSVFFKESKDSNKLIEEFMLLANKYVAQHIGMPRNREKPKTFVYRIHDVPNPEKLSNFAT 492
Query: 532 FCSKHGLQL-----DTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSG 586
F K G ++ T+ S + L+Q K + +++ A R M A+Y
Sbjct: 493 FIKKFGYKIKTDGKKTAVSSSINHLLDQIEGKKEQ-----NMIETLAIRSMAKAAYSTK- 546
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
+ GHY LA YTHFTSP+RRYPD++VHR L
Sbjct: 547 ------NIGHYGLAMKYYTHFTSPIRRYPDMMVHRLL 577
>gi|441495903|ref|ZP_20978141.1| 3'-to-5' exoribonuclease RNase R [Fulvivirga imtechensis AK7]
gi|441440438|gb|ELR73703.1| 3'-to-5' exoribonuclease RNase R [Fulvivirga imtechensis AK7]
Length = 719
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 161/518 (31%), Positives = 250/518 (48%), Gaps = 71/518 (13%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
++P G+V+ IIER+ +D VG + +
Sbjct: 136 RKPEGKVIEIIERA--KDQFVGRIEFS--------------------------------- 160
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
P++ ++ + + I +L+ + V +I EW P+ V++V G G
Sbjct: 161 -PRFAFVIADNRKIYQDIFVKLDATKGAAHNDKVIVKITEWPGPDRSPEGEVINVLGPAG 219
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTAT 293
+ E +I++I+ E + F + ++ ++E+ RKD R+ FTIDP A
Sbjct: 220 DNEAEIHSIMAEFDLPFE-FPQHVEKEAEKISEKITKQEIEKRKDFRDVLTFTIDPEDAK 278
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
D DDALS + L +G +GVHIADV+++V PGT L+ EA R+TSVY++ R +PMLP L
Sbjct: 279 DFDDALSFKNLENGNFEIGVHIADVTHYVQPGTILEQEAFDRATSVYLVDRTVPMLPERL 338
Query: 354 SEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
S + SL P D+L F+ ++++ +V+ W GRT+I S + +YE AQ I+
Sbjct: 339 SNGLCSLRPKEDKLTFAAVFEMDEEANVIKEWFGRTIIHSDRRFTYEEAQGGIE------ 392
Query: 414 SSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYG 473
G G D + ++ L +++K L+ +RF GA+ E ++ F DE G
Sbjct: 393 ----TGVG-----------DYAKELQKLNDLAKKLRKERFNRGAVNFETTEVKFKLDEKG 437
Query: 474 TPYDSVLSGREDLNFLFEEFMLLANKTAAEVI----ARAFPDSALLRRHPAPNMRKLREF 529
P + R+D + L EEFMLLANK A + ++ + R H P+ K+ F
Sbjct: 438 KPLGVIPKVRKDAHKLIEEFMLLANKKVATFVFGMKKGEDKNTFVYRTHDFPDPEKVGTF 497
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFK 589
F + G +L T G QSL + ++ ++L A R M A Y
Sbjct: 498 AQFAKRFGHELKT-DQGAISQSLNKLMTSIEGKPEE-NVLQQLAIRSMAKAKYTTEA--- 552
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
GH+ LAFP YTHFTSP+RRYPD++VHR L L
Sbjct: 553 ----TGHFGLAFPHYTHFTSPIRRYPDMMVHRLLQHYL 586
>gi|383115522|ref|ZP_09936278.1| ribonuclease R [Bacteroides sp. D2]
gi|313695072|gb|EFS31907.1| ribonuclease R [Bacteroides sp. D2]
Length = 718
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 225/430 (52%), Gaps = 45/430 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E+
Sbjct: 197 KVTEWPDKAKNPIGQVIDILGQAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAEI 254
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI +L DG+ VGVHIADV+++V G +
Sbjct: 255 SAEEIAKREDFRKTTTFTIDPKDAKDFDDALSIRKLKDGLWEVGVHIADVTHYVKEGGII 314
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 315 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVRDSRIVH 374
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K EG D + +L ++K L
Sbjct: 375 TVINSDRRFTYEEAQQIIETK----------EG-----------DYKEEVLTLDTIAKAL 413
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE + +
Sbjct: 414 REKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEFVGKV 473
Query: 509 FPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
+ R H P+ KL F ++ G ++ TS S + L+ K
Sbjct: 474 PKNKKPKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDIHGKK 533
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++V
Sbjct: 534 EE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFEYYTHFTSPIRRFPDMMV 581
Query: 620 HRTLNAALEA 629
HR + ++
Sbjct: 582 HRLVTKYMDG 591
>gi|225438440|ref|XP_002276909.1| PREDICTED: exosome complex exonuclease RRP44 isoform 1 [Vitis
vinifera]
Length = 899
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 170/521 (32%), Positives = 256/521 (49%), Gaps = 94/521 (18%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RP+GRVV II+R+ W +Y GS + + + ++
Sbjct: 338 RPSGRVVGIIKRN--------------WHSY-CGSLEPMPMPAGNGGIAHALFVS---KD 379
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ PK+ + + L + + KR+ +VA +D W+ S +P H +
Sbjct: 380 RRIPKIRIQTRQLGNLLDKRI----------IVA--VDSWDCLSRYPSGHYV-------- 419
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLS--RKDLRNFCIFTIDPSTA 292
+L EN I FS + L+CLP +PW V E+L + R DLR+ C+F++DP
Sbjct: 420 -------VLIENDINSRPFSLQVLACLPPLPWSVSSEDLANPCRLDLRHVCVFSVDPPD- 471
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
IADV+ FV PGT LD EA R TSVY+++R+I MLP
Sbjct: 472 ----------------------IADVTNFVHPGTPLDDEAAQRGTSVYLVERRIDMLPKP 509
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
L+E++ SL V+RLAFS+ W++ +++ +++I+SC LSY AQ +D +
Sbjct: 510 LTEDICSLRSDVERLAFSVIWEMTPQAEIISTKYTKSIIKSCAALSYIEAQARMDDSRLM 569
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-E 471
+ + ++++ ++K+++ +R GAL L +++ F D E
Sbjct: 570 DP-------------------LTMDLRNMNALAKVMRLRRIERGALTLASAEVKFQIDTE 610
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEA 531
P D + + N + EEFML AN + AE I + FP +LLRRHP+P L
Sbjct: 611 THDPLDIGMYQIREANQMVEEFMLAANVSVAEKILKHFPLCSLLRRHPSPTREMLEPLLR 670
Query: 532 FCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDD 591
+ GL LD SSS SL+ A + DD ++ ATR M A YFCSGD
Sbjct: 671 TAAAVGLNLDVSSSKALADSLDHA---VGDDPYFNKLIRILATRCMTQAVYFCSGDLS-P 726
Query: 592 TDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
++ HY LA P+YTHFTSP+RRY D++VHR L A+L KL
Sbjct: 727 PEFHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLGLYKL 767
>gi|218131623|ref|ZP_03460427.1| hypothetical protein BACEGG_03243 [Bacteroides eggerthii DSM 20697]
gi|217985926|gb|EEC52265.1| ribonuclease R [Bacteroides eggerthii DSM 20697]
Length = 719
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 223/429 (51%), Gaps = 45/429 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G+ G+ +++AIL E + P S+ +P E+
Sbjct: 198 KVVEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPASVEKAADKIPAEI 255
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
P EE R+D RN TIDP A D DDALS+ +L D + VGVHIADV+++V + +
Sbjct: 256 PAEEYAKREDFRNITTLTIDPKDAKDFDDALSVRKLKDNLWEVGVHIADVTHYVTEDSII 315
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S +++ G++ + I
Sbjct: 316 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAYSAIFEMTDKGEIKNSRIVH 375
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI+S + +YE AQ II+ K EG D I L ++KIL
Sbjct: 376 TVIKSDRRFTYEEAQQIIETK----------EG-----------DFKEEILKLDALAKIL 414
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 415 REKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKIGRV 474
Query: 509 ----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
P R H P+ KL F ++ G +L TS S + L+ + K
Sbjct: 475 PKSKKPKVFPYRIHDLPDPEKLDNLSQFIARFGYKLRTSGTKTDVSKSINHLLDDIQGKK 534
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY L+F YTHFTSP+RRYPD++V
Sbjct: 535 EE-----NLIETVSIRAMQKARYSVH-------NIGHYGLSFDYYTHFTSPIRRYPDMLV 582
Query: 620 HRTLNAALE 628
HR L L+
Sbjct: 583 HRLLTKYLD 591
>gi|53715849|ref|YP_101841.1| ribonuclease R [Bacteroides fragilis YCH46]
gi|60683768|ref|YP_213912.1| exoribonuclease [Bacteroides fragilis NCTC 9343]
gi|265764716|ref|ZP_06092991.1| ribonuclease R [Bacteroides sp. 2_1_16]
gi|336407528|ref|ZP_08588025.1| ribonuclease R [Bacteroides sp. 2_1_56FAA]
gi|375360672|ref|YP_005113444.1| putative exoribonuclease [Bacteroides fragilis 638R]
gi|383116347|ref|ZP_09937097.1| ribonuclease R [Bacteroides sp. 3_2_5]
gi|423248016|ref|ZP_17229032.1| ribonuclease R [Bacteroides fragilis CL03T00C08]
gi|423252967|ref|ZP_17233898.1| ribonuclease R [Bacteroides fragilis CL03T12C07]
gi|423259671|ref|ZP_17240594.1| ribonuclease R [Bacteroides fragilis CL07T00C01]
gi|423263354|ref|ZP_17242357.1| ribonuclease R [Bacteroides fragilis CL07T12C05]
gi|423270099|ref|ZP_17249071.1| ribonuclease R [Bacteroides fragilis CL05T00C42]
gi|423272445|ref|ZP_17251392.1| ribonuclease R [Bacteroides fragilis CL05T12C13]
gi|423282684|ref|ZP_17261569.1| ribonuclease R [Bacteroides fragilis HMW 615]
gi|52218714|dbj|BAD51307.1| ribonuclease R [Bacteroides fragilis YCH46]
gi|60495202|emb|CAH10023.1| putative exoribonuclease [Bacteroides fragilis NCTC 9343]
gi|251948396|gb|EES88678.1| ribonuclease R [Bacteroides sp. 3_2_5]
gi|263254100|gb|EEZ25534.1| ribonuclease R [Bacteroides sp. 2_1_16]
gi|301165353|emb|CBW24925.1| putative exoribonuclease [Bacteroides fragilis 638R]
gi|335947432|gb|EGN09223.1| ribonuclease R [Bacteroides sp. 2_1_56FAA]
gi|387775981|gb|EIK38084.1| ribonuclease R [Bacteroides fragilis CL07T00C01]
gi|392657494|gb|EIY51127.1| ribonuclease R [Bacteroides fragilis CL03T12C07]
gi|392660890|gb|EIY54488.1| ribonuclease R [Bacteroides fragilis CL03T00C08]
gi|392699644|gb|EIY92818.1| ribonuclease R [Bacteroides fragilis CL05T00C42]
gi|392707649|gb|EIZ00765.1| ribonuclease R [Bacteroides fragilis CL07T12C05]
gi|392708875|gb|EIZ01977.1| ribonuclease R [Bacteroides fragilis CL05T12C13]
gi|404582252|gb|EKA86947.1| ribonuclease R [Bacteroides fragilis HMW 615]
Length = 714
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/430 (36%), Positives = 224/430 (52%), Gaps = 45/430 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P VL + G+ G+ +++AIL E + P+S+ +P E+
Sbjct: 194 KVTEWPDKAKNPIGQVLDILGKAGDNTTEMHAILAEFGLPY--VYPQSVEKAADKIPAEI 251
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI L DG+ VGVHIADV+++V G+ +
Sbjct: 252 SAEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPLKDGLWEVGVHIADVTHYVKEGSII 311
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS +D+ G+V D I
Sbjct: 312 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSAIFDITEKGEVRDSRIVH 371
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K EG D I L ++K L
Sbjct: 372 TVIESDRRFTYEEAQQIIETK----------EG-----------DFKDEILMLDTIAKAL 410
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRFT GA+ + + F DE G P +D N L EEFMLLAN+T AE I +A
Sbjct: 411 REKRFTAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKIGKA 470
Query: 509 FPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
R H P+ KL F ++ G +L TS S + L+ + K
Sbjct: 471 PKGKKPKVLPYRIHDLPDPEKLDNLAQFIARFGYRLRTSGTKTDVSKSINHLLDDIQGKK 530
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++V
Sbjct: 531 EE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDMMV 578
Query: 620 HRTLNAALEA 629
HR + ++
Sbjct: 579 HRLVTRYMDG 588
>gi|110596746|ref|ZP_01385036.1| VacB and RNase II family 3'-5' exoribonucleases:Ribonuclease R
[Chlorobium ferrooxidans DSM 13031]
gi|110341433|gb|EAT59893.1| VacB and RNase II family 3'-5' exoribonucleases:Ribonuclease R
[Chlorobium ferrooxidans DSM 13031]
Length = 807
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/428 (36%), Positives = 229/428 (53%), Gaps = 43/428 (10%)
Query: 222 QAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 281
QA VL V G G+ +++AI I + F + + + + +++L R D+R+
Sbjct: 270 QAKVLEVLGEAGDSSVEVSAIARSKGIDET-FDKQIVDFASSIREGITEKDLEGRLDIRD 328
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
+FTIDP A D DDALS+E L DG+ R+GVHIADVS++V + LD EA R+TSVY+
Sbjct: 329 KVVFTIDPVDAKDFDDALSVETLEDGLYRIGVHIADVSHYVPENSPLDREALKRATSVYL 388
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ R IPMLP LSEE+ SLNPGVDR+AFS+F+ + + G+V +TVI S + +YE
Sbjct: 389 VDRVIPMLPSRLSEEICSLNPGVDRMAFSVFFTMTAEGEVRKHEFQKTVIHSKRRYAYED 448
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
++I+ G+ ++ D ++ L +S +L++KRF G L E
Sbjct: 449 VEEILKK------------------GKGDYCD---ELQLLDRISVLLREKRFKHGGLDFE 487
Query: 462 NSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS------ALL 515
+ F G P + + R + L EEFMLLAN+ AE + R F ++ +
Sbjct: 488 TEEVRFKLGSKGEPLEVMRKERLGSHRLIEEFMLLANRKVAEYLTRTFKENKKEAQPVIY 547
Query: 516 RRHPAPNMRKLREFEAFCSKHG--LQLDTSSSGQF--HQSLEQAREKLKDDYVLFDILIN 571
R H +P K+ F + G L+L+ G ++L Q +++K V F ++
Sbjct: 548 RVHGSPQQEKVIILSNFVKRFGFDLKLNRGKEGPIVTAKALRQLLQQVKGTNVEF-LVSE 606
Query: 572 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEK 631
R M A Y +GD + GH+ L F YTHFTSP+RRYPDL+VHR L E E
Sbjct: 607 LVLRSMSKAVY--TGD-----NLGHFGLGFEHYTHFTSPIRRYPDLIVHRLL---FEYEG 656
Query: 632 LYWKHRRM 639
L K R++
Sbjct: 657 LRKKRRKI 664
>gi|408369475|ref|ZP_11167256.1| ribonuclease R [Galbibacter sp. ck-I2-15]
gi|407745221|gb|EKF56787.1| ribonuclease R [Galbibacter sp. ck-I2-15]
Length = 729
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/429 (35%), Positives = 227/429 (52%), Gaps = 22/429 (5%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
ELV + EW +++ P V+ V G GE E +++AIL E + F E +
Sbjct: 188 ELVIVELVEWPKKADSPVGKVVEVLGVPGEHETEMHAILAEYGLPYD-FPLEVTHYANGL 246
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
+ +EE+ R+D+R FTIDP A D DDALS E L DG +G+HIADVSY++
Sbjct: 247 DTSITEEEISKRRDMRKVLTFTIDPKDAKDFDDALSFEPLEDGNFEIGIHIADVSYYMDT 306
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
+ L+ EA R+TSVY++ R +PMLP +LS SL P ++ FS + +N+ G ++D+
Sbjct: 307 NSVLEEEAYSRATSVYLVDRVVPMLPEILSNNACSLRPHEEKYTFSAVFKMNNDGQILDK 366
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFDV--ESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
W GRTV S + SYE AQ II+ + ++ + + GE + Q E + + +I L
Sbjct: 367 WFGRTVTYSDARFSYEEAQSIIETQSNIIPKRISLTGEEY-----QVE-TQISDAILKLN 420
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
+V+KI++ +R GA+ + + F ++ P ++ N L EEFMLLAN+ A
Sbjct: 421 DVAKIMRKRRMDAGAISFDKVEVKFDLNDNNEPIGVYFKTSKEANKLIEEFMLLANRKVA 480
Query: 503 EVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--K 560
E I + + + R H P+ KL + + +K G ++D S SL + + K
Sbjct: 481 EYIGKQ-KKTFVYRIHDDPDEEKLMQLQGVIAKFGYRIDMKSKKSLTSSLNSLLDDVQGK 539
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
+ L D L A R M A Y + GHY L F YTHFTSP+RRYPD++VH
Sbjct: 540 KEQNLVDTL---AIRTMSKAIYTTE-------NIGHYGLGFDYYTHFTSPIRRYPDVMVH 589
Query: 621 RTLNAALEA 629
R L L+
Sbjct: 590 RLLQHYLDG 598
>gi|390945738|ref|YP_006409498.1| RNAse R [Alistipes finegoldii DSM 17242]
gi|390422307|gb|AFL76813.1| RNAse R [Alistipes finegoldii DSM 17242]
Length = 743
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/426 (34%), Positives = 214/426 (50%), Gaps = 37/426 (8%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
E V RI +W E S P ++ G G + +++AIL E + F PE +
Sbjct: 191 EKVVVRIADWAEGSKSPVGELVERLGMAGNNDTEMHAILAEYELPYR-FDPEIEQAAEAI 249
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
+ +E+ +R+D R FT+DP+ A D DDALS+ R+ DG+ +GVHIADV+++V P
Sbjct: 250 DGSITAKEIAARRDFRQVTTFTVDPADAKDFDDALSVRRVRDGVWEIGVHIADVTHYVRP 309
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
+ +D EA R TSVY++ R +PMLP LS E+ SL P L FS + LN D+++
Sbjct: 310 QSTIDDEAVERGTSVYLVDRTVPMLPERLSNELCSLRPHETSLCFSAVFTLNENLDILEE 369
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 444
W GRTVI S + +Y AQ++I+ G G D I +L +
Sbjct: 370 WFGRTVIYSDRRFTYAEAQEVIE----------TGRG-----------DYAEEILTLNRL 408
Query: 445 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 504
++ L+ +RF +GA+ + + F DE G P +++ N + EEFMLLAN+ AE
Sbjct: 409 AQALRRQRFKNGAISFDREEVKFKLDETGKPLGVYFKEQKESNQMIEEFMLLANRRVAEF 468
Query: 505 IARAFPDSA-------LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 557
+ D + R H +P+ KL F F + G + + L +
Sbjct: 469 CGKRKTDKGRTVERPMVYRVHDSPSEEKLDRFRQFILRFGHIFKATKGRAIAKELNKLFA 528
Query: 558 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
++K + + A R M A Y + GHY LAFP YTHFTSP+RRYPD+
Sbjct: 529 QIKGT-TEENAVSTMAVRSMAKAYYTTD-------NIGHYGLAFPYYTHFTSPIRRYPDM 580
Query: 618 VVHRTL 623
+VHR L
Sbjct: 581 MVHRLL 586
>gi|119357755|ref|YP_912399.1| ribonuclease R [Chlorobium phaeobacteroides DSM 266]
gi|119355104|gb|ABL65975.1| RNAse R [Chlorobium phaeobacteroides DSM 266]
Length = 791
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 184/544 (33%), Positives = 269/544 (49%), Gaps = 82/544 (15%)
Query: 110 SYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQ 169
S P +R G V S+++R R IVG L ++NR L PD I
Sbjct: 194 STPHQRCEGIVKSVVKR--RVTTIVGTLT---------------RENRRFLLKPDERKI- 235
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
P +VV +K+ + ++G + EL ++++E A VL V
Sbjct: 236 -------LPVIVVALKNAAKA-----KDGQKVLVGEL------DFSKEGVI-NAKVLEVL 276
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 289
G G+ + +++AI + I + F + + + E+L+ R D+R+ +FTIDP
Sbjct: 277 GSAGDSQVEVSAIARNHGIDET-FEAPIVEFAQSIRDGITDEDLVGRLDIRDKLVFTIDP 335
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
A D DDALS+E L+ R+GVHIADVS++V + LD EA R+TSVY++ R IPML
Sbjct: 336 VDAKDFDDALSLETLTGNRYRIGVHIADVSHYVPEDSLLDKEAMKRATSVYLVDRVIPML 395
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P LSE++ SLNPGVDR+AFS+F + AG+V + +T I S + +YE Q I+D
Sbjct: 396 PSRLSEQICSLNPGVDRMAFSVFITMTDAGEVEKQEFQKTAIHSKRRFTYEDVQQILDS- 454
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
GEG D V +K L +S L++KRF G L E + F
Sbjct: 455 ---------GEG-----------DFVAELKLLDTLSTTLREKRFKHGGLDFETEEVRFRL 494
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALLRRHPAPNM 523
G P + + R + L EEFMLLAN+ AE + + F P + R H AP +
Sbjct: 495 GSKGEPLEVMKKERLGSHRLIEEFMLLANRKVAEYLTKTFGEGKKTPQPCIYRVHDAPQL 554
Query: 524 RKLREFEAFCSKHG--LQLDTSSSGQF--HQSLEQAREKLKDDYVLFDILIN-YATRPMQ 578
K+ F + G L+L+ G ++L Q ++++ + F L+N R M
Sbjct: 555 EKVVILSNFVKRLGYDLKLNRGKDGPIVTAKALRQLLQQVRGTNLEF--LVNELVLRSMS 612
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRR 638
A Y +GD + GHY L F YTHFTSP+RRYPDL++HR L E E L ++
Sbjct: 613 KAVY--TGD-----NAGHYGLGFEHYTHFTSPIRRYPDLIIHRLL---FEYESLRKSRKK 662
Query: 639 MLPK 642
+ K
Sbjct: 663 ITEK 666
>gi|225679606|gb|EEH17890.1| cell wall biogenesis protein phosphatase Ssd1 [Paracoccidioides
brasiliensis Pb03]
Length = 1374
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 187/662 (28%), Positives = 298/662 (45%), Gaps = 103/662 (15%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G VV++IER + G +G L +Q K + + A+ S DR+ +
Sbjct: 588 GHVVAVIERVAGQMFSGSLGVLRPSSQATKEKQEAERQARDGSHSRHHHDRQQEKPKIVW 647
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
PT + P + + + P + E A + A I W S P ++
Sbjct: 648 FKPTDKRVPLIAIPTEQAP----RDFVEKHADYANNIFVACIKRWPITSLHPFGTLVEQL 703
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW--EVPQEELLS-RKDLRNFCIFT 286
G G ++ + +A+L +N FS L + W EV E LLS R+D R FT
Sbjct: 704 GAMGNLKVETDALLRDNNFASDEFSDAVLKNVGFENWSVEVEGEALLSSRRDFRYETTFT 763
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP+ +LDDA+ ++ LSDG +G+H+ADV++F+ + +D EA+ R T VY++ R +
Sbjct: 764 IDPNGTKELDDAIHVKTLSDGKVEIGIHVADVAHFIKGNSLVDREAKKRGTGVYLMNRVV 823
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKLSYEHAQD 404
MLP LS E+ SL PG +RL S+ + +N A +V + WIG+ VI+S KL+Y+
Sbjct: 824 NMLPPRLSTEICSLLPGEERLTVSVVFQVNPATGIVEGEPWIGKAVIKSSGKLTYDEVDA 883
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
++ G D+ QL+G V IK+L +++ K+ RF + + R+ + +
Sbjct: 884 VLGGNSDI-----------QLHGV-----TVDDIKTLNDIASKFKEARFGNRSTRIPSLR 927
Query: 465 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 524
++ D+ P + + + L EE AN AE + A P+ ALLRR PN R
Sbjct: 928 LLYQLDDENVPVEHNIFETTPAHELIEELSHKANTFVAEKLVSALPEKALLRRQAPPNFR 987
Query: 525 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYAT-----RPMQL 579
+L+ F ++ G +D++S G SL + + D+ I + MQ
Sbjct: 988 RLQTFVDRMTRLGYDIDSTSRGTLQTSL----------FKIGDVEIRKGMETLLLKAMQR 1037
Query: 580 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRM 639
A Y+ +G D+ HY L P+YTHFTSP RRY D+VVHR L A L
Sbjct: 1038 AKYYVAGSVTDEQRQ-HYVLNLPLYTHFTSPSRRYADIVVHRQLEAVLS----------- 1085
Query: 640 LPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRK 699
G F I + L A CN++K
Sbjct: 1086 ----------NGEFTEDI----------------------------ENLTKTAEQCNNKK 1107
Query: 700 LACRNVKDACVKLYMWILLKKKEV-----LLSEARVLALGPRFMTIYIEKLAIERRIYYD 754
+ +N ++ V + ++ KK L+SE VL + + I + E+R++ D
Sbjct: 1108 DSAQNAQEQSVHIESCRIMDKKRQEIGGDLISEGIVLCVYESAFDVLIPEYGFEKRVHCD 1167
Query: 755 EV 756
++
Sbjct: 1168 QL 1169
>gi|126644165|ref|XP_001388218.1| mitotic control protein dis3 [Cryptosporidium parvum Iowa II]
gi|126117291|gb|EAZ51391.1| mitotic control protein dis3, putative [Cryptosporidium parvum Iowa
II]
Length = 922
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 157/468 (33%), Positives = 243/468 (51%), Gaps = 56/468 (11%)
Query: 200 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 259
+TIE + + IDEW+ S +P H++ V G+ G++E + + IL I S FSP L
Sbjct: 464 STIENQRLVVVIDEWDCSSFYPTGHIVGVLGKAGDLETETSVILRIRDINSSEFSPSVLK 523
Query: 260 CLPCVP----WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS--DGISR--- 310
CLP W+ + + R DLRN +F++DP D+DDALSIE ++ D S+
Sbjct: 524 CLPNNDRNDDWKPNEIDFRDRVDLRNKLVFSVDPPGCKDIDDALSIELINPNDDNSQEKW 583
Query: 311 --VGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 368
V VHIADV++FV P T +D EA RS + Y++ ++I MLP L+ + SL DRL+
Sbjct: 584 YLVSVHIADVTHFVKPNTPIDDEASRRSNTCYLVNKRIDMLPEELTTNICSLVSNKDRLS 643
Query: 369 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 428
F+ W++N ++ + + +T+I S +Y AQ+IID K +
Sbjct: 644 FTCNWEINENAEIRNVYFNKTIINSKYSFTYLQAQNIIDDKCN----------------- 686
Query: 429 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLS---GRED 485
S++ S++ L ++S++L+ R + GA+ L +S+ F+E Y + G+E
Sbjct: 687 --NSEIAISLRRLMKISQVLRKNRISRGAIELSSSEVKVDFEESRNLYQDLNHNDLGKEQ 744
Query: 486 L------------------NFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
+ N + EEFMLLAN + A I FP+ LLRRHP P +L
Sbjct: 745 ISSVILNIKNVYAYNYLNTNSMVEEFMLLANVSVARQIISKFPNCCLLRRHPEPKYDQLE 804
Query: 528 EFEAFCSKHGL-QLDTSSSGQFHQSLEQA--REKLKDDYVLFDILINYATRPMQLASYFC 584
+ + SK G+ +S SL+ E +K + ++ ++ TR M A YF
Sbjct: 805 KLKYVLSKVGISNFTYENSLSLSNSLKNILDSEIIKKNPIIGKLVRILTTRTMNQALYFT 864
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
+ + T HY LA +YTHFTSP+RRY D++VHR L+A++ E L
Sbjct: 865 TCKSVEGT--FHYGLAEEIYTHFTSPIRRYADIIVHRLLSASIGLEPL 910
>gi|194333503|ref|YP_002015363.1| ribonuclease R [Prosthecochloris aestuarii DSM 271]
gi|194311321|gb|ACF45716.1| ribonuclease R [Prosthecochloris aestuarii DSM 271]
Length = 795
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 168/465 (36%), Positives = 242/465 (52%), Gaps = 42/465 (9%)
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
L T+ K+ + L K LP+ I R+++ ++ + V A E+ + +A V+ V
Sbjct: 221 LKRTNRKFVLLPDLKKILPE-ISIRIKDSAGALDGQKVMAGNLEFLKNGSI-RAVVVEVL 278
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDP 289
G G +++AI I + F L + + +E+ R D+R+ +FTIDP
Sbjct: 279 GDAGSSAVEVSAIARGLGIDET-FDDPLLKEVASISDSYTEEDFRDRLDIRDKVVFTIDP 337
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
A D DDALS+E L G R+GVHIADVS++V G LDIEAQ RSTSVY++ R IPML
Sbjct: 338 VDAKDFDDALSLEPLPKGHFRIGVHIADVSHYVKEGNLLDIEAQKRSTSVYLVDRVIPML 397
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P LSEE+ SLNP VDRLAFSIF+ ++ G+V+ +TVI S + +YE I++
Sbjct: 398 PSKLSEEICSLNPKVDRLAFSIFFKMSPQGEVLQHEFQKTVINSKRRFTYEEVDAILNA- 456
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
G+ E+ D +K+L ++S+IL++KR +G L E + F
Sbjct: 457 -----------------GKGEYHD---ELKNLDQISRILREKRLDEGGLEFETQEVRFKL 496
Query: 470 DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS------ALLRRHPAPNM 523
G P + + R + L EEFMLLAN+ AE I+ F + ++ R H +P
Sbjct: 497 GSKGEPVEVIKKERLASHRLIEEFMLLANRKVAEYISTRFAEKGKMAYPSIYREHGSPQE 556
Query: 524 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQA---REKLKDDY-VLFDILIN-YATRPMQ 578
K+ F K G L + G+ + +A R+ LK + + L+N R M
Sbjct: 557 EKVAILANFVKKIGYTLQLTGKGKNGAPVVKAKALRDLLKQVHGTNVEFLVNELVLRSMA 616
Query: 579 LASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
A Y + D GH+ L F YTHFTSP+RRYPDLVVHR L
Sbjct: 617 KAQYTGTSD-------GHFGLGFEHYTHFTSPIRRYPDLVVHRLL 654
>gi|409199123|ref|ZP_11227786.1| RNAse r [Marinilabilia salmonicolor JCM 21150]
Length = 720
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 179/557 (32%), Positives = 262/557 (47%), Gaps = 81/557 (14%)
Query: 87 EKVSSSQQNDGMNAIERLSAMISSYPTKR---PTGRVVSIIERSPRRDGIVGFLNVNQWF 143
E + SQ N G +A+ + Y KR G VV I+ERS RD VG L V+ F
Sbjct: 105 EDIFVSQNNLG-HALNGDRVKVLQYARKRNRQAEGEVVEILERS--RDQFVGTLEVSDNF 161
Query: 144 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 203
+ D++ + +P P+ + G +
Sbjct: 162 AFLVA---DSRVMHHDIFIP------------------------PNQLN-----GGKQGQ 189
Query: 204 MELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
+V I EW E++ P V+ V G G+ +++AIL E + + + +
Sbjct: 190 KAVVC--ITEWPEKAKNPIGKVVDVLGDPGDNNTEMHAILAEFNLPYK-YPEKVVEAAEK 246
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
+ ++P EE+ R+D R FTIDP+ A D DDALS+++L +G VGVHIADV+++V
Sbjct: 247 IQDKLPVEEIKKRRDFRKVTTFTIDPADAKDFDDALSVQKLKNGHWEVGVHIADVTHYVT 306
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
P T LD EA R+TSVY++ R +PMLP LS E+ SL P D+L FS ++++ G V D
Sbjct: 307 PDTILDKEAVSRATSVYLVDRVVPMLPERLSNELCSLRPNEDKLCFSAVFEMDDQGVVFD 366
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
W+GRTVI S + SYE AQ +I+ L +L +
Sbjct: 367 SWVGRTVIHSDRRFSYEEAQSVIEKGEGELKEEIL---------------------TLND 405
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+++ L+ RF+ GA+ E + F DE G P + ++ N L EEFMLLAN+ AE
Sbjct: 406 LAQKLRSIRFSKGAIDFERVEVKFELDEKGKPLNVFFKEAKEANKLIEEFMLLANRRVAE 465
Query: 504 VIAR--AFPDSA---------LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSL 552
+I R P++ + R H P+ K F F K G + S SL
Sbjct: 466 IIGRNELTPENKRSSKNSKTFVYRIHDEPDPEKYESFSKFVRKFGFEAAPKQSETISSSL 525
Query: 553 EQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLR 612
+ +++ +I+ A R M A Y + GHY L F YTHFTSP+R
Sbjct: 526 NRVLGEVQGKKQQ-NIVETLAIRTMSKAVYSTH-------NIGHYGLGFKHYTHFTSPIR 577
Query: 613 RYPDLVVHRTLNAALEA 629
RYPD++VHR L L+
Sbjct: 578 RYPDMMVHRLLQRYLDG 594
>gi|333029457|ref|ZP_08457518.1| ribonuclease R [Bacteroides coprosuis DSM 18011]
gi|332740054|gb|EGJ70536.1| ribonuclease R [Bacteroides coprosuis DSM 18011]
Length = 723
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 150/425 (35%), Positives = 224/425 (52%), Gaps = 35/425 (8%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP 269
++ EW +++ P VL + G+ G + +++AIL E + S + E + E+P
Sbjct: 194 KVIEWPDKAKNPIGEVLDILGKAGNNDTEMHAILAEFGLPYS-YPKEVELFADKISAEIP 252
Query: 270 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 329
++E+ R+D RN FTIDP A D DDALSI +L +G VGVHIADV+++V G +D
Sbjct: 253 KDEIEKREDFRNIATFTIDPKDAKDFDDALSIRQLKNGNWEVGVHIADVTHYVQEGDIID 312
Query: 330 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 389
EA+ R+TS+Y++ R IPMLP L + SL P ++LAFS+ ++L+ AG+V + T
Sbjct: 313 QEAEKRATSIYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFELDEAGEVKHSHVAHT 372
Query: 390 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 449
VI+S + +YE AQ II+ K EG + I L +++ L+
Sbjct: 373 VIKSDRRFTYEEAQAIIESK----------EG-----------EYATEILMLNHLAQELR 411
Query: 450 DKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 509
RF+DGAL E + F DE G P ++ N L EEFMLLAN+T AE + +
Sbjct: 412 KLRFSDGALNFERVEVKFEIDEKGKPISVYFKESKEANKLIEEFMLLANRTVAEKVGKVG 471
Query: 510 PDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTS-SSGQFHQSLEQAREKLKDDYV 564
+ R H P+ KL F ++ G ++ TS S SL E ++
Sbjct: 472 HNKKAKVLPYRIHDLPDPDKLDNLSQFIARFGYKIRTSGSKSTVAHSLNVLLEDIQGKKE 531
Query: 565 LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 624
+++ + R MQ A Y + GHY LAF YTHFTSP+RRYPD++VHR +
Sbjct: 532 A-NLIETISIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRYPDMMVHRLIT 583
Query: 625 AALEA 629
++
Sbjct: 584 RYMDG 588
>gi|380692948|ref|ZP_09857807.1| ribonuclease R [Bacteroides faecis MAJ27]
Length = 718
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 148/430 (34%), Positives = 221/430 (51%), Gaps = 45/430 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G+ G+ +++AIL E + P+++ + +P E+
Sbjct: 197 KVTEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAEI 254
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI + DG+ VGVHIADV+++V G +
Sbjct: 255 TPEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPIKDGLWEVGVHIADVTHYVKEGGII 314
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 315 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVRDSRIVH 374
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K D + L ++K L
Sbjct: 375 TVINSDRRFTYEEAQQIIETK---------------------AGDFKEEVLMLDTIAKAL 413
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 414 REKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKVGRV 473
Query: 509 ----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
P R H P+ KL F ++ G ++ TS S + L+ K
Sbjct: 474 PKNKKPKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDIHGKK 533
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++V
Sbjct: 534 EE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDMMV 581
Query: 620 HRTLNAALEA 629
HR + ++
Sbjct: 582 HRLVTKYMDG 591
>gi|301307807|ref|ZP_07213763.1| ribonuclease R [Bacteroides sp. 20_3]
gi|423339600|ref|ZP_17317340.1| ribonuclease R [Parabacteroides distasonis CL09T03C24]
gi|300834150|gb|EFK64764.1| ribonuclease R [Bacteroides sp. 20_3]
gi|409230254|gb|EKN23121.1| ribonuclease R [Parabacteroides distasonis CL09T03C24]
Length = 728
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/428 (35%), Positives = 223/428 (52%), Gaps = 45/428 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
RI EW +E+ P V+ + G G+ +++AIL E + P S+ +P +
Sbjct: 208 RIVEWPDEAKNPLGEVIDILGIAGQNTAEMHAILAEFGLPYK--YPSSVEKAADKIPEAI 265
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ +R+D R FTIDP A D DDALS RL +G VGVHIADV+++V +
Sbjct: 266 SPEEIENREDFRGITTFTIDPKDAKDFDDALSARRLDNGNWEVGVHIADVTHYVKTDGVI 325
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EAQ R+TSVY++ R IPMLP L ++ SL P ++L FS ++LNS V + I R
Sbjct: 326 DKEAQSRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSAVFELNSDAVVQNSRICR 385
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
T+I+S + +YE AQ++I+ GEG D I +L +++K L
Sbjct: 386 TIIKSDRRFTYEEAQEVIE----------TGEG-----------DYKEEILALNDLAKKL 424
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR- 507
+++RF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 425 RERRFKSGAINFDRYEVKFEIDEQGKPVRVYFKVSKDANKLIEEFMLLANRTVAEFVGRP 484
Query: 508 ---AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
+ + R H P+ K+ F +F + G +L T S + L+ + K
Sbjct: 485 PKGKTKKTFVYRIHELPDPDKMENFASFIRRFGYKLKTDGTKTDVSKGINSLLDNVQGKP 544
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ A R MQ A Y + GHY LAF YTHFTSP+RRYPD++V
Sbjct: 545 EE-----NLIETVAIRAMQKARYSTE-------NIGHYGLAFEYYTHFTSPIRRYPDMMV 592
Query: 620 HRTLNAAL 627
HR L L
Sbjct: 593 HRLLERYL 600
>gi|189499728|ref|YP_001959198.1| ribonuclease R [Chlorobium phaeobacteroides BS1]
gi|189495169|gb|ACE03717.1| ribonuclease R [Chlorobium phaeobacteroides BS1]
Length = 795
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 178/523 (34%), Positives = 257/523 (49%), Gaps = 77/523 (14%)
Query: 112 PTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLT 171
P +R G + +I+RS IVG L + NR PD + I
Sbjct: 198 PHQRCEGLITKVIDRSLH--SIVGTL---------------VRNNRKFTLAPDLKKI--- 237
Query: 172 PTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
P++ V +KD G A+ ++V +D +++ +A VL V G
Sbjct: 238 -----LPEINVRIKD----------SGGASDGQKVVVGNLD--FQKNGVIRAVVLEVLGD 280
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPST 291
G + +++AI I S F E L+ + V + ++ R D+R+ +FTIDP
Sbjct: 281 AGSSQVEVSAIARSKGIDES-FDEELLTYVESVSDHISDADIEGRLDIRDKNVFTIDPVD 339
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
A D DDALSI+ LS G+ R+GVHIADVS++V + LD EAQ R+TSVY++ R IPMLP
Sbjct: 340 AKDFDDALSIQTLSRGLYRIGVHIADVSHYVSEDSPLDREAQKRATSVYLVDRVIPMLPA 399
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
LSE++ SLNPGVDR+AFS+F+ + + G+V+ + +TVI S + +YE Q++
Sbjct: 400 RLSEQICSLNPGVDRMAFSVFFKMKADGEVLQQEFVKTVINSKRRFTYEDVQEV------ 453
Query: 412 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDE 471
L G + Y + D +S L++ R ++G L E + F
Sbjct: 454 ------LNNGKGKYYKELHLLDT---------ISTRLRETRLSEGGLEFETEEVRFKLGS 498
Query: 472 YGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALLRRHPAPNMRK 525
G P + V R + L EEFMLLAN+ AE I+ F ++ R H AP K
Sbjct: 499 KGEPVEVVKKERLGSHRLIEEFMLLANRKVAEYISTKFMLKDKQSQPSIYRVHGAPQEEK 558
Query: 526 LREFEAFCSKHG--LQLDTSSSGQFHQSLEQA-REKLKDDY-VLFDILIN-YATRPMQLA 580
+ F + G L+LD + G + QA R LK + + L+N R M A
Sbjct: 559 VAILTNFVRRIGYTLKLDGKAKGGAPKVSSQALRNLLKQVHGTNVEFLVNELVLRSMAKA 618
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
Y + D GH+ L F YTHFTSP+RRYPDL+VHR L
Sbjct: 619 LYTSAND-------GHFGLGFEHYTHFTSPIRRYPDLMVHRLL 654
>gi|365121736|ref|ZP_09338651.1| ribonuclease R [Tannerella sp. 6_1_58FAA_CT1]
gi|363645023|gb|EHL84303.1| ribonuclease R [Tannerella sp. 6_1_58FAA_CT1]
Length = 717
Score = 243 bits (621), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/436 (35%), Positives = 229/436 (52%), Gaps = 45/436 (10%)
Query: 197 EGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPE 256
+G T E LV+ I EW E + P V+ V G+ G + +++AIL E + + +
Sbjct: 184 KGGKTGEKALVS--ITEWPESAKNPYGEVIAVLGKAGNNDTEMHAILAEFGLPYT-YPKN 240
Query: 257 SLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIA 316
+ + +E+L R+D R FTIDP A D DDALSI +L +G VGVHIA
Sbjct: 241 VERAADKISDILTEEDLKDREDFRGITTFTIDPRDAKDFDDALSIRQLDNGNWEVGVHIA 300
Query: 317 DVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLN 376
DV+++V PG+ +D EA R+TSVY++ R IPMLP L ++ SL P D+L FS ++LN
Sbjct: 301 DVTHYVTPGSVIDKEAYKRATSVYLVDRTIPMLPERLCNQICSLRPDEDKLCFSAIFELN 360
Query: 377 SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVR 436
+V I RTVIRS + +YE AQ+II+ G G D
Sbjct: 361 EKSEVQHSHITRTVIRSDRRFTYEEAQEIIES----------GRG-----------DYSS 399
Query: 437 SIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLL 496
I L ++++ L+++RF++G++ + + F DE G P ++ N L EEFMLL
Sbjct: 400 EILKLNDLAQKLRERRFSEGSINFDRHEVKFEIDENGRPLSVYFKVSKEANKLVEEFMLL 459
Query: 497 ANKTAAEVI--------ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDT-SSSGQ 547
AN+T AE + A+AF + R H P+ K+ F + G L T + GQ
Sbjct: 460 ANRTVAESVGKVDGNRTAKAF----VYRVHDLPDPEKMNTMATFIRRFGYTLRTEGTKGQ 515
Query: 548 FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 607
+S+ + +++ +++ A R M A+Y + GHY LAF YTHF
Sbjct: 516 ISRSINSLLDNIQNK-PEENLIETVAIRTMAKATYSTK-------NIGHYGLAFDYYTHF 567
Query: 608 TSPLRRYPDLVVHRTL 623
TSP+RRYPD++VHR L
Sbjct: 568 TSPIRRYPDMMVHRLL 583
>gi|298374284|ref|ZP_06984242.1| ribonuclease R [Bacteroides sp. 3_1_19]
gi|298268652|gb|EFI10307.1| ribonuclease R [Bacteroides sp. 3_1_19]
Length = 728
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/428 (35%), Positives = 223/428 (52%), Gaps = 45/428 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
RI EW +E+ P V+ + G G+ +++AIL E + P S+ +P +
Sbjct: 208 RIVEWPDEAKNPLGEVIDILGIAGQNTAEMHAILAEFGLPYK--YPSSVEKAADKIPEAI 265
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ +R+D R FTIDP A D DDALS RL +G VGVHIADV+++V +
Sbjct: 266 SPEEIENREDFRGITTFTIDPKDAKDFDDALSARRLDNGNWEVGVHIADVTHYVKTDGVI 325
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EAQ R+TSVY++ R IPMLP L ++ SL P ++L FS ++LNS V + I R
Sbjct: 326 DKEAQSRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSAVFELNSDAVVQNSRICR 385
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
T+I+S + +YE AQ++I+ GEG D I +L +++K L
Sbjct: 386 TIIKSDRRFTYEEAQEVIE----------TGEG-----------DYKEEILALNDLAKKL 424
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR- 507
+++RF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 425 RERRFKSGAINFDRYEVKFEIDEQGKPVRVYFKVSKDANKLIEEFMLLANRTVAEFVGRP 484
Query: 508 ---AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
+ + R H P+ K+ F +F + G +L T S + L+ + K
Sbjct: 485 PKGKTKKTFVYRIHELPDPDKMENFASFIRRFGYKLKTDGTKTDVSKGINSLLDNVQGKP 544
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ A R MQ A Y + GHY LAF YTHFTSP+RRYPD++V
Sbjct: 545 EE-----NLIETVAIRAMQKARYSTE-------NIGHYGLAFEYYTHFTSPIRRYPDMMV 592
Query: 620 HRTLNAAL 627
HR L L
Sbjct: 593 HRLLERYL 600
>gi|194336956|ref|YP_002018750.1| ribonuclease R [Pelodictyon phaeoclathratiforme BU-1]
gi|194309433|gb|ACF44133.1| ribonuclease R [Pelodictyon phaeoclathratiforme BU-1]
Length = 770
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 168/491 (34%), Positives = 252/491 (51%), Gaps = 55/491 (11%)
Query: 159 SLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEES 218
+L+ +R+++ P+++V +++ ++ +G + EL ++++E
Sbjct: 197 TLTKANRKFVLKADDRKILPEIIVPIRNARKAV-----DGQKVLVGEL------DFSKEG 245
Query: 219 PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKD 278
QA VL + G G+ +++AI I + F L + + E+L R D
Sbjct: 246 QI-QAKVLEILGTAGDSAVEVSAIARSRGIDET-FDKPLLDFAASIREGITDEDLKGRLD 303
Query: 279 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 338
+R+ +FTIDP A D DDALSIE L DG ++GVHIADVS++V + LD EA R+TS
Sbjct: 304 IRDKVVFTIDPVDAKDFDDALSIEMLEDGQYKIGVHIADVSHYVPENSPLDREALKRATS 363
Query: 339 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 398
VY++ R IPMLP LSE++ SLNPGVDR+AFS+F L++ G+V +TVI S + +
Sbjct: 364 VYLVDRVIPMLPARLSEQICSLNPGVDRMAFSVFLTLSADGEVRKHEFNKTVIHSKRRFA 423
Query: 399 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 458
YE DVE G+G D V +++L +S +L++KRF G L
Sbjct: 424 YE----------DVEEILKQGKG-----------DFVDELQALDRLSVLLREKRFKHGGL 462
Query: 459 RLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDS 512
E + F G P + + R + L EEFMLLAN+ A+ + + F P
Sbjct: 463 DFETEEVRFKLGSKGEPLEVMKKERLGSHRLIEEFMLLANRKVAKYLTKTFKENKKEPQP 522
Query: 513 ALLRRHPAPNMRKLREFEAFCSKHG--LQLDTSSSGQF--HQSLEQAREKLKDDYVLFDI 568
+ R H AP K+ F + G L+L+ G +L Q +++K + F +
Sbjct: 523 VIYRVHGAPQQEKVLILANFVKRLGFDLKLNRGKEGPIVSASALRQLLQQVKGSNIEF-L 581
Query: 569 LINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
+ R M A Y +GD + GHY L F YTHFTSP+RRYPDL+VHR L E
Sbjct: 582 VSELVLRCMSKAVY--TGD-----NVGHYGLGFEHYTHFTSPIRRYPDLIVHRML---FE 631
Query: 629 AEKLYWKHRRM 639
E L K R++
Sbjct: 632 YENLRKKRRKI 642
>gi|150009927|ref|YP_001304670.1| ribonuclease R [Parabacteroides distasonis ATCC 8503]
gi|149938351|gb|ABR45048.1| ribonuclease R [Parabacteroides distasonis ATCC 8503]
Length = 728
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/428 (35%), Positives = 223/428 (52%), Gaps = 45/428 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
RI EW +E+ P V+ + G G+ +++AIL E + P S+ +P +
Sbjct: 208 RIVEWPDEAKNPLGEVIDILGIAGQNTAEMHAILAEFGLPYK--YPSSVEKAADKIPEAI 265
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ +R+D R FTIDP A D DDALS RL +G VGVHIADV+++V +
Sbjct: 266 SPEEIENREDFRGITTFTIDPKDAKDFDDALSARRLDNGNWEVGVHIADVTHYVKTDGVI 325
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EAQ R+TSVY++ R IPMLP L ++ SL P ++L FS ++LNS V + I R
Sbjct: 326 DKEAQSRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSAVFELNSDAVVQNSRICR 385
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
T+I+S + +YE AQ++I+ GEG D I +L +++K L
Sbjct: 386 TIIKSDRRFTYEEAQEVIE----------TGEG-----------DYKEEILALNDLAKKL 424
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR- 507
+++RF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 425 RERRFKSGAINFDRYEVKFEIDEQGKPVRVYFKVSKDANKLIEEFMLLANRTVAEFVGRP 484
Query: 508 ---AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
+ + R H P+ K+ F +F + G +L T S + L+ + K
Sbjct: 485 PKGKTKKTFVYRIHELPDPDKMENFASFIRRFGYKLKTDGTKTDVSKGINSLLDNVQGKP 544
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ A R MQ A Y + GHY LAF YTHFTSP+RRYPD++V
Sbjct: 545 EE-----NLIETVAIRAMQKARYSTE-------NIGHYGLAFEYYTHFTSPIRRYPDMMV 592
Query: 620 HRTLNAAL 627
HR L L
Sbjct: 593 HRLLERYL 600
>gi|423333672|ref|ZP_17311453.1| ribonuclease R [Parabacteroides distasonis CL03T12C09]
gi|409226982|gb|EKN19884.1| ribonuclease R [Parabacteroides distasonis CL03T12C09]
Length = 727
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/428 (35%), Positives = 223/428 (52%), Gaps = 45/428 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
RI EW +E+ P V+ + G G+ +++AIL E + P S+ +P +
Sbjct: 207 RIVEWPDEAKNPLGEVIDILGIAGQNTAEMHAILAEFGLPYK--YPSSVEKAADKIPEAI 264
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ +R+D R FTIDP A D DDALS RL +G VGVHIADV+++V +
Sbjct: 265 SPEEIENREDFRGITTFTIDPKDAKDFDDALSARRLDNGNWEVGVHIADVTHYVKTDGVI 324
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EAQ R+TSVY++ R IPMLP L ++ SL P ++L FS ++LNS V + I R
Sbjct: 325 DKEAQSRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSAVFELNSDAVVQNSRICR 384
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
T+I+S + +YE AQ++I+ GEG D I +L +++K L
Sbjct: 385 TIIKSDRRFTYEEAQEVIE----------TGEG-----------DYKEEILALNDLAKKL 423
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR- 507
+++RF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 424 RERRFKSGAINFDRYEVKFEIDEQGKPVRVYFKISKDANKLIEEFMLLANRTVAEFVGRP 483
Query: 508 ---AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
+ + R H P+ K+ F +F + G +L T S + L+ + K
Sbjct: 484 PKGKTKKTFVYRIHELPDPDKMENFASFIRRFGYKLKTDGTKTDVSKGINSLLDNVQGKP 543
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ A R MQ A Y + GHY LAF YTHFTSP+RRYPD++V
Sbjct: 544 EE-----NLIETVAIRAMQKARYSTE-------NIGHYGLAFEYYTHFTSPIRRYPDMMV 591
Query: 620 HRTLNAAL 627
HR L L
Sbjct: 592 HRLLERYL 599
>gi|255012826|ref|ZP_05284952.1| ribonuclease R [Bacteroides sp. 2_1_7]
gi|410102247|ref|ZP_11297174.1| ribonuclease R [Parabacteroides sp. D25]
gi|409238969|gb|EKN31757.1| ribonuclease R [Parabacteroides sp. D25]
Length = 728
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/428 (35%), Positives = 223/428 (52%), Gaps = 45/428 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
RI EW +E+ P V+ + G G+ +++AIL E + P S+ +P +
Sbjct: 208 RIVEWPDEAKNPLGEVIDILGIAGQNTAEMHAILAEFGLPYK--YPSSVEKAADKIPEAI 265
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ +R+D R FTIDP A D DDALS RL +G VGVHIADV+++V +
Sbjct: 266 SPEEIENREDFRGITTFTIDPKDAKDFDDALSARRLDNGNWEVGVHIADVTHYVKTDGVI 325
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EAQ R+TSVY++ R IPMLP L ++ SL P ++L FS ++LNS V + I R
Sbjct: 326 DKEAQSRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSAVFELNSDAVVQNSRICR 385
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
T+I+S + +YE AQ++I+ GEG D I +L +++K L
Sbjct: 386 TIIKSDRRFTYEEAQEVIE----------TGEG-----------DYKEEILALNDLAKKL 424
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR- 507
+++RF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 425 RERRFKSGAINFDRYEVKFEIDEQGKPVRVYFKVSKDANKLIEEFMLLANRTVAEFVGRP 484
Query: 508 ---AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
+ + R H P+ K+ F +F + G +L T S + L+ + K
Sbjct: 485 PKGKTKKTFVYRIHELPDPDKMENFASFIRRFGYKLKTDGTKTDVSKGINSLLDNVQGKP 544
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ A R MQ A Y + GHY LAF YTHFTSP+RRYPD++V
Sbjct: 545 EE-----NLIETVAIRAMQKARYSTE-------NIGHYGLAFEYYTHFTSPIRRYPDMMV 592
Query: 620 HRTLNAAL 627
HR L L
Sbjct: 593 HRLLERYL 600
>gi|313149833|ref|ZP_07812026.1| ribonuclease R [Bacteroides fragilis 3_1_12]
gi|313138600|gb|EFR55960.1| ribonuclease R [Bacteroides fragilis 3_1_12]
Length = 714
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 155/434 (35%), Positives = 224/434 (51%), Gaps = 53/434 (12%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P VL + G+ G+ +++AIL E + P+S+ +P E+
Sbjct: 194 KVTEWPDKAKNPIGQVLDILGKAGDNTTEMHAILAEFGLPY--VYPQSVEKAADKIPAEI 251
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI L +G+ VGVHIADV+++V G+ +
Sbjct: 252 SAEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPLKNGLWEVGVHIADVTHYVKEGSII 311
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS +D+ G+V D I
Sbjct: 312 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSAIFDITEKGEVRDSRIVH 371
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K EG D I L ++K L
Sbjct: 372 TVIESDRRFTYEEAQQIIETK----------EG-----------DFKDEILMLDTIAKAL 410
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI--- 505
++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I
Sbjct: 411 REKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKIGKV 470
Query: 506 -----ARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQA 555
A+ P R H P+ KL F ++ G +L TS S + L+
Sbjct: 471 PKGKKAKVLP----YRIHDLPDPEKLDNLAQFIARFGYRLRTSGTKTDVSKSINHLLDDI 526
Query: 556 REKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYP 615
+ K ++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+P
Sbjct: 527 QGKKEE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFP 574
Query: 616 DLVVHRTLNAALEA 629
D++VHR + ++
Sbjct: 575 DMMVHRLVTKYMDG 588
>gi|327350656|gb|EGE79513.1| exosome complex exonuclease exoribonuclease [Ajellomyces
dermatitidis ATCC 18188]
Length = 1039
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 188/561 (33%), Positives = 274/561 (48%), Gaps = 68/561 (12%)
Query: 84 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 143
D E V + ++ + R + ++ +PT RVV I++R+ W
Sbjct: 351 DEKEAVVTEKERRALQEEVRKAHGTTAEGRPQPTARVVGIVKRN--------------WR 396
Query: 144 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 203
Y G K + + S ++ + + P + PK+ + + + +R+
Sbjct: 397 QYVGNIDKISSGTQEQ-SGRRQQTVFVIPMDKRIPKIRIRTRQARELFGQRI-------- 447
Query: 204 MELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLS 259
L+ +D W+ +S +P H + G +G E E A+L E + F L
Sbjct: 448 --LIT--VDAWDRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPQMVLD 499
Query: 260 CLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 313
CLP W+VPQ RKDLR+ + +IDP D+DDAL L +G VGV
Sbjct: 500 CLPPEGHNWKVPQNMDDPGWRDRKDLRDLLVCSIDPPGCQDIDDALHARPLPNGNFEVGV 559
Query: 314 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 373
HIADVS+FV P T +D EA +R T+VY++ ++I MLP+LL ++ SL P V R AFS W
Sbjct: 560 HIADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVQRYAFSNIW 619
Query: 374 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 433
++ + +VV ++VI S SYE AQ ID K + +
Sbjct: 620 EMTPSAEVVSSTCTKSVILSREAFSYEQAQLRIDDKSKTD-------------------E 660
Query: 434 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFE 491
+ S+++L +++K+LK KR GAL L + + D E P V + D N L E
Sbjct: 661 LTESMRTLLKLAKLLKQKRMDAGALNLASPEVRIETDSELSDPMTDVKTKALLDTNSLVE 720
Query: 492 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQFHQ 550
EFML AN T A I ++FP +ALLRRH P E A S K + LD SSS
Sbjct: 721 EFMLHANTTVAAKIFKSFPQTALLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLALAT 780
Query: 551 SLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
SL++ + F+ L+ ATR M A YFC+G ++++ HY LA +YTHFTS
Sbjct: 781 SLDRCVDPANP---FFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASTIYTHFTS 836
Query: 610 PLRRYPDLVVHRTLNAALEAE 630
P+RRY DLVVHR L AA+ E
Sbjct: 837 PIRRYADLVVHRQLAAAIGYE 857
>gi|256838702|ref|ZP_05544212.1| ribonuclease R [Parabacteroides sp. D13]
gi|256739621|gb|EEU52945.1| ribonuclease R [Parabacteroides sp. D13]
Length = 727
Score = 243 bits (620), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/428 (35%), Positives = 223/428 (52%), Gaps = 45/428 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
RI EW +E+ P V+ + G G+ +++AIL E + P S+ +P +
Sbjct: 207 RIVEWPDEAKNPLGEVIDILGIAGQNTAEMHAILAEFGLPYK--YPSSVEKAADKIPEAI 264
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ +R+D R FTIDP A D DDALS RL +G VGVHIADV+++V +
Sbjct: 265 SPEEIENREDFRGITTFTIDPKDAKDFDDALSARRLDNGNWEVGVHIADVTHYVKTDGVI 324
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EAQ R+TSVY++ R IPMLP L ++ SL P ++L FS ++LNS V + I R
Sbjct: 325 DKEAQSRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSAVFELNSDAVVQNSRICR 384
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
T+I+S + +YE AQ++I+ GEG D I +L +++K L
Sbjct: 385 TIIKSDRRFTYEEAQEVIE----------TGEG-----------DYKEEILALNDLAKKL 423
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR- 507
+++RF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 424 RERRFKSGAINFDRYEVKFEIDEQGKPVRVYFKISKDANKLIEEFMLLANRTVAEFVGRP 483
Query: 508 ---AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
+ + R H P+ K+ F +F + G +L T S + L+ + K
Sbjct: 484 PKGKTKKTFVYRIHELPDPDKMENFASFIRRFGYKLKTDGTKTDVSKGINSLLDNVQGKP 543
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ A R MQ A Y + GHY LAF YTHFTSP+RRYPD++V
Sbjct: 544 EE-----NLIETVAIRAMQKARYSTE-------NIGHYGLAFEYYTHFTSPIRRYPDMMV 591
Query: 620 HRTLNAAL 627
HR L L
Sbjct: 592 HRLLERYL 599
>gi|424665659|ref|ZP_18102695.1| ribonuclease R [Bacteroides fragilis HMW 616]
gi|404573912|gb|EKA78663.1| ribonuclease R [Bacteroides fragilis HMW 616]
Length = 714
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 223/430 (51%), Gaps = 45/430 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P VL + G+ G+ +++AIL E + P+S+ +P E+
Sbjct: 194 KVTEWPDKAKNPIGQVLDILGKAGDNTTEMHAILAEFGLPY--VYPQSVEKAADKIPAEI 251
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI L DG+ VGVHIADV+++V G+ +
Sbjct: 252 SAEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPLKDGLWEVGVHIADVTHYVKEGSII 311
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS +D+ G+V D I
Sbjct: 312 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSAIFDITEKGEVRDSRIVH 371
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K EG D I L ++K L
Sbjct: 372 TVIESDRRFTYEEAQQIIETK----------EG-----------DFKDEILMLDTIAKAL 410
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I +A
Sbjct: 411 REKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKIGKA 470
Query: 509 FPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
R H P+ KL F ++ G +L TS S + L+ + K
Sbjct: 471 PKGKKAKVLPYRIHDLPDPEKLDNLAQFIARFGYRLRTSGTKTDVSKSINHLLDDIQGKK 530
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++V
Sbjct: 531 EE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDFYTHFTSPIRRFPDMMV 578
Query: 620 HRTLNAALEA 629
HR + ++
Sbjct: 579 HRLVTKYMDG 588
>gi|160891706|ref|ZP_02072709.1| hypothetical protein BACUNI_04161 [Bacteroides uniformis ATCC 8492]
gi|270295199|ref|ZP_06201400.1| ribonuclease R [Bacteroides sp. D20]
gi|317478234|ref|ZP_07937400.1| ribonuclease R [Bacteroides sp. 4_1_36]
gi|156859113|gb|EDO52544.1| ribonuclease R [Bacteroides uniformis ATCC 8492]
gi|270274446|gb|EFA20307.1| ribonuclease R [Bacteroides sp. D20]
gi|316905627|gb|EFV27415.1| ribonuclease R [Bacteroides sp. 4_1_36]
Length = 714
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 150/428 (35%), Positives = 225/428 (52%), Gaps = 43/428 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP 269
++ EW +++ P V+ + GR G+ +++AIL E + + +P E+
Sbjct: 194 KVVEWPDKAKNPIGQVIDILGRAGDNTTEMHAILAEFGLPYV-YPAAVEKAADKIPAEIS 252
Query: 270 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 329
EE+ R+D R FTIDP A D DDALSI +L G+ VGVHIADV+++V G +D
Sbjct: 253 AEEIARREDFRGVTTFTIDPKDAKDFDDALSIRKLKGGLWEVGVHIADVTHYVKEGGIID 312
Query: 330 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 389
EA+ R+TSVY++ R IPMLP L + SL P ++LA+S+ +++ G+V + + T
Sbjct: 313 KEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFEMTEKGEVKNSRVVHT 372
Query: 390 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 449
VI+S + +YE AQ+II+ G+G D + L +++KIL+
Sbjct: 373 VIKSDRRFTYEEAQEIIE----------TGKG-----------DFQEEVLQLDKLAKILR 411
Query: 450 DKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA- 508
+ RF GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 412 ENRFKAGAINFDRYEVKFEIDEKGKPVSVYFKESKDANKLIEEFMLLANRTVAEKIGRVP 471
Query: 509 -FPDSALL--RRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKLK 560
+ +L R H P+ KL F ++ G +L TS S + L+ + K +
Sbjct: 472 KGKKAKVLPYRIHDLPDPEKLDNLAQFIARFGYKLRTSGTKTDISKSINHLLDDIQGKKE 531
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
+ +++ + R MQ A Y + GHY LAF YTHFTSP+RRYPD++VH
Sbjct: 532 E-----NLIETVSIRAMQKARYSVH-------NVGHYGLAFDYYTHFTSPIRRYPDMMVH 579
Query: 621 RTLNAALE 628
R L L+
Sbjct: 580 RLLTKYLD 587
>gi|423281396|ref|ZP_17260307.1| ribonuclease R [Bacteroides fragilis HMW 610]
gi|404583100|gb|EKA87783.1| ribonuclease R [Bacteroides fragilis HMW 610]
Length = 714
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 155/430 (36%), Positives = 223/430 (51%), Gaps = 45/430 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P VL + G+ G+ +++AIL E + P+S+ +P E+
Sbjct: 194 KVTEWPDKAKNPIGQVLDILGKAGDNTTEMHAILAEFGLPY--VYPQSVEKAADKIPAEI 251
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI L DG+ VGVHIADV+++V G+ +
Sbjct: 252 SAEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPLKDGLWEVGVHIADVTHYVKEGSII 311
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS +D+ G+V D I
Sbjct: 312 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSAIFDITEKGEVRDSRIVH 371
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K EG D I L ++K L
Sbjct: 372 TVIESDRRFTYEEAQQIIETK----------EG-----------DFKDEILMLDTIAKAL 410
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I +A
Sbjct: 411 REKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKIGKA 470
Query: 509 FPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
R H P+ KL F ++ G +L TS S + L+ + K
Sbjct: 471 PKGKKAKVLPYRIHDLPDPEKLDNLAQFIARFGYRLRTSGTKTDVSKSINHLLDDIQGKK 530
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++V
Sbjct: 531 EE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDMMV 578
Query: 620 HRTLNAALEA 629
HR + ++
Sbjct: 579 HRLVTKYMDG 588
>gi|327403544|ref|YP_004344382.1| ribonuclease R [Fluviicola taffensis DSM 16823]
gi|327319052|gb|AEA43544.1| ribonuclease R [Fluviicola taffensis DSM 16823]
Length = 718
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 170/502 (33%), Positives = 245/502 (48%), Gaps = 51/502 (10%)
Query: 139 VNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL--- 195
V N KGGSR + + + V RE Q T + K L+ PD+ K +
Sbjct: 126 VRVALNKKGGSRPEGR----VIEVVSRERTQFVGTIQMFDKHAFLI---PDNTKTGVKIY 178
Query: 196 ---EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 252
E+ + + +I W + + FP V+ G + ++ +IL I
Sbjct: 179 IPFEKLNKAKNKDKALVKITVWPKSAEFPFGEVIQTLGGNSLHDNEMISILIGQGIPIE- 237
Query: 253 FSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
F + ++ V E+ E+ R+D R FTIDP+ A D DDALSI +L +G +G
Sbjct: 238 FEADVMNEAEQVTLELDPVEVAKRRDFREILTFTIDPADAKDFDDALSIRKLENGHLEIG 297
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVS +V P +A+D EA R SVY++ R IPMLP LS V SL P D+ FS
Sbjct: 298 VHIADVSQYVKPDSAMDKEALRRGNSVYLVDRVIPMLPEQLSNMVCSLRPKEDKFTFSAV 357
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
++L+ G + + W G+TVI S + +YE AQ+I++G EG +
Sbjct: 358 FELDENGKMYNEWFGKTVIHSDHRFAYEDAQEILEG----------AEGPYK-------- 399
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE 492
+ L +++KI + +RF GAL + + + F DE P D V+ +D + L EE
Sbjct: 400 ---EELHILDKIAKIYRKERFKQGALMINSEEIRFKLDENKEPIDVVVKVSKDAHQLIEE 456
Query: 493 FMLLANKTAAEVIARAF----PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQF 548
FMLLANK A + P + R H P+ K+ F F K G L+ +S +
Sbjct: 457 FMLLANKRVAMFVGAPQKGKDPVPFVYRIHDKPDPEKIALFGLFLDKFGYSLEFTSPEKA 516
Query: 549 HQSLEQARE--KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTH 606
QS+ + +LK++Y I+ A R M A+Y D + GHY LAF Y H
Sbjct: 517 AQSINKLLNDIRLKNEY---SIIQQMAIRSMAKATY-------DTDNIGHYGLAFQYYGH 566
Query: 607 FTSPLRRYPDLVVHRTLNAALE 628
FTSP+RRY DL+VHR L LE
Sbjct: 567 FTSPIRRYADLMVHRILLECLE 588
>gi|410096552|ref|ZP_11291539.1| ribonuclease R [Parabacteroides goldsteinii CL02T12C30]
gi|409226516|gb|EKN19425.1| ribonuclease R [Parabacteroides goldsteinii CL02T12C30]
Length = 726
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 155/431 (35%), Positives = 234/431 (54%), Gaps = 46/431 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
RI EW +E+ P V+ + G G+ +++AIL E + + PE++ + +
Sbjct: 205 RIVEWPDEAKNPLGEVVDILGVAGQNTAEMHAILAEFGLPYT--YPENVEKAANKISEII 262
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
P+EE+ R+D R FTIDP A D DDALS+ +L +G VGVHIADV+++V P + +
Sbjct: 263 PEEEIAKREDFRKVLTFTIDPKDAKDFDDALSVRQLDNGNWEVGVHIADVTHYVKPESLI 322
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L ++ SL P ++L FS ++L+ +V IGR
Sbjct: 323 DREAESRATSVYLVDRTIPMLPERLCNQICSLRPDEEKLCFSAIFELDEEANVKKSRIGR 382
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI+S + +YE AQ +I+ GEG ++ D + + +L +K L
Sbjct: 383 TVIKSDRRFTYEEAQLVIE----------TGEG--------DYKDEILVLDAL---AKKL 421
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRF +GA+ + + F DE G P + + +D N L EEFMLLAN+T AE + +
Sbjct: 422 REKRFKNGAVNFDRFEVRFEIDETGKPISTYIKESKDANKLIEEFMLLANRTVAEFVGKV 481
Query: 509 ----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS------LEQAREK 558
+ + R H P+ KL F AF + G ++ T S + S L++ +K
Sbjct: 482 PKGKTKKTFVYRIHDLPDPDKLENFAAFIRRFGYKMKTEGSSKIDISRNLNRLLDEVHDK 541
Query: 559 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
++ +++ A R MQ A Y + GHY LAF YTHFTSP+RRYPD++
Sbjct: 542 PEE-----NLIETLAIRSMQKARYTTE-------NIGHYGLAFEYYTHFTSPIRRYPDMM 589
Query: 619 VHRTLNAALEA 629
VHR L LE
Sbjct: 590 VHRLLERYLEG 600
>gi|126275931|ref|XP_001387162.1| 3'-5' exoribonuclease required for 3 end formation of 5.8S rRNA
[Scheffersomyces stipitis CBS 6054]
gi|126213031|gb|EAZ63139.1| 3'-5' exoribonuclease required for 3 end formation of 5.8S rRNA
[Scheffersomyces stipitis CBS 6054]
Length = 989
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 193/554 (34%), Positives = 273/554 (49%), Gaps = 68/554 (12%)
Query: 100 AIERLSAMISSYPTKR---PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN 156
A E L A SS ++ PT RVV I+ RS W Y G +
Sbjct: 361 AQEALKATSSSAGVQKRLQPTARVVGIMRRS--------------WRYYVG------QIA 400
Query: 157 RSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNE 216
SS+S D T K ++++ K LP I+ R + + +V +D W
Sbjct: 401 PSSVSSDD------TGNASKSCFVILMDKVLP-KIRIRTRKAKEFLGQRIVVV-VDSWPA 452
Query: 217 ESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLP--CVPWEVPQ---- 270
+S +P H + G E + A+L E+ + FS L CLP W VP
Sbjct: 453 DSRYPNGHFVRTLGEIESAEAETEALLLEHDVEYRPFSKNVLDCLPEEGDNWVVPDLVNT 512
Query: 271 --EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
+L R DLR+ + +IDP D+DDAL + L +G VGVHIADV++FV P TAL
Sbjct: 513 DDPKLKKRVDLRDKLVCSIDPPNCVDIDDALHAKPLPNGNYEVGVHIADVTHFVKPNTAL 572
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D E R TSVY++ ++I MLP+LL + SL P VDR AFS+ W+L+ ++V +
Sbjct: 573 DQEGASRGTSVYLVDKRIDMLPMLLGTNLCSLKPYVDRFAFSVIWELDDNANIVKVEYMK 632
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
+VI+S SYE AQ ID K + ++ S++ L ++SK L
Sbjct: 633 SVIKSREAFSYERAQTRIDDKSQTD-------------------ELTESMRILLKLSKKL 673
Query: 449 KDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 507
K +R GAL L + + V + E P + + + N L EEFMLLAN + A I
Sbjct: 674 KQQRLDAGALNLASPEVKVHMDSETSDPNEVEIKKLLETNSLVEEFMLLANISVARKIYD 733
Query: 508 AFPDSALLRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYV 564
++P +A+LRRH PA N +L + + K GL + SS SL++ E +D Y
Sbjct: 734 SYPQTAMLRRHAPPPATNFEQLNDMLS-VRKPGLSISLESSRALADSLDRC-EDPQDPY- 790
Query: 565 LFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
F+ L+ +TR M A YF SG + ++ HY LA +YTHFTSP+RRY D+V HR L
Sbjct: 791 -FNTLLRIMSTRCMMAAEYFSSGSYG-YPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQL 848
Query: 624 NAALEAEKLYWKHR 637
A+ E L HR
Sbjct: 849 AGAIGYENLDLSHR 862
>gi|298207271|ref|YP_003715450.1| exoribonuclease [Croceibacter atlanticus HTCC2559]
gi|83849907|gb|EAP87775.1| putative exoribonuclease [Croceibacter atlanticus HTCC2559]
Length = 735
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 222/431 (51%), Gaps = 22/431 (5%)
Query: 206 LVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP 265
+V +++W E++ P V+ V G GE E +I+AIL + + F E +
Sbjct: 189 MVVVELEDWPEKADSPFGRVIEVLGVPGEHETEIHAILAQYGLPHE-FPKEVEEFANKID 247
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
+ + E+ R+D+R+ FTIDP A D DDALS + L +G VG+HIADVS+++ PG
Sbjct: 248 TSIQESEIKKRRDMRDTLTFTIDPKDAKDFDDALSFKILENGHYEVGIHIADVSHYLKPG 307
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
T LD EA R+TSVY++ R +PMLP +LS SL P ++ FS ++++ + ++W
Sbjct: 308 TILDDEAYERATSVYLVDRVVPMLPEVLSNNACSLRPNEEKYTFSAVFEIDENSKIHNQW 367
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD--VVRSIKSLYE 443
G+TV S + +YE AQ II ES +T L G+ +D + +I + +
Sbjct: 368 FGKTVTYSDARFAYEEAQAII------ESKSTSIPADVSLTGKAYKTDDAIADAILKMDK 421
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
V+KI++ KR GA+ + + F +E P +D N L EE+MLLANK AE
Sbjct: 422 VAKIMRRKRMGQGAISFDKVEVKFELNEANEPVGVFFKTSKDANKLIEEYMLLANKKVAE 481
Query: 504 VIARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK-- 560
I + P + R H PN KL + + G L+ S QSL + + +
Sbjct: 482 FIGKQDPKKTFVYRCHDEPNSDKLSALQNLVGRFGYTLNFKSRKTTTQSLNKLLQDVNGT 541
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
+ L D L R M A Y + GHY LAF Y+HFTSP+RRYPD++ H
Sbjct: 542 KEQNLIDTL---TIRTMSKAYYSTE-------NIGHYGLAFDYYSHFTSPIRRYPDVMAH 591
Query: 621 RTLNAALEAEK 631
R L L+ K
Sbjct: 592 RLLQYYLDKGK 602
>gi|239611100|gb|EEQ88087.1| exosome complex exonuclease exoribonuclease [Ajellomyces
dermatitidis ER-3]
Length = 1037
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 188/561 (33%), Positives = 274/561 (48%), Gaps = 68/561 (12%)
Query: 84 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 143
D E V + ++ + R + ++ +PT RVV I++R+ W
Sbjct: 349 DEKEAVVTEKERRALQEEVRKAHGKTAEGRPQPTARVVGIVKRN--------------WR 394
Query: 144 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 203
Y G K + + S ++ + + P + PK+ + + + +R+
Sbjct: 395 QYVGNIDKISSGTQEQ-SGRRQQTVFVIPMDKRIPKIRIRTRQARELFGQRI-------- 445
Query: 204 MELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLS 259
L+ +D W+ +S +P H + G +G E E A+L E + F L
Sbjct: 446 --LIT--VDAWDRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPQMVLD 497
Query: 260 CLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 313
CLP W+VPQ RKDLR+ + +IDP D+DDAL L +G VGV
Sbjct: 498 CLPPEGHNWKVPQNMDDPGWRDRKDLRDLLVCSIDPPGCQDIDDALHARPLPNGNFEVGV 557
Query: 314 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 373
HIADVS+FV P T +D EA +R T+VY++ ++I MLP+LL ++ SL P V R AFS W
Sbjct: 558 HIADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVQRYAFSNIW 617
Query: 374 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 433
++ + +VV ++VI S SYE AQ ID K + +
Sbjct: 618 EMTPSAEVVSSTCTKSVILSREAFSYEQAQLRIDDKSKTD-------------------E 658
Query: 434 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFE 491
+ S+++L +++K+LK KR GAL L + + D E P V + D N L E
Sbjct: 659 LTESMRTLLKLAKLLKQKRMDAGALNLASPEVRIETDSELSDPMTDVKTKALLDTNSLVE 718
Query: 492 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQFHQ 550
EFML AN T A I ++FP +ALLRRH P E A S K + LD SSS
Sbjct: 719 EFMLHANTTVAAKIFKSFPQTALLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLALAT 778
Query: 551 SLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
SL++ + F+ L+ ATR M A YFC+G ++++ HY LA +YTHFTS
Sbjct: 779 SLDRCVDPANP---FFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASTIYTHFTS 834
Query: 610 PLRRYPDLVVHRTLNAALEAE 630
P+RRY DLVVHR L AA+ E
Sbjct: 835 PIRRYADLVVHRQLAAAIGYE 855
>gi|261205888|ref|XP_002627681.1| exosome complex exonuclease exoribonuclease [Ajellomyces
dermatitidis SLH14081]
gi|239592740|gb|EEQ75321.1| exosome complex exonuclease exoribonuclease [Ajellomyces
dermatitidis SLH14081]
Length = 1039
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 188/561 (33%), Positives = 274/561 (48%), Gaps = 68/561 (12%)
Query: 84 DSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWF 143
D E V + ++ + R + ++ +PT RVV I++R+ W
Sbjct: 351 DEKEAVVTEKERRALQEEVRKAHGKTAEGRPQPTARVVGIVKRN--------------WR 396
Query: 144 NYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIE 203
Y G K + + S ++ + + P + PK+ + + + +R+
Sbjct: 397 QYVGNIDKISSGTQEQ-SGRRQQTVFVIPMDKRIPKIRIRTRQARELFGQRI-------- 447
Query: 204 MELVAARIDEWNEESPFPQAHVLHVFG----RGGEVEPQINAILYENAICCSGFSPESLS 259
L+ +D W+ +S +P H + G +G E E A+L E + F L
Sbjct: 448 --LIT--VDAWDRDSRYPTGHFVRSLGELETKGAETE----ALLLEYDVQYRPFPQMVLD 499
Query: 260 CLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 313
CLP W+VPQ RKDLR+ + +IDP D+DDAL L +G VGV
Sbjct: 500 CLPPEGHNWKVPQNMDDPGWRDRKDLRDLLVCSIDPPGCQDIDDALHARPLPNGNFEVGV 559
Query: 314 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 373
HIADVS+FV P T +D EA +R T+VY++ ++I MLP+LL ++ SL P V R AFS W
Sbjct: 560 HIADVSHFVKPNTPMDTEASMRGTTVYLVDKRIDMLPMLLGTDLCSLKPHVQRYAFSNIW 619
Query: 374 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 433
++ + +VV ++VI S SYE AQ ID K + +
Sbjct: 620 EMTPSAEVVSSTCTKSVILSREAFSYEQAQLRIDDKSKTD-------------------E 660
Query: 434 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLS-GREDLNFLFE 491
+ S+++L +++K+LK KR GAL L + + D E P V + D N L E
Sbjct: 661 LTESMRTLLKLAKLLKQKRMDAGALNLASPEVRIETDSELSDPMTDVKTKALLDTNSLVE 720
Query: 492 EFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCS-KHGLQLDTSSSGQFHQ 550
EFML AN T A I ++FP +ALLRRH P E A S K + LD SSS
Sbjct: 721 EFMLHANTTVAAKIFKSFPQTALLRRHATPPPSNFEELIAQLSKKRNMTLDVSSSLALAT 780
Query: 551 SLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
SL++ + F+ L+ ATR M A YFC+G ++++ HY LA +YTHFTS
Sbjct: 781 SLDRCVDPANP---FFNTLVRILATRCMTSAEYFCAGAHA-ESEFRHYGLASTIYTHFTS 836
Query: 610 PLRRYPDLVVHRTLNAALEAE 630
P+RRY DLVVHR L AA+ E
Sbjct: 837 PIRRYADLVVHRQLAAAIGYE 857
>gi|67598415|ref|XP_666217.1| mitotic control protein dis3 [Cryptosporidium hominis TU502]
gi|54657170|gb|EAL35988.1| mitotic control protein dis3 [Cryptosporidium hominis]
Length = 637
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 242/468 (51%), Gaps = 56/468 (11%)
Query: 200 ATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS 259
+TIE + + IDEW+ S +P H++ V G+ G++E + + IL I S FSP L
Sbjct: 179 STIENQRLVVVIDEWDCSSFYPTGHIVGVLGKAGDLETETSVILRIRDINSSEFSPSVLK 238
Query: 260 CLPCVP----WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS--DGISR--- 310
CLP W+ + + R DLR +F++DP D+DDALSIE ++ D S+
Sbjct: 239 CLPNHDRNDDWKPNEIDFRDRVDLRKKLVFSVDPPGCKDIDDALSIELINPNDDNSQENW 298
Query: 311 --VGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 368
V VHIADV++FV P T +D EA RS + Y++ ++I MLP L+ + SL DRL+
Sbjct: 299 YLVSVHIADVTHFVKPNTPIDDEASRRSNTCYLVNKRIDMLPEELTTNICSLVSNKDRLS 358
Query: 369 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 428
F+ W++N ++ + + +T+I S +Y AQ+IID K +
Sbjct: 359 FTCNWEINENAEIRNVYFNKTIINSKYSFTYLQAQNIIDDKCN----------------- 401
Query: 429 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLS---GRED 485
S++ S++ L ++S++L+ R + GA+ L +S+ F+E Y + G+E
Sbjct: 402 --NSEIAISLRRLMKISQVLRKNRISRGAIELSSSEVKVDFEESRNLYQDLNHNDLGKEQ 459
Query: 486 L------------------NFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
+ N + EEFMLLAN + A I FP+ LLRRHP P +L
Sbjct: 460 ISSVILNIKNVYAYNYLNTNSMVEEFMLLANVSVARQIVSKFPNCCLLRRHPEPKYDQLE 519
Query: 528 EFEAFCSKHGL-QLDTSSSGQFHQSLEQA--REKLKDDYVLFDILINYATRPMQLASYFC 584
+ + SK G+ +S SL+ E +K + ++ ++ TR M A YF
Sbjct: 520 KLKHVLSKVGISNFTYENSLSLSNSLKNILDSEIIKKNPIIGKLVRILTTRTMNQALYFT 579
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
+ + T HY LA +YTHFTSP+RRY D++VHR L+A++ E L
Sbjct: 580 TCKSVEGT--FHYGLAEEIYTHFTSPIRRYADIIVHRLLSASIGLEPL 625
>gi|225012542|ref|ZP_03702978.1| ribonuclease R [Flavobacteria bacterium MS024-2A]
gi|225003519|gb|EEG41493.1| ribonuclease R [Flavobacteria bacterium MS024-2A]
Length = 717
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 160/432 (37%), Positives = 230/432 (53%), Gaps = 25/432 (5%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
E V A + +W E+ P ++ G+ GE E +I+AIL+E + F E +
Sbjct: 181 EKVVAVLKDWQEKRESPSGRIIKSLGQPGEKETEIHAILHEYGLPYE-FPKEIEEAAEKI 239
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
++ Q+E+ R+D R+ FTIDP TA D DDALS + LS+G+ VG+HIADVSY+V P
Sbjct: 240 KKDLDQKEIKKRRDFRDVLTFTIDPITAKDFDDALSFKTLSNGLFEVGIHIADVSYYVQP 299
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
T LD EA R+TSVY++ R +PMLP +LS + SL P ++ FS + LN G V +
Sbjct: 300 NTILDQEAYDRATSVYLVDRVVPMLPEVLSNGLCSLRPKEEKFTFSAVFILNIEGTVQEE 359
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDG-KFDVESSNTL-GEGWPQLYGQFEWSDVVRSIKSLY 442
W GRTVI S + SYE QD+++ K V+SS +L G+ + +V ++I L
Sbjct: 360 WYGRTVINSDYRFSYEEVQDVLENQKAQVDSSVSLTGKTY------ILPDNVFKAINILD 413
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
+K L+ +R +GA+ + + F D+ P +D + L EEFMLLANK A
Sbjct: 414 FQAKKLRSQRMKNGAISFDRVEVNFHLDDENNPESVYFKTSKDAHKLIEEFMLLANKKVA 473
Query: 503 EVIARAFPDSALL-RRHPAPNMRKLREFEAFCSKHGLQLDTSS---SGQFHQSLEQAREK 558
I + P + R H P+ +KL + S G + + S + + L K
Sbjct: 474 GFINKIQPLPPFVYRTHDDPDEQKLFNLKQTISPFGYSFNPNKKNVSSEINGLLLACNGK 533
Query: 559 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
+ + L D L R M A Y S D + GHY LAF YTHFTSP+RRYPD++
Sbjct: 534 KEQN--LIDTL---TLRCMSKAEY--STD-----NIGHYGLAFSHYTHFTSPIRRYPDVM 581
Query: 619 VHRTLNAALEAE 630
VHR L L+ +
Sbjct: 582 VHRLLQTYLDKK 593
>gi|423304593|ref|ZP_17282592.1| ribonuclease R [Bacteroides uniformis CL03T00C23]
gi|423310293|ref|ZP_17288277.1| ribonuclease R [Bacteroides uniformis CL03T12C37]
gi|392682489|gb|EIY75834.1| ribonuclease R [Bacteroides uniformis CL03T12C37]
gi|392684043|gb|EIY77375.1| ribonuclease R [Bacteroides uniformis CL03T00C23]
Length = 714
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 150/428 (35%), Positives = 225/428 (52%), Gaps = 43/428 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP 269
++ EW +++ P V+ + GR G+ +++AIL E + + +P E+
Sbjct: 194 KVVEWPDKAKNPIGQVIDILGRAGDNTTEMHAILAEFGLPYV-YPAAVEKAADKIPAEIS 252
Query: 270 QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALD 329
EE+ R+D R FTIDP A D DDALSI +L G+ VGVHIADV+++V G +D
Sbjct: 253 AEEIARREDFRGVTTFTIDPKDAKDFDDALSIRKLKGGLWEVGVHIADVTHYVKEGGIID 312
Query: 330 IEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRT 389
EA+ R+TSVY++ R IPMLP L + SL P ++LA+S+ +++ G+V + + T
Sbjct: 313 KEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFEMTEKGEVKNSRVVHT 372
Query: 390 VIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILK 449
VI+S + +YE AQ+II+ G+G D + L +++KIL+
Sbjct: 373 VIKSDRRFTYEEAQEIIE----------TGKG-----------DFQEEMLQLDKLAKILR 411
Query: 450 DKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA- 508
+ RF GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 412 ENRFKAGAINFDRYEVKFEIDEKGKPVSVYFKESKDANKLIEEFMLLANRTVAEKIGRVP 471
Query: 509 -FPDSALL--RRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKLK 560
+ +L R H P+ KL F ++ G +L TS S + L+ + K +
Sbjct: 472 KGKKAKVLPYRIHDLPDPEKLDNLAQFIARFGYKLRTSGTKTDISKSINHLLDDIQGKKE 531
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
+ +++ + R MQ A Y + GHY LAF YTHFTSP+RRYPD++VH
Sbjct: 532 E-----NLIETVSIRAMQKARYSVH-------NVGHYGLAFDYYTHFTSPIRRYPDMMVH 579
Query: 621 RTLNAALE 628
R L L+
Sbjct: 580 RLLTKYLD 587
>gi|386819388|ref|ZP_10106604.1| ribonuclease R [Joostella marina DSM 19592]
gi|386424494|gb|EIJ38324.1| ribonuclease R [Joostella marina DSM 19592]
Length = 729
Score = 242 bits (617), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 155/446 (34%), Positives = 233/446 (52%), Gaps = 34/446 (7%)
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
E GD I I +W +++ P ++ V G+ GE + +I+AIL E + + F
Sbjct: 185 EHGDKVI------VEIIDWPKDADSPNGKIVQVLGKPGEHDTEIHAILAEYGLPYN-FPE 237
Query: 256 ESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHI 315
E + + +EE+ R+D+R+ FTIDP A D DDALS + L DG VG+HI
Sbjct: 238 EVEHYANKLDTSITKEEIAKRRDMRDVPTFTIDPKDAKDFDDALSFQVLEDGNFEVGIHI 297
Query: 316 ADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDL 375
ADVS+++ + L+ EA R+TSVY++ R +PMLP +LS SL P ++L FS + +
Sbjct: 298 ADVSHYIDLDSVLEEEAYNRATSVYLVDRVVPMLPEILSNNACSLRPNEEKLTFSAVFKM 357
Query: 376 NSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ-FEWSD- 433
N V+D+W GRTV S + +YE AQ +I E+ N L G+ +E +
Sbjct: 358 NKDAQVLDKWFGRTVTYSDRRFAYEEAQAMI------ENQNNSVPADVSLTGESYEVENH 411
Query: 434 VVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEF 493
+ +I +L E++K+++ +R + GA+ + + F ++ P +D N L EEF
Sbjct: 412 IAEAIITLDEMAKLMRGRRLSAGAISFDKVEVKFELNDKSEPIGVYFKTTKDANKLIEEF 471
Query: 494 MLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLE 553
MLLAN+ AE I + + + R H P+ KL + SK G +D S SL
Sbjct: 472 MLLANRKVAEFIGKQ-KKTFVYRVHDEPDDEKLMLLQGVISKFGYSIDMKSKKAVTSSLN 530
Query: 554 QAREKLK--DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPL 611
E+++ + L D L R M A Y + GHY LAF YTHFTSP+
Sbjct: 531 ALLEEVQGTKEQNLVDTL---TIRTMSKAVYTTD-------NIGHYGLAFDYYTHFTSPI 580
Query: 612 RRYPDLVVHRTLN------AALEAEK 631
RRYPD++VHR L A+++AEK
Sbjct: 581 RRYPDVMVHRLLQHYLDGGASVDAEK 606
>gi|74000899|ref|XP_535520.2| PREDICTED: DIS3 mitotic control homolog (S. cerevisiae)-like [Canis
lupus familiaris]
Length = 885
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 169/539 (31%), Positives = 269/539 (49%), Gaps = 67/539 (12%)
Query: 238 QINAILYENAICC--SGFSPESLSCLPCVPWEVPQEELLSRKDLR-NFCIFTIDPSTATD 294
QI A + C SG E P PW+V EE RKDLR +F+IDP D
Sbjct: 256 QIEAFVRLQGASCKDSGSMCEMPVNTPGNPWKVSPEEERERKDLRETHLVFSIDPKGCED 315
Query: 295 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 354
+DD LS+ L++G +GVHIADV++FV P + +D EA+ R+T+ Y+ R+ MLP +LS
Sbjct: 316 VDDTLSVRTLANGSLELGVHIADVTHFVPPSSYIDTEARTRATTYYLADRRYDMLPSILS 375
Query: 355 EEVGSLNPGVDRLAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVE 413
++ SL GVDR A S+ W+L+ ++ ++ + W GRT+IRS KL YE AQ+++DG
Sbjct: 376 ADLCSLLGGVDRYAVSVIWELDRTSYEIKNVWFGRTIIRSAYKLFYEAAQELLDGNV--- 432
Query: 414 SSNTLGEGWPQLYG------QFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVF 467
T+ E P+L Q + ++V ++ L ++++ ++ KR GAL LE +
Sbjct: 433 ---TVVEDIPELKNLDTKSRQAKLEELVWALGKLTDIARHIRAKRDRCGALELEGVEVRV 489
Query: 468 LFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLR 527
DE +D + +++ E M+LAN A I +FP ALLR+HP P+
Sbjct: 490 QLDEKKNIHDLIPKQPLEVHETVAECMILANHWVARKIWESFPHQALLRQHPPPHQEFFS 549
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 587
E G +DT S+ SL+ A + +D ++ +L + AT+ M A YF +G
Sbjct: 550 ELRECAKAKGFFIDTRSNKTLADSLDNAND--PNDPIVNRLLRSMATQAMSNALYFSTGS 607
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHRE 647
++ ++ HY LA YTHFTSP+RRY D+VVHR L AA+ +K +M K+N
Sbjct: 608 CAEE-EFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDK------KMEIKDN--- 657
Query: 648 GVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKD 707
+ +KD E + H N+R A ++ +
Sbjct: 658 ---------LLSNKDLEE-------------------------LCRHINNRNRAAQHSQK 683
Query: 708 ACVKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+L+ + K K E +S+ + ++ + ++I + I+ Y +GL++
Sbjct: 684 QSTELFQCMYFKDKDPENEERCISDGVIYSIRTNGVLVFIPRFGIKGAAYLRNKDGLVI 742
>gi|344202636|ref|YP_004787779.1| ribonuclease R [Muricauda ruestringensis DSM 13258]
gi|343954558|gb|AEM70357.1| ribonuclease R [Muricauda ruestringensis DSM 13258]
Length = 727
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 150/442 (33%), Positives = 226/442 (51%), Gaps = 24/442 (5%)
Query: 193 KRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 252
K+ +GD V + +W +++ P V+ V G+ GE +I+AIL E + +
Sbjct: 182 KKANDGDK------VLVSLGDWPDDADSPYGEVIEVLGKPGEHNTEIHAILAEYGLP-NE 234
Query: 253 FSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
F E + + + E+ R+D+R+ FTIDP A D DDALS ++L +G +G
Sbjct: 235 FPYEVEEFAKTLDTSIKESEIAKRRDMRDVLTFTIDPKDAKDFDDALSFQKLENGNYEIG 294
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
+HIADVS++V P + L+ EA R+TSVY++ R +PMLP +LS + SL P ++ FS
Sbjct: 295 IHIADVSHYVQPDSILEEEAYDRATSVYLVDRVVPMLPEVLSNKACSLRPNEEKYTFSAV 354
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
++++ +V +W GRT I S + +YE AQ II + E + E +
Sbjct: 355 FEMDDNAKLVKQWFGRTAINSNERFAYEEAQHII----ETEQNKIPKEISIREKAYSVSD 410
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE 492
DVV ++ + ++KI++ R GA+ + + F E P +D N L EE
Sbjct: 411 DVVEAVLTFDRLAKIMRQARMDAGAISFDKIEVKFHLSENNEPVGVYFKEAKDANKLIEE 470
Query: 493 FMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSL 552
FMLLAN+ AE I + + + R H P+ KL S+ G ++ +QSL
Sbjct: 471 FMLLANRKVAEFIGKQ-KKTFVYRVHDKPDEDKLMALNGVISRFGHSINLKDPKSINQSL 529
Query: 553 EQARE--KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSP 610
+ E K K + L D L A R M A Y + GHY L F YTHFTSP
Sbjct: 530 NKLLEDVKGKKEQNLVDTL---AIRSMSKAIYTTE-------NIGHYGLGFEYYTHFTSP 579
Query: 611 LRRYPDLVVHRTLNAALEAEKL 632
+RRYPD++VHR L L+ EK+
Sbjct: 580 IRRYPDVMVHRLLQHYLDKEKI 601
>gi|120437635|ref|YP_863321.1| ribonuclease R [Gramella forsetii KT0803]
gi|117579785|emb|CAL68254.1| ribonuclease R [Gramella forsetii KT0803]
Length = 732
Score = 241 bits (616), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/431 (33%), Positives = 226/431 (52%), Gaps = 24/431 (5%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V +EW +++ P + V G GE +I++IL + + F E +
Sbjct: 188 VVVEFEEWPKKADSPLGKITRVLGTPGEHHTEIHSILAQYGLPHD-FPEEVEEFANKIDT 246
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+ +EE+ R+D+R+ FTIDP A D DDALS E+L +G +G+HIADVS+++ PGT
Sbjct: 247 SINKEEISKRRDMRDVLTFTIDPKDAKDFDDALSFEKLKNGNYEIGIHIADVSHYLQPGT 306
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R +PMLP +LS SL P ++ FS ++++ V ++W
Sbjct: 307 ILDEEAYERATSVYLVDRVVPMLPEILSNNACSLRPKEEKFTFSAVFEIDDNATVKNQWF 366
Query: 387 GRTVIRSCCKLSYEHAQDIID-GKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 445
GRTV S + +YE AQ I++ G + ++ + G ++ ++ +L ++
Sbjct: 367 GRTVTYSDERFAYEEAQHILETGTGTIPDDVSIRNHAYSVRGA-----LIEAVVTLNTLA 421
Query: 446 KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI 505
K ++ +R DGA+ + + F +E P +D N L EEFMLLAN+ AE I
Sbjct: 422 KKMRTRRMKDGAISFDKVEVKFNLNEDNNPVGVFFKTAKDANKLIEEFMLLANRKVAEYI 481
Query: 506 ARAFPDSALL-RRHPAPNMRKLREFEAFCSKHGLQLD----TSSSGQFHQSLEQAREKLK 560
+ P + R H P+ +KL + + G +L+ +S++ ++ LE + + +
Sbjct: 482 GKQSPKKTFVYRNHDEPDDQKLASLQTIVGRFGHKLNLKDRSSTTSSLNKLLEDVQGRKE 541
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
+ V D L A R M A Y GHY LAF YTHFTSP+RRYPD++VH
Sbjct: 542 QNMV--DTL---AIRTMSKAYYGTES-------IGHYGLAFDYYTHFTSPIRRYPDVMVH 589
Query: 621 RTLNAALEAEK 631
R L L+ K
Sbjct: 590 RLLQHYLDGAK 600
>gi|29348486|ref|NP_811989.1| ribonuclease R [Bacteroides thetaiotaomicron VPI-5482]
gi|298385815|ref|ZP_06995372.1| ribonuclease R [Bacteroides sp. 1_1_14]
gi|29340390|gb|AAO78183.1| ribonuclease R [Bacteroides thetaiotaomicron VPI-5482]
gi|298261043|gb|EFI03910.1| ribonuclease R [Bacteroides sp. 1_1_14]
Length = 718
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/430 (34%), Positives = 220/430 (51%), Gaps = 45/430 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G G+ +++AIL E + P+++ + +P E+
Sbjct: 197 KVTEWPDKAKNPIGQVIDILGVAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAEI 254
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI + DG+ VGVHIADV+++V G +
Sbjct: 255 TPEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPIKDGLWEVGVHIADVTHYVKEGGII 314
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 315 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVRDSRIVH 374
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K D + L ++K L
Sbjct: 375 TVINSDRRFTYEEAQQIIETK---------------------TGDFKEEVLMLDTIAKAL 413
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 414 REKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKVGRV 473
Query: 509 ----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
P R H P+ KL F ++ G ++ TS S + L+ K
Sbjct: 474 PKNKKPKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDIHGKK 533
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++V
Sbjct: 534 EE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDMMV 581
Query: 620 HRTLNAALEA 629
HR + ++
Sbjct: 582 HRLVTKYMDG 591
>gi|405120418|gb|AFR95189.1| mitotic control protein dis3 [Cryptococcus neoformans var. grubii
H99]
Length = 1002
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 257/538 (47%), Gaps = 79/538 (14%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL----- 170
PTGRVV I++R+ W Y +RSSLS D + L
Sbjct: 382 PTGRVVGIVKRN--------------WRAYV------CHLDRSSLS--DSAFTSLAQQTV 419
Query: 171 --TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
TP P++ + + P ++++ + ID W+ S +P H +
Sbjct: 420 FATPLSRALPRIRLRTRQAPQLVEQK------------ILVTIDNWSPTSRYPDGHFVRA 467
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEEL-----LSRKDLRN 281
G+ E + ++L E + F L+CLP W VP++++ R+DLR
Sbjct: 468 LGKVASKEAEQESLLLEYEVPYRPFGKAILNCLPPEGDSWVVPKKDMECLEWRDREDLRG 527
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL RL +G GVHIADVS+FV P +D EA R T+VY+
Sbjct: 528 LDICSIDPPGCQDIDDALHARRLPNGNIEAGVHIADVSHFVHPDNPMDSEAASRGTTVYL 587
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ ++I MLP LL + SL P V+RLAFS+ W+LN +VVD ++VI S +YE
Sbjct: 588 VDKRIDMLPSLLGTNLCSLRPFVERLAFSVIWELNEDAEVVDIRFVKSVIASKEAFTYEA 647
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ D K S N + SI+ L ++ LK R GAL L
Sbjct: 648 AQLRKDDK----SMN---------------DPLTNSIRLLNHLAIKLKAARMRAGALSLS 688
Query: 462 NS--KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH- 518
+ K E P + + N L EEFMLLAN A+ I FP +A+LRRH
Sbjct: 689 SPELKIHLASSESTEPINVEQKKLLETNSLVEEFMLLANIWVAKKIQEVFPATAVLRRHS 748
Query: 519 --PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATR 575
P N L++ + G+ LD S+S SL+ + + F+ L+ ATR
Sbjct: 749 PPPKTNFEVLQDI--LMKRKGITLDVSTSKALADSLDACVIAGEPE---FNTLVRIMATR 803
Query: 576 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
M A YFCSG ++ +GHY LA P+YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 804 CMLSAEYFCSGSVSKES-YGHYGLASPIYTHFTSPIRRYADVLAHRQLAAAINYTPLH 860
>gi|189346025|ref|YP_001942554.1| ribonuclease R [Chlorobium limicola DSM 245]
gi|189340172|gb|ACD89575.1| ribonuclease R [Chlorobium limicola DSM 245]
Length = 791
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 161/470 (34%), Positives = 244/470 (51%), Gaps = 45/470 (9%)
Query: 222 QAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRN 281
QA VL + G G+ +++AI + I + F E ++ + + ++L +R D+R+
Sbjct: 269 QARVLEILGSAGDSRVEVSAIARNHGIDET-FDEELINFAGAIKEGITDDDLKNRLDIRD 327
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
+FTIDP A D DDALSIE L D + R+GVHIADVS++V + LD EA R+TSVY+
Sbjct: 328 KNVFTIDPVDAKDFDDALSIETLDDNLYRIGVHIADVSHYVPENSPLDREAMKRATSVYL 387
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ R IPMLP LSE+V SLNPGVDR+AFS+F + +G+V + +TVI S + +YE
Sbjct: 388 VDRVIPMLPSRLSEQVCSLNPGVDRMAFSVFITMTESGEVREHAFHKTVIHSKRRYTYED 447
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
Q+I+ GEG D ++ L ++S L+++RF G L E
Sbjct: 448 VQEIL----------LKGEG-----------DNAAELQLLEKISVQLREERFRHGGLDFE 486
Query: 462 NSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALL 515
+ F G P + + R + L EEFMLLAN+ AE + + F P +
Sbjct: 487 TEEVRFRLGSKGEPVEVIKKERLSSHRLIEEFMLLANRKVAEYLTKTFRERKKNPQPVIY 546
Query: 516 RRHPAPNMRKLREFEAFCSKHG--LQLDTSSSGQF--HQSLEQAREKLKDDYVLFDILIN 571
R H AP ++ F K G L+++ +G ++L Q +++ V F L+N
Sbjct: 547 RVHDAPQQERVLVLANFVRKIGYTLKINREKTGPIVSAKALRQLLQQVHGSNVEF--LVN 604
Query: 572 -YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
R M A Y D + GH+ L F YTHFTSP+RRYPDL+VHR L E E
Sbjct: 605 ELVLRCMSKAIY-------TDENTGHFGLGFEHYTHFTSPIRRYPDLIVHRLL---FEYE 654
Query: 631 KLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKY 680
L + +++ K + R + I +++ + RE++ + ++Y
Sbjct: 655 NLRNRKKKITDKRLAELSEKIRVTSRISNEREKSAVEAERESIKLKQVEY 704
>gi|375144261|ref|YP_005006702.1| ribonuclease R [Niastella koreensis GR20-10]
gi|361058307|gb|AEV97298.1| ribonuclease R [Niastella koreensis GR20-10]
Length = 699
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 159/452 (35%), Positives = 228/452 (50%), Gaps = 51/452 (11%)
Query: 187 LPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYEN 246
+P++ ++GD I RI EW E+ P V+ + G E + + IL EN
Sbjct: 115 IPETALNGAKDGDRVI------VRITEW-EKQKKPVGAVIQIMEAGNEGDMAMKEILMEN 167
Query: 247 AICCSGFSPES-LSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS 305
F PE+ + +P + +E+ R+D+R FTIDP A D DDALSI L
Sbjct: 168 GFPL--FFPENVIEETERIPDTISPDEIKLRRDVREVLTFTIDPVDARDFDDALSIRLLK 225
Query: 306 DGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVD 365
+G+ +GVHIADVS+FV P TALD EA R+TSVY+ R PMLP +S E+ SL P D
Sbjct: 226 NGLYEIGVHIADVSHFVEPDTALDKEAYDRATSVYLPDRVAPMLPERISNELCSLRPHED 285
Query: 366 RLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQL 425
+L FS + + AG++ W+G+TVI S + +YE Q+II+ GEG Q
Sbjct: 286 KLTFSAIFQITDAGEISQYWLGKTVIHSDHRFTYEEVQEIIEK----------GEGLYQ- 334
Query: 426 YGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRED 485
I L ++++ + KRF GA+ + + F DE G P ++ ++
Sbjct: 335 ----------GEILLLNKLAQQFRAKRFNKGAINFSSQEVRFKLDETGKPIGIMVKESKE 384
Query: 486 LNFLFEEFMLLANKTAAEVIARAFPDSALL----RRHPAPNMRKLREFEAFCSKHGLQLD 541
+ L EEFMLLAN+ AE + + + L R H P+ +KL F F K+G D
Sbjct: 385 AHQLIEEFMLLANRIVAENVGKVKVNKKDLPFPYRVHDTPDEQKLAPFVEFAKKYGHTFD 444
Query: 542 TSS----SGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHY 597
TS+ + F+Q L+ + K + +L R M A Y + GHY
Sbjct: 445 TSTPEGIAASFNQMLQDVQGKPEQ-----HVLEQLGIRTMAKAIYTTE-------NIGHY 492
Query: 598 ALAFPVYTHFTSPLRRYPDLVVHRTLNAALEA 629
L F Y HFTSP+RRYPD++VHR L L+
Sbjct: 493 GLGFKQYCHFTSPIRRYPDVMVHRILQDVLKG 524
>gi|321263374|ref|XP_003196405.1| nucleolar exosome component, involved in rRNA processing and RNA
degradation; Dis3p [Cryptococcus gattii WM276]
gi|317462881|gb|ADV24618.1| Nucleolar exosome component, involved in rRNA processing and RNA
degradation, putative; Dis3p [Cryptococcus gattii WM276]
Length = 1002
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 182/538 (33%), Positives = 255/538 (47%), Gaps = 79/538 (14%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQL----- 170
PTGRVV I++R+ W Y +RSSLS D + L
Sbjct: 382 PTGRVVGIVKRN--------------WRAYV------CHLDRSSLS--DSAFTSLAQQTV 419
Query: 171 --TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
TP P++ + + P + ++ + ID W S +P H +
Sbjct: 420 FATPLSRALPRIRLRTRQAPQLVDQK------------ILVTIDNWYPTSRYPDGHFVRA 467
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEEL-----LSRKDLRN 281
G+ E + ++L E + F L+CLP W VP++++ R+DLR
Sbjct: 468 LGKVASKEAEQESLLLEYEVPYRPFGKAILNCLPPEGDNWVVPKKDMECLEWRDREDLRG 527
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
I +IDP D+DDAL RL +G GVHIADVS+FV P +D EA R T+VY+
Sbjct: 528 LDICSIDPPGCQDIDDALHARRLPNGNIEAGVHIADVSHFVHPDNPMDSEAASRGTTVYL 587
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
+ ++I MLP LL + SL P V+RLAFS+ W+LN +VVD ++VI S +YE
Sbjct: 588 VDKRIDMLPSLLGTNLCSLRPFVERLAFSVIWELNEDAEVVDVRFVKSVIASKEAFTYEA 647
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
AQ D K S N + SI+ L ++ LK R GAL L
Sbjct: 648 AQLRKDDK----SMN---------------DQLTNSIRLLNHLAIKLKAARMRAGALSLS 688
Query: 462 NS--KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH- 518
+ K E P + + N L EEFMLLAN A+ I FP +A+LRRH
Sbjct: 689 SPELKIHLASSESAEPINVEQKKLLETNSLVEEFMLLANIWVAKKIQEVFPATAVLRRHS 748
Query: 519 --PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATR 575
P N L++ + G+ LD S+S SL+ + + F+ L+ ATR
Sbjct: 749 PPPKTNFEVLQDI--LIKRKGIALDVSTSKALADSLDACVIAGEPE---FNTLVRIMATR 803
Query: 576 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
M A YFCSG ++ +GHY LA P+YTHFTSP+RRY D++ HR L AA+ L+
Sbjct: 804 CMLSAEYFCSGSVSKES-YGHYGLASPIYTHFTSPIRRYADVLAHRQLAAAINYTPLH 860
>gi|190346539|gb|EDK38643.2| hypothetical protein PGUG_02741 [Meyerozyma guilliermondii ATCC
6260]
Length = 978
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 178/492 (36%), Positives = 252/492 (51%), Gaps = 43/492 (8%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
VVL+ + I+ R + + +V +D W S PQ H + G E +
Sbjct: 405 FVVLMDKVLPKIRIRTRKATDLLGKRIVVV-VDSWPSTSKHPQGHFVRSLGDVESAEAET 463
Query: 240 NAILYENAICCSGFSPESLSCLP--CVPWEVPQE------ELLSRKDLRNFCIFTIDPST 291
A+L E+ + FS L CLP W+VP+ +L RKDLR+ + +IDP
Sbjct: 464 EALLLEHDVEYRPFSKNVLDCLPKEGANWKVPETLNMADGQLAQRKDLRDKLVCSIDPPG 523
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
D+DDAL +L +G VGVHIADV++FV P TALD E R TSVY++ ++I MLP+
Sbjct: 524 CVDIDDALHARKLPNGNYEVGVHIADVTHFVKPNTALDQEGASRGTSVYLVDKRIDMLPM 583
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
LL + SL P VDR AFS+ W+L+ ++V+ +++I+S SYE AQ ID K
Sbjct: 584 LLGTNLCSLKPYVDRFAFSVIWELDQNAEIVNVDYMKSIIKSREAFSYEQAQLRIDDK-- 641
Query: 412 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFD 470
S N ++ +S++ L ++SK LK KR GAL L + + V +
Sbjct: 642 --SQN---------------DELTQSMRILLKLSKKLKQKRLDAGALNLASPEVKVHMDS 684
Query: 471 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRKLR 527
E P + + + N L EEFML AN + A I A+P +A+LRRH PA N L
Sbjct: 685 ETSDPGEVEIKKLLETNSLVEEFMLFANISVARKIYDAYPQTAMLRRHAPPPATNFEALN 744
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 586
E K G+ + SS SL++ E D Y F+ L+ +TR M A YF SG
Sbjct: 745 EM-LRVRKKGMSISLESSKALADSLDRC-EDPNDPY--FNTLLRIMSTRCMMAAEYFPSG 800
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR-----RMLP 641
+ ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR ++
Sbjct: 801 SY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHRDKTKMELIV 859
Query: 642 KNNHREGVRGRF 653
KN +R +F
Sbjct: 860 KNINRRHRNAQF 871
>gi|399217299|emb|CCF73986.1| unnamed protein product [Babesia microti strain RI]
Length = 893
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 158/450 (35%), Positives = 232/450 (51%), Gaps = 43/450 (9%)
Query: 190 SIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC 249
+IK R+ + +E + + +I +W +S P + + + G G V+ + AIL EN+I
Sbjct: 375 NIKTRMSK---ELEGKRITVKIADWPADSKRPNGYWVRILGDIGHVDVETWAILIENSIT 431
Query: 250 CSGFSPESLSCLPCVPWEV-PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGI 308
FS + LP W PQ + D ++DP TD+DDALS +++ + +
Sbjct: 432 VDEFSDSAHKELPLSSWIAEPQSGRIEWTD----TTVSVDPPGCTDIDDALSYKKIENNL 487
Query: 309 SRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 368
R+GVHIADVS+FV G+ALD+EA R +VY++ R+ MLP LL+ + SL V R A
Sbjct: 488 -RIGVHIADVSHFVKDGSALDMEASKRCNTVYLVDRRHEMLPELLTSNICSLRSNVHRYA 546
Query: 369 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 428
FS+ W ++ G+++D +++I S L+YE A II G V
Sbjct: 547 FSVIWTMDLEGNILDTKFTKSIICSSASLTYEQAHQIIQGHISVS--------------- 591
Query: 429 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT-----PYDSVLSGR 483
S+V S+ L E+S L+ KR GAL L +++ F +DE PY +
Sbjct: 592 ---SEVKESLTGLLEISAKLRQKRIEKGALELASAEVSFDYDESSQIRGLRPYKLYPT-- 646
Query: 484 EDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGL-QLDT 542
N + EEFMLLAN + A+ + FP ++RRHP P + KL E G QL
Sbjct: 647 ---NQMVEEFMLLANTSVAKKLTNTFP-CTIIRRHPLPQLDKLEELNNTLKSCGFGQLRY 702
Query: 543 SSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFP 602
++S + ++SL+ K + IL +TR M A Y S D +W HY L
Sbjct: 703 NNSKELNESLQNISRKHPHIERILRIL---STRCMSQAVYSNSKDVP-RLEWHHYGLCVD 758
Query: 603 VYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
VYTHFTSP+RRY D++VHR L AALE +
Sbjct: 759 VYTHFTSPIRRYADILVHRLLEAALEISTI 788
>gi|403157686|ref|XP_003307080.2| hypothetical protein PGTG_00030 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375163515|gb|EFP74074.2| hypothetical protein PGTG_00030 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1075
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 184/543 (33%), Positives = 262/543 (48%), Gaps = 68/543 (12%)
Query: 100 AIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSS 159
I + S + T +PTGRVV +I R+ W Y
Sbjct: 411 TISKTSKKTGAGTTSQPTGRVVGVITRN--------------WRPY-------------- 442
Query: 160 LSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKK-RLEEGDA-TIEMELVAARIDEWNEE 217
+ DR I ++ V L S+ K R+ A T+ + + ID W
Sbjct: 443 VCHIDRASIPISALQSSLSAHAVFAMPLSRSVPKIRIRTRQASTLANQKILVSIDRWEPS 502
Query: 218 SPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELLS 275
S +P+ H + G + + ++L E+ I F L CLP W VP++ +
Sbjct: 503 SRYPEGHFVRALGIVESKDTEQESLLLEHDIPYRPFGKAILDCLPPAGDKWIVPEKNSSA 562
Query: 276 ----RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 331
R+D R I +IDP D+DDAL RL++G VGVHIADVS+FVLP T +D+E
Sbjct: 563 LWNDREDFRELMICSIDPPGCQDIDDALHARRLANGNIEVGVHIADVSHFVLPDTPMDVE 622
Query: 332 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR-WIGRTV 390
A R T+VY++ ++I MLP LL + SL P V+RLAFS+ W+L ++ ++V
Sbjct: 623 AASRGTTVYLVDKRIDMLPSLLGTNLCSLKPEVERLAFSVIWELREEDSKIEAVRFTKSV 682
Query: 391 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 450
I+S +YE AQ D ++L + ++ SI+ L +++ LK
Sbjct: 683 IKSKAAFTYEAAQIRKD-------DSSLKD------------EISESIRLLNKLAIQLKK 723
Query: 451 KRFTDGALRLENS--KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
R +GAL L + K E P D + N L EEFMLLAN + A I +
Sbjct: 724 SRMDNGALNLASPEIKIHMSSSESSDPVDVEQKESRETNSLVEEFMLLANISVARRIYES 783
Query: 509 FPDSALLRRH---PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVL 565
FP +A+LRRH P N L+ + + GL+LD SSS SL++ + D
Sbjct: 784 FPQTAVLRRHNPPPKTNFEVLQ--DVLLKRRGLELDVSSSASLASSLDKC---IDPDVPA 838
Query: 566 FDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 624
F+ L+ ATR M A YF SG DT +GHY LA +YTHFTSP+RRY D++VHR L
Sbjct: 839 FNTLVRIMATRCMLPAEYFGSGSVSKDT-FGHYGLASEIYTHFTSPIRRYADVLVHRQLQ 897
Query: 625 AAL 627
AA+
Sbjct: 898 AAI 900
>gi|146418092|ref|XP_001485012.1| hypothetical protein PGUG_02741 [Meyerozyma guilliermondii ATCC
6260]
Length = 978
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 178/492 (36%), Positives = 252/492 (51%), Gaps = 43/492 (8%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
VVL+ + I+ R + + +V +D W S PQ H + G E +
Sbjct: 405 FVVLMDKVLPKIRIRTRKATDLLGKRIVVV-VDSWPSTSKHPQGHFVRSLGDVESAEAET 463
Query: 240 NAILYENAICCSGFSPESLSCLP--CVPWEVPQE------ELLSRKDLRNFCIFTIDPST 291
A+L E+ + FS L CLP W+VP+ +L RKDLR+ + +IDP
Sbjct: 464 EALLLEHDVEYRPFSKNVLDCLPKEGANWKVPETLNMADGQLAQRKDLRDKLVCSIDPPG 523
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
D+DDAL +L +G VGVHIADV++FV P TALD E R TSVY++ ++I MLP+
Sbjct: 524 CVDIDDALHARKLPNGNYEVGVHIADVTHFVKPNTALDQEGASRGTSVYLVDKRIDMLPM 583
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
LL + SL P VDR AFS+ W+L+ ++V+ +++I+S SYE AQ ID K
Sbjct: 584 LLGTNLCSLKPYVDRFAFSVIWELDQNAEIVNVDYMKSIIKSREAFSYEQAQLRIDDK-- 641
Query: 412 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFD 470
S N ++ +S++ L ++SK LK KR GAL L + + V +
Sbjct: 642 --SQN---------------DELTQSMRILLKLSKKLKQKRLDAGALNLASPEVKVHMDS 684
Query: 471 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRKLR 527
E P + + + N L EEFML AN + A I A+P +A+LRRH PA N L
Sbjct: 685 ETSDPGEVEIKKLLETNSLVEEFMLFANISVARKIYDAYPQTAMLRRHAPPPATNFEALN 744
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 586
E K G+ + SS SL++ E D Y F+ L+ +TR M A YF SG
Sbjct: 745 EM-LRVRKKGMSISLESSKALADSLDRC-EDPNDPY--FNTLLRIMSTRCMMAAEYFPSG 800
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR-----RMLP 641
+ ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR ++
Sbjct: 801 SY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHRDKTKMELIV 859
Query: 642 KNNHREGVRGRF 653
KN +R +F
Sbjct: 860 KNINRRHRNAQF 871
>gi|393782655|ref|ZP_10370838.1| ribonuclease R [Bacteroides salyersiae CL02T12C01]
gi|392672882|gb|EIY66348.1| ribonuclease R [Bacteroides salyersiae CL02T12C01]
Length = 713
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 224/430 (52%), Gaps = 45/430 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G+ G+ +++AIL E + P+++ +P E+
Sbjct: 194 KVIEWPDKAKNPIGQVIDILGKAGDNTTEMHAILAEFGLPY--VYPQAVEKAADKIPAEI 251
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI +L D + VGVHIADV+++V G+ +
Sbjct: 252 TAEEIARREDFRKVTTFTIDPKDAKDFDDALSIRKLKDNLWEVGVHIADVTHYVKEGSII 311
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ GDV + +
Sbjct: 312 DKEAEKRATSVYLVDRTIPMLPERLCNFLCSLRPHEEKLAFSVIFDITEKGDVKNSRVVH 371
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K D + L ++K L
Sbjct: 372 TVIYSDRRFTYEEAQQIIETK---------------------NGDFKDEVLMLDTIAKAL 410
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 411 REKRFAAGAINFDRYEVKFEIDEKGKPVSVYFKESKDANKLVEEFMLLANRTVAEQIGRV 470
Query: 509 --FPDSALL--RRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
+ +L R H P+ KL F ++ G +L TS S + L+ + K
Sbjct: 471 PKGKKAKVLPYRIHDLPDPEKLDNLNQFIARFGYKLRTSGTKTDISKSINHLLDDIQGKK 530
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++V
Sbjct: 531 EE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDMMV 578
Query: 620 HRTLNAALEA 629
HR + L+
Sbjct: 579 HRLVTKYLDG 588
>gi|327357528|gb|EGE86385.1| cell wall biogenesis protein phosphatase Ssd1 [Ajellomyces
dermatitidis ATCC 18188]
Length = 1407
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 182/660 (27%), Positives = 295/660 (44%), Gaps = 99/660 (15%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G VV++IER + G +G L +Q K + + A++ S DR+ +
Sbjct: 620 GHVVAVIERVAGQMFAGSLGLLRPSSQATKEKQEAERQAREGGHSRHHHDRQQEKPKIVW 679
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
PT + P + + + P + E A + A I W S P ++
Sbjct: 680 FKPTDKRVPLIAIPTEQAP----RDFVEKHADYANNIFVACIKRWPITSLHPFGTLVEQL 735
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFT 286
G G ++ + +A+L +N FS L + W V E L +R+D R+ FT
Sbjct: 736 GAMGNLKVETDALLRDNNFASDEFSEAVLKNVGFEKWSVKDEGEALLANRRDFRDETTFT 795
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP+ +LDDA+ ++ LSDG VG+H+ADV++F+ + +D EA+ R T VY++ R +
Sbjct: 796 IDPNGYKELDDAIHVKSLSDGKVEVGIHVADVAHFIKSNSLVDREAKKRGTGVYLMNRVV 855
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKLSYEHAQD 404
M+P L+ E+ SL PG +RL S+ + +NSA V + WIG+ VI+S KL+Y+
Sbjct: 856 NMIPPRLATEICSLLPGEERLTVSVVFQVNSATGSVEGEPWIGKGVIKSSGKLTYDEVDA 915
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
++ G FDVE L+G V IK+L++++ + R + + + +
Sbjct: 916 VLSGNFDVE-----------LHGA-----TVEDIKTLHDIAIKFRRARSGNRSSNIPALR 959
Query: 465 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 524
++ D+ P + + + L EE AN A+ + A PD A LRR PN R
Sbjct: 960 LLYQLDDENVPVEQNIFDTTPAHELIEELSHKANSFVAKKLLSALPDKAFLRRQAPPNFR 1019
Query: 525 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 584
+L+ F ++ G +D +SSG SL Q +D + + + MQ A Y+
Sbjct: 1020 RLKTFVDRMTRLGYDIDPTSSGTLQTSLFQI-----EDVDIRKGMETLLLKAMQRAKYYV 1074
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNN 644
+G+ +D HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1075 AGNVTEDQRQ-HYVLNLPVYTHFTNPSRRYADIIVHRQLEAVLS---------------- 1117
Query: 645 HREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCAD---ILVNVATHCNDRKLA 701
V C D IL A CN++K +
Sbjct: 1118 ------------------------------------NVECTDDVEILTKTAEQCNNKKDS 1141
Query: 702 CRNVKDACVKLYMWILLKKKEV-----LLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+ ++ V + ++ KK L+SE VL + + I + E+R++ D++
Sbjct: 1142 AQTAQEQSVHIESCRVMDKKRSEIGGDLISEGIVLCVYESAFDVLIPEYGFEKRVHCDQL 1201
>gi|260943097|ref|XP_002615847.1| hypothetical protein CLUG_04729 [Clavispora lusitaniae ATCC 42720]
gi|238851137|gb|EEQ40601.1| hypothetical protein CLUG_04729 [Clavispora lusitaniae ATCC 42720]
Length = 978
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 190/557 (34%), Positives = 274/557 (49%), Gaps = 69/557 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT R+VSI RS W Y G + SS+SV + +
Sbjct: 367 QPTARIVSITRRS--------------WRYYVG------QIAPSSVSVEEDN------GN 400
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
VVL+ L I+ + + + +V + +D W S +P H + G
Sbjct: 401 ASKTCFVVLMDKLLPKIRIKTRKAKDLLGQRIVVS-VDSWPSYSKYPLGHFVRSLGEIES 459
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQ------EELLSRKDLRNFCIFT 286
E + A+L E+ + FS L CLP W VP+ E+L R DLR+ + +
Sbjct: 460 AEAETEALLLEHDVEYRPFSKAVLECLPKEGDNWVVPENLDNGDEQLKKRVDLRHKLVCS 519
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP D+DDAL E L +G VGVHIADV++FV P T LD E R TSVY++ ++I
Sbjct: 520 IDPPNCVDIDDALHAEPLPNGNYEVGVHIADVTHFVKPNTPLDNEGASRGTSVYLVDKRI 579
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP+LL + SL P V+R +FS+ W+++ ++VD +++I+S SYE AQ I
Sbjct: 580 DMLPMLLGTNLCSLKPFVERFSFSVIWEVDEDANIVDVKYMKSIIKSRQAFSYEQAQLRI 639
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-P 465
D + ++ S++ L ++SK LK KR GAL L + +
Sbjct: 640 D-------------------DANQQDELTNSMRILLKLSKKLKQKRLDAGALNLASPEVK 680
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP---N 522
V + E P + + + N L EEFMLLAN + A I A+P +A+LRRH AP N
Sbjct: 681 VHMDSETSDPGEVEIKKLLETNSLVEEFMLLANISVARKIFDAYPQTAMLRRHAAPPATN 740
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
L E K+G+ + T SS SL++ E +D+Y F+ L+ +TR M A
Sbjct: 741 FEALNEM-LRVRKNGMSISTESSKALADSLDRC-EDPEDEY--FNTLVRIMSTRCMMAAE 796
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR---- 637
YF SG + D+ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 797 YFSSGSY-GYPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHRDKTK 855
Query: 638 -RMLPKNNHREGVRGRF 653
++ KN +R +F
Sbjct: 856 MELIVKNINRRHRNAQF 872
>gi|156048798|ref|XP_001590366.1| hypothetical protein SS1G_09131 [Sclerotinia sclerotiorum 1980]
gi|154693527|gb|EDN93265.1| hypothetical protein SS1G_09131 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1353
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 180/675 (26%), Positives = 308/675 (45%), Gaps = 94/675 (13%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G +V++IER + G +G L +Q K + + A+ S R+ +
Sbjct: 576 GHIVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERQARDGNSGRHQEQRQQDKPKIVW 635
Query: 170 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P D ++K + D + A I W S P ++
Sbjct: 636 FKPTDKRVPLIAIPTEQAPRDFVEKHQDYAD-----RIFVACIKRWPITSLHPFGTLVEQ 690
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIF 285
G+ GE++ + +A+L +N FS + W + +E+ + +R+D R F
Sbjct: 691 LGKMGELKVETDALLRDNNFASDEFSDAVTRSVGLDDWSLEKEDETSISTRRDFREEKTF 750
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
TIDP+ A +LDDA+ ++ +DG +G+HIADV++F+ + +D EA+ R T+VY++ R
Sbjct: 751 TIDPNGADELDDAIHVKTEADGKIEIGIHIADVAHFIKANSLVDREARKRGTAVYLMNRS 810
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWIGRTVIRSCCKLSYEHA 402
MLP ++ ++ SL PG DRL S+ + +N+ V + WIG+++I+S KL+Y+
Sbjct: 811 CAMLPPKIASDICSLTPGQDRLTVSVVFKVNAQTGTVFEEETWIGKSIIKSGGKLTYKDV 870
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
++ G+ DV + E ++ V+ I+ L V++ ++ R +
Sbjct: 871 DAVLSGQTDV---------------KLEGAE-VKDIQILNAVTQKFRESRLGSDGETIAP 914
Query: 463 SKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
+ V+ D+ P + + + L EE M AN A+ I + P+ ALLRR PN
Sbjct: 915 LRLVYQLDDENVPVEQNIFDSTPSHELIEELMNKANSYVAQKIYQGLPEKALLRRQGPPN 974
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
R+L+ F +K G ++DTSSSG+ SL + DD + + + M A Y
Sbjct: 975 SRRLQTFADRMNKIGYEIDTSSSGRLQNSLFKV-----DDTNIRKGMETLLVKSMHRAKY 1029
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPK 642
F +G + + HYAL P+YTHFT+P RRY DLVVHR L A L K
Sbjct: 1030 FVAGKTQPHL-YPHYALNLPLYTHFTNPSRRYADLVVHRQLEAVLSDGK----------- 1077
Query: 643 NNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLAC 702
I Y++D + LV CN +K +
Sbjct: 1078 --------------IEYNED----------------------IETLVKTTESCNTKKDSA 1101
Query: 703 RNVKDACVKLYMWILLKKKE-----VLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVE 757
+N ++ V + ++ +K L+SE V+ + + I + E+R++ D++
Sbjct: 1102 QNAQEQSVHIESCRIMDRKREEAGGELISEGIVVCVYESAFDVLIPEFGFEKRVHCDQLP 1161
Query: 758 GLIVEWLETTSTLVL 772
E+ + L L
Sbjct: 1162 LKKAEFRKNERVLEL 1176
>gi|383124676|ref|ZP_09945339.1| ribonuclease R [Bacteroides sp. 1_1_6]
gi|251841167|gb|EES69248.1| ribonuclease R [Bacteroides sp. 1_1_6]
Length = 718
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 220/430 (51%), Gaps = 45/430 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P V+ + G G+ +++AIL E + P+++ + +P E+
Sbjct: 197 KVTEWPDKAKNPIGQVIDILGVAGDNTTEMHAILAEFGLPY--VYPKAVETAADKIPAEI 254
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
EE+ R+D R FTIDP A D DDALSI + DG+ VGVHIADV+++V G +
Sbjct: 255 TPEEIARREDFRKVTTFTIDPKDAKDFDDALSIRPIKDGLWEVGVHIADVTHYVKEGGII 314
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V D I
Sbjct: 315 DKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAFSVIFDITEKGEVKDSRIVH 374
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI S + +YE AQ II+ K D + L ++K L
Sbjct: 375 TVINSDRRFTYEEAQQIIETK---------------------TGDFKEEVLMLDTIAKAL 413
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KRF GA+ + + F DE G P +D N L EEFMLLAN+T AE + R
Sbjct: 414 REKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEEFMLLANRTVAEKVGRV 473
Query: 509 FPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
+ R H P+ KL F ++ G ++ TS S + L+ K
Sbjct: 474 PKNKKAKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTDISKSINHLLDDIHGKK 533
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++V
Sbjct: 534 EE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDMMV 581
Query: 620 HRTLNAALEA 629
HR + ++
Sbjct: 582 HRLVTKYMDG 591
>gi|429725860|ref|ZP_19260675.1| ribonuclease R [Prevotella sp. oral taxon 473 str. F0040]
gi|429148658|gb|EKX91661.1| ribonuclease R [Prevotella sp. oral taxon 473 str. F0040]
Length = 802
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 158/431 (36%), Positives = 234/431 (54%), Gaps = 35/431 (8%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLS-CLPCVPWEV 268
+I +W E++ P+ V+ V G+ GE + +++AIL E + + PE++ + +
Sbjct: 191 KIVDWPEDTKSPRGEVVDVLGQEGENDTEMHAILAEYGLPYT--YPENVERAADKLHPGI 248
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
+EE+ R+D R FTIDP A D DDALSI RL+D VGVHIADVS++VL + +
Sbjct: 249 TEEEIAKREDFRQIPTFTIDPRDAKDFDDALSIRRLTDDTWEVGVHIADVSHYVLEDSVI 308
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA R+TSVY++ R IPMLP L + SL P ++LA+S+ +++N+ DV+ + +
Sbjct: 309 DQEALSRATSVYLVDRTIPMLPERLCNYICSLRPNEEKLAYSVIFEMNNNADVLHAQVAK 368
Query: 389 TVIRSCCKLSYEHAQDIID--GKFDVESSNTLGEGWPQLYG-----QFEWSDVVRSIKSL 441
TVI S + +YE AQ II+ G+ + GE P + G Q EW+ + L
Sbjct: 369 TVICSDRRFTYEEAQTIIERNGQASPDDLALPGE-HPAVDGSKENPQGEWA---MEVLQL 424
Query: 442 YEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTA 501
++K L+ KRF G++ + + F DE G P + + +D N L EEFMLLAN+T
Sbjct: 425 DHLAKQLRAKRFKGGSIGFDRPEVRFEIDEKGHPISTYVKIAKDANKLVEEFMLLANRTV 484
Query: 502 AEVIA----RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSL 552
AE +A P R H P+ K+ + F SK G ++ T S + L
Sbjct: 485 AEKVAIVPKGKQPKVLPYRIHDVPDAEKMEKLRGFVSKFGYKMRTEGSKTDVSKSLNNLL 544
Query: 553 EQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLR 612
+ + K K+++V+ + A R M A Y + GHY L F YTHFTSP+R
Sbjct: 545 AEVKGK-KEEHVVEMV----ALRAMMKARYSVH-------NIGHYGLMFRHYTHFTSPIR 592
Query: 613 RYPDLVVHRTL 623
RYPDL+VHR L
Sbjct: 593 RYPDLMVHRLL 603
>gi|291515528|emb|CBK64738.1| RNAse R [Alistipes shahii WAL 8301]
Length = 744
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 215/434 (49%), Gaps = 37/434 (8%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
E V RI +W S P ++ G G + ++++IL E + F PE +
Sbjct: 190 EKVVVRIADWLPGSKSPVGELVERLGMAGNNDTEMHSILAEYELPYR-FEPEIEEAAQAI 248
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
V +E+ R+D R FT+DP+ A D DDALS+ ++ DG+ VGVHIADV+++V P
Sbjct: 249 DARVTAKEIAQRRDFRGVTTFTVDPADAKDFDDALSVRKIKDGVWEVGVHIADVTHYVRP 308
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
+ +D EA R TSVY++ R +PMLP LS E+ SL P L FS + LN D+++
Sbjct: 309 HSVIDDEAVERGTSVYLVDRTVPMLPERLSNELCSLRPHETSLCFSAVFTLNENLDILEE 368
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 444
W GRTVI S + +Y AQ+II+ G G D + +L +
Sbjct: 369 WFGRTVIHSDRRFTYAEAQEIIE----------TGRG-----------DYAEEVLTLNRL 407
Query: 445 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 504
++ L+ +RF +GA+ + + F DE G P +++ N + EEFMLLAN+ AE
Sbjct: 408 AQALRKERFRNGAISFDREEVKFRLDENGKPLGVYFKEQKESNQMIEEFMLLANRRVAEF 467
Query: 505 IARAFPDSA-------LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 557
+ +S + R H P+ KL F F + G + + L + +
Sbjct: 468 CGKRRTESGRSAERTMVYRVHDTPSEEKLDRFRQFILRFGHIFKATKGRAVAKELNKLFK 527
Query: 558 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
++K + + A R M A Y + GHY LAFP YTHFTSP+RRYPD+
Sbjct: 528 QIKGT-TEENAVATMAVRSMAKAYYTTD-------NIGHYGLAFPYYTHFTSPIRRYPDM 579
Query: 618 VVHRTLNAALEAEK 631
+VHR L L K
Sbjct: 580 MVHRLLARYLAGGK 593
>gi|261200052|ref|XP_002626427.1| cell wall biogenesis protein phosphatase Ssd1 [Ajellomyces
dermatitidis SLH14081]
gi|239594635|gb|EEQ77216.1| cell wall biogenesis protein phosphatase Ssd1 [Ajellomyces
dermatitidis SLH14081]
Length = 1418
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 182/660 (27%), Positives = 295/660 (44%), Gaps = 99/660 (15%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G VV++IER + G +G L +Q K + + A++ S DR+ +
Sbjct: 631 GHVVAVIERVAGQMFAGSLGLLRPSSQATKEKQEAERQAREGGHSRHHHDRQQEKPKIVW 690
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
PT + P + + + P + E A + A I W S P ++
Sbjct: 691 FKPTDKRVPLIAIPTEQAP----RDFVEKHADYANNIFVACIKRWPITSLHPFGTLVEQL 746
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFT 286
G G ++ + +A+L +N FS L + W V E L +R+D R+ FT
Sbjct: 747 GAMGNLKVETDALLRDNNFASDEFSEAVLKNVGFEKWSVKDEGEALLANRRDFRDETTFT 806
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP+ +LDDA+ ++ LSDG VG+H+ADV++F+ + +D EA+ R T VY++ R +
Sbjct: 807 IDPNGYKELDDAIHVKSLSDGKVEVGIHVADVAHFIKSNSLVDREAKKRGTGVYLMNRVV 866
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKLSYEHAQD 404
M+P L+ E+ SL PG +RL S+ + +NSA V + WIG+ VI+S KL+Y+
Sbjct: 867 NMIPPRLATEICSLLPGEERLTVSVVFQVNSATGSVEGEPWIGKGVIKSSGKLTYDEVDA 926
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
++ G FDVE L+G V IK+L++++ + R + + + +
Sbjct: 927 VLSGNFDVE-----------LHGA-----TVEDIKTLHDIAIKFRRARSGNRSSNIPALR 970
Query: 465 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 524
++ D+ P + + + L EE AN A+ + A PD A LRR PN R
Sbjct: 971 LLYQLDDENVPVEQNIFDTTPAHELIEELSHKANSFVAKKLLSALPDKAFLRRQAPPNFR 1030
Query: 525 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 584
+L+ F ++ G +D +SSG SL Q +D + + + MQ A Y+
Sbjct: 1031 RLKTFVDRMTRLGYDIDPTSSGTLQTSLFQI-----EDVDIRKGMETLLLKAMQRAKYYV 1085
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNN 644
+G+ +D HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1086 AGNVTEDQRQ-HYVLNLPVYTHFTNPSRRYADIIVHRQLEAVLS---------------- 1128
Query: 645 HREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCAD---ILVNVATHCNDRKLA 701
V C D IL A CN++K +
Sbjct: 1129 ------------------------------------NVECTDDVEILTKTAEQCNNKKDS 1152
Query: 702 CRNVKDACVKLYMWILLKKKEV-----LLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+ ++ V + ++ KK L+SE VL + + I + E+R++ D++
Sbjct: 1153 AQTAQEQSVHIESCRVMDKKRSEIGGDLISEGIVLCVYESAFDVLIPEYGFEKRVHCDQL 1212
>gi|239608026|gb|EEQ85013.1| cell wall biogenesis protein phosphatase Ssd1 [Ajellomyces
dermatitidis ER-3]
Length = 1384
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 182/660 (27%), Positives = 295/660 (44%), Gaps = 99/660 (15%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G VV++IER + G +G L +Q K + + A++ S DR+ +
Sbjct: 597 GHVVAVIERVAGQMFAGSLGLLRPSSQATKEKQEAERQAREGGHSRHHHDRQQEKPKIVW 656
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
PT + P + + + P + E A + A I W S P ++
Sbjct: 657 FKPTDKRVPLIAIPTEQAP----RDFVEKHADYANNIFVACIKRWPITSLHPFGTLVEQL 712
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFT 286
G G ++ + +A+L +N FS L + W V E L +R+D R+ FT
Sbjct: 713 GAMGNLKVETDALLRDNNFASDEFSEAVLKNVGFEKWSVKDEGEALLANRRDFRDETTFT 772
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP+ +LDDA+ ++ LSDG VG+H+ADV++F+ + +D EA+ R T VY++ R +
Sbjct: 773 IDPNGYKELDDAIHVKSLSDGKVEVGIHVADVAHFIKSNSLVDREAKKRGTGVYLMNRVV 832
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKLSYEHAQD 404
M+P L+ E+ SL PG +RL S+ + +NSA V + WIG+ VI+S KL+Y+
Sbjct: 833 NMIPPRLATEICSLLPGEERLTVSVVFQVNSATGSVEGEPWIGKGVIKSSGKLTYDEVDA 892
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
++ G FDVE L+G V IK+L++++ + R + + + +
Sbjct: 893 VLSGNFDVE-----------LHGA-----TVEDIKTLHDIAIKFRRARSGNRSSNIPALR 936
Query: 465 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 524
++ D+ P + + + L EE AN A+ + A PD A LRR PN R
Sbjct: 937 LLYQLDDENVPVEQNIFDTTPAHELIEELSHKANSFVAKKLLSALPDKAFLRRQAPPNFR 996
Query: 525 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 584
+L+ F ++ G +D +SSG SL Q +D + + + MQ A Y+
Sbjct: 997 RLKTFVDRMTRLGYDIDPTSSGTLQTSLFQI-----EDVDIRKGMETLLLKAMQRAKYYV 1051
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNN 644
+G+ +D HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1052 AGNVTEDQRQ-HYVLNLPVYTHFTNPSRRYADIIVHRQLEAVLS---------------- 1094
Query: 645 HREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCAD---ILVNVATHCNDRKLA 701
V C D IL A CN++K +
Sbjct: 1095 ------------------------------------NVECTDDVEILTKTAEQCNNKKDS 1118
Query: 702 CRNVKDACVKLYMWILLKKKEV-----LLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+ ++ V + ++ KK L+SE VL + + I + E+R++ D++
Sbjct: 1119 AQTAQEQSVHIESCRVMDKKRSEIGGDLISEGIVLCVYESAFDVLIPEYGFEKRVHCDQL 1178
>gi|78186405|ref|YP_374448.1| 3'-5' exoribonuclease, VacB and RNase II [Chlorobium luteolum DSM
273]
gi|78166307|gb|ABB23405.1| RNAse R [Chlorobium luteolum DSM 273]
Length = 762
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 176/542 (32%), Positives = 262/542 (48%), Gaps = 84/542 (15%)
Query: 110 SYPTKRPTGRVVSIIERSPRRDGIVGFL-NVNQWFNYKGGSRKDAKKNRSSLSVPDREYI 168
S P +R G V II+R + IVG L N+ F K RK
Sbjct: 165 STPHQRCEGMVTKIIQR--KVSTIVGTLVRGNRRFTLKADERK----------------- 205
Query: 169 QLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
P++++ +K+ + ++G + EL ++++E Q VL +
Sbjct: 206 -------ILPEIIISIKNAA-----KAKDGQKVMVGEL------DFSKEGAI-QGKVLEI 246
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTID 288
G G+ +++AI I + F E + + V ++L R D+R+ +FTID
Sbjct: 247 LGTAGDSAVEVSAIARSKGIDET-FDKEIVKAASAMKMGVTDKDLQERLDVRDKVLFTID 305
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P A D DDALS+E L +G+ ++GVHIADVS++V + LD EA R+TSVY++ R IPM
Sbjct: 306 PVDAKDFDDALSVEPLENGLWKIGVHIADVSHYVTEDSPLDKEALKRATSVYLVDRVIPM 365
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG 408
LP LSE++ SLNPGVDR+AFS+F+ + G V +TVI S + +YE Q+I++
Sbjct: 366 LPSRLSEDICSLNPGVDRMAFSVFFTMTEDGKVQKHEFHKTVIHSKRRFTYEDVQEILNN 425
Query: 409 KFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFL 468
K D + ++ L ++S +L+++RF G L E + F
Sbjct: 426 K---------------------KGDYLMELQLLEKISVLLREERFRHGGLDFETEEVRFK 464
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF------PDSALLRRHPAPN 522
+ G P + + R + L EEFMLLAN+ AE + + F P + R H +P
Sbjct: 465 LGKKGEPLEVMKKERLGSHRLIEEFMLLANRKVAEFLTKTFKEGKKVPQPVIYRVHDSPQ 524
Query: 523 MRKLREFEAFCSKHG--LQLDTSSSGQF--HQSLEQAREKLKDDYVLFDILIN-YATRPM 577
++ F K G L+++ G +SL + +K+ V F L+N R M
Sbjct: 525 QERVIILANFVKKIGYDLKINKGKDGPIVSAKSLRELLQKVHGTNVEF--LVNELVLRCM 582
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
A Y D GHY L F YTHFTSP+RRYPDL+VHR L E E K R
Sbjct: 583 SKAVYTGEND-------GHYGLGFEHYTHFTSPIRRYPDLIVHRLL---FEYEAFRKKRR 632
Query: 638 RM 639
+M
Sbjct: 633 KM 634
>gi|354548336|emb|CCE45072.1| hypothetical protein CPAR2_700760 [Candida parapsilosis]
Length = 985
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 243/470 (51%), Gaps = 37/470 (7%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
++++ K LP I+ R + + +V +D W +S +P H + G E +
Sbjct: 414 VILMDKTLP-KIRIRTRKAKEYLGQRIVVV-VDSWPSDSKYPNGHFVRALGEVESAEAET 471
Query: 240 NAILYENAICCSGFSPESLSCLPCV--PWEVPQ------EELLSRKDLRNFCIFTIDPST 291
A+L E+ + FS L CLP W VP +L R DLR+ + +IDP
Sbjct: 472 EALLLEHDVEYRPFSKNVLDCLPKEGDNWVVPDIANTDDTQLQKRVDLRDKLVCSIDPPN 531
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
D+DDAL ++L +G VGVHIADV++FV GTALD E R TSVY++ ++I MLP+
Sbjct: 532 CVDIDDALHAQKLPNGNYEVGVHIADVTHFVKAGTALDQEGASRGTSVYLVDKRIDMLPM 591
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
LL + SL P VDR AFS+ W+++ ++V+ +++I+S SYE AQ ID
Sbjct: 592 LLGTNLCSLKPFVDRFAFSVIWEVDEDANIVNVKFMKSIIKSRQAFSYEQAQLRIDD--- 648
Query: 412 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFD 470
P + D+ S++ L ++SK LK KR GAL L + + V +
Sbjct: 649 -----------PN-----QNDDLTNSMRILLKLSKKLKQKRLDAGALNLASPEVKVHMDS 692
Query: 471 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFE 530
E P + + + N L EEFML AN + A I A+P +A+LRRH AP
Sbjct: 693 ETSDPQEVEIKKLLETNSLVEEFMLFANISVARKIYDAYPQTAMLRRHAAPPATNFETLN 752
Query: 531 AFCS--KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGD 587
+ K+GL + T SS SL++ + D Y F+ LI +TR M A YF SG
Sbjct: 753 DMLNVRKNGLSISTESSKALADSLDRCVDH-NDPY--FNTLIRIMSTRCMMAAEYFPSGS 809
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
+ ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 810 Y-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHR 858
>gi|392397436|ref|YP_006434037.1| RNAse R [Flexibacter litoralis DSM 6794]
gi|390528514|gb|AFM04244.1| RNAse R [Flexibacter litoralis DSM 6794]
Length = 797
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 150/427 (35%), Positives = 222/427 (51%), Gaps = 36/427 (8%)
Query: 207 VAARIDEWNEES-PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP 265
V ++ +W+EE P V V G+ GE E +I+AI+ E + F + + VP
Sbjct: 255 VIVKVLKWSEEKGKNPLGEVTEVLGKVGENEAEIHAIMVEFGLPMD-FDEKLIKKAEEVP 313
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
++ +E R+D R FTIDP A D DDA+S+ L +G +GVHIADV++++ P
Sbjct: 314 DDLTDKEFKKRRDFRPILTFTIDPHDAKDFDDAISLSYLPNGNYEIGVHIADVTHYIRPN 373
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
T L+ EAQ R+TSVY++ R +PMLP +S + SL P ++LAFS ++L+ G V +RW
Sbjct: 374 TLLEKEAQKRATSVYLVDRVVPMLPERISNNLCSLRPQEEKLAFSAVFELDKNGSVHNRW 433
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 445
G+TVI S + +YE AQ+ I+ K EG D I L +++
Sbjct: 434 YGKTVIYSDRRFTYEEAQERIETK----------EG-----------DYADEINLLNDIA 472
Query: 446 KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI 505
K L+ KRF GA+ E + F DE G P + R+D + L EE+MLLANK+ AE +
Sbjct: 473 KKLQAKRFKHGAISFETQEVKFQLDENGKPLGVIQKIRKDAHKLVEEYMLLANKSVAEFV 532
Query: 506 AR----AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
R ++ + R H P+ KL +A G ++ F SL + E +
Sbjct: 533 YRYKNGKEKNTMIYRVHDDPDPDKLANLKAMAKSFGYDINIEPEF-FAASLAKLVEDT-E 590
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
++ L + A R M A Y GH+ LAF Y+HFTSP+RRYPD++ HR
Sbjct: 591 GKPEYETLQSLAIRSMSKAVYTTKA-------TGHFGLAFDHYSHFTSPIRRYPDMMAHR 643
Query: 622 TLNAALE 628
+ L+
Sbjct: 644 LIEKYLK 650
>gi|406864888|gb|EKD17931.1| RNB domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1392
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 180/660 (27%), Positives = 304/660 (46%), Gaps = 95/660 (14%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G +V+++ER + G +G L +Q K + + A+ S R+ +
Sbjct: 609 GHIVAVVERVAGQMFSGTLGLLRPSSQATKEKQEAERQARDGNSGRHQEQRQQDKPKIVW 668
Query: 170 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P D ++K + D + A I W S P ++
Sbjct: 669 FKPTDKRVPLIAIPTEQAPRDFVEKHQDYAD-----RIFVACIKRWPITSLHPFGTLVEQ 723
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE---ELLSRKDLRNFCIF 285
G+ GE++ + +A+L +N FS + W + +E E+ +R+D RN F
Sbjct: 724 LGKMGELKVETDALLRDNNFASDEFSDAVTRSVGLDEWSIEKEDEAEIAARRDFRNEKTF 783
Query: 286 TIDPSTATDLDDALSIE-RLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
TIDP+ A +LDDA+ ++ DG +G+HIADV++F+ + +D EA+ R ++VY++ R
Sbjct: 784 TIDPNGADELDDAIHVKTEEEDGKIEIGIHIADVAHFIKANSLVDREARKRGSAVYLMNR 843
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWIGRTVIRSCCKLSYEH 401
MLP ++ E+ SL PG DRL S+ + +N+ +V D WIG+++I+S KL+Y+
Sbjct: 844 SCAMLPPKIASEICSLVPGQDRLTVSVVFKVNAHTGMVSDEDTWIGKSIIKSAGKLTYKE 903
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
++ G D + + +D VR I+ L VS+ +++R +
Sbjct: 904 VDAVLSGHLDT---------------KLDGAD-VREIQILNAVSQKWRERRLGTEGETIT 947
Query: 462 NSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
+ ++ D+ P + + + L EE M AN A+ I + P+ ALLRR P
Sbjct: 948 PLRLIYQLDDENVPVEQNIFDSTPSHELIEELMHKANAYVAQRIFKGLPEKALLRRQGPP 1007
Query: 522 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 581
N R+L+ F + +K G ++D ++SG SL + DD + + + M A
Sbjct: 1008 NPRRLQTFISRMNKIGYEIDATTSGTLQTSLFKV-----DDTQIRLGMETLLVKAMHRAK 1062
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLP 641
YF +G + HYAL FP+YTHFT+P RRY DLVVHR L A L K+ +
Sbjct: 1063 YFIAGKTPAHL-YPHYALNFPLYTHFTNPSRRYADLVVHRQLEAVLSEGKIEFN------ 1115
Query: 642 KNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLA 701
E +E LV CN +K +
Sbjct: 1116 -----------------------EDIE------------------TLVKTTESCNTKKDS 1134
Query: 702 CRNVKDACVKLYM-WILLKKKEV----LLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
+N ++ V + I+ +K+E L+SE VLA+ + I + E+R++ D++
Sbjct: 1135 SKNAQEQSVHIESCRIMDRKREAAGGELISEGIVLAVYDSAFDVLIPEYGFEKRVHCDQL 1194
>gi|189459727|ref|ZP_03008512.1| hypothetical protein BACCOP_00355 [Bacteroides coprocola DSM 17136]
gi|189433574|gb|EDV02559.1| ribonuclease R [Bacteroides coprocola DSM 17136]
Length = 716
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 224/435 (51%), Gaps = 59/435 (13%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
+I EW EE+ P V+ + G+ GE +++AIL E + P+++ + + E+
Sbjct: 195 KITEWPEEAKNPFGEVIDILGKAGENTTEMHAILAEYGLPY--VYPQAVEAAAEKISAEI 252
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
E+ R+D R+ FTIDP A D DDALSI +L G+ VGVHIADVS++V G+ +
Sbjct: 253 TPEDYAEREDFRDIVTFTIDPKDAKDFDDALSIRQLKPGLWEVGVHIADVSHYVKEGSII 312
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA R+TSVY++ R IPMLP L + SL P ++LA+S+ +++N ++ D I
Sbjct: 313 DKEAVKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFNMNEKAEIKDYRIRH 372
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI+S + +YE AQ+II+ GEG D I L ++++IL
Sbjct: 373 TVIKSNRRFTYEEAQNIIE----------TGEG-----------DYKEEILQLNKLAQIL 411
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA-- 506
++KR GA+ + + F DE G P ++ N L EEFMLLAN+T AE I
Sbjct: 412 REKRMAAGAINFDRCEVKFEIDEKGKPLSVYFKVSKEANKLIEEFMLLANRTVAEHIGKV 471
Query: 507 ------RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS--------GQFHQSL 552
+ FP R H P+ KL F ++ G ++ T S + +
Sbjct: 472 PKNKKPKVFP----YRIHDLPDPDKLDNLSQFIARFGYKIRTGGSKTDVSKSINRLLSDI 527
Query: 553 EQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLR 612
E +E+ +++ + R MQ A Y + GHY LAF YTHFTSP+R
Sbjct: 528 EGKKEQ--------NLIETVSLRAMQKARYSI-------YNIGHYGLAFDFYTHFTSPIR 572
Query: 613 RYPDLVVHRTLNAAL 627
RYPDL+VHR L L
Sbjct: 573 RYPDLMVHRLLTRYL 587
>gi|295667800|ref|XP_002794449.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285865|gb|EEH41431.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1343
Score = 239 bits (609), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 185/662 (27%), Positives = 296/662 (44%), Gaps = 103/662 (15%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G VV++IER + G +G L +Q K + + A+ S DR+ +
Sbjct: 557 GHVVAVIERVAGQMFSGSLGVLRPSSQATKEKQEAERQARDGSHSRHHHDRQQEKPKIVW 616
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
PT + P + + + P + E A + A I W S P ++
Sbjct: 617 FKPTDKRVPLIAIPTEQAP----RDFVEKHADYANNIFVACIKRWPITSLHPFGTLVEQL 672
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFT 286
G G ++ + +A+L +N FS L + W V E L SR+D R FT
Sbjct: 673 GAMGNLKVETDALLRDNNFASDEFSDAVLKNVGFENWSVEDEGEALLSSRRDFRYETTFT 732
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP+ +LDDA+ ++ LSDG +G+H+ADV++F+ + +D EA+ R T VY++ R +
Sbjct: 733 IDPNGTKELDDAIHVKTLSDGKVEIGIHVADVAHFIKGNSLVDREAKKRGTGVYLMNRVV 792
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKLSYEHAQD 404
MLP LS E+ SL PG +RL S+ + +N A +V + WIG+ VI+S KL+Y+
Sbjct: 793 NMLPPRLSTEICSLLPGEERLTVSVVFQVNPATGIVEGEPWIGKAVIKSSGKLTYDEVDA 852
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
++ G D+ QL+G V IK+L +++ K+ RF + + R+ + +
Sbjct: 853 VLGGNSDI-----------QLHGV-----TVDDIKTLNDIASKFKEARFGNRSTRIPSLR 896
Query: 465 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 524
++ D+ P + + + L EE AN AE + A P+ ALLRR PN R
Sbjct: 897 LLYQLDDENVPVEHNIFDTTPAHELIEELSHKANTFVAEKLVSALPEKALLRRQAPPNFR 956
Query: 525 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYAT-----RPMQL 579
+L+ F ++ G +D++SSG SL + + D+ I + MQ
Sbjct: 957 RLQTFVDRMTRLGYDIDSTSSGTLQTSL----------FKIGDVEIRKGMETLLLKAMQR 1006
Query: 580 ASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRM 639
A Y+ +G D+ HY L P+YTHFTSP R D+VVHR L A L
Sbjct: 1007 AKYYVAGSVTDEQRQ-HYVLKLPLYTHFTSPSGRDADIVVHRQLEAVLS----------- 1054
Query: 640 LPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRK 699
G F E +E L A CN++K
Sbjct: 1055 ----------NGEF----------TEDIEN------------------LTKTAEQCNNKK 1076
Query: 700 LACRNVKDACVKLYMWILLKKKEV-----LLSEARVLALGPRFMTIYIEKLAIERRIYYD 754
+ +N ++ V + ++ KK L+SE VL + + I + E+R++ D
Sbjct: 1077 DSAQNAQEQSVHIESCRIMDKKRQEIGGDLISEGIVLCVYESAFDVLIPEYGFEKRVHCD 1136
Query: 755 EV 756
++
Sbjct: 1137 QL 1138
>gi|406025405|ref|YP_006705706.1| ribonuclease R [Cardinium endosymbiont cEper1 of Encarsia
pergandiella]
gi|404433004|emb|CCM10286.1| Ribonuclease R [Cardinium endosymbiont cEper1 of Encarsia
pergandiella]
Length = 697
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 224/430 (52%), Gaps = 47/430 (10%)
Query: 218 SPFPQAH------VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE 271
+ FP H V+ G+ G E +++AI+ E + GF + + +P + ++
Sbjct: 180 TSFPNTHKQLTGTVVEHLGQAGLHEVEMHAIMAEFGLK-EGFPDHVVESIKNIPTVITEK 238
Query: 272 ELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIE 331
E+ R+D+R+ FTIDP A D DDALS + L++G +VG+HIADVS++V+P + LD E
Sbjct: 239 EITKRRDMRHIPTFTIDPVDAKDFDDALSYQPLANGHHQVGIHIADVSHYVIPDSLLDKE 298
Query: 332 AQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVI 391
A R+TSVY++ R IPMLP +LS + SL P +L FS ++L++ G V D+W+G T+I
Sbjct: 299 AYARNTSVYLVDRCIPMLPEILSNGLCSLRPNETKLTFSAIFELDAQGKVYDKWLGETII 358
Query: 392 RSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDK 451
S + SYE AQ ID F+ D +++ L ++K + K
Sbjct: 359 YSDKRFSYEEAQMAID---------------------FQRGDFYQALTVLNHLAKQIHAK 397
Query: 452 RFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA----- 506
R GA+ E VF D G P R D + L EEFMLLAN+ A A
Sbjct: 398 RSQKGAINFETRSLVFDLDTNGKPLKVTSKCRTDAHKLIEEFMLLANQEVATYAAYLKQK 457
Query: 507 -RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFH--QSLEQAREKLKDDY 563
+ + R H P+ KL +F F ++ G +++ + + + LE+A + K+
Sbjct: 458 QENLRPTFIYRTHGYPDPDKLNDFFLFVNQLGYKINRAKTSIYKAMHDLEKAIQGKKEA- 516
Query: 564 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
I+ + A R M A Y D H+ALAF YTHFTSP+RRYPD++VHR L
Sbjct: 517 ---PIIQSLAIRSMAKALYTTKPD-------PHFALAFAHYTHFTSPIRRYPDVLVHRLL 566
Query: 624 NAALEAEKLY 633
L+ E +Y
Sbjct: 567 KQYLKGEHIY 576
>gi|409122693|ref|ZP_11222088.1| ribonuclease R [Gillisia sp. CBA3202]
Length = 731
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 143/427 (33%), Positives = 222/427 (51%), Gaps = 18/427 (4%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V ++EW E++ P + V G+ GE +++AIL + + F E +
Sbjct: 189 VVVTMEEWPEKADSPFGSIKQVLGKPGEHHTEMHAILAQYGLPHE-FPKEIEDFANNIDT 247
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+ + E+ R+DLR FTIDP A D DDALS ++L +G +G+HIADVS+++ PGT
Sbjct: 248 SIQENEIKKRRDLRETLTFTIDPKDAKDFDDALSFKKLENGNFEIGIHIADVSHYLQPGT 307
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R +PMLP +LS SL P ++ FS +++++ G V + W
Sbjct: 308 ILDDEAYERATSVYLVDRVVPMLPEVLSNNACSLRPNEEKYTFSAVFEIDAKGYVKNEWF 367
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
GRTV S + +YE AQ II + E E + G +VV ++ +L +++K
Sbjct: 368 GRTVTLSDERFAYEEAQHII----ETEKGIIPTEISIRENGYNVGDNVVDAVVTLNDLAK 423
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
++ +R DGA+ + + F +E P ++ N L EEFMLLANK A+ I
Sbjct: 424 QMRVRRMADGAISFDKVEVKFNLNEENEPVGVFFKTSQEANKLIEEFMLLANKRVAQFIG 483
Query: 507 RAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK--DDY 563
+ P + R H P+ KL + SK G +++ SL + ++ +
Sbjct: 484 KQTPKKTFVYRCHDEPDDSKLNTLQTVISKFGYKINLKDKKSISNSLNELLSDVQGTKEQ 543
Query: 564 VLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
L D L R M A Y + GHY L+F Y+HFTSP+RRYPD++ HR L
Sbjct: 544 NLVDTL---TIRTMSKAYYSTK-------NIGHYGLSFDYYSHFTSPIRRYPDVMTHRLL 593
Query: 624 NAALEAE 630
+ L+++
Sbjct: 594 QSYLDSK 600
>gi|393785787|ref|ZP_10373933.1| ribonuclease R [Bacteroides nordii CL02T12C05]
gi|392661406|gb|EIY54992.1| ribonuclease R [Bacteroides nordii CL02T12C05]
Length = 713
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 149/430 (34%), Positives = 226/430 (52%), Gaps = 45/430 (10%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
++ EW +++ P VL + G+ G+ +++AIL E + P+++ +P E+
Sbjct: 194 KVIEWPDKAKNPIGQVLDILGKAGDNTTEMHAILAEFGLPY--VYPQAVEKAADKIPAEI 251
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
+EE+ R+D R FTIDP A D DDALSI +L D + VGVHIADV+++V G +
Sbjct: 252 SEEEIAKREDFRKVTTFTIDPKDAKDFDDALSIRKLKDNLWEVGVHIADVTHYVKEGGII 311
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA+ R+TSVY++ R IPMLP L + SL P ++LAFS+ +D+ G+V + I
Sbjct: 312 DKEAEKRATSVYLVDRTIPMLPERLCNFLCSLRPHEEKLAFSVIFDITEKGEVKNSRIVH 371
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
T+I S + +YE AQ II+ + EG D + + ++K L
Sbjct: 372 TIIYSDRRFTYEEAQQIIETQ----------EG-----------DFKEEVLMMDTIAKAL 410
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
+++RF GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 411 RERRFAAGAINFDRYEVKFEIDEKGKPVSVYFKESKDANKLVEEFMLLANRTVAEKIGRV 470
Query: 509 --FPDSALL--RRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKL 559
+ +L R H P+ KL F ++ G +L TS S + L+ + K
Sbjct: 471 PKGKKAKVLPYRIHDLPDPEKLDNLSQFIARFGYKLRTSGTKTDISKSINHLLDDIQGKK 530
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RR+PD++V
Sbjct: 531 EE-----NLIETVSIRAMQKARYSTH-------NIGHYGLAFDYYTHFTSPIRRFPDMMV 578
Query: 620 HRTLNAALEA 629
HR + L+
Sbjct: 579 HRLVTKYLDG 588
>gi|440639435|gb|ELR09354.1| hypothetical protein GMDG_03920 [Geomyces destructans 20631-21]
Length = 1399
Score = 238 bits (608), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 187/675 (27%), Positives = 309/675 (45%), Gaps = 94/675 (13%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G +V++IER + G +G L +Q K + + A+ S R+ +
Sbjct: 614 GHIVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERQARDGNSGRHHEQRQQDKPKIVW 673
Query: 170 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P D ++K + D + A I W S P ++ +
Sbjct: 674 FKPTDKRVPLIAIPTEQAPRDFVEKHQDYAD-----RIFVACIKRWPITSLHPFGTLVEM 728
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIF 285
G+ GE++ + +A+L +N FS + + W + +E+ + SR+D R+ F
Sbjct: 729 LGKMGELKVETDALLRDNNFASDEFSDAVIRSINLDEWSLAKEDEATIASRRDFRDEKAF 788
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
TIDP+ +LDDA+ I+ DG +G+HIADV++F+ + +D EA+ R T+VY++ R
Sbjct: 789 TIDPNGVNELDDAIHIKGEVDGKIEIGIHIADVAHFIKANSLVDREAKKRGTAVYLMNRS 848
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWIGRTVIRSCCKLSYEHA 402
MLP ++ +V SL PG DRL S+ + +N+ V D WIG+++I+S KLSY
Sbjct: 849 CNMLPPKIASDVCSLIPGEDRLTVSVVFKVNTLTGAVADDDIWIGKSIIKSSGKLSYREV 908
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
++ G+ +V +L G SD + I+ L VS+ ++ R +
Sbjct: 909 DAVLSGQGNV-----------KLDG---ISD--KDIQILQAVSRKFREARLGSEGETIAP 952
Query: 463 SKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
+ ++ D+ P ++ + + L EE M AN A+ IA+ P+ ALLRR APN
Sbjct: 953 LRLMYQLDDENVPVEANIFNSTPSHELIEELMHKANTYVAQKIAQGLPEKALLRRQGAPN 1012
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
R+LR F + G ++DT+SSG SL + DD + + + + A Y
Sbjct: 1013 PRRLRTFADRMTALGYEIDTTSSGTLQNSLFKV-----DDSEIRKGMETLLVKAIPRAKY 1067
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPK 642
F +G + HY L P+YTHFT+P RRY D+VVHR L + L K
Sbjct: 1068 FIAGRTLEHL-HPHYYLNLPLYTHFTNPSRRYADIVVHRQLESVLSEGK----------- 1115
Query: 643 NNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLAC 702
I Y++D D LV CN +K +
Sbjct: 1116 --------------IEYNED----------------------IDALVKATESCNTKKDSA 1139
Query: 703 RNVKDACVKLYMWILLKKK-----EVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVE 757
+N ++ V + ++ KK E L+SE VLA+ + I + E+R++ D++
Sbjct: 1140 QNAQEQSVHIESCRIMDKKREDLGEDLISEGIVLAVYESAFDVLIPEYGFEKRVHCDQLP 1199
Query: 758 GLIVEWLETTSTLVL 772
E+ + L L
Sbjct: 1200 LKKAEFRKNERVLEL 1214
>gi|157150067|ref|YP_001450020.1| ribonuclease R [Streptococcus gordonii str. Challis substr. CH1]
gi|157074861|gb|ABV09544.1| ribonuclease R [Streptococcus gordonii str. Challis substr. CH1]
Length = 782
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 160/451 (35%), Positives = 244/451 (54%), Gaps = 30/451 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSVFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLKGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G D E + GQF+ +V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--DEEKA-----------GQFKA--IVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++ KIL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHKILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S Q+L++ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQEIMEAVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TLNAALEAEKLYWKHRRMLPKNNHREGVRGR 652
+ +++++ +++P+ + R R
Sbjct: 573 MVRDYGQSKEIAEHFEQVIPEIASQSSSRER 603
>gi|448535104|ref|XP_003870907.1| hypothetical protein CORT_0G00920 [Candida orthopsilosis Co 90-125]
gi|380355263|emb|CCG24780.1| hypothetical protein CORT_0G00920 [Candida orthopsilosis]
Length = 984
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 168/470 (35%), Positives = 244/470 (51%), Gaps = 37/470 (7%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
++++ K LP I+ R ++ + +V +D W +S +P H + G E +
Sbjct: 413 VILMDKTLP-KIRIRTKKAKEYLGQRIVVV-VDSWPSDSKYPNGHFVRALGEVESAEAET 470
Query: 240 NAILYENAICCSGFSPESLSCLPCV--PWEVPQ------EELLSRKDLRNFCIFTIDPST 291
A+L E+ + FS L CLP W VP +L R DLR+ + +IDP
Sbjct: 471 EALLLEHDVEYRPFSKNVLDCLPKEGDNWVVPDITNTDDLQLQKRVDLRDKLVCSIDPPN 530
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
D+DDAL ++L +G VGVHIADV++FV GTALD E R TSVY++ ++I MLP+
Sbjct: 531 CVDIDDALHAQKLPNGNYEVGVHIADVTHFVKAGTALDQEGASRGTSVYLVDKRIDMLPM 590
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
LL + SL P VDR AFS+ W+++ ++V+ +++I+S SYE AQ ID
Sbjct: 591 LLGTNLCSLKPFVDRFAFSVIWEVDEDANIVNVKFMKSIIKSRQAFSYEQAQLRIDD--- 647
Query: 412 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFD 470
P + ++ S++ L ++SK LK KR GAL L + + V +
Sbjct: 648 -----------PN-----QQDELTNSMRILLKLSKKLKQKRLDAGALNLASPEVKVHMDS 691
Query: 471 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFE 530
E P + + + N L EEFML AN + A I A+P +A+LRRH AP
Sbjct: 692 ETSDPQEVEIKKLLETNSLVEEFMLFANISVARKIYDAYPQTAMLRRHAAPPATNFETLN 751
Query: 531 AFCS--KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGD 587
+ K+GL + T SS SL++ + D Y F+ LI +TR M A YF SG
Sbjct: 752 DMLNVRKNGLSISTESSKALADSLDRCVDP-NDSY--FNTLIRIMSTRCMMAAEYFPSGS 808
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
+ ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 809 Y-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHR 857
>gi|345567046|gb|EGX49984.1| hypothetical protein AOL_s00076g625 [Arthrobotrys oligospora ATCC
24927]
Length = 975
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 250/528 (47%), Gaps = 64/528 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
+PT ++V +++R+ R VG ++ N K G + + + P
Sbjct: 379 QPTAKIVGVLKRNWR--SYVGHIDPNSVNRAKSGGQ---------------QVVFFRPLD 421
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
K P++ V + + +R + ID W+ S FP H + G
Sbjct: 422 KKIPRIRVFTRQATQLLGQR------------IVVNIDTWDRTSRFPVGHFVRALGELES 469
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQEELL---SRKDLRNFCIFTIDP 289
E + A+L E + F L CLP W VP++ R DLR+ + +IDP
Sbjct: 470 KEAETEALLLEYDVQYRPFPKAVLDCLPSEGHDWIVPEKGTSGWEKRVDLRDLLVCSIDP 529
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
D+DDAL L +G GVHIADVS+FV P A+D EA R T+VY++ ++I ML
Sbjct: 530 PGCQDIDDALHARLLPNGNYEAGVHIADVSHFVKPNNAMDDEAASRGTTVYLVDKRIDML 589
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P LL ++ SL P V+R AFS+ W++ +V+ ++VI+S +Y+ AQ ID K
Sbjct: 590 PPLLGTDLCSLKPYVERYAFSVIWEMTPDAKIVNTKFTKSVIKSREAFAYKAAQMRIDDK 649
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFL 468
++ L EG ++ L +SK LK R GAL L + + + +
Sbjct: 650 ---SQTDPLTEG----------------MRILLMLSKKLKQARMDAGALNLASPEVKIHM 690
Query: 469 FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRK 525
E P + + N L EEFML AN + A I AFP +A+LRRH PA N
Sbjct: 691 ESETSDPASIEVKELLETNSLVEEFMLCANISVARKIYEAFPQTAMLRRHGAPPATNFDD 750
Query: 526 LREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFC 584
LR ++ GL L SS SL+ + F+ L+ ATR M A YF
Sbjct: 751 LR--SQLRARKGLDLRVESSKALADSLDGC---VDPQEAYFNTLVRIIATRCMLPAEYFS 805
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
SG + ++ HY LA +YTHFTSP+RRY DL HR L AA+E E L
Sbjct: 806 SGT-QAYPEFRHYGLATDIYTHFTSPIRRYADLAAHRQLAAAIEYEAL 852
>gi|319900672|ref|YP_004160400.1| RNAse R [Bacteroides helcogenes P 36-108]
gi|319415703|gb|ADV42814.1| RNAse R [Bacteroides helcogenes P 36-108]
Length = 717
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 226/430 (52%), Gaps = 45/430 (10%)
Query: 209 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWE 267
++ EW +++ P V+ + GR G+ +++AIL E + P ++ + + E
Sbjct: 196 VKVVEWPDKAKNPIGQVIDILGRTGDNTTEMHAILAEFGLPY--VYPSAVENAADKISDE 253
Query: 268 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 327
+P EE+ R+D R+ FTIDP A D DDALSI +L +G+ VGVHIADV+++V G
Sbjct: 254 IPAEEIAKREDFRSVTTFTIDPKDAKDFDDALSIRKLKEGLWEVGVHIADVTHYVKEGGI 313
Query: 328 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 387
+D EA+ R+TSVY++ R IPMLP L + SL P ++LA+S+ +++ G+V + +
Sbjct: 314 IDKEAEKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFEMTEKGEVNNSRVV 373
Query: 388 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 447
TVI+S + +YE AQ+II+ + D + L ++K+
Sbjct: 374 HTVIKSNRRFTYEEAQNIIETR---------------------KGDFKEEVLQLDRLAKL 412
Query: 448 LKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR 507
L++ RF GA+ + + F DE G P +D N L EEFMLLAN+T AE I R
Sbjct: 413 LRESRFKAGAINFDRYEVKFEIDEKGKPVSVYFKESKDANKLVEEFMLLANRTVAEKIGR 472
Query: 508 A--FPDSALL--RRHPAPNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREK 558
+ +L R H P+ KL F ++ G +L T S + L+ + K
Sbjct: 473 VPKGKKAKVLPYRIHDLPDPEKLDNLAQFIARFGYKLRTGGTKTDVSKSINHLLDDIQGK 532
Query: 559 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
++ +++ + R MQ A Y + GHY LAF YTHFTSP+RRYPD++
Sbjct: 533 KEE-----NLIETVSIRAMQKARYSVH-------NVGHYGLAFDYYTHFTSPIRRYPDMM 580
Query: 619 VHRTLNAALE 628
VHR L L+
Sbjct: 581 VHRLLTKYLD 590
>gi|256084634|ref|XP_002578532.1| ribonuclease II-related [Schistosoma mansoni]
Length = 991
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 197/665 (29%), Positives = 303/665 (45%), Gaps = 84/665 (12%)
Query: 91 SSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSR 150
S+Q+N + LS M S P + I RS +VG ++ N W +Y
Sbjct: 204 SAQENCAAEFVNDLSNMSGSKPNEDCFKS--ETISRSLPCGFVVGVISHN-WRDYVCTYV 260
Query: 151 KDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAAR 210
+ +N S S + +I +TP + P + + + ++R R
Sbjct: 261 PKSTEN-SLDSKSESGWIIVTPWDRRIPLIRLHTTQISKLTRERF------------IVR 307
Query: 211 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV----PW 266
ID W+ S +P H + G G++E + IL E+ + F+ LS L + PW
Sbjct: 308 IDTWDSYSAYPSGHFVQTLGCIGDLETETQTILIEHNLVIRNFTDAQLSELAPLSVQRPW 367
Query: 267 EVPQEELLSRKDLR-----------NFCIFTIDPSTATDLDDALSIERLSDGIS------ 309
+V EE+ R+DLR + IF+IDP D+DDALS++ L +
Sbjct: 368 KVDLEEVKKRRDLRSPTISGNPDSEDILIFSIDPPGCQDVDDALSVQWLPPIVDEYGKEH 427
Query: 310 ---RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 366
++GVHIADVSYFV G+ +D EA+ RSTS+Y+ R+ MLP LLS ++ SL G DR
Sbjct: 428 KRLQLGVHIADVSYFVPSGSYIDSEARRRSTSIYLADRRYDMLPGLLSGDLCSLWSGRDR 487
Query: 367 LAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG-KFDVESSNTLGEGWPQ 424
A S+ W+++ + D+ + W GRTVI S KL+YE AQ I D D SSN+
Sbjct: 488 YAVSVLWEIDMDSFDISNIWYGRTVIHSSYKLTYELAQRIYDSVTADNISSNSCA----- 542
Query: 425 LYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF----DEYGTPYDSVL 480
E +SI L +++ ++++R G L LE+ + F G D +
Sbjct: 543 ----VEEFIKNKSILLLVDIASNVRERRLAKGGLELESVEVSVQFANPETRTGKLEDLIP 598
Query: 481 SGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQL 540
+++ E M+ AN A +PD A LRRHP P E + + G L
Sbjct: 599 KEPLEMHNTVAELMIFANHWVARRCVEYYPDRACLRRHPPPRPEYFDELKRCIACRGFVL 658
Query: 541 DTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTD-WGHYAL 599
DTSS+ SL+ A + +D + ++ TR M A YF +G D + HY L
Sbjct: 659 DTSSNLSLANSLKNASD--PNDPEVNKVVRQLVTRTMTNALYFSTGSSNMTQDQFSHYGL 716
Query: 600 AFPVYTHFTSPLRRYPDLVVHRTLNAAL-EAEKLYWKHRRMLPKNNHREGVRGRFLTGIF 658
A +YTHFTSP+RRY D++VHR L A+L + L + KN + G+F
Sbjct: 717 ALNLYTHFTSPIRRYADIIVHRLLLASLGDFRSLTTTQSELNSKNTELVTILENNTDGLF 776
Query: 659 YDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILL 718
++ L ++ H N++ A + V+ + ++L+ +
Sbjct: 777 SSEE-------------------------LASICNHMNEQHWAAQQVQRSSLELFQALFF 811
Query: 719 KKKEV 723
K K V
Sbjct: 812 KDKAV 816
>gi|353228702|emb|CCD74873.1| ribonuclease II-related [Schistosoma mansoni]
Length = 991
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 197/665 (29%), Positives = 303/665 (45%), Gaps = 84/665 (12%)
Query: 91 SSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSR 150
S+Q+N + LS M S P + I RS +VG ++ N W +Y
Sbjct: 204 SAQENCAAEFVNDLSNMSGSKPNEDCFKS--ETISRSLPCGFVVGVISHN-WRDYVCTYV 260
Query: 151 KDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAAR 210
+ +N S S + +I +TP + P + + + ++R R
Sbjct: 261 PKSTEN-SLDSKSESGWIIVTPWDRRIPLIRLHTTQISKLTRERF------------IVR 307
Query: 211 IDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV----PW 266
ID W+ S +P H + G G++E + IL E+ + F+ LS L + PW
Sbjct: 308 IDTWDSYSAYPSGHFVQTLGCIGDLETETQTILIEHNLVIRNFTDAQLSELAPLSVQRPW 367
Query: 267 EVPQEELLSRKDLR-----------NFCIFTIDPSTATDLDDALSIERLSDGIS------ 309
+V EE+ R+DLR + IF+IDP D+DDALS++ L +
Sbjct: 368 KVDLEEVKKRRDLRSPTISGNPDSEDILIFSIDPPGCQDVDDALSVQWLPPIVDEYGKEH 427
Query: 310 ---RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 366
++GVHIADVSYFV G+ +D EA+ RSTS+Y+ R+ MLP LLS ++ SL G DR
Sbjct: 428 KRLQLGVHIADVSYFVPSGSYIDSEARRRSTSIYLADRRYDMLPGLLSGDLCSLWSGRDR 487
Query: 367 LAFSIFWDLN-SAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDG-KFDVESSNTLGEGWPQ 424
A S+ W+++ + D+ + W GRTVI S KL+YE AQ I D D SSN+
Sbjct: 488 YAVSVLWEIDMDSFDISNIWYGRTVIHSSYKLTYELAQRIYDSVTADNISSNSCA----- 542
Query: 425 LYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF----DEYGTPYDSVL 480
E +SI L +++ ++++R G L LE+ + F G D +
Sbjct: 543 ----VEEFIKNKSILLLVDIASNVRERRLAKGGLELESVEVSVQFANPETRTGKLEDLIP 598
Query: 481 SGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQL 540
+++ E M+ AN A +PD A LRRHP P E + + G L
Sbjct: 599 KEPLEMHNTVAELMIFANHWVARRCVEYYPDRACLRRHPPPRPEYFDELKRCIACRGFVL 658
Query: 541 DTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTD-WGHYAL 599
DTSS+ SL+ A + +D + ++ TR M A YF +G D + HY L
Sbjct: 659 DTSSNLSLANSLKNASD--PNDPEVNKVVRQLVTRTMTNALYFSTGSSNMTQDQFSHYGL 716
Query: 600 AFPVYTHFTSPLRRYPDLVVHRTLNAAL-EAEKLYWKHRRMLPKNNHREGVRGRFLTGIF 658
A +YTHFTSP+RRY D++VHR L A+L + L + KN + G+F
Sbjct: 717 ALNLYTHFTSPIRRYADIIVHRLLLASLGDFRSLTTTQSELNSKNTELVTILENNTDGLF 776
Query: 659 YDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILL 718
++ L ++ H N++ A + V+ + ++L+ +
Sbjct: 777 SSEE-------------------------LASICNHMNEQHWAAQQVQRSSLELFQALFF 811
Query: 719 KKKEV 723
K K V
Sbjct: 812 KDKAV 816
>gi|355684013|gb|AER97263.1| DIS3 mitotic control-like protein -like protein [Mustela putorius
furo]
Length = 611
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 162/508 (31%), Positives = 256/508 (50%), Gaps = 55/508 (10%)
Query: 262 PCVPWEVPQEELLSRKDLR-NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSY 320
P PW+V EE RKDLR +F+IDP D+DD LS+ L++G +GVHIADV++
Sbjct: 9 PENPWKVSPEEERERKDLRETHLVFSIDPKGCEDVDDTLSVRTLANGNLELGVHIADVTH 68
Query: 321 FVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAG- 379
FV P + +DIEA+ R+ + Y+ R+ MLP +LS ++ SL GVDR A S+ W+L+
Sbjct: 69 FVPPNSYIDIEARTRAITYYLADRRYDMLPSILSADLCSLLGGVDRYAVSVIWELDKTSY 128
Query: 380 DVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIK 439
++ W RT+IRS KL YE AQ+++DG F + + Q + ++V +I
Sbjct: 129 EIKTVWYSRTIIRSAYKLFYEAAQELLDGNFHIVDDIPEFRDLDEKSRQAKLEELVWAIG 188
Query: 440 SLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANK 499
L E+++ ++ KR GAL LE + DE +D + +++ E M+LAN
Sbjct: 189 KLTEIARHIRAKRDRCGALELEGVEIRVQLDEKKNIHDLIPRQPLEVHETVAECMILANH 248
Query: 500 TAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 559
A+ I +FP ALLR+HP P E G +DT S+ SL+ A +
Sbjct: 249 WVAKKIWESFPHQALLRQHPPPQQEFFSELRECAKAKGFFIDTRSNKTLADSLDNAND-- 306
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
+D ++ +L + AT+ M A YF +G ++ ++ HY LA YTHFTSP+RRY D+VV
Sbjct: 307 PNDPIVNRLLRSMATQAMSNALYFSTGSCAEE-EFHHYGLALDKYTHFTSPIRRYSDIVV 365
Query: 620 HRTLNAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALK 679
HR L AA+ +K +M K+N + +KD E
Sbjct: 366 HRLLMAAISKDK------KMEIKDN------------LLSNKDLEE-------------- 393
Query: 680 YGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRF-- 737
+ H N+R A ++ + +L+ + K K+ +EAR ++ G +
Sbjct: 394 -----------LCRHINNRNRAAQHSQKQSTELFQCMYFKDKDP-ENEARCISDGVIYSI 441
Query: 738 ----MTIYIEKLAIERRIYYDEVEGLIV 761
+ ++I + I+ Y +GL++
Sbjct: 442 RTNGVLVFIPRFGIKGAAYLRNKDGLVI 469
>gi|361124483|gb|EHK96571.1| putative protein SSD1 [Glarea lozoyensis 74030]
Length = 1301
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 186/681 (27%), Positives = 315/681 (46%), Gaps = 106/681 (15%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G +V+++ER + G +G L +Q K + + A+ + R+ +
Sbjct: 520 GHIVAVVERVAGQMFSGTLGLLRPSSQATKEKQEAERQARDGGNGRQHEQRQQDKPKIVW 579
Query: 170 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P D ++K ++ D + A I W S P ++
Sbjct: 580 FKPTDKRVPLIAIPTEQAPRDFVEKHMDYAD-----RIFVACIKRWPITSLHPFGTLVEQ 634
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIF 285
G+ GE++ + +A+L +N FS + W + +E+ + +R+D R+ F
Sbjct: 635 LGKMGELKVETDALLRDNNFASDEFSDAVTRSVGLDDWSLAKEDETAISARRDFRDEKTF 694
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
TIDP+ A +LDDA+ ++ DG +G+HIADV++F+ + +D EA+ RST+V+++ R+
Sbjct: 695 TIDPNGAKELDDAIHVKSEGDGKIEIGIHIADVAHFIKANSLVDREAKKRSTAVFLMNRE 754
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWIGRTVIRSCCKLSYEHA 402
MLP ++ E+ SL PG +RL S+ + +N+ VV D W+G+++I+S KLSY+
Sbjct: 755 SAMLPPKIATEICSLTPGEERLTVSVVFKVNAHTGVVSDEDTWVGKSIIKSSGKLSYKDV 814
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF-TDG----A 457
++ G D+ +L G E D I+ L+ V++ +++R TDG
Sbjct: 815 DAVLTGHVDI-----------KLPG-VEAKD----IQILHAVAQKFREQRLGTDGETIAP 858
Query: 458 LRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR 517
LRL ++ D+ P + + + L EE M AN A+ I P+ A LRR
Sbjct: 859 LRL-----IYQLDDENVPVEHNIFDSTPSHELIEELMHKANAYVAQKIYEGMPEKAFLRR 913
Query: 518 HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPM 577
PN R+L+ F +K G ++DT+SSG SL + DD + + + M
Sbjct: 914 QGPPNPRRLQTFSDRMNKIGFEIDTTSSGSLQNSLFKV-----DDTNIRKGMETLLVKTM 968
Query: 578 QLASYFCSGDFKDDTD-WGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKH 636
A Y+ +G K T + HYAL P+YTHFT+P RRY DLVVHR L A L K
Sbjct: 969 HRAKYYIAG--KTPTHLYPHYALNLPLYTHFTNPSRRYADLVVHRQLEAVLSEGK----- 1021
Query: 637 RRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCN 696
I Y++D + LV CN
Sbjct: 1022 --------------------IEYNED----------------------IETLVKTTESCN 1039
Query: 697 DRKLACRNVKDACVKLYMWILLKKKE-----VLLSEARVLALGPRFMTIYIEKLAIERRI 751
+K + +N ++ + + + KK L++E V+A+ + I + E+R+
Sbjct: 1040 TKKDSAQNAQEQSIHIESCREMDKKREEAGGELITEGIVIAVYDSAFDVLIPEYGFEKRV 1099
Query: 752 YYDEVEGLIVEWLETTSTLVL 772
+ D++ E+ +T L L
Sbjct: 1100 HCDQLPLKKAEFRKTDRILEL 1120
>gi|304382968|ref|ZP_07365449.1| ribonuclease R [Prevotella marshii DSM 16973]
gi|304335887|gb|EFM02136.1| ribonuclease R [Prevotella marshii DSM 16973]
Length = 732
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 159/443 (35%), Positives = 237/443 (53%), Gaps = 27/443 (6%)
Query: 191 IKKRLEEGDATIEMELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC 249
I KR +G T + +V +I +W ES V+ V G G+ + ++N IL + +
Sbjct: 176 IPKRRLKGGHTGDKAVV--KITQWPGRESKNLVGEVVDVLGASGDNDVEMNTILAQYGLP 233
Query: 250 CSGFSPESLS-CLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGI 308
P+++ + E+ + +L R+D R+ TIDP A D DDALSI+RL G+
Sbjct: 234 YK--YPKAVEEAAEKISGEITETDLREREDFRDTFTCTIDPHDAKDFDDALSIKRLDKGL 291
Query: 309 SRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 368
+VGVHIADVS++V G+ +D EAQ R+TSVY++ R IPMLP L + SL P ++LA
Sbjct: 292 WQVGVHIADVSHYVAEGSIIDREAQKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLA 351
Query: 369 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 428
+S+ ++L+ D+ + TVIRS + +YE Q I++ D + G+ P
Sbjct: 352 YSVIFNLDDNADIKTWRLAHTVIRSNRRYAYEEVQQILE---DNGVKDGTGQPAPPAPKG 408
Query: 429 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNF 488
+ ++ +L ++K L++KRF GA++ + + F D+ G P + +D N
Sbjct: 409 GYRGENAEALITLDRLAKHLRNKRFKGGAVKFDREELHFDIDKTGKPVRAYFKMSKDANK 468
Query: 489 LFEEFMLLANKTAAE---VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTS-S 544
L EEFMLLANKT AE ++ + P + R H AP+ KL F K G +L T+ +
Sbjct: 469 LIEEFMLLANKTVAESVGMVKKGKPKTLPYRIHDAPDPTKLETLRQFIVKFGYKLKTAGT 528
Query: 545 SGQFHQSLEQAREKLKDDYVLFD---ILINYATRPMQLASYFCSGDFKDDTDWGHYALAF 601
G+ +SL KL DD + ++ A R M A Y + GHY LAF
Sbjct: 529 KGEVSRSL----NKLLDDVQGRNEQKLIETVALRAMMKAKYSVH-------NIGHYGLAF 577
Query: 602 PVYTHFTSPLRRYPDLVVHRTLN 624
P YTHFTSP+RRYPD +VHR L
Sbjct: 578 PYYTHFTSPIRRYPDTLVHRLLT 600
>gi|353241038|emb|CCA72877.1| probable DIS3 3`-5` exoribonuclease required for 3` end formation
of 5.8S rRNA [Piriformospora indica DSM 11827]
Length = 1006
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 164/454 (36%), Positives = 236/454 (51%), Gaps = 37/454 (8%)
Query: 191 IKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICC 250
I+ R + ++ +++ ID W+ S +P+ H + G+ G E + A+L E +
Sbjct: 438 IRMRTRQAPQLLDQKILVT-IDRWDSTSRYPEGHFVRSLGKVGGKEAEQEALLVEYGVAY 496
Query: 251 SGFSPESLSCLPCV--PWEVP---QEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLS 305
F CLP W VP + R+DLR+ I +IDP D+DDAL L
Sbjct: 497 GAFGKAIQDCLPPEGDSWVVPPKGHDIWKDREDLRDVLICSIDPPGCQDIDDALHARALP 556
Query: 306 DGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVD 365
+G GVHIADVS+FV T +D EA R T+VY++ ++I MLP LL + SL P V+
Sbjct: 557 NGNIEAGVHIADVSHFVHAETPMDSEAAARGTTVYLVDKRIDMLPSLLGTNLCSLRPHVE 616
Query: 366 RLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQL 425
RLAFS+ W+L +V+ ++VI S +YE AQ D + +L + Q
Sbjct: 617 RLAFSVIWELTPEAKIVNVRFTKSVIASKSAFTYEEAQIRKDDQ-------SLKDPLTQ- 668
Query: 426 YGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD--EYGTPYDSVLSGR 483
SI+ L +++ L++ R GAL L + + + E P D +
Sbjct: 669 -----------SIRLLNSLARNLREGRMRAGALNLASPEVKIQMESSESSDPIDVKQKEQ 717
Query: 484 EDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRKLREFEAFCSKHGLQL 540
+ N L EEFMLLAN + A+ I FP +A+LRRH P N L++ GL+L
Sbjct: 718 LETNSLVEEFMLLANISVAKKIQETFPLTAVLRRHMPPPTTNFETLKDI--LMKIKGLKL 775
Query: 541 DTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYAL 599
D SSSG SL+ + + F+ L+ ATR M A YFCSG+ DT +GHY L
Sbjct: 776 DVSSSGALASSLDLC---VDSNEPAFNTLVRIMATRCMLSAEYFCSGNVPRDT-FGHYGL 831
Query: 600 AFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLY 633
A P+YTHFTSP+RRY D++VHR L+AA+ L+
Sbjct: 832 ASPIYTHFTSPIRRYADVLVHRQLSAAINHAPLH 865
>gi|256422681|ref|YP_003123334.1| ribonuclease R [Chitinophaga pinensis DSM 2588]
gi|256037589|gb|ACU61133.1| ribonuclease R [Chitinophaga pinensis DSM 2588]
Length = 705
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 158/454 (34%), Positives = 223/454 (49%), Gaps = 57/454 (12%)
Query: 187 LPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYEN 246
+P + K + GD + R+ W E++ P V+ V + + IL E+
Sbjct: 111 IPANSLKDAKNGDKAV------VRVVAWGEKTRKPVGEVVEVLDASNTNDLAMKEILIES 164
Query: 247 AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 306
S F E L L + + EE+ RKD R FTIDP A D DDA+SI +L
Sbjct: 165 GFPLS-FPDEVLKELNEIQENIDAEEVKKRKDFRKTLTFTIDPVDAKDFDDAISIRKLRG 223
Query: 307 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 366
VGVHIADVS++V P TALD EA R+TSVY+ R +PMLP +S E+ SL P D+
Sbjct: 224 NWYEVGVHIADVSHYVQPDTALDKEADKRATSVYLPDRVLPMLPEKISNELCSLRPHEDK 283
Query: 367 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY 426
L FS + +N G++ + WIGRTVI S + +YE Q++I+ GEG
Sbjct: 284 LTFSAVFKMNDKGEIKENWIGRTVIHSDHRFTYEQVQEVIE----------TGEG----- 328
Query: 427 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL 486
+ D + L ++S+ L+ RF +GA+ + + F DE P V+ ++
Sbjct: 329 ---PYKD---EVLLLNKISQTLRKVRFENGAINFSSQEVRFQLDENAKPIGIVIKESKEA 382
Query: 487 NFLFEEFMLLANKTAAEVIAR---------AFPDSALLRRHPAPNMRKLREFEAFCSKHG 537
+ L EE MLLAN+T AE + FP R H P+ KL+ F AF K G
Sbjct: 383 HQLIEELMLLANRTVAEYVYNIRIGTNQHVPFP----YRVHDTPDEEKLKMFSAFARKFG 438
Query: 538 LQLDTSS----SGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTD 593
+L+ + + F++ L+ A K + +L R M A+Y D
Sbjct: 439 HKLEVDNLEKLARSFNEMLQLAHGKPEQ-----HVLETLGIRTMAKAAYTTD-------D 486
Query: 594 WGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
GHY L F Y HFTSP+RRYPD++VHR L L
Sbjct: 487 IGHYGLGFEHYCHFTSPIRRYPDVLVHRVLQQCL 520
>gi|313204897|ref|YP_004043554.1| RNAse r [Paludibacter propionicigenes WB4]
gi|312444213|gb|ADQ80569.1| RNAse R [Paludibacter propionicigenes WB4]
Length = 712
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 166/528 (31%), Positives = 259/528 (49%), Gaps = 83/528 (15%)
Query: 107 MISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE 166
+ +S ++P G VV II+R+ +D VG L+V+ + + L++ +R
Sbjct: 126 LYASRKGQQPEGEVVEIIKRA--QDTFVGILDVSDSYAF--------------LTLDNR- 168
Query: 167 YIQLTPTHPKYPKMVVLVKDL--PDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
++ D+ P K +L G + + ++ W + P
Sbjct: 169 ---------------IMTNDIFIP---KNKLNGGKSG---QKAVVKLLGWEPNAKNPVGE 207
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCI 284
V+ V G G+ +++AIL E + + + + + + +E+ R D+R+
Sbjct: 208 VIDVLGDKGDNTAEMHAILAEFGLPYK-YPADVEAAAEKIDAGITPDEVAKRIDMRSITT 266
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
FT+DP A D DDALS+ +L DG+ VGVHIADV+++V P + ++ E + R+TSVY++ R
Sbjct: 267 FTVDPRDAKDFDDALSLRKLDDGLWEVGVHIADVTHYVRPDSIIEQEGRERATSVYLVDR 326
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
IPMLP LS + SL P D+L +S+ + +N ++ I +TV RS + +YE AQ
Sbjct: 327 TIPMLPEHLSNGICSLRPDEDKLTYSVIFKMNDKAEIQHYKIAKTVTRSNRRFTYEEAQA 386
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
II+ GEG E+ D + ++ L +KIL+ KRF +GA+ + +
Sbjct: 387 IIE----------TGEG--------EYKDEILTMDRL---AKILRKKRFENGAIAFDRVE 425
Query: 465 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR----AFPDSALLRRHPA 520
F DE G P ++D N + EEFMLLANKT A I + + + R H
Sbjct: 426 VRFEIDEKGKPVSVFFKEQKDSNKMIEEFMLLANKTVATHIGKPGKGQKAKTFVYRIHDV 485
Query: 521 PNMRKLREFEAFCSKHGLQLDTSS-----SGQFHQSLEQAREKLKDDYVLFDILINYATR 575
PN KL F F + G L TS S + L++ + K + +++ A R
Sbjct: 486 PNPDKLNNFAVFIKRFGYNLKTSGKQTAISSSINALLDEVQGKKEQ-----NLIETLAIR 540
Query: 576 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
M A Y S + GHY LAF YTHFTSP+RRYPD++VHR L
Sbjct: 541 SMAKAIYSTS-------NMGHYGLAFDFYTHFTSPIRRYPDMMVHRLL 581
>gi|224025571|ref|ZP_03643937.1| hypothetical protein BACCOPRO_02311 [Bacteroides coprophilus DSM
18228]
gi|224018807|gb|EEF76805.1| hypothetical protein BACCOPRO_02311 [Bacteroides coprophilus DSM
18228]
Length = 753
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 152/433 (35%), Positives = 223/433 (51%), Gaps = 51/433 (11%)
Query: 208 AARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPW 266
+I EW EE+ P V+ + G+ G+ +++AIL E + + P+++ + +
Sbjct: 230 VVKIIEWPEEAKNPFGEVVDILGKAGDNTTEMHAILAEYGLPYT--YPQNVEAAADKLSA 287
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
E+ E+ R+D R+ FTIDP A D DDALSI +L G+ VGVHIADVS++V G+
Sbjct: 288 EITPEDYAEREDFRDVVTFTIDPKDAKDFDDALSIRQLKPGLWEVGVHIADVSHYVKEGS 347
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
+D EA R+TSVY++ R IPMLP L + SL P ++LA+S+ +D+N +V + I
Sbjct: 348 IIDKEAAKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFDMNEKAEVKNYRI 407
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
TVIRS + +YE AQ+II+ GEG D + L +++
Sbjct: 408 CHTVIRSNRRFTYEEAQNIIE----------TGEG-----------DYKEEVLELNRLAQ 446
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
IL++KR GA+ + + F DE G P ++ N L EEFMLLAN+T AE I
Sbjct: 447 ILREKRLAAGAINFDRCEVKFEIDEKGKPVSVYFKVSKEANKLIEEFMLLANRTVAEHIG 506
Query: 507 RA----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS--------GQFHQSLEQ 554
+ P R H P+ KL F ++ G ++ T S + +E
Sbjct: 507 KVPKNRKPKVFPYRIHDLPDPDKLDNLNQFIARFGYKIRTGGSKNEVSKSINRLLGDIEG 566
Query: 555 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 614
+E+ +++ + R MQ A Y + GHY LAF YTHFTSP+RRY
Sbjct: 567 KKEQ--------NLIETVSLRAMQKARYSI-------YNIGHYGLAFDFYTHFTSPIRRY 611
Query: 615 PDLVVHRTLNAAL 627
PDL+VHR L L
Sbjct: 612 PDLMVHRLLTRYL 624
>gi|325294704|ref|YP_004281218.1| ribonuclease R [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065152|gb|ADY73159.1| ribonuclease R [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 704
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 186/565 (32%), Positives = 283/565 (50%), Gaps = 71/565 (12%)
Query: 69 REGYNYINGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSP 128
REGY +++ P V N MN ++ + R G++VS+IER+
Sbjct: 75 REGYGFVD---PINGGKGVFVPGRNMNGAMNGDIVAVEIVKEFKDGRKEGKIVSVIERAI 131
Query: 129 RRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLP 188
++ +VG + K R +P+ + I+ +++ +D
Sbjct: 132 KK--VVGRVE---------------KTRRYCFVIPEDKRIRYD--------ILLTSEDC- 165
Query: 189 DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQIN-AILYENA 247
+++E GD V A I + E+ P +L G+ G P+++ ++
Sbjct: 166 ----EKVENGD------YVVAEIISYPSETRGPVGRLLENLGKTG---PKLDIELIIRKY 212
Query: 248 ICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDG 307
F PE+L + V +E+L R DLR FTID A D DDA++IE+LSDG
Sbjct: 213 DLPVEFPPEALEEAEKISDVVIEEDLKGRVDLREQLCFTIDGENARDFDDAVAIEKLSDG 272
Query: 308 ISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRL 367
++ VHIADVS++V PG+ALD EA R TSVY R IPMLP LS + SLNP VDRL
Sbjct: 273 NYKLYVHIADVSHYVKPGSALDREAYKRGTSVYFPDRCIPMLPEKLSNGICSLNPNVDRL 332
Query: 368 AFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYG 427
F+ +N G VVD I +VI S +L+Y AQ IIDG D E+ +
Sbjct: 333 TFTCEMVINKKGIVVDYKIYESVIHSKARLTYTIAQKIIDG--DKEAID----------- 379
Query: 428 QFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLN 487
++ VV S+K++YE+++IL KR+ G+L + +PV + G P D + R +
Sbjct: 380 --KFPHVVESLKTMYELAQILYKKRYKRGSLDFDLPEPVVVLSTEGEPIDIYRAERLWAH 437
Query: 488 FLFEEFMLLANKTAAEVIA-RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSG 546
+ EEFM+ AN+T AE + +P ++ R H +P+ KL+EF F G+++ + +
Sbjct: 438 RIIEEFMIAANETVAEYMFWTDYP--SVYRIHESPDREKLQEFLNFVRSLGIRVPSVKND 495
Query: 547 QFHQSLEQAREKLKDDYVLFDILINY-ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYT 605
+ L++ E+++ + L+NY R M A Y S D + GH+ LA YT
Sbjct: 496 IQPKMLQKILEEVEGKSE--EKLVNYLMLRTMARAKY--SPD-----NVGHFGLASTYYT 546
Query: 606 HFTSPLRRYPDLVVHRTLNAALEAE 630
HFTSP+RRY DL +HR + AL E
Sbjct: 547 HFTSPIRRYADLQLHRQVKMALNGE 571
>gi|392969383|ref|ZP_10334798.1| ribonuclease R [Fibrisoma limi BUZ 3]
gi|387841577|emb|CCH56856.1| ribonuclease R [Fibrisoma limi BUZ 3]
Length = 811
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 258/543 (47%), Gaps = 100/543 (18%)
Query: 109 SSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVP----- 163
SS +R G+V ++ER R IVG + V W Y G D+KK + +P
Sbjct: 168 SSNRGRRTEGKVAEVVERG--RTEIVGRIEV--WPTY-GFVVPDSKKLYEDIYIPKEKLG 222
Query: 164 -----DREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEES 218
D+ I+LT KYP P + R E
Sbjct: 223 DANDGDKVIIRLT----KYPD--------PRGNRGRFE---------------------- 248
Query: 219 PFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKD 278
V+ V G G+ +++AIL E + + F E + + + +L R+D
Sbjct: 249 ----GEVVTVLGLAGQNNTEMHAILAEFGLPIT-FPAEVEQEAEAISAVLTETDLKGRRD 303
Query: 279 LRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTS 338
+R FTIDP A D DDALS++ L +G +GVHIADV+++V PGT L+ EA R+TS
Sbjct: 304 IREVTTFTIDPVDAKDFDDALSVQILDNGHFEIGVHIADVTHYVKPGTQLEEEAFRRATS 363
Query: 339 VYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLS 398
VY++ R +PMLP LS + SL P D+L FS +++ VV W GRTVI S + S
Sbjct: 364 VYLVDRVVPMLPEKLSNNLCSLRPNEDKLTFSAVFEMTPEAKVVKEWFGRTVIHSNRRFS 423
Query: 399 YEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGAL 458
YE AQ+I++ G+G D + ++ L E++ L+D RF +GA+
Sbjct: 424 YEEAQEILN----------TGQG-----------DYLEELRLLNELAYKLRDVRFKNGAI 462
Query: 459 RLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR----AFPDSAL 514
E + F DE G P R+D N L EEFMLLANK AE + ++ +
Sbjct: 463 NFETVEVRFKLDENGVPLSVYPKIRQDTNKLIEEFMLLANKRVAEFVHSLSKPGQENTMV 522
Query: 515 LRRHPAPNMRKLREFEAFCSKHG--LQLD----TSSSGQFHQSLEQAREKLKDDYVLFDI 568
R H P+ KL++F F + G L+LD + S +F S+E E+ ++
Sbjct: 523 YRIHEGPDEAKLQQFADFAGRLGYKLKLDDEHLSGSMNRFMDSIEGKPEQ--------NM 574
Query: 569 LINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
L A R M A Y D GH+ LAF Y+HFTSP+RRYPD++ HR L L+
Sbjct: 575 LQQLAVRTMSKARYSTE-------DLGHFGLAFRRYSHFTSPIRRYPDMMAHRLLQHYLD 627
Query: 629 AEK 631
K
Sbjct: 628 KGK 630
>gi|426338893|ref|XP_004065475.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like exonuclease 2 [Gorilla
gorilla gorilla]
Length = 604
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/333 (41%), Positives = 186/333 (55%), Gaps = 35/333 (10%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDAPVTKDETTCISQDTRALSEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EEL R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVH
Sbjct: 350 EVLECLPQGLPWTIPPEELSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 407
L G ++D W GRT+IRSC KLSYEHAQ +I+
Sbjct: 470 LTPEGKILDEWFGRTIIRSCTKLSYEHAQSMIE 502
>gi|407926512|gb|EKG19479.1| Ribonuclease II/R [Macrophomina phaseolina MS6]
Length = 1364
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 157/524 (29%), Positives = 261/524 (49%), Gaps = 41/524 (7%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G +V++IER + G +G L +Q K + + A++ S P+R+ +
Sbjct: 576 GHIVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERAAREGGSGRQQPERQQDKPKIVW 635
Query: 170 LTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
PT + P + + + P +R ++ + A I W S P ++
Sbjct: 636 FKPTDKRVPLIAIPTEQAPRDFVERHQD----YANRIFVACIKRWPITSLHPFGTLVEQL 691
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE---ELLSRKDLRNFCIFT 286
G G+++ + +A+L +N FS L + W V + L R+D R FT
Sbjct: 692 GEMGDLKVETDALLRDNNFGPDDFSDAVLRNVGFEDWSVANDGEAALEGRRDFREEQTFT 751
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP+ + +LDDA+ + L DG +G+H+ADV++FV + +D EA+ R T+VY++ R +
Sbjct: 752 IDPNGSKELDDAIHFKSLEDGNLEIGIHVADVAHFVKANSLVDREAKKRGTAVYLMDRAV 811
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLN-SAGDVV--DRWIGRTVIRSCCKLSYEHAQ 403
MLP LS ++ L+PG +R S+ + ++ S G V D +IG+ +I+S KLSYE
Sbjct: 812 NMLPAKLSSDILCLSPGEERYTVSVVFKVDPSTGKVFDDDTFIGKGIIKSSGKLSYEQVD 871
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
II+G+ G + + + I+ L+ +++ L++ RF + + + +
Sbjct: 872 AIINGR-----------------GASDLAVKEQDIQKLHSITQKLREARFGNRSTDIPSL 914
Query: 464 KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
+ ++ D+ P + + + L EE AN A++I + ALLRRH PN
Sbjct: 915 RLLYQLDDENVPVEENIFHSSPSHELIEELSHKANAAVAQLIQAKLGEKALLRRHAGPNP 974
Query: 524 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 583
R+L+ F S G ++D +SSG SL Q + D ++ + + MQ A YF
Sbjct: 975 RRLQTFVDRMSAIGFEIDPTSSGTLQSSLFQVQ-----DPIIRQGMETLLVKTMQRAKYF 1029
Query: 584 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
+G +D W HYAL P+YTHFT+P RRY D++VHR L AAL
Sbjct: 1030 VAGKQAED-QWSHYALNLPLYTHFTNPSRRYADIIVHRQLEAAL 1072
>gi|422870496|ref|ZP_16916989.1| ribonuclease R [Streptococcus sanguinis SK1087]
gi|328946711|gb|EGG40849.1| ribonuclease R [Streptococcus sanguinis SK1087]
Length = 782
Score = 237 bits (604), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 242/451 (53%), Gaps = 30/451 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S FS + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFSEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR IFTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLARRLDLREEIIFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G D E + ++ +V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--DQEKAE-------------QFKAIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
+ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 RLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TLNAALEAEKLYWKHRRMLPKNNHREGVRGR 652
+ +++++ +++P+ + R R
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPEIASQSSSRER 603
>gi|429740789|ref|ZP_19274464.1| ribonuclease R [Porphyromonas catoniae F0037]
gi|429160133|gb|EKY02610.1| ribonuclease R [Porphyromonas catoniae F0037]
Length = 748
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 157/438 (35%), Positives = 222/438 (50%), Gaps = 49/438 (11%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V RI +W+ + P+ V+ V G+ GE +++AIL E + + E +
Sbjct: 203 VVVRILDWDARAKNPRGEVIDVLGKSGENSTEMHAILAEFGLPYK-YPEEVERAAEELSG 261
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
E+ EEL R+D R TIDP A D DDALS LS VGVHIADVS++V PG
Sbjct: 262 EITSEELAQREDFRGVLTCTIDPRDAKDFDDALSFRPLSGNRYEVGVHIADVSHYVQPGG 321
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
+D EA R+TSVY++ R IPMLP LS + SL P D+ A+S + L++ +V I
Sbjct: 322 IIDDEAYRRATSVYLVDRTIPMLPERLSNFLCSLRPDEDKYAYSCIFTLDAEAQLVSARI 381
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
RTVIRS + SYE AQ+IID G G D +I +L+++++
Sbjct: 382 ARTVIRSTRRFSYEEAQEIID----------TGRG-----------DHAEAILTLHQLAQ 420
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
L+ +RF G++ + + F D+ G P + + + L EEFMLLAN+T AE I+
Sbjct: 421 KLRARRFEKGSIAFDRPEVRFELDKDGKPIAVHIKESKPAHQLIEEFMLLANRTVAERIS 480
Query: 507 RA--------------FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSL 552
A P + + R H AP+ KLR F ++ G +L T +++
Sbjct: 481 DASRQDITPALHLKKRTPPTFVYRIHEAPDEEKLRSLSEFVARMGYKLRTEGGA---EAV 537
Query: 553 EQAREKLKDDYV---LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
Q+ KL +D +++ A R M A Y + GHY L F YTHFTS
Sbjct: 538 TQSLNKLLNDIKGKPEENMISMLAIRSMAKARYTTA-------HIGHYGLGFESYTHFTS 590
Query: 610 PLRRYPDLVVHRTLNAAL 627
P+RRYPDL+VHR L L
Sbjct: 591 PIRRYPDLMVHRLLTRYL 608
>gi|380022076|ref|XP_003694881.1| PREDICTED: DIS3-like exonuclease 2-like [Apis florea]
Length = 771
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 159/565 (28%), Positives = 271/565 (47%), Gaps = 80/565 (14%)
Query: 220 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 279
F + + G G++ + NAIL E + + +SP+ + LP + + + +L R+D
Sbjct: 234 FAVGKIEKIVGNIGDIRTESNAILLEYDLDITPYSPDVIKGLPSSDYILTENDLRDREDW 293
Query: 280 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 339
R CIFTIDP A DLDD++S + L + +GVHI+DV++++ + LDI+ R+T++
Sbjct: 294 RQECIFTIDPDAAVDLDDSVSCKILENENYEIGVHISDVTHYMEFLSPLDIQVSKRATTI 353
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 399
YM MLP L ++ SL+P + + F +TVIRSCC++SY
Sbjct: 354 YMTDNVYHMLPKQLC-QICSLSPEIVKYRF-----------------AKTVIRSCCQMSY 395
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
HAQ I+ N + + + G F ++D+ + L+ ++ ++ KRF +GAL+
Sbjct: 396 YHAQKFIEN-----PKNNWPDDFLSINGNFNFNDLSIKVNILHNLAIQMRKKRFQNGALQ 450
Query: 460 LENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
++ K D G P + ++D N L EEFMLLAN T A + P++ALLR H
Sbjct: 451 IDQPKLYVKIDRITGLPISYNIEEQKDSNRLIEEFMLLANMTVATQLYTMIPETALLRNH 510
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY------ 572
P+ L + + G+ LD SS H S+ + + L+++ I + Y
Sbjct: 511 REPSKHILTVTKDTLQRFGIHLDIKSSASLHASIRRYEQGLENENNETKITMKYRMMVIN 570
Query: 573 --ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
++ M A+Y CS + + HYAL P+YTHFTSP+RRY D VVHR L + ++
Sbjct: 571 SLCSKAMTRATYICSSTVTAEEELRHYALNVPLYTHFTSPIRRYSDCVVHRLLYSTMKNV 630
Query: 631 KLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVN 690
+ +PK + K +S
Sbjct: 631 E--------MPKE---------------WSKKLCKS------------------------ 643
Query: 691 VATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERR 750
+A +CN +K + + ++ +LY L+ K +++ VL + F+ + + +L I+ R
Sbjct: 644 IAANCNIKKYSAKMAQERSSELYFTYLIDLKGPIVTMGIVLNVNENFINVILCQLGIKLR 703
Query: 751 IYYDEVEGL-IVEWLETTSTLVLSL 774
+ ++E L ++E+ S +S+
Sbjct: 704 VSITQLEKLAVIEYSSEYSVPTISI 728
>gi|404406212|ref|ZP_10997796.1| RNAse R [Alistipes sp. JC136]
Length = 746
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/434 (33%), Positives = 215/434 (49%), Gaps = 37/434 (8%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
E V RI +W S P ++ G G + +++AIL E + F PE +
Sbjct: 189 EKVVVRIVDWQPGSKSPVGELVERLGMAGNNDTEMHAILAEYELPYR-FEPEIEEAAEAI 247
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
V E+ R+D R FT+DP+ A D DDALS+ ++ DG+ +GVHIADV+++V P
Sbjct: 248 DARVTGREIAERRDFRQVTTFTVDPADAKDFDDALSVRKIKDGVWEIGVHIADVTHYVRP 307
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
+ +D EA R TSVY++ R +PMLP LS E+ SL P L FS + LN D+++
Sbjct: 308 HSVIDDEAVERGTSVYLVDRTVPMLPERLSNELCSLRPHETSLCFSAVFTLNENLDILEE 367
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 444
W GRTVI S + +Y AQ+II+ G G D + +L +
Sbjct: 368 WFGRTVIHSDRRFTYAEAQEIIE----------TGRG-----------DYAEEVLTLNRL 406
Query: 445 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 504
++ L+ +RF +GA+ + + F DE G P +++ N + EEFMLLAN+ AE
Sbjct: 407 AQALRAERFKNGAISFDREEVKFRLDENGKPLGVYFKEQKESNQMIEEFMLLANRRVAEF 466
Query: 505 IARAFPDSA-------LLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 557
+ +S + R H +P+ KL F F + G + + + + +
Sbjct: 467 CGKRRTESGRTAERTMVYRVHDSPSEEKLDRFRQFILRFGHIFKATKGRAVAKEMNKLFK 526
Query: 558 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
++K + + A R M A Y + GHY LAFP YTHFTSP+RRYPD+
Sbjct: 527 QIKGT-TEENAVSTMAVRSMAKAYYTTD-------NIGHYGLAFPYYTHFTSPIRRYPDM 578
Query: 618 VVHRTLNAALEAEK 631
+VHR L L K
Sbjct: 579 MVHRLLARYLAGGK 592
>gi|422859716|ref|ZP_16906360.1| ribonuclease R [Streptococcus sanguinis SK330]
gi|327470599|gb|EGF16055.1| ribonuclease R [Streptococcus sanguinis SK330]
Length = 782
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 159/451 (35%), Positives = 245/451 (54%), Gaps = 30/451 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVVIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L+ R DLR+ FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLVGRLDLRDEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G D E + GQF+ +V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--DEEKA-----------GQFKA--IVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILERMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEDPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TLNAALEAEKLYWKHRRMLPKNNHREGVRGR 652
+ +++++ +++P+ + R R
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPEIASQSSSRER 603
>gi|325954642|ref|YP_004238302.1| ribonuclease R [Weeksella virosa DSM 16922]
gi|323437260|gb|ADX67724.1| ribonuclease R [Weeksella virosa DSM 16922]
Length = 731
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 155/482 (32%), Positives = 237/482 (49%), Gaps = 51/482 (10%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
E V + EW + P + V G + ++++IL E + F E + +
Sbjct: 207 EKVVVELLEWPDGFDSPIGSITEVLGNPENSDVEMHSILLEFGLP-EAFPEEVEAEAQQL 265
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
++ + E+ R+D+R+ FTIDP A D DDALSI+ L +G +GVHIADV+++V P
Sbjct: 266 DTKIDENEVKKRRDMRDILTFTIDPKDAKDFDDALSIQPLENGNWEIGVHIADVTHYVQP 325
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
GT +D EA R+TSVY++ R +PMLP +LS V SL P D+ FS ++L + GDVV
Sbjct: 326 GTLIDQEAYKRATSVYLVDRVVPMLPEILSNNVCSLRPNEDKYTFSGVFELTNEGDVVKS 385
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 444
W GRT I S + SYE AQ++I+GK D I++L +
Sbjct: 386 WFGRTAIHSNHRFSYEEAQELIEGK---------------------TGDYQEEIRTLDRL 424
Query: 445 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 504
+K L+ +R +GA+ + + F D+ P +D N L EEFMLL N+ +E
Sbjct: 425 AKKLRAQRMKEGAINFDKIEVKFQLDQDNNPTGVFFKISKDSNHLIEEFMLLCNRKVSEF 484
Query: 505 IA----RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ--AREK 558
++ + + + R H P+ KL + + F + G +L+ + +S+ + A K
Sbjct: 485 VSLEKGKENGRTYIYRIHDEPDPDKLLDLKKFVIQFGYELEIGERKKTIRSMNRLLADVK 544
Query: 559 LKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
K + + + L A R M A Y + GHY LAF YTHFTSP+RRYPD++
Sbjct: 545 GKPEENMIETL---AMRSMSKAKYSTE-------NIGHYGLAFDYYTHFTSPIRRYPDMI 594
Query: 619 VHRTL-----------NAALEAEKLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESL 667
HR L A E + L+ R L RE + +F+ + + E+
Sbjct: 595 AHRLLQDFLDKKSSPPQATYEDKCLHCSSREKLASEAERESI--KFMQVKYMQEFVGENF 652
Query: 668 EG 669
EG
Sbjct: 653 EG 654
>gi|381214351|ref|NP_001244210.1| DIS3-like exonuclease 2 isoform 2 [Homo sapiens]
gi|21753324|dbj|BAC04324.1| unnamed protein product [Homo sapiens]
Length = 603
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 138/333 (41%), Positives = 185/333 (55%), Gaps = 35/333 (10%)
Query: 76 NGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVG 135
+G P T D T +S + +++R + +VV I+E+ R G
Sbjct: 204 DGDAPVTKDETTCISQDTRALSEKSLQR-------------SAKVVYILEKKHSR-AATG 249
Query: 136 FLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRL 195
FL + A KN R+Y +P+ + P++ V +KD P R
Sbjct: 250 FLKLL------------ADKNSELF----RKYALFSPSDHRVPRIYVPLKDCPQDFVARP 293
Query: 196 EEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSP 255
++ T L RI +W E+ F + G+ GE+EP+ IL E + S FS
Sbjct: 294 KDYANT----LFICRIVDWKEDCNFALGQLAKSLGQAGEIEPETEGILTEYGVDFSDFSS 349
Query: 256 ESLSCLP-CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVH 314
E L CLP +PW +P EE R+DLR CIFTIDPSTA DLDDALS + L+DG +VGVH
Sbjct: 350 EVLECLPQGLPWTIPPEEFSKRRDLRKDCIFTIDPSTARDLDDALSCKPLADGNFKVGVH 409
Query: 315 IADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWD 374
IADVSYFV G+ LD A R+TSVY++Q+ +PMLP LL EE+ SLNP D+L FS+ W
Sbjct: 410 IADVSYFVPEGSDLDKVAAERATSVYLVQKVVPMLPRLLCEELCSLNPMSDKLTFSVIWT 469
Query: 375 LNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIID 407
L G ++D W GRT+IRSC KLSYEHAQ +I+
Sbjct: 470 LTPEGKILDEWFGRTIIRSCTKLSYEHAQSMIE 502
>gi|373458756|ref|ZP_09550523.1| ribonuclease R [Caldithrix abyssi DSM 13497]
gi|371720420|gb|EHO42191.1| ribonuclease R [Caldithrix abyssi DSM 13497]
Length = 740
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 168/518 (32%), Positives = 256/518 (49%), Gaps = 77/518 (14%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
KR G V +++R R+ IVG + N +++Y + P
Sbjct: 124 KRFEGFVRRVVKRF--REFIVGTYHRNPYYSY------------------------VVPD 157
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
PK + +++ D + L+ D + V + + W + P+ ++ + G
Sbjct: 158 DPKVYRDIIVAPD------RSLDAKDG----QKVIVKFERWERDEHNPEGTIIEILGDKD 207
Query: 234 EVEPQINAILYENAICCSGFSPESLSC-LPCVPWEVPQEELLSRKDLRNFCIFTIDPSTA 292
I +I Y + PE++ P ++ +L R DLRN FTIDP A
Sbjct: 208 TPGVDIVSIAYSFNLPIR--FPEAVEKDAREAPEKITAADLKGRLDLRNEVCFTIDPHDA 265
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
D DDA+S++ L +G +GVHIADVS++V P TALD EA R TSVYM+ R +PMLP
Sbjct: 266 KDFDDAVSLKLLDNGNFELGVHIADVSHYVKPDTALDKEAYRRGTSVYMVDRVVPMLPER 325
Query: 353 LSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDV 412
LS ++ SL P DRL FS ++N G+VV+ I +VI S + SYE QDI+DGK D
Sbjct: 326 LSNQLCSLRPNEDRLTFSCIMEINRKGEVVNYKIAPSVINSNRRFSYEEVQDILDGKTDD 385
Query: 413 ESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEY 472
++++++ + +L E IL +KRFT+G + E + F+ DE
Sbjct: 386 -----------------PYAEILKQMDALRE---ILMNKRFTEGGIDFETPEVKFVLDEK 425
Query: 473 GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSA-----LLRRHPAPNMRKLR 527
G P + V R + + L EEFML+ANKT A+ I + P+ + R H P+ K+
Sbjct: 426 GKPVEIVPQKRLNSHRLVEEFMLIANKTVAQHIKKISPNKQAPLPFIYRVHEKPDEEKMN 485
Query: 528 EFEAFCSKHGLQLD--TSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCS 585
F F S + + ++ Q+L + + K++ ++ ++ A R M A Y
Sbjct: 486 RFFNFLSAMRVPFKPVKRVTSRYLQNLLASIKGTKEEVIIEEV----ALRSMMKAVY--- 538
Query: 586 GDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTL 623
+ + GH+ L F YTHFTSP+RRYPDLVVHR L
Sbjct: 539 ----SEQNIGHFGLGFKDYTHFTSPIRRYPDLVVHRLL 572
>gi|402846031|ref|ZP_10894350.1| ribonuclease R [Porphyromonas sp. oral taxon 279 str. F0450]
gi|402268583|gb|EJU17950.1| ribonuclease R [Porphyromonas sp. oral taxon 279 str. F0450]
Length = 755
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 157/437 (35%), Positives = 221/437 (50%), Gaps = 47/437 (10%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVP 265
V RI +W+ +S P+ V+ + G+ G+ +++AIL E + S PE++ +
Sbjct: 206 VVVRITDWDRKSKNPRGEVVDILGKAGDNSTEMHAILAEFGLPYS--YPEAVEKAAEALS 263
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
E+ +EEL R+D R TIDP A D DDALS L +G VGVHIADVS++V PG
Sbjct: 264 AEITEEELAQREDFRGVLTCTIDPRDAKDFDDALSFRSLPEGGYEVGVHIADVSHYVQPG 323
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
+ +D EA R+TSVY++ R IPMLP LS + SL P D+ A+S + L+ +
Sbjct: 324 SIIDDEAYKRATSVYLVDRTIPMLPERLSNFLCSLRPDEDKYAYSCIFSLDEEAQLRSAR 383
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 445
I RTVIRS + +YE AQ+II+ G+G D +I +L+ ++
Sbjct: 384 IARTVIRSQRRFTYEEAQEIIE----------TGKG-----------DHAEAILTLHRLA 422
Query: 446 KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVI 505
+ L+ +RF G++ + + F DE G P + + + L EEFMLLAN+T AE I
Sbjct: 423 QKLRARRFEVGSIAFDRPEVRFELDEEGKPLSVYIKESKPAHQLIEEFMLLANRTVAERI 482
Query: 506 A--------------RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDT-SSSGQFHQ 550
A R + + R H AP+ KLR + + G +L S +
Sbjct: 483 AEPARKDISPALRLGRGGKPAFVYRIHEAPDEEKLRSLADYVRRFGYKLKVEGGSSVIAK 542
Query: 551 SLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSP 610
SL +K D+L A R M A Y T GHY L F YTHFTSP
Sbjct: 543 SLNALLADIKGK-PEEDMLTMLAIRSMAKARYTT-------THIGHYGLGFDSYTHFTSP 594
Query: 611 LRRYPDLVVHRTLNAAL 627
+RRYPDL+VHR L L
Sbjct: 595 IRRYPDLMVHRLLTRYL 611
>gi|422847110|ref|ZP_16893793.1| ribonuclease R [Streptococcus sanguinis SK72]
gi|325687303|gb|EGD29325.1| ribonuclease R [Streptococcus sanguinis SK72]
Length = 782
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 154/440 (35%), Positives = 237/440 (53%), Gaps = 30/440 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPEAPTESDLAGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G E Q + ++V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAGN---------QEKAEQ------FKEIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMESVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + ++GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNYGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TLNAALEAEKLYWKHRRMLP 641
+ +++++ +++P
Sbjct: 573 MVRNYGKSKEIAEHFEQVIP 592
>gi|325090058|gb|EGC43368.1| cell wall biogenesis protein phosphatase Ssd1 [Ajellomyces capsulatus
H88]
Length = 1382
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 183/661 (27%), Positives = 299/661 (45%), Gaps = 101/661 (15%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G VV++IER + G +G L +Q K + + A+ S DR+ +
Sbjct: 591 GHVVAVIERVAGQMFAGSLGLLRPSSQATKEKQEAERQARDGGHSRHHHDRQQDKPKIVW 650
Query: 170 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P D ++K E + + A I W S P ++
Sbjct: 651 FKPTDKRVPLIAIPTEQAPRDFVEKHAEYAN-----NIFVACIKRWPITSLHPFGTLVEQ 705
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIF 285
G G ++ + +A+L +N FS L + W V E L +R+D R F
Sbjct: 706 LGAMGNLKVETDALLRDNNFASDEFSDAVLKNVGFEKWSVKDEGEALLENRRDFRGETTF 765
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
TIDP+ +LDDA+ ++ L DG VG+H+ADV++F+ + +D EA+ R T VY++ R
Sbjct: 766 TIDPNGYKELDDAIHVKSLPDGKVEVGIHVADVAHFIKSNSLVDREAKKRGTGVYLMNRV 825
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKLSYEHAQ 403
+ M+P L+ E+ SL PG +RL S+ + +NSA V + WIG+ VI+S KL+Y+
Sbjct: 826 VNMIPPRLATEICSLLPGEERLTVSVIFQVNSATGSVEGEPWIGKGVIKSSGKLTYDEVD 885
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
I++G DVE L+G IK+L +++ K RF + + + +
Sbjct: 886 AILNGNSDVE-----------LHGA-----TANDIKTLSDIASKFKKARFGNRSSNIPSL 929
Query: 464 KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
+ ++ D+ P + + + L EE AN A+ + A PD A LRR PN+
Sbjct: 930 RLLYQLDDENVPVEQNIFNSTPAHELIEELSHKANSFVAKKLLSAIPDKAFLRRQAPPNV 989
Query: 524 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYAT---RPMQLA 580
R+L+ F ++ G +D +SSG SL K++D DI T + MQ A
Sbjct: 990 RRLQTFVDRMTRLGYDIDPTSSGTLQTSL----FKIED----VDIRKGMETLLLKAMQRA 1041
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRML 640
Y+ +G+ +D HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1042 KYYVAGNMTEDQRQ-HYVLNLPVYTHFTNPSRRYADIIVHRQLEAVLS------------ 1088
Query: 641 PKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKL 700
+ + + +E L A CN++K
Sbjct: 1089 -------------------NSECTDDVEN------------------LTKTAEQCNNKKD 1111
Query: 701 ACRNVKDACVKLYMWILLKKKEV-----LLSEARVLALGPRFMTIYIEKLAIERRIYYDE 755
+ + ++ V + ++ KK L+SE VL + + I + E+R++ D+
Sbjct: 1112 SAQTAQEQSVHIESCRIMDKKRSEIGGDLISEGIVLCVYESAFDVLIPEYGFEKRVHCDQ 1171
Query: 756 V 756
+
Sbjct: 1172 L 1172
>gi|225560053|gb|EEH08335.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 1414
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 183/661 (27%), Positives = 300/661 (45%), Gaps = 101/661 (15%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G VV++IER + G +G L +Q K + + A+ S DR+ +
Sbjct: 623 GHVVAVIERVAGQMFAGSLGLLRPSSQATKEKQEAERQARDGGHSRHHHDRQQDKPKIVW 682
Query: 170 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P D ++K E + + A I W S P ++
Sbjct: 683 FKPTDKRVPLIAIPTEQAPRDFVEKHAEYAN-----NIFVACIKRWPITSLHPFGTLVEQ 737
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIF 285
G G ++ + +A+L +N FS L + W V E L +R+D R+ F
Sbjct: 738 LGAMGNLKVETDALLRDNNFASDEFSDAVLKNVGFEKWSVKDEGEALLENRRDFRDETTF 797
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
TIDP+ +LDDA+ ++ L DG VG+H+ADV++F+ + +D EA+ R T VY++ R
Sbjct: 798 TIDPNGYKELDDAIHVKSLPDGKVEVGIHVADVAHFIKSNSLVDREAKKRGTGVYLMNRV 857
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKLSYEHAQ 403
+ M+P L+ E+ SL PG +RL S+ + +NSA V + WIG+ VI+S KL+Y+
Sbjct: 858 VNMIPPRLATEICSLLPGEERLTVSVIFQVNSATGSVEGEPWIGKGVIKSSGKLTYDEVD 917
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
I++G DVE L+G IK+L +++ K RF + + + +
Sbjct: 918 AILNGNSDVE-----------LHGA-----TANDIKTLSDIASKFKKARFGNRSSNIPSL 961
Query: 464 KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
+ ++ D+ P + + + L EE AN A+ + A PD A LRR PN+
Sbjct: 962 RLLYQLDDENVPVEQNIFNSTPAHELIEELSHKANSFVAKKLLSAIPDKAFLRRQAPPNV 1021
Query: 524 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYAT---RPMQLA 580
R+L+ F ++ G +D +SSG SL K++D DI T + MQ A
Sbjct: 1022 RRLQTFVDRMTRLGYDIDPTSSGTLQTSL----FKIED----VDIRKGMETLLLKAMQRA 1073
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRML 640
Y+ +G+ +D HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1074 KYYVAGNMTEDQRQ-HYVLNLPVYTHFTNPSRRYADIIVHRQLEAVLS------------ 1120
Query: 641 PKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKL 700
+ + + +E L A CN++K
Sbjct: 1121 -------------------NSECTDDVEN------------------LTKTAEQCNNKKD 1143
Query: 701 ACRNVKDACVKLYMWILLKKKEV-----LLSEARVLALGPRFMTIYIEKLAIERRIYYDE 755
+ + ++ V + ++ KK L+SE VL + + I + E+R++ D+
Sbjct: 1144 SAQTAQEQSVHIESCRIMDKKRSEIGGDLISEGIVLCVYESAFDVLIPEYGFEKRVHCDQ 1203
Query: 756 V 756
+
Sbjct: 1204 L 1204
>gi|328725480|ref|XP_003248494.1| PREDICTED: exosome complex exonuclease RRP44-like [Acyrthosiphon
pisum]
Length = 518
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 141/362 (38%), Positives = 207/362 (57%), Gaps = 25/362 (6%)
Query: 271 EELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDI 330
++ + RKD R+ I ++DP TD+DDAL L +G +VGVHIADV++FV PGTA+D+
Sbjct: 6 QDFVGRKDFRDLDICSVDPPGCTDIDDALHCMPLDNGNFQVGVHIADVTHFVKPGTAIDL 65
Query: 331 EAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTV 390
EA R+T+VY+ R+I M+P LLS + SL G +RLAFS W++ D+V+ ++V
Sbjct: 66 EASQRATTVYLTGRRIDMVPGLLSSNLCSLRGGEERLAFSCVWEMTPNADIVNSTYTKSV 125
Query: 391 IRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKD 450
I+S ++Y+ AQ IID D N++ G ++ L + +KILK
Sbjct: 126 IKSKAAMTYDQAQLIID---DQNQDNSIALG----------------LRQLNKFAKILKK 166
Query: 451 KRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAF 509
+R GAL L + + FL D E P D + ++ N + EEFMLLAN A+ I F
Sbjct: 167 RRIEAGALVLASPEIRFLVDNETRDPLDVEVKQLKETNSMVEEFMLLANVEVAKKIYSDF 226
Query: 510 PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDIL 569
P+ A+LRRHP P + G++L+ +S SL++A +K D F+ +
Sbjct: 227 PEFAVLRRHPKPPPSNFESLIKAAAHLGVELNVDTSRDLANSLDKA---VKLDNPFFNTM 283
Query: 570 IN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE 628
+ ATR M A YF SG K ++ HY LA P+YTHFTSP+RRY D++VHR L ++
Sbjct: 284 LRILATRCMLQAVYFASGT-KTYDEFLHYGLAAPIYTHFTSPIRRYADVMVHRLLAVSVA 342
Query: 629 AE 630
+
Sbjct: 343 VD 344
>gi|384494201|gb|EIE84692.1| hypothetical protein RO3G_09402 [Rhizopus delemar RA 99-880]
Length = 1080
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 176/656 (26%), Positives = 317/656 (48%), Gaps = 110/656 (16%)
Query: 118 GRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKY 177
G VV+I+ER+ + G L +++ N K ++ + ++S P + T +
Sbjct: 363 GVVVAILERA-QNQVFSGTLTLSRP-NNKRAQMQEEEGDKSKKDAP--RIVWFKATDKRV 418
Query: 178 PKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEP 237
P + + ++ +P+ + E L I W S P + G ++
Sbjct: 419 PLIAIPIEQVPEDFVENTE----AYANRLFVGSIKRWPITSLHPFGTLETELGPITGLDV 474
Query: 238 QINAILYENAICCSGFSPESLSCLPCVPWE-VPQEELLSRKDL--RNFC-IFTIDPSTAT 293
Q+ AIL + + + FS + C+P P+ +P E +R+DL + C + TIDP+ +T
Sbjct: 475 QVKAILADANVTDAPFSEPVMQCIPPTPFSFIPSAEE-NRRDLTTESHCRMITIDPAGST 533
Query: 294 DLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLL 353
+D +++ RL D VGVH+ D+SYF+ P + LD EA+ R VY+ +++PMLP L
Sbjct: 534 LFEDGITVVRLGDDTFEVGVHVCDISYFIKPHSPLDKEARARGVHVYLDHKQVPMLPTEL 593
Query: 354 SE----EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
++ + L P A SI W L++ G ++D W G+T++RS +LSY++ + IIDG
Sbjct: 594 ADAANFTLNELKP-----AMSIIWKLSTDGTLLDTWFGKTIVRSNAQLSYDNVEKIIDG- 647
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
S + GE ++ I+ L+ ++ L + R+T A+ L +K ++
Sbjct: 648 -----SESQGE------------EIDNDIRLLHRLATRLYENRYTKQAMSL--AKQRIVY 688
Query: 470 DEYGTPYDSVLSGRE-DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLRE 528
D+ P + +S + ++ + +EF+ LAN++ A+ I+ +P+ ALLRR P+ RK+ E
Sbjct: 689 DDPTKPSTATISDKNPEIAKVIKEFLFLANQSVAQKISSQYPEQALLRRQSPPDSRKINE 748
Query: 529 FEAFCSKH-GLQLDTSSSGQFHQSLEQARE-KLKDDYVLFDILINYATRPMQLASYFCSG 586
+ + S + ++LD +S+ S+++ +L+ L IL+ P YFC+G
Sbjct: 749 LKEYASNYLNVELDITSATTIQNSVQKIENPELRQ---LISILVLKTIEP---PKYFCAG 802
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHR 646
F D + H+A+ P++THFT+PLRRY D++VHR L AAL +K ++
Sbjct: 803 AF-DILKYSHFAIGAPLFTHFTAPLRRYADIIVHRQLEAALVGDKHFY------------ 849
Query: 647 EGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLAC--RN 704
+ C D + +A HCN +K A N
Sbjct: 850 -----------------------------------LAC-DTIQKLAQHCNVKKEASLEAN 873
Query: 705 VKDACVKLYMWILLKKK--------EVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
+ + L ++++ K++ + EARV+A+ + + + + +ERRI+
Sbjct: 874 HQGKLLSLALYLVSKQQPQTPESTPTTVYGEARVIAVMEDWFDVSLPEFGLERRIH 929
>gi|262341063|ref|YP_003283918.1| ribonuclease R [Blattabacterium sp. (Blattella germanica) str. Bge]
gi|262272400|gb|ACY40308.1| ribonuclease R [Blattabacterium sp. (Blattella germanica) str. Bge]
Length = 643
Score = 235 bits (600), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 151/435 (34%), Positives = 227/435 (52%), Gaps = 57/435 (13%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V +I W +E P ++ +FG+ GE + +I ++L E I FS E
Sbjct: 108 VMVQIISWPKELKNPLGKIIKIFGKSGEYKTEIFSLLEEYGIHYE-FSKEV--------- 157
Query: 267 EVPQEELLSRK--------DLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADV 318
E +++ SRK D+RN FTIDP A D DDALSI +L+D I +GVHI+DV
Sbjct: 158 ENEAQKIFSRKISDKSIRRDMRNINTFTIDPLNAKDFDDALSIRKLNDDIWEIGVHISDV 217
Query: 319 SYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSA 378
S++V G+ LD EA RSTS+Y + + IPMLP +LS ++ SL P D+L+FS ++++S
Sbjct: 218 SHYVEEGSLLDKEAYSRSTSIYFVGKVIPMLPKILSNDLCSLQPKEDKLSFSYIFNIDSQ 277
Query: 379 GDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSI 438
G+++ W G+T+IRS + +YE Q IID K G+ + ++Y
Sbjct: 278 GEILKSWFGKTIIRSNKRFTYEEVQKIIDKK--------KGDFYEEIY------------ 317
Query: 439 KSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLAN 498
+L+ +SKIL KR +G++ LE + F DE P L D + L EEFMLLAN
Sbjct: 318 -TLFFLSKILTKKRLKNGSIDLETVEVKFHLDEKKNPISLHLEKNNDAHRLIEEFMLLAN 376
Query: 499 KTAAEVIARAF---PDSALL--RRHPAPNMRKLREFEAFCSKHGLQLDTSS-SGQFHQSL 552
+ +E ++ F P + L R H P+ +K+ + G LD + + L
Sbjct: 377 RKISEFVSLNFNGNPSNRLFIYRVHDKPDFQKIFLIKKIIEPLGYFLDFKNLKTSINCLL 436
Query: 553 EQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLR 612
++ + K + +++ N R M A Y + GHY L+F YTHFTSP+R
Sbjct: 437 KKIKGKPEQ-----NMIENLILRSMSKAKY-------STKNIGHYGLSFFYYTHFTSPIR 484
Query: 613 RYPDLVVHRTLNAAL 627
RY D++ HR L+ L
Sbjct: 485 RYSDIIAHRLLHYYL 499
>gi|449305216|gb|EMD01223.1| hypothetical protein BAUCODRAFT_144773 [Baudoinia compniacensis UAMH
10762]
Length = 1413
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 164/526 (31%), Positives = 258/526 (49%), Gaps = 43/526 (8%)
Query: 118 GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDRE-----YIQL 170
G VV++IER P + G +G L + + + ++ + S P+R+ +
Sbjct: 616 GHVVAVIERVPGQMFSGTLGLLRPSSQATKEKQEAERREREGGNFSRPERQNERPKIVWF 675
Query: 171 TPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFG 230
PT + P + + + P +R ++ ++ A I W S P ++ G
Sbjct: 676 KPTDKRVPLIAIPTEQAPKDFVERHQD----YANKIFVACIKRWPITSLHPFGTLVEQLG 731
Query: 231 RGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP---QEELLSRKDLRNFCIFTI 287
G++ + +A+L +N FS + W V + L R+D R+ FTI
Sbjct: 732 DAGDLRVETDALLRDNNFGPDDFSEAVAKSVGYEEWSVAADGEAALAGRRDFRDDKTFTI 791
Query: 288 DPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIP 347
DP+ + +LDDAL ++ L DG+ +G+H+AD+++FV + +D EA+ R T VY++ R +
Sbjct: 792 DPNGSKELDDALHLKDLGDGMVEIGIHVADMAHFVKANSLVDREAKKRGTGVYLMNRSVN 851
Query: 348 MLPVLLSEEVGSLNPGVDRLAFSIFWDLNSA-GDVVDR--WIGRTVIRSCCKLSYEHAQD 404
MLP LS+E+ L+PG +R S+ + +N+A G VVD WIG+ VIRS KL+YE
Sbjct: 852 MLPPKLSQEICCLSPGEERYTVSVVFKVNAATGRVVDEQTWIGKGVIRSDGKLAYEEVDA 911
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
+I+GK SS+++ E Q I LY +++ + RF G + + +
Sbjct: 912 VINGK---PSSSSIDEARKQ------------QILMLYGITQKFRQARF--GGADVVDVQ 954
Query: 465 PVFLF---DEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
P+ LF D+ P + + + + EE N AE I A PD ALLRR P
Sbjct: 955 PLRLFYQLDDENVPVEQNIFDSSPSHEMIEELSHKTNAMVAERIFAAMPDRALLRRQANP 1014
Query: 522 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 581
N R+L+ F S G+++D SSS SL + +D + + + M A
Sbjct: 1015 NPRRLQTFAERMSNIGIEIDISSSAALQNSLFRI-----EDADIRKGMETLVIKSMLRAK 1069
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
YF D+ HYAL P+YTHFT+P RRY D+VVHR L A L
Sbjct: 1070 YFVPAKIPDEF-LSHYALNLPLYTHFTNPSRRYADIVVHRQLEAVL 1114
>gi|262282697|ref|ZP_06060465.1| ribonuclease R [Streptococcus sp. 2_1_36FAA]
gi|262261988|gb|EEY80686.1| ribonuclease R [Streptococcus sp. 2_1_36FAA]
Length = 782
Score = 235 bits (599), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 232/419 (55%), Gaps = 27/419 (6%)
Query: 236 EPQINAI-LYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 294
+P I+ + + E+ S F + L VP + +L R DLR+ FTID + A D
Sbjct: 210 DPGIDVLEVLESMDIVSEFPEKVLEEADRVPDAPTESDLEGRLDLRDEITFTIDGADAKD 269
Query: 295 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 354
LDDA+ I+RL +G +GVHIADVSY+V G+ LD EA R+TSVY+ R +PMLP LS
Sbjct: 270 LDDAVHIKRLKNGNFELGVHIADVSYYVKEGSELDKEALNRATSVYVTDRVVPMLPERLS 329
Query: 355 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 414
+ SLNP VDRL S ++++ G VV I +TVI++ +++Y DII G D E
Sbjct: 330 NGICSLNPNVDRLTQSAIMEIDAKGRVVKHTITQTVIKTTFRVTYSDVNDIIAG--DEEK 387
Query: 415 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT 474
+ GQF+ +V SI S+ ++ +IL++ RF GAL + ++ + ++ G
Sbjct: 388 A-----------GQFKA--IVPSIDSMVQLHEILENMRFKRGALNFDTNEAKIMVNKEGR 434
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFC 533
P D VL R + E FML+AN+T AE A+ P + R H P K+++F +
Sbjct: 435 PVDIVLRQRGIAERMIESFMLVANETVAEHFAKLNLP--FIYRIHEEPKAEKVQKFIDYA 492
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTD 593
S G+++ ++S Q+L++ + +KD D+L R MQ A Y + +
Sbjct: 493 SSFGIRIYGTASSMSQQALQEIMKAVKDQ-PYEDVLSMMLLRSMQQARY-------SEHN 544
Query: 594 WGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGR 652
GHY LA YTHFTSP+RRYPDL+VHR + +++++ +++P+ ++ R R
Sbjct: 545 HGHYGLAAEFYTHFTSPIRRYPDLLVHRMVRDYGKSKEIAAHFEQVIPEIANQSSSRER 603
>gi|328786136|ref|XP_624734.3| PREDICTED: DIS3-like exonuclease 2-like [Apis mellifera]
Length = 769
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 158/565 (27%), Positives = 271/565 (47%), Gaps = 80/565 (14%)
Query: 220 FPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL 279
F + + G G++ + NAIL E + + +SP+ + LP + + + +L R+D
Sbjct: 232 FAVGKIEKIVGNIGDIRTESNAILLEYDLDVTPYSPDIIKGLPSSDYILTENDLRDREDW 291
Query: 280 RNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSV 339
R CIFTIDP A DLDD++S + L + +GVHI+DV++++ + LDI+ R+T++
Sbjct: 292 RQECIFTIDPDAAVDLDDSVSCKILENENYEIGVHISDVTHYMEFLSPLDIQVSKRATTI 351
Query: 340 YMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSY 399
YM MLP L ++ SL+P + + F +T+IRSCC++SY
Sbjct: 352 YMTDNVYHMLPKQLC-QICSLSPEIVKYRF-----------------AKTIIRSCCQMSY 393
Query: 400 EHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALR 459
HAQ I+ N + + + G F ++D+ + L+ ++ ++ KRF +GAL+
Sbjct: 394 YHAQKFIEN-----PKNNWPDDFLSINGNFNFNDLSIKVNILHNLAIQMRKKRFQNGALQ 448
Query: 460 LENSKPVFLFDEY-GTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH 518
++ K D G P + ++D N L EEFMLLAN T A + P++ALLR H
Sbjct: 449 IDQPKLYVKIDRITGLPISYNIEEQKDSNRLIEEFMLLANMTVATQLYTMIPETALLRNH 508
Query: 519 PAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINY------ 572
P+ L + + G+ LD SS H S+ + + L+++ I + Y
Sbjct: 509 REPSKHILTVTKDTLQRFGIHLDIKSSASLHASIRRYEQGLENENNETKITMKYRMMVIN 568
Query: 573 --ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
++ M A+Y CS + + HYAL P+YTHFTSP+RRY D VVHR L + ++
Sbjct: 569 SLCSKAMTRATYICSSTVTAEEELRHYALNVPLYTHFTSPIRRYSDCVVHRLLYSTMKNV 628
Query: 631 KLYWKHRRMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVN 690
+ +PK + K +S
Sbjct: 629 E--------MPKE---------------WSKKLCKS------------------------ 641
Query: 691 VATHCNDRKLACRNVKDACVKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERR 750
+A +CN +K + + ++ +LY L+ K +++ VL + F+ + + +L I+ R
Sbjct: 642 IAANCNIKKYSAKMAQERSSELYFTYLIDLKGPIVTMGIVLNVNENFINVILCQLGIKLR 701
Query: 751 IYYDEVEGL-IVEWLETTSTLVLSL 774
+ ++E L ++E+ S +S+
Sbjct: 702 VSITQLEKLAVIEYSSEYSVPTISI 726
>gi|193216324|ref|YP_001997523.1| ribonuclease R [Chloroherpeton thalassium ATCC 35110]
gi|193089801|gb|ACF15076.1| ribonuclease R [Chloroherpeton thalassium ATCC 35110]
Length = 758
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 169/486 (34%), Positives = 242/486 (49%), Gaps = 72/486 (14%)
Query: 154 KKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDE 213
++NR + +PD I P++ + +KD D+ ++GD + +L
Sbjct: 186 RRNRKFMLIPDNSRI--------LPEINIKLKDSQDA-----KDGDKVVVHQLA------ 226
Query: 214 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEEL 273
++++ QA V + G G +I +I I + F L +P + +
Sbjct: 227 FHKDGSI-QAVVKDILGPAGSSAVEITSIARSLGIDET-FPDAVLEETRQIPETIVESVF 284
Query: 274 LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 333
+R DLR +FTIDP A D DDALSIE L G VG+HIADVS+FV G+ LDIEAQ
Sbjct: 285 ENRLDLRAKSVFTIDPFDAKDFDDALSIEDLGSGKYEVGIHIADVSHFVTEGSLLDIEAQ 344
Query: 334 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 393
RSTSVY++ R IPMLP +LSE V SL P DRLA+S LN G+V+D +T+I S
Sbjct: 345 RRSTSVYLVDRVIPMLPSMLSENVCSLRPKEDRLAYSALVQLNDEGNVLDYRFEKTLINS 404
Query: 394 CCKLSYEHAQDII-DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKR 452
+ +YE AQ II GK G+F + ++ L + K+L KR
Sbjct: 405 KRRFTYEEAQKIISSGK-----------------GEFCY-----ELQLLNSLGKLLSAKR 442
Query: 453 FTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDS 512
F +G + + + F DE G P + + R + + L EEFMLLAN+ A I+ + D
Sbjct: 443 FENGGIDFDTEEIKFRLDEKGEPIELIKKIRLESHRLIEEFMLLANRLVAMHISSKYQDK 502
Query: 513 -----ALLRRHPAPNMRKLREFEAFCSKHGLQLD---------TSSSGQFHQSLEQAREK 558
++ R H +P ++ + F +K G +L+ T SS LEQ +
Sbjct: 503 KHEYPSIFRVHDSPRPERIVQLSEFVTKLGFKLELKKNALNNPTVSSKGLRSLLEQVKGS 562
Query: 559 LKDDYVLFDILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
+IL+N A R M A Y + + GH+ L F YTHFTSP+RRYPDL
Sbjct: 563 ------NVEILVNEIALRSMAKAIYH-------EKNIGHFGLGFDYYTHFTSPIRRYPDL 609
Query: 618 VVHRTL 623
+VHR L
Sbjct: 610 IVHRLL 615
>gi|295131900|ref|YP_003582576.1| ribonuclease R [Zunongwangia profunda SM-A87]
gi|294979915|gb|ADF50380.1| ribonuclease R [Zunongwangia profunda SM-A87]
Length = 736
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 148/428 (34%), Positives = 214/428 (50%), Gaps = 21/428 (4%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V D+W +++ P + V G G +I++IL + + F E +
Sbjct: 192 VLVEFDDWPKKADSPFGVITRVLGTPGHHNTEIHSILAQYGLPAD-FPEEVEEFANKIDT 250
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+ +E+ R+D+R+ FTIDP A D DDALS +L +G +GVHIADVS+++ P T
Sbjct: 251 SISDQEIKKRRDMRDVLTFTIDPKDAKDFDDALSFRKLDNGNIELGVHIADVSHYLQPDT 310
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
LD EA R+TSVY++ R +PMLP +LS SL P ++ FS ++L+ V D+W
Sbjct: 311 ILDQEAYDRATSVYLVDRVVPMLPEILSNGACSLRPNEEKYTFSAVFELDKNAKVKDQWF 370
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWP-QLYGQFEWSD-VVRSIKSLYEV 444
GRTV S + +YE AQ II+ N + E + G + + +V ++ L +
Sbjct: 371 GRTVTYSDARFAYEEAQHIIET-----MENKIPEDISIREEGSYTVDNAIVEAVLELDRL 425
Query: 445 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 504
+K ++ R +GA+ + + F DE P +D N L EEFMLLANK AE
Sbjct: 426 AKKMRSVRMREGAISFDKVEVKFHLDEENEPIGVFFKTSKDANKLIEEFMLLANKKVAEF 485
Query: 505 IARAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL--KD 561
I + P + R H PN KL + + G L+ S SL + + K
Sbjct: 486 IGKQKPKKTFVYRCHDEPNEEKLASLQTVVGRFGHSLNLSDRKSVTSSLNSLLKNVQGKK 545
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+ L D L A R M A Y + GHY LAF YTHFTSP+RRYPD++VHR
Sbjct: 546 EQNLVDTL---AIRTMSKAYYGTE-------NIGHYGLAFEYYTHFTSPIRRYPDVMVHR 595
Query: 622 TLNAALEA 629
L L+
Sbjct: 596 LLQQYLDG 603
>gi|323351181|ref|ZP_08086837.1| ribonuclease R [Streptococcus sanguinis VMC66]
gi|322122405|gb|EFX94116.1| ribonuclease R [Streptococcus sanguinis VMC66]
Length = 782
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 153/440 (34%), Positives = 239/440 (54%), Gaps = 30/440 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
+P + +L R DLR+ FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RIPDAPTESDLKERLDLRDEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G D E + ++ +V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--DQEKAE-------------QFKAIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++ +IL++ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILENMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 ENFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMESVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TLNAALEAEKLYWKHRRMLP 641
+ +++++ +++P
Sbjct: 573 MVRDYGKSKEIAEHFEQVIP 592
>gi|339640975|ref|ZP_08662419.1| ribonuclease R [Streptococcus sp. oral taxon 056 str. F0418]
gi|339454244|gb|EGP66859.1| ribonuclease R [Streptococcus sp. oral taxon 056 str. F0418]
Length = 782
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 241/451 (53%), Gaps = 30/451 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSDFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTERDLAGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G D E + ++ +V SI S+
Sbjct: 358 KHSITQTVIKTTFRMTYSDVNDIIAG--DQEKAE-------------QFKAIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
+ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 RLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S Q+L++ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQEIMEAVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TLNAALEAEKLYWKHRRMLPKNNHREGVRGR 652
+ +++++ +++P+ + R R
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPEIASQSSSRER 603
>gi|178847337|pdb|2VNU|D Chain D, Crystal Structure Of Sc Rrp44
Length = 760
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 162/447 (36%), Positives = 227/447 (50%), Gaps = 39/447 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV-- 264
+ ID W +P H + G + + A+L E+ + FS + L CLP
Sbjct: 208 IVISIDSWPTTHKYPLGHFVRDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLPAEGH 267
Query: 265 PWEVP----------QEELLS-RKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGV 313
W+ P ++ LL+ RKDLR+ I +IDP D++DAL ++L +G VGV
Sbjct: 268 DWKAPTKLDDPEAVSKDPLLTKRKDLRDKLICSIDPPGCVDINDALHAKKLPNGNWEVGV 327
Query: 314 HIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFW 373
HIADV++FV PGTALD E R TSVY++ ++I LP LL ++ SL P VDR AFS+ W
Sbjct: 328 HIADVTHFVKPGTALDAEGAARGTSVYLVDKRIDXLPXLLGTDLCSLKPYVDRFAFSVIW 387
Query: 374 DLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSD 433
+L+ + ++V+ ++VIRS SYE AQ ID K ++ L G
Sbjct: 388 ELDDSANIVNVNFXKSVIRSREAFSYEQAQLRIDDK---TQNDELTXG------------ 432
Query: 434 VVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLNFLFEE 492
++L ++S LK KR GAL L + + V E P + + N L EE
Sbjct: 433 ----XRALLKLSVKLKQKRLEAGALNLASPEVKVHXDSETSDPNEVEIKKLLATNSLVEE 488
Query: 493 FMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF-EAFCSKHGLQLDTSSSGQFHQS 551
F LLAN + A I AFP +A LRRH AP E ++ + SS S
Sbjct: 489 FXLLANISVARKIYDAFPQTAXLRRHAAPPSTNFEILNEXLNTRKNXSISLESSKALADS 548
Query: 552 LEQAREKLKDDYVLFDILINY-ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSP 610
L++ + +D Y F+ L+ +TR A YF SG + D+ HY LA +YTHFTSP
Sbjct: 549 LDRCVDP-EDPY--FNTLVRIXSTRCXXAAQYFYSGAYS-YPDFRHYGLAVDIYTHFTSP 604
Query: 611 LRRYPDLVVHRTLNAALEAEKLYWKHR 637
+RRY D+V HR L A+ E L HR
Sbjct: 605 IRRYCDVVAHRQLAGAIGYEPLSLTHR 631
>gi|159131262|gb|EDP56375.1| cell wall biogenesis protein phosphatase Ssd1, putative [Aspergillus
fumigatus A1163]
Length = 1378
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 190/677 (28%), Positives = 302/677 (44%), Gaps = 99/677 (14%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G +V++IER + G +G L +Q K + + A++ S+ DR+ +
Sbjct: 594 GHIVAVIERIAGQMFSGTLGLLRPSSQATKEKQEAERQAREGGSARQQHDRQQEKPKIVW 653
Query: 170 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P D ++K E + + A I W S P ++
Sbjct: 654 FKPTDKRVPLIAIPTEQAPRDFVEKHQEYAN-----RIFVACIKRWPITSLHPFGTLVEQ 708
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIF 285
G G+++ + +A+L +N FS L + W V E L SR+D R+ F
Sbjct: 709 LGEMGDLKVETDALLRDNNFGADEFSDAVLKSIGWEDWSVSSEGDALLESRRDFRSETTF 768
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
TIDPS A +LD+A I+ L+DG +G+H++D+++FV + +D EA+ R T+VY++ R
Sbjct: 769 TIDPSGAIELDNAYHIKPLADGKVEIGIHVSDIAHFVKANSLVDREAKKRGTAVYLMDRL 828
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRTVIRSCCKLSYEHAQ 403
+ MLP +S E+ SL P DRL S+ + N VD WIG+++I+S +LSY+
Sbjct: 829 VNMLPRRVSTELCSLLPEQDRLTVSVVFTANPETGAVDDDVWIGKSIIKSAGRLSYDEVN 888
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+I G+ +V + I++L +++ ++ RF + R+ N
Sbjct: 889 SVIKGETNVSVAGI----------------SANIIQTLNTITRKFREARFGN---RVSNP 929
Query: 464 KPVFL---FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
P+ L D+ P + + D L EE AN A + A PD A LRR P+
Sbjct: 930 PPLRLLYQLDDENVPVERNIFDSTDARELVEELRHKANFFVARKLVSAMPDKAFLRRQPS 989
Query: 521 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLA 580
PN R+L F ++ G D SSSG SL K++DD L + + MQ A
Sbjct: 990 PNSRRLHSFIDRMNRLGYDFDPSSSGTLQSSL----CKVQDDD-LRKGMETVLLKAMQRA 1044
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRML 640
Y+ + +D+ HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1045 KYYVASTVQDEQRH-HYTLNLPVYTHFTNPSRRYADIIVHRQLEAVLS------------ 1091
Query: 641 PKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKL 700
G D ESL AD+ CN +K
Sbjct: 1092 --------------NGAIDFSDDVESLSK--------------TADL-------CNTKKD 1116
Query: 701 ACRNVKDACVKLYMWILLKKKEV-----LLSEARVLALGPRFMTIYIEKLAIERRIYYDE 755
+ N ++ V + + KK L+SE VL + + I + E+R++ D+
Sbjct: 1117 SAHNAQEQSVHIQACRSMDKKRQEIGGDLISEGIVLCVYESAFDVLIPEFGFEKRVHCDQ 1176
Query: 756 VEGLIVEWLETTSTLVL 772
+ E+ + T L L
Sbjct: 1177 LPLKKAEYRKETRVLEL 1193
>gi|255728591|ref|XP_002549221.1| exosome complex exonuclease RRP44 [Candida tropicalis MYA-3404]
gi|240133537|gb|EER33093.1| exosome complex exonuclease RRP44 [Candida tropicalis MYA-3404]
Length = 989
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 171/498 (34%), Positives = 251/498 (50%), Gaps = 55/498 (11%)
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
PK PK+ + + + + +R + +D W S +P H + G
Sbjct: 422 PKLPKIRIRTRKAKEYLGQR------------IVVVVDSWPINSRYPNGHFVRALGAIES 469
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQE-------ELLSRKDLRNFCIF 285
E + A+L E+ + FS L CLP W VPQ+ +L R DLR+ +
Sbjct: 470 AEAETEALLLEHDVEYRPFSKNVLDCLPKEGDNWVVPQDLENTDDVQLQKRVDLRDKLVC 529
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
+IDP D+DDAL ++L +G VGVHIADV++FV P T+LD E R TSVY++ ++
Sbjct: 530 SIDPPNCVDIDDALHAKQLPNGNYEVGVHIADVTHFVKPNTSLDQEGASRGTSVYLVDKR 589
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 405
I MLP LL + SL P V+R AFS+ W+++ ++V+ +++I+S SYE AQ
Sbjct: 590 IDMLPQLLGTNLCSLKPFVERFAFSVIWEVDEDANIVNVNYMKSIIKSRQAFSYEQAQMR 649
Query: 406 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK- 464
ID P + ++ S++ L ++SK LK KR GAL L + +
Sbjct: 650 IDD--------------PN-----QQDELTNSMRILLKLSKKLKQKRLDAGALNLASPEV 690
Query: 465 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAP 521
V + E P + + + N L EEFML AN + A I A+P +A+LRRH PA
Sbjct: 691 KVHMDSETSDPQEVEIKKLLETNSLVEEFMLFANISVARKIYDAYPQTAMLRRHAPPPAT 750
Query: 522 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLA 580
N L + K+G+ + SS SL++ + KD Y F+ L+ +TR M A
Sbjct: 751 NFETLNDM-LNVRKNGMSISLESSKALADSLDRCVDS-KDPY--FNTLVRIMSTRCMMAA 806
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR--- 637
YF SG + ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 807 EYFPSGSY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYETLDLSHRDKS 865
Query: 638 --RMLPKNNHREGVRGRF 653
M+ KN +R +F
Sbjct: 866 KMEMIVKNINRRHRNAQF 883
>gi|70995504|ref|XP_752507.1| cell wall biogenesis protein phosphatase Ssd1 [Aspergillus fumigatus
Af293]
gi|66850142|gb|EAL90469.1| cell wall biogenesis protein phosphatase Ssd1, putative [Aspergillus
fumigatus Af293]
Length = 1378
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 190/677 (28%), Positives = 302/677 (44%), Gaps = 99/677 (14%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G +V++IER + G +G L +Q K + + A++ S+ DR+ +
Sbjct: 594 GHIVAVIERIAGQMFSGTLGLLRPSSQATKEKQEAERQAREGGSARQQHDRQQEKPKIVW 653
Query: 170 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P D ++K E + + A I W S P ++
Sbjct: 654 FKPTDKRVPLIAIPTEQAPRDFVEKHQEYAN-----RIFVACIKRWPITSLHPFGTLVEQ 708
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIF 285
G G+++ + +A+L +N FS L + W V E L SR+D R+ F
Sbjct: 709 LGEMGDLKVETDALLRDNNFGADEFSDAVLKSIGWEDWSVSSEGDALLESRRDFRSETTF 768
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
TIDPS A +LD+A I+ L+DG +G+H++D+++FV + +D EA+ R T+VY++ R
Sbjct: 769 TIDPSGAIELDNAYHIKPLADGKVEIGIHVSDIAHFVKANSLVDREAKKRGTAVYLMDRL 828
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRTVIRSCCKLSYEHAQ 403
+ MLP +S E+ SL P DRL S+ + N VD WIG+++I+S +LSY+
Sbjct: 829 VNMLPRRVSTELCSLLPEQDRLTVSVVFTANPETGAVDDDVWIGKSIIKSAGRLSYDEVN 888
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+I G+ +V + I++L +++ ++ RF + R+ N
Sbjct: 889 SVIKGETNVSVAGI----------------SANIIQTLNTITRKFREARFGN---RVSNP 929
Query: 464 KPVFL---FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
P+ L D+ P + + D L EE AN A + A PD A LRR P+
Sbjct: 930 PPLRLLYQLDDENVPVERNIFDSTDARELVEELRHKANFFVARKLVSAMPDKAFLRRQPS 989
Query: 521 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLA 580
PN R+L F ++ G D SSSG SL K++DD L + + MQ A
Sbjct: 990 PNSRRLHSFIDRMNRLGYDFDPSSSGTLQSSL----CKVQDDD-LRKGMETVLLKAMQRA 1044
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRML 640
Y+ + +D+ HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1045 KYYVASTVQDEQRH-HYTLNLPVYTHFTNPSRRYADIIVHRQLEAVLS------------ 1091
Query: 641 PKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKL 700
G D ESL AD+ CN +K
Sbjct: 1092 --------------NGAIDFSDDVESLSK--------------TADL-------CNTKKD 1116
Query: 701 ACRNVKDACVKLYMWILLKKKEV-----LLSEARVLALGPRFMTIYIEKLAIERRIYYDE 755
+ N ++ V + + KK L+SE VL + + I + E+R++ D+
Sbjct: 1117 SAHNAQEQSVHIQACRSMDKKRQEIGGDLISEGIVLCVYESAFDVLIPEFGFEKRVHCDQ 1176
Query: 756 VEGLIVEWLETTSTLVL 772
+ E+ + T L L
Sbjct: 1177 LPLKKAEYRKETRVLEL 1193
>gi|422823160|ref|ZP_16871348.1| ribonuclease R [Streptococcus sanguinis SK405]
gi|324993810|gb|EGC25729.1| ribonuclease R [Streptococcus sanguinis SK405]
Length = 782
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 153/441 (34%), Positives = 238/441 (53%), Gaps = 30/441 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLEGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G V+
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVI 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G D E + ++ +V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--DQEKAE-------------QFKAIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TLNAALEAEKLYWKHRRMLPK 642
+ +++++ +++P+
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPE 593
>gi|344302216|gb|EGW32521.1| hypothetical protein SPAPADRAFT_138689 [Spathaspora passalidarum
NRRL Y-27907]
Length = 987
Score = 233 bits (594), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 170/492 (34%), Positives = 245/492 (49%), Gaps = 43/492 (8%)
Query: 180 MVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQI 239
V+L+ L ++ R + + +V +D W S +P H + G E +
Sbjct: 415 FVILMDKLLPKVRIRTRKAKEYLGQRIVIV-VDSWPSNSRYPNGHFVRTLGEIESAEAET 473
Query: 240 NAILYENAICCSGFSPESLSCLPCV--PWEVPQ------EELLSRKDLRNFCIFTIDPST 291
A+L E+ + FS L CLP W VP +L R DLR+ + +IDP
Sbjct: 474 EALLLEHDVEYRPFSKNVLDCLPKEGDNWVVPDMTDPQDPQLKKRVDLRDRLVCSIDPPG 533
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
D+DDAL L +G VGVHIADV++FV P TALD E R TSVY++ ++I MLP+
Sbjct: 534 CVDIDDALHARVLPNGNYEVGVHIADVTHFVKPNTALDQEGASRGTSVYLVDKRIDMLPM 593
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
LL + SL P VDR AFS+ W+L+ +++ ++VI+S SYE AQ ID
Sbjct: 594 LLGTNLCSLKPFVDRFAFSVIWELDENANILKVDYMKSVIKSRQAFSYEQAQLRIDDPTQ 653
Query: 412 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFD 470
+ ++ S++ L ++SK LK R GAL L + + V +
Sbjct: 654 TD-------------------ELTNSMRVLLKLSKKLKQGRMDAGALNLASPEVKVHMDS 694
Query: 471 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRH---PAPNMRKLR 527
E P + + + N L EEFML AN + A I ++P +A+LRRH PA N L
Sbjct: 695 ETSDPQEVEIKKLLETNSLVEEFMLFANISVARKIYDSYPQTAMLRRHAPPPATNFETLN 754
Query: 528 EFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSG 586
+ K+G+ + SS SL++ + D Y F+ LI +TR M A YF SG
Sbjct: 755 DM-LNVRKNGMSISLESSKALADSLDRIVDP-NDPY--FNTLIRIMSTRCMMAAEYFPSG 810
Query: 587 DFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR-----RMLP 641
+ ++ HY LA +YTHFTSP+RRY D+VVHR L A+ E L HR M+
Sbjct: 811 SY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVVHRQLAGAIGYENLDLSHRDKQRMEMIV 869
Query: 642 KNNHREGVRGRF 653
KN ++ +F
Sbjct: 870 KNINKRHRNAQF 881
>gi|422826751|ref|ZP_16874930.1| ribonuclease R [Streptococcus sanguinis SK678]
gi|324994869|gb|EGC26782.1| ribonuclease R [Streptococcus sanguinis SK678]
Length = 782
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 154/441 (34%), Positives = 237/441 (53%), Gaps = 30/441 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPEAPTESDLAGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G + QF+ +V SI S+
Sbjct: 358 KNTITQTVIKTTFRMTYSDVNDIIAGN-------------QEKAEQFKA--IVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TLNAALEAEKLYWKHRRMLPK 642
+ +++++ +++P+
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPE 593
>gi|422882685|ref|ZP_16929141.1| ribonuclease R [Streptococcus sanguinis SK355]
gi|332358718|gb|EGJ36541.1| ribonuclease R [Streptococcus sanguinis SK355]
Length = 782
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 153/440 (34%), Positives = 238/440 (54%), Gaps = 30/440 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR+ FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDTPTESDLERRLDLRDEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S+ ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSVIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G D E + ++ +V SI +
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--DQEKAE-------------QFKAIVPSIDCMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TLNAALEAEKLYWKHRRMLP 641
+ +++++ +++P
Sbjct: 573 MVRDYGKSKEIAEHFEQVIP 592
>gi|422875979|ref|ZP_16922449.1| ribonuclease R [Streptococcus sanguinis SK1056]
gi|332362415|gb|EGJ40215.1| ribonuclease R [Streptococcus sanguinis SK1056]
Length = 782
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 228/422 (54%), Gaps = 30/422 (7%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLAGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G D E + ++ +V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--DEEKAE-------------QFKAIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGVRIYGTASSMSQQALQDIMEAVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TL 623
+
Sbjct: 573 MV 574
>gi|422865059|ref|ZP_16911684.1| ribonuclease R [Streptococcus sanguinis SK1058]
gi|327490243|gb|EGF22031.1| ribonuclease R [Streptococcus sanguinis SK1058]
Length = 782
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 158/454 (34%), Positives = 243/454 (53%), Gaps = 36/454 (7%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPEAPTESDLAGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G E Q + ++V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAGN---------QEKAEQ------FKEIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILEIMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S QSL+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQSLQDIMEAVKD 520
Query: 562 ---DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
+ VL +L+ R MQ A Y + + GHY LA YTHFTSP+RRYPDL+
Sbjct: 521 QPYEEVLSMMLL----RSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLL 569
Query: 619 VHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGR 652
VHR + +++++ +++P+ + R R
Sbjct: 570 VHRMVRDYGKSKEIAEHFEQVIPEIASQSSSRER 603
>gi|392390324|ref|YP_006426927.1| ribonuclease R [Ornithobacterium rhinotracheale DSM 15997]
gi|390521402|gb|AFL97133.1| ribonuclease R [Ornithobacterium rhinotracheale DSM 15997]
Length = 716
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 247/513 (48%), Gaps = 55/513 (10%)
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
KY ++V K +P I E + + V + W E++ P + V G+ G
Sbjct: 164 KYGFVIVEGKSMPVDIYVPKENLNHAQNGDKVVCNVVSWPEDADSPFGEITRVLGKPGVH 223
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDL 295
+ +I++IL E + + F E + E+ EE+ R+D+R+ FTIDP A D
Sbjct: 224 DVEIHSILAEYGLPAA-FPKEVEDEAQNLDTEIKLEEIAKRRDMRDVPTFTIDPKDAKDF 282
Query: 296 DDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSE 355
DDALS L +G VGVHIADVSY+V PGT LD EA R TSVY++ R +PMLP +LS
Sbjct: 283 DDALSFRILENGNYEVGVHIADVSYYVKPGTLLDEEAYKRGTSVYLVDRVVPMLPEVLSN 342
Query: 356 EVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESS 415
SL P D+ FS ++++ +++ W GRTV S + +YE AQ II+G
Sbjct: 343 FACSLRPNEDKYTFSAVFEMDKNANIIKSWFGRTVTHSDKRYAYEDAQAIIEGGEGELKE 402
Query: 416 NTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTP 475
L L +++KIL+ +R +GA+ + + F DE G P
Sbjct: 403 EIL---------------------ILDKLAKILRKERLKNGAISFDRLEVKFNLDEDGNP 441
Query: 476 YDSVLSGREDLNFLFEEFMLLANKTAAEVIA--RAFPD--SALLRRHPAPNMRKLREFEA 531
+D N L EEFMLLAN+ +E ++ R P + + R H P+ KL +
Sbjct: 442 LGVYFKESKDANKLIEEFMLLANRKVSEFVSLKRGKPTDRTFVYRIHDDPDPEKLASLKQ 501
Query: 532 FCSKHGLQLD----TSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGD 587
F + G +L+ ++ +Q L + K ++ +++ A R M A Y
Sbjct: 502 FIHQFGYKLELGDRKKTTASINQLLHDVKGKGEE-----NMIETLAMRSMSKAIYSTD-- 554
Query: 588 FKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALE----AEKLYWK-------H 636
+ GHY LAF Y+HFTSP+RRYPD++ HR L L+ AEK ++
Sbjct: 555 -----NIGHYGLAFEYYSHFTSPIRRYPDVMAHRLLQRYLDGGKSAEKEVYEEKCEHCSQ 609
Query: 637 RRMLPKNNHREGVRGRFLTGIFYDKDAAESLEG 669
R L + R+ + +++ F DK E G
Sbjct: 610 RERLAADAERDSI--KYMQVKFMDKHVGEEFSG 640
>gi|430812952|emb|CCJ29669.1| unnamed protein product [Pneumocystis jirovecii]
Length = 992
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 262/526 (49%), Gaps = 64/526 (12%)
Query: 116 PTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHP 175
PT +VV II+R+ W Y G + + S+ + ++ +Q T
Sbjct: 373 PTAKVVGIIKRN--------------WKTYVG------QIDPESVVISNKTRVQQTVF-- 410
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ + K +P I+ + +G + +++ ID W +S +P H +H G+
Sbjct: 411 ----FISVDKRIP-KIRIKTRQGPILLNQKILV-NIDTWERDSRYPSGHFVHALGKIDVD 464
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQ----EELLSRKDLRNFCIFTIDP 289
+ + A+L + I S F L CLP WE+ RKDLR+ I +IDP
Sbjct: 465 DTETEALLIQYDIEYSPFPKCVLDCLPPEGDKWEISSAMSSNNWEKRKDLRHLPICSIDP 524
Query: 290 STATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
D+DDAL + L++ VGVH+ADVS+FV P T++D EA R T+VY+L ++I ML
Sbjct: 525 PGCVDIDDALHVRVLANKNFEVGVHVADVSHFVNPNTSIDAEASKRGTTVYLLDKRIDML 584
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGK 409
P LL + SL PG +RLAFSI +++ +++ +++I+S +YE+AQ ID K
Sbjct: 585 PGLLGTNLCSLKPGFERLAFSIIFEITPEIEIIKTEFMKSIIKSRSAFTYENAQLQIDNK 644
Query: 410 FDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLF 469
F+ ++ S++ L +SK L+ KR+ +GAL L S P
Sbjct: 645 -------------------FQNDELTSSMRILLMLSKKLRQKRYDNGALNL--SSPEVRL 683
Query: 470 DEYGTPYDSVLSGREDL---NFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
+ D + + L N L EEFMLLAN A I +PD A+LRRH AP
Sbjct: 684 EIGNETSDKITLESKKLYETNTLVEEFMLLANIAVARKIYEVYPDFAILRRHAAPPKENF 743
Query: 527 REFEAFCS-KHGLQLDTSSSGQFHQSLEQAREKLKDDY-VLFDILINYATRPMQLASYFC 584
+ + + L+ +SS SL + ++ + + L I++ TR M A YF
Sbjct: 744 ETLQNVLKIRRNMILNINSSKDLADSLNKCIDQNEPYFNTLLRIMV---TRCMLSAEYFF 800
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
+G+ + +++ HY LA +YTH+TSP+RRY D++ HR L AA+ E
Sbjct: 801 AGNC-NYSEFKHYGLAVDIYTHWTSPIRRYADIMTHRQLAAAIGYE 845
>gi|242768414|ref|XP_002341564.1| cell wall biogenesis protein phosphatase Ssd1, putative [Talaromyces
stipitatus ATCC 10500]
gi|218724760|gb|EED24177.1| cell wall biogenesis protein phosphatase Ssd1, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1338
Score = 232 bits (592), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 188/676 (27%), Positives = 307/676 (45%), Gaps = 96/676 (14%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G +V++IER + G +G L + + + A ++ DR+ +
Sbjct: 554 AGHIVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERAARDGGHGRQQDRQQDKPKIVW 613
Query: 170 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P D ++K + + + A I W S P ++
Sbjct: 614 FKPTDKRVPLIAIPTEQAPRDFVEKHQDYAN-----RIFVACIKRWPITSLHPFGTLVEQ 668
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQE--ELLS-RKDLRNFCIF 285
G G+++ + +A+L +N FS L + W V E LLS R+D R+ F
Sbjct: 669 LGEMGDLKVETDALLRDNNFAADEFSEAVLKNVGWEDWTVASEGDSLLSNRRDFRDETTF 728
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
TIDPS + +LDDA+ I++L+DG VG+H+ADV++FV + +D EA+ R T VY++ R
Sbjct: 729 TIDPSGSKELDDAIHIKKLADGKVEVGIHVADVAHFVKANSLVDREAKKRGTGVYLMNRV 788
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRTVIRSCCKLSYEHAQ 403
+ MLP LS E+ SL PG +RL S+ + +++A VD WIG++VI+S KL+Y+
Sbjct: 789 VNMLPPRLSTEICSLLPGQERLTVSVVFKVDTATGAVDDDVWIGKSVIKSSGKLTYDDVN 848
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS--IKSLYEVSKILKDKRFTDGALRLE 461
I G ES + L D V + I+ L ++ K+ RF + A +
Sbjct: 849 AAITG----ESGSPL--------------DGVNADDIRLLEAITTKFKEARFGNRATDIP 890
Query: 462 NSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAP 521
+ ++ D+ P + + + + EE AN A + A P+ A LRR P
Sbjct: 891 ALRLIYQLDDENIPVELNIFDSSPAHEVIEELSYKANFFVARKLFAAMPEKAFLRRQAVP 950
Query: 522 NMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLAS 581
N R+L+ F ++ G ++D SSSG SL + + D L + + MQ A
Sbjct: 951 NPRRLQTFVDRMNRLGYEIDPSSSGSLQASLFKVK-----DADLRKGMETVLIKAMQRAK 1005
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLP 641
Y+ +G+ + HYAL P+Y HFTSP RRY D++VHR L A
Sbjct: 1006 YYVAGNVT-EAQRQHYALNLPLYAHFTSPTRRYADVIVHRQLEA---------------- 1048
Query: 642 KNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLA 701
LS A+++ D LV A CN++K +
Sbjct: 1049 ------------------------------VLSNGAIEF-TDDVDTLVKTAEQCNNKKDS 1077
Query: 702 CRNVKDACVKLYMWILLKKK--EV---LLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
N ++ V + ++ KK EV L+SE VL + + + + E+R++ D++
Sbjct: 1078 AHNAQEQSVHIESCRVMDKKRSEVGGDLISEGIVLCVYESAFDVLLPEFGFEKRVHCDQL 1137
Query: 757 EGLIVEWLETTSTLVL 772
E+ + T L L
Sbjct: 1138 PLKKAEYRKDTRVLEL 1153
>gi|422854675|ref|ZP_16901339.1| ribonuclease R [Streptococcus sanguinis SK160]
gi|325696170|gb|EGD38061.1| ribonuclease R [Streptococcus sanguinis SK160]
Length = 782
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 154/422 (36%), Positives = 226/422 (53%), Gaps = 30/422 (7%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR IFTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLEGRLDLREEVIFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G E Q + +V SI S+
Sbjct: 358 KHTITQTVIKTIFRMTYSDVNDIIAGN---------QEKAEQ------FKAIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
+ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 RLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASTFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TL 623
+
Sbjct: 573 MV 574
>gi|294507542|ref|YP_003571600.1| ribonuclease R [Salinibacter ruber M8]
gi|294343870|emb|CBH24648.1| ribonuclease R [Salinibacter ruber M8]
Length = 666
Score = 232 bits (591), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 229/437 (52%), Gaps = 50/437 (11%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLPC 263
E V ID +++ P+ +L V G + P + + L + + F E +
Sbjct: 133 EKVMVSIDRFDDRKASPEGRILRVIGPSDD--PNVRVLSLAMSMDVKADFPDEVEAEAES 190
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
+P ++P++E+ R+DLR+ +FTIDP A D DDA+ +E L +G VGVHIADVS++V
Sbjct: 191 IPVKIPEDEIERRRDLRDKPVFTIDPVDAKDFDDAIHVEELDNGNYEVGVHIADVSHYVE 250
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
P TA+D EA R TSVY++ R IPMLP LS +V SL P D+LAFSI +L + GDVVD
Sbjct: 251 PDTAIDAEALERGTSVYLVDRTIPMLPEKLSNKVCSLRPHEDKLAFSILMELTTEGDVVD 310
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I TVI S +L+Y+ AQD I+G G+P +DVV++ +
Sbjct: 311 YEICETVIHSKERLTYDRAQDYIEG------------GYPD---DKMAADVVQANR---- 351
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
++K + +R +GA+ + + + D+ GTP + V R N L EEFMLLAN+T A+
Sbjct: 352 LAKTITRRRMQEGAIDFGSDEVNVILDDDGTPTNIVRKERLQANRLIEEFMLLANRTVAK 411
Query: 504 VIARA------------FPDSALLRRHPAPNMRKLREFEAFCS--KHGLQLD--TSSSGQ 547
IA P + R H +P+ ++++ + H L L + S
Sbjct: 412 HIAAPEHVDRHRSNGTDEPLPFVYRVHDSPDSEEIQQLAEYVRVFDHELPLTDGNARSSD 471
Query: 548 FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 607
+++ + + ++ +++ A R M A Y + GHY L F Y+HF
Sbjct: 472 LGALIDEVQGQPEE-----QVIVRAALRAMSKAEYAVG-------NIGHYGLGFDYYSHF 519
Query: 608 TSPLRRYPDLVVHRTLN 624
TSP+RRYPDL+VHR L
Sbjct: 520 TSPIRRYPDLMVHRLLK 536
>gi|83815922|ref|YP_445650.1| ribonuclease R [Salinibacter ruber DSM 13855]
gi|83757316|gb|ABC45429.1| ribonuclease R [Salinibacter ruber DSM 13855]
Length = 666
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/437 (34%), Positives = 229/437 (52%), Gaps = 50/437 (11%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLPC 263
E V ID +++ P+ +L V G + P + + L + + F E +
Sbjct: 133 EKVMVSIDRFDDRKASPEGRILRVIGPSDD--PNVRVLSLAMSMDVKADFPDEVEAEAES 190
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
+P ++P++E+ R+DLR+ +FTIDP A D DDA+ +E L +G VGVHIADVS++V
Sbjct: 191 IPVKIPEDEIERRRDLRDKPVFTIDPVDAKDFDDAVHVEELDNGNYEVGVHIADVSHYVE 250
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
P TA+D EA R TSVY++ R IPMLP LS +V SL P D+LAFSI +L + GDVVD
Sbjct: 251 PDTAIDAEALERGTSVYLVDRTIPMLPEKLSNKVCSLRPHEDKLAFSILMELTTEGDVVD 310
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I TVI S +L+Y+ AQD I+G G+P +DVV++ +
Sbjct: 311 YEICETVIHSKERLTYDRAQDYIEG------------GYPD---DKMAADVVQANR---- 351
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
++K + +R +GA+ + + + D+ GTP + V R N L EEFMLLAN+T A+
Sbjct: 352 LAKTITRRRMQEGAIDFGSDEVNVILDDDGTPTNIVRKERLQANRLIEEFMLLANRTVAK 411
Query: 504 VIARA------------FPDSALLRRHPAPNMRKLREFEAFCS--KHGLQLD--TSSSGQ 547
IA P + R H +P+ ++++ + H L L + S
Sbjct: 412 HIAAPEHVDRHRSNGTDEPLPFVYRVHDSPDSEEIQQLAEYVRVFDHELPLTDGNARSSD 471
Query: 548 FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 607
+++ + + ++ +++ A R M A Y + GHY L F Y+HF
Sbjct: 472 LGALIDEVQGQPEE-----QVIVRAALRAMSKAEYAVG-------NIGHYGLGFDYYSHF 519
Query: 608 TSPLRRYPDLVVHRTLN 624
TSP+RRYPDL+VHR L
Sbjct: 520 TSPIRRYPDLMVHRLLK 536
>gi|385809169|ref|YP_005845565.1| exoribonuclease R [Ignavibacterium album JCM 16511]
gi|383801217|gb|AFH48297.1| Exoribonuclease R [Ignavibacterium album JCM 16511]
Length = 698
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/426 (35%), Positives = 215/426 (50%), Gaps = 42/426 (9%)
Query: 214 WNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEEL 273
W + P ++ V G+ G ++ +I +I E + F ++ + +E+ +L
Sbjct: 183 WESPTQNPIGEIIEVLGKPGSLDTEITSIAKEFGLKYR-FPANVVNESEEIVFEITTNDL 241
Query: 274 LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 333
R D R + TIDP A D DDALSIE+ G VG+HIADVS++V + LD EAQ
Sbjct: 242 KQRIDFRQKNVITIDPEDAKDFDDALSIEKNEKGNFIVGIHIADVSHYVDYDSYLDQEAQ 301
Query: 334 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 393
R SVY++ R IPMLP LS + SL P DRL +S+ ++ G +VD I +TVI S
Sbjct: 302 QRGNSVYLVGRVIPMLPENLSNNICSLVPNEDRLTYSVIVEMTPRGRIVDYQIKKTVINS 361
Query: 394 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 453
+ +Y+ Q II+ GEG D I +L ++KIL+ KR
Sbjct: 362 KRRFNYDEVQKIIET----------GEG-----------DFAEDILNLDTLAKILRRKRM 400
Query: 454 TDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA---RAFP 510
+G+ + F DEYG P ++ + +D N L EEFMLLANK A+ IA R
Sbjct: 401 KEGSFDFNTLEVKFKLDEYGIPLEAYIKSMKDSNMLVEEFMLLANKIVAQHIALPKRGEA 460
Query: 511 DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTS---SSGQFHQSLEQAREKLKDDYVLFD 567
+ R H P+ K+ EF F G Q+ + + +F + L+Q + K ++
Sbjct: 461 KPFVYRVHDLPDQEKIMEFVRFVKSLGYQVSQNLIKKTSEFQKLLDQVKGKEEEP----- 515
Query: 568 ILIN-YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAA 626
LIN A R M A Y T+ GHY L F YTHFTSP+RRY DL+VHR L
Sbjct: 516 -LINELAIRSMAKAFY-------SPTNIGHYGLGFKYYTHFTSPIRRYSDLLVHRLLFKY 567
Query: 627 LEAEKL 632
+E +L
Sbjct: 568 IENPQL 573
>gi|384499543|gb|EIE90034.1| hypothetical protein RO3G_14745 [Rhizopus delemar RA 99-880]
Length = 1114
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/459 (32%), Positives = 247/459 (53%), Gaps = 40/459 (8%)
Query: 176 KYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEV 235
+ P + + ++ +P K +E DA L I W S P + + G +
Sbjct: 449 RVPLIAIPIEQVP---KDFVENSDAYAN-RLFVGSIKRWPITSLHPFGTLENELGPITHL 504
Query: 236 EPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDL---RNFCIFTIDPSTA 292
+ Q+ AIL + I + F+ + C+P P+ + +R+DL + + TIDPS +
Sbjct: 505 DVQVKAILADANISDTPFTEAVMECVPPTPFRFEPSDEENRRDLTLENHNRMITIDPSGS 564
Query: 293 TDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVL 352
T +D L+I RL D VGVH+ D+SYF+ P + LD EA+ R V + +++PM+PV
Sbjct: 565 TIFEDGLTIVRLGDDTFEVGVHVCDISYFIKPHSPLDKEARARGVHVRLDCKEVPMIPVE 624
Query: 353 LSEEVGSLNPGVD--RLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 410
L + + N V+ + A SI W L+ G ++D W+G+T +RS +LSY+ + I+DG
Sbjct: 625 L---INAANFTVNEPKPAMSIIWKLSKDGMLLDTWLGKTTVRSVAQLSYDDVEKIMDG-- 679
Query: 411 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 470
S + GE ++ + I L+ ++ L RFT+ A+ L SK + FD
Sbjct: 680 ----SESRGE------------EIDKDIYLLHLLATELHKHRFTEQAMSL--SKQILSFD 721
Query: 471 EYGTPYDSVLSGRE-DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREF 529
+ P +S + ++ + +EF+ LAN+ A+ I+ +P+ ALLRR PN RK+ E
Sbjct: 722 DPMKPSKVNISYKNPEIASIVKEFLFLANQAVAQKISSQYPEQALLRRQSPPNNRKINEL 781
Query: 530 EAFCSKH-GLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDF 588
+ + +KH G++LD +++ S+++ + ++ L ILI + M+ YFC+G F
Sbjct: 782 QEYAAKHLGIELDITNATTLQSSVQKI--ETQELRQLVSILI---LKTMEPPKYFCAGAF 836
Query: 589 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
D + H++L P++THFT+PLRRY D++VHR L AAL
Sbjct: 837 -DILKYSHFSLGTPLFTHFTAPLRRYVDIIVHRQLEAAL 874
>gi|410459051|ref|ZP_11312805.1| ribonuclease R [Bacillus azotoformans LMG 9581]
gi|409930757|gb|EKN67752.1| ribonuclease R [Bacillus azotoformans LMG 9581]
Length = 784
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 262/527 (49%), Gaps = 69/527 (13%)
Query: 106 AMISSYPTK-RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPD 164
A I +P RP G +V +IER + IVG N++F +
Sbjct: 113 ARIDKHPADGRPEGAIVRVIERGVTQ--IVGTYVDNKYFGF------------------- 151
Query: 165 REYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAH 224
+ P + + + K E + +E V ++ ++ E +
Sbjct: 152 -----VIPDDKRIGSDIFIAK----------EAKNGAVEGHKVVVKLIKYPEGRMNAEGE 196
Query: 225 VLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCI 284
+ + G + I +I++++ + F P+ + P E+ +EL +R+DLR+ I
Sbjct: 197 ITEILGHKNDPGVDILSIIHKHQLPGD-FPPDVMEQAHNTPDEINPDELTNRRDLRDQTI 255
Query: 285 FTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQR 344
TID + A DLDDA+++ +L +G ++GVHIADVSY+V G+A+D EA R TS+Y++ R
Sbjct: 256 VTIDGADAKDLDDAVTVTKLDNGNYKLGVHIADVSYYVTEGSAIDKEAFNRGTSIYLVDR 315
Query: 345 KIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQD 404
IPM+P LS + SLNP VDRL S ++NS G+VV I ++VI++ +++Y
Sbjct: 316 VIPMIPHRLSNGICSLNPQVDRLTMSCEMEINSNGEVVSHEIFQSVIKTTERMTYSDVNK 375
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
IID K D E L E + L F D E+++IL+ KRF GA+ + +
Sbjct: 376 IIDDK-DPE----LLEKYKPLVPMFLLMD---------ELAEILRKKRFERGAIDFDFKE 421
Query: 465 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA-RAFPDSALLRRHPAPNM 523
L DEYG P D ++ R L E+FML+AN+T AE P + R H P
Sbjct: 422 AKVLVDEYGKPTDVIIRERSSGERLIEDFMLIANETVAEHFHWMNLP--FIYRVHEDPKE 479
Query: 524 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK---DDYVLFDILINYATRPMQLA 580
KL F F + G + +++ ++L+Q E+++ ++ V+ +++ R M+ A
Sbjct: 480 EKLSRFFEFITNFGYVVKGTANDVHPRALQQILEEVRGTPEEMVISTVML----RSMKQA 535
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
Y D GH+ L+ YTHFTSP+RRYPDL+VHR + L
Sbjct: 536 RY-------DAESLGHFGLSAEFYTHFTSPIRRYPDLIVHRLIRTYL 575
>gi|198274471|ref|ZP_03207003.1| hypothetical protein BACPLE_00619 [Bacteroides plebeius DSM 17135]
gi|198272673|gb|EDY96942.1| ribonuclease R [Bacteroides plebeius DSM 17135]
Length = 716
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/426 (34%), Positives = 222/426 (52%), Gaps = 41/426 (9%)
Query: 210 RIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEV 268
RI EW EE+ P V+ + G+ G+ +++AIL E + P+++ + + ++
Sbjct: 195 RITEWPEEAKNPFGEVIDILGKAGDNTTEMHAILAEYGLPY--VYPQAVEAAAEKLSADI 252
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
E+ R+D R+ FTIDP A D DDALSI L G+ VGVHIADVS+++ G+ +
Sbjct: 253 TPEDYAEREDFRDVVTFTIDPKDAKDFDDALSIRTLKPGLWEVGVHIADVSHYIKEGSII 312
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA R+TSVY++ R IPMLP L + SL P ++LA+S+ +++N +V + I
Sbjct: 313 DKEAAKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAYSVIFEMNEKAEVKNYRIRH 372
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
TVI+S + +YE AQ II+ GEG D + L +++IL
Sbjct: 373 TVIKSNRRFTYEEAQQIIE----------TGEG-----------DYKEEVLQLNRLAQIL 411
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA 508
++KR G++ + + F DE G P ++ N L EEFMLLANKT AE + +
Sbjct: 412 REKRMAAGSINFDRCEVKFEIDETGKPLSVYFKVSKEANKLIEEFMLLANKTVAEYVGKV 471
Query: 509 FPDSAL----LRRHPAPNMRKLREFEAFCSKHGLQLDT-SSSGQFHQSLEQAREKL--KD 561
+ R H P+ KL F ++ G ++ T S + +S+ ++ K
Sbjct: 472 PKNKKPKVLPYRIHDLPDPDKLDNLNQFIARFGYKIRTGGSKAEVSKSINHLLGEIEGKK 531
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+ L + + + R MQ A Y + GHY LAF YTHFTSP+RRYPDL+VHR
Sbjct: 532 EQNLIETV---SLRAMQKARYSI-------YNIGHYGLAFDYYTHFTSPIRRYPDLMVHR 581
Query: 622 TLNAAL 627
L L
Sbjct: 582 LLTRYL 587
>gi|386715283|ref|YP_006181606.1| ribonuclease R [Halobacillus halophilus DSM 2266]
gi|384074839|emb|CCG46332.1| ribonuclease R [Halobacillus halophilus DSM 2266]
Length = 762
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/436 (33%), Positives = 236/436 (54%), Gaps = 32/436 (7%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V I ++ EE + ++ + G + I +I++++ I GF E L P
Sbjct: 180 VIVNITKFPEERMSAEGEIVEILGHKNDPGIDIISIIHKHGIKV-GFPDEVLKQAGETPD 238
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
++ +EE+ +R+DLR+ I TID + A DLDDA+++++L +G ++GVHIADV+Y+V G+
Sbjct: 239 QISEEEIKNRRDLRDETIVTIDGADAKDLDDAVTVKKLDNGNFKLGVHIADVTYYVDEGS 298
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
+D EA+ R+TSVY++ R IPM+P LS + SLNP VDRL S ++N +GDVV+ I
Sbjct: 299 PIDKEARERATSVYLVDRVIPMIPHRLSNGICSLNPHVDRLTLSCEMEINKSGDVVEHEI 358
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
++VI++ +++Y I++ + L + + L F + + ++K
Sbjct: 359 FQSVIKTNERMTYRDVNKILE-----DEDQELIKKYENLVPMF---------RDMAALAK 404
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
L+ KR GA+ + + + DE G D L R L EEFML AN+T AE
Sbjct: 405 TLRGKRMDRGAIDFDFKEAGVIVDEEGKAVDVKLRERSVAERLIEEFMLAANETIAEHF- 463
Query: 507 RAFPDSALLRR-HPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLK---DD 562
+ D + R H P+ KL+ F F + G + ++ Q+L++ E++K +D
Sbjct: 464 -HWMDVPFIHRIHQDPDESKLQNFFEFVANLGYAVKGTADNVHPQALQKVLEEVKGTQED 522
Query: 563 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
++ +++ R MQ A Y D GH+ LA YTHFTSP+RRYPDL+VHR
Sbjct: 523 MIISKLML----RSMQQAKY-------DPQSLGHFGLATDYYTHFTSPIRRYPDLIVHRL 571
Query: 623 LNAALEAEKLYWKHRR 638
+ L +KL +K R+
Sbjct: 572 IRTYLVEDKLDYKTRK 587
>gi|422857998|ref|ZP_16904648.1| ribonuclease R [Streptococcus sanguinis SK1057]
gi|327460969|gb|EGF07302.1| ribonuclease R [Streptococcus sanguinis SK1057]
Length = 782
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/422 (36%), Positives = 228/422 (54%), Gaps = 30/422 (7%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR+ FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLAGRLDLRDEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G + E + ++ +V SI S+
Sbjct: 358 KHTITQTVIKTIFRMTYSDVNDIIAG--NQEKAE-------------QFKAIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
+ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 RLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASTFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TL 623
+
Sbjct: 573 MV 574
>gi|422878365|ref|ZP_16924831.1| ribonuclease R [Streptococcus sanguinis SK1059]
gi|422928219|ref|ZP_16961161.1| ribonuclease R [Streptococcus sanguinis ATCC 29667]
gi|422931215|ref|ZP_16964146.1| ribonuclease R [Streptococcus sanguinis SK340]
gi|332367339|gb|EGJ45074.1| ribonuclease R [Streptococcus sanguinis SK1059]
gi|339617364|gb|EGQ21990.1| ribonuclease R [Streptococcus sanguinis ATCC 29667]
gi|339620397|gb|EGQ24967.1| ribonuclease R [Streptococcus sanguinis SK340]
Length = 782
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 240/451 (53%), Gaps = 30/451 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR+ FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLEGRLDLRDEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGCVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G E Q + ++V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAGN---------QEKAEQ------FKEIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
+ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 RLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGISERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TLNAALEAEKLYWKHRRMLPKNNHREGVRGR 652
+ +++++ +++P+ + R R
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPEIASQSSSRER 603
>gi|240278803|gb|EER42309.1| exosomal 3'-5' exoribonuclease complex [Ajellomyces capsulatus
H143]
Length = 1058
Score = 231 bits (589), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 180/658 (27%), Positives = 293/658 (44%), Gaps = 110/658 (16%)
Query: 118 GRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQLTP 172
G VV++IER D K + + A+ S DR+ + P
Sbjct: 282 GHVVAVIERVAASD------------KEKQEAERQARDGGHSRHHHDRQQDKPKIVWFKP 329
Query: 173 THPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGR 231
T + P + + + P D ++K E + + A I W S P ++ G
Sbjct: 330 TDKRVPLIAIPTEQAPRDFVEKHAEYAN-----NIFVACIKRWPITSLHPFGTLVEQLGA 384
Query: 232 GGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFTID 288
G ++ + +A+L +N FS L + W V E L +R+D R FTID
Sbjct: 385 MGNLKVETDALLRDNNFASDEFSDAVLKNVGFEKWSVKDEGEALLENRRDFRGETTFTID 444
Query: 289 PSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPM 348
P+ +LDDA+ ++ L DG VG+H+ADV++F+ + +D EA+ R T VY++ R + M
Sbjct: 445 PNGYKELDDAIHVKSLPDGKVEVGIHVADVAHFIKSNSLVDREAKKRGTGVYLMNRVVNM 504
Query: 349 LPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKLSYEHAQDII 406
+P L+ E+ SL PG +RL S+ + +NSA V + WIG+ VI+S KL+Y+ I+
Sbjct: 505 IPPRLATEICSLLPGEERLTVSVIFQVNSATGSVEGEPWIGKGVIKSSGKLTYDEVDAIL 564
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPV 466
+G DVE L+G IK+L +++ K RF + + + + + +
Sbjct: 565 NGNSDVE-----------LHGA-----TANDIKTLSDIASKFKKARFGNRSSNIPSLRLL 608
Query: 467 FLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKL 526
+ D+ P + + + L EE AN A+ + A PD A LRR PN+R+L
Sbjct: 609 YQLDDENVPVEQNIFNSTPAHELIEELSHKANSFVAKKLLSAIPDKAFLRRQAPPNVRRL 668
Query: 527 REFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYAT---RPMQLASYF 583
+ F ++ G +D +SSG SL K++D DI T + MQ A Y+
Sbjct: 669 QTFVDRMTRLGYDIDPTSSGTLQTSL----FKIED----VDIRKGMETLLLKAMQRAKYY 720
Query: 584 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKN 643
+G+ +D HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 721 VAGNMTEDQRQ-HYVLNLPVYTHFTNPSRRYADIIVHRQLEAVLS--------------- 764
Query: 644 NHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACR 703
+ + + +E L A CN++K + +
Sbjct: 765 ----------------NSECTDDVEN------------------LTKTAEQCNNKKDSAQ 790
Query: 704 NVKDACVKLYMWILLKKKEV-----LLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
++ V + ++ KK L+SE VL + + I + E+R++ D++
Sbjct: 791 TAQEQSVHIESCRIMDKKRSEIGGDLISEGIVLCVYESAFDVLIPEYGFEKRVHCDQL 848
>gi|188586620|ref|YP_001918165.1| ribonuclease R [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351307|gb|ACB85577.1| ribonuclease R [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 709
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/443 (33%), Positives = 228/443 (51%), Gaps = 41/443 (9%)
Query: 207 VAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVP 265
V A+I W + + P+ ++ V G + I I+ + + + P+ L VP
Sbjct: 178 VVAQITGWPDTPAKNPEGEIIKVIGNPSDPGVDIETIINKYGLS-EDYPPKVKEQLEEVP 236
Query: 266 WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPG 325
E+ ++ R+ ++ TID S A DLDDA+S+E+L +G +GVHIADVSY+V G
Sbjct: 237 NEISPKDYEGRELIQGLPTVTIDGSDAKDLDDAVSLEKLDNGNMELGVHIADVSYYVREG 296
Query: 326 TALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW 385
T LD EA+ R TSVY++ R +PMLP LS + SLNPGV+RL S F +L GD+ +
Sbjct: 297 TPLDKEARQRGTSVYLVDRVLPMLPPKLSNNICSLNPGVERLTMSAFVELTEEGDIANYR 356
Query: 386 IGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVS 445
+ +VI+S +L+YE ++ DG ++E E +P DV + + +S
Sbjct: 357 LTPSVIKSNYRLTYEEVNELFDGSKEIE------EKYP---------DVAWMLFEMKTIS 401
Query: 446 KILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE-- 503
+ L+++RF +GA+ E +PV + D+ G P R L EEFMLLAN+ AE
Sbjct: 402 EKLRERRFDEGAIDFEFDEPVVVLDDQGKPESVEKRARGSAEKLIEEFMLLANRVVAEHH 461
Query: 504 -VIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSG-----QFHQSLEQARE 557
+ F + R H P+ K+ F F SK G L +F + LE+A++
Sbjct: 462 YNLDMPF----IYRVHEQPDDEKVSTFREFASKFGYYLPKPEGEEIYPIEFQKVLEEAKD 517
Query: 558 KLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDL 617
++ + +L R M+ A Y GH+ L+F YTHFTSP+RRYPDL
Sbjct: 518 TREERAISTMML-----RSMKQARYAAES-------LGHFGLSFQYYTHFTSPIRRYPDL 565
Query: 618 VVHRTLNAALEAEKLYWKHRRML 640
VVHR + + + L ++ L
Sbjct: 566 VVHRIMREIITKKDLKEARQKKL 588
>gi|41581219|emb|CAE47868.1| protein phosphatase ssd1 homologue, putative [Aspergillus fumigatus]
Length = 1388
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 188/680 (27%), Positives = 304/680 (44%), Gaps = 97/680 (14%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G +V++IER + G +G L +Q K + + A++ S+ DR+ +
Sbjct: 596 GHIVAVIERIAGQMFSGTLGLLRPSSQATKEKQEAERQAREGGSARQQHDRQQEKPKIVW 655
Query: 170 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P D ++K E + + A I W S P ++
Sbjct: 656 FKPTDKRVPLIAIPTEQAPRDFVEKHQEYAN-----RIFVACIKRWPITSLHPFGTLVEQ 710
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIF 285
G G+++ + +A+L +N FS L + W V E L SR+D R+ F
Sbjct: 711 LGEMGDLKVETDALLRDNNFGADEFSDAVLKSIGWEDWSVSSEGDALLESRRDFRSETTF 770
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
TIDPS A +LD+A I+ L+DG +G+H++D+++FV + +D EA+ R T+VY++ R
Sbjct: 771 TIDPSGAIELDNAYHIKPLADGKVEIGIHVSDIAHFVKANSLVDREAKKRGTAVYLMDRL 830
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRTVIRSCCKLSYEHAQ 403
+ MLP +S E+ SL P DRL S+ + N VD WIG+++I+S +LSY+
Sbjct: 831 VNMLPRRVSTELCSLLPEQDRLTVSVVFTANPETGAVDDDVWIGKSIIKSAGRLSYDEVN 890
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
+I G+ +V + I++L +++ ++ RF + R+ N
Sbjct: 891 SVIKGETNVSVAGI----------------SANIIQTLNTITRKFREARFGN---RVSNP 931
Query: 464 KPVFL---FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
P+ L D+ P + + D L EE AN A + A PD A LRR P+
Sbjct: 932 PPLRLLYQLDDENVPVERNIFDSTDARELVEELRHKANFFVARKLVSAMPDKAFLRRQPS 991
Query: 521 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAR-EKLKDDYVLFDILINYAT--RPM 577
PN R+L F ++ G D SSSG SL + + + L+ VL L++ +
Sbjct: 992 PNSRRLHSFIDRMNRLGYDFDPSSSGTLQSSLCKVQDDDLRKVRVLLRTLLHSTDILTGI 1051
Query: 578 QLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
+ A Y+ + +D+ HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1052 RRAKYYVASTVQDEQRH-HYTLNLPVYTHFTNPSRRYADIIVHRQLEAVLS--------- 1101
Query: 638 RMLPKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCND 697
G D ESL AD+ CN
Sbjct: 1102 -----------------NGAIDFSDDVESLSK--------------TADL-------CNT 1123
Query: 698 RKLACRNVKDACVKLYMWILLKKKEV-----LLSEARVLALGPRFMTIYIEKLAIERRIY 752
+K + N ++ V + + KK L+SE VL + + I + E+R++
Sbjct: 1124 KKDSAHNAQEQSVHIQACRSMDKKRQEIGGDLISEGIVLCVYESAFDVLIPEFGFEKRVH 1183
Query: 753 YDEVEGLIVEWLETTSTLVL 772
D++ E+ + T L L
Sbjct: 1184 CDQLPLKKAEYRKETRVLEL 1203
>gi|422851224|ref|ZP_16897894.1| ribonuclease R [Streptococcus sanguinis SK150]
gi|325694812|gb|EGD36717.1| ribonuclease R [Streptococcus sanguinis SK150]
Length = 782
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 240/451 (53%), Gaps = 30/451 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLAGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G + E + ++ +V SI S+
Sbjct: 358 KHTITQTVIKTTFRMTYSDVNDIIAG--NQEKAE-------------QFKAIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ +++ Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTANSMSQQALQDIMEAVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TLNAALEAEKLYWKHRRMLPKNNHREGVRGR 652
+ +++ + +++P+ + R R
Sbjct: 573 MVRDYGKSKAIAEHFEQVIPEIASQSSSRER 603
>gi|125718408|ref|YP_001035541.1| VacB/Rnb family exoribonuclease [Streptococcus sanguinis SK36]
gi|125498325|gb|ABN44991.1| Exoribonuclease, VacB/Rnb family, putative [Streptococcus sanguinis
SK36]
Length = 782
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 239/451 (52%), Gaps = 30/451 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPEAPTESDLAGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD +A R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKDALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G E Q + +V SI S+
Sbjct: 358 KNTITQTVIKTTFRMTYSDVNDIIAGN---------QEKAEQ------FKAIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ +++ Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTANSMSQQALQDIMEAVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TLNAALEAEKLYWKHRRMLPKNNHREGVRGR 652
+ +++++ +++P+ + R R
Sbjct: 573 MVRDYSKSKEIAEHFEQVIPEIASQSSSRER 603
>gi|422884558|ref|ZP_16931006.1| ribonuclease R [Streptococcus sanguinis SK49]
gi|332358988|gb|EGJ36809.1| ribonuclease R [Streptococcus sanguinis SK49]
Length = 782
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 238/451 (52%), Gaps = 30/451 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLEGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G E Q + +V SI S+
Sbjct: 358 KHAITQTVIKTTFRMTYSDVNDIIAGN---------QEKAEQ------FKAIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SKHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TLNAALEAEKLYWKHRRMLPKNNHREGVRGR 652
+ +++++ +++P+ + R R
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPEIASQSSSRER 603
>gi|342876175|gb|EGU77833.1| hypothetical protein FOXB_11697 [Fusarium oxysporum Fo5176]
Length = 958
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 179/566 (31%), Positives = 264/566 (46%), Gaps = 80/566 (14%)
Query: 75 INGHHPSTSDSTEKVSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIV 134
I + + + ++ + S ++ + R + +S +PT +VV +I+R+ R+ V
Sbjct: 334 ITKNENADVEESQDLVSEKERKALQEQVRKTQKSASESKPQPTAKVVGVIKRNWRQ--YV 391
Query: 135 GFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKR 194
G ++ + RK ++ + L P K PK+ + + + D + KR
Sbjct: 392 GHIDPSSASKGSSQGRK-------------QDSVFLIPMDKKIPKIRLRTRQVADLLGKR 438
Query: 195 LEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFS 254
L LV ID W +S P H + G + A+L E + F
Sbjct: 439 L----------LVT--IDAWERDSRHPVGHFVRSLGELETKSAETEALLLEWDVQYRPFP 486
Query: 255 PESLSCLP--CVPWEVPQEE----LLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGI 308
L CLP W VP R+DLR I +IDP D+DDAL ++L +G
Sbjct: 487 KTVLDCLPREGHDWRVPTSMEDPGWRQREDLRGLLICSIDPVGCQDIDDALHAKQLPNGN 546
Query: 309 SRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLA 368
VGVHIADVS FV P A+D EA +R T+VY++ ++I MLP LL ++ SL P V+R A
Sbjct: 547 YEVGVHIADVSNFVKPANAMDTEASIRGTTVYLVDKRIDMLPPLLGTDLCSLKPYVERFA 606
Query: 369 FSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQ 428
FS+ W+LN D+V+ ++VI+S SYE AQ ID +
Sbjct: 607 FSVLWELNDNADIVNVRFTKSVIKSREAFSYEQAQLRID-------------------DE 647
Query: 429 FEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-PVFLFDEYGTPYDSVLSGREDLN 487
+ D+ + ++ L +SK LK KR GAL L + + V E P D D N
Sbjct: 648 SQQDDLTKGMRMLLMLSKKLKKKRMDAGALSLSSPEVKVQTESETSDPIDVKTKQLLDTN 707
Query: 488 FLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQ 547
L EEFML AN + A I AFP +A+LRRH AP + L + Q +++ S
Sbjct: 708 SLVEEFMLFANVSVAAKIYEAFPQTAILRRHAAPQRQTLTNY---------QTNSAPSVA 758
Query: 548 FHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHF 607
+ AR P+ YFCSG + ++ HY LA +YTHF
Sbjct: 759 WSCGPTPAR-----------------PLPILWIKYFCSGT-QAYPEFRHYGLASEIYTHF 800
Query: 608 TSPLRRYPDLVVHRTLNAALEAEKLY 633
TSP+RRY DL+ HR L AA++ E ++
Sbjct: 801 TSPIRRYADLLAHRQLAAAIDYEAIH 826
>gi|340377383|ref|XP_003387209.1| PREDICTED: DIS3-like exonuclease 1 [Amphimedon queenslandica]
Length = 1002
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 204/694 (29%), Positives = 313/694 (45%), Gaps = 108/694 (15%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RPTGRVV I+ RS RD I F + NYK E + + P
Sbjct: 291 RPTGRVVGILLRS-NRDIIASFPEESASSNYK------------------LEKVLVIPYD 331
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ PK+ I RL ++ + R D W+ S +P H + G G+
Sbjct: 332 IRIPKI---------RISTRLSN---ELKHHRIVVRFDNWDINSYYPNGHFVRSIGPIGD 379
Query: 235 VEPQINAILYENAICCSGFSPESLSCLP-CVPWEVPQEELLSRKDLR-NFCIFTIDPSTA 292
E +I AIL EN + S F+ LS LP W++ ++EL +R DLR + I++IDP
Sbjct: 380 TETEIQAILIENELSTSSFTQSILSELPDGDSWKIEEKELKNRIDLRESHLIYSIDPKGC 439
Query: 293 TDLDDALSIERLSDG---ISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPML 349
D+DD LS+ + G +GVHIADVSYFV G+ D EA+ RST+VY+ R+ ML
Sbjct: 440 EDVDDTLSVRLVYSGHFKFIELGVHIADVSYFVRSGSYTDREARERSTTVYLADRRYDML 499
Query: 350 PVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRW-IGRTVIRSCCKLSYEHAQDII-- 406
P +LS + SL VDR A S+ LN ++ + RT+IRS KL+YE AQD+
Sbjct: 500 PAVLSSNLCSLLSNVDRYAVSVLCRLNPRDFSIESVSVRRTIIRSAYKLTYEVAQDLFED 559
Query: 407 -DGKFDVESSNTLGEG--WPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
D K+ ++S L E P + + SD+ +SIK L E++++L++KR +GA+ LE
Sbjct: 560 KDDKYIIDSIPELSESKLTPSELAK-KVSDLRQSIKKLVEIARVLREKRNRNGAVELEGV 618
Query: 464 KPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNM 523
+ + D + +++ E M+ AN+ A+ I+ P ALLR H AP
Sbjct: 619 EVKIQMTDKDNIDDIIPKKVLEVHETVAECMIFANELVAKDISLHLPSKALLRSHAAPPQ 678
Query: 524 RKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYF 583
+ ++ S +D S+ + QSL +A + D + +L AT+ M A Y
Sbjct: 679 DQFSLLKSCASARNYTIDARSNFKLAQSLNKAVDVT--DPEVNKVLRMLATQAMIQALYT 736
Query: 584 CSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKN 643
+G + HY L YTHFTSP+RRY DL+VHR L +
Sbjct: 737 STGP-GSNHHLSHYGLGIKHYTHFTSPIRRYADLLVHRQLLS------------------ 777
Query: 644 NHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACR 703
YDK ++ + +P L + H ND+K A +
Sbjct: 778 --------------IYDKGRSDDV--------------IPDDSELQRICEHMNDKKRAAK 809
Query: 704 NVKDACVKLY--MWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGLIV 761
+ L+ ++ L + ++EA V + + Y + I+ +Y+ + G +V
Sbjct: 810 RAQLESSALFQGLYFLNASRAGTVTEAIVYNIRANGVMAYSPRYGIQSPVYFKDKSGRLV 869
Query: 762 -----------EWLETTSTL---VLSLCAHKRSF 781
W+E + T + + H SF
Sbjct: 870 LSPKVDDPNTLNWIEGSITFNDHSIKVTTHHSSF 903
>gi|319789562|ref|YP_004151195.1| ribonuclease R [Thermovibrio ammonificans HB-1]
gi|317114064|gb|ADU96554.1| ribonuclease R [Thermovibrio ammonificans HB-1]
Length = 716
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 165/444 (37%), Positives = 239/444 (53%), Gaps = 46/444 (10%)
Query: 193 KRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQIN-AILYENAICCS 251
K +E GD + +E+V+ + E+ P V+ G+ G P+++ ++ +
Sbjct: 178 KNVENGDYVV-VEIVS-----YPSETRGPVGKVVENLGKTG---PKLDIELIIRKYDLPT 228
Query: 252 GFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRV 311
F PE L +P EV +EE+ R DLR FTID A D DDA++IE+L +G R+
Sbjct: 229 EFPPEVLEEAEQIPLEVSEEEVKGRVDLRQQLCFTIDGENARDFDDAVAIEKLPNGNYRL 288
Query: 312 GVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSI 371
VHIADVS++V PG+ALD EA R TSVY R IPMLP LS + SLNP VDRL F+
Sbjct: 289 FVHIADVSHYVKPGSALDREAYRRGTSVYFPDRCIPMLPERLSNGICSLNPNVDRLTFTC 348
Query: 372 FWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEW 431
++N G VVD I ++I S +L+Y AQ I+DG D E+ E +P
Sbjct: 349 EMEINKKGMVVDYKIYESIIHSKARLTYTIAQRILDG--DREAI----EQFPH------- 395
Query: 432 SDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFE 491
VV S+K++ E++KIL KR+ G+L + +PV + + G P D + R + + E
Sbjct: 396 --VVESLKTMLELAKILNKKRYKRGSLDFDLPEPVVVLNAEGEPVDIYKAERLWSHRIIE 453
Query: 492 EFMLLANKTAAEVIA-RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS----G 546
EFM+ AN+T AE + +P ++ R H +P+ KL+EF F G+++ +
Sbjct: 454 EFMIAANETVAEYMFWTDYP--SIYRVHESPDREKLQEFLNFVRSLGIRVPAVKNDIQPK 511
Query: 547 QFHQSLEQAREKLKDDYVLFDILINY-ATRPMQLASYFCSGDFKDDTDWGHYALAFPVYT 605
+ LEQ K ++ L+NY R M A Y S D + GH+ LA YT
Sbjct: 512 LLQKILEQVEGKPEEK------LVNYLMLRTMARAKY--SPD-----NIGHFGLASTYYT 558
Query: 606 HFTSPLRRYPDLVVHRTLNAALEA 629
HFTSP+RRY DL +HR + AL+
Sbjct: 559 HFTSPIRRYADLQLHRLVKMALKG 582
>gi|449329650|gb|AGE95920.1| dis3 rnase II family protein [Encephalitozoon cuniculi]
Length = 835
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 167/520 (32%), Positives = 247/520 (47%), Gaps = 62/520 (11%)
Query: 190 SIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC 249
+I+ R + + + L ID W S +P H G G+ ++ A+L N I
Sbjct: 298 AIRIRTSQAEELMNKRL-CVEIDGWERTSNYPSGHYYRRLGTLGDRNAEMEAVLVANGIT 356
Query: 250 CSGFSPESLSCLPCVPW--------EVPQEELL--SRKDLRNFCIFTIDPSTATDLDDAL 299
+ ++ + + VPW E E+ +R+D R + +IDP D+DDAL
Sbjct: 357 ---YYNKNWAEILRVPWMNEDIFGIEKAYNEVREGTREDFRELSVVSIDPPDCEDIDDAL 413
Query: 300 SIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGS 359
L +G VGVHIADV+Y+V G+ +D A R T++Y+ + +I MLP LS ++ S
Sbjct: 414 HCRLLPNGNWEVGVHIADVTYYVTKGSEIDKIAADRGTTIYLPEWRIDMLPPALSTDLCS 473
Query: 360 LNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLG 419
L G DR AFS+ W+++S VV R++IRS SY A D + G D
Sbjct: 474 LVAGKDRAAFSVVWEMSSDVRVVRTHFCRSLIRSKRSFSYNEAYDAVQGLVDA------- 526
Query: 420 EGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSV 479
+V RS++ L E+S++L+ +RF G+L L + +F E G
Sbjct: 527 -----------GDEVSRSLRMLLEISRVLRSRRFAKGSLDLSTRQ--LVFREGGFEMKEY 573
Query: 480 LSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ 539
NFL EEFM+LAN + A I PDS+LLR+HP P++ + GL
Sbjct: 574 FP----TNFLVEEFMVLANISVASFIYHHHPDSSLLRKHPPPSVLDI----------GLD 619
Query: 540 LDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYAL 599
+DTSS +SLE K + V D+ R M A Y SG + HY L
Sbjct: 620 IDTSSPRALSESLE------KMEGVRKDLAKRMLIRSMNQAVYVVSG---ETPSLHHYGL 670
Query: 600 AFPVYTHFTSPLRRYPDLVVHRTLNAALEA--EKLYWKHRRMLPKNNHREGVRGRFLTGI 657
A P+YTHFTSP+RRY D++VHR LN L+ K ++ + R+ G + +
Sbjct: 671 ATPIYTHFTSPIRRYADIIVHRILNHILQTAPTKEAQINKLGIVTFRARKRTDGESMEEV 730
Query: 658 FYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCND 697
F D+D ++ R AA K + C + V +A D
Sbjct: 731 FVDEDMCRNMNSRHR---AARKAALECDKLTVYMALRNED 767
>gi|288928627|ref|ZP_06422473.1| ribonuclease R [Prevotella sp. oral taxon 317 str. F0108]
gi|288329611|gb|EFC68196.1| ribonuclease R [Prevotella sp. oral taxon 317 str. F0108]
Length = 732
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 152/441 (34%), Positives = 239/441 (54%), Gaps = 24/441 (5%)
Query: 191 IKKRLEEGDATIEMELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC 249
+ KR +G T + +V ++ +W + E V+ V G GE + +++AIL + +
Sbjct: 175 VPKRKLKGGKTGDKAVV--KVTQWPDAEHKNIMGEVIDVLGPTGENDVEMHAILAQYGLP 232
Query: 250 CSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 309
+ + + + E+ Q++ R+D RN TIDP A D DDALSI L G+
Sbjct: 233 YT-YPKAAEEAAERISAEITQKDYDEREDFRNVFTCTIDPRDAKDFDDALSIRMLDKGLW 291
Query: 310 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 369
+VGVHIADVS++V G+ +D EA R+TSVY++ R IPMLP L + SL P ++LA+
Sbjct: 292 QVGVHIADVSHYVTEGSIIDKEAMKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAY 351
Query: 370 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 429
S+ ++++ D+ I TVI+S + +YE Q +++ V+ + P+ +
Sbjct: 352 SVIFNMDENADIKAYRIVHTVIKSDRRYAYEEVQQLLEDNGVVDGTGEPAPPAPKGGYKG 411
Query: 430 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFL 489
E +D S+ L +++K L++KRF +GA++ + + F DE G P + +D N L
Sbjct: 412 ENAD---SLIMLDKLAKKLREKRFKNGAVKFDREELHFDVDEQGKPIRAYFKRSKDANKL 468
Query: 490 FEEFMLLANKTAAEVIARA----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 545
EEFMLLANKT AE + + P + R H P+ +KL F K G +L T+S+
Sbjct: 469 IEEFMLLANKTVAESVGKPKGGRTPKTLPYRIHDNPDPQKLENLREFIMKFGYKLKTTST 528
Query: 546 -GQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFP 602
G+ +SL + +++ K + L + + A R M A Y + GH+ LAF
Sbjct: 529 KGETSRSLNKLMDEVAGKREQNLIETI---ALRAMMKAKYSIH-------NIGHFGLAFD 578
Query: 603 VYTHFTSPLRRYPDLVVHRTL 623
YTHFTSP+RRYPD +VHR L
Sbjct: 579 YYTHFTSPIRRYPDTMVHRLL 599
>gi|212542579|ref|XP_002151444.1| cell wall biogenesis protein phosphatase Ssd1, putative [Talaromyces
marneffei ATCC 18224]
gi|210066351|gb|EEA20444.1| cell wall biogenesis protein phosphatase Ssd1, putative [Talaromyces
marneffei ATCC 18224]
Length = 1339
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 180/673 (26%), Positives = 300/673 (44%), Gaps = 92/673 (13%)
Query: 118 GRVVSIIERSPRR--DGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQL 170
G +V++IER + G +G L + + + A ++ DR+ +
Sbjct: 556 GHIVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERAARDGGHGRQHDRQQDKPKIVWF 615
Query: 171 TPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
PT + P + + + P D ++K + + + A I W S P ++
Sbjct: 616 KPTDKRVPLIAIPTEQAPRDFVEKHQDYAN-----RIFVACIKRWPITSLHPFGTLVEQL 670
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFT 286
G G+++ + +A+L +N FS L + W V E +R+DLR+ FT
Sbjct: 671 GEMGDLKVETDALLRDNNFAADEFSEAVLKNVGWEDWTVASEGDALFTNRRDLRDETTFT 730
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP+ +LDDA+ I++L DG +G+H+ADV++FV + +D EA+ R T V+++ R +
Sbjct: 731 IDPTGTKELDDAIHIKKLGDGKVEIGIHVADVAHFVKANSLVDREAKKRGTGVHLMTRVV 790
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRTVIRSCCKLSYEHAQD 404
MLP LS EV SL PG +RL S+ + +++ VD WIG++VI+S KLSY+
Sbjct: 791 NMLPPRLSNEVCSLVPGQERLTVSVVFQVDTVTGAVDDDVWIGKSVIKSSGKLSYDDVNS 850
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
I+G G G P E + I+ L ++ K+ RF + + +
Sbjct: 851 AING----------GTGSP-----LEGVN-ADDIRLLGAITTKFKEARFGNRTTNIPAMR 894
Query: 465 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 524
++ D+ P + + + + EE AN A + A P+ A LRR PN R
Sbjct: 895 LIYQLDDENMPVELNIFDSSPAHEVIEELNYKANFFVARKLFAAMPEKAFLRRQAVPNPR 954
Query: 525 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 584
+L+ F ++ G +D SSSG SL + + D L + + MQ A Y+
Sbjct: 955 RLQAFVDRVNRLGYDIDPSSSGSLQASLFKVQ-----DVDLRKGMETILIKAMQRAKYYV 1009
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNN 644
+G+ + HYAL P+Y HFTSP RRY D++VHR L+A
Sbjct: 1010 AGNVT-EAQRQHYALNLPLYAHFTSPTRRYADVIVHRQLDA------------------- 1049
Query: 645 HREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRN 704
LS A+++ D LV +A CN++K + N
Sbjct: 1050 ---------------------------VLSNGAIEF-TEDVDTLVKIAEQCNNKKDSAHN 1081
Query: 705 VKDACVKLYMWILLKKKEV-----LLSEARVLALGPRFMTIYIEKLAIERRIYYDEVEGL 759
++ V + ++ KK L+SE VL + + + + E+R++ D++
Sbjct: 1082 AQEQSVHIESCRVMDKKRSELGGDLISEGIVLCVYESAFDVLLPEFGFEKRVHCDQLPLK 1141
Query: 760 IVEWLETTSTLVL 772
E+ + T L L
Sbjct: 1142 KAEYRKDTRVLEL 1154
>gi|322385827|ref|ZP_08059470.1| ribonuclease R [Streptococcus cristatus ATCC 51100]
gi|417922355|ref|ZP_12565843.1| ribonuclease R [Streptococcus cristatus ATCC 51100]
gi|321270112|gb|EFX53029.1| ribonuclease R [Streptococcus cristatus ATCC 51100]
gi|342832452|gb|EGU66747.1| ribonuclease R [Streptococcus cristatus ATCC 51100]
Length = 782
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 238/451 (52%), Gaps = 30/451 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLIDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + + R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPSENDFEGRVDLREEITFTIDGADAKDLDDAVHIKRLKNGHFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI + +++Y DII G D E + ++ +V SI S+
Sbjct: 358 KHIITQTVINTTFRMTYSDVNDIIAG--DQEKAE-------------QFKAIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
+ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 RLHEILESMRFKRGALNFDTNEAKIIVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TLNAALEAEKLYWKHRRMLPKNNHREGVRGR 652
+ +++++ +++P+ + R R
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPEIASQSSSRER 603
>gi|188994260|ref|YP_001928512.1| ribonuclease R [Porphyromonas gingivalis ATCC 33277]
gi|188593940|dbj|BAG32915.1| ribonuclease R [Porphyromonas gingivalis ATCC 33277]
Length = 731
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 152/426 (35%), Positives = 221/426 (51%), Gaps = 35/426 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V RI EW E+S P V V G G+ + ++NAIL E + + E +
Sbjct: 208 VIVRILEWPEQSKNPIGEVQAVLGPAGDNDAEMNAILAEFGLPYV-YPQEVEEAADRLDG 266
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
++ +EEL R+D R+ FTIDP A D DDA+S L D VGVHIADVS++V G
Sbjct: 267 KITEEELARREDFRSVLTFTIDPKDAKDFDDAISFRPLEDDCYEVGVHIADVSHYVTEGG 326
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
+D EA R+TS+Y++ R IPMLP L ++ SL P ++ A+S + +N V+D I
Sbjct: 327 IIDQEAYNRATSIYLVDRTIPMLPERLCNDLCSLRPDEEKYAYSCIFRMNDEAKVLDYRI 386
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
+VI+S + +YE AQ +I+ GEG D +I L E+++
Sbjct: 387 CHSVIKSDRRFAYEEAQAVIE----------TGEG-----------DCKEAILKLNELAQ 425
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
L+++RF +GA+ E + F DE G P ++ ++ N L EEFMLLAN+T A I
Sbjct: 426 RLREERFQNGAIAFERKEVRFEIDEKGRPLGVIVKESKEANKLIEEFMLLANRTVARHIG 485
Query: 507 RAF----PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSG-QFHQSLEQAREKLKD 561
+ + R H P+ KL F + G +L T+ S + +S+ + +++
Sbjct: 486 EETQGKRAKTFVYRIHDLPDPDKLETLSDFIRRFGYKLRTTGSNMEVSKSINSLLDNIQN 545
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+++ A R M A Y S D + GHY LAF YTHFTSP+RRYPDL+VHR
Sbjct: 546 KPEE-NLISTVAIRSMAKAIY--STD-----NIGHYGLAFDFYTHFTSPIRRYPDLMVHR 597
Query: 622 TLNAAL 627
L L
Sbjct: 598 LLTKYL 603
>gi|189502641|ref|YP_001958358.1| hypothetical protein Aasi_1319 [Candidatus Amoebophilus asiaticus
5a2]
gi|189498082|gb|ACE06629.1| hypothetical protein Aasi_1319 [Candidatus Amoebophilus asiaticus
5a2]
Length = 718
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 152/415 (36%), Positives = 211/415 (50%), Gaps = 37/415 (8%)
Query: 221 PQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLR 280
P+ ++ VFG GE + +I+ I+ E + F L+ + ++P+EE+ +RKD R
Sbjct: 211 PEGRIIEVFGPMGENDVEIHTIMAEFNLPTQ-FPENVLAETSAISIDIPKEEIAARKDFR 269
Query: 281 NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVY 340
TIDP A D DDALS++ L +G VGVHIADVSY+V + +D EA R TSVY
Sbjct: 270 EVFTITIDPEDAKDFDDALSLKILPNGHIEVGVHIADVSYYVQENSLVDQEAFERGTSVY 329
Query: 341 MLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYE 400
++ R IPM+P LS E+ SL P DR AFS ++L+ G + W G TVI S +LSYE
Sbjct: 330 LVDRTIPMIPERLSNELCSLKPHEDRPAFSAVFELDKQGSLHHEWFGETVIHSDQRLSYE 389
Query: 401 HAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRL 460
AQ I + +++L E I +L ++K L+ RF GA+
Sbjct: 390 EAQQAI-----TQPTHSLHE----------------QITTLNNLAKKLRADRFKSGAINF 428
Query: 461 ENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR-----AFPDSALL 515
+ F D+ G P + ED + L EEFMLLANK A + R FP + +
Sbjct: 429 DTPSVKFQLDKQGRPLSILPKVSEDSHRLIEEFMLLANKRVALHVRRMKQGKQFP-TFVY 487
Query: 516 RRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATR 575
R H PN+ +L +F F + G + + + QS+ E L I+ A R
Sbjct: 488 RTHDQPNLERLGDFALFVKQFGYSI-KAEPQEIAQSINVLSEGLAGKPEA-HIIQTLAIR 545
Query: 576 PMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAE 630
M A Y H+ LAF YTHFTSP+RRYPDL+VHR L L+ E
Sbjct: 546 LMAKALYTTEAK-------PHFGLAFEHYTHFTSPIRRYPDLLVHRLLKKYLKGE 593
>gi|419970937|ref|ZP_14486407.1| ribonuclease R [Porphyromonas gingivalis W50]
gi|392609658|gb|EIW92462.1| ribonuclease R [Porphyromonas gingivalis W50]
Length = 731
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 152/426 (35%), Positives = 220/426 (51%), Gaps = 35/426 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V RI EW E+S P V V G G+ + ++NAIL E + + E +
Sbjct: 208 VIVRILEWPEQSKNPIGEVQAVLGPAGDNDAEMNAILAEFGLPYV-YPQEVEEAADRLDG 266
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
++ +EEL R+D R+ FTIDP A D DDA+S L D VGVHIADVS++V G
Sbjct: 267 KITEEELARREDFRSILTFTIDPKDAKDFDDAISFRPLEDDCYEVGVHIADVSHYVTEGG 326
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
+D EA R+TS+Y++ R IPMLP L ++ SL P ++ A+S + +N V+D I
Sbjct: 327 IIDQEAYNRATSIYLVDRTIPMLPERLCNDLCSLRPDEEKYAYSCIFRMNDEAKVLDYRI 386
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
+VI+S + +YE AQ +I+ GEG D +I L E+++
Sbjct: 387 CHSVIKSDRRFAYEEAQAVIE----------TGEG-----------DCKEAILKLNELAQ 425
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
L+ +RF +GA+ E + F DE G P ++ ++ N L EEFMLLAN+T A I
Sbjct: 426 RLRKERFQNGAIAFERKEVRFEIDEKGRPLGVIVKESKEANKLIEEFMLLANRTVARHIG 485
Query: 507 RAF----PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSG-QFHQSLEQAREKLKD 561
+ + R H P+ KL F + G +L T+ S + +S+ + +++
Sbjct: 486 EETQGKRAKTFVYRIHDLPDPDKLETLSDFIRRFGYKLRTTGSNVEVSKSINSLLDNIQN 545
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+++ A R M A Y S D + GHY LAF YTHFTSP+RRYPDL+VHR
Sbjct: 546 KPEE-NLISTVAIRSMAKAIY--STD-----NIGHYGLAFDFYTHFTSPIRRYPDLMVHR 597
Query: 622 TLNAAL 627
L L
Sbjct: 598 LLTKYL 603
>gi|313891252|ref|ZP_07824870.1| ribonuclease R [Streptococcus pseudoporcinus SPIN 20026]
gi|416851989|ref|ZP_11909134.1| ribonuclease R [Streptococcus pseudoporcinus LQ 940-04]
gi|313120319|gb|EFR43440.1| ribonuclease R [Streptococcus pseudoporcinus SPIN 20026]
gi|356739478|gb|EHI64710.1| ribonuclease R [Streptococcus pseudoporcinus LQ 940-04]
Length = 783
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 226/420 (53%), Gaps = 29/420 (6%)
Query: 223 AHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQ-EELLSRKDLRN 281
A+V + G G+V + +L E+ S F PE++ E P ++L+ R DLR
Sbjct: 200 ANVRDIVGHQGDVGIDVLEVL-ESMDIVSEF-PETVIAEANAISEAPSAKDLIGRVDLRK 257
Query: 282 FCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYM 341
FTID + A DLDDA+ I+ L++G +GVHIADVSY+V G+ALD EA R TSVY+
Sbjct: 258 EITFTIDGADAKDLDDAIHIKPLANGNYELGVHIADVSYYVTEGSALDQEAIARGTSVYV 317
Query: 342 LQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEH 401
R +PMLP LS + SLNP VDRL S +++S G V++ +I ++VI + +++Y
Sbjct: 318 TDRVVPMLPECLSNGICSLNPNVDRLTQSAIMEIDSNGKVLNHYICQSVINTTFRMTYSA 377
Query: 402 AQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLE 461
D++ G D E+ E+ + S++ + ++ KIL+ R GAL +
Sbjct: 378 VNDMLAG--DEETLQ-------------EYGAISESVEHMAKLHKILETMRLKRGALNFD 422
Query: 462 NSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARA-FPDSALLRRHPA 520
S+ L +E G P D V+ R + E FML+AN+ AE AR +P + R H
Sbjct: 423 TSEARILVNEKGMPVDIVVRTRGIAERMIESFMLVANECVAEHFARGHYP--FIYRVHEE 480
Query: 521 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLA 580
P KL++F + S G+Q+ +++ ++L+ K+ D ++L R MQ A
Sbjct: 481 PKSEKLQKFIDYASVFGIQIKGTAAKISQEALQDFMAKV-DGKPGAEVLNMMLLRSMQQA 539
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRML 640
Y +T+ GHY LA YTHFTSP+RRYPDL+VHR + +A + H M+
Sbjct: 540 RY-------SETNHGHYGLAADYYTHFTSPIRRYPDLLVHRMIREYSQATEDKRDHFAMI 592
>gi|68479109|ref|XP_716360.1| likely exosome component Dis1p [Candida albicans SC5314]
gi|68479238|ref|XP_716298.1| likely exosome component Dis1p [Candida albicans SC5314]
gi|46437964|gb|EAK97302.1| likely exosome component Dis1p [Candida albicans SC5314]
gi|46438027|gb|EAK97364.1| likely exosome component Dis1p [Candida albicans SC5314]
Length = 1004
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 237/476 (49%), Gaps = 48/476 (10%)
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
PK PK+ + + + + +R + +D W S +P H + G
Sbjct: 437 PKLPKIRIRTRKAREYLGQR------------IVVVVDSWPINSRYPNGHFVRALGEIES 484
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQ-------EELLSRKDLRNFCIF 285
E + A+L E+ + FS L CLP W VP +L R DLR+ +
Sbjct: 485 AEAETEALLLEHDVEYRPFSKNVLDCLPKEGDNWVVPDITNNTEDPQLQKRVDLRDKLVC 544
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
+IDP D+DDAL ++L +G VGVHIADV++FV P T LD E R TSVY++ ++
Sbjct: 545 SIDPPNCVDIDDALHAKQLPNGNYEVGVHIADVTHFVKPNTPLDQEGASRGTSVYLVDKR 604
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 405
I MLP LL + SL P VDR AFS+ W+++ ++V+ +++I+S SYE AQ
Sbjct: 605 IDMLPQLLGTNLCSLKPFVDRFAFSVIWEVDEDANIVNVNYMKSIIKSRQAFSYEQAQLR 664
Query: 406 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK- 464
ID + D+ +S++ L ++SK LK KR GAL L + +
Sbjct: 665 IDDP-------------------SQQDDLTKSMRILLKLSKKLKQKRLDAGALNLASPEV 705
Query: 465 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 524
V + E P + + + N L EEFML AN + A I A+P +A+LRRH AP
Sbjct: 706 KVHMDSETSDPQEVEIKKLLETNSLVEEFMLFANISVARKIYDAYPQTAMLRRHAAPPAT 765
Query: 525 KLREFEAFCS--KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
+ K+G+ + SS SL++ + D Y F+ L+ +TR M A
Sbjct: 766 NFETLNDMLNVRKNGMSISLESSKALADSLDRCIDP-NDKY--FNTLVRIMSTRCMMAAE 822
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
YF SG + ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 823 YFPSGSY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHR 877
>gi|238878371|gb|EEQ42009.1| exosome complex exonuclease RRP44 [Candida albicans WO-1]
Length = 1004
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 237/476 (49%), Gaps = 48/476 (10%)
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
PK PK+ + + + + +R + +D W S +P H + G
Sbjct: 437 PKLPKIRIRTRKAREYLGQR------------IVVVVDSWPINSRYPNGHFVRALGEIES 484
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQ-------EELLSRKDLRNFCIF 285
E + A+L E+ + FS L CLP W VP +L R DLR+ +
Sbjct: 485 AEAETEALLLEHDVEYRPFSKNVLDCLPKEGDNWVVPDITNNTEDPQLQKRVDLRDKLVC 544
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
+IDP D+DDAL ++L +G VGVHIADV++FV P T LD E R TSVY++ ++
Sbjct: 545 SIDPPNCVDIDDALHAKQLPNGNYEVGVHIADVTHFVKPNTPLDQEGASRGTSVYLVDKR 604
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDI 405
I MLP LL + SL P VDR AFS+ W+++ ++V+ +++I+S SYE AQ
Sbjct: 605 IDMLPQLLGTNLCSLKPFVDRFAFSVIWEVDEDANIVNVNYMKSIIKSRQAFSYEQAQLR 664
Query: 406 IDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK- 464
ID + D+ +S++ L ++SK LK KR GAL L + +
Sbjct: 665 IDDP-------------------SQQDDLTKSMRILLKLSKKLKQKRLDAGALNLASPEV 705
Query: 465 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 524
V + E P + + + N L EEFML AN + A I A+P +A+LRRH AP
Sbjct: 706 KVHMDSETSDPQEVEIKKLLETNSLVEEFMLFANISVARKIYDAYPQTAMLRRHAAPPAT 765
Query: 525 KLREFEAFCS--KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLAS 581
+ K+G+ + SS SL++ + D Y F+ L+ +TR M A
Sbjct: 766 NFETLNDMLNVRKNGMSISLESSKALADSLDRCIDP-NDKY--FNTLVRIMSTRCMMAAE 822
Query: 582 YFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
YF SG + ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 823 YFPSGSY-GYPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHR 877
>gi|34541350|ref|NP_905829.1| ribonuclease R [Porphyromonas gingivalis W83]
gi|34397666|gb|AAQ66728.1| ribonuclease R [Porphyromonas gingivalis W83]
Length = 702
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 152/426 (35%), Positives = 220/426 (51%), Gaps = 35/426 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V RI EW E+S P V V G G+ + ++NAIL E + + E +
Sbjct: 179 VIVRILEWPEQSKNPIGEVQAVLGPAGDNDAEMNAILAEFGLPYV-YPQEVEEAADRLDG 237
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
++ +EEL R+D R+ FTIDP A D DDA+S L D VGVHIADVS++V G
Sbjct: 238 KITEEELARREDFRSILTFTIDPKDAKDFDDAISFRPLEDDCYEVGVHIADVSHYVTEGG 297
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
+D EA R+TS+Y++ R IPMLP L ++ SL P ++ A+S + +N V+D I
Sbjct: 298 IIDQEAYNRATSIYLVDRTIPMLPERLCNDLCSLRPDEEKYAYSCIFRMNDEAKVLDYRI 357
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
+VI+S + +YE AQ +I+ GEG D +I L E+++
Sbjct: 358 CHSVIKSDRRFAYEEAQAVIE----------TGEG-----------DCKEAILKLNELAQ 396
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
L+ +RF +GA+ E + F DE G P ++ ++ N L EEFMLLAN+T A I
Sbjct: 397 RLRKERFQNGAIAFERKEVRFEIDEKGRPLGVIVKESKEANKLIEEFMLLANRTVARHIG 456
Query: 507 RAF----PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSG-QFHQSLEQAREKLKD 561
+ + R H P+ KL F + G +L T+ S + +S+ + +++
Sbjct: 457 EETQGKRAKTFVYRIHDLPDPDKLETLSDFIRRFGYKLRTTGSNVEVSKSINSLLDNIQN 516
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+++ A R M A Y S D + GHY LAF YTHFTSP+RRYPDL+VHR
Sbjct: 517 KPEE-NLISTVAIRSMAKAIY--STD-----NIGHYGLAFDFYTHFTSPIRRYPDLMVHR 568
Query: 622 TLNAAL 627
L L
Sbjct: 569 LLTKYL 574
>gi|334146390|ref|YP_004509317.1| ribonuclease R [Porphyromonas gingivalis TDC60]
gi|333803544|dbj|BAK24751.1| ribonuclease R [Porphyromonas gingivalis TDC60]
Length = 731
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 152/426 (35%), Positives = 220/426 (51%), Gaps = 35/426 (8%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V RI EW E+S P V V G G+ + ++NAIL E + + E +
Sbjct: 208 VIVRILEWPEQSKNPIGEVQAVLGPAGDNDAEMNAILAEFGLPYV-YPQEVEEAADRLDG 266
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
++ +EEL R+D R+ FTIDP A D DDA+S L D VGVHIADVS++V G
Sbjct: 267 KITEEELARREDFRSVLTFTIDPKDAKDFDDAISFRPLEDDCYEVGVHIADVSHYVTEGG 326
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
+D EA R+TS+Y++ R IPMLP L ++ SL P ++ A+S + +N V+D I
Sbjct: 327 IIDQEAYNRATSIYLVDRTIPMLPERLCNDLCSLRPDEEKYAYSCIFRMNDEAKVLDYRI 386
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
+VI+S + +YE AQ +I+ GEG D +I L E+++
Sbjct: 387 CHSVIKSDRRFAYEEAQAVIE----------TGEG-----------DCKEAILKLNELAQ 425
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
L+ +RF +GA+ E + F DE G P ++ ++ N L EEFMLLAN+T A I
Sbjct: 426 RLRKERFQNGAIAFERKEVRFEIDEKGRPLGVIVKESKEANKLIEEFMLLANRTVARHIG 485
Query: 507 RAF----PDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSG-QFHQSLEQAREKLKD 561
+ + R H P+ KL F + G +L T+ S + +S+ + +++
Sbjct: 486 EETQGKRAKTFVYRIHDLPDPDKLETLSDFIRRFGYKLRTTGSNVEVSKSINSLLDNIQN 545
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
+++ A R M A Y S D + GHY LAF YTHFTSP+RRYPDL+VHR
Sbjct: 546 KPEE-NLISTVAIRSMAKAIY--STD-----NIGHYGLAFDFYTHFTSPIRRYPDLMVHR 597
Query: 622 TLNAAL 627
L L
Sbjct: 598 LLTKYL 603
>gi|307708609|ref|ZP_07645073.1| ribonuclease R [Streptococcus mitis NCTC 12261]
gi|307615358|gb|EFN94567.1| ribonuclease R [Streptococcus mitis NCTC 12261]
Length = 784
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 153/441 (34%), Positives = 238/441 (53%), Gaps = 30/441 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDVPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I +TVI++ +++Y DI+ G DVE E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYNDVNDILAG--DVEKRQ-------------EYQKIVPSIELMAK 402
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ +IL++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHEILENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGVAERMIESFMLMANETVAE 462
Query: 504 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 563 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 622 TLNAALEAEKLYWKHRRMLPK 642
+ ++++ +++P+
Sbjct: 572 MIRDYSRSKEIAEHFEQVIPE 592
>gi|19173030|ref|NP_597581.1| similarity to DIS3 PROTEIN (RNASE II FAMILY) [Encephalitozoon
cuniculi GB-M1]
gi|19168697|emb|CAD26216.1| similarity to DIS3 PROTEIN (RNASE II FAMILY) [Encephalitozoon
cuniculi GB-M1]
Length = 835
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 173/571 (30%), Positives = 263/571 (46%), Gaps = 88/571 (15%)
Query: 190 SIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC 249
+I+ R + + + L ID W S +P H G G+ ++ A+L N I
Sbjct: 298 AIRIRTSQAEELMNKRL-CVEIDGWERTSNYPSGHYYRRLGTLGDRNAEMEAVLVANGIT 356
Query: 250 CSGFSPESLSCLPCVPW--------EVPQEELL--SRKDLRNFCIFTIDPSTATDLDDAL 299
+ ++ + + VPW E E+ +R+D R I +IDP D+DDAL
Sbjct: 357 ---YYNKNWAEILRVPWMNEDIFGMEKAYNEVREGTREDFRELSIVSIDPPDCEDIDDAL 413
Query: 300 SIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGS 359
L +G VGVHIADV+Y+V G+ +D A R T++Y+ + +I MLP LS ++ S
Sbjct: 414 HCRLLPNGNWEVGVHIADVTYYVTKGSEIDKIAADRGTTIYLPEWRIDMLPPALSTDLCS 473
Query: 360 LNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLG 419
L G DR AFS+ W+++S VV R++IRS SY A D + G D
Sbjct: 474 LVAGKDRAAFSVVWEMSSDVRVVRTHFCRSLIRSKRSFSYNEAYDAVQGLVDA------- 526
Query: 420 EGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSV 479
+V RS++ L E+S++L+ +RF G+L L + +F E G
Sbjct: 527 -----------GDEVSRSLRMLLEISRVLRSRRFAKGSLDLSTRQ--LVFREGGFEMKEY 573
Query: 480 LSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ 539
NFL EEFM+LAN + A I PDS+LLR+HP P++ + GL
Sbjct: 574 FP----TNFLVEEFMVLANISVASFIYHHHPDSSLLRKHPPPSVLDI----------GLD 619
Query: 540 LDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYAL 599
+DTSS +SLE K + V D+ R M A Y SG + HY L
Sbjct: 620 IDTSSPRALSESLE------KMEGVRKDLAKRMLIRSMNQAVYVVSG---ETPSLHHYGL 670
Query: 600 AFPVYTHFTSPLRRYPDLVVHRTLNAALEA--EKLYWKHRRMLPKNNHREGVRGRFLTGI 657
A P+YTHFTSP+RRY D++VHR LN L+ K ++ + R+ G + +
Sbjct: 671 ATPIYTHFTSPIRRYADIIVHRILNHILQTAPTKEAQINKLGIVTFRARKRTDGESMDEV 730
Query: 658 FYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDACVKLYMWIL 717
F D+D ++ N R A R C KL +++
Sbjct: 731 FVDEDMCRNM----------------------------NSRHRAARKAAWECDKLTVYMA 762
Query: 718 LKKKEVLLSEARVLALGPRFMTIYIEKLAIE 748
L+ +E ++ V + P + +Y+ + ++E
Sbjct: 763 LRNEEPVV-RGFVTNIKPNGIVVYVPEYSLE 792
>gi|401681512|ref|ZP_10813412.1| ribonuclease R [Streptococcus sp. AS14]
gi|400186282|gb|EJO20495.1| ribonuclease R [Streptococcus sp. AS14]
Length = 782
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 244/454 (53%), Gaps = 36/454 (7%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR IFTID + A DLDDA+ I+RL +G +GVHIADVS +V
Sbjct: 238 RVPDAPTESDLEGRLDLREEVIFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSNYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G + E + ++ +V SI S+
Sbjct: 358 KHIITQTVIKTTFRMTYSDVNDIIAG--NQEKAE-------------QFKAIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGTASSMSQQALQDIMEAVKD 520
Query: 562 ---DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
+ VL +L+ R MQ A Y + + GHY LA YTHFTSP+RRYPDL+
Sbjct: 521 QPYEEVLSMMLL----RSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLL 569
Query: 619 VHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGR 652
VHR + +++++ +++P+ + R R
Sbjct: 570 VHRMVQDYGKSKEIAEHFEQVIPEIASQSSSRER 603
>gi|445374334|ref|ZP_21426382.1| exoribonuclease R [Streptococcus thermophilus MTCC 5460]
gi|445388839|ref|ZP_21428097.1| exoribonuclease R [Streptococcus thermophilus MTCC 5461]
gi|444750587|gb|ELW75389.1| exoribonuclease R [Streptococcus thermophilus MTCC 5461]
gi|444750684|gb|ELW75480.1| exoribonuclease R [Streptococcus thermophilus MTCC 5460]
Length = 817
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 231/434 (53%), Gaps = 33/434 (7%)
Query: 195 LEEGDATIE-MELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 252
+++G +E E++ I+++ N + V + G G+ + +L E+ S
Sbjct: 170 IKKGPVALEGTEIIKVDIEKYPNRHHDYFVGSVRDIIGHQGDAGIDVLEVL-ESMDIVSE 228
Query: 253 FSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
F + ++ VP QE+L+ R DLR FTID + A DLDDA+ I+RL +G +G
Sbjct: 229 FPEDVIAEAEAVPDAPSQEDLIGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPNGNYELG 288
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVSY+V G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDRL S
Sbjct: 289 VHIADVSYYVTEGSALNREAAARGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTLSAI 348
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
++ G V++ I ++VI++ +++Y DV N + G P+ QF+
Sbjct: 349 MEITPKGKVINHKICQSVIKTTFRMTYS----------DV---NEMLAGNPEKIEQFKP- 394
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE 492
++ S+ ++ E+ KIL+D R GAL + S+ L ++ G P D V+ R + E
Sbjct: 395 -IMDSVSAMAELHKILEDMRERRGALNFDTSEARILVNDKGMPVDIVVRERGTAERMIES 453
Query: 493 FMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 551
FML AN+ AE A+A P + R H P KL+ F + S G+Q+ +++
Sbjct: 454 FMLAANECVAEHFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGIQIKGTATKMDQLD 511
Query: 552 LEQ--AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
L+ AR + K + ++++ R MQ A Y + + GHY LA YTHFTS
Sbjct: 512 LQDFMARVQGKPGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQYYTHFTS 561
Query: 610 PLRRYPDLVVHRTL 623
P+RRYPDL+VHR +
Sbjct: 562 PIRRYPDLLVHRMI 575
>gi|422820841|ref|ZP_16869034.1| ribonuclease R [Streptococcus sanguinis SK353]
gi|324991459|gb|EGC23392.1| ribonuclease R [Streptococcus sanguinis SK353]
Length = 782
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 155/451 (34%), Positives = 236/451 (52%), Gaps = 30/451 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 238 RVPDAPTESDLAGRLDLREEITFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSYYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G E Q + +V SI S+
Sbjct: 358 KHAITQTVIKTTFRMTYSDVNDIIAGN---------QEKAEQ------FKAIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
+ +IL+ RF GAL + ++ + ++ G P D VL R + E FML AN+T A
Sbjct: 403 RLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLAANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E + P + R H P K+++F + S G+++ ++S Q+L+ E +KD
Sbjct: 463 EHFTKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGVRIYGTASSMSQQALQDIMEAVKD 520
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 Q-PYEDVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 572
Query: 622 TLNAALEAEKLYWKHRRMLPKNNHREGVRGR 652
+ +++++ +++P+ + R R
Sbjct: 573 MVRDYGKSKEIAEHFEQVIPEIASQSSSRER 603
>gi|419707448|ref|ZP_14234932.1| Putative exoribonuclease [Streptococcus salivarius PS4]
gi|383282794|gb|EIC80774.1| Putative exoribonuclease [Streptococcus salivarius PS4]
Length = 817
Score = 228 bits (582), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 230/440 (52%), Gaps = 35/440 (7%)
Query: 188 PDSIKKRLEEGDATIEMELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYEN 246
P IKK D T E++ I+++ N + V + G G+ + +L E+
Sbjct: 167 PIYIKKEPVALDGT---EIIKVDIEKYPNRHYDYFVGSVRDIIGHQGDTGIDVLEVL-ES 222
Query: 247 AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 306
S F + ++ VP QE+L+ R DLR FTID + A DLDDA+ I+RL +
Sbjct: 223 MDIVSEFPEDVMAEAEAVPDAPSQEDLVGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPN 282
Query: 307 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 366
G +GVHIADVSY+V G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDR
Sbjct: 283 GNFELGVHIADVSYYVTEGSALNREAVARGTSVYVTDRVVPMLPERLSNGICSLNPNVDR 342
Query: 367 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY 426
L S ++ G VV+ I ++VI + +++Y D++ G P+
Sbjct: 343 LTQSAIMEITPKGKVVNHKICQSVINTTFRMTYSDVNDMLAGN-------------PEKI 389
Query: 427 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL 486
QF+ ++ S+ ++ E+ KIL+D R GAL + S+ L +E G P D V+ R
Sbjct: 390 EQFKP--IMDSVSAMAELHKILEDMRERRGALNFDTSEARILVNEKGMPVDIVVRERGTA 447
Query: 487 NFLFEEFMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 545
+ E FML AN+ AE A+A P + R H P KL+ F + S G+Q+ +++
Sbjct: 448 ERMIESFMLAANECVAEHFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGVQIKGTAN 505
Query: 546 GQFHQSLEQ--AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPV 603
L++ AR + K + ++++ R MQ A Y + + GHY LA
Sbjct: 506 KMDQLDLQEFMARVQGKPGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQY 555
Query: 604 YTHFTSPLRRYPDLVVHRTL 623
YTHFTSP+RRYPDL+VHR +
Sbjct: 556 YTHFTSPIRRYPDLLVHRMI 575
>gi|241950149|ref|XP_002417797.1| exosome complex exonuclease subunit, putative; ribosomal RNA
processing protein, putative [Candida dubliniensis CD36]
gi|223641135|emb|CAX45512.1| exosome complex exonuclease subunit, putative [Candida dubliniensis
CD36]
Length = 998
Score = 228 bits (582), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 163/475 (34%), Positives = 237/475 (49%), Gaps = 47/475 (9%)
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
PK PK+ + + + + +R + +D W S +P H + G
Sbjct: 432 PKLPKIRIRTRKAREYLGQR------------IVVVVDSWPVNSRYPNGHFVRALGEIES 479
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCV--PWEVPQ------EELLSRKDLRNFCIFT 286
E + A+L E+ + FS L CLP W VP +L R DLR+ + +
Sbjct: 480 AEAETEALLLEHDVEYRPFSKNVLDCLPQEGDNWVVPDITNTEDPQLQKRVDLRDKLVCS 539
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP D+DDAL ++L +G VGVHIADV++FV P T LD E R TSVY++ ++I
Sbjct: 540 IDPPNCVDIDDALHAKQLPNGNYEVGVHIADVTHFVKPNTPLDQEGASRGTSVYLVDKRI 599
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDII 406
MLP LL + SL P VDR AFS+ W+++ ++++ +++I+S SYE AQ I
Sbjct: 600 DMLPQLLGTNLCSLKPFVDRFAFSVIWEVDEDANIINVNYMKSIIKSRQAFSYEQAQLRI 659
Query: 407 DGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK-P 465
D P + D+ +S++ L ++SK LK KR GAL L + +
Sbjct: 660 DD--------------PS-----QQDDLTKSMRILLKLSKKLKQKRLDAGALNLASPEVK 700
Query: 466 VFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRK 525
V + E P + + + N L EEFML AN + A I A+P +A+LRRH AP
Sbjct: 701 VHMDSETSDPQEVEIKKLLETNSLVEEFMLFANISVARKIYDAYPQTAMLRRHAAPPATN 760
Query: 526 LREFEAFCS--KHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASY 582
+ K G+ + SS SL++ + D Y F+ L+ +TR M A Y
Sbjct: 761 FETLNDMLNVRKDGMSISLESSKALADSLDRCIDP-NDKY--FNTLVRIMSTRCMMAAEY 817
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHR 637
F SG + ++ HY LA +YTHFTSP+RRY D+V HR L A+ E L HR
Sbjct: 818 FPSGSYG-YPEFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIGYENLDLSHR 871
>gi|302828898|ref|XP_002946016.1| hypothetical protein VOLCADRAFT_55673 [Volvox carteri f.
nagariensis]
gi|300268831|gb|EFJ53011.1| hypothetical protein VOLCADRAFT_55673 [Volvox carteri f.
nagariensis]
Length = 932
Score = 228 bits (582), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 190/643 (29%), Positives = 291/643 (45%), Gaps = 142/643 (22%)
Query: 114 KRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPT 173
+RPTGRVV II+R+ R G G L + GG+ + P
Sbjct: 334 RRPTGRVVGIIKRNWRTRGYCGSLKPQRV--RSGGAAN----------------VLFVPV 375
Query: 174 HPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGG 233
+YP I+ + + D ++ +V ID W+ +S +P+ H +
Sbjct: 376 ERRYPM-----------IRIQTRQADTLMDKRIVVV-IDGWDADSAYPRGHYV------- 416
Query: 234 EVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELL--SRKDLRNFCIFTIDPST 291
+L EN I + F+P C+P +PW V +L +R DLR+ + ++DP
Sbjct: 417 --------LLIENDINTNPFTPAVHDCVPPLPWSVSPADLADPNRADLRHLVVASVDPPG 468
Query: 292 ATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPV 351
D+DDAL P TA+D+EA R+T+VY++QR+I MLP
Sbjct: 469 CKDIDDALH-----------------------PATAMDLEAAQRATTVYLVQRRIDMLPK 505
Query: 352 LLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFD 411
L+E++ SL V+RLAFS+ W+++ ++++ ++VI S L+Y AQ ID
Sbjct: 506 PLTEDICSLRCNVERLAFSVLWEVDEEANILNTTFMKSVISSRASLTYAEAQSRIDD--- 562
Query: 412 VESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD- 470
P + D+ S++++ +++KIL+ +R GAL+L + + F D
Sbjct: 563 -----------PAMN-----DDLTVSLRTMNKLAKILRARRAAAGALQLASPEVKFTIDT 606
Query: 471 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFE 530
E P D + + N + EE MLLAN AE I R FP +LLRRH P R+
Sbjct: 607 ETHDPLDVGMYQVRETNQMVEEMMLLANVAVAEKILRHFPSCSLLRRHQTPPPRQFEPIL 666
Query: 531 AFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILIN-YATRPMQLASYFCSGDFK 589
+ G +D SSS SL+ A +++D F+ L+ TR M A YF SGD
Sbjct: 667 KAAAAAGFSIDISSSSALAASLDGA---VREDDPYFNKLVRIMTTRCMTQAQYFGSGDLA 723
Query: 590 DDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNNHREGV 649
+++ HY LA +YTHFTSP+RRY D+VVHR L AA+ E L R
Sbjct: 724 -PSEYHHYGLASALYTHFTSPIRRYADVVVHRLLGAAIGLEPLPDSAR------------ 770
Query: 650 RGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRNVKDAC 709
DKDA C+D L N R + A
Sbjct: 771 ----------DKDALRD-----------------CSDNL-------NKRHRNAQMAGRAS 796
Query: 710 VKLYMWILLKKKEVLLSEARVLALGPRFMTIYIEKLAIERRIY 752
V+L+ I K + V +++AR+ + + +++ K IE +Y
Sbjct: 797 VELHTLIFFKNRSV-VADARITKVKANGLVVFVPKYGIEGPVY 838
>gi|55822595|ref|YP_141036.1| exoribonuclease R [Streptococcus thermophilus CNRZ1066]
gi|55738580|gb|AAV62221.1| exoribonuclease R [Streptococcus thermophilus CNRZ1066]
Length = 817
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 231/434 (53%), Gaps = 33/434 (7%)
Query: 195 LEEGDATIE-MELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 252
+++G +E E++ I+++ N + V + G G+ + +L E+ S
Sbjct: 170 IKKGPVALEGTEIIKVDIEKYPNRHHDYFVGSVRDIIGHQGDAGIDVLEVL-ESMDIVSE 228
Query: 253 FSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
F + ++ VP QE+L+ R DLR FTID + A DLDDA+ I+RL +G +G
Sbjct: 229 FPEDVMAEAEAVPDAPSQEDLIGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPNGNYELG 288
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVSY+V G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDRL S
Sbjct: 289 VHIADVSYYVTEGSALNREAAARGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTLSAI 348
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
++ G V++ I ++VI++ +++Y DV N + G P+ QF+
Sbjct: 349 MEITPKGKVINHKICQSVIKTTFRMTYS----------DV---NEMLAGNPEKIEQFKP- 394
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE 492
++ S+ ++ E+ KIL+D R GAL + S+ L ++ G P D V+ R + E
Sbjct: 395 -IMDSVSAMAELHKILEDMRERRGALNFDTSEARILVNDKGMPVDIVVRERGTAERMIES 453
Query: 493 FMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 551
FML AN+ AE A+A P + R H P KL+ F + S G+Q+ +++
Sbjct: 454 FMLAANECVAEHFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGIQIKGTANKMDQLD 511
Query: 552 LEQ--AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
L+ AR + K + ++++ R MQ A Y + + GHY LA YTHFTS
Sbjct: 512 LQDFMARVQGKPGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQYYTHFTS 561
Query: 610 PLRRYPDLVVHRTL 623
P+RRYPDL+VHR +
Sbjct: 562 PIRRYPDLLVHRMI 575
>gi|322372549|ref|ZP_08047085.1| ribonuclease R [Streptococcus sp. C150]
gi|321277591|gb|EFX54660.1| ribonuclease R [Streptococcus sp. C150]
Length = 817
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 230/440 (52%), Gaps = 35/440 (7%)
Query: 188 PDSIKKRLEEGDATIEMELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYEN 246
P IKK D T E++ I+++ N + V + G G+ + +L E+
Sbjct: 167 PIYIKKEPVALDGT---EIIKVDIEKYPNRHYDYFVGSVRDIIGHQGDAGIDVLEVL-ES 222
Query: 247 AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 306
S F + ++ VP QE+L+ R DLR FTID + A DLDDA+ I+RL +
Sbjct: 223 MDIVSEFPEDVMAEAEAVPDAPSQEDLVGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPN 282
Query: 307 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 366
G +GVHIADVSY+V G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDR
Sbjct: 283 GNFELGVHIADVSYYVTEGSALNREAVARGTSVYVTDRVVPMLPERLSNGICSLNPNVDR 342
Query: 367 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY 426
L S ++ G VV+ I ++VI + +++Y D++ G P+
Sbjct: 343 LTQSAIMEITPKGKVVNHKICQSVINTTFRMTYSDVNDMLAGN-------------PEKI 389
Query: 427 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL 486
QF+ ++ S+ ++ E+ KIL+D R GAL + S+ L +E G P D V+ R
Sbjct: 390 EQFKP--IMDSVSAMAELHKILEDMRERRGALNFDTSEARILVNEKGMPVDIVVRERGTA 447
Query: 487 NFLFEEFMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 545
+ E FML AN+ AE A+A P + R H P KL+ F + S G+Q+ +++
Sbjct: 448 ERMIESFMLAANECVAEHFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGVQIKGTAN 505
Query: 546 GQFHQSLEQ--AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPV 603
L++ AR + K + ++++ R MQ A Y + + GHY LA
Sbjct: 506 KMDQLDLQEFMARVQGKPGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQY 555
Query: 604 YTHFTSPLRRYPDLVVHRTL 623
YTHFTSP+RRYPDL+VHR +
Sbjct: 556 YTHFTSPIRRYPDLLVHRMI 575
>gi|55820704|ref|YP_139146.1| exoribonuclease R [Streptococcus thermophilus LMG 18311]
gi|386086316|ref|YP_006002190.1| Exoribonuclease R [Streptococcus thermophilus ND03]
gi|387909409|ref|YP_006339715.1| exoribonuclease R [Streptococcus thermophilus MN-ZLW-002]
gi|55736689|gb|AAV60331.1| exoribonuclease R [Streptococcus thermophilus LMG 18311]
gi|312278029|gb|ADQ62686.1| Exoribonuclease R [Streptococcus thermophilus ND03]
gi|387574344|gb|AFJ83050.1| exoribonuclease R [Streptococcus thermophilus MN-ZLW-002]
Length = 817
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 231/434 (53%), Gaps = 33/434 (7%)
Query: 195 LEEGDATIE-MELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 252
+++G +E E++ I+++ N + V + G G+ + +L E+ S
Sbjct: 170 IKKGPVALEGTEIIKVDIEKYPNRHHDYFVGSVRDIIGHQGDAGIDVLEVL-ESMDIVSE 228
Query: 253 FSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
F + ++ VP QE+L+ R DLR FTID + A DLDDA+ I+RL +G +G
Sbjct: 229 FPEDVMAEAEAVPDAPSQEDLIGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPNGNYELG 288
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVSY+V G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDRL S
Sbjct: 289 VHIADVSYYVTEGSALNREAAARGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTLSAI 348
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
++ G V++ I ++VI++ +++Y DV N + G P+ QF+
Sbjct: 349 MEITPKGKVINHKICQSVIKTTFRMTYS----------DV---NEMLAGNPEKIEQFKP- 394
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE 492
++ S+ ++ E+ KIL+D R GAL + S+ L ++ G P D V+ R + E
Sbjct: 395 -IMDSVSAMAELHKILEDMRERRGALNFDTSEARILVNDKGMPVDIVVRERGTAERMIES 453
Query: 493 FMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 551
FML AN+ AE A+A P + R H P KL+ F + S G+Q+ +++
Sbjct: 454 FMLAANECVAEHFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGIQIKGTANKMDQLD 511
Query: 552 LEQ--AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
L+ AR + K + ++++ R MQ A Y + + GHY LA YTHFTS
Sbjct: 512 LQDFMARVQGKPGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQYYTHFTS 561
Query: 610 PLRRYPDLVVHRTL 623
P+RRYPDL+VHR +
Sbjct: 562 PIRRYPDLLVHRMI 575
>gi|345323880|ref|XP_001511394.2| PREDICTED: DIS3-like exonuclease 1 [Ornithorhynchus anatinus]
Length = 1133
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 153/433 (35%), Positives = 226/433 (52%), Gaps = 51/433 (11%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC--- 263
V R+D W S +P H + V GR G++E +I IL EN+I S F L +P
Sbjct: 369 VVVRVDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVENSISVSPFPEAQLGEMPVDTP 428
Query: 264 -VPWEVPQEELLSRKDLR-NFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYF 321
PW V EE R DLR +F+IDP D+DDALS+ L +G +GVHIADVS+F
Sbjct: 429 EKPWRVSPEEERVRADLRKTHLVFSIDPKDCEDVDDALSVRTLENGNLELGVHIADVSHF 488
Query: 322 VLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDV 381
V P + D+EA+ R+T+ Y+ R+ MLP +LS + SL GVDR A S+ W+L+ A
Sbjct: 489 VPPNSYTDMEAKTRATTYYLADRRYDMLPSILSSNLCSLLGGVDRYAVSVTWELDRASYE 548
Query: 382 VDR-WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYG------QFEWSDV 434
+ R GRT++RS KLSYE AQ ++DG + + P+L G Q ++
Sbjct: 549 IQRVRFGRTIVRSAYKLSYETAQTLLDG-------DPAADAVPELRGLDEEMRQRRLEEL 601
Query: 435 VRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFM 494
R++++L +V++ + +R GAL LE + D D + +++ E M
Sbjct: 602 GRAVRTLTDVARRARARRAGRGALELEGVEVRVQLDRDSNIRDLIPKQPLEVHETVAECM 661
Query: 495 LLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ 554
+LAN A+ I + FP AL S+ SL++
Sbjct: 662 ILANHWVAKKIWKTFPHQAL-----------------------------SNKTLADSLDK 692
Query: 555 AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 614
A + +D ++ +L + AT+ M A YF +G + ++ ++ HY LA YTHFTSP+RRY
Sbjct: 693 AEDP--EDPLVNRMLRSMATQAMSNALYFSTGSYSEE-EFHHYGLALDKYTHFTSPIRRY 749
Query: 615 PDLVVHRTLNAAL 627
D+VVHR L AA+
Sbjct: 750 SDIVVHRLLMAAI 762
>gi|386344317|ref|YP_006040481.1| exoribonuclease R [Streptococcus thermophilus JIM 8232]
gi|339277778|emb|CCC19526.1| exoribonuclease R [Streptococcus thermophilus JIM 8232]
Length = 817
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 231/434 (53%), Gaps = 33/434 (7%)
Query: 195 LEEGDATIE-MELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 252
+++G +E E++ I+++ N + V + G G+ + +L E+ S
Sbjct: 170 IKKGPVALEGTEIIKVDIEKYPNRHHDYFVGSVRDIIGHQGDAGIDVLEVL-ESMDIVSE 228
Query: 253 FSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
F + ++ VP QE+L+ R DLR FTID + A DLDDA+ I+RL +G +G
Sbjct: 229 FPEDVMAEAEAVPDAPSQEDLIGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPNGNYELG 288
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVSY+V G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDRL S
Sbjct: 289 VHIADVSYYVTEGSALNREAAARGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTLSAI 348
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
++ G V++ I ++VI++ +++Y DV N + G P+ QF+
Sbjct: 349 MEITPKGKVINHKICQSVIKTTFRMTYS----------DV---NEMLAGNPEKIEQFKP- 394
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE 492
++ S+ ++ E+ KIL+D R GAL + S+ L ++ G P D V+ R + E
Sbjct: 395 -IMDSVSAMAELHKILEDMRERRGALNFDTSEARILVNDKGMPVDIVVRERGTAERMIES 453
Query: 493 FMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 551
FML AN+ AE A+A P + R H P KL+ F + S G+Q+ +++
Sbjct: 454 FMLAANECVAEHFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGIQIKGTANKMDQLD 511
Query: 552 LEQ--AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
L+ AR + K + ++++ R MQ A Y + + GHY LA YTHFTS
Sbjct: 512 LQDFMARVQGKPGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQYYTHFTS 561
Query: 610 PLRRYPDLVVHRTL 623
P+RRYPDL+VHR +
Sbjct: 562 PIRRYPDLLVHRMI 575
>gi|403068103|ref|ZP_10909435.1| ribonulease R [Oceanobacillus sp. Ndiop]
Length = 736
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 158/514 (30%), Positives = 254/514 (49%), Gaps = 62/514 (12%)
Query: 115 RPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKNRSSLSVPDREYIQLTPTH 174
RP G+V+ I+ER+ + +VG N+ F + K +P+ +I H
Sbjct: 120 RPEGKVIRILERAVIQ--VVGTFEDNRSFGFVIADDK---------RIPNDIFIPKGAAH 168
Query: 175 PKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGE 234
+ V AR+ ++ E + ++H+ G +
Sbjct: 169 -------------------------GAVSGHKVIARLTKYPEGRKSAEGEIIHILGHKND 203
Query: 235 VEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATD 294
I +I+Y++ I F + L V + +EEL R+D+R+ + TID + A D
Sbjct: 204 PGIDILSIIYKHGITID-FPEDVLQQATSVSETIAEEELQGRRDIRDEVVVTIDGADAKD 262
Query: 295 LDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLS 354
LDDA+++++L +G ++GV+IADVSY+V G+ +D EA R TSVY++ R IPM+P LS
Sbjct: 263 LDDAVTVKKLDNGNYKLGVYIADVSYYVEEGSPIDNEAFERGTSVYLVDRVIPMIPHRLS 322
Query: 355 EEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVES 414
+ SLNP VDRL ++N AG VV+ I ++VI++ +++Y I+ V+
Sbjct: 323 NGICSLNPKVDRLTLGCEMEINPAGQVVNHEIFQSVIKTTERMTYSDVNKIL-----VDK 377
Query: 415 SNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGT 474
+ E + L FE + ++++IL++KRF GA+ + + L D+ G
Sbjct: 378 DEEVLEKYKALVPMFE---------QMEKLAEILRNKRFGRGAIDFDFKEAKVLVDDTGK 428
Query: 475 PYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRR-HPAPNMRKLREFEAFC 533
P D V+ R L EEFML AN+T AE + D + R H P+ KL +F F
Sbjct: 429 PTDVVVRERGVAERLIEEFMLAANETVAEHF--HWMDVPFIHRIHEDPDEGKLEKFFDFL 486
Query: 534 SKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTD 593
+ G+ + +++ Q+L++ E +K + I+ R M+ A Y G
Sbjct: 487 AGLGISVKGTANEVHPQALQKVLESIKGEPEEM-IVSKLMLRSMKQAKYDPQG------- 538
Query: 594 WGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
GH+ LA YTHFTSP+RRYPDL+VHR + L
Sbjct: 539 IGHFGLATEFYTHFTSPIRRYPDLIVHRLIRTYL 572
>gi|307706472|ref|ZP_07643281.1| ribonuclease R [Streptococcus mitis SK321]
gi|307618182|gb|EFN97340.1| ribonuclease R [Streptococcus mitis SK321]
Length = 784
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 263/526 (50%), Gaps = 48/526 (9%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DKEKRQ-------------EYQKIVPSIELMAK 402
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ + L++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHETLENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGIAERMIESFMLMANETVAE 462
Query: 504 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
++ P + R H P K+++F + S GL++ ++S ++L+ +K +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVKGE 520
Query: 563 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 622 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 673
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGSSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 674 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDAC 709
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEKSGT 677
>gi|418977627|ref|ZP_13525441.1| ribonuclease R [Streptococcus mitis SK575]
gi|383349595|gb|EID27524.1| ribonuclease R [Streptococcus mitis SK575]
Length = 784
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 264/526 (50%), Gaps = 48/526 (9%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRQ-------------EYKKIVPSIELMAK 402
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ +IL++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHEILENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGVAERMIESFMLMANETVAE 462
Query: 504 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 563 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 622 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 673
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 674 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDAC 709
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEKSGT 677
>gi|84999110|ref|XP_954276.1| exosome complex exonuclease rrp44 [Theileria annulata]
gi|65305274|emb|CAI73599.1| exosome complex exonuclease rrp44, putative [Theileria annulata]
Length = 955
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 152/453 (33%), Positives = 228/453 (50%), Gaps = 50/453 (11%)
Query: 202 IEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCL 261
+E + +D W+ S P H + G + + IL E+ + FS +S L
Sbjct: 412 LENNRIVVEVDSWDRFSKRPNGHWTEILGPIDDRNVESTVILREHQVITEDFSLQSYRHL 471
Query: 262 PCVP-----------------WEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERL 304
+ ++ E L R D R+ +F++DP D+DDAL +RL
Sbjct: 472 GLITSSLVDTSSTEKDEDKSDIKITPELLGGRVDYRDEVVFSVDPPGCKDIDDALGCKRL 531
Query: 305 SDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGV 364
S+G V VHIADV+YFV G+ LD EA R T+VY++ R+ MLP LL+ + SL V
Sbjct: 532 SNGNFEVSVHIADVTYFVPEGSNLDKEASERCTTVYLVDRRTDMLPKLLTTNLCSLMSDV 591
Query: 365 DRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQ 424
+RL FS++W+++ G ++ ++VI+S L+Y+ AQ++ID SSN
Sbjct: 592 NRLTFSVYWEMDMNGVILATKFSKSVIKSRRSLTYQQAQEMIDS-----SSN-------- 638
Query: 425 LYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGRE 484
+V S+++L +SKIL+ +R GA+ LE+S+ F FD VL+
Sbjct: 639 -------DEVSVSLRNLNNLSKILRKQRIERGAVELESSEVKFEFD-----MSKVLNLES 686
Query: 485 ----DLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGL-Q 539
+ N + EEFMLLAN + A I FP +LLR HP P KL E + +
Sbjct: 687 YKTYETNQMVEEFMLLANISVATKIFERFPKCSLLRVHPPPVEEKLNELNRTLQQQNITS 746
Query: 540 LDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYAL 599
+S Q ++SLE + + D + ++ TR M A Y S D +D ++ HY L
Sbjct: 747 FKYGNSKQLNESLEIVKNEKNDKFTTATKIL--TTRTMSQALYRNSNDLDED-EFKHYGL 803
Query: 600 AFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKL 632
YTHFTSP+RRY D++VHR L +AL+ L
Sbjct: 804 CCEYYTHFTSPIRRYADVIVHRLLASALDLAPL 836
>gi|423070304|ref|ZP_17059080.1| ribonuclease R [Streptococcus intermedius F0413]
gi|355366625|gb|EHG14343.1| ribonuclease R [Streptococcus intermedius F0413]
Length = 779
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 167/527 (31%), Positives = 256/527 (48%), Gaps = 48/527 (9%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A +L V G + P I+ + + E+ S F L
Sbjct: 178 EILKVEIDKYPTKKHDFFVATILDVVGHKDD--PGIDVLEVLESMDIVSEFPERVLKEAS 235
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
+P +++ R DLRN FTID + A DLDDA+ I++LS+G +GVHIADVSY+V
Sbjct: 236 AIPDMPSKKDFEGRLDLRNEITFTIDGADAKDLDDAVHIKKLSNGHFELGVHIADVSYYV 295
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV
Sbjct: 296 QEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDQKGRVV 355
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
+ +TVI++ +++Y DII G D E + +V SI+ +
Sbjct: 356 KHTVTQTVIKTTFRMTYSDVNDIITG--DKEKRTA-------------FKTIVPSIEQMT 400
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
E+ IL+ RF GAL + + L ++ G P D +L R + E FML+AN+T A
Sbjct: 401 ELHAILETMRFKRGALNFDTKEAKILVNKTGRPVDIILRQRGVAERMIESFMLVANETVA 460
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E AR P L R H P K+++F + S G+++ ++ QS Q K
Sbjct: 461 EHFARLNLP--FLYRIHEEPKAEKVQKFIDYASTFGVRV-YGTANSISQSALQDIMKAVH 517
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
++L R MQ A Y + ++GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 518 GQPYEEVLSMMLLRSMQQARY-------SEHNYGHYGLAAGFYTHFTSPIRRYPDLLVHR 570
Query: 622 TLNAALEAEKLYWKHRRMLP------KNNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 673
+ ++++ +++P + R + + E G E +
Sbjct: 571 MVRDYGRSKEIAEHFEQVIPDIASQSSSRERRAIEAEREVEAMKKAEFMEEFVGEEFDGI 630
Query: 674 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDACV 710
+ +K+G+ + L++VA H N+R L + K V
Sbjct: 631 VSSVVKFGLFVELSNTVEGLIHVANLPEFFHYNERNLTLQGEKSGVV 677
>gi|422848230|ref|ZP_16894906.1| ribonuclease R [Streptococcus sanguinis SK115]
gi|325690762|gb|EGD32763.1| ribonuclease R [Streptococcus sanguinis SK115]
Length = 782
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 243/454 (53%), Gaps = 36/454 (7%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A ++ V G + P I+ + + E+ S F + L
Sbjct: 180 EVLKVAIDKYPTKKHDFFVASLVDVVGHVND--PGIDVLEVLESMDIVSEFPEKVLEEAE 237
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
VP + +L R DLR IFTID + A DLDDA+ I+RL +G +GVHIADVS +V
Sbjct: 238 RVPDAPTESDLEGRLDLREEVIFTIDGADAKDLDDAVHIKRLKNGNFELGVHIADVSNYV 297
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S ++++ G VV
Sbjct: 298 KEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDAKGRVV 357
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
I +TVI++ +++Y DII G + E + ++ +V SI S+
Sbjct: 358 KHIITQTVIKTTFRMTYSDVNDIIAG--NQEKAE-------------QFKAIVPSIDSMV 402
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
++ +IL+ RF GAL + ++ + ++ G P D VL R + E FML+AN+T A
Sbjct: 403 QLHEILESMRFKRGALNFDTNEAKIMVNKEGRPVDIVLRQRGIAERMIESFMLVANETVA 462
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E A+ P + R H P K+++F + S G+++ +S Q+L+ E +KD
Sbjct: 463 EHFAKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGIRIYGMASSMSQQALQDIMEAVKD 520
Query: 562 ---DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLV 618
+ VL +L+ R MQ A Y + + GHY LA YTHFTSP+RRYPDL+
Sbjct: 521 QPYEEVLSMMLL----RSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLL 569
Query: 619 VHRTLNAALEAEKLYWKHRRMLPKNNHREGVRGR 652
VHR + +++++ +++P+ + R R
Sbjct: 570 VHRMVQDYGKSKEIAEHFEQVIPEIASQSSSRER 603
>gi|421452013|ref|ZP_15901374.1| Exoribonuclease II [Streptococcus salivarius K12]
gi|400182444|gb|EJO16706.1| Exoribonuclease II [Streptococcus salivarius K12]
Length = 817
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 224/423 (52%), Gaps = 32/423 (7%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ I+++ N + V + G G+ + +L E+ S F + ++
Sbjct: 181 EIIKVDIEKYPNRHYDYFVGSVRDIIGHQGDAGIDVLEVL-ESMDIVSEFPEDVMAEAEA 239
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP QE+LL R DLR FTID + A DLDDA+ I+RL +G +GVHIADVSY+V
Sbjct: 240 VPDAPSQEDLLGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPNGNFELGVHIADVSYYVT 299
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDRL S ++ G VV+
Sbjct: 300 EGSALNREAVARGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEITPKGKVVN 359
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I ++VI + +++Y +++ G P+ QF+ ++ S+ ++ E
Sbjct: 360 HKICQSVINTTFRMTYSDVNEMLAGN-------------PEKIEQFKP--IMDSVSAMAE 404
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ KIL+D R GAL + S+ L +E G P D V+ R + E FML AN+ AE
Sbjct: 405 LHKILEDMRERRGALNFDTSEARILVNEKGMPVDIVVRERGTAERMIESFMLAANECVAE 464
Query: 504 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ--AREKLK 560
A+A P + R H P KL+ F + S G+Q+ +++ L++ AR + K
Sbjct: 465 HFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGVQIKGTANKMDQLDLQEFMARVQGK 522
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
+ ++++ R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VH
Sbjct: 523 PGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQYYTHFTSPIRRYPDLLVH 572
Query: 621 RTL 623
R +
Sbjct: 573 RMI 575
>gi|268316759|ref|YP_003290478.1| ribonuclease R [Rhodothermus marinus DSM 4252]
gi|262334293|gb|ACY48090.1| ribonuclease R [Rhodothermus marinus DSM 4252]
Length = 751
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 158/432 (36%), Positives = 219/432 (50%), Gaps = 41/432 (9%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V ID +++ P+ VL V G + Q+ A+ + +GF +L +P
Sbjct: 201 VVVSIDRFDDPKASPEGRVLEVLGPASDPRVQVLALALSKDVR-TGFPEAALKEAERIPD 259
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+P+ E R DLR+ +FTIDPS A D DDAL + RL +G VGVHIADVSY+V PG+
Sbjct: 260 TIPEREYRRRLDLRDRAVFTIDPSDAKDFDDALHLRRLPNGHIEVGVHIADVSYYVRPGS 319
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
ALD EA R TSVY++ R IPMLP LS +V SL PG D+L +S+ +L + VV I
Sbjct: 320 ALDEEAYQRGTSVYLVDRVIPMLPEKLSNQVCSLRPGEDKLTYSVLMELTPSARVVRYQI 379
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
TVI S + +YE AQ IIDG + + L E ++ +E+++
Sbjct: 380 RETVIHSRQRFTYEEAQAIIDG-----ADHPLAE----------------PVRLAHELAQ 418
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
L+ R GA+ + + DE G P R + L EEFMLLAN+ AE I
Sbjct: 419 KLRKARMEAGAIDFDLPEVKVELDEAGNPIRIYRKERLAAHQLIEEFMLLANRLVAETIG 478
Query: 507 -RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD-----TSSSGQFHQSLEQAREKLK 560
R + R H P+ K+R+ + G L+ T SS ++ L+ + +
Sbjct: 479 KRTEAPPFVYRIHDRPDAEKIRQLAQYVRVFGYHLELTEDGTVSSKALNELLQHVKGTPE 538
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
+ ++ A R M A Y + GHY LAF YTHFTSP+RRYPDL+VH
Sbjct: 539 E-----PVIEEAALRAMAKARYSTQ-------NIGHYGLAFDFYTHFTSPIRRYPDLMVH 586
Query: 621 RTLNAAL-EAEK 631
R L L +AEK
Sbjct: 587 RLLKQYLKKAEK 598
>gi|374290343|ref|YP_005037396.1| ribonuclease R [Blattabacterium sp. (Cryptocercus punctulatus) str.
Cpu]
gi|358377135|gb|AEU09323.1| ribonuclease R [Blattabacterium sp. (Cryptocercus punctulatus) str.
Cpu]
Length = 659
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 138/428 (32%), Positives = 214/428 (50%), Gaps = 38/428 (8%)
Query: 205 ELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCV 264
E V RI W + P ++ VFG+ GE +I ++L E + FS E +
Sbjct: 133 EKVLVRIITWPKNLKNPLGEIIKVFGQSGEYTTEIYSLLEEYGLSYE-FSKEVEKEAKKI 191
Query: 265 PWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLP 324
++ + L R+D+RN FTIDP A D DDALSI +L+ +G+HIADV+Y++
Sbjct: 192 VFKKNLDNNLRRRDMRNINTFTIDPFDAKDFDDALSIRKLNYNTWEIGIHIADVTYYIKE 251
Query: 325 GTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR 384
G+ LD EA RS S+Y + + IPMLP +LS ++ SL+P D+L+FS ++++S G ++
Sbjct: 252 GSLLDKEAYTRSNSIYFIGKSIPMLPKILSNDICSLHPEKDKLSFSSIFNVDSKGKILKS 311
Query: 385 WIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEV 444
W G+T+IRS + +YE Q II+ K G+ LY +L+
Sbjct: 312 WFGKTIIRSNRRFTYEEVQKIIEKK--------RGDFHKDLY-------------TLFTF 350
Query: 445 SKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEV 504
SKI R +G++ L+ + DE PY L + + L EEFMLLAN+ +E
Sbjct: 351 SKIFTKNRLKNGSIYLDKVEIKIHLDEKKNPYKLDLEKNNEAHRLIEEFMLLANRKISEF 410
Query: 505 IARAFP-----DSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKL 559
++ + + R H P+ +K+ + G LD + + L + +
Sbjct: 411 VSLNLDGNPSNKTYIYRIHDKPDFQKIFILKKIIEPLGYSLDLKNLKKSLNGLLKNIQGK 470
Query: 560 KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVV 619
+ +++ N R M A Y + GHY L+F Y+HFTSP+RRY D++
Sbjct: 471 SEQ----NMIENLILRSMSKAKY-------STNNIGHYGLSFIYYSHFTSPIRRYSDIIA 519
Query: 620 HRTLNAAL 627
HR LN L
Sbjct: 520 HRLLNYYL 527
>gi|260910861|ref|ZP_05917505.1| ribonuclease R [Prevotella sp. oral taxon 472 str. F0295]
gi|260635012|gb|EEX53058.1| ribonuclease R [Prevotella sp. oral taxon 472 str. F0295]
Length = 735
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 151/442 (34%), Positives = 236/442 (53%), Gaps = 24/442 (5%)
Query: 191 IKKRLEEGDATIEMELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAIC 249
+ KR +G T + +V +I +W + E V+ V G GE + +++AIL + +
Sbjct: 175 VPKRKLKGGKTGDKAVV--KITQWPDAEHKNIMGEVIDVLGPTGENDAEMHAILAQYGLP 232
Query: 250 CSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGIS 309
+ + + + E+ Q++ R+D RN TIDP A D DDALSI L G+
Sbjct: 233 YT-YPKAAEEAAERISAEITQQDYDEREDFRNVFTCTIDPRDAKDFDDALSIRMLDKGLW 291
Query: 310 RVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAF 369
+VGVHIADVS++V G+ +D EA R+TSVY++ R IPMLP L + SL P ++LA+
Sbjct: 292 QVGVHIADVSHYVTEGSIIDKEAMKRATSVYLVDRTIPMLPERLCNFICSLRPDEEKLAY 351
Query: 370 SIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQF 429
S+ ++++ D+ I TVI+S + +YE Q +++ D ++ GE P
Sbjct: 352 SVIFNMDENADIKTYRIVHTVIKSDRRYAYEEVQQLLE---DNGVADGTGEPAPPAPKGG 408
Query: 430 EWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFL 489
+ ++ L +++K L++KR +GA++ + + F DE G P + +D N L
Sbjct: 409 YKGENADNLIMLDKLAKKLREKRLKNGAVKFDREELHFDVDEQGKPIRAYFKRSKDANKL 468
Query: 490 FEEFMLLANKTAAEVIARA----FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 545
EEFMLLAN+T AE + R P + R H P+ +KL F K G +L T+S+
Sbjct: 469 IEEFMLLANRTVAESVGRPKDGRAPKTLPYRVHDNPDPQKLETLREFIMKFGYKLKTTST 528
Query: 546 -GQFHQSLEQAREKL--KDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFP 602
G+ +SL + +++ K + L + + A R M A Y + GH+ LAF
Sbjct: 529 KGETSRSLNKLMDEVAGKREQNLIETI---ALRAMMKAKYSIH-------NIGHFGLAFD 578
Query: 603 VYTHFTSPLRRYPDLVVHRTLN 624
YTHFTSP+RRYPD +VHR L
Sbjct: 579 YYTHFTSPIRRYPDTMVHRLLT 600
>gi|418018209|ref|ZP_12657765.1| exoribonuclease R [Streptococcus salivarius M18]
gi|345527058|gb|EGX30369.1| exoribonuclease R [Streptococcus salivarius M18]
Length = 817
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 154/440 (35%), Positives = 230/440 (52%), Gaps = 35/440 (7%)
Query: 188 PDSIKKRLEEGDATIEMELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYEN 246
P IKK D T E++ I+++ N + V + G G+ + +L E+
Sbjct: 167 PIYIKKEPVALDGT---EIIKVDIEKYPNRHYDYFVGSVRDIIGHQGDAGIDVLEVL-ES 222
Query: 247 AICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSD 306
S F + ++ VP QE+LL R DLR FTID + A DLDDA+ I+RL +
Sbjct: 223 MDIVSEFPEDVMAEAEAVPDAPSQEDLLGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPN 282
Query: 307 GISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDR 366
G +GVHIADVSY+V G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDR
Sbjct: 283 GNFELGVHIADVSYYVTEGSALNREAVARGTSVYVTDRVVPMLPERLSNGICSLNPNVDR 342
Query: 367 LAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLY 426
L S ++ G VV+ I ++VI + +++Y +++ G P+
Sbjct: 343 LTQSAIMEITPKGKVVNHKICQSVINTTFRMTYSDVNEMLAGN-------------PEKI 389
Query: 427 GQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDL 486
QF+ ++ S+ ++ E+ KIL+D R GAL + S+ L +E G P D V+ R
Sbjct: 390 EQFKP--IMESVSAMAELHKILEDMRERRGALNFDTSEARILVNEKGMPVDIVVRERGTA 447
Query: 487 NFLFEEFMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSS 545
+ E FML AN+ AE A+A P + R H P KL+ F + S G+Q+ +++
Sbjct: 448 ERMIESFMLAANECVAEHFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGVQIKGTAN 505
Query: 546 GQFHQSLEQ--AREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPV 603
L++ A+ + K + ++++ R MQ A Y + + GHY LA
Sbjct: 506 KMDQLDLQEFMAKVQGKPGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQY 555
Query: 604 YTHFTSPLRRYPDLVVHRTL 623
YTHFTSP+RRYPDL+VHR +
Sbjct: 556 YTHFTSPIRRYPDLLVHRMI 575
>gi|212550560|ref|YP_002308877.1| ribonuclease R [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212548798|dbj|BAG83466.1| putative ribonuclease R [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 586
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/378 (34%), Positives = 203/378 (53%), Gaps = 46/378 (12%)
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
+P + E+ +R+D R FTIDP A D DDALSI++LS+ +GVHIADV++++
Sbjct: 111 IPNHITLTEISNREDFRETLTFTIDPQNAKDFDDALSIKKLSNNFYEIGVHIADVTHYIK 170
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
P +++D EA R TS+Y++ + IPMLP L EV SL P D+L FS+ ++++ + +
Sbjct: 171 PDSSIDKEALKRGTSIYLVDKVIPMLPESLCNEVCSLRPNEDKLCFSVIFEMDGKAKIHN 230
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I RT+IRS + +YE AQ+II+ F +E + S+ +L
Sbjct: 231 YRIRRTIIRSDHRFTYEEAQEIIERSFAT---------------NYEDCSLNSSVFTLNC 275
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
++KIL++KRF++G++ + F D G P D L + N L EEFMLLANKT AE
Sbjct: 276 LAKILREKRFSNGSIDFVQREIQFDLDREGNPLDIYLKKNNEANQLVEEFMLLANKTIAE 335
Query: 504 VIA------RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD--------TSSSGQFH 549
++ RA P + R H P++ K++ + G +L+ + +
Sbjct: 336 IVGKVPKNKRAKP--FVYRVHGLPDIEKIKNLKQLVRSFGYKLNIKRINNETSKNISSLF 393
Query: 550 QSLEQAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
+ ++ RE+ +++ A R M+ A Y + GHY LAF YTHFTS
Sbjct: 394 KQVQGTREQ--------NLIETIALRTMEKAIYTTE-------NVGHYGLAFKYYTHFTS 438
Query: 610 PLRRYPDLVVHRTLNAAL 627
P+RRYPD++VHR L L
Sbjct: 439 PIRRYPDMIVHRLLEKYL 456
>gi|325299554|ref|YP_004259471.1| ribonuclease R [Bacteroides salanitronis DSM 18170]
gi|324319107|gb|ADY36998.1| ribonuclease R [Bacteroides salanitronis DSM 18170]
Length = 715
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 176/542 (32%), Positives = 253/542 (46%), Gaps = 89/542 (16%)
Query: 97 GMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN 156
MN A+ + K P G V+ I+ER+ + VG L V + + +
Sbjct: 118 AMNGDRVRVALCARRKRKEPEGEVIEILERA--KTTFVGTLKVTKNYAF----------- 164
Query: 157 RSSLSVPDREYIQLTPTHPKYPKMVVLVKDL--PDSIKKRLEEGDATIEMELVAARIDEW 214
LT + L D+ P K ++GD + RI EW
Sbjct: 165 ------------LLTESS-------TLANDIFIPKEKLKGGKDGDKAV------VRITEW 199
Query: 215 NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESL-SCLPCVPWEVPQEEL 273
+E+ P V+ V G+ G+ +++AIL E + + P S+ + + E+ E+
Sbjct: 200 PDEAKNPFGEVVDVLGKAGDNNTEMHAILAEYGLPYT--YPASVEAAAEKLSAEITPEDY 257
Query: 274 LSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQ 333
R+D R FTIDP A D DDALSI L G+ VGVHIADVS++V G A+D EA
Sbjct: 258 AEREDFRTVTTFTIDPKDAKDFDDALSIRPLKPGLWEVGVHIADVSHYVKEGGAIDKEAV 317
Query: 334 VRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRS 393
R+TSVY++ R IPMLP L + SL P ++LA+S+ + LN +V D I TVI+S
Sbjct: 318 KRATSVYLVDRTIPMLPERLCNFICSLRPNEEKLAYSVIFTLNDNAEVKDYRIRHTVIKS 377
Query: 394 CCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRF 453
+ +YE AQ II+ G G D I L +++ L+ +R
Sbjct: 378 DRRFTYEEAQAIIE----------TGTG-----------DYTYEILELNRLAQQLRARRM 416
Query: 454 TDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA------- 506
G++ + + F DE G P ++ N L EEFMLLAN+T AE I
Sbjct: 417 AAGSIDFDRVEVKFEIDEKGKPLSVYFKQSKEANKLIEEFMLLANRTVAEHIGKVPKNKK 476
Query: 507 -RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSG-QFHQSLEQAREKL--KDD 562
+ FP R H P+ KL F ++ G ++ T S + +SL + + K +
Sbjct: 477 PKVFP----YRIHDLPDPMKLENLNQFIARFGYKIRTGGSKTEVSRSLNRLLSDVSGKKE 532
Query: 563 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
L + + + R MQ A Y + GHY LAF YTHFTSP+RRYPDL+VHR
Sbjct: 533 QNLIETV---SLRAMQKARYSIH-------NIGHYGLAFDYYTHFTSPIRRYPDLMVHRL 582
Query: 623 LN 624
L
Sbjct: 583 LT 584
>gi|374338492|ref|YP_005095206.1| 3'-to-5' exoribonuclease RNase R 1 [Streptococcus macedonicus
ACA-DC 198]
gi|372284606|emb|CCF02894.1| 3'-to-5' exoribonuclease RNase R 1 [Streptococcus macedonicus
ACA-DC 198]
Length = 781
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 223/421 (52%), Gaps = 28/421 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ + HV + G G+V + +L E+ S F + ++
Sbjct: 181 EIIKVDIDKYPTRGHDYFVGHVRDIVGHQGDVGIDVLEVL-ESMDIKSEFPEDVMAEANA 239
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP +++++ R DLRN FTID + A DLDDA+ I+ L++G +GVHIADVSY+V
Sbjct: 240 VPDAPSEKDMIGRVDLRNEITFTIDGADAKDLDDAVHIKLLNNGNFELGVHIADVSYYVT 299
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
+AL+ EA R TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 300 EDSALNREAVARGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTLSCLMEIDRNGHVVN 359
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I ++VI++ +++Y DII G +L Q++ +V SI +
Sbjct: 360 HQICQSVIKTTFRMTYSDVNDIIAGD-------------EELIEQYQP--IVDSIHHMTA 404
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ IL+ R GAL + S+ + ++ G P D VL R + E FML AN+T AE
Sbjct: 405 LHNILETMRVRRGALNFDTSEAKIIVNDKGMPVDIVLRQRGIAERMIESFMLAANETVAE 464
Query: 504 VIA-RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
A R P + R H P KL++F + S G+Q+ +++ Q+L+ EK++
Sbjct: 465 HFAKRKLP--FIYRIHEEPKAEKLQKFLDYASIFGVQIHGTANKITQQALQDFMEKVEGK 522
Query: 563 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
++L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 523 PGA-EVLNMMLLRSMQQARY-------SEHNHGHYGLAAEYYTHFTSPIRRYPDLLVHRM 574
Query: 623 L 623
+
Sbjct: 575 I 575
>gi|451999099|gb|EMD91562.1| hypothetical protein COCHEDRAFT_1224675 [Cochliobolus heterostrophus
C5]
Length = 1360
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 155/525 (29%), Positives = 252/525 (48%), Gaps = 42/525 (8%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDRE----YIQ 169
G +V++IER + G +G L +Q K + + A++ + + P+R+ +
Sbjct: 576 AGHIVAVIERVAGQMFSGSLGLLRPSSQATKEKQEAERQAREGNTGRTQPERQDKPKIVW 635
Query: 170 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P D ++K E D + A I W S P ++
Sbjct: 636 FKPTDKRVPLIAIPTEQAPRDFVEKHQEYAD-----RIFVACIKRWPITSLHPFGTLVEQ 690
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVP---QEELLSRKDLRNFCIF 285
G G+++ + +A+L +N FS + + W V +E L +R+D R F
Sbjct: 691 LGVMGDLKVETDALLRDNNFGPDDFSDAVIKNVGFEDWSVANDGEEALKNRRDFRGEETF 750
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
TIDP+ + +LDDA+ + L DG +GVH+ D+++F+ + +D EA+ R T+VY++ R
Sbjct: 751 TIDPNGSKELDDAIHFKYLDDGRVEIGVHVTDIAHFIKANSLVDREAKKRGTAVYLMNRT 810
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWIGRTVIRSCCKLSYEHA 402
+ MLP LS ++ LNPG +R S+ + + A V + WIG++VI+S KLSY+
Sbjct: 811 VNMLPPKLSNDICCLNPGEERYTVSVVFKADPASGKVFEDETWIGKSVIKSSGKLSYDEV 870
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
+I G D S+ + IK L+ +S+ + RF D ++
Sbjct: 871 DSVISGNDDSVSAAR-----------------AKDIKMLHHISQKFRQTRFGDRVSDVKA 913
Query: 463 SKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
+ ++ D+ P + + + EE L N T A+ +A P+ ALLRR PN
Sbjct: 914 LRLMYQLDDENVPVEQNIFDSSPAHECIEELSHLVNATVAKKLAAGLPEKALLRRQAPPN 973
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
R+L G +L+T SSG SL + +D L + + M A Y
Sbjct: 974 PRRLMTIAERMGAIGYELNTESSGSLQNSLFEV-----EDDDLRKGMETLVIKSMPRAKY 1028
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
F +G ++ + HYAL P YTHFT+P RRY D+VVHR L A L
Sbjct: 1029 FIAGKLPEE-QYPHYALNLPRYTHFTNPSRRYADIVVHRQLEAVL 1072
>gi|378729436|gb|EHY55895.1| hypothetical protein HMPREF1120_04009 [Exophiala dermatitidis
NIH/UT8656]
Length = 1363
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 178/657 (27%), Positives = 297/657 (45%), Gaps = 94/657 (14%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAK---KNRSSLSVPDR-EYIQL 170
G VV++IER + G +G L +Q K + ++A+ +RS D+ + +
Sbjct: 583 GHVVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAERNARDGGHSRSESRQQDKPKIVWF 642
Query: 171 TPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHVF 229
PT + P + + + P D + K ++ + + A I W S P ++
Sbjct: 643 KPTDKRVPLIAIPTEQAPRDFVDKHMDYAN-----RIFVACIKRWPITSLHPFGTLVEQL 697
Query: 230 GRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIFT 286
G G++ + +A+L +N FS L + W + E L +R+DLR+ FT
Sbjct: 698 GEMGDLRVETDALLRDNNFGSDEFSDAVLKSVGWDDWSLASESEDFLAARRDLRDERTFT 757
Query: 287 IDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKI 346
IDP+ +DLDDA+ + + DG+ VG+H+ D+++FV + +D EA+ R T VY++ R +
Sbjct: 758 IDPNGTSDLDDAIHFKSVEDGLVEVGIHVTDIAHFVKANSLVDREAKKRGTGVYLVNRAV 817
Query: 347 PMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV--DRWIGRTVIRSCCKLSYEHAQD 404
MLP LS V SL PG RL S+ + +N V + WIG+T+I+S KL+Y
Sbjct: 818 NMLPPKLSSGVCSLIPGEGRLTVSVIFKVNPETGKVEGEPWIGKTIIQSSGKLAYRDVDA 877
Query: 405 IIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSK 464
+I G+G L+G V IK+L+ ++ ++ RF + + +
Sbjct: 878 VIK-----------GDGNAGLHGA-----TVDDIKTLHTIANKFREARFGHRSANISPLR 921
Query: 465 PVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPNMR 524
++ D+ P + + + + EE AN A+ I A PD ALLRR PN R
Sbjct: 922 LLYQLDDENVPVEQNIFNTSAAHEIVEEICCKANFFVAQKILAALPDKALLRRQAPPNPR 981
Query: 525 KLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASYFC 584
+L F ++ G ++DT+SSG SL + +D L + + +Q A Y+
Sbjct: 982 RLLTFADRMTRAGYEIDTTSSGTLQNSLFKV-----EDPDLRKGMETLLIKTLQRAKYYI 1036
Query: 585 SGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLPKNN 644
+ ++ HYAL P+YTHFT+P RRY D+VVHR L AAL
Sbjct: 1037 ADQVSEEQRQ-HYALNLPIYTHFTNPSRRYADIVVHRQLEAALS---------------- 1079
Query: 645 HREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKLACRN 704
+ + E LE L +A CN++K +
Sbjct: 1080 ---------------NTEFTEDLES------------------LAKMAEQCNNKKDNAHS 1106
Query: 705 VKDACVKLYMWILLKKKEV-----LLSEARVLALGPRFMTIYIEKLAIERRIYYDEV 756
++ V + ++ KK L+SE V+ + + I + E+R++ D++
Sbjct: 1107 AQEQSVHIESCRMMDKKSKELGGDLVSEGIVICVYESAFDVLIPEYGFEKRVHCDQL 1163
>gi|418027025|ref|ZP_12665735.1| Hydrolase acting on ester bonds [Streptococcus thermophilus CNCM
I-1630]
gi|354693337|gb|EHE93108.1| Hydrolase acting on ester bonds [Streptococcus thermophilus CNCM
I-1630]
Length = 561
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 148/434 (34%), Positives = 230/434 (52%), Gaps = 33/434 (7%)
Query: 195 LEEGDATIE-MELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSG 252
+++G +E E++ I+++ N + V + G G+ + +L E+ S
Sbjct: 78 IKKGPVALEGTEIIKVDIEKYPNRHHDYFVGSVRDIIGHQGDAGIDVLEVL-ESMDIVSE 136
Query: 253 FSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVG 312
F + ++ VP QE+L+ R DLR FTID + A DLDDA+ I+RL +G +G
Sbjct: 137 FPEDVMAEAEAVPDAPSQEDLIGRVDLRQEVTFTIDGADAKDLDDAVHIKRLPNGNYELG 196
Query: 313 VHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIF 372
VHIADVSY+V G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDRL S
Sbjct: 197 VHIADVSYYVTEGSALNREAAARGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTLSAI 256
Query: 373 WDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWS 432
++ G V++ I ++VI++ +++Y +++ G P+ QF+
Sbjct: 257 MEITPKGKVINHKICQSVIKTTFRMTYSDVNEMLAGN-------------PEKIEQFKP- 302
Query: 433 DVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEE 492
++ S+ ++ E+ KIL+D R GAL + S+ L ++ G P D V+ R + E
Sbjct: 303 -IMDSVSAMAELHKILEDMRERRGALNFDTSEARILVNDKGMPVDIVVRERGTAERMIES 361
Query: 493 FMLLANKTAAEVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS 551
FML AN+ AE A+A P + R H P KL+ F + S G+Q+ +++
Sbjct: 362 FMLAANECVAEHFAKAKLP--FIYRIHEEPKAEKLQRFMDYASIFGIQIKGTANKMDQLD 419
Query: 552 LE--QAREKLKDDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTS 609
L+ AR + K + ++++ R MQ A Y + + GHY LA YTHFTS
Sbjct: 420 LQDFMARVQGKPGAEVMNMML---LRSMQQARY-------SEHNHGHYGLAAQYYTHFTS 469
Query: 610 PLRRYPDLVVHRTL 623
P+RRYPDL+VHR +
Sbjct: 470 PIRRYPDLLVHRMI 483
>gi|288905816|ref|YP_003431038.1| exoribonuclease [Streptococcus gallolyticus UCN34]
gi|325978851|ref|YP_004288567.1| ribonuclease R [Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|386338286|ref|YP_006034455.1| exoribonuclease R [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
gi|288732542|emb|CBI14114.1| putative exoribonuclease [Streptococcus gallolyticus UCN34]
gi|325178779|emb|CBZ48823.1| ribonuclease R [Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|334280922|dbj|BAK28496.1| exoribonuclease R [Streptococcus gallolyticus subsp. gallolyticus
ATCC 43143]
Length = 777
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 223/421 (52%), Gaps = 28/421 (6%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ + HV + G G+V + +L E+ S F + ++
Sbjct: 181 EIIKVDIDKYPTRGHDYFVGHVRDIVGHQGDVGIDVLEVL-ESMDIKSEFPEDVMAEANA 239
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP +++++ R DLRN FTID + A DLDDA+ I+ L++G +GVHIADVSY+V
Sbjct: 240 VPDAPSEKDMIGRVDLRNEITFTIDGADAKDLDDAVHIKLLNNGNFELGVHIADVSYYVT 299
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+AL+ EA R TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 300 EGSALNREAVARGTSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSCLMEIDRNGHVVN 359
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I ++VI++ +++Y DII G +L Q++ +V SI +
Sbjct: 360 HQICQSVIKTTFRMTYSDVNDIITGD-------------EELIEQYQP--IVDSIHHMTA 404
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ IL+ R GAL + S+ + ++ G P D VL R + E FML AN+T AE
Sbjct: 405 LHNILETMRVRRGALNFDTSEAKIIVNDKGMPVDIVLRQRGIAERMIESFMLAANETVAE 464
Query: 504 VIA-RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
A R P + R H P KL++F + S G+Q+ +++ Q+L+ K++
Sbjct: 465 HFAKRKLP--FIYRIHEEPKAEKLQKFLDYASIFGVQIHGTANKITQQALQDFMAKVEGK 522
Query: 563 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
++L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 523 PGA-EVLNMMLLRSMQQARY-------SEHNHGHYGLAAEYYTHFTSPIRRYPDLLVHRM 574
Query: 623 L 623
+
Sbjct: 575 I 575
>gi|345303465|ref|YP_004825367.1| ribonuclease R [Rhodothermus marinus SG0.5JP17-172]
gi|345112698|gb|AEN73530.1| ribonuclease R [Rhodothermus marinus SG0.5JP17-172]
Length = 751
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 159/432 (36%), Positives = 219/432 (50%), Gaps = 41/432 (9%)
Query: 207 VAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPW 266
V ID +++ P+ VL V G + Q+ A+ + +GF L +P
Sbjct: 201 VVVSIDRFDDPKASPEGRVLEVLGPASDPRVQVLALALSKDVR-TGFPEAVLKEAERIPD 259
Query: 267 EVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGT 326
+P+ E R DLR+ +FTIDPS A D DDAL + RL +G VGVHIADVSY+V PG+
Sbjct: 260 TIPEREHRRRLDLRDREVFTIDPSDAKDFDDALHLRRLPNGHIEVGVHIADVSYYVRPGS 319
Query: 327 ALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWI 386
ALD EA R TSVY++ R IPMLP LS +V SL PG D+L +S+ +L + VV I
Sbjct: 320 ALDEEAYQRGTSVYLVDRVIPMLPEKLSNQVCSLRPGEDKLTYSVLMELTPSARVVRYQI 379
Query: 387 GRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSK 446
TVI S + +YE AQ IIDG + + L E ++ +E+++
Sbjct: 380 RETVIHSRQRFTYEEAQAIIDG-----TDHPLAE----------------PVRLAHELAQ 418
Query: 447 ILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
L+ R GA+ + + DE G P R + L EEFMLLAN+ AE I
Sbjct: 419 KLRRARMEAGAIDFDLPEVKVELDEAGNPIRIYRKERLAAHQLIEEFMLLANRLVAETIG 478
Query: 507 -RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLD-----TSSSGQFHQSLEQAREKLK 560
RA + R H P+ K+R+ + G L+ T SS ++ L+ + +
Sbjct: 479 KRAEAPPFVYRIHDRPDAEKIRQLAQYVRVFGYHLELTEDGTVSSKALNELLQHVKGTPE 538
Query: 561 DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVH 620
+ ++ A R M A Y + GHY LAF YTHFTSP+RRYPDL+VH
Sbjct: 539 E-----PVIEEAALRAMAKARYSTQ-------NIGHYGLAFDFYTHFTSPIRRYPDLMVH 586
Query: 621 RTLNAAL-EAEK 631
R L L +AEK
Sbjct: 587 RLLKQYLKKAEK 598
>gi|424787810|ref|ZP_18214574.1| ribonuclease R [Streptococcus intermedius BA1]
gi|422113564|gb|EKU17302.1| ribonuclease R [Streptococcus intermedius BA1]
Length = 779
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 168/527 (31%), Positives = 254/527 (48%), Gaps = 48/527 (9%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAI-LYENAICCSGFSPESLSCLP 262
E++ ID++ ++ F A +L V G + P I+ + + E+ S F L
Sbjct: 178 EILKVEIDKYPTKKHDFFVATILDVVGHKDD--PGIDVLEVLESMDIVSEFPERVLKEAS 235
Query: 263 CVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFV 322
+P +++ R DLRN FTID + A DLDDA+ I++LS+G +GVHIADVSY+V
Sbjct: 236 AIPDMPSKKDFEGRLDLRNEITFTIDGADAKDLDDAVHIKKLSNGHFELGVHIADVSYYV 295
Query: 323 LPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV 382
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV
Sbjct: 296 QEGSELDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPNVDRLTQSAIMEIDQKGRVV 355
Query: 383 DRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLY 442
+ +TVI++ +++Y DII G D E + +V SI+ +
Sbjct: 356 KHTVTQTVIKTTFRMTYSDVNDIITG--DKEKRTA-------------FKTIVPSIEQMT 400
Query: 443 EVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAA 502
E+ IL+ RF GAL + + L ++ G P D +L R + E FML+AN+T A
Sbjct: 401 ELHAILETMRFKRGALNFDTKEAKILVNKTGRPVDIILRQRGVAERMIESFMLVANETVA 460
Query: 503 EVIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKD 561
E AR P L R H P K+++F + S G+++ ++ QS Q K
Sbjct: 461 EHFARLNLP--FLYRIHEEPKAEKVQKFIDYASTFGVRV-YGTANSISQSALQDIMKAVH 517
Query: 562 DYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
++L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 518 GQSYEEVLSMMLLRSMQQARY-------SEHNHGHYGLAAEFYTHFTSPIRRYPDLLVHR 570
Query: 622 TLNAALEAEKLYWKHRRMLP------KNNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 673
+ + K+ +++P + R + + E G E +
Sbjct: 571 MVRDYGHSLKIADHFEQVIPGIASQSSSRERRAIEAEREVEAMKKAEFMEEFVGEEFDGI 630
Query: 674 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDACV 710
+ +K+G+ + L++VA H N+R L + K V
Sbjct: 631 VSSVVKFGLFVELSNTVEGLIHVANLPEFFHYNERNLTLQGEKSGVV 677
>gi|307704704|ref|ZP_07641603.1| ribonuclease R [Streptococcus mitis SK597]
gi|307621751|gb|EFO00789.1| ribonuclease R [Streptococcus mitis SK597]
Length = 784
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 166/526 (31%), Positives = 262/526 (49%), Gaps = 48/526 (9%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRQ-------------EYQKIVPSIQLMAK 402
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ + L++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHETLENMRMKRGALNFDTNEAKILVDKQGKPVDIVLRQRGVAERMIESFMLMANETVAE 462
Query: 504 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
++ P + R H P K+++F + S GL + ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLHIYGTASEISQEALQDIMRTVEGE 520
Query: 563 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 622 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 673
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 674 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDAC 709
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEKSGT 677
>gi|182683920|ref|YP_001835667.1| VacB/Rnb family exoribonuclease [Streptococcus pneumoniae CGSP14]
gi|182629254|gb|ACB90202.1| exoribonuclease, VacB/Rnb family [Streptococcus pneumoniae CGSP14]
Length = 784
Score = 226 bits (577), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 166/523 (31%), Positives = 263/523 (50%), Gaps = 48/523 (9%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFAASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRK-------------EYHKIVSSIELMAK 402
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ + L++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHETLENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGIAERMIESFMLMANETVAE 462
Query: 504 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 563 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 622 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 673
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 674 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVK 706
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEK 674
>gi|451848255|gb|EMD61561.1| hypothetical protein COCSADRAFT_96596 [Cochliobolus sativus ND90Pr]
Length = 1360
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 155/525 (29%), Positives = 252/525 (48%), Gaps = 42/525 (8%)
Query: 117 TGRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDRE----YIQ 169
G +V++IER + G +G L +Q K + + A++ + + P+R+ +
Sbjct: 576 AGHIVAVIERVAGQMFSGSLGLLRPSSQATKEKQEAERQAREGNTGRTQPERQDKPKIVW 635
Query: 170 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P D ++K E D + A I W S P ++
Sbjct: 636 FKPTDKRVPLIAIPTEQAPRDFVEKHQEYAD-----RIFVACIKRWPITSLHPFGTLVEQ 690
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEV---PQEELLSRKDLRNFCIF 285
G G+++ + +A+L +N FS + + W V +E L +R+D R F
Sbjct: 691 LGVMGDLKVETDALLRDNNFGPDDFSDAVIKNVGFEDWSVVNDGEEALKNRRDFRGEETF 750
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
TIDP+ + +LDDA+ + L DG +GVH+ D+++F+ + +D EA+ R T+VY++ R
Sbjct: 751 TIDPNGSKELDDAIHFKYLDDGRVEIGVHVTDIAHFIKANSLVDREAKKRGTAVYLMNRT 810
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVV---DRWIGRTVIRSCCKLSYEHA 402
+ MLP LS ++ LNPG +R S+ + + A V + WIG++VI+S KLSY+
Sbjct: 811 VNMLPPKLSNDICCLNPGEERYTVSVVFKADPASGKVFEDETWIGKSVIKSSGKLSYDEV 870
Query: 403 QDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLEN 462
+I G D S+ + IK L+ +S+ + RF D ++
Sbjct: 871 DSVISGNDDSVSAAR-----------------AKDIKMLHHISQKFRQTRFGDRVSDVKA 913
Query: 463 SKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPAPN 522
+ ++ D+ P + + + EE L N T A+ +A P+ ALLRR PN
Sbjct: 914 LRLMYQLDDENVPVEQNIFDSSPAHECIEELSHLVNATVAKKLAAGLPEKALLRRQAPPN 973
Query: 523 MRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLASY 582
R+L G +L+T SSG SL + +D L + + M A Y
Sbjct: 974 PRRLMTIAERMGAIGYELNTESSGSLQNSLFEV-----EDDDLRKGMETLVIKSMPRAKY 1028
Query: 583 FCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAAL 627
F +G ++ + HYAL P YTHFT+P RRY D+VVHR L A L
Sbjct: 1029 FIAGKLPEE-QYPHYALNLPRYTHFTNPSRRYADIVVHRQLEAVL 1072
>gi|15902922|ref|NP_358472.1| exoribonuclease R [Streptococcus pneumoniae R6]
gi|116515936|ref|YP_816344.1| ribonuclease R [Streptococcus pneumoniae D39]
gi|421265998|ref|ZP_15716881.1| ribonuclease R [Streptococcus pneumoniae SPAR27]
gi|15458483|gb|AAK99682.1| Exoribonuclease R [Streptococcus pneumoniae R6]
gi|116076512|gb|ABJ54232.1| ribonuclease R [Streptococcus pneumoniae D39]
gi|242266981|gb|ACS91342.1| RNase R [Streptococcus pneumoniae]
gi|395868734|gb|EJG79851.1| ribonuclease R [Streptococcus pneumoniae SPAR27]
Length = 784
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 166/523 (31%), Positives = 263/523 (50%), Gaps = 48/523 (9%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRK-------------EYHKIVSSIELMAK 402
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ + L++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHETLENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGIAERMIESFMLMANETVAE 462
Query: 504 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 563 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 622 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 673
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 674 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVK 706
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEK 674
>gi|221231737|ref|YP_002510889.1| exoribonuclease R [Streptococcus pneumoniae ATCC 700669]
gi|415698181|ref|ZP_11457092.1| ribonuclease R [Streptococcus pneumoniae 459-5]
gi|415749376|ref|ZP_11477320.1| ribonuclease R [Streptococcus pneumoniae SV35]
gi|415752060|ref|ZP_11479171.1| ribonuclease R [Streptococcus pneumoniae SV36]
gi|418105035|ref|ZP_12742094.1| ribonuclease R [Streptococcus pneumoniae GA44500]
gi|418123247|ref|ZP_12760181.1| ribonuclease R [Streptococcus pneumoniae GA44378]
gi|418127833|ref|ZP_12764729.1| ribonuclease R [Streptococcus pneumoniae NP170]
gi|418137009|ref|ZP_12773851.1| ribonuclease R [Streptococcus pneumoniae GA11663]
gi|418178006|ref|ZP_12814590.1| ribonuclease R [Streptococcus pneumoniae GA41565]
gi|418182603|ref|ZP_12819164.1| ribonuclease R [Streptococcus pneumoniae GA43380]
gi|419473038|ref|ZP_14012889.1| ribonuclease R [Streptococcus pneumoniae GA13430]
gi|220674197|emb|CAR68725.1| putative exoribonuclease R [Streptococcus pneumoniae ATCC 700669]
gi|353778105|gb|EHD58575.1| ribonuclease R [Streptococcus pneumoniae GA44500]
gi|353797334|gb|EHD77669.1| ribonuclease R [Streptococcus pneumoniae GA44378]
gi|353800294|gb|EHD80608.1| ribonuclease R [Streptococcus pneumoniae NP170]
gi|353844780|gb|EHE24823.1| ribonuclease R [Streptococcus pneumoniae GA41565]
gi|353850840|gb|EHE30844.1| ribonuclease R [Streptococcus pneumoniae GA43380]
gi|353901636|gb|EHE77168.1| ribonuclease R [Streptococcus pneumoniae GA11663]
gi|379552545|gb|EHZ17634.1| ribonuclease R [Streptococcus pneumoniae GA13430]
gi|381309756|gb|EIC50589.1| ribonuclease R [Streptococcus pneumoniae SV36]
gi|381317186|gb|EIC57916.1| ribonuclease R [Streptococcus pneumoniae 459-5]
gi|381317670|gb|EIC58395.1| ribonuclease R [Streptococcus pneumoniae SV35]
Length = 784
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 166/523 (31%), Positives = 263/523 (50%), Gaps = 48/523 (9%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRK-------------EYHKIVSSIELMAK 402
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ + L++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHETLENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGIAERMIESFMLMANETVAE 462
Query: 504 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 563 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 622 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 673
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 674 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVK 706
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEK 674
>gi|419532199|ref|ZP_14071716.1| ribonuclease R [Streptococcus pneumoniae GA47794]
gi|379606369|gb|EHZ71117.1| ribonuclease R [Streptococcus pneumoniae GA47794]
Length = 784
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 166/526 (31%), Positives = 263/526 (50%), Gaps = 48/526 (9%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRK-------------EYHKIVPSIELMAK 402
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ + L++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHETLENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGIAERMIESFMLMANETVAE 462
Query: 504 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 563 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLFMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 622 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 673
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 674 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDAC 709
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEKSGI 677
>gi|421311715|ref|ZP_15762322.1| ribonuclease R [Streptococcus pneumoniae GA58981]
gi|395912293|gb|EJH23156.1| ribonuclease R [Streptococcus pneumoniae GA58981]
Length = 784
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 166/526 (31%), Positives = 263/526 (50%), Gaps = 48/526 (9%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRK-------------EYHKIVSSIELMAK 402
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ + L++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHETLENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGIAERMIESFMLMANETVAE 462
Query: 504 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 563 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAANYYTHFTSPIRRYPDLLVHR 571
Query: 622 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 673
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 674 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDAC 709
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEKSGI 677
>gi|206603225|gb|EDZ39705.1| Exoribonuclease II [Leptospirillum sp. Group II '5-way CG']
Length = 744
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 177/533 (33%), Positives = 257/533 (48%), Gaps = 71/533 (13%)
Query: 97 GMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGGSRKDAKKN 156
M+ + LS ++ + R G+VV II RS R +VG L+ KGG
Sbjct: 111 AMHQDKVLSVLLGTDHRGRSEGQVVEIISRS--RSSVVGVLH-----ELKGG-------- 155
Query: 157 RSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVAARIDEWNE 216
Y L+P PK P ++V D+ ++L+EG ELV I + E
Sbjct: 156 ----------YF-LSPRDPKIPHEFLVV----DNSSEKLKEG------ELVVLDILRYPE 194
Query: 217 ESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEELLSR 276
P+ + G + + ++ + + S F + + EV E +R
Sbjct: 195 PGHIPEGKISRFLGDPSDPSVDTDLVIATHHLSIS-FPDRVEAEAKRMAREVEVEPSENR 253
Query: 277 KDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRS 336
DLR+ I TID A D DDALS+ DG ++G+HIADV+ +VLPG+ LD EA R
Sbjct: 254 VDLRHLEIMTIDGDRARDFDDALSVVESPDGTFQIGIHIADVAAYVLPGSELDKEAFRRG 313
Query: 337 TSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCK 396
TSVY R +PM P +LS V SLNP DRLA ++ ++ AG V++ I R+VIRS +
Sbjct: 314 TSVYFPDRVVPMFPEVLSNGVLSLNPDEDRLARTVMVRMSPAGQVLESSIFRSVIRSRLR 373
Query: 397 LSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDG 456
+Y I+ G ES+++ P+ S ++SL+ ++K L+D+RF +G
Sbjct: 374 ATYSRVHPILAG----ESTDS-----PE-------SKFSVQLRSLWTLAKKLRDERFQNG 417
Query: 457 ALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLR 516
+L + +P + D G P D + S R +FL EEFMLLAN+ A + R F A+ R
Sbjct: 418 SLDFDLPEPEIVLDLRGEPVDIIRSPRYLSHFLVEEFMLLANRIVAAELTRRF-SMAMYR 476
Query: 517 RHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQS-----LEQAREKLKDDYVLFDILIN 571
H P+ K F G+ + G+ S LE R + V F +L
Sbjct: 477 VHETPSPEKTESLGIFLGALGISIPKRKEGRMRASDLSAVLESTRGTPLEKMVHFSVL-- 534
Query: 572 YATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 624
R ++ A Y D GH+ LA YTHFTSP+RRYPDL+VHR L+
Sbjct: 535 ---RSLKQARY-------DVYPLGHFGLAMDDYTHFTSPIRRYPDLIVHRLLD 577
>gi|148988420|ref|ZP_01819867.1| preprotein translocase subunit SecG [Streptococcus pneumoniae
SP6-BS73]
gi|149010378|ref|ZP_01831749.1| SsrA-binding protein [Streptococcus pneumoniae SP19-BS75]
gi|168491065|ref|ZP_02715208.1| ribonuclease R [Streptococcus pneumoniae CDC0288-04]
gi|303254442|ref|ZP_07340548.1| VacB/Rnb family exoribonuclease [Streptococcus pneumoniae BS455]
gi|303259888|ref|ZP_07345863.1| exoribonuclease, VacB/Rnb family protein [Streptococcus pneumoniae
SP-BS293]
gi|303262302|ref|ZP_07348246.1| exoribonuclease, VacB/Rnb family protein [Streptococcus pneumoniae
SP14-BS292]
gi|303264724|ref|ZP_07350642.1| exoribonuclease, VacB/Rnb family protein [Streptococcus pneumoniae
BS397]
gi|303267331|ref|ZP_07353191.1| exoribonuclease, VacB/Rnb family protein [Streptococcus pneumoniae
BS457]
gi|303269136|ref|ZP_07354915.1| exoribonuclease, VacB/Rnb family protein [Streptococcus pneumoniae
BS458]
gi|387759228|ref|YP_006066206.1| putative exoribonuclease R [Streptococcus pneumoniae INV200]
gi|417686410|ref|ZP_12335688.1| ribonuclease R [Streptococcus pneumoniae GA41301]
gi|418139323|ref|ZP_12776153.1| ribonuclease R [Streptococcus pneumoniae GA13338]
gi|418180432|ref|ZP_12817003.1| ribonuclease R [Streptococcus pneumoniae GA41688]
gi|418193603|ref|ZP_12830095.1| ribonuclease R [Streptococcus pneumoniae GA47439]
gi|418200396|ref|ZP_12836841.1| ribonuclease R [Streptococcus pneumoniae GA47976]
gi|419514528|ref|ZP_14054155.1| ribonuclease R [Streptococcus pneumoniae England14-9]
gi|419520903|ref|ZP_14060499.1| ribonuclease R [Streptococcus pneumoniae GA05245]
gi|421268178|ref|ZP_15719049.1| ribonuclease R [Streptococcus pneumoniae SPAR95]
gi|421296032|ref|ZP_15746744.1| ribonuclease R [Streptococcus pneumoniae GA58581]
gi|147764859|gb|EDK71788.1| SsrA-binding protein [Streptococcus pneumoniae SP19-BS75]
gi|147926101|gb|EDK77175.1| preprotein translocase subunit SecG [Streptococcus pneumoniae
SP6-BS73]
gi|183574749|gb|EDT95277.1| ribonuclease R [Streptococcus pneumoniae CDC0288-04]
gi|301801817|emb|CBW34528.1| putative exoribonuclease R [Streptococcus pneumoniae INV200]
gi|302598609|gb|EFL65649.1| VacB/Rnb family exoribonuclease [Streptococcus pneumoniae BS455]
gi|302636625|gb|EFL67116.1| exoribonuclease, VacB/Rnb family protein [Streptococcus pneumoniae
SP14-BS292]
gi|302639093|gb|EFL69553.1| exoribonuclease, VacB/Rnb family protein [Streptococcus pneumoniae
SP-BS293]
gi|302641323|gb|EFL71691.1| exoribonuclease, VacB/Rnb family protein [Streptococcus pneumoniae
BS458]
gi|302643141|gb|EFL73428.1| exoribonuclease, VacB/Rnb family protein [Streptococcus pneumoniae
BS457]
gi|302645811|gb|EFL76040.1| exoribonuclease, VacB/Rnb family protein [Streptococcus pneumoniae
BS397]
gi|332076247|gb|EGI86713.1| ribonuclease R [Streptococcus pneumoniae GA41301]
gi|353846044|gb|EHE26082.1| ribonuclease R [Streptococcus pneumoniae GA41688]
gi|353859583|gb|EHE39533.1| ribonuclease R [Streptococcus pneumoniae GA47439]
gi|353865443|gb|EHE45352.1| ribonuclease R [Streptococcus pneumoniae GA47976]
gi|353905566|gb|EHE80989.1| ribonuclease R [Streptococcus pneumoniae GA13338]
gi|379539917|gb|EHZ05094.1| ribonuclease R [Streptococcus pneumoniae GA05245]
gi|379637624|gb|EIA02177.1| ribonuclease R [Streptococcus pneumoniae England14-9]
gi|395871094|gb|EJG82205.1| ribonuclease R [Streptococcus pneumoniae SPAR95]
gi|395897245|gb|EJH08209.1| ribonuclease R [Streptococcus pneumoniae GA58581]
Length = 784
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 166/523 (31%), Positives = 263/523 (50%), Gaps = 48/523 (9%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRK-------------EYHKIVSSIELMAK 402
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ + L++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHETLENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGIAERMIESFMLMANETVAE 462
Query: 504 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 563 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 622 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 673
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 674 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVK 706
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEK 674
>gi|119495688|ref|XP_001264623.1| cell wall biogenesis protein phosphatase Ssd1, putative [Neosartorya
fischeri NRRL 181]
gi|119412785|gb|EAW22726.1| cell wall biogenesis protein phosphatase Ssd1, putative [Neosartorya
fischeri NRRL 181]
Length = 1376
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 186/677 (27%), Positives = 299/677 (44%), Gaps = 99/677 (14%)
Query: 118 GRVVSIIERSPRR--DGIVGFLN-VNQWFNYKGGSRKDAKKNRSSLSVPDREY-----IQ 169
G +V++IER + G +G L +Q K + + A+ DR+ +
Sbjct: 592 GHIVAVIERIAGQMFSGTLGLLRPSSQATKEKQEAERQARDGGHGRQQHDRQQEKPKIVW 651
Query: 170 LTPTHPKYPKMVVLVKDLP-DSIKKRLEEGDATIEMELVAARIDEWNEESPFPQAHVLHV 228
PT + P + + + P D ++K E + + A I W S P ++
Sbjct: 652 FKPTDKRVPLIAIPTEQAPRDFVEKHQEYAN-----RIFVACIKRWPITSLHPFGTLVEQ 706
Query: 229 FGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEVPQEE---LLSRKDLRNFCIF 285
G G+++ + +A+L +N FS L + W V E L SR+D R+ F
Sbjct: 707 LGEMGDLKVETDALLRDNNFGADEFSDAVLKSIGWEDWSVASEGDALLESRRDFRSETTF 766
Query: 286 TIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRK 345
T+DPS A +LD+A I+ L+DG +G+H++D+++FV + +D EA+ R T+VY++ R
Sbjct: 767 TVDPSGAMELDNAYHIKPLADGKVEIGIHVSDIAHFVKANSLVDREAKKRGTAVYLMDRL 826
Query: 346 IPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDR--WIGRTVIRSCCKLSYEHAQ 403
+ MLP +S E+ SL P DRL S+ + + VD WIG+++++S +LSY+
Sbjct: 827 VNMLPRRVSTELCSLLPEQDRLTVSVVFTADPETGAVDDDVWIGKSIVKSAGRLSYDEVN 886
Query: 404 DIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENS 463
I G+ +V + +I++L +++ ++ RF + R+ N
Sbjct: 887 FAIKGESNVSVAGI----------------SANTIQTLNAITQKFREARFGN---RVSNP 927
Query: 464 KPVFL---FDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIARAFPDSALLRRHPA 520
P+ L D+ P + + D L EE AN A + A PD A LRR P+
Sbjct: 928 PPLRLLHQLDDENVPVERNIFDSTDARELVEELRHKANFFVARKLVSAMPDKAFLRRQPS 987
Query: 521 PNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDDYVLFDILINYATRPMQLA 580
PN R+L F ++ G D SSSG SL K++DD L + + MQ A
Sbjct: 988 PNSRRLHSFIDRMNRLGYDFDPSSSGTLQSSL----CKVQDDD-LRKGMETVLLKAMQRA 1042
Query: 581 SYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRML 640
Y+ + +D+ HY L PVYTHFT+P RRY D++VHR L A L
Sbjct: 1043 KYYVASTVQDEQRH-HYTLNLPVYTHFTNPSRRYADIIVHRQLEAVLS------------ 1089
Query: 641 PKNNHREGVRGRFLTGIFYDKDAAESLEGREALSVAALKYGVPCADILVNVATHCNDRKL 700
G D ESL AD+ CN +K
Sbjct: 1090 --------------NGAIEFSDDVESLSK--------------TADL-------CNTKKD 1114
Query: 701 ACRNVKDACVKLYMWILLKKKEV-----LLSEARVLALGPRFMTIYIEKLAIERRIYYDE 755
+ N ++ V + + KK L+SE VL + + I + E+R++ D+
Sbjct: 1115 SAHNAQEQSVHIEACRSMDKKRQEIGGDLISEGIVLCVYESAFDVLIPEFGFEKRVHCDQ 1174
Query: 756 VEGLIVEWLETTSTLVL 772
+ E+ + T L L
Sbjct: 1175 LPLKKAEYRKETRVLEL 1191
>gi|417923309|ref|ZP_12566778.1| ribonuclease R [Streptococcus mitis SK569]
gi|342837113|gb|EGU71312.1| ribonuclease R [Streptococcus mitis SK569]
Length = 784
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 166/526 (31%), Positives = 262/526 (49%), Gaps = 48/526 (9%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAKS 237
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ LD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSTLDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRQ-------------EYQKIVPSIELMAK 402
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ +IL+ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHEILESMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGVAERMIESFMLMANETVAE 462
Query: 504 VIAR-AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLNLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRTVEGE 520
Query: 563 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEQNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 622 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 673
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 674 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDAC 709
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSNVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEKSGT 677
>gi|406668281|ref|ZP_11076019.1| Ribonuclease R [Bacillus isronensis B3W22]
gi|405383884|gb|EKB43345.1| Ribonuclease R [Bacillus isronensis B3W22]
Length = 802
Score = 226 bits (576), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 168/543 (30%), Positives = 263/543 (48%), Gaps = 66/543 (12%)
Query: 89 VSSSQQNDGMNAIERLSAMISSYPTKRPTGRVVSIIERSPRRDGIVGFLNVNQWFNYKGG 148
+ + + N +N L ++ R G VV I+ERS + VG N+ F +
Sbjct: 99 IPAHEVNGALNEDTVLVRVLKEQSGDRREGTVVKIVERS--KTSFVGTYQANRGFGF--- 153
Query: 149 SRKDAKKNRSSLSVPDREYIQLTPTHPKYPKMVVLVKDLPDSIKKRLEEGDATIEMELVA 208
D KK + + + + H K+VV V PD+ K
Sbjct: 154 VVTDDKKLNMDIFIAKEDALGAVDGH----KVVVEVTHWPDATKS--------------- 194
Query: 209 ARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPCVPWEV 268
+ + G + I +ILY+ I F E + VP E+
Sbjct: 195 ------------ATGMITKILGHKNDPGVDILSILYKYDIPPE-FPQEVVQAAIDVPDEI 241
Query: 269 PQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTAL 328
+++L+ R+DLRN I TID + A DLDDA+++ + +G ++GVHIADVSY+V G+ L
Sbjct: 242 TEQDLVGRRDLRNEVIVTIDGADAKDLDDAVTVVKNDNGTYKLGVHIADVSYYVTQGSVL 301
Query: 329 DIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGR 388
D EA R+TSVY+ R IPM+P LS + SLNP VDRL S ++ AG VV I +
Sbjct: 302 DQEAYERATSVYLTDRVIPMIPHRLSNGICSLNPQVDRLTLSCEMTIDQAGHVVKHEIFQ 361
Query: 389 TVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKIL 448
+VI++ +++Y +I++ + P+L ++E ++V K + ++++IL
Sbjct: 362 SVIKTTERMTYSDVYNILENP----------DENPELMERYE--NLVPMFKDMADLAQIL 409
Query: 449 KDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA-R 507
++KR GA+ + + L +E G P D VL R L EEFML AN+T AE
Sbjct: 410 RNKRMARGAIDFDFKESKVLVNEDGWPTDIVLRERTVAERLIEEFMLAANETIAEHFHWM 469
Query: 508 AFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQ---AREKLKDDYV 564
P + R H P KL+ F F + G+ + + + ++L++ + E L ++ V
Sbjct: 470 ELP--FIYRIHEDPKPEKLQRFFEFVTNFGIMIKGTGNSVHPKALQEVIRSIEGLPEEPV 527
Query: 565 LFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLN 624
+ +L+ R MQ A Y+ GH+ L+ YTHFTSP+RRYPDL+VHR +
Sbjct: 528 ISTMLL----RSMQQAKYYAES-------LGHFGLSTEFYTHFTSPIRRYPDLIVHRLIR 576
Query: 625 AAL 627
L
Sbjct: 577 TYL 579
>gi|212640318|ref|YP_002316838.1| Exoribonuclease R [Anoxybacillus flavithermus WK1]
gi|212561798|gb|ACJ34853.1| Exoribonuclease R [Anoxybacillus flavithermus WK1]
Length = 758
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 145/433 (33%), Positives = 225/433 (51%), Gaps = 30/433 (6%)
Query: 198 GDATIEMELVAARIDEWNEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPES 257
+ +E V R+ + E + V+ + G + I +I++++ + F +
Sbjct: 166 ANGAVEGHKVVVRLTTYPEGRISAEGEVIKILGHKNDPGVDILSIIHKHGLPLQ-FPEDV 224
Query: 258 LSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIAD 317
L +P + +EE+ R+DLRN I TID A DLDDA+++ +L++G ++GVHIAD
Sbjct: 225 LEHANSIPDTISEEEIKGRRDLRNEMIVTIDGEDAKDLDDAVTVTKLANGNYKLGVHIAD 284
Query: 318 VSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNS 377
VS++V G+ +D EA R TSVY++ R IPM+P LS + SLNP VDRL S ++N
Sbjct: 285 VSHYVTEGSPIDREAYERGTSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMEIND 344
Query: 378 AGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRS 437
G+VV I ++VIR+ +++Y I+ V+ L E + L FE
Sbjct: 345 RGEVVSHEIFQSVIRTVERMTYSDVNRIL-----VDRDEALREKYAPLVPMFEL------ 393
Query: 438 IKSLYEVSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLA 497
+ E++ IL++KR GA+ + + L DE G PYD VL R L EEFML A
Sbjct: 394 ---MAELADILRNKRMKRGAIDFDFKEAKVLVDENGKPYDVVLRERSVAERLIEEFMLAA 450
Query: 498 NKTAAEVIARAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQARE 557
N+T AE + R H P KL+ F F + G + + + ++L++ E
Sbjct: 451 NETIAEHF-HWMNVPFIYRVHEDPKPEKLQRFLEFITNFGYIVKGTGNQIHPRALQEVLE 509
Query: 558 KLK---DDYVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRY 614
++ ++ V+ +++ R M+ A Y D GHY L+ YTHFTSP+RRY
Sbjct: 510 AVRGEPEEMVVSTVML----RSMKQARY-------DAESLGHYGLSTEFYTHFTSPIRRY 558
Query: 615 PDLVVHRTLNAAL 627
PDL+VHR + L
Sbjct: 559 PDLIVHRLIRTYL 571
>gi|403220834|dbj|BAM38967.1| exosome complex exonuclease rrp44 [Theileria orientalis strain
Shintoku]
Length = 1004
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 203/367 (55%), Gaps = 27/367 (7%)
Query: 268 VPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTA 327
+ ++ L R D RN +F++DP D+DDAL + L +G V VHIADV++FV G+
Sbjct: 542 IDKQTLERRVDYRNELVFSVDPPGCEDIDDALGCKTLKNGNFEVSVHIADVTHFVHEGSN 601
Query: 328 LDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIG 387
LD EA R T+VY++ R+ MLP LL+ + SL V+RL FS++W+++ G +++ W
Sbjct: 602 LDREASQRCTTVYLVDRRTDMLPKLLTTNLCSLMENVNRLTFSVYWEIDPNGLILNTWFS 661
Query: 388 RTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKI 447
++VIRS LSY+ AQD+ID + E + ++++L ++KI
Sbjct: 662 KSVIRSRRALSYKQAQDLIDSNYSDE--------------------MCVALRNLNNIAKI 701
Query: 448 LKDKRFTDGALRLENSKPVFLFD-EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIA 506
L+ +R GA+ LE+S+ F FD E +S + D N + EEFMLLAN + A I
Sbjct: 702 LRKQRMKRGAVELESSEVKFEFDVEKVQNLESYKT--YDTNKMIEEFMLLANISVATKIY 759
Query: 507 RAFPDSALLRRHPAPNMRKLREFEAFCSKHGLQ-LDTSSSGQFHQSLEQAREKLKDDYVL 565
FP ALLR HP P KL E + + G Q +S Q ++SL+ D +V
Sbjct: 760 DRFPKFALLRIHPPPFEEKLNELKRTLQQQGFQDFKYGNSKQLNESLDSLGSSKADKFVS 819
Query: 566 FDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNA 625
++ TR M A Y S D D+ ++ HY L YTHFTSP+RRY D++VHR L +
Sbjct: 820 AAKIL--TTRTMSQALYRNSNDLSDE-EFRHYGLCCEYYTHFTSPIRRYADVIVHRLLAS 876
Query: 626 ALEAEKL 632
AL+ L
Sbjct: 877 ALDLAPL 883
>gi|309800258|ref|ZP_07694434.1| ribonuclease R [Streptococcus infantis SK1302]
gi|308116111|gb|EFO53611.1| ribonuclease R [Streptococcus infantis SK1302]
Length = 780
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 165/523 (31%), Positives = 264/523 (50%), Gaps = 48/523 (9%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ +++ F A VL V G + + +L E+ S F L+
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDAGIDVLEVL-ESMDIVSEFPEAVLNEAES 237
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP ++++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSEKDIEGRLDLRDEITFTIDGADAKDLDDAVHIKSLKNGNFELGVHIADVSYYVT 297
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G V +
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKNGRVRN 357
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I +TVI++ +++Y DI+ G D E E+ +V+SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRQ-------------EYQKIVQSIELMAK 402
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ +IL++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHEILENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRHRGTAERMIESFMLMANETVAE 462
Query: 504 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 563 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 622 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 673
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEVAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEFVGEEYDAV 631
Query: 674 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVK 706
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELSNTVEGLIHITNLPEFYHFNERDLTLRGEK 674
>gi|444405236|ref|ZP_21202152.1| ribonuclease R [Streptococcus pneumoniae PNI0009]
gi|444274907|gb|ELU80547.1| ribonuclease R [Streptococcus pneumoniae PNI0009]
Length = 784
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 164/525 (31%), Positives = 263/525 (50%), Gaps = 46/525 (8%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I +TVI++ +++Y DI+ G D E ++ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRK-------------KYHKIVPSIELMAK 402
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ + L++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHETLENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGIAERMIESFMLMANETVAE 462
Query: 504 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 563 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
D+L R MQ A Y + ++GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 SYA-DVLSMMLLRSMQQARY-------SEHNYGHYGLAADYYTHFTSPIRRYPDLLVHRM 572
Query: 623 LNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--ALS 674
+ ++++ +++P+ N R + + E G E A+
Sbjct: 573 IRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAVV 632
Query: 675 VAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDAC 709
+ +K+G+ + L+++ H N+R L R K
Sbjct: 633 SSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEKSGI 677
>gi|387879985|ref|YP_006310288.1| ribonuclease R [Streptococcus parasanguinis FW213]
gi|386793435|gb|AFJ26470.1| ribonuclease R [Streptococcus parasanguinis FW213]
Length = 786
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 219/413 (53%), Gaps = 29/413 (7%)
Query: 232 GGEVEPQINAI-LYENAICCSGFSPESLSCLPCVPWEVPQEELLSRKDLRNFCIFTIDPS 290
G +P I+ + + E+ S F E L VP +++L R DLR FTID +
Sbjct: 205 GHVTDPGIDVLEVLESMDIVSEFPEEVLKEAEQVPDAPSKKDLEGRLDLREEITFTIDGA 264
Query: 291 TATDLDDALSIERLSDGISRVGVHIADVSYFVLPGTALDIEAQVRSTSVYMLQRKIPMLP 350
A DLDDA+ I+ L +G +GVHIADVSY+V G+ALD EA R+TSVY+ R +PMLP
Sbjct: 265 DAKDLDDAVHIKLLKNGNFELGVHIADVSYYVTEGSALDKEALNRATSVYVTDRVVPMLP 324
Query: 351 VLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVDRWIGRTVIRSCCKLSYEHAQDIIDGKF 410
LS + SLNP VDRL S +++ G VV I +TVI + +++Y DI+ G
Sbjct: 325 ERLSNGICSLNPNVDRLTQSAIMEIDPHGKVVKHTITQTVINTTFRMTYSDVNDILAG-- 382
Query: 411 DVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYEVSKILKDKRFTDGALRLENSKPVFLFD 470
D E + T + +V SI + + IL+ R GAL + ++ L +
Sbjct: 383 DEEKAQT-------------FKKIVPSIHQMATLHGILEGMRIRRGALNFDTNEAKILVN 429
Query: 471 EYGTPYDSVLSGREDLNFLFEEFMLLANKTAAEVIAR-AFPDSALLRRHPAPNMRKLREF 529
+ G P D VL R + E FML+AN+T AE R P + R H P K+++F
Sbjct: 430 KEGKPVDIVLRQRGIAERMIESFMLIANETVAEHFTRLKLP--FIYRIHEDPKAEKVQKF 487
Query: 530 EAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD-YVLFDILINYATRPMQLASYFCSGDF 588
+ S G+Q+ ++S ++L++ K++ + Y D+L R MQ A Y
Sbjct: 488 IDYASSFGIQIYGTASEMSQEALQEIMRKVEGEPYA--DVLSMMLLRSMQQARY------ 539
Query: 589 KDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRTLNAALEAEKLYWKHRRMLP 641
+ + GHY LA YTHFTSP+RRYPDL+VHR + +++++ ++LP
Sbjct: 540 -SEHNHGHYGLAAEFYTHFTSPIRRYPDLMVHRMVREYGKSQEVAEHFEQVLP 591
>gi|418162026|ref|ZP_12798713.1| ribonuclease R [Streptococcus pneumoniae GA17328]
gi|419525722|ref|ZP_14065286.1| ribonuclease R [Streptococcus pneumoniae GA14373]
gi|421236120|ref|ZP_15692721.1| ribonuclease R [Streptococcus pneumoniae 2071004]
gi|353828409|gb|EHE08549.1| ribonuclease R [Streptococcus pneumoniae GA17328]
gi|379559196|gb|EHZ24226.1| ribonuclease R [Streptococcus pneumoniae GA14373]
gi|395605039|gb|EJG65171.1| ribonuclease R [Streptococcus pneumoniae 2071004]
Length = 784
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 166/523 (31%), Positives = 263/523 (50%), Gaps = 48/523 (9%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRK-------------EYHKIVSSIELMAK 402
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ + L++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHETLENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGIAERMIESFMLMANETVAE 462
Query: 504 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 563 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 622 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 673
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 674 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVK 706
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEK 674
>gi|387626327|ref|YP_006062502.1| putative exoribonuclease R [Streptococcus pneumoniae INV104]
gi|417693893|ref|ZP_12343082.1| ribonuclease R [Streptococcus pneumoniae GA47901]
gi|444382159|ref|ZP_21180363.1| ribonuclease R [Streptococcus pneumoniae PCS8106]
gi|444384812|ref|ZP_21182903.1| ribonuclease R [Streptococcus pneumoniae PCS8203]
gi|301794112|emb|CBW36518.1| putative exoribonuclease R [Streptococcus pneumoniae INV104]
gi|332204976|gb|EGJ19041.1| ribonuclease R [Streptococcus pneumoniae GA47901]
gi|444251572|gb|ELU58041.1| ribonuclease R [Streptococcus pneumoniae PCS8203]
gi|444253119|gb|ELU59578.1| ribonuclease R [Streptococcus pneumoniae PCS8106]
Length = 784
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 166/526 (31%), Positives = 263/526 (50%), Gaps = 48/526 (9%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I +TVI++ +++Y DI+ G D E E+ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRK-------------EYHKIVSSIELMAK 402
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ + L++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHETLENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGIAERMIESFMLMANETVAE 462
Query: 504 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 563 -YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHR 621
Y D+L R MQ A Y + + GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 PYA--DVLSMMLLRSMQQARY-------SEHNHGHYGLAADYYTHFTSPIRRYPDLLVHR 571
Query: 622 TLNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--AL 673
+ ++++ +++P+ N R + + E G E A+
Sbjct: 572 MIRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAV 631
Query: 674 SVAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVKDAC 709
+ +K+G+ + L+++ H N+R L R K
Sbjct: 632 VSSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEKSGI 677
>gi|225856633|ref|YP_002738144.1| ribonuclease R [Streptococcus pneumoniae P1031]
gi|444388413|ref|ZP_21186398.1| ribonuclease R [Streptococcus pneumoniae PCS125219]
gi|444389892|ref|ZP_21187807.1| ribonuclease R [Streptococcus pneumoniae PCS70012]
gi|444393374|ref|ZP_21191026.1| ribonuclease R [Streptococcus pneumoniae PCS81218]
gi|444395874|ref|ZP_21193413.1| ribonuclease R [Streptococcus pneumoniae PNI0002]
gi|444397434|ref|ZP_21194917.1| ribonuclease R [Streptococcus pneumoniae PNI0006]
gi|444400525|ref|ZP_21197919.1| ribonuclease R [Streptococcus pneumoniae PNI0007]
gi|444401913|ref|ZP_21199092.1| ribonuclease R [Streptococcus pneumoniae PNI0008]
gi|444408650|ref|ZP_21205283.1| ribonuclease R [Streptococcus pneumoniae PNI0010]
gi|444409446|ref|ZP_21206038.1| ribonuclease R [Streptococcus pneumoniae PNI0076]
gi|444411670|ref|ZP_21207998.1| ribonuclease R [Streptococcus pneumoniae PNI0153]
gi|444415969|ref|ZP_21212183.1| ribonuclease R [Streptococcus pneumoniae PNI0199]
gi|444418608|ref|ZP_21214579.1| ribonuclease R [Streptococcus pneumoniae PNI0360]
gi|444421227|ref|ZP_21216975.1| ribonuclease R [Streptococcus pneumoniae PNI0427]
gi|444422356|ref|ZP_21218013.1| ribonuclease R [Streptococcus pneumoniae PNI0446]
gi|225726254|gb|ACO22106.1| ribonuclease R [Streptococcus pneumoniae P1031]
gi|444249470|gb|ELU55960.1| ribonuclease R [Streptococcus pneumoniae PCS125219]
gi|444255875|gb|ELU62215.1| ribonuclease R [Streptococcus pneumoniae PNI0002]
gi|444256355|gb|ELU62693.1| ribonuclease R [Streptococcus pneumoniae PCS70012]
gi|444260091|gb|ELU66399.1| ribonuclease R [Streptococcus pneumoniae PNI0006]
gi|444261030|gb|ELU67337.1| ribonuclease R [Streptococcus pneumoniae PCS81218]
gi|444266113|gb|ELU72085.1| ribonuclease R [Streptococcus pneumoniae PNI0007]
gi|444267384|gb|ELU73289.1| ribonuclease R [Streptococcus pneumoniae PNI0008]
gi|444269477|gb|ELU75284.1| ribonuclease R [Streptococcus pneumoniae PNI0010]
gi|444275567|gb|ELU81189.1| ribonuclease R [Streptococcus pneumoniae PNI0153]
gi|444278552|gb|ELU83994.1| ribonuclease R [Streptococcus pneumoniae PNI0199]
gi|444279484|gb|ELU84880.1| ribonuclease R [Streptococcus pneumoniae PNI0076]
gi|444281037|gb|ELU86373.1| ribonuclease R [Streptococcus pneumoniae PNI0360]
gi|444282950|gb|ELU88172.1| ribonuclease R [Streptococcus pneumoniae PNI0427]
gi|444288286|gb|ELU93183.1| ribonuclease R [Streptococcus pneumoniae PNI0446]
Length = 784
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 164/522 (31%), Positives = 263/522 (50%), Gaps = 46/522 (8%)
Query: 205 ELVAARIDEW-NEESPFPQAHVLHVFGRGGEVEPQINAILYENAICCSGFSPESLSCLPC 263
E++ ID++ +++ F A VL V G +V + +L E+ S F +
Sbjct: 179 EVLKVFIDKYPSKKHDFFVASVLDVVGHSTDVGIDVLEVL-ESMDIVSEFPEAVVKEAES 237
Query: 264 VPWEVPQEELLSRKDLRNFCIFTIDPSTATDLDDALSIERLSDGISRVGVHIADVSYFVL 323
VP Q+++ R DLR+ FTID + A DLDDA+ I+ L +G +GVHIADVSY+V
Sbjct: 238 VPDAPSQKDMEGRLDLRDEITFTIDGADAKDLDDAVHIKALKNGNLELGVHIADVSYYVT 297
Query: 324 PGTALDIEAQVRSTSVYMLQRKIPMLPVLLSEEVGSLNPGVDRLAFSIFWDLNSAGDVVD 383
G+ALD EA R+TSVY+ R +PMLP LS + SLNP VDRL S +++ G VV+
Sbjct: 298 EGSALDKEALNRATSVYVTDRVVPMLPERLSNGICSLNPQVDRLTQSAIMEIDKHGRVVN 357
Query: 384 RWIGRTVIRSCCKLSYEHAQDIIDGKFDVESSNTLGEGWPQLYGQFEWSDVVRSIKSLYE 443
I +TVI++ +++Y DI+ G D E ++ +V SI+ + +
Sbjct: 358 YTITQTVIKTSFRMTYSDVNDILAG--DEEKRK-------------KYHKIVPSIELMAK 402
Query: 444 VSKILKDKRFTDGALRLENSKPVFLFDEYGTPYDSVLSGREDLNFLFEEFMLLANKTAAE 503
+ + L++ R GAL + ++ L D+ G P D VL R + E FML+AN+T AE
Sbjct: 403 LHETLENMRVKRGALNFDTNEAKILVDKQGKPVDIVLRQRGIAERMIESFMLMANETVAE 462
Query: 504 VIARA-FPDSALLRRHPAPNMRKLREFEAFCSKHGLQLDTSSSGQFHQSLEQAREKLKDD 562
++ P + R H P K+++F + S GL++ ++S ++L+ ++ +
Sbjct: 463 HFSKLDLP--FIYRIHEEPKAEKVQKFIDYASSFGLRIYGTASEISQEALQDIMRAVEGE 520
Query: 563 YVLFDILINYATRPMQLASYFCSGDFKDDTDWGHYALAFPVYTHFTSPLRRYPDLVVHRT 622
D+L R MQ A Y + ++GHY LA YTHFTSP+RRYPDL+VHR
Sbjct: 521 SYA-DVLSMMLLRSMQQARY-------SEHNYGHYGLAADYYTHFTSPIRRYPDLLVHRM 572
Query: 623 LNAALEAEKLYWKHRRMLPK------NNHREGVRGRFLTGIFYDKDAAESLEGRE--ALS 674
+ ++++ +++P+ N R + + E G E A+
Sbjct: 573 IRDYGRSKEIAEHFEQVIPEIATQSSNRERRAIEAEREVEAMKKAEYMEEYVGEEYDAVV 632
Query: 675 VAALKYGV-----PCADILVNVAT-----HCNDRKLACRNVK 706
+ +K+G+ + L+++ H N+R L R K
Sbjct: 633 SSIVKFGLFVELPNTVEGLIHITNLPEFYHFNERDLTLRGEK 674
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,108,008,268
Number of Sequences: 23463169
Number of extensions: 607985405
Number of successful extensions: 1384076
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6138
Number of HSP's successfully gapped in prelim test: 412
Number of HSP's that attempted gapping in prelim test: 1360585
Number of HSP's gapped (non-prelim): 9474
length of query: 880
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 728
effective length of database: 8,792,793,679
effective search space: 6401153798312
effective search space used: 6401153798312
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)